Parus major isolate Abel chromosome 25LG1, Parus_major1.1, whole genome shotgun sequence.
type: Entry
definition: Parus major isolate Abel chromosome 25LG1, Parus_major1.1, whole genome shotgun sequence.
sequence version: NC_031793.1
sequence date: 2020-04-17
sequence: sequence
division: CON
label: NC_031793.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA312399
dblink: SAMN03083587
keyword: WGS
keyword: RefSeq
source: Parus major (Great Tit)
organism: Parus major
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus.
reference: 1
references: 26805030
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003734.1.\nOn Nov 14, 2016 this sequence version replaced NC_029293.1.\nAssembly name: Parus_major1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Animal Breeding and Genomics\nCentre, Wageningen University on 2016/06/30. The original\nwhole-genome shotgun project has the accession JRXK00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Animal Breeding and Genomics Centre,\n Wageningen University\nAssembly Date :: MAY-2013\nAssembly Method :: AllPaths v. April-2013\nAssembly Name :: Parus_major1.0.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 95.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Parus major Annotation Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 1092960
topology: linear
so has quality: SO_0000987
location: 1..1092960
location: region:1-1092960:1
RO_0002162: 9157

NC_031793
type: RefSeq
SIO_000068: refseq

PRJNA312399
type: BioProject
SIO_000068: bioproject

SAMN03083587
type: BioSample
SIO_000068: biosample

1
title: Evolutionary signals of selection on cognition from the great tit genome and methylome
author: Laine, V.N.
author: Gossmann, T.I.
author: Schachtschneider, K.M.
author: Garroway, C.J.
author: Madsen, O.
author: Verhoeven, K.J.
author: de Jager, V.
author: Megens, H.J.
author: Warren, W.C.
author: Minx, P.
author: Crooijmans, R.P.
author: Corcoran, P.
author: Sheldon, B.C.
author: Slate, J.
author: Zeng, K.
author: van Oers, K.
author: Visser, M.E.
author: Groenen, M.A.
journal: Nat Commun 7, 10474 (2016)
pubmed: 26805030

26805030
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092960:1
position: 1092960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1092960:1:source
so part of: sequence
organism: Parus major
mol type: genomic DNA
isolate: Abel
chromosome: 25LG1
sex: male
tissue type: blood
dev stage: 4 year old

9157
type: Taxonomy
SIO_000068: taxonomy

SYT11
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SYT11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(388..4666)
location: region:388-4666:-1
so has part: feature:388-4666:-1:exon
subclass of: SO_0000010

107214519
type: Gene
SIO_000068: ncbigene

position:388:-1
position: 388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4666:-1
position: 4666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:388-4666:-1:exon

SYT11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SYT11
product: synaptotagmin 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033519755.1
SIO_010081: SYT11
subclass of: SO_0000673
so part of: SYT11
location: complement(join(388..1126,3603..4514,4634..4666))
location: region:388-4666:-1
so has part: feature:4634-4666:-1:exon
so has part: feature:3603-4514:-1:exon
so has part: feature:388-1126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4634-4666:-1:exon

position:4634:-1
position: 4634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3603-4514:-1:exon

position:3603:-1
position: 3603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4514:-1
position: 4514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:388-1126:-1:exon

position:1126:-1
position: 1126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SYT11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SYT11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-11
translation: MEMLVMQELGLADPRIESTTGLCRCAARCAGAPARCSLPCLPTDVSPVVAGLIGATVLVVSVSVTVFVWTCCHQQAEKKHKTPPYKFIHMLKGISIYPETLSNKKKINRIRRDKGGAAKEGGRGNLLLDAAESGLMGPNKAPEGPPNIDQLPIKADYGDELSPDQSLTPGGSKTSSPSSPGDDVMLGDLTFSVDYNFPKKALVVTIQEAHGLPVMDEHTQSSDPYIKMTILPDKRHRVKTRVLRKTLEPVFDETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKVQLTREILKRNIQKCISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSGRSYFLQL
SIO_010081: SYT11
subclass of: SO_0000673
so part of: SYT11
location: complement(join(980..1126,3603..4514,4634..4666))
location: region:980-4666:-1
so has part: feature:4634-4666:-1:exon
so has part: feature:3603-4514:-1:exon
so has part: feature:980-1126:-1:exon

XP_033375646.1
type: Protein
SIO_000068: ncbiprotein

position:980:-1
position: 980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4634-4666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3603-4514:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:980-1126:-1:exon

LOC107214567
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8227..36771
location: region:8227-36771:1
so has part: feature:8227-36771:1:exon
subclass of: SO_0000010

107214567
type: Gene
SIO_000068: ncbigene

position:8227:1
position: 8227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36771:1
position: 36771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8227-36771:1:exon

LOC107214567
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214567
product: GON-4-like protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_015650094.3
SIO_010081: LOC107214567
subclass of: SO_0000673
so part of: LOC107214567
location: join(8227..8423,8978..9139,9784..9980,11799..11873,12239..12289,12948..12998,13338..13433,13667..13771,14457..14627,15469..15661,17025..17126,17783..17823,19097..19200,21365..21563,22267..22353,22804..22975,23501..23645,23799..23949,24545..24661,25380..27059,27660..27906,28963..29144,29781..29978,30515..30658,31223..31366,31597..31716,32821..32937,33422..33629,34508..35264,35651..35753,36273..36771)
location: region:8227-36771:1
so has part: feature:8227-8423:1:exon
so has part: feature:8978-9139:1:exon
so has part: feature:9784-9980:1:exon
so has part: feature:11799-11873:1:exon
so has part: feature:12239-12289:1:exon
so has part: feature:12948-12998:1:exon
so has part: feature:13338-13433:1:exon
so has part: feature:13667-13771:1:exon
so has part: feature:14457-14627:1:exon
so has part: feature:15469-15661:1:exon
so has part: feature:17025-17126:1:exon
so has part: feature:17783-17823:1:exon
so has part: feature:19097-19200:1:exon
so has part: feature:21365-21563:1:exon
so has part: feature:22267-22353:1:exon
so has part: feature:22804-22975:1:exon
so has part: feature:23501-23645:1:exon
so has part: feature:23799-23949:1:exon
so has part: feature:24545-24661:1:exon
so has part: feature:25380-27059:1:exon
so has part: feature:27660-27906:1:exon
so has part: feature:28963-29144:1:exon
so has part: feature:29781-29978:1:exon
so has part: feature:30515-30658:1:exon
so has part: feature:31223-31366:1:exon
so has part: feature:31597-31716:1:exon
so has part: feature:32821-32937:1:exon
so has part: feature:33422-33629:1:exon
so has part: feature:34508-35264:1:exon
so has part: feature:35651-35753:1:exon
so has part: feature:36273-36771:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8227-8423:1:exon

position:8423:1
position: 8423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8978-9139:1:exon

position:8978:1
position: 8978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9139:1
position: 9139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9784-9980:1:exon

position:9784:1
position: 9784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9980:1
position: 9980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11799-11873:1:exon

position:11799:1
position: 11799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11873:1
position: 11873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12239-12289:1:exon

position:12239:1
position: 12239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12289:1
position: 12289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12948-12998:1:exon

position:12948:1
position: 12948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12998:1
position: 12998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:13338-13433:1:exon

position:13338:1
position: 13338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13433:1
position: 13433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:13667-13771:1:exon

position:13667:1
position: 13667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13771:1
position: 13771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:14457-14627:1:exon

position:14457:1
position: 14457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14627:1
position: 14627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:15469-15661:1:exon

position:15469:1
position: 15469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15661:1
position: 15661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17025-17126:1:exon

position:17025:1
position: 17025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17126:1
position: 17126
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:17783-17823:1:exon

position:17783:1
position: 17783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17823:1
position: 17823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:19097-19200:1:exon

position:19097:1
position: 19097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19200:1
position: 19200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:21365-21563:1:exon

position:21365:1
position: 21365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21563:1
position: 21563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:22267-22353:1:exon

position:22267:1
position: 22267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22353:1
position: 22353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:22804-22975:1:exon

position:22804:1
position: 22804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22975:1
position: 22975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:23501-23645:1:exon

position:23501:1
position: 23501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23645:1
position: 23645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:23799-23949:1:exon

position:23799:1
position: 23799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23949:1
position: 23949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:24545-24661:1:exon

position:24545:1
position: 24545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24661:1
position: 24661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:25380-27059:1:exon

position:25380:1
position: 25380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27059:1
position: 27059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:27660-27906:1:exon

position:27660:1
position: 27660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27906:1
position: 27906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:28963-29144:1:exon

position:28963:1
position: 28963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29144:1
position: 29144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:29781-29978:1:exon

position:29781:1
position: 29781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29978:1
position: 29978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:30515-30658:1:exon

position:30515:1
position: 30515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30658:1
position: 30658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:31223-31366:1:exon

position:31223:1
position: 31223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31366:1
position: 31366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:31597-31716:1:exon

position:31597:1
position: 31597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31716:1
position: 31716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:32821-32937:1:exon

position:32821:1
position: 32821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32937:1
position: 32937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:33422-33629:1:exon

position:33422:1
position: 33422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33629:1
position: 33629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:34508-35264:1:exon

position:34508:1
position: 34508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35264:1
position: 35264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:35651-35753:1:exon

position:35651:1
position: 35651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35753:1
position: 35753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:36273-36771:1:exon

position:36273:1
position: 36273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214567
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214567
product: GON-4-like protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_015650093.3
SIO_010081: LOC107214567
subclass of: SO_0000673
so part of: LOC107214567
location: join(8461..9139,9784..9980,11799..11873,12239..12289,12948..12998,13338..13433,13667..13771,14457..14627,15469..15661,17025..17126,17783..17823,19097..19200,21365..21563,22267..22353,22804..22975,23501..23645,23799..23949,24545..24661,25380..27059,27660..27906,28963..29144,29781..29978,30515..30658,31223..31366,31597..31716,32821..32937,33422..33629,34520..35264,35651..35753,36273..36771)
location: region:8461-36771:1
so has part: feature:8461-9139:1:exon
so has part: feature:9784-9980:1:exon
so has part: feature:11799-11873:1:exon
so has part: feature:12239-12289:1:exon
so has part: feature:12948-12998:1:exon
so has part: feature:13338-13433:1:exon
so has part: feature:13667-13771:1:exon
so has part: feature:14457-14627:1:exon
so has part: feature:15469-15661:1:exon
so has part: feature:17025-17126:1:exon
so has part: feature:17783-17823:1:exon
so has part: feature:19097-19200:1:exon
so has part: feature:21365-21563:1:exon
so has part: feature:22267-22353:1:exon
so has part: feature:22804-22975:1:exon
so has part: feature:23501-23645:1:exon
so has part: feature:23799-23949:1:exon
so has part: feature:24545-24661:1:exon
so has part: feature:25380-27059:1:exon
so has part: feature:27660-27906:1:exon
so has part: feature:28963-29144:1:exon
so has part: feature:29781-29978:1:exon
so has part: feature:30515-30658:1:exon
so has part: feature:31223-31366:1:exon
so has part: feature:31597-31716:1:exon
so has part: feature:32821-32937:1:exon
so has part: feature:33422-33629:1:exon
so has part: feature:34520-35264:1:exon
so has part: feature:35651-35753:1:exon
so has part: feature:36273-36771:1:exon

position:8461:1
position: 8461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8461-9139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9784-9980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11799-11873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12239-12289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12948-12998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13338-13433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13667-13771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14457-14627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15469-15661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17025-17126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17783-17823:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19097-19200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:21365-21563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22267-22353:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22804-22975:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:23501-23645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:23799-23949:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:24545-24661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:25380-27059:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:27660-27906:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28963-29144:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:29781-29978:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:30515-30658:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:31223-31366:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:31597-31716:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:32821-32937:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:33422-33629:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:34520-35264:1:exon

position:34520:1
position: 34520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:35651-35753:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36273-36771:1:exon

LOC107214567
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214567
product: GON-4-like protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_015650092.3
SIO_010081: LOC107214567
subclass of: SO_0000673
so part of: LOC107214567
location: join(8462..9139,9784..9980,11799..11873,12239..12289,12948..12998,13338..13433,13667..13771,14457..14627,15469..15661,17025..17126,17783..17823,19097..19200,21365..21563,22267..22353,22804..22975,23501..23645,23799..23949,24545..24661,25380..27059,27660..27906,28963..29144,29781..29978,30515..30658,31223..31366,31597..31716,32821..32937,33422..33629,34508..35264,35651..35753,36273..36771)
location: region:8462-36771:1
so has part: feature:8462-9139:1:exon
so has part: feature:9784-9980:1:exon
so has part: feature:11799-11873:1:exon
so has part: feature:12239-12289:1:exon
so has part: feature:12948-12998:1:exon
so has part: feature:13338-13433:1:exon
so has part: feature:13667-13771:1:exon
so has part: feature:14457-14627:1:exon
so has part: feature:15469-15661:1:exon
so has part: feature:17025-17126:1:exon
so has part: feature:17783-17823:1:exon
so has part: feature:19097-19200:1:exon
so has part: feature:21365-21563:1:exon
so has part: feature:22267-22353:1:exon
so has part: feature:22804-22975:1:exon
so has part: feature:23501-23645:1:exon
so has part: feature:23799-23949:1:exon
so has part: feature:24545-24661:1:exon
so has part: feature:25380-27059:1:exon
so has part: feature:27660-27906:1:exon
so has part: feature:28963-29144:1:exon
so has part: feature:29781-29978:1:exon
so has part: feature:30515-30658:1:exon
so has part: feature:31223-31366:1:exon
so has part: feature:31597-31716:1:exon
so has part: feature:32821-32937:1:exon
so has part: feature:33422-33629:1:exon
so has part: feature:34508-35264:1:exon
so has part: feature:35651-35753:1:exon
so has part: feature:36273-36771:1:exon

position:8462:1
position: 8462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8462-9139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9784-9980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11799-11873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12239-12289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12948-12998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13338-13433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13667-13771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14457-14627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15469-15661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17025-17126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17783-17823:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19097-19200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:21365-21563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22267-22353:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22804-22975:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:23501-23645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:23799-23949:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:24545-24661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:25380-27059:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:27660-27906:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28963-29144:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:29781-29978:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:30515-30658:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:31223-31366:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:31597-31716:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:32821-32937:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:33422-33629:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:34508-35264:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:35651-35753:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36273-36771:1:exon

LOC107214567
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GON-4-like protein isoform X1
translation: MELLLPCALAEFIRFDVFGWEIQWKMNLLGFSVAHTGVLSLLCVSLWCAWLQLGVLFPGKIPKLYTEVEVNSQRDPYPSESPGAVPESPGRSSLQVAARNPTMMKPPKNTRAEEQDGEDVERRKRRRKATKRKREGKGLEEEGSLSCDIKLDESLDRTLEDGAKQHNLTVVNVRNILHEVITNEHVVAMMKAAISETEDIPLFEPKMTRSKLKEVVEKGGVIPTWNISPIKKANEMKPPQFVDIPLEEDDSSDEEYQPDDEDEDETAEESLLESDVESTASSPRGAKRSRTRRSSDEEGGTLCEMEKVTTPVVRHISAEVVPMGPPPPPKPKQSKDSTFMEKLHAVDEELASSPVCMDSYQPLEDSLIAFRTRSKRPLKDVPLGQLEAELRAPDITPDMYDPNTADDEEWKRWLGGLMNDDVENEDEADDDDDPEYNFLEDLDEPDTEDFRNDRAVRITKKEVNELMEELFETFQDEMGFSNMEDEGLEDDDVVTESRPNFNTPQALRFEEPLANLLNKQHRTVKEQLEQLRMKKSSIKTPPESEKSKPPNEKPLQSLVLDSAQRKRLQQQMQQHVQLLTQIHLLASFNPALSSEASTTRMFLSELGSFARSSTLLRVPLNPKFQTMFQPCNLQGALQLIEDFHAQVPVDWSPRKAVKKNASEFSCLPKQVAWILATRKVFMYPELLPICSLRANSHRDKMVFTKAEDNLLALGLKHFEGTDFPKPLISKYLLPTKTAHQLTVRIKNLNMNRAPDNIIRYYRKTKQLPVLVKCCEEIQPHEWKPPVEREEHRLPFWLKASLPSIQGELKQLAEDAKETPASPDAESVLLGTEEETSDMECDDKYPLLMPKGLVLTLKPLANRFSRRAWRRQRSSSLKPVLIRPSPCLQPSSSPISIQKTVKLSQSEAPPSKVRVKVPRPIKPAPVVPAVQPVNVPAALGGGDGLEFQNVLPTAHPDSKQAYPAAVSPALVSSEPLTCQPKLMLPALAGTKMRKPCVRKGYQRKKGTRSAPLIKPSPLIQPSPVILTVPATTVKVVNIGNGCNMIQPLSAAVGRGTQAIPVTTLLVNPSTFPCPLNQPLVTSSIPSLIVSPNPVGLSAPAVGEGEEQLTLVSAPGAFPAAEPKPEPPELLAPCSAVTPKEECGANPATSHEGTQDKGSKGDCCSWAVGQGDGNTSEPLPVELLPHLEDPDKSVKIEPEDSSDAPKEAQKRDLLCAEGKEEFMLGLGQELNMEAACSCGDEPKKEEKGEEERRTLPSPPQGEQQGEAGPAAGPPASSDSPKNLPYPAEGEAEFSSPPGRPEDSSSIDGQSVGTPAGPEAAGEREGQEEEEEDDFDDFTQDEDEEMSSASEESILSVPELQETMEKLTWLATERRLSQEGDSEEENSQEENSEPEEEEEEEGEGIESLQKDDEICGDVSEEPKSAFTMAKAASPQVEAHRMPAGENLKPPGKSRSSHRTRSKRGRARASKDTSKLLLLYDEDILERDPLREQKDLAFAQAYLSRVRETLQHIPGKYEDFLRVIYEFEISTDKRTAVDLYATLQKLLHDWPQLLTDFAAFLLPEQALECGLFEEQQAFEKSRKFLRQLEICFAENPAHHQKIIKVLQSCADCLPQEIAELKTQMWQLLKGHDHLQDEFSVFFDHLRPSASRMGDFEEINWTEEKEYEFDGFEEVSLPDVEEEDEPPKIHGATRNKKRKEIGGQQQDKEVEWVDNGMKECSCSCHEGSSDLKLKKSKRRSCSHCGSKVCENKFYKNKDSQELPASLAQREPSPQPEGKDPGMSKEPGEESLESRDEGEGVQSRTKPVSRKVDSLAPGFFPGSQLEGRVASSRAESCEKPAPEGASAGVDAARDGDSAATGPRWAQLQKAALKLPQETKDCPCTEGLKQPGGDAEASLGLSRDLLLSAAAKASPAPRASCARSPCQTEGLHPAAAQQPRGSALTSAGGKDLEGPPLPLEGRAEAKQGWITTSSKAAASESCGSGSSPSGCGLEPEDRGCTGDAPEG…
SIO_010081: LOC107214567
subclass of: SO_0000673
so part of: LOC107214567
location: join(8803..9139,9784..9980,11799..11873,12239..12289,12948..12998,13338..13433,13667..13771,14457..14627,15469..15661,17025..17126,17783..17823,19097..19200,21365..21563,22267..22353,22804..22975,23501..23645,23799..23949,24545..24661,25380..27059,27660..27906,28963..29144,29781..29978,30515..30658,31223..31366,31597..31716,32821..32937,33422..33629,34508..35264,35651..35753,36273..36422)
location: region:8803-36422:1
so has part: feature:8803-9139:1:exon
so has part: feature:9784-9980:1:exon
so has part: feature:11799-11873:1:exon
so has part: feature:12239-12289:1:exon
so has part: feature:12948-12998:1:exon
so has part: feature:13338-13433:1:exon
so has part: feature:13667-13771:1:exon
so has part: feature:14457-14627:1:exon
so has part: feature:15469-15661:1:exon
so has part: feature:17025-17126:1:exon
so has part: feature:17783-17823:1:exon
so has part: feature:19097-19200:1:exon
so has part: feature:21365-21563:1:exon
so has part: feature:22267-22353:1:exon
so has part: feature:22804-22975:1:exon
so has part: feature:23501-23645:1:exon
so has part: feature:23799-23949:1:exon
so has part: feature:24545-24661:1:exon
so has part: feature:25380-27059:1:exon
so has part: feature:27660-27906:1:exon
so has part: feature:28963-29144:1:exon
so has part: feature:29781-29978:1:exon
so has part: feature:30515-30658:1:exon
so has part: feature:31223-31366:1:exon
so has part: feature:31597-31716:1:exon
so has part: feature:32821-32937:1:exon
so has part: feature:33422-33629:1:exon
so has part: feature:34508-35264:1:exon
so has part: feature:35651-35753:1:exon
so has part: feature:36273-36422:1:exon

XP_015505578.1
type: Protein
SIO_000068: ncbiprotein

position:8803:1
position: 8803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36422:1
position: 36422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8803-9139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9784-9980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11799-11873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12239-12289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12948-12998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13338-13433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13667-13771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14457-14627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15469-15661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17025-17126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17783-17823:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19097-19200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:21365-21563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22267-22353:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22804-22975:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:23501-23645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:23799-23949:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:24545-24661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:25380-27059:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:27660-27906:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28963-29144:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:29781-29978:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:30515-30658:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:31223-31366:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:31597-31716:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:32821-32937:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:33422-33629:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:34508-35264:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:35651-35753:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36273-36422:1:exon

LOC107214567
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GON-4-like protein isoform X2
translation: MELLLPCALAEFIRFDVFGWEIQWKMNLLGFSVAHTGVLSLLCVSLWCAWLQLGVLFPGKIPKLYTEVEVNSQRDPYPSESPGAVPESPGRSSLQVAARNPTMMKPPKNTRAEEQDGEDVERRKRRRKATKRKREGKGLEEEGSLSCDIKLDESLDRTLEDGAKQHNLTVVNVRNILHEVITNEHVVAMMKAAISETEDIPLFEPKMTRSKLKEVVEKGGVIPTWNISPIKKANEMKPPQFVDIPLEEDDSSDEEYQPDDEDEDETAEESLLESDVESTASSPRGAKRSRTRRSSDEEGGTLCEMEKVTTPVVRHISAEVVPMGPPPPPKPKQSKDSTFMEKLHAVDEELASSPVCMDSYQPLEDSLIAFRTRSKRPLKDVPLGQLEAELRAPDITPDMYDPNTADDEEWKRWLGGLMNDDVENEDEADDDDDPEYNFLEDLDEPDTEDFRNDRAVRITKKEVNELMEELFETFQDEMGFSNMEDEGLEDDDVVTESRPNFNTPQALRFEEPLANLLNKQHRTVKEQLEQLRMKKSSIKTPPESEKSKPPNEKPLQSLVLDSAQRKRLQQQMQQHVQLLTQIHLLASFNPALSSEASTTRMFLSELGSFARSSTLLRVPLNPKFQTMFQPCNLQGALQLIEDFHAQVPVDWSPRKAVKKNASEFSCLPKQVAWILATRKVFMYPELLPICSLRANSHRDKMVFTKAEDNLLALGLKHFEGTDFPKPLISKYLLPTKTAHQLTVRIKNLNMNRAPDNIIRYYRKTKQLPVLVKCCEEIQPHEWKPPVEREEHRLPFWLKASLPSIQGELKQLAEDAKETPASPDAESVLLGTEEETSDMECDDKYPLLMPKGLVLTLKPLANRFSRRAWRRQRSSSLKPVLIRPSPCLQPSSSPISIQKTVKLSQSEAPPSKVRVKVPRPIKPAPVVPAVQPVNVPAALGGGDGLEFQNVLPTAHPDSKQAYPAAVSPALVSSEPLTCQPKLMLPALAGTKMRKPCVRKGYQRKKGTRSAPLIKPSPLIQPSPVILTVPATTVKVVNIGNGCNMIQPLSAAVGRGTQAIPVTTLLVNPSTFPCPLNQPLVTSSIPSLIVSPNPVGLSAPAVGEGEEQLTLVSAPGAFPAAEPKPEPPELLAPCSAVTPKEECGANPATSHEGTQDKGSKGDCCSWAVGQGDGNTSEPLPVELLPHLEDPDKSVKIEPEDSSDAPKEAQKRDLLCAEGKEEFMLGLGQELNMEAACSCGDEPKKEEKGEEERRTLPSPPQGEQQGEAGPAAGPPASSDSPKNLPYPAEGEAEFSSPPGRPEDSSSIDGQSVGTPAGPEAAGEREGQEEEEEDDFDDFTQDEDEEMSSASEESILSVPELQETMEKLTWLATERRLSQEGDSEEENSQEENSEPEEEEEEEGEGIESLQKDDEICGDVSEEPKSAFTMAKAASPQVEAHRMPAGENLKPPGKSRSSHRTRSKRGRARASKDTSKLLLLYDEDILERDPLREQKDLAFAQAYLSRVRETLQHIPGKYEDFLRVIYEFEISTDKRTAVDLYATLQKLLHDWPQLLTDFAAFLLPEQALECGLFEEQQAFEKSRKFLRQLEICFAENPAHHQKIIKVLQSCADCLPQEIAELKTQMWQLLKGHDHLQDEFSVFFDHLRPSASRMGDFEEINWTEEKEYEFDGFEEVSLPDVEEEDEPPKIHGATRNKKRKEIGGQQQDKEVEWVDNGMKECSCSCHEGSSDLKLKKSKRRSCSHCGSKVCENKFYKNKDSQELPASLAQREPSPQPEGKDPGMSKEPGEESLESRDEGEGVQSRTKPVSRKVDSLAPGSQLEGRVASSRAESCEKPAPEGASAGVDAARDGDSAATGPRWAQLQKAALKLPQETKDCPCTEGLKQPGGDAEASLGLSRDLLLSAAAKASPAPRASCARSPCQTEGLHPAAAQQPRGSALTSAGGKDLEGPPLPLEGRAEAKQGWITTSSKAAASESCGSGSSPSGCGLEPEDRGCTGDAPEGRPRS…
SIO_010081: LOC107214567
subclass of: SO_0000673
so part of: LOC107214567
location: join(8803..9139,9784..9980,11799..11873,12239..12289,12948..12998,13338..13433,13667..13771,14457..14627,15469..15661,17025..17126,17783..17823,19097..19200,21365..21563,22267..22353,22804..22975,23501..23645,23799..23949,24545..24661,25380..27059,27660..27906,28963..29144,29781..29978,30515..30658,31223..31366,31597..31716,32821..32937,33422..33629,34520..35264,35651..35753,36273..36422)
location: region:8803-36422:1
so has part: feature:8803-9139:1:exon
so has part: feature:9784-9980:1:exon
so has part: feature:11799-11873:1:exon
so has part: feature:12239-12289:1:exon
so has part: feature:12948-12998:1:exon
so has part: feature:13338-13433:1:exon
so has part: feature:13667-13771:1:exon
so has part: feature:14457-14627:1:exon
so has part: feature:15469-15661:1:exon
so has part: feature:17025-17126:1:exon
so has part: feature:17783-17823:1:exon
so has part: feature:19097-19200:1:exon
so has part: feature:21365-21563:1:exon
so has part: feature:22267-22353:1:exon
so has part: feature:22804-22975:1:exon
so has part: feature:23501-23645:1:exon
so has part: feature:23799-23949:1:exon
so has part: feature:24545-24661:1:exon
so has part: feature:25380-27059:1:exon
so has part: feature:27660-27906:1:exon
so has part: feature:28963-29144:1:exon
so has part: feature:29781-29978:1:exon
so has part: feature:30515-30658:1:exon
so has part: feature:31223-31366:1:exon
so has part: feature:31597-31716:1:exon
so has part: feature:32821-32937:1:exon
so has part: feature:33422-33629:1:exon
so has part: feature:34520-35264:1:exon
so has part: feature:35651-35753:1:exon
so has part: feature:36273-36422:1:exon

XP_015505579.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8803-9139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9784-9980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11799-11873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12239-12289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12948-12998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13338-13433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13667-13771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14457-14627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15469-15661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17025-17126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17783-17823:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19097-19200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:21365-21563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22267-22353:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22804-22975:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:23501-23645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:23799-23949:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:24545-24661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:25380-27059:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:27660-27906:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28963-29144:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:29781-29978:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:30515-30658:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:31223-31366:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:31597-31716:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:32821-32937:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:33422-33629:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:34520-35264:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:35651-35753:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36273-36422:1:exon

LOC107214567
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GON-4-like protein isoform X3
translation: MMKPPKNTRAEEQDGEDVERRKRRRKATKRKREGKGLEEEGSLSCDIKLDESLDRTLEDGAKQHNLTVVNVRNILHEVITNEHVVAMMKAAISETEDIPLFEPKMTRSKLKEVVEKGGVIPTWNISPIKKANEMKPPQFVDIPLEEDDSSDEEYQPDDEDEDETAEESLLESDVESTASSPRGAKRSRTRRSSDEEGGTLCEMEKVTTPVVRHISAEVVPMGPPPPPKPKQSKDSTFMEKLHAVDEELASSPVCMDSYQPLEDSLIAFRTRSKRPLKDVPLGQLEAELRAPDITPDMYDPNTADDEEWKRWLGGLMNDDVENEDEADDDDDPEYNFLEDLDEPDTEDFRNDRAVRITKKEVNELMEELFETFQDEMGFSNMEDEGLEDDDVVTESRPNFNTPQALRFEEPLANLLNKQHRTVKEQLEQLRMKKSSIKTPPESEKSKPPNEKPLQSLVLDSAQRKRLQQQMQQHVQLLTQIHLLASFNPALSSEASTTRMFLSELGSFARSSTLLRVPLNPKFQTMFQPCNLQGALQLIEDFHAQVPVDWSPRKAVKKNASEFSCLPKQVAWILATRKVFMYPELLPICSLRANSHRDKMVFTKAEDNLLALGLKHFEGTDFPKPLISKYLLPTKTAHQLTVRIKNLNMNRAPDNIIRYYRKTKQLPVLVKCCEEIQPHEWKPPVEREEHRLPFWLKASLPSIQGELKQLAEDAKETPASPDAESVLLGTEEETSDMECDDKYPLLMPKGLVLTLKPLANRFSRRAWRRQRSSSLKPVLIRPSPCLQPSSSPISIQKTVKLSQSEAPPSKVRVKVPRPIKPAPVVPAVQPVNVPAALGGGDGLEFQNVLPTAHPDSKQAYPAAVSPALVSSEPLTCQPKLMLPALAGTKMRKPCVRKGYQRKKGTRSAPLIKPSPLIQPSPVILTVPATTVKVVNIGNGCNMIQPLSAAVGRGTQAIPVTTLLVNPSTFPCPLNQPLVTSSIPSLIVSPNPVGLSAPAVGEGEEQLTLVSAPGAFPAAEPKPEPPELLAPCSAVTPKEECGANPATSHEGTQDKGSKGDCCSWAVGQGDGNTSEPLPVELLPHLEDPDKSVKIEPEDSSDAPKEAQKRDLLCAEGKEEFMLGLGQELNMEAACSCGDEPKKEEKGEEERRTLPSPPQGEQQGEAGPAAGPPASSDSPKNLPYPAEGEAEFSSPPGRPEDSSSIDGQSVGTPAGPEAAGEREGQEEEEEDDFDDFTQDEDEEMSSASEESILSVPELQETMEKLTWLATERRLSQEGDSEEENSQEENSEPEEEEEEEGEGIESLQKDDEICGDVSEEPKSAFTMAKAASPQVEAHRMPAGENLKPPGKSRSSHRTRSKRGRARASKDTSKLLLLYDEDILERDPLREQKDLAFAQAYLSRVRETLQHIPGKYEDFLRVIYEFEISTDKRTAVDLYATLQKLLHDWPQLLTDFAAFLLPEQALECGLFEEQQAFEKSRKFLRQLEICFAENPAHHQKIIKVLQSCADCLPQEIAELKTQMWQLLKGHDHLQDEFSVFFDHLRPSASRMGDFEEINWTEEKEYEFDGFEEVSLPDVEEEDEPPKIHGATRNKKRKEIGGQQQDKEVEWVDNGMKECSCSCHEGSSDLKLKKSKRRSCSHCGSKVCENKFYKNKDSQELPASLAQREPSPQPEGKDPGMSKEPGEESLESRDEGEGVQSRTKPVSRKVDSLAPGFFPGSQLEGRVASSRAESCEKPAPEGASAGVDAARDGDSAATGPRWAQLQKAALKLPQETKDCPCTEGLKQPGGDAEASLGLSRDLLLSAAAKASPAPRASCARSPCQTEGLHPAAAQQPRGSALTSAGGKDLEGPPLPLEGRAEAKQGWITTSSKAAASESCGSGSSPSGCGLEPEDRGCTGDAPEGRPRSNASSCFQVHQHPEQLEPRAGTASPGQREEEQQQQRVTEATVCAKNSKVSSTGEKVVLWTREADRVILTTCQEKGAHLDTFHAISQKLGNKTASEVSHR…
SIO_010081: LOC107214567
subclass of: SO_0000673
so part of: LOC107214567
location: join(9109..9139,9784..9980,11799..11873,12239..12289,12948..12998,13338..13433,13667..13771,14457..14627,15469..15661,17025..17126,17783..17823,19097..19200,21365..21563,22267..22353,22804..22975,23501..23645,23799..23949,24545..24661,25380..27059,27660..27906,28963..29144,29781..29978,30515..30658,31223..31366,31597..31716,32821..32937,33422..33629,34508..35264,35651..35753,36273..36422)
location: region:9109-36422:1
so has part: feature:9109-9139:1:exon
so has part: feature:9784-9980:1:exon
so has part: feature:11799-11873:1:exon
so has part: feature:12239-12289:1:exon
so has part: feature:12948-12998:1:exon
so has part: feature:13338-13433:1:exon
so has part: feature:13667-13771:1:exon
so has part: feature:14457-14627:1:exon
so has part: feature:15469-15661:1:exon
so has part: feature:17025-17126:1:exon
so has part: feature:17783-17823:1:exon
so has part: feature:19097-19200:1:exon
so has part: feature:21365-21563:1:exon
so has part: feature:22267-22353:1:exon
so has part: feature:22804-22975:1:exon
so has part: feature:23501-23645:1:exon
so has part: feature:23799-23949:1:exon
so has part: feature:24545-24661:1:exon
so has part: feature:25380-27059:1:exon
so has part: feature:27660-27906:1:exon
so has part: feature:28963-29144:1:exon
so has part: feature:29781-29978:1:exon
so has part: feature:30515-30658:1:exon
so has part: feature:31223-31366:1:exon
so has part: feature:31597-31716:1:exon
so has part: feature:32821-32937:1:exon
so has part: feature:33422-33629:1:exon
so has part: feature:34508-35264:1:exon
so has part: feature:35651-35753:1:exon
so has part: feature:36273-36422:1:exon

XP_015505580.1
type: Protein
SIO_000068: ncbiprotein

position:9109:1
position: 9109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9109-9139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9784-9980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11799-11873:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12239-12289:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12948-12998:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13338-13433:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:13667-13771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:14457-14627:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15469-15661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:17025-17126:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17783-17823:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:19097-19200:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:21365-21563:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:22267-22353:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:22804-22975:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:23501-23645:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:23799-23949:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:24545-24661:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:25380-27059:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:27660-27906:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:28963-29144:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:29781-29978:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:30515-30658:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:31223-31366:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:31597-31716:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:32821-32937:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:33422-33629:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:34508-35264:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:35651-35753:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:36273-36422:1:exon

MSTO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MSTO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(36828..41157)
location: region:36828-41157:-1
so has part: feature:36828-41157:-1:exon
subclass of: SO_0000010

107214520
type: Gene
SIO_000068: ncbigene

position:36828:-1
position: 36828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41157:-1
position: 41157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36828-41157:-1:exon

MSTO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MSTO1
product: misato mitochondrial distribution and morphology regulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015650006.1
SIO_010081: MSTO1
subclass of: SO_0000673
so part of: MSTO1
location: complement(join(36828..37522,37750..37868,37948..38046,38236..38420,38512..38643,39153..39305,39404..39538,39640..39757,39852..39966,40190..40238,40312..40413,41083..41157))
location: region:36828-41157:-1
so has part: feature:41083-41157:-1:exon
so has part: feature:40312-40413:-1:exon
so has part: feature:40190-40238:-1:exon
so has part: feature:39852-39966:-1:exon
so has part: feature:39640-39757:-1:exon
so has part: feature:39404-39538:-1:exon
so has part: feature:39153-39305:-1:exon
so has part: feature:38512-38643:-1:exon
so has part: feature:38236-38420:-1:exon
so has part: feature:37948-38046:-1:exon
so has part: feature:37750-37868:-1:exon
so has part: feature:36828-37522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41083-41157:-1:exon

position:41083:-1
position: 41083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40312-40413:-1:exon

position:40312:-1
position: 40312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40413:-1
position: 40413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:40190-40238:-1:exon

position:40190:-1
position: 40190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40238:-1
position: 40238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39852-39966:-1:exon

position:39852:-1
position: 39852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39966:-1
position: 39966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39640-39757:-1:exon

position:39640:-1
position: 39640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39757:-1
position: 39757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:39404-39538:-1:exon

position:39404:-1
position: 39404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39538:-1
position: 39538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:39153-39305:-1:exon

position:39153:-1
position: 39153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39305:-1
position: 39305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:38512-38643:-1:exon

position:38512:-1
position: 38512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38643:-1
position: 38643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:38236-38420:-1:exon

position:38236:-1
position: 38236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38420:-1
position: 38420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:37948-38046:-1:exon

position:37948:-1
position: 37948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:38046:-1
position: 38046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:37750-37868:-1:exon

position:37750:-1
position: 37750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:37868:-1
position: 37868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:36828-37522:-1:exon

position:37522:-1
position: 37522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSTO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MSTO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein misato homolog 1
translation: MPGEAVTLQLGHYSGCVGAHWWGLQGRDGDTAAAAALCRRDGPVADYRDCAPGDTGNRRGDAAGDGKGNPGAARTGAAPVGSQDAPSVRLWSDYLNVQLHPKSVYVIRQYLHDGDCDCLEAFGQGESLLQDPACVEELEDRLHFYVEECDYLQGFQVLCDLHNGFSGVGAKVTELLHDEYSRKGILTWGLTPVLSAVADPQNSFYRLMNTALGIAHLSRHSSLFCPLSLSGSLGIKPEAPVTFPYIKYEASLNYHSSAILAAALDTLTAPYRLWSSQGSMMHFADSLTFSGRKVVAAWAALPFPALPGSSLPEILSAHQQDLPWKLLSSWREQKVSCCFAQSVVLRGICQEKPTSSCPGQPRSPLHRCESPEEVLQQFLHTQFPGAFSTAHVLQQPCDTRPPFPQFFSPLLTRRGFLLDKAQGYSSAGVESIPVLAALQSCPGLHSLLWGLCRELRAPSARRWGSSGTAGLEHDDFQEALEELKTLAQCYEMGFGADGSEDEADSD
SIO_010081: MSTO1
subclass of: SO_0000673
so part of: MSTO1
location: complement(join(37284..37522,37750..37868,37948..38046,38236..38420,38512..38643,39153..39305,39404..39538,39640..39757,39852..39966,40190..40238,40312..40413,41083..41157))
location: region:37284-41157:-1
so has part: feature:41083-41157:-1:exon
so has part: feature:40312-40413:-1:exon
so has part: feature:40190-40238:-1:exon
so has part: feature:39852-39966:-1:exon
so has part: feature:39640-39757:-1:exon
so has part: feature:39404-39538:-1:exon
so has part: feature:39153-39305:-1:exon
so has part: feature:38512-38643:-1:exon
so has part: feature:38236-38420:-1:exon
so has part: feature:37948-38046:-1:exon
so has part: feature:37750-37868:-1:exon
so has part: feature:37284-37522:-1:exon

XP_015505492.1
type: Protein
SIO_000068: ncbiprotein

position:37284:-1
position: 37284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41083-41157:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40312-40413:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:40190-40238:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39852-39966:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39640-39757:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39404-39538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:39153-39305:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:38512-38643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:38236-38420:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:37948-38046:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:37750-37868:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:37284-37522:-1:exon

DAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: DAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41291..57058)
location: region:41291-57058:-1
so has part: feature:41291-57058:-1:exon
subclass of: SO_0000010

107214521
type: Gene
SIO_000068: ncbigene

position:41291:-1
position: 41291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57058:-1
position: 57058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41291-57058:-1:exon

DAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DAP3
product: death associated protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019008940.1
SIO_010081: DAP3
subclass of: SO_0000673
so part of: DAP3
location: complement(join(41291..41405,41501..41618,42330..42419,43476..43535,44349..44507,44877..44957,45136..45266,46116..46208,47276..47384,48208..48327,51833..51919,56078..56123,56886..57058))
location: region:41291-57058:-1
so has part: feature:56886-57058:-1:exon
so has part: feature:56078-56123:-1:exon
so has part: feature:51833-51919:-1:exon
so has part: feature:48208-48327:-1:exon
so has part: feature:47276-47384:-1:exon
so has part: feature:46116-46208:-1:exon
so has part: feature:45136-45266:-1:exon
so has part: feature:44877-44957:-1:exon
so has part: feature:44349-44507:-1:exon
so has part: feature:43476-43535:-1:exon
so has part: feature:42330-42419:-1:exon
so has part: feature:41501-41618:-1:exon
so has part: feature:41291-41405:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:56886-57058:-1:exon

position:56886:-1
position: 56886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:56078-56123:-1:exon

position:56078:-1
position: 56078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56123:-1
position: 56123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:51833-51919:-1:exon

position:51833:-1
position: 51833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51919:-1
position: 51919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48208-48327:-1:exon

position:48208:-1
position: 48208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48327:-1
position: 48327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:47276-47384:-1:exon

position:47276:-1
position: 47276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47384:-1
position: 47384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:46116-46208:-1:exon

position:46116:-1
position: 46116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:46208:-1
position: 46208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:45136-45266:-1:exon

position:45136:-1
position: 45136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45266:-1
position: 45266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:44877-44957:-1:exon

position:44877:-1
position: 44877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44957:-1
position: 44957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:44349-44507:-1:exon

position:44349:-1
position: 44349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:44507:-1
position: 44507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:43476-43535:-1:exon

position:43476:-1
position: 43476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:43535:-1
position: 43535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:42330-42419:-1:exon

position:42330:-1
position: 42330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42419:-1
position: 42419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:41501-41618:-1:exon

position:41501:-1
position: 41501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:41618:-1
position: 41618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:41291-41405:-1:exon

position:41405:-1
position: 41405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S29, mitochondrial
translation: MNSVFTAFPVGLFPLPAVTGGNVVFVQVKQLCLAVLQVTTPPSEAAAPPEESRKMLRSLKGLVCRSLKLDRGCALHTAARDGLSSVSSQDVPAERPRFPFSPQAKHTEQHEARLYNIPLEEVKAVFPHGLPHRFQQQIQTFNEARVMVRKPALELLAYLRGSNFAHPAVRYVIYGERGTGKTMTLCHVLHYCSRQGWLVLHIPDAHLWVKNCKELLQSSYKKDRLDQPLQASVWLKNFKTSNERFLQEIKTQKKYMWGKQESTEEGRPLGEVVEQGLARVRSATDAVGVVLREIKQQSHRGSFRLLVAVDGVNALWGRTTLRKEDKSPVSPGELTLVHNLRKMLRNDWSGGAIVTTLSQTGSLFKPSSAYTPQELLGKEGFDALDPFVPISVPNYSPREFESCYGYYLERKWLQHEKAHTEDGKAELRFLSGSNPRQLDRLAGPL
SIO_010081: DAP3
subclass of: SO_0000673
so part of: DAP3
location: complement(join(41320..41405,41501..41618,42330..42419,43476..43535,44349..44507,44877..44957,45136..45266,46116..46208,47276..47384,48208..48327,51833..51919,56078..56123,56886..57043))
location: region:41320-57043:-1
so has part: feature:56886-57043:-1:exon
so has part: feature:56078-56123:-1:exon
so has part: feature:51833-51919:-1:exon
so has part: feature:48208-48327:-1:exon
so has part: feature:47276-47384:-1:exon
so has part: feature:46116-46208:-1:exon
so has part: feature:45136-45266:-1:exon
so has part: feature:44877-44957:-1:exon
so has part: feature:44349-44507:-1:exon
so has part: feature:43476-43535:-1:exon
so has part: feature:42330-42419:-1:exon
so has part: feature:41501-41618:-1:exon
so has part: feature:41320-41405:-1:exon

XP_018864485.1
type: Protein
SIO_000068: ncbiprotein

position:41320:-1
position: 41320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57043:-1
position: 57043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56886-57043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56078-56123:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:51833-51919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48208-48327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47276-47384:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46116-46208:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:45136-45266:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:44877-44957:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:44349-44507:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:43476-43535:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:42330-42419:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:41501-41618:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:41320-41405:-1:exon

ASH1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ASH1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 60286..120516
location: region:60286-120516:1
so has part: feature:60286-120516:1:exon
subclass of: SO_0000010

107214568
type: Gene
SIO_000068: ncbigene

position:60286:1
position: 60286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120516:1
position: 120516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60286-120516:1:exon

ASH1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ASH1L
product: ASH1 like histone lysine methyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033519731.1
SIO_010081: ASH1L
subclass of: SO_0000673
so part of: ASH1L
location: join(60286..60384,66971..67490,79163..83906,88458..88559,91614..92346,93291..93470,96021..96115,99223..99296,100839..100884,101117..101225,103525..103731,105310..105456,106689..106797,106973..107134,107364..107458,107707..107864,108901..109059,109463..109517,109612..109744,111473..111721,112495..112581,112813..112903,114223..114361,114849..115021,115671..115837,117331..117554)
location: region:60286-117554:1
so has part: feature:60286-60384:1:exon
so has part: feature:66971-67490:1:exon
so has part: feature:79163-83906:1:exon
so has part: feature:88458-88559:1:exon
so has part: feature:91614-92346:1:exon
so has part: feature:93291-93470:1:exon
so has part: feature:96021-96115:1:exon
so has part: feature:99223-99296:1:exon
so has part: feature:100839-100884:1:exon
so has part: feature:101117-101225:1:exon
so has part: feature:103525-103731:1:exon
so has part: feature:105310-105456:1:exon
so has part: feature:106689-106797:1:exon
so has part: feature:106973-107134:1:exon
so has part: feature:107364-107458:1:exon
so has part: feature:107707-107864:1:exon
so has part: feature:108901-109059:1:exon
so has part: feature:109463-109517:1:exon
so has part: feature:109612-109744:1:exon
so has part: feature:111473-111721:1:exon
so has part: feature:112495-112581:1:exon
so has part: feature:112813-112903:1:exon
so has part: feature:114223-114361:1:exon
so has part: feature:114849-115021:1:exon
so has part: feature:115671-115837:1:exon
so has part: feature:117331-117554:1:exon

position:117554:1
position: 117554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60286-60384:1:exon

position:60384:1
position: 60384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66971-67490:1:exon

position:66971:1
position: 66971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67490:1
position: 67490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79163-83906:1:exon

position:79163:1
position: 79163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83906:1
position: 83906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88458-88559:1:exon

position:88458:1
position: 88458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88559:1
position: 88559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:91614-92346:1:exon

position:91614:1
position: 91614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92346:1
position: 92346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:93291-93470:1:exon

position:93291:1
position: 93291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93470:1
position: 93470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:96021-96115:1:exon

position:96021:1
position: 96021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96115:1
position: 96115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:99223-99296:1:exon

position:99223:1
position: 99223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99296:1
position: 99296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:100839-100884:1:exon

position:100839:1
position: 100839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100884:1
position: 100884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:101117-101225:1:exon

position:101117:1
position: 101117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101225:1
position: 101225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:103525-103731:1:exon

position:103525:1
position: 103525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103731:1
position: 103731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:105310-105456:1:exon

position:105310:1
position: 105310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105456:1
position: 105456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:106689-106797:1:exon

position:106689:1
position: 106689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106797:1
position: 106797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:106973-107134:1:exon

position:106973:1
position: 106973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107134:1
position: 107134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:107364-107458:1:exon

position:107364:1
position: 107364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107458:1
position: 107458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:107707-107864:1:exon

position:107707:1
position: 107707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107864:1
position: 107864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:108901-109059:1:exon

position:108901:1
position: 108901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109059:1
position: 109059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:109463-109517:1:exon

position:109463:1
position: 109463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109517:1
position: 109517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:109612-109744:1:exon

position:109612:1
position: 109612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109744:1
position: 109744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:111473-111721:1:exon

position:111473:1
position: 111473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111721:1
position: 111721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:112495-112581:1:exon

position:112495:1
position: 112495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112581:1
position: 112581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:112813-112903:1:exon

position:112813:1
position: 112813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112903:1
position: 112903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:114223-114361:1:exon

position:114223:1
position: 114223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114361:1
position: 114361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:114849-115021:1:exon

position:114849:1
position: 114849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115021:1
position: 115021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:115671-115837:1:exon

position:115671:1
position: 115671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115837:1
position: 115837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:117331-117554:1:exon

position:117331:1
position: 117331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASH1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ASH1L
product: ASH1 like histone lysine methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015650095.3
SIO_010081: ASH1L
subclass of: SO_0000673
so part of: ASH1L
location: join(60287..60384,66971..67490,79163..83906,88458..88559,91614..92346,93291..93470,96021..96115,99223..99296,100839..100884,101117..101225,103525..103731,105310..105456,106689..106797,106973..107134,107364..107458,107707..107864,108901..109059,109463..109517,109612..109744,111473..111721,112495..112581,112813..112903,114223..114361,114849..115021,115671..115837,116686..116726,117331..117635,118382..120516)
location: region:60287-120516:1
so has part: feature:60287-60384:1:exon
so has part: feature:66971-67490:1:exon
so has part: feature:79163-83906:1:exon
so has part: feature:88458-88559:1:exon
so has part: feature:91614-92346:1:exon
so has part: feature:93291-93470:1:exon
so has part: feature:96021-96115:1:exon
so has part: feature:99223-99296:1:exon
so has part: feature:100839-100884:1:exon
so has part: feature:101117-101225:1:exon
so has part: feature:103525-103731:1:exon
so has part: feature:105310-105456:1:exon
so has part: feature:106689-106797:1:exon
so has part: feature:106973-107134:1:exon
so has part: feature:107364-107458:1:exon
so has part: feature:107707-107864:1:exon
so has part: feature:108901-109059:1:exon
so has part: feature:109463-109517:1:exon
so has part: feature:109612-109744:1:exon
so has part: feature:111473-111721:1:exon
so has part: feature:112495-112581:1:exon
so has part: feature:112813-112903:1:exon
so has part: feature:114223-114361:1:exon
so has part: feature:114849-115021:1:exon
so has part: feature:115671-115837:1:exon
so has part: feature:116686-116726:1:exon
so has part: feature:117331-117635:1:exon
so has part: feature:118382-120516:1:exon

position:60287:1
position: 60287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60287-60384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66971-67490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79163-83906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88458-88559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91614-92346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93291-93470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96021-96115:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99223-99296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100839-100884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101117-101225:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103525-103731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105310-105456:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106689-106797:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106973-107134:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107364-107458:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:107707-107864:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:108901-109059:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109463-109517:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:109612-109744:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:111473-111721:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:112495-112581:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:112813-112903:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:114223-114361:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:114849-115021:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:115671-115837:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:116686-116726:1:exon

position:116686:1
position: 116686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116726:1
position: 116726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:117331-117635:1:exon

position:117635:1
position: 117635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:118382-120516:1:exon

position:118382:1
position: 118382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASH1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ASH1L
product: ASH1 like histone lysine methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 26 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_015650096.3
SIO_010081: ASH1L
subclass of: SO_0000673
so part of: ASH1L
location: join(60287..60384,66971..67490,79163..83906,88458..88559,91614..92346,93291..93470,96021..96115,99223..99296,100839..100884,101117..101225,103525..103731,105310..105456,106689..106797,106973..107134,107364..107458,107707..107864,108901..109053,109463..109517,109612..109744,111473..111721,112495..112581,112813..112903,114223..114361,114849..115021,115671..115837,116686..116726,117331..117635,118382..120516)
location: region:60287-120516:1
so has part: feature:60287-60384:1:exon
so has part: feature:66971-67490:1:exon
so has part: feature:79163-83906:1:exon
so has part: feature:88458-88559:1:exon
so has part: feature:91614-92346:1:exon
so has part: feature:93291-93470:1:exon
so has part: feature:96021-96115:1:exon
so has part: feature:99223-99296:1:exon
so has part: feature:100839-100884:1:exon
so has part: feature:101117-101225:1:exon
so has part: feature:103525-103731:1:exon
so has part: feature:105310-105456:1:exon
so has part: feature:106689-106797:1:exon
so has part: feature:106973-107134:1:exon
so has part: feature:107364-107458:1:exon
so has part: feature:107707-107864:1:exon
so has part: feature:108901-109053:1:exon
so has part: feature:109463-109517:1:exon
so has part: feature:109612-109744:1:exon
so has part: feature:111473-111721:1:exon
so has part: feature:112495-112581:1:exon
so has part: feature:112813-112903:1:exon
so has part: feature:114223-114361:1:exon
so has part: feature:114849-115021:1:exon
so has part: feature:115671-115837:1:exon
so has part: feature:116686-116726:1:exon
so has part: feature:117331-117635:1:exon
so has part: feature:118382-120516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60287-60384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66971-67490:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79163-83906:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88458-88559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:91614-92346:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:93291-93470:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96021-96115:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99223-99296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:100839-100884:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:101117-101225:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:103525-103731:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:105310-105456:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106689-106797:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:106973-107134:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107364-107458:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:107707-107864:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:108901-109053:1:exon

position:109053:1
position: 109053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:109463-109517:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:109612-109744:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:111473-111721:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:112495-112581:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:112813-112903:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:114223-114361:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:114849-115021:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:115671-115837:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:116686-116726:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:117331-117635:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:118382-120516:1:exon

ASH1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ASH1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase ASH1L isoform X1
translation: MDPRNTAMLGLGSDSEGFSGKSPSVVNIGTLVGKGEAELEGCTKDEEDGKKKSREGNAESGKSEALGDAQQQFSVKETNFSEGNLKLKIGLQAKRTKKPPKNLENYVCRPAIKTSIKQPRRAPKSGKMTEEKNEHCPSKQDPSKSYKKAGEVAAVELHVEEGHQVETAPLSKKVSPLHSEMTDYIKSSPPTLISSHNSDLKDRTEINGAKTVTEKLAQLIATCPPSKSSKTKQKKPGSGNGAASGLVKDSGKKLPGAITASGLVNKDLVKKLPGSGIAVGLVNKDSGKKPLGIGSAAIMVNKDSGKKPQAISPLIGLVSKDSGKRPPGISTPTLVHKDSVKKQPVTSSAVGLISKDVGRKLPGISTPTALTNKEPLKKPVGISTPAGLVNKDAGKKLLGINSPTGLLNKDSGRKMPGTGSSTVLVNKDSGRKTPGISSPMGPVSKDPGRKMPGISSPVGLVSKDCGKKPAGIGTPAGLASKDSGSLKADSLVPSSEPFKLPCNSNLSSLESHEPADLLKENTTSKTFEKHIMRQSKESILDKFSIRKEIADVGKEMFSEGMCVPQDAYSSSEKGIYETSKHEKQPPVYCTSPDFRTGGASEVSTAKSPFSAVGEGNLPSPSPTVSVPTLSRSLSTASSQLASNSLHLSSTAELLEGISDPMGKAAFSDSSTLLSLNRTLNHSLSTDFKGAEKDLSDSKASYVETSRTSPPTGKKPILAAETSIHATVTPSVVSFTSLFGSKQFLKIGAIAASEKSCQGAKNLSSTQQSKPLKKRKGRKPRWTKVVSRSACRPPKGLELERSELFKNISYSALSSSNLEQAKFLKNIGSSSFVEHEFVKHQLPKLNETNGQSLALLSETDKQTQKFYSAHKQPSSLCMSDDFLPDIYKPKRGRPKSKEMPELEGPPKRTLKIPASKVFSVQSKEEQEPPILQPEVEIPSLKQSLSGQGFPKKRGRPKRQIRSSIKMKPPILSVAPFVGTENSNKMGPESDQHRPGEFFERKDQLRGPEEVQSPSICSMSDLEVDSDRKVAKRNNGQLMKTIIRKINKMKTLKRKKLLNQILSSTVEPNTKGKMQSKLHNTVSTLAATFGSKLGQQINVSKKGTIYIGKRRGRKPKAVLNGILASSAASLTVLEKSAQQAPGTSLGQVLPHLLPSAANPSEILPSPVCSQSSAVSGGQSPVSSDAGFIEPSSVPYLHLHSRQGSVVQTLAMKKAAKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPVSESHSDETIPSDSGIGTDNNSTSDRAEKFCGQKKKRHSFDHVSLIPPETSTVLSNLKEKHKHKCKRRSHDYLSYDKMKRQKRKRKKKYPQLRGRQDPDFLAELEELISRLSEIRITHRSHHFIPRDLLPTIFRINFNSFYTHPTFPLDPLHYIRKPDLKKKRGRPPKMREAMAEMPFMHSLSFPLSSTGFYPSYGMPYSPSPLAAAPIGLGYYGRYPPTLYPPPPSPSFTTPLPPPSYMHTGHLLLNPTKYHKKKHKLLRQEAFLTTSRTPLLSMSTYPSVPPEMAYGWMLEHKHRHRHKHREHRSSEQPQVSMDTITANSSSRTVLESLKRYRFGKEAVGERYKHKEKHRCHMSCPHLSPSKGLLSRDEQWVRREPSESNSLALGLQTPLQIDCSENSPALSLGGFTPSSEPASSDEHTNLFTSAIGSCRVTNSASTNGRKKLPESPGLFSGQDASLGRPLRKEPLPSLEKPLSGTLPSQDKPSQRQSESTNCSPSRKRSTSESTSSPGAAGAARGARLAPAAEDSVDTLLQRMAQQDGPPTLDKTLEAVMANVSAPAAASPARNHSRERALGKQDGLGAPAMAGSDGISLLQERLPGTYSPRHLKRSVVEAMQRQARKMCNYNKILATKKNLDHVNKILKAKKLQRQSRTGNNFVKRRPGRPRKYPMQAVVSMQAFQAARLVSQELQDREQSSSPLHLGPDTITDVIEAVVQSVNLNPEHRKGWKRKRWLPEEQARKRHKSLPEDEQESNKS…
SIO_010081: ASH1L
subclass of: SO_0000673
so part of: ASH1L
location: join(67071..67490,79163..83906,88458..88559,91614..92346,93291..93470,96021..96115,99223..99296,100839..100884,101117..101225,103525..103731,105310..105456,106689..106797,106973..107134,107364..107458,107707..107864,108901..109059,109463..109517,109612..109744,111473..111721,112495..112581,112813..112903,114223..114361,114849..115021,115671..115837,116686..116726,117331..117635,118382..118473)
location: region:67071-118473:1
so has part: feature:67071-67490:1:exon
so has part: feature:79163-83906:1:exon
so has part: feature:88458-88559:1:exon
so has part: feature:91614-92346:1:exon
so has part: feature:93291-93470:1:exon
so has part: feature:96021-96115:1:exon
so has part: feature:99223-99296:1:exon
so has part: feature:100839-100884:1:exon
so has part: feature:101117-101225:1:exon
so has part: feature:103525-103731:1:exon
so has part: feature:105310-105456:1:exon
so has part: feature:106689-106797:1:exon
so has part: feature:106973-107134:1:exon
so has part: feature:107364-107458:1:exon
so has part: feature:107707-107864:1:exon
so has part: feature:108901-109059:1:exon
so has part: feature:109463-109517:1:exon
so has part: feature:109612-109744:1:exon
so has part: feature:111473-111721:1:exon
so has part: feature:112495-112581:1:exon
so has part: feature:112813-112903:1:exon
so has part: feature:114223-114361:1:exon
so has part: feature:114849-115021:1:exon
so has part: feature:115671-115837:1:exon
so has part: feature:116686-116726:1:exon
so has part: feature:117331-117635:1:exon
so has part: feature:118382-118473:1:exon

XP_015505581.1
type: Protein
SIO_000068: ncbiprotein

position:67071:1
position: 67071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118473:1
position: 118473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67071-67490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79163-83906:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88458-88559:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91614-92346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93291-93470:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96021-96115:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99223-99296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100839-100884:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101117-101225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:103525-103731:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105310-105456:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106689-106797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106973-107134:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107364-107458:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107707-107864:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108901-109059:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:109463-109517:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109612-109744:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:111473-111721:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:112495-112581:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:112813-112903:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:114223-114361:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:114849-115021:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:115671-115837:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:116686-116726:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:117331-117635:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:118382-118473:1:exon

ASH1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ASH1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase ASH1L isoform X2
translation: MDPRNTAMLGLGSDSEGFSGKSPSVVNIGTLVGKGEAELEGCTKDEEDGKKKSREGNAESGKSEALGDAQQQFSVKETNFSEGNLKLKIGLQAKRTKKPPKNLENYVCRPAIKTSIKQPRRAPKSGKMTEEKNEHCPSKQDPSKSYKKAGEVAAVELHVEEGHQVETAPLSKKVSPLHSEMTDYIKSSPPTLISSHNSDLKDRTEINGAKTVTEKLAQLIATCPPSKSSKTKQKKPGSGNGAASGLVKDSGKKLPGAITASGLVNKDLVKKLPGSGIAVGLVNKDSGKKPLGIGSAAIMVNKDSGKKPQAISPLIGLVSKDSGKRPPGISTPTLVHKDSVKKQPVTSSAVGLISKDVGRKLPGISTPTALTNKEPLKKPVGISTPAGLVNKDAGKKLLGINSPTGLLNKDSGRKMPGTGSSTVLVNKDSGRKTPGISSPMGPVSKDPGRKMPGISSPVGLVSKDCGKKPAGIGTPAGLASKDSGSLKADSLVPSSEPFKLPCNSNLSSLESHEPADLLKENTTSKTFEKHIMRQSKESILDKFSIRKEIADVGKEMFSEGMCVPQDAYSSSEKGIYETSKHEKQPPVYCTSPDFRTGGASEVSTAKSPFSAVGEGNLPSPSPTVSVPTLSRSLSTASSQLASNSLHLSSTAELLEGISDPMGKAAFSDSSTLLSLNRTLNHSLSTDFKGAEKDLSDSKASYVETSRTSPPTGKKPILAAETSIHATVTPSVVSFTSLFGSKQFLKIGAIAASEKSCQGAKNLSSTQQSKPLKKRKGRKPRWTKVVSRSACRPPKGLELERSELFKNISYSALSSSNLEQAKFLKNIGSSSFVEHEFVKHQLPKLNETNGQSLALLSETDKQTQKFYSAHKQPSSLCMSDDFLPDIYKPKRGRPKSKEMPELEGPPKRTLKIPASKVFSVQSKEEQEPPILQPEVEIPSLKQSLSGQGFPKKRGRPKRQIRSSIKMKPPILSVAPFVGTENSNKMGPESDQHRPGEFFERKDQLRGPEEVQSPSICSMSDLEVDSDRKVAKRNNGQLMKTIIRKINKMKTLKRKKLLNQILSSTVEPNTKGKMQSKLHNTVSTLAATFGSKLGQQINVSKKGTIYIGKRRGRKPKAVLNGILASSAASLTVLEKSAQQAPGTSLGQVLPHLLPSAANPSEILPSPVCSQSSAVSGGQSPVSSDAGFIEPSSVPYLHLHSRQGSVVQTLAMKKAAKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPVSESHSDETIPSDSGIGTDNNSTSDRAEKFCGQKKKRHSFDHVSLIPPETSTVLSNLKEKHKHKCKRRSHDYLSYDKMKRQKRKRKKKYPQLRGRQDPDFLAELEELISRLSEIRITHRSHHFIPRDLLPTIFRINFNSFYTHPTFPLDPLHYIRKPDLKKKRGRPPKMREAMAEMPFMHSLSFPLSSTGFYPSYGMPYSPSPLAAAPIGLGYYGRYPPTLYPPPPSPSFTTPLPPPSYMHTGHLLLNPTKYHKKKHKLLRQEAFLTTSRTPLLSMSTYPSVPPEMAYGWMLEHKHRHRHKHREHRSSEQPQVSMDTITANSSSRTVLESLKRYRFGKEAVGERYKHKEKHRCHMSCPHLSPSKGLLSRDEQWVRREPSESNSLALGLQTPLQIDCSENSPALSLGGFTPSSEPASSDEHTNLFTSAIGSCRVTNSASTNGRKKLPESPGLFSGQDASLGRPLRKEPLPSLEKPLSGTLPSQDKPSQRQSESTNCSPSRKRSTSESTSSPGAAGAARGARLAPAAEDSVDTLLQRMAQQDGPPTLDKTLEAVMANVSAPAAASPARNHSRERALGKQDGLGAPAMAGSDGISLLQERLPGTYSPRHLKRSVVEAMQRQARKMCNYNKILATKKNLDHVNKILKAKKLQRQSRTGNNFVKRRPGRPRKYPMQAVVSMQAFQAARLVSQELQDREQSSSPLHLGPDTITDVIEAVVQSVNLNPEHRKGWKRKRWLPEEQARKRHKSLPEDEQESNKS…
SIO_010081: ASH1L
subclass of: SO_0000673
so part of: ASH1L
location: join(67071..67490,79163..83906,88458..88559,91614..92346,93291..93470,96021..96115,99223..99296,100839..100884,101117..101225,103525..103731,105310..105456,106689..106797,106973..107134,107364..107458,107707..107864,108901..109053,109463..109517,109612..109744,111473..111721,112495..112581,112813..112903,114223..114361,114849..115021,115671..115837,116686..116726,117331..117635,118382..118473)
location: region:67071-118473:1
so has part: feature:67071-67490:1:exon
so has part: feature:79163-83906:1:exon
so has part: feature:88458-88559:1:exon
so has part: feature:91614-92346:1:exon
so has part: feature:93291-93470:1:exon
so has part: feature:96021-96115:1:exon
so has part: feature:99223-99296:1:exon
so has part: feature:100839-100884:1:exon
so has part: feature:101117-101225:1:exon
so has part: feature:103525-103731:1:exon
so has part: feature:105310-105456:1:exon
so has part: feature:106689-106797:1:exon
so has part: feature:106973-107134:1:exon
so has part: feature:107364-107458:1:exon
so has part: feature:107707-107864:1:exon
so has part: feature:108901-109053:1:exon
so has part: feature:109463-109517:1:exon
so has part: feature:109612-109744:1:exon
so has part: feature:111473-111721:1:exon
so has part: feature:112495-112581:1:exon
so has part: feature:112813-112903:1:exon
so has part: feature:114223-114361:1:exon
so has part: feature:114849-115021:1:exon
so has part: feature:115671-115837:1:exon
so has part: feature:116686-116726:1:exon
so has part: feature:117331-117635:1:exon
so has part: feature:118382-118473:1:exon

XP_015505582.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:67071-67490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79163-83906:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88458-88559:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91614-92346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93291-93470:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96021-96115:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99223-99296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100839-100884:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101117-101225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:103525-103731:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105310-105456:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106689-106797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106973-107134:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107364-107458:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107707-107864:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108901-109053:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:109463-109517:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109612-109744:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:111473-111721:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:112495-112581:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:112813-112903:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:114223-114361:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:114849-115021:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:115671-115837:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:116686-116726:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:117331-117635:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:118382-118473:1:exon

ASH1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ASH1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase ASH1L isoform X3
translation: MDPRNTAMLGLGSDSEGFSGKSPSVVNIGTLVGKGEAELEGCTKDEEDGKKKSREGNAESGKSEALGDAQQQFSVKETNFSEGNLKLKIGLQAKRTKKPPKNLENYVCRPAIKTSIKQPRRAPKSGKMTEEKNEHCPSKQDPSKSYKKAGEVAAVELHVEEGHQVETAPLSKKVSPLHSEMTDYIKSSPPTLISSHNSDLKDRTEINGAKTVTEKLAQLIATCPPSKSSKTKQKKPGSGNGAASGLVKDSGKKLPGAITASGLVNKDLVKKLPGSGIAVGLVNKDSGKKPLGIGSAAIMVNKDSGKKPQAISPLIGLVSKDSGKRPPGISTPTLVHKDSVKKQPVTSSAVGLISKDVGRKLPGISTPTALTNKEPLKKPVGISTPAGLVNKDAGKKLLGINSPTGLLNKDSGRKMPGTGSSTVLVNKDSGRKTPGISSPMGPVSKDPGRKMPGISSPVGLVSKDCGKKPAGIGTPAGLASKDSGSLKADSLVPSSEPFKLPCNSNLSSLESHEPADLLKENTTSKTFEKHIMRQSKESILDKFSIRKEIADVGKEMFSEGMCVPQDAYSSSEKGIYETSKHEKQPPVYCTSPDFRTGGASEVSTAKSPFSAVGEGNLPSPSPTVSVPTLSRSLSTASSQLASNSLHLSSTAELLEGISDPMGKAAFSDSSTLLSLNRTLNHSLSTDFKGAEKDLSDSKASYVETSRTSPPTGKKPILAAETSIHATVTPSVVSFTSLFGSKQFLKIGAIAASEKSCQGAKNLSSTQQSKPLKKRKGRKPRWTKVVSRSACRPPKGLELERSELFKNISYSALSSSNLEQAKFLKNIGSSSFVEHEFVKHQLPKLNETNGQSLALLSETDKQTQKFYSAHKQPSSLCMSDDFLPDIYKPKRGRPKSKEMPELEGPPKRTLKIPASKVFSVQSKEEQEPPILQPEVEIPSLKQSLSGQGFPKKRGRPKRQIRSSIKMKPPILSVAPFVGTENSNKMGPESDQHRPGEFFERKDQLRGPEEVQSPSICSMSDLEVDSDRKVAKRNNGQLMKTIIRKINKMKTLKRKKLLNQILSSTVEPNTKGKMQSKLHNTVSTLAATFGSKLGQQINVSKKGTIYIGKRRGRKPKAVLNGILASSAASLTVLEKSAQQAPGTSLGQVLPHLLPSAANPSEILPSPVCSQSSAVSGGQSPVSSDAGFIEPSSVPYLHLHSRQGSVVQTLAMKKAAKGRRRLSPPTLLPNSPSHLSELTSLKEATPSPVSESHSDETIPSDSGIGTDNNSTSDRAEKFCGQKKKRHSFDHVSLIPPETSTVLSNLKEKHKHKCKRRSHDYLSYDKMKRQKRKRKKKYPQLRGRQDPDFLAELEELISRLSEIRITHRSHHFIPRDLLPTIFRINFNSFYTHPTFPLDPLHYIRKPDLKKKRGRPPKMREAMAEMPFMHSLSFPLSSTGFYPSYGMPYSPSPLAAAPIGLGYYGRYPPTLYPPPPSPSFTTPLPPPSYMHTGHLLLNPTKYHKKKHKLLRQEAFLTTSRTPLLSMSTYPSVPPEMAYGWMLEHKHRHRHKHREHRSSEQPQVSMDTITANSSSRTVLESLKRYRFGKEAVGERYKHKEKHRCHMSCPHLSPSKGLLSRDEQWVRREPSESNSLALGLQTPLQIDCSENSPALSLGGFTPSSEPASSDEHTNLFTSAIGSCRVTNSASTNGRKKLPESPGLFSGQDASLGRPLRKEPLPSLEKPLSGTLPSQDKPSQRQSESTNCSPSRKRSTSESTSSPGAAGAARGARLAPAAEDSVDTLLQRMAQQDGPPTLDKTLEAVMANVSAPAAASPARNHSRERALGKQDGLGAPAMAGSDGISLLQERLPGTYSPRHLKRSVVEAMQRQARKMCNYNKILATKKNLDHVNKILKAKKLQRQSRTGNNFVKRRPGRPRKYPMQAVVSMQAFQAARLVSQELQDREQSSSPLHLGPDTITDVIEAVVQSVNLNPEHRKGWKRKRWLPEEQARKRHKSLPEDEQESNKS…
SIO_010081: ASH1L
subclass of: SO_0000673
so part of: ASH1L
location: join(67071..67490,79163..83906,88458..88559,91614..92346,93291..93470,96021..96115,99223..99296,100839..100884,101117..101225,103525..103731,105310..105456,106689..106797,106973..107134,107364..107458,107707..107864,108901..109059,109463..109517,109612..109744,111473..111721,112495..112581,112813..112903,114223..114361,114849..115021,115671..115837,117331..117429)
location: region:67071-117429:1
so has part: feature:67071-67490:1:exon
so has part: feature:79163-83906:1:exon
so has part: feature:88458-88559:1:exon
so has part: feature:91614-92346:1:exon
so has part: feature:93291-93470:1:exon
so has part: feature:96021-96115:1:exon
so has part: feature:99223-99296:1:exon
so has part: feature:100839-100884:1:exon
so has part: feature:101117-101225:1:exon
so has part: feature:103525-103731:1:exon
so has part: feature:105310-105456:1:exon
so has part: feature:106689-106797:1:exon
so has part: feature:106973-107134:1:exon
so has part: feature:107364-107458:1:exon
so has part: feature:107707-107864:1:exon
so has part: feature:108901-109059:1:exon
so has part: feature:109463-109517:1:exon
so has part: feature:109612-109744:1:exon
so has part: feature:111473-111721:1:exon
so has part: feature:112495-112581:1:exon
so has part: feature:112813-112903:1:exon
so has part: feature:114223-114361:1:exon
so has part: feature:114849-115021:1:exon
so has part: feature:115671-115837:1:exon
so has part: feature:117331-117429:1:exon

XP_033375622.1
type: Protein
SIO_000068: ncbiprotein

position:117429:1
position: 117429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67071-67490:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79163-83906:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88458-88559:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:91614-92346:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:93291-93470:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96021-96115:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:99223-99296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:100839-100884:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:101117-101225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:103525-103731:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:105310-105456:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:106689-106797:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:106973-107134:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:107364-107458:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:107707-107864:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108901-109059:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:109463-109517:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:109612-109744:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:111473-111721:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:112495-112581:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:112813-112903:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:114223-114361:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:114849-115021:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:115671-115837:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:117331-117429:1:exon

LOC117245516
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117245516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(122336..122983)
location: region:122336-122983:-1
so has part: feature:122336-122983:-1:exon
subclass of: SO_0000011

117245516
type: Gene
SIO_000068: ncbigene

position:122336:-1
position: 122336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122983:-1
position: 122983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122336-122983:-1:exon

LOC117245516
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC117245516
product: uncharacterized LOC117245516
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004500250.1
SIO_010081: LOC117245516
subclass of: SO_0000673
so part of: LOC117245516
location: complement(join(122336..122451,122566..122983))
location: region:122336-122983:-1
so has part: feature:122566-122983:-1:exon
so has part: feature:122336-122451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:122566-122983:-1:exon

position:122566:-1
position: 122566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:122336-122451:-1:exon

position:122451:-1
position: 122451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RUSC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: RUSC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(124927..130192)
location: region:124927-130192:-1
so has part: feature:124927-130192:-1:exon
subclass of: SO_0000010

107214512
type: Gene
SIO_000068: ncbigene

position:124927:-1
position: 124927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130192:-1
position: 130192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:124927-130192:-1:exon

RUSC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RUSC1
product: RUN and SH3 domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015649998.3
SIO_010081: RUSC1
subclass of: SO_0000673
so part of: RUSC1
location: complement(join(124927..125138,125427..126444,126690..126736,126824..126929,127019..127193,127322..127398,127759..127863,128287..129905,129997..130192))
location: region:124927-130192:-1
so has part: feature:129997-130192:-1:exon
so has part: feature:128287-129905:-1:exon
so has part: feature:127759-127863:-1:exon
so has part: feature:127322-127398:-1:exon
so has part: feature:127019-127193:-1:exon
so has part: feature:126824-126929:-1:exon
so has part: feature:126690-126736:-1:exon
so has part: feature:125427-126444:-1:exon
so has part: feature:124927-125138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129997-130192:-1:exon

position:129997:-1
position: 129997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128287-129905:-1:exon

position:128287:-1
position: 128287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129905:-1
position: 129905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:127759-127863:-1:exon

position:127759:-1
position: 127759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127863:-1
position: 127863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:127322-127398:-1:exon

position:127322:-1
position: 127322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127398:-1
position: 127398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:127019-127193:-1:exon

position:127019:-1
position: 127019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127193:-1
position: 127193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:126824-126929:-1:exon

position:126824:-1
position: 126824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126929:-1
position: 126929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:126690-126736:-1:exon

position:126690:-1
position: 126690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126736:-1
position: 126736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:125427-126444:-1:exon

position:125427:-1
position: 125427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126444:-1
position: 126444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:124927-125138:-1:exon

position:125138:-1
position: 125138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RUSC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RUSC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RUN and SH3 domain-containing protein 1
translation: MLAPKKGLLCNLNHIHLQHISLGLHLSRHPELQDTDGSTARGDQTGCIHCPENREPVDANSNSPSVKCRCCESHDPEPETLGIQNQAVQEDFPCLHSGDEEEAASPCDPPCDLASSSSSSSSSSVSSCSDFSLDDSPVSVYCKGFAREESQSPDKQLNVIPTENARDGESPAAQDRTCDGRDANHNSPVLRRATAVASKSPDSLCSNNSLDSQCDELSPSTAAQHSCADLDPNCNPLPEPDAAPPAPPPVPERRDPGIPSSAPEPRPRPSGLPPPVPPRPRRRLQVLNAHRAEQQLGPVRPAEPKTGPGEPCRDTATKTITSFHELAQRRKRNVAVPTLAQARVDRSDWLIVFSPDTELPPSSELLSGPAGQEPAQPQPQPQPQQDGPARPPGSRQREVTTFKELRSRSAARQPKGQRAEPAQHPPVPPGTGAGWGPPAPLGTQVLAPSDGHQLRRRPRPSLQPIAEGQPRDVEKGGLPPGEKRLGTAPVRRLGGPGGDPAVPRAAQRGDETCTGARPEPLAPGAAAGAAAGAARPGGGRAEGAHGEQTKALLVAVSSAVDKVIAHFSTARNLVQKAQLGDSRLNPDVGYLLLHTLCPALYALVEDGLKPFQKDVITGQRKNSPWSVVEASVKTGPNTRSLHSLCWHVAGLAPLSSTRQKFHAFILGLLNIKQLELWISHLQKSPGVISVLYSPTAFFALSQGPLPHLADELLLLIQPLSVLTFHLDLLFEHHHLSVDVRPLSRRLESPLSPGRGPVPVRGAVSLGGLSGAAGDSLEDETPPDALGRVGGAGGSTRARSQATMGGLVPTPPVGAALHQTFQHVLRWGDRLSRTLLGSDTSPQSHGPEEATGGTGAGLGGWWGQLSQSSRIYTAPSKEKFPLVWWTKLRAAAGDPSPGQAVQSQTSMSEPRATELQLLQAKAVPECSGPKPSSSTDTSGTSSPEDLFLPTGTGALTKLDDPSAGKNLPAASPEPSANRNRAAPSGPEMGNPPSPDKGSWLGRLFGATSPSSRSFPPSPDAVLARSRRPSRWLSPSPRVLAGVVKGLASDRSRAPEQPDRNSPVLPQAHR
SIO_010081: RUSC1
subclass of: SO_0000673
so part of: RUSC1
location: complement(join(125006..125138,125427..126444,126690..126736,126824..126929,127019..127193,127322..127398,127759..127863,128287..129832))
location: region:125006-129832:-1
so has part: feature:128287-129832:-1:exon
so has part: feature:127759-127863:-1:exon
so has part: feature:127322-127398:-1:exon
so has part: feature:127019-127193:-1:exon
so has part: feature:126824-126929:-1:exon
so has part: feature:126690-126736:-1:exon
so has part: feature:125427-126444:-1:exon
so has part: feature:125006-125138:-1:exon

XP_015505484.1
type: Protein
SIO_000068: ncbiprotein

position:125006:-1
position: 125006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129832:-1
position: 129832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:128287-129832:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:127759-127863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127322-127398:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127019-127193:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126824-126929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:126690-126736:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:125427-126444:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:125006-125138:-1:exon

FDPS
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: FDPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(130995..133507)
location: region:130995-133507:-1
so has part: feature:130995-133507:-1:exon
subclass of: SO_0000010

107214522
type: Gene
SIO_000068: ncbigene

position:130995:-1
position: 130995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133507:-1
position: 133507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:130995-133507:-1:exon

FDPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FDPS
product: farnesyl diphosphate synthase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_033519758.1
SIO_010081: FDPS
subclass of: SO_0000673
so part of: FDPS
location: complement(join(130995..131345,131750..131884,131960..132037,132137..132209,132329..132417,132992..133114,133203..133283,133351..133507))
location: region:130995-133507:-1
so has part: feature:133351-133507:-1:exon
so has part: feature:133203-133283:-1:exon
so has part: feature:132992-133114:-1:exon
so has part: feature:132329-132417:-1:exon
so has part: feature:132137-132209:-1:exon
so has part: feature:131960-132037:-1:exon
so has part: feature:131750-131884:-1:exon
so has part: feature:130995-131345:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133351-133507:-1:exon

position:133351:-1
position: 133351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133203-133283:-1:exon

position:133203:-1
position: 133203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133283:-1
position: 133283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:132992-133114:-1:exon

position:132992:-1
position: 132992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133114:-1
position: 133114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:132329-132417:-1:exon

position:132329:-1
position: 132329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132417:-1
position: 132417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132137-132209:-1:exon

position:132137:-1
position: 132137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132209:-1
position: 132209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:131960-132037:-1:exon

position:131960:-1
position: 131960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132037:-1
position: 132037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:131750-131884:-1:exon

position:131750:-1
position: 131750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131884:-1
position: 131884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:130995-131345:-1:exon

position:131345:-1
position: 131345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FDPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FDPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: farnesyl pyrophosphate synthase
translation: MDASLTRRGQLCWYKKEGIGLDAINDAFLLESSVYQLLKRYCGQQPYYLHLLELFLQTGYQTELGQTLDLITAPISQVDLSRFSEQRYKAIVKYKTAFYSFYLPVAAAMYMAGINDKKEHENAKAIMLEMGEFFQIQDDYLDCYGDPAVTGKVGTDIQDNKCSWLVVECLRRVTPEQRQILEENYGQKEPEKVAKVKELYNALGMEAAFREYEESSYRRLQELIGKHAQHLPQDIFLDLAQKIYKRQK
SIO_010081: FDPS
subclass of: SO_0000673
so part of: FDPS
location: complement(join(131145..131345,131750..131884,131960..132037,132137..132209,132329..132417,132992..133114,133203..133250))
location: region:131145-133250:-1
so has part: feature:133203-133250:-1:exon
so has part: feature:132992-133114:-1:exon
so has part: feature:132329-132417:-1:exon
so has part: feature:132137-132209:-1:exon
so has part: feature:131960-132037:-1:exon
so has part: feature:131750-131884:-1:exon
so has part: feature:131145-131345:-1:exon

XP_033375649.1
type: Protein
SIO_000068: ncbiprotein

position:131145:-1
position: 131145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133250:-1
position: 133250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133203-133250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132992-133114:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132329-132417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132137-132209:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:131960-132037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:131750-131884:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131145-131345:-1:exon

HCN3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: HCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(136777..146526)
location: region:136777-146526:-1
so has part: feature:136777-146526:-1:exon
subclass of: SO_0000010

107214602
type: Gene
SIO_000068: ncbigene

position:136777:-1
position: 136777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146526:-1
position: 146526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136777-146526:-1:exon

HCN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: HCN3
product: hyperpolarization activated cyclic nucleotide gated potassium channel 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015650178.2
SIO_010081: HCN3
subclass of: SO_0000673
so part of: HCN3
location: complement(join(136777..140093,140613..140777,141231..141471,141571..141717,142126..142344,142785..142946,143079..143508,146316..146526))
location: region:136777-146526:-1
so has part: feature:146316-146526:-1:exon
so has part: feature:143079-143508:-1:exon
so has part: feature:142785-142946:-1:exon
so has part: feature:142126-142344:-1:exon
so has part: feature:141571-141717:-1:exon
so has part: feature:141231-141471:-1:exon
so has part: feature:140613-140777:-1:exon
so has part: feature:136777-140093:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:146316-146526:-1:exon

position:146316:-1
position: 146316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143079-143508:-1:exon

position:143079:-1
position: 143079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143508:-1
position: 143508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142785-142946:-1:exon

position:142785:-1
position: 142785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142946:-1
position: 142946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142126-142344:-1:exon

position:142126:-1
position: 142126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142344:-1
position: 142344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:141571-141717:-1:exon

position:141571:-1
position: 141571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141717:-1
position: 141717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141231-141471:-1:exon

position:141231:-1
position: 141231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141471:-1
position: 141471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:140613-140777:-1:exon

position:140613:-1
position: 140613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140777:-1
position: 140777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:136777-140093:-1:exon

position:140093:-1
position: 140093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HCN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: HCN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3
translation: MLQPAVNKFSLRMFGSHRAVEIERQRVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIILPVGITFFKDENTPPWIVFNVLSDTFFLADLVLNFRTGIVVEDNTEIILDPHTIKMKYLKSWFLVDFVSSIPVDYIFLIVDLETQVDSDVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPEDCWVSKNHMVNDSWGKQYSHALFKAMSHMLCIGYGQQAPEGMTDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPGDTRQRIHEYYEHRYQGKMFDEENILGELSEPLKEEIINFNCRNLVANMPLFANADPNFVTAMLTKLRFEVFQPGDFIIREGTVGKKMYFIQHGVVSILTKGNKETKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVAMDRLDRIGKKNSILLRKRAEHSSGPLNNEMIQQIVKHDQDMAHNIQDLQQMAMGRELSGKPVIWEPLVHAPLQTAAATTNVAIALTHQHSLQAHIFLPPSSISSPLSPEATLLTKPVRRSQPSLGGSRPSSVSSPSGVQSHLQTPAAGSPSSPMVQSQAPLESGGQRPSPGAQPPPRAAQRGEMAAGAKQPPAPGPQPQLSRSRGASVSTSLLQQAASAASPSSEQALPPGRTLHYSLSRATGSHISLLMHPQQLVKHRSIQGLPVGRLTQDVRLLSASQPSLPNKVAQQADGSSLKQGRKSAGNLARRSSPSVAGLLAKPCAGVPGQPTHPQQMPSGSLAQPGRSSAGAPAPQSPGSASRQAAGPSRKGSVAFSPEVETAKPKLPSNM
SIO_010081: HCN3
subclass of: SO_0000673
so part of: HCN3
location: complement(join(138946..140093,140613..140777,141231..141471,141571..141717,142126..142344,142785..142946,143079..143508,146316..146440))
location: region:138946-146440:-1
so has part: feature:146316-146440:-1:exon
so has part: feature:143079-143508:-1:exon
so has part: feature:142785-142946:-1:exon
so has part: feature:142126-142344:-1:exon
so has part: feature:141571-141717:-1:exon
so has part: feature:141231-141471:-1:exon
so has part: feature:140613-140777:-1:exon
so has part: feature:138946-140093:-1:exon

XP_015505664.1
type: Protein
SIO_000068: ncbiprotein

position:138946:-1
position: 138946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:146440:-1
position: 146440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146316-146440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143079-143508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142785-142946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142126-142344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:141571-141717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:141231-141471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140613-140777:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:138946-140093:-1:exon

CLK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 147591..157963
location: region:147591-157963:1
so has part: feature:147591-157963:1:exon
subclass of: SO_0000010

107214573
type: Gene
SIO_000068: ncbigene

position:147591:1
position: 147591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157963:1
position: 157963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147591-157963:1:exon

CLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CLK2
product: CDC like kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_015650105.1
SIO_010081: CLK2
subclass of: SO_0000673
so part of: CLK2
location: join(147591..147750,149810..149979,151449..151683,153375..153468,153815..153881,154187..154303,154523..154689,155099..155193,155485..155614,156298..156380,156605..156684,156875..156965,157318..157963)
location: region:147591-157963:1
so has part: feature:147591-147750:1:exon
so has part: feature:149810-149979:1:exon
so has part: feature:151449-151683:1:exon
so has part: feature:153375-153468:1:exon
so has part: feature:153815-153881:1:exon
so has part: feature:154187-154303:1:exon
so has part: feature:154523-154689:1:exon
so has part: feature:155099-155193:1:exon
so has part: feature:155485-155614:1:exon
so has part: feature:156298-156380:1:exon
so has part: feature:156605-156684:1:exon
so has part: feature:156875-156965:1:exon
so has part: feature:157318-157963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147591-147750:1:exon

position:147750:1
position: 147750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:149810-149979:1:exon

position:149810:1
position: 149810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149979:1
position: 149979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:151449-151683:1:exon

position:151449:1
position: 151449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151683:1
position: 151683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:153375-153468:1:exon

position:153375:1
position: 153375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153468:1
position: 153468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:153815-153881:1:exon

position:153815:1
position: 153815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153881:1
position: 153881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:154187-154303:1:exon

position:154187:1
position: 154187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154303:1
position: 154303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:154523-154689:1:exon

position:154523:1
position: 154523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154689:1
position: 154689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:155099-155193:1:exon

position:155099:1
position: 155099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155193:1
position: 155193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:155485-155614:1:exon

position:155485:1
position: 155485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155614:1
position: 155614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:156298-156380:1:exon

position:156298:1
position: 156298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156380:1
position: 156380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:156605-156684:1:exon

position:156605:1
position: 156605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156684:1
position: 156684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:156875-156965:1:exon

position:156875:1
position: 156875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156965:1
position: 156965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:157318-157963:1:exon

position:157318:1
position: 157318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CLK2
product: CDC like kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_015650103.3
SIO_010081: CLK2
subclass of: SO_0000673
so part of: CLK2
location: join(147622..147750,149810..149979,151449..151683,153372..153468,153815..153881,154187..154303,154523..154689,155099..155193,155485..155614,156298..156380,156605..156684,156875..156965,157318..157963)
location: region:147622-157963:1
so has part: feature:147622-147750:1:exon
so has part: feature:149810-149979:1:exon
so has part: feature:151449-151683:1:exon
so has part: feature:153372-153468:1:exon
so has part: feature:153815-153881:1:exon
so has part: feature:154187-154303:1:exon
so has part: feature:154523-154689:1:exon
so has part: feature:155099-155193:1:exon
so has part: feature:155485-155614:1:exon
so has part: feature:156298-156380:1:exon
so has part: feature:156605-156684:1:exon
so has part: feature:156875-156965:1:exon
so has part: feature:157318-157963:1:exon

position:147622:1
position: 147622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147622-147750:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:149810-149979:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:151449-151683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153372-153468:1:exon

position:153372:1
position: 153372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:153815-153881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154187-154303:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154523-154689:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155099-155193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155485-155614:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156298-156380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:156605-156684:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:156875-156965:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:157318-157963:1:exon

CLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein kinase CLK2 isoform X1
translation: MPHSRRYRSSERSSRGSYHERYRSRKHKRRRTRSRSSSSERDRRHRREDSYHVRSRSYDDHSADRRAYDRRYCDSYRRNDYSRERGDAYYEPEYRHSYEYRRSRDREGSYRSCKSSRRKHRRRRRRSRSFSRSSSQRSRQSSRRAKSVEDDDEGHLIYRVGDWLQERYEIISTLGEGTFGRVVQCMDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPENTNLCVRMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQVCQAVKFLHDNKLTHTDLKPENILFVNSDYELSYNLEKKRDERSVKSTAIRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMVRKTRKQKYFYHGRLDWDENTSAGRYVRENCKPLRRYLTSEAEDHHRLFDLIESMLEYEPSKRVTLAEALKHPFFDMLGMEPSTKMWDSSRDISR
SIO_010081: CLK2
subclass of: SO_0000673
so part of: CLK2
location: join(149810..149979,151449..151683,153372..153468,153815..153881,154187..154303,154523..154689,155099..155193,155485..155614,156298..156380,156605..156684,156875..156965,157318..157500)
location: region:149810-157500:1
so has part: feature:149810-149979:1:exon
so has part: feature:151449-151683:1:exon
so has part: feature:153372-153468:1:exon
so has part: feature:153815-153881:1:exon
so has part: feature:154187-154303:1:exon
so has part: feature:154523-154689:1:exon
so has part: feature:155099-155193:1:exon
so has part: feature:155485-155614:1:exon
so has part: feature:156298-156380:1:exon
so has part: feature:156605-156684:1:exon
so has part: feature:156875-156965:1:exon
so has part: feature:157318-157500:1:exon

XP_015505589.1
type: Protein
SIO_000068: ncbiprotein

position:157500:1
position: 157500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149810-149979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151449-151683:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153372-153468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153815-153881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154187-154303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154523-154689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155099-155193:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155485-155614:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156298-156380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156605-156684:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:156875-156965:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157318-157500:1:exon

CLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein kinase CLK2 isoform X2
translation: MPHSRRYRSSERSSRGSYHERYRSRKHKRRRTRSRSSSSERDRRHRREDSYHVRSRSYDDHSADRRAYDRRYCDSYRRNDYSRERGDAYYEPEYRHSYEYRRSRDREGSYRSCKSSRRKHRRRRRRSRSFSRSSSRSRQSSRRAKSVEDDDEGHLIYRVGDWLQERYEIISTLGEGTFGRVVQCMDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPENTNLCVRMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQVCQAVKFLHDNKLTHTDLKPENILFVNSDYELSYNLEKKRDERSVKSTAIRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMVRKTRKQKYFYHGRLDWDENTSAGRYVRENCKPLRRYLTSEAEDHHRLFDLIESMLEYEPSKRVTLAEALKHPFFDMLGMEPSTKMWDSSRDISR
SIO_010081: CLK2
subclass of: SO_0000673
so part of: CLK2
location: join(149810..149979,151449..151683,153375..153468,153815..153881,154187..154303,154523..154689,155099..155193,155485..155614,156298..156380,156605..156684,156875..156965,157318..157500)
location: region:149810-157500:1
so has part: feature:149810-149979:1:exon
so has part: feature:151449-151683:1:exon
so has part: feature:153375-153468:1:exon
so has part: feature:153815-153881:1:exon
so has part: feature:154187-154303:1:exon
so has part: feature:154523-154689:1:exon
so has part: feature:155099-155193:1:exon
so has part: feature:155485-155614:1:exon
so has part: feature:156298-156380:1:exon
so has part: feature:156605-156684:1:exon
so has part: feature:156875-156965:1:exon
so has part: feature:157318-157500:1:exon

XP_015505591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:149810-149979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151449-151683:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:153375-153468:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153815-153881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154187-154303:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154523-154689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155099-155193:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155485-155614:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156298-156380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156605-156684:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:156875-156965:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:157318-157500:1:exon

CLK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CLK2
product: CDC like kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033519734.1
SIO_010081: CLK2
subclass of: SO_0000673
so part of: CLK2
location: join(151516..151683,154187..154303,154523..154689,155099..155193,155485..155614,156298..156380,156605..156684,156875..156965,157318..157963)
location: region:151516-157963:1
so has part: feature:151516-151683:1:exon
so has part: feature:154187-154303:1:exon
so has part: feature:154523-154689:1:exon
so has part: feature:155099-155193:1:exon
so has part: feature:155485-155614:1:exon
so has part: feature:156298-156380:1:exon
so has part: feature:156605-156684:1:exon
so has part: feature:156875-156965:1:exon
so has part: feature:157318-157963:1:exon

position:151516:1
position: 151516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151516-151683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154187-154303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154523-154689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155099-155193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:155485-155614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156298-156380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156605-156684:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156875-156965:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:157318-157963:1:exon

CLK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CLK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein kinase CLK2 isoform X3
translation: MPTTSPSTDIPTSTGAPGTARAATGAAKAAGVSTGGGGAAAGPLAAPHRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPENTNLCVRMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQVCQAVKFLHDNKLTHTDLKPENILFVNSDYELSYNLEKKRDERSVKSTAIRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMMERILGPIPSRMVRKTRKQKYFYHGRLDWDENTSAGRYVRENCKPLRRYLTSEAEDHHRLFDLIESMLEYEPSKRVTLAEALKHPFFDMLGMEPSTKMWDSSRDISR
SIO_010081: CLK2
subclass of: SO_0000673
so part of: CLK2
location: join(151538..151683,154187..154303,154523..154689,155099..155193,155485..155614,156298..156380,156605..156684,156875..156965,157318..157500)
location: region:151538-157500:1
so has part: feature:151538-151683:1:exon
so has part: feature:154187-154303:1:exon
so has part: feature:154523-154689:1:exon
so has part: feature:155099-155193:1:exon
so has part: feature:155485-155614:1:exon
so has part: feature:156298-156380:1:exon
so has part: feature:156605-156684:1:exon
so has part: feature:156875-156965:1:exon
so has part: feature:157318-157500:1:exon

XP_033375625.1
type: Protein
SIO_000068: ncbiprotein

position:151538:1
position: 151538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151538-151683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154187-154303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:154523-154689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155099-155193:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:155485-155614:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156298-156380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:156605-156684:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:156875-156965:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:157318-157500:1:exon

LOC117245514
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117245514
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(155606..159290)
location: region:155606-159290:-1
so has part: feature:155606-159290:-1:exon
subclass of: SO_0000011

117245514
type: Gene
SIO_000068: ncbigene

position:155606:-1
position: 155606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159290:-1
position: 159290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:155606-159290:-1:exon

LOC117245514
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC117245514
product: uncharacterized LOC117245514
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004500246.1
SIO_010081: LOC117245514
subclass of: SO_0000673
so part of: LOC117245514
location: complement(join(155606..156193,158656..158780,158886..159290))
location: region:155606-159290:-1
so has part: feature:158886-159290:-1:exon
so has part: feature:158656-158780:-1:exon
so has part: feature:155606-156193:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:158886-159290:-1:exon

position:158886:-1
position: 158886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:158656-158780:-1:exon

position:158656:-1
position: 158656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158780:-1
position: 158780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155606-156193:-1:exon

position:156193:-1
position: 156193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCAMP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SCAMP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 159590..162585
location: region:159590-162585:1
so has part: feature:159590-162585:1:exon
subclass of: SO_0000010

107214574
type: Gene
SIO_000068: ncbigene

position:159590:1
position: 159590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162585:1
position: 162585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159590-162585:1:exon

SCAMP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SCAMP3
product: secretory carrier membrane protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015650107.2
SIO_010081: SCAMP3
subclass of: SO_0000673
so part of: SCAMP3
location: join(159590..159758,159876..159995,160083..160203,160279..160407,160555..160714,160874..160975,161057..161174,161288..162585)
location: region:159590-162585:1
so has part: feature:159590-159758:1:exon
so has part: feature:159876-159995:1:exon
so has part: feature:160083-160203:1:exon
so has part: feature:160279-160407:1:exon
so has part: feature:160555-160714:1:exon
so has part: feature:160874-160975:1:exon
so has part: feature:161057-161174:1:exon
so has part: feature:161288-162585:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159590-159758:1:exon

position:159758:1
position: 159758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159876-159995:1:exon

position:159876:1
position: 159876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159995:1
position: 159995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160083-160203:1:exon

position:160083:1
position: 160083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160203:1
position: 160203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:160279-160407:1:exon

position:160279:1
position: 160279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160407:1
position: 160407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160555-160714:1:exon

position:160555:1
position: 160555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160714:1
position: 160714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:160874-160975:1:exon

position:160874:1
position: 160874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160975:1
position: 160975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:161057-161174:1:exon

position:161057:1
position: 161057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161174:1
position: 161174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:161288-162585:1:exon

position:161288:1
position: 161288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SCAMP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SCAMP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secretory carrier-associated membrane protein 3
translation: MAQRGGPAVLPDNPFQDPTALQARSGAVLDGYNPFESDAPPPPFQTPSVAPPPPVPAAAQPPRKASPTEPRNYGSYGSQASAAAATAELLKRQEELNRKAEELDRRERELQNAALGGSQTRLNNWPPLPSFCPVKPCFYQDIPVEIPADFQKTVTTMYYLWMASTIALFLNFLSSLAWFCVDPSSGSGFGLSILWALLYTPCSFVCWYRPMYKAFRSDSSFNFFVFFFVFFAQNVMYVLQAIGIPNWGFSGWILSLIALRTNKAVAVMMILVSLSFTGVAVLGIIMLKKIHSLYRRTGASFQKAQEEFAAGVFSNQAVRTAAANAAAGAATNAFRAP
SIO_010081: SCAMP3
subclass of: SO_0000673
so part of: SCAMP3
location: join(159642..159758,159876..159995,160083..160203,160279..160407,160555..160714,160874..160975,161057..161174,161288..161434)
location: region:159642-161434:1
so has part: feature:159642-159758:1:exon
so has part: feature:159876-159995:1:exon
so has part: feature:160083-160203:1:exon
so has part: feature:160279-160407:1:exon
so has part: feature:160555-160714:1:exon
so has part: feature:160874-160975:1:exon
so has part: feature:161057-161174:1:exon
so has part: feature:161288-161434:1:exon

XP_015505593.1
type: Protein
SIO_000068: ncbiprotein

position:159642:1
position: 159642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161434:1
position: 161434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159642-159758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159876-159995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160083-160203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:160279-160407:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160555-160714:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:160874-160975:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161057-161174:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:161288-161434:1:exon

FAM189B
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: FAM189B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 162736..169273
location: region:162736-169273:1
so has part: feature:162736-169273:1:exon
subclass of: SO_0000010

107214569
type: Gene
SIO_000068: ncbigene

position:162736:1
position: 162736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169273:1
position: 169273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:162736-169273:1:exon

FAM189B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FAM189B
product: family with sequence similarity 189 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015650097.3
SIO_010081: FAM189B
subclass of: SO_0000673
so part of: FAM189B
location: join(162736..163647,164215..164271,164426..164536,164719..164844,164939..165046,165227..165387,165486..165585,165655..165745,165829..166401,166629..166697,167396..167643,168220..169273)
location: region:162736-169273:1
so has part: feature:162736-163647:1:exon
so has part: feature:164215-164271:1:exon
so has part: feature:164426-164536:1:exon
so has part: feature:164719-164844:1:exon
so has part: feature:164939-165046:1:exon
so has part: feature:165227-165387:1:exon
so has part: feature:165486-165585:1:exon
so has part: feature:165655-165745:1:exon
so has part: feature:165829-166401:1:exon
so has part: feature:166629-166697:1:exon
so has part: feature:167396-167643:1:exon
so has part: feature:168220-169273:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:162736-163647:1:exon

position:163647:1
position: 163647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:164215-164271:1:exon

position:164215:1
position: 164215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164271:1
position: 164271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:164426-164536:1:exon

position:164426:1
position: 164426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164536:1
position: 164536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:164719-164844:1:exon

position:164719:1
position: 164719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164844:1
position: 164844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:164939-165046:1:exon

position:164939:1
position: 164939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165046:1
position: 165046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:165227-165387:1:exon

position:165227:1
position: 165227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165387:1
position: 165387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:165486-165585:1:exon

position:165486:1
position: 165486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165585:1
position: 165585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:165655-165745:1:exon

position:165655:1
position: 165655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165745:1
position: 165745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:165829-166401:1:exon

position:165829:1
position: 165829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166401:1
position: 166401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:166629-166697:1:exon

position:166629:1
position: 166629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166697:1
position: 166697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:167396-167643:1:exon

position:167396:1
position: 167396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167643:1
position: 167643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:168220-169273:1:exon

position:168220:1
position: 168220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM189B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FAM189B
product: family with sequence similarity 189 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015650098.3
SIO_010081: FAM189B
subclass of: SO_0000673
so part of: FAM189B
location: join(163429..163647,164215..164271,164426..164536,164719..164844,164939..165046,165227..165387,165486..165585,165655..165745,165829..166401,166632..166697,167396..167643,168220..169273)
location: region:163429-169273:1
so has part: feature:163429-163647:1:exon
so has part: feature:164215-164271:1:exon
so has part: feature:164426-164536:1:exon
so has part: feature:164719-164844:1:exon
so has part: feature:164939-165046:1:exon
so has part: feature:165227-165387:1:exon
so has part: feature:165486-165585:1:exon
so has part: feature:165655-165745:1:exon
so has part: feature:165829-166401:1:exon
so has part: feature:166632-166697:1:exon
so has part: feature:167396-167643:1:exon
so has part: feature:168220-169273:1:exon

position:163429:1
position: 163429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163429-163647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164215-164271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164426-164536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164719-164844:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:164939-165046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165227-165387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165486-165585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165655-165745:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165829-166401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:166632-166697:1:exon

position:166632:1
position: 166632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:167396-167643:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:168220-169273:1:exon

FAM189B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FAM189B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189B isoform X1
translation: MPSPTDSSRSLTGRSSRSLTHLRLQRTWLQALLVLGLVQAILGVLIVTFSLVAATITPSTKIRQSCPSWAGFSLALSGLVGIISWKRPLTLVIAFFTLLSVLGVMLSLAGSILSCQNAQLVKTLEACERERDTCVCCQARSEPPPASCSQQSEMLTMFPNPNCRSIRVALKDLLFSVCGLTIFSTIICTLSAVVCCIQIFSLDIVHVLVPQRSSSVTLECTSPPDTFLQSMMDFEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDFPPSYETVMGLRGDSQATLFDSQLTEGSHACTCDCDRVPSIVLSGEVSMDSGSLIMSEIMDIPGDSSPSEDSCLLELQGSMRSVDFVLFRSIQRSRADYCLSVDCVRCSHHARSPTLALQGPFEETPQPRVRGERSYSCSTAEPGHDGILVRGAVTHSCNRLAGPGRCAGPCFPEVRLKDKGSSLQGRGGGRPPDTGPGRPRRNSETSCPSSPAPGLAPRPLLRSHSDPGVPMAGRAADFREVLYTKALEDTVSDSSADTGLCSEACLLHRSHCDSPPLLRAGSVGKNKLPPCKKVPQQLSKTTTRSLGDLKGYRGTRGLVARFLQRPKRSLAAGMEVSGHKQVPWSAWLGAERPHEGIHLQSCGDLSSTSSLRRLLSTRRLERSRPRSLSGACKESAL
SIO_010081: FAM189B
subclass of: SO_0000673
so part of: FAM189B
location: join(163429..163647,164215..164271,164426..164536,164719..164844,164939..165046,165227..165387,165486..165585,165655..165745,165829..166401,166629..166697,167396..167643,168220..168390)
location: region:163429-168390:1
so has part: feature:163429-163647:1:exon
so has part: feature:164215-164271:1:exon
so has part: feature:164426-164536:1:exon
so has part: feature:164719-164844:1:exon
so has part: feature:164939-165046:1:exon
so has part: feature:165227-165387:1:exon
so has part: feature:165486-165585:1:exon
so has part: feature:165655-165745:1:exon
so has part: feature:165829-166401:1:exon
so has part: feature:166629-166697:1:exon
so has part: feature:167396-167643:1:exon
so has part: feature:168220-168390:1:exon

XP_015505583.1
type: Protein
SIO_000068: ncbiprotein

position:168390:1
position: 168390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:163429-163647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164215-164271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164426-164536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164719-164844:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:164939-165046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165227-165387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165486-165585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165655-165745:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165829-166401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:166629-166697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:167396-167643:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:168220-168390:1:exon

FAM189B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FAM189B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM189B isoform X2
translation: MPSPTDSSRSLTGRSSRSLTHLRLQRTWLQALLVLGLVQAILGVLIVTFSLVAATITPSTKIRQSCPSWAGFSLALSGLVGIISWKRPLTLVIAFFTLLSVLGVMLSLAGSILSCQNAQLVKTLEACERERDTCVCCQARSEPPPASCSQQSEMLTMFPNPNCRSIRVALKDLLFSVCGLTIFSTIICTLSAVVCCIQIFSLDIVHVLVPQRSSSVTLECTSPPDTFLQSMMDFEEFVPPVPPPPYYPPEYTCSSETDAQSITYNGSMDSPVPLYPTDFPPSYETVMGLRGDSQATLFDSQLTEGSHACTCDCDRVPSIVLSGEVSMDSGSLIMSEIMDIPGDSSPSEDSCLLELQGSMRSVDFVLFRSIQRSRADYCLSVDCVRCSHHARSPTLALQGPFEETPQPRVRGERSYSCSTAEPGHDGILVRGAVTHSCNRLAGPGRCAGPCFPEVRLKDKGSSLQGRGGGRPPDTGPGRPRRNSETSCPSSPAPGLAPRPLLRSHSDPGVPMAGRADFREVLYTKALEDTVSDSSADTGLCSEACLLHRSHCDSPPLLRAGSVGKNKLPPCKKVPQQLSKTTTRSLGDLKGYRGTRGLVARFLQRPKRSLAAGMEVSGHKQVPWSAWLGAERPHEGIHLQSCGDLSSTSSLRRLLSTRRLERSRPRSLSGACKESAL
SIO_010081: FAM189B
subclass of: SO_0000673
so part of: FAM189B
location: join(163429..163647,164215..164271,164426..164536,164719..164844,164939..165046,165227..165387,165486..165585,165655..165745,165829..166401,166632..166697,167396..167643,168220..168390)
location: region:163429-168390:1
so has part: feature:163429-163647:1:exon
so has part: feature:164215-164271:1:exon
so has part: feature:164426-164536:1:exon
so has part: feature:164719-164844:1:exon
so has part: feature:164939-165046:1:exon
so has part: feature:165227-165387:1:exon
so has part: feature:165486-165585:1:exon
so has part: feature:165655-165745:1:exon
so has part: feature:165829-166401:1:exon
so has part: feature:166632-166697:1:exon
so has part: feature:167396-167643:1:exon
so has part: feature:168220-168390:1:exon

XP_015505584.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:163429-163647:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:164215-164271:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164426-164536:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164719-164844:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:164939-165046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165227-165387:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165486-165585:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165655-165745:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165829-166401:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:166632-166697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:167396-167643:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:168220-168390:1:exon

GBA
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: GBA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 169329..172486
location: region:169329-172486:1
so has part: feature:169329-172486:1:exon
subclass of: SO_0000010

107214572
type: Gene
SIO_000068: ncbigene

position:169329:1
position: 169329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172486:1
position: 172486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169329-172486:1:exon

GBA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GBA
product: glucosylceramidase beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_015650102.1
SIO_010081: GBA
subclass of: SO_0000673
so part of: GBA
location: join(169329..169718,169999..170190,170265..170411,170509..170642,170722..170894,170980..171217,171321..171545,171627..171790,171918..172043,172137..172486)
location: region:169329-172486:1
so has part: feature:169329-169718:1:exon
so has part: feature:169999-170190:1:exon
so has part: feature:170265-170411:1:exon
so has part: feature:170509-170642:1:exon
so has part: feature:170722-170894:1:exon
so has part: feature:170980-171217:1:exon
so has part: feature:171321-171545:1:exon
so has part: feature:171627-171790:1:exon
so has part: feature:171918-172043:1:exon
so has part: feature:172137-172486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169329-169718:1:exon

position:169718:1
position: 169718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:169999-170190:1:exon

position:169999:1
position: 169999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170190:1
position: 170190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:170265-170411:1:exon

position:170265:1
position: 170265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170411:1
position: 170411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:170509-170642:1:exon

position:170509:1
position: 170509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170642:1
position: 170642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170722-170894:1:exon

position:170722:1
position: 170722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170894:1
position: 170894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:170980-171217:1:exon

position:170980:1
position: 170980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171217:1
position: 171217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:171321-171545:1:exon

position:171321:1
position: 171321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171545:1
position: 171545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:171627-171790:1:exon

position:171627:1
position: 171627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171790:1
position: 171790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:171918-172043:1:exon

position:171918:1
position: 171918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172043:1
position: 172043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:172137-172486:1:exon

position:172137:1
position: 172137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GBA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GBA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal acid glucosylceramidase isoform X2
translation: MGAALCWRLLLVLLAGHRAAGSRPCSPKYFGRDAMVCVCNATYCDTLDPLALPDPGSYVKYESSKAGKRLERSEGRFQRRLCAPDVVLTLDTTQRFQRVKGFGGSITDAAAINILSLPERAQDHLLRSYFSEEGLEYNLIRLPMASCDFSLHAYTYDDVPYDYELTHFSLRDEDTKLKIPLLHRASAMSKRPLSLYASPWTSPTWLKTSESYVGKGTLKGQAGDRYHKTWANYFVRFLDEYAKHNVTFWAVTAENEPTAGLINNYPFQCLGFTAEQQRDFIARDLGPALANSSHRHVQLIILDDNRLHLPHWARVVLEDEGAARYVHGIGIHWYLDFIGPIQDTVLPTHELFPDYFILATEACIGAHFWERDVILGCWERGNQYSHSILMNLNHFVAGWTDWNLALDLEGGPNWVKNYVDSPIIVDSSEGIFYKQPMFYHMGHFSKFIPEGSQRVGLVASRESKKTALEYAAFLRPDGAVVVVLLNRSPQDIALGLADTVGLIAAVAPANSIQTYLWRRQ
SIO_010081: GBA
subclass of: SO_0000673
so part of: GBA
location: join(169658..169718,169999..170190,170265..170411,170509..170642,170722..170894,170980..171217,171321..171545,171627..171790,171918..172043,172137..172239)
location: region:169658-172239:1
so has part: feature:169658-169718:1:exon
so has part: feature:169999-170190:1:exon
so has part: feature:170265-170411:1:exon
so has part: feature:170509-170642:1:exon
so has part: feature:170722-170894:1:exon
so has part: feature:170980-171217:1:exon
so has part: feature:171321-171545:1:exon
so has part: feature:171627-171790:1:exon
so has part: feature:171918-172043:1:exon
so has part: feature:172137-172239:1:exon

XP_015505588.1
type: Protein
SIO_000068: ncbiprotein

position:169658:1
position: 169658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172239:1
position: 172239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169658-169718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169999-170190:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170265-170411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170509-170642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170722-170894:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:170980-171217:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171321-171545:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171627-171790:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:171918-172043:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:172137-172239:1:exon

GBA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GBA
product: glucosylceramidase beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_015650101.3
SIO_010081: GBA
subclass of: SO_0000673
so part of: GBA
location: join(169748..170190,170265..170411,170509..170642,170722..170894,170980..171217,171321..171545,171627..171790,171918..172043,172137..172486)
location: region:169748-172486:1
so has part: feature:169748-170190:1:exon
so has part: feature:170265-170411:1:exon
so has part: feature:170509-170642:1:exon
so has part: feature:170722-170894:1:exon
so has part: feature:170980-171217:1:exon
so has part: feature:171321-171545:1:exon
so has part: feature:171627-171790:1:exon
so has part: feature:171918-172043:1:exon
so has part: feature:172137-172486:1:exon

position:169748:1
position: 169748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169748-170190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170265-170411:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170509-170642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170722-170894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170980-171217:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171321-171545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171627-171790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171918-172043:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:172137-172486:1:exon

GBA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GBA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal acid glucosylceramidase isoform X1
translation: MDRNGRGGNPLGVRGRDSRELPAGPGQRGARCSGGAGVWSTGQWHHPRGRRESWRGHLPEAAPSALPCPPGSRPCSPKYFGRDAMVCVCNATYCDTLDPLALPDPGSYVKYESSKAGKRLERSEGRFQRRLCAPDVVLTLDTTQRFQRVKGFGGSITDAAAINILSLPERAQDHLLRSYFSEEGLEYNLIRLPMASCDFSLHAYTYDDVPYDYELTHFSLRDEDTKLKIPLLHRASAMSKRPLSLYASPWTSPTWLKTSESYVGKGTLKGQAGDRYHKTWANYFVRFLDEYAKHNVTFWAVTAENEPTAGLINNYPFQCLGFTAEQQRDFIARDLGPALANSSHRHVQLIILDDNRLHLPHWARVVLEDEGAARYVHGIGIHWYLDFIGPIQDTVLPTHELFPDYFILATEACIGAHFWERDVILGCWERGNQYSHSILMNLNHFVAGWTDWNLALDLEGGPNWVKNYVDSPIIVDSSEGIFYKQPMFYHMGHFSKFIPEGSQRVGLVASRESKKTALEYAAFLRPDGAVVVVLLNRSPQDIALGLADTVGLIAAVAPANSIQTYLWRRQ
SIO_010081: GBA
subclass of: SO_0000673
so part of: GBA
location: join(169788..170190,170265..170411,170509..170642,170722..170894,170980..171217,171321..171545,171627..171790,171918..172043,172137..172239)
location: region:169788-172239:1
so has part: feature:169788-170190:1:exon
so has part: feature:170265-170411:1:exon
so has part: feature:170509-170642:1:exon
so has part: feature:170722-170894:1:exon
so has part: feature:170980-171217:1:exon
so has part: feature:171321-171545:1:exon
so has part: feature:171627-171790:1:exon
so has part: feature:171918-172043:1:exon
so has part: feature:172137-172239:1:exon

XP_015505587.1
type: Protein
SIO_000068: ncbiprotein

position:169788:1
position: 169788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169788-170190:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:170265-170411:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:170509-170642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170722-170894:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170980-171217:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171321-171545:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:171627-171790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:171918-172043:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:172137-172239:1:exon

LOC107214570
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 172579..181437
location: region:172579-181437:1
so has part: feature:172579-181437:1:exon
subclass of: SO_0000010

107214570
type: Gene
SIO_000068: ncbigene

position:172579:1
position: 172579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181437:1
position: 181437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172579-181437:1:exon

LOC107214570
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214570
product: lysosomal acid glucosylceramidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015650100.3
SIO_010081: LOC107214570
subclass of: SO_0000673
so part of: LOC107214570
location: join(172579..176074,176272..176463,176539..176685,176814..176947,177283..177455,177557..177791,178512..178736,178805..178968,179046..179171,179247..181437)
location: region:172579-181437:1
so has part: feature:172579-176074:1:exon
so has part: feature:176272-176463:1:exon
so has part: feature:176539-176685:1:exon
so has part: feature:176814-176947:1:exon
so has part: feature:177283-177455:1:exon
so has part: feature:177557-177791:1:exon
so has part: feature:178512-178736:1:exon
so has part: feature:178805-178968:1:exon
so has part: feature:179046-179171:1:exon
so has part: feature:179247-181437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172579-176074:1:exon

position:176074:1
position: 176074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176272-176463:1:exon

position:176272:1
position: 176272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176463:1
position: 176463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:176539-176685:1:exon

position:176539:1
position: 176539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176685:1
position: 176685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176814-176947:1:exon

position:176814:1
position: 176814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176947:1
position: 176947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:177283-177455:1:exon

position:177283:1
position: 177283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177455:1
position: 177455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:177557-177791:1:exon

position:177557:1
position: 177557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177791:1
position: 177791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:178512-178736:1:exon

position:178512:1
position: 178512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178736:1
position: 178736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:178805-178968:1:exon

position:178805:1
position: 178805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178968:1
position: 178968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:179046-179171:1:exon

position:179046:1
position: 179046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179171:1
position: 179171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:179247-181437:1:exon

position:179247:1
position: 179247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214570
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal acid glucosylceramidase-like
translation: MWAVGVLGWLLLLLLLPVSRVAGARPCIPKDFGHGSLVCVCNATYCDTLDPLVLPTPGSYVKYESSKAGKRLERSEGRFQSSLRTPGLLLTLNISTLYQHVKGFGGSLSDAAAMNILKLSQPAQDNLLRSYFSESGIEYNLIRVPMACSDFSVRPYSYDDVPDDYELKHFRLADEDVKMKIPLLNRALAMSKRPLLLFASPWTAPAWMRSNGDVRGKGTLKGKAGDKYHKTWANYFIKFLDEYAKHNVTFWAVTAQNEPLAGLFTPPQAPTIAFTAAQQRDFIAQDLGPALARSPHRTRLLMLDDQRIHLPHWAKVVLGNATAARYVAGLAVHWYLDAIVPPGCSLEATHKLFPDHFLLYTEACTGFFMFRFAVSLGCWERGDHYSYSILTVMNHFVSGWTDWNLVLDLEGGPNWVKNFVDSPVIVDGSKDVFYKQPMFYHMGHFSKFIPEGSRRVGLHSSHRCLLCQLEHVAVLRPDGALVLVVLNRFGRDVPFGIRDPAMGFIETVAPAHSIQTYLWRQQ
SIO_010081: LOC107214570
subclass of: SO_0000673
so part of: LOC107214570
location: join(176008..176074,176272..176463,176539..176685,176814..176947,177283..177455,177557..177791,178512..178736,178805..178968,179046..179171,179247..179352)
location: region:176008-179352:1
so has part: feature:176008-176074:1:exon
so has part: feature:176272-176463:1:exon
so has part: feature:176539-176685:1:exon
so has part: feature:176814-176947:1:exon
so has part: feature:177283-177455:1:exon
so has part: feature:177557-177791:1:exon
so has part: feature:178512-178736:1:exon
so has part: feature:178805-178968:1:exon
so has part: feature:179046-179171:1:exon
so has part: feature:179247-179352:1:exon

XP_015505586.1
type: Protein
SIO_000068: ncbiprotein

position:176008:1
position: 176008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179352:1
position: 179352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176008-176074:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176272-176463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176539-176685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176814-176947:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:177283-177455:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:177557-177791:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:178512-178736:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:178805-178968:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:179046-179171:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:179247-179352:1:exon

LOC107214536
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 181839..186377
location: region:181839-186377:1
so has part: feature:181839-186377:1:exon
subclass of: SO_0000010

107214536
type: Gene
SIO_000068: ncbigene

position:181839:1
position: 181839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186377:1
position: 186377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181839-186377:1:exon

LOC107214536
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214536
product: lysosomal acid glucosylceramidase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015650025.3
SIO_010081: LOC107214536
subclass of: SO_0000673
so part of: LOC107214536
location: join(181839..182334,183285..183399,183525..183716,183793..183939,184074..184207,184714..184886,184986..185223,185303..185527,185617..185780,185858..185983,186064..186377)
location: region:181839-186377:1
so has part: feature:181839-182334:1:exon
so has part: feature:183285-183399:1:exon
so has part: feature:183525-183716:1:exon
so has part: feature:183793-183939:1:exon
so has part: feature:184074-184207:1:exon
so has part: feature:184714-184886:1:exon
so has part: feature:184986-185223:1:exon
so has part: feature:185303-185527:1:exon
so has part: feature:185617-185780:1:exon
so has part: feature:185858-185983:1:exon
so has part: feature:186064-186377:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181839-182334:1:exon

position:182334:1
position: 182334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:183285-183399:1:exon

position:183285:1
position: 183285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183399:1
position: 183399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:183525-183716:1:exon

position:183525:1
position: 183525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183716:1
position: 183716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183793-183939:1:exon

position:183793:1
position: 183793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183939:1
position: 183939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:184074-184207:1:exon

position:184074:1
position: 184074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184207:1
position: 184207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:184714-184886:1:exon

position:184714:1
position: 184714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184886:1
position: 184886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:184986-185223:1:exon

position:184986:1
position: 184986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185223:1
position: 185223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:185303-185527:1:exon

position:185303:1
position: 185303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185527:1
position: 185527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:185617-185780:1:exon

position:185617:1
position: 185617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185780:1
position: 185780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:185858-185983:1:exon

position:185858:1
position: 185858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185983:1
position: 185983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:186064-186377:1:exon

position:186064:1
position: 186064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214536
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysosomal acid glucosylceramidase-like
translation: MEALEGLGSILPSPASLWPLEQVSGELCKCCGVGKARWSQVAKSSPGSSSNTESHELSHSKLTFPAPPDASPPSKHSQDTGPATAATETQREVVWQQLQSVHWHCLSRCSRGAMGPGCASVLGWLLLAQVALQVTGGRPCDAKDFGHGSLVCACSATYCDTLDPLVLPAPGSYVKYESSKAGKRLERSEGSFQHNAKSPDFHLTLDTAQRYQKVKGFGGSITDAAAINIQSLSKDAQKHLLRSYFSEEGIEYNLVRVPMASTDFSVRLYTYADAEGDFELRHFNLTEEDTHMKIPILQAAQAVAKRPLSLYASPWTSPVWMKTNGAMTGRGTLKGSPGDKYHRAWAKYFIRFLDEYAKYNLTFWAVTAGNEPTAGEIVFYPFQCLGFSPEHQRDFIAQDLGPALANSSHRHVQLIILDDQRVMLPYWAEVVLKDPVAASYISGIGIHWYLDFLAPIDLTLSITHHLFPDYFLLSTEASTGSYFWEPRVVLGGWDRGSKYSHSILTNLNNYVTGWTDWNLALDMEGGPNWSKNYVDSPVIVDSSKDVFYKQPMFYHLGHFSKFIPEGSQRVGLAVSKKCRRCDLEHSAFLRPDGAIVLVVLNRSPMDVSFGISDPRVGFFEAVAPSDSIQTFLWKQPA
SIO_010081: LOC107214536
subclass of: SO_0000673
so part of: LOC107214536
location: join(182044..182334,183285..183399,183525..183716,183793..183939,184074..184207,184714..184886,184986..185223,185303..185527,185617..185780,185858..185983,186064..186172)
location: region:182044-186172:1
so has part: feature:182044-182334:1:exon
so has part: feature:183285-183399:1:exon
so has part: feature:183525-183716:1:exon
so has part: feature:183793-183939:1:exon
so has part: feature:184074-184207:1:exon
so has part: feature:184714-184886:1:exon
so has part: feature:184986-185223:1:exon
so has part: feature:185303-185527:1:exon
so has part: feature:185617-185780:1:exon
so has part: feature:185858-185983:1:exon
so has part: feature:186064-186172:1:exon

XP_015505511.1
type: Protein
SIO_000068: ncbiprotein

position:182044:1
position: 182044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186172:1
position: 186172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182044-182334:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:183285-183399:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183525-183716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183793-183939:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:184074-184207:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:184714-184886:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:184986-185223:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185303-185527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185617-185780:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:185858-185983:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:186064-186172:1:exon

MTX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MTX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(187764..190773)
location: region:187764-190773:-1
so has part: feature:187764-190773:-1:exon
subclass of: SO_0000010

107214596
type: Gene
SIO_000068: ncbigene

position:187764:-1
position: 187764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190773:-1
position: 190773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187764-190773:-1:exon

MTX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MTX1
product: metaxin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_015650170.3
SIO_010081: MTX1
subclass of: SO_0000673
so part of: MTX1
location: complement(join(187764..188153,188265..188419,188675..188751,188895..189077,189366..189458,189597..189676,190486..190555,190651..190773))
location: region:187764-190773:-1
so has part: feature:190651-190773:-1:exon
so has part: feature:190486-190555:-1:exon
so has part: feature:189597-189676:-1:exon
so has part: feature:189366-189458:-1:exon
so has part: feature:188895-189077:-1:exon
so has part: feature:188675-188751:-1:exon
so has part: feature:188265-188419:-1:exon
so has part: feature:187764-188153:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190651-190773:-1:exon

position:190651:-1
position: 190651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190486-190555:-1:exon

position:190486:-1
position: 190486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190555:-1
position: 190555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189597-189676:-1:exon

position:189597:-1
position: 189597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189676:-1
position: 189676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189366-189458:-1:exon

position:189366:-1
position: 189366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189458:-1
position: 189458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:188895-189077:-1:exon

position:188895:-1
position: 188895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189077:-1
position: 189077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:188675-188751:-1:exon

position:188675:-1
position: 188675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188751:-1
position: 188751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:188265-188419:-1:exon

position:188265:-1
position: 188265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188419:-1
position: 188419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:187764-188153:-1:exon

position:188153:-1
position: 188153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MTX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metaxin-1
translation: MAAPMELFCWAGGWGLPSVDPDCLAVLTYARFTGAPLKVHRVTSPWRSPSGHLPALRTQDEGTISKPQQIITHLRKQKYNADYDLSATQSADTLAFVSLLEEKLLPVLIHTFWVDAKNYVEHTRKWYAETIPFPLNFFLPNAMHKRHLERLQLMWGDDYMEDEEKLEKELYREARECLTLLSQRLGSQKFFFGDSPASLDALVFSRLAPLLKAKLPNGKLQQHLKSLQNLCNYCTSILSLYFPWDRGDPLTGAPRAAGTDGSEAEEDPHKRRKQLLSVLVGLAAMLGYAFLSGIVSIQRGSVGPAGRQPVTLEEEEEEEEE
SIO_010081: MTX1
subclass of: SO_0000673
so part of: MTX1
location: complement(join(187927..188153,188265..188419,188675..188751,188895..189077,189366..189458,189597..189676,190486..190555,190651..190731))
location: region:187927-190731:-1
so has part: feature:190651-190731:-1:exon
so has part: feature:190486-190555:-1:exon
so has part: feature:189597-189676:-1:exon
so has part: feature:189366-189458:-1:exon
so has part: feature:188895-189077:-1:exon
so has part: feature:188675-188751:-1:exon
so has part: feature:188265-188419:-1:exon
so has part: feature:187927-188153:-1:exon

XP_015505656.1
type: Protein
SIO_000068: ncbiprotein

position:187927:-1
position: 187927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190731:-1
position: 190731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190651-190731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:190486-190555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189597-189676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189366-189458:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188895-189077:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188675-188751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188265-188419:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187927-188153:-1:exon

THBS3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: THBS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 192444..199797
location: region:192444-199797:1
so has part: feature:192444-199797:1:exon
subclass of: SO_0000010

107214594
type: Gene
SIO_000068: ncbigene

position:192444:1
position: 192444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199797:1
position: 199797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192444-199797:1:exon

THBS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: THBS3
product: thrombospondin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015650168.2
SIO_010081: THBS3
subclass of: SO_0000673
so part of: THBS3
location: join(192444..192550,193264..193470,193628..193884,193977..194079,194291..194317,194582..194664,194759..194810,194900..195048,195204..195344,195497..195574,195657..195809,195911..196021,196106..196213,196437..196596,196684..196802,196926..196978,197139..197332,197407..197585,197698..197746,197899..198095,198183..198355,199204..199343,199498..199797)
location: region:192444-199797:1
so has part: feature:192444-192550:1:exon
so has part: feature:193264-193470:1:exon
so has part: feature:193628-193884:1:exon
so has part: feature:193977-194079:1:exon
so has part: feature:194291-194317:1:exon
so has part: feature:194582-194664:1:exon
so has part: feature:194759-194810:1:exon
so has part: feature:194900-195048:1:exon
so has part: feature:195204-195344:1:exon
so has part: feature:195497-195574:1:exon
so has part: feature:195657-195809:1:exon
so has part: feature:195911-196021:1:exon
so has part: feature:196106-196213:1:exon
so has part: feature:196437-196596:1:exon
so has part: feature:196684-196802:1:exon
so has part: feature:196926-196978:1:exon
so has part: feature:197139-197332:1:exon
so has part: feature:197407-197585:1:exon
so has part: feature:197698-197746:1:exon
so has part: feature:197899-198095:1:exon
so has part: feature:198183-198355:1:exon
so has part: feature:199204-199343:1:exon
so has part: feature:199498-199797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192444-192550:1:exon

position:192550:1
position: 192550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:193264-193470:1:exon

position:193264:1
position: 193264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193470:1
position: 193470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:193628-193884:1:exon

position:193628:1
position: 193628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193884:1
position: 193884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:193977-194079:1:exon

position:193977:1
position: 193977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194079:1
position: 194079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194291-194317:1:exon

position:194291:1
position: 194291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194317:1
position: 194317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194582-194664:1:exon

position:194582:1
position: 194582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194664:1
position: 194664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:194759-194810:1:exon

position:194759:1
position: 194759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194810:1
position: 194810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:194900-195048:1:exon

position:194900:1
position: 194900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195048:1
position: 195048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:195204-195344:1:exon

position:195204:1
position: 195204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195344:1
position: 195344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:195497-195574:1:exon

position:195497:1
position: 195497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195574:1
position: 195574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:195657-195809:1:exon

position:195657:1
position: 195657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195809:1
position: 195809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:195911-196021:1:exon

position:195911:1
position: 195911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196021:1
position: 196021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:196106-196213:1:exon

position:196106:1
position: 196106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196213:1
position: 196213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:196437-196596:1:exon

position:196437:1
position: 196437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196596:1
position: 196596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:196684-196802:1:exon

position:196684:1
position: 196684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196802:1
position: 196802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:196926-196978:1:exon

position:196926:1
position: 196926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196978:1
position: 196978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:197139-197332:1:exon

position:197139:1
position: 197139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197332:1
position: 197332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:197407-197585:1:exon

position:197407:1
position: 197407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197585:1
position: 197585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:197698-197746:1:exon

position:197698:1
position: 197698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197746:1
position: 197746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:197899-198095:1:exon

position:197899:1
position: 197899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198095:1
position: 198095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:198183-198355:1:exon

position:198183:1
position: 198183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:198355:1
position: 198355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:199204-199343:1:exon

position:199204:1
position: 199204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199343:1
position: 199343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:199498-199797:1:exon

position:199498:1
position: 199498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

THBS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: THBS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thrombospondin-3
translation: MGAPGSPALLALLLLGAAAAARQGLQVIDLLLVSEARQMASVAHKIRMELLTVNDVYLLSTFRLPPKQGGTLFGLYSKKDNTRWLEVSVVGKINKVLVRYLREDNKVHSVNLQHAHVADGQSHSVIVRLSGLRRDTLSVELYVDCKQMDSSVGLPELSEIPLAEVESIEVRTGLKAYQRMQGFVESMKLILGGSMSRVGALSECPFQGDESIHSAVTSVLASILGEQTKALVTQLTLFNRVLTELREDIRDQVKEMSLIRNTIMECQVCGFHEHRSRCNPNPCFSGVDCMETYEYPGYRCGPCPPGLEGNGTHCADIEECAHANPCFPGSKCINTAPGFRCEPCPRGYRGNTVSGVGVDYARASKQVCTDIDECNDGNNGGCDPNSICTNTLGSYKCGPCKSGFAGNQTSGCVPQRSCSTPTSNPCDINGFCLFERNGEISCACNVGWAGNGNVCGPDTDLDGYPDEPLPCIDNNKHCKQDNCRLTPNSGQEDADNDGIGDQCDDDADGDGVKNVEDNCRLFPNKDQQNSDTDSFGDACDNCPNVPNNDQRDTDSNGEGDACDNDIDGDGIPNMLDNCPKVPNPLQTDRDEDGVGDACDSCPEMSNPTQTDMDSDLVGDICDTNEDSDGDGHQDTKDNCAEIPNSSQLDSDNDGLGDDCDNDDDNDGIPDYVAPGPDNCRLIPNPNQKDSDGNGVGDVCEEDFDNDTVVDQLDVCPESAEVTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTITDDDYAGFIFSYQDSASFYVVMWKQTEQTYWQATPFRAVAEPGLQLKAVKSSTGPGEHLRNALWHTGHTPDHVRLLWKDPRNVGWRDKTSYRWQLAHRPQVGYIRVRLYEGPQLVADSGVIIDTTMRGGRLGVFCFSQENIIWSNLQYRCNDTIPADFEPFRRFLLEGRE
SIO_010081: THBS3
subclass of: SO_0000673
so part of: THBS3
location: join(192472..192550,193264..193470,193628..193884,193977..194079,194291..194317,194582..194664,194759..194810,194900..195048,195204..195344,195497..195574,195657..195809,195911..196021,196106..196213,196437..196596,196684..196802,196926..196978,197139..197332,197407..197585,197698..197746,197899..198095,198183..198355,199204..199343,199498..199556)
location: region:192472-199556:1
so has part: feature:192472-192550:1:exon
so has part: feature:193264-193470:1:exon
so has part: feature:193628-193884:1:exon
so has part: feature:193977-194079:1:exon
so has part: feature:194291-194317:1:exon
so has part: feature:194582-194664:1:exon
so has part: feature:194759-194810:1:exon
so has part: feature:194900-195048:1:exon
so has part: feature:195204-195344:1:exon
so has part: feature:195497-195574:1:exon
so has part: feature:195657-195809:1:exon
so has part: feature:195911-196021:1:exon
so has part: feature:196106-196213:1:exon
so has part: feature:196437-196596:1:exon
so has part: feature:196684-196802:1:exon
so has part: feature:196926-196978:1:exon
so has part: feature:197139-197332:1:exon
so has part: feature:197407-197585:1:exon
so has part: feature:197698-197746:1:exon
so has part: feature:197899-198095:1:exon
so has part: feature:198183-198355:1:exon
so has part: feature:199204-199343:1:exon
so has part: feature:199498-199556:1:exon

XP_015505654.1
type: Protein
SIO_000068: ncbiprotein

position:192472:1
position: 192472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199556:1
position: 199556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192472-192550:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193264-193470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:193628-193884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193977-194079:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194291-194317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194582-194664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194759-194810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:194900-195048:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:195204-195344:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:195497-195574:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:195657-195809:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:195911-196021:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:196106-196213:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:196437-196596:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:196684-196802:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:196926-196978:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:197139-197332:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:197407-197585:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:197698-197746:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:197899-198095:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:198183-198355:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:199204-199343:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:199498-199556:1:exon

MUC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MUC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 203227..207420
location: region:203227-207420:1
so has part: feature:203227-207420:1:exon
subclass of: SO_0000010

107214595
type: Gene
SIO_000068: ncbigene

position:203227:1
position: 203227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207420:1
position: 207420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203227-207420:1:exon

MUC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MUC1
product: mucin 1, cell surface associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015650169.1
SIO_010081: MUC1
subclass of: SO_0000673
so part of: MUC1
location: join(203227..203384,204181..204782,204974..205047,205157..205299,205575..205693,205797..205943,206824..207420)
location: region:203227-207420:1
so has part: feature:203227-203384:1:exon
so has part: feature:204181-204782:1:exon
so has part: feature:204974-205047:1:exon
so has part: feature:205157-205299:1:exon
so has part: feature:205575-205693:1:exon
so has part: feature:205797-205943:1:exon
so has part: feature:206824-207420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:203227-203384:1:exon

position:203384:1
position: 203384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:204181-204782:1:exon

position:204181:1
position: 204181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:204782:1
position: 204782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:204974-205047:1:exon

position:204974:1
position: 204974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205047:1
position: 205047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:205157-205299:1:exon

position:205157:1
position: 205157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205299:1
position: 205299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:205575-205693:1:exon

position:205575:1
position: 205575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205693:1
position: 205693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:205797-205943:1:exon

position:205797:1
position: 205797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205943:1
position: 205943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:206824-207420:1:exon

position:206824:1
position: 206824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MUC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MUC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucin-1
translation: MAFTVLLLLLVLGTGTRAMTTETTMEMETTETTTVEMTTETTTTTLSPNIFPKSTGGSRPRTSVFPYATVFPSINTTNFQFGNHSRGNSTSNSTVVPVPSSPAVPHANATSNSSWIPHNGSSAAPTTMDGTRGNRSTSAQVFPTQITSEGSTAHRQTPTQHGPNPSKTTAQLPAAVQLLVRVPLSFRIINRSFNESLRDPASEEYRSLSRTVLAMFEHVFGCAGCMGTQTYAGCSELRYSQGSVEVQSTLVFGNGSDAVTPNAAERRLRKSLDQNGFIMGLQLDSIQSSTAAMFPAPVPMVPDWAIALLVLVSILLLFSIFTCLLLMSTCTCRRKSRGKLDLLSQKDSYHPMAEYLQYQSHGRYVSPNSKANPYSQVAGSSTTRAGTFTYTNPTAGSDNL
SIO_010081: MUC1
subclass of: SO_0000673
so part of: MUC1
location: join(203342..203384,204181..204782,204974..205047,205157..205299,205575..205693,205797..205943,206824..206898)
location: region:203342-206898:1
so has part: feature:203342-203384:1:exon
so has part: feature:204181-204782:1:exon
so has part: feature:204974-205047:1:exon
so has part: feature:205157-205299:1:exon
so has part: feature:205575-205693:1:exon
so has part: feature:205797-205943:1:exon
so has part: feature:206824-206898:1:exon

XP_015505655.1
type: Protein
SIO_000068: ncbiprotein

position:203342:1
position: 203342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206898:1
position: 206898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:203342-203384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:204181-204782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:204974-205047:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:205157-205299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:205575-205693:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:205797-205943:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:206824-206898:1:exon

TRIM46
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TRIM46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(209583..217217)
location: region:209583-217217:-1
so has part: feature:209583-217217:-1:exon
subclass of: SO_0000010

107214507
type: Gene
SIO_000068: ncbigene

position:209583:-1
position: 209583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217217:-1
position: 217217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209583-217217:-1:exon

TRIM46
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TRIM46
product: tripartite motif containing 46
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015649994.3
SIO_010081: TRIM46
subclass of: SO_0000673
so part of: TRIM46
location: complement(join(209583..210266,210402..210699,210786..211085,212919..213040,213124..213377,213493..213588,213710..213853,214350..214693,215237..215492,217092..217217))
location: region:209583-217217:-1
so has part: feature:217092-217217:-1:exon
so has part: feature:215237-215492:-1:exon
so has part: feature:214350-214693:-1:exon
so has part: feature:213710-213853:-1:exon
so has part: feature:213493-213588:-1:exon
so has part: feature:213124-213377:-1:exon
so has part: feature:212919-213040:-1:exon
so has part: feature:210786-211085:-1:exon
so has part: feature:210402-210699:-1:exon
so has part: feature:209583-210266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:217092-217217:-1:exon

position:217092:-1
position: 217092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:215237-215492:-1:exon

position:215237:-1
position: 215237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215492:-1
position: 215492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:214350-214693:-1:exon

position:214350:-1
position: 214350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214693:-1
position: 214693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:213710-213853:-1:exon

position:213710:-1
position: 213710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213853:-1
position: 213853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:213493-213588:-1:exon

position:213493:-1
position: 213493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213588:-1
position: 213588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:213124-213377:-1:exon

position:213124:-1
position: 213124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213377:-1
position: 213377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:212919-213040:-1:exon

position:212919:-1
position: 212919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:213040:-1
position: 213040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:210786-211085:-1:exon

position:210786:-1
position: 210786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211085:-1
position: 211085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:210402-210699:-1:exon

position:210402:-1
position: 210402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210699:-1
position: 210699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:209583-210266:-1:exon

position:210266:-1
position: 210266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM46
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TRIM46
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tripartite motif-containing protein 46
translation: MAEGEDLQTFTSIMDALVRISTSMKNMERELVCPVCKEMYKQPLALPCTHNVCHVCASEVLLQHGHLYCDPTSEPTSPAATPSTRSPRLGRRAVPKPDRLDRLLKSGFGTYPGRKRGAVHPQTVSFPCPACQRDVDLGERGLGSLFRNLTLERVVERYRQTINISAAIMCQFCKPPQLEATKGCTECKSSFCNECFKLYHPWGTQKAQHEPTPPTLTFRPKGLMCPEHKEEVTHYCKTCQRLVCQLCRVRRTHTSHKITPVLSAYQALREKLTKSLAYILSSQDTVQTQIAELEETVKHTEVNGSQAKEEVSQLIQGLCAMLEEKRATLLQAIEECQQERLASLHGQIREHQAMLENSGMVGYAQEVLKETDHPCFVQAAKQLHNRILRATDSLQSFRPAANASFSHFQLDVSRELKLLTDLAFIRAPEAPVIDTQRTYTYDQIFLCWRLPQHSPPAWHYTVEFRKTDAKAKGLKLWQRREEVRGTCALVEYLDTDSVYVLRVKGYNKAGFGDYSEDIYLHTPPAPVLNFFLDNRWGFNRDRLAISKDQRAVRSVPGIPMLFAAERLMTSCHLSIDLVIGDVAITQGKSYWACCVDPSSYLVKVGVGLESKLQEWFQVPQDVVSPRYDPDSGHDSGAEDTTVEAPPPYAFLTIGMGKILLSHGSALTSRDPNGCTVPLPPRIGICLDYEQGKVSFYDAVSFRELWECGVDCSGPICPAFCFIGGGALHLQELVANKQERKVTIGNFAKLD
SIO_010081: TRIM46
subclass of: SO_0000673
so part of: TRIM46
location: complement(join(209891..210266,210402..210699,210786..211085,212919..213040,213124..213377,213493..213588,213710..213853,214350..214693,215237..215492,217092..217154))
location: region:209891-217154:-1
so has part: feature:217092-217154:-1:exon
so has part: feature:215237-215492:-1:exon
so has part: feature:214350-214693:-1:exon
so has part: feature:213710-213853:-1:exon
so has part: feature:213493-213588:-1:exon
so has part: feature:213124-213377:-1:exon
so has part: feature:212919-213040:-1:exon
so has part: feature:210786-211085:-1:exon
so has part: feature:210402-210699:-1:exon
so has part: feature:209891-210266:-1:exon

XP_015505480.1
type: Protein
SIO_000068: ncbiprotein

position:209891:-1
position: 209891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:217154:-1
position: 217154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:217092-217154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:215237-215492:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:214350-214693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:213710-213853:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:213493-213588:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:213124-213377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212919-213040:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210786-211085:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:210402-210699:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:209891-210266:-1:exon

DPM3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: DPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 218550..220633
location: region:218550-220633:1
so has part: feature:218550-220633:1:exon
subclass of: SO_0000010

107214535
type: Gene
SIO_000068: ncbigene

position:218550:1
position: 218550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220633:1
position: 220633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218550-220633:1:exon

DPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DPM3
product: dolichyl-phosphate mannosyltransferase subunit 3, regulatory, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_033519754.1
SIO_010081: DPM3
subclass of: SO_0000673
so part of: DPM3
location: join(218550..218575,218800..218866,220323..220633)
location: region:218550-220633:1
so has part: feature:218550-218575:1:exon
so has part: feature:218800-218866:1:exon
so has part: feature:220323-220633:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:218550-218575:1:exon

position:218575:1
position: 218575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:218800-218866:1:exon

position:218800:1
position: 218800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:218866:1
position: 218866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:220323-220633:1:exon

position:220323:1
position: 220323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DPM3
product: dolichyl-phosphate mannosyltransferase subunit 3, regulatory, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015650022.3
SIO_010081: DPM3
subclass of: SO_0000673
so part of: DPM3
location: join(219291..219464,220323..220633)
location: region:219291-220633:1
so has part: feature:219291-219464:1:exon
so has part: feature:220323-220633:1:exon

position:219291:1
position: 219291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219291-219464:1:exon

position:219464:1
position: 219464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220323-220633:1:exon

DPM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DPM3
product: dolichyl-phosphate mannosyltransferase subunit 3, regulatory, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_015650021.3
SIO_010081: DPM3
subclass of: SO_0000673
so part of: DPM3
location: join(219981..220090,220323..220633)
location: region:219981-220633:1
so has part: feature:219981-220090:1:exon
so has part: feature:220323-220633:1:exon

position:219981:1
position: 219981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:219981-220090:1:exon

position:220090:1
position: 220090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:220323-220633:1:exon

DPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichol-phosphate mannosyltransferase subunit 3
translation: MTKLGQWLCGLAVLGSAWAALALAPPQLQPPAPLRQALLPLPVYLLVAFGCYSLATVGYRLATFNDCEEAAAELQEHIRAARADLRRRGLRLGPQ
SIO_010081: DPM3
subclass of: SO_0000673
so part of: DPM3
location: 220329..220616
location: region:220329-220616:1
so has part: feature:220329-220616:1:exon

XP_033375645.1
type: Protein
SIO_000068: ncbiprotein

position:220329:1
position: 220329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220616:1
position: 220616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220329-220616:1:exon

DPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichol-phosphate mannosyltransferase subunit 3
translation: MTKLGQWLCGLAVLGSAWAALALAPPQLQPPAPLRQALLPLPVYLLVAFGCYSLATVGYRLATFNDCEEAAAELQEHIRAARADLRRRGLRLGPQ
SIO_010081: DPM3
subclass of: SO_0000673
so part of: DPM3
location: 220329..220616
location: region:220329-220616:1
so has part: feature:220329-220616:1:exon

XP_015505507.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220329-220616:1:exon

DPM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DPM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichol-phosphate mannosyltransferase subunit 3
translation: MTKLGQWLCGLAVLGSAWAALALAPPQLQPPAPLRQALLPLPVYLLVAFGCYSLATVGYRLATFNDCEEAAAELQEHIRAARADLRRRGLRLGPQ
SIO_010081: DPM3
subclass of: SO_0000673
so part of: DPM3
location: 220329..220616
location: region:220329-220616:1
so has part: feature:220329-220616:1:exon

XP_015505508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:220329-220616:1:exon

SLC50A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SLC50A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(222961..225232)
location: region:222961-225232:-1
so has part: feature:222961-225232:-1:exon
subclass of: SO_0000010

107214533
type: Gene
SIO_000068: ncbigene

position:222961:-1
position: 222961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225232:-1
position: 225232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:222961-225232:-1:exon

SLC50A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SLC50A1
product: solute carrier family 50 member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_015650020.3
SIO_010081: SLC50A1
subclass of: SO_0000673
so part of: SLC50A1
location: complement(join(222961..223372,223814..223933,223999..224157,224231..224354,224455..224532,225110..225232))
location: region:222961-225232:-1
so has part: feature:225110-225232:-1:exon
so has part: feature:224455-224532:-1:exon
so has part: feature:224231-224354:-1:exon
so has part: feature:223999-224157:-1:exon
so has part: feature:223814-223933:-1:exon
so has part: feature:222961-223372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225110-225232:-1:exon

position:225110:-1
position: 225110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224455-224532:-1:exon

position:224455:-1
position: 224455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224532:-1
position: 224532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:224231-224354:-1:exon

position:224231:-1
position: 224231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224354:-1
position: 224354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:223999-224157:-1:exon

position:223999:-1
position: 223999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224157:-1
position: 224157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:223814-223933:-1:exon

position:223814:-1
position: 223814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223933:-1
position: 223933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:222961-223372:-1:exon

position:223372:-1
position: 223372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC50A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SLC50A1
product: solute carrier family 50 member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015650019.3
SIO_010081: SLC50A1
subclass of: SO_0000673
so part of: SLC50A1
location: complement(join(222961..223372,223814..223933,223999..224157,224231..224354,224455..224574,225110..225232))
location: region:222961-225232:-1
so has part: feature:225110-225232:-1:exon
so has part: feature:224455-224574:-1:exon
so has part: feature:224231-224354:-1:exon
so has part: feature:223999-224157:-1:exon
so has part: feature:223814-223933:-1:exon
so has part: feature:222961-223372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225110-225232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224455-224574:-1:exon

position:224574:-1
position: 224574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:224231-224354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223999-224157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223814-223933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:222961-223372:-1:exon

SLC50A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SLC50A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sugar transporter SWEET1 isoform X4
translation: MVLSVLAGVCLAATLAMFATGLSDLRQMLATKSVENIQFLPFLTTDANNLSWLGYGCLKGDGTVITVNAIGAVLQTLYILVYLYYSPAKRPVLLQVLLLLALVVTGYGYFTILVDTGTRLTHLGLFCSIFTITMYLSPLADLAKVVRSKSTRCLSFPLTVTTLVASSSWTLYGLQLHDPYITVPNVPGIVTSLVRFWLFQRYRPEQDKPYSPLPA
SIO_010081: SLC50A1
subclass of: SO_0000673
so part of: SLC50A1
location: complement(join(223271..223372,223814..223933,223999..224157,224231..224354,224455..224532,225110..225174))
location: region:223271-225174:-1
so has part: feature:225110-225174:-1:exon
so has part: feature:224455-224532:-1:exon
so has part: feature:224231-224354:-1:exon
so has part: feature:223999-224157:-1:exon
so has part: feature:223814-223933:-1:exon
so has part: feature:223271-223372:-1:exon

XP_015505506.1
type: Protein
SIO_000068: ncbiprotein

position:223271:-1
position: 223271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225174:-1
position: 225174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225110-225174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224455-224532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224231-224354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223999-224157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223814-223933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223271-223372:-1:exon

SLC50A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SLC50A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sugar transporter SWEET1 isoform X3
translation: MVLSVLAGVCLAATLAMFATGLTAQHPGGCCTAPPRSDLRQMLATKSVENIQFLPFLTTDANNLSWLGYGCLKGDGTVITVNAIGAVLQTLYILVYLYYSPAKRPVLLQVLLLLALVVTGYGYFTILVDTGTRLTHLGLFCSIFTITMYLSPLADLAKVVRSKSTRCLSFPLTVTTLVASSSWTLYGLQLHDPYITVPNVPGIVTSLVRFWLFQRYRPEQDKPYSPLPA
SIO_010081: SLC50A1
subclass of: SO_0000673
so part of: SLC50A1
location: complement(join(223271..223372,223814..223933,223999..224157,224231..224354,224455..224574,225110..225174))
location: region:223271-225174:-1
so has part: feature:225110-225174:-1:exon
so has part: feature:224455-224574:-1:exon
so has part: feature:224231-224354:-1:exon
so has part: feature:223999-224157:-1:exon
so has part: feature:223814-223933:-1:exon
so has part: feature:223271-223372:-1:exon

XP_015505505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225110-225174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224455-224574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224231-224354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223999-224157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223814-223933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223271-223372:-1:exon

SLC50A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SLC50A1
product: solute carrier family 50 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_015650018.3
SIO_010081: SLC50A1
subclass of: SO_0000673
so part of: SLC50A1
location: complement(join(223403..223933,223999..224157,224231..224354,224455..224532,225110..225232))
location: region:223403-225232:-1
so has part: feature:225110-225232:-1:exon
so has part: feature:224455-224532:-1:exon
so has part: feature:224231-224354:-1:exon
so has part: feature:223999-224157:-1:exon
so has part: feature:223403-223933:-1:exon

position:223403:-1
position: 223403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225110-225232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224455-224532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224231-224354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223999-224157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223403-223933:-1:exon

SLC50A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SLC50A1
product: solute carrier family 50 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015650017.3
SIO_010081: SLC50A1
subclass of: SO_0000673
so part of: SLC50A1
location: complement(join(223403..223933,223999..224157,224231..224354,224455..224574,225110..225232))
location: region:223403-225232:-1
so has part: feature:225110-225232:-1:exon
so has part: feature:224455-224574:-1:exon
so has part: feature:224231-224354:-1:exon
so has part: feature:223999-224157:-1:exon
so has part: feature:223403-223933:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225110-225232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224455-224574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224231-224354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223999-224157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223403-223933:-1:exon

SLC50A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SLC50A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sugar transporter SWEET1 isoform X2
translation: MVLSVLAGVCLAATLAMFATGLSDLRQMLATKSVENIQFLPFLTTDANNLSWLGYGCLKGDGTVITVNAIGAVLQTLYILVYLYYSPAKRPVLLQVLLLLALVVTGYGYFTILVDTGTRLTHLGLFCSIFTITMYLSPLADLAKVVRSKSTRCLSFPLTVTTLVASSSWTLYGLQLHDPYITVGWGGGTPRGVVPSHSIPSLIMSHPHPTLACFIRIPPFSIPFCCVPLLPHFTPSHSYLTPPPSHPIPSPSRSTPSYPIPPHSPLHGSAEHLAWGRPCSAPHVSPSQG
SIO_010081: SLC50A1
subclass of: SO_0000673
so part of: SLC50A1
location: complement(join(223490..223933,223999..224157,224231..224354,224455..224532,225110..225174))
location: region:223490-225174:-1
so has part: feature:225110-225174:-1:exon
so has part: feature:224455-224532:-1:exon
so has part: feature:224231-224354:-1:exon
so has part: feature:223999-224157:-1:exon
so has part: feature:223490-223933:-1:exon

XP_015505504.1
type: Protein
SIO_000068: ncbiprotein

position:223490:-1
position: 223490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225110-225174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224455-224532:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224231-224354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223999-224157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223490-223933:-1:exon

SLC50A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SLC50A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sugar transporter SWEET1 isoform X1
translation: MVLSVLAGVCLAATLAMFATGLTAQHPGGCCTAPPRSDLRQMLATKSVENIQFLPFLTTDANNLSWLGYGCLKGDGTVITVNAIGAVLQTLYILVYLYYSPAKRPVLLQVLLLLALVVTGYGYFTILVDTGTRLTHLGLFCSIFTITMYLSPLADLAKVVRSKSTRCLSFPLTVTTLVASSSWTLYGLQLHDPYITVGWGGGTPRGVVPSHSIPSLIMSHPHPTLACFIRIPPFSIPFCCVPLLPHFTPSHSYLTPPPSHPIPSPSRSTPSYPIPPHSPLHGSAEHLAWGRPCSAPHVSPSQG
SIO_010081: SLC50A1
subclass of: SO_0000673
so part of: SLC50A1
location: complement(join(223490..223933,223999..224157,224231..224354,224455..224574,225110..225174))
location: region:223490-225174:-1
so has part: feature:225110-225174:-1:exon
so has part: feature:224455-224574:-1:exon
so has part: feature:224231-224354:-1:exon
so has part: feature:223999-224157:-1:exon
so has part: feature:223490-223933:-1:exon

XP_015505503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:225110-225174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:224455-224574:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:224231-224354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:223999-224157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223490-223933:-1:exon

EFNA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: EFNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(226223..228064)
location: region:226223-228064:-1
so has part: feature:226223-228064:-1:exon
subclass of: SO_0000010

107214604
type: Gene
SIO_000068: ncbigene

position:226223:-1
position: 226223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228064:-1
position: 228064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226223-228064:-1:exon

EFNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: EFNA1
product: ephrin A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_015650183.1
SIO_010081: EFNA1
subclass of: SO_0000673
so part of: EFNA1
location: complement(join(226223..226988,227301..227351,227611..227676,227776..228064))
location: region:226223-228064:-1
so has part: feature:227776-228064:-1:exon
so has part: feature:227611-227676:-1:exon
so has part: feature:227301-227351:-1:exon
so has part: feature:226223-226988:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:227776-228064:-1:exon

position:227776:-1
position: 227776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227611-227676:-1:exon

position:227611:-1
position: 227611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227676:-1
position: 227676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227301-227351:-1:exon

position:227301:-1
position: 227301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227351:-1
position: 227351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226223-226988:-1:exon

position:226988:-1
position: 226988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: EFNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-A1
translation: MERYTLYLVELEEYQACKPRSKEQIRWECDKPSALHGPEKFSEKFQRFTPFTLGKEFREGHSYYYISKPIHHHGEACLKLKVTVTGKGTPAPPAPASTQKGRIQADDAAAHVLRSVGQNSAMRSSSRPFTFISLLLPLLVPQGL
SIO_010081: EFNA1
subclass of: SO_0000673
so part of: EFNA1
location: complement(join(226870..226988,227301..227351,227611..227676,227776..227974))
location: region:226870-227974:-1
so has part: feature:227776-227974:-1:exon
so has part: feature:227611-227676:-1:exon
so has part: feature:227301-227351:-1:exon
so has part: feature:226870-226988:-1:exon

XP_015505669.1
type: Protein
SIO_000068: ncbiprotein

position:226870:-1
position: 226870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227974:-1
position: 227974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227776-227974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227611-227676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227301-227351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:226870-226988:-1:exon

EFNA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: EFNA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(234035..237035)
location: region:234035-237035:-1
so has part: feature:234035-237035:-1:exon
subclass of: SO_0000010

107214525
type: Gene
SIO_000068: ncbigene

position:234035:-1
position: 234035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237035:-1
position: 237035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234035-237035:-1:exon

EFNA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: EFNA3
product: ephrin A3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_033519757.1
SIO_010081: EFNA3
subclass of: SO_0000673
so part of: EFNA3
location: complement(join(234035..234785,234922..234999,235151..235216,235738..237035))
location: region:234035-237035:-1
so has part: feature:235738-237035:-1:exon
so has part: feature:235151-235216:-1:exon
so has part: feature:234922-234999:-1:exon
so has part: feature:234035-234785:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235738-237035:-1:exon

position:235738:-1
position: 235738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:235151-235216:-1:exon

position:235151:-1
position: 235151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235216:-1
position: 235216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234922-234999:-1:exon

position:234922:-1
position: 234922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234999:-1
position: 234999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:234035-234785:-1:exon

position:234785:-1
position: 234785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFNA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: EFNA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-A3
translation: MVNAEGYRTCNTSQGFKRWECNRPHAPHSPIKFSEKFQRYSAFSLGYEFRAGQEYYYISTPTHNHRRACLKMKVFVCCASTSHSGEKLAPTLPQFTLRPEVKIEDLENFNPEMPKLEKSISGTSPKREHLPLAVAAALFLMTLLAS
SIO_010081: EFNA3
subclass of: SO_0000673
so part of: EFNA3
location: complement(join(234664..234785,234922..234999,235151..235216,235738..235912))
location: region:234664-235912:-1
so has part: feature:235738-235912:-1:exon
so has part: feature:235151-235216:-1:exon
so has part: feature:234922-234999:-1:exon
so has part: feature:234664-234785:-1:exon

XP_033375648.1
type: Protein
SIO_000068: ncbiprotein

position:234664:-1
position: 234664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235912:-1
position: 235912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235738-235912:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:235151-235216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234922-234999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:234664-234785:-1:exon

EFNA4
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: EFNA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(252998..257082)
location: region:252998-257082:-1
so has part: feature:252998-257082:-1:exon
subclass of: SO_0000010

107214517
type: Gene
SIO_000068: ncbigene

position:252998:-1
position: 252998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257082:-1
position: 257082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252998-257082:-1:exon

EFNA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: EFNA4
product: ephrin A4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015650004.2
SIO_010081: EFNA4
subclass of: SO_0000673
so part of: EFNA4
location: complement(join(252998..253355,253443..253696,253773..253832,253967..254035,254904..257082))
location: region:252998-257082:-1
so has part: feature:254904-257082:-1:exon
so has part: feature:253967-254035:-1:exon
so has part: feature:253773-253832:-1:exon
so has part: feature:253443-253696:-1:exon
so has part: feature:252998-253355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254904-257082:-1:exon

position:254904:-1
position: 254904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253967-254035:-1:exon

position:253967:-1
position: 253967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254035:-1
position: 254035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:253773-253832:-1:exon

position:253773:-1
position: 253773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253832:-1
position: 253832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:253443-253696:-1:exon

position:253443:-1
position: 253443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253696:-1
position: 253696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:252998-253355:-1:exon

position:253355:-1
position: 253355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFNA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: EFNA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin-A4
translation: MPGCGRCPVGGWGKPRSPLRWGRTQQLTPPDGPPASRLVLPGRFLRDDYSIQVAINDYLDIYCPHYEGAVPSGRAETFTLFMVDREGYRGCYETPGAFKRWECNRPQAPFGPVRFSEKIQRFTPFSLGFEFQPGETYYYISVPSPESAGRCLKLRVTVCCRGTTPEPLTEVPNSQPRGRGGPEDVVPARGTAVPSQPCKPCLALVLLALLWM
SIO_010081: EFNA4
subclass of: SO_0000673
so part of: EFNA4
location: complement(join(253608..253696,253773..253832,253967..254035,254904..255324))
location: region:253608-255324:-1
so has part: feature:254904-255324:-1:exon
so has part: feature:253967-254035:-1:exon
so has part: feature:253773-253832:-1:exon
so has part: feature:253608-253696:-1:exon

XP_015505490.1
type: Protein
SIO_000068: ncbiprotein

position:253608:-1
position: 253608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255324:-1
position: 255324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254904-255324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:253967-254035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:253773-253832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:253608-253696:-1:exon

ADAM15
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ADAM15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(260039..268017)
location: region:260039-268017:-1
so has part: feature:260039-268017:-1:exon
subclass of: SO_0000010

107214603
type: Gene
SIO_000068: ncbigene

position:260039:-1
position: 260039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268017:-1
position: 268017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260039-268017:-1:exon

ADAM15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ADAM15
product: ADAM metallopeptidase domain 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015650180.2
SIO_010081: ADAM15
subclass of: SO_0000673
so part of: ADAM15
location: complement(join(260039..260178,260470..260591,260698..260769,260920..260988,261239..261347,262568..262706,262800..262911,262994..263071,263140..263290,263363..263471,263541..263736,263816..263908,264058..264235,264314..264462,264530..264614,264693..264862,264961..265029,265421..265483,265554..265725,265818..265894,266001..266079,266348..266424,267008..267111,267939..268017))
location: region:260039-268017:-1
so has part: feature:267939-268017:-1:exon
so has part: feature:267008-267111:-1:exon
so has part: feature:266348-266424:-1:exon
so has part: feature:266001-266079:-1:exon
so has part: feature:265818-265894:-1:exon
so has part: feature:265554-265725:-1:exon
so has part: feature:265421-265483:-1:exon
so has part: feature:264961-265029:-1:exon
so has part: feature:264693-264862:-1:exon
so has part: feature:264530-264614:-1:exon
so has part: feature:264314-264462:-1:exon
so has part: feature:264058-264235:-1:exon
so has part: feature:263816-263908:-1:exon
so has part: feature:263541-263736:-1:exon
so has part: feature:263363-263471:-1:exon
so has part: feature:263140-263290:-1:exon
so has part: feature:262994-263071:-1:exon
so has part: feature:262800-262911:-1:exon
so has part: feature:262568-262706:-1:exon
so has part: feature:261239-261347:-1:exon
so has part: feature:260920-260988:-1:exon
so has part: feature:260698-260769:-1:exon
so has part: feature:260470-260591:-1:exon
so has part: feature:260039-260178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267939-268017:-1:exon

position:267939:-1
position: 267939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:267008-267111:-1:exon

position:267008:-1
position: 267008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267111:-1
position: 267111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:266348-266424:-1:exon

position:266348:-1
position: 266348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266424:-1
position: 266424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:266001-266079:-1:exon

position:266001:-1
position: 266001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266079:-1
position: 266079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:265818-265894:-1:exon

position:265818:-1
position: 265818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265894:-1
position: 265894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:265554-265725:-1:exon

position:265554:-1
position: 265554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265725:-1
position: 265725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:265421-265483:-1:exon

position:265421:-1
position: 265421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265483:-1
position: 265483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:264961-265029:-1:exon

position:264961:-1
position: 264961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265029:-1
position: 265029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:264693-264862:-1:exon

position:264693:-1
position: 264693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264862:-1
position: 264862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:264530-264614:-1:exon

position:264530:-1
position: 264530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264614:-1
position: 264614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:264314-264462:-1:exon

position:264314:-1
position: 264314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264462:-1
position: 264462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:264058-264235:-1:exon

position:264058:-1
position: 264058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264235:-1
position: 264235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:263816-263908:-1:exon

position:263816:-1
position: 263816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263908:-1
position: 263908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:263541-263736:-1:exon

position:263541:-1
position: 263541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263736:-1
position: 263736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:263363-263471:-1:exon

position:263363:-1
position: 263363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263471:-1
position: 263471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:263140-263290:-1:exon

position:263140:-1
position: 263140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263290:-1
position: 263290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:262994-263071:-1:exon

position:262994:-1
position: 262994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263071:-1
position: 263071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:262800-262911:-1:exon

position:262800:-1
position: 262800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262911:-1
position: 262911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:262568-262706:-1:exon

position:262568:-1
position: 262568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262706:-1
position: 262706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:261239-261347:-1:exon

position:261239:-1
position: 261239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261347:-1
position: 261347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:260920-260988:-1:exon

position:260920:-1
position: 260920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260988:-1
position: 260988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:260698-260769:-1:exon

position:260698:-1
position: 260698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260769:-1
position: 260769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:260470-260591:-1:exon

position:260470:-1
position: 260470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260591:-1
position: 260591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:260039-260178:-1:exon

position:260178:-1
position: 260178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADAM15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ADAM15
product: ADAM metallopeptidase domain 15, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015650182.2
SIO_010081: ADAM15
subclass of: SO_0000673
so part of: ADAM15
location: complement(join(260039..260178,260470..260591,261239..261347,261603..261656,262568..262706,262800..262911,262994..263071,263140..263290,263363..263471,263541..263736,263816..263908,264058..264235,264314..264462,264530..264614,264693..264862,264961..265029,265421..265483,265554..265725,265818..265894,266001..266079,266348..266424,267008..267111,267939..268017))
location: region:260039-268017:-1
so has part: feature:267939-268017:-1:exon
so has part: feature:267008-267111:-1:exon
so has part: feature:266348-266424:-1:exon
so has part: feature:266001-266079:-1:exon
so has part: feature:265818-265894:-1:exon
so has part: feature:265554-265725:-1:exon
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so has part: feature:264961-265029:-1:exon
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so has part: feature:264058-264235:-1:exon
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so has part: feature:261239-261347:-1:exon
so has part: feature:260470-260591:-1:exon
so has part: feature:260039-260178:-1:exon

urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 3
SIO_000628: feature:266348-266424:-1:exon

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SIO_000300: 4
SIO_000628: feature:266001-266079:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:265554-265725:-1:exon

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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
SIO_000628: feature:264693-264862:-1:exon

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SIO_000300: 10
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SIO_000300: 11
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SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:263816-263908:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263541-263736:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263363-263471:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:263140-263290:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262994-263071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262800-262911:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:262568-262706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:261603-261656:-1:exon

position:261603:-1
position: 261603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261656:-1
position: 261656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:261239-261347:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:260470-260591:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:260039-260178:-1:exon

ADAM15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ADAM15
product: ADAM metallopeptidase domain 15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015650181.2
SIO_010081: ADAM15
subclass of: SO_0000673
so part of: ADAM15
location: complement(join(260039..260178,260470..260591,260698..260769,261239..261347,261603..261656,262568..262706,262800..262911,262994..263071,263140..263290,263363..263471,263541..263736,263816..263908,264058..264235,264314..264462,264530..264614,264693..264862,264961..265029,265421..265483,265554..265725,265818..265894,266001..266079,266348..266424,267008..267111,267939..268017))
location: region:260039-268017:-1
so has part: feature:267939-268017:-1:exon
so has part: feature:267008-267111:-1:exon
so has part: feature:266348-266424:-1:exon
so has part: feature:266001-266079:-1:exon
so has part: feature:265818-265894:-1:exon
so has part: feature:265554-265725:-1:exon
so has part: feature:265421-265483:-1:exon
so has part: feature:264961-265029:-1:exon
so has part: feature:264693-264862:-1:exon
so has part: feature:264530-264614:-1:exon
so has part: feature:264314-264462:-1:exon
so has part: feature:264058-264235:-1:exon
so has part: feature:263816-263908:-1:exon
so has part: feature:263541-263736:-1:exon
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so has part: feature:263140-263290:-1:exon
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so has part: feature:262800-262911:-1:exon
so has part: feature:262568-262706:-1:exon
so has part: feature:261603-261656:-1:exon
so has part: feature:261239-261347:-1:exon
so has part: feature:260698-260769:-1:exon
so has part: feature:260470-260591:-1:exon
so has part: feature:260039-260178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267939-268017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267008-267111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266348-266424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266001-266079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265818-265894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265554-265725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265421-265483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264961-265029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264693-264862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264530-264614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264314-264462:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264058-264235:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:263816-263908:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263541-263736:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263363-263471:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:263140-263290:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262994-263071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262800-262911:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:262568-262706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:261603-261656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:261239-261347:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:260698-260769:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:260470-260591:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:260039-260178:-1:exon

ADAM15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ADAM15
product: ADAM metallopeptidase domain 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015650179.2
SIO_010081: ADAM15
subclass of: SO_0000673
so part of: ADAM15
location: complement(join(260039..260178,260470..260591,260698..260769,260920..260988,261239..261347,261603..261656,262568..262706,262800..262911,262994..263071,263140..263290,263363..263471,263541..263736,263816..263908,264058..264235,264314..264462,264530..264614,264693..264862,264961..265029,265421..265483,265554..265725,265818..265894,266001..266079,266348..266424,267008..267111,267939..268017))
location: region:260039-268017:-1
so has part: feature:267939-268017:-1:exon
so has part: feature:267008-267111:-1:exon
so has part: feature:266348-266424:-1:exon
so has part: feature:266001-266079:-1:exon
so has part: feature:265818-265894:-1:exon
so has part: feature:265554-265725:-1:exon
so has part: feature:265421-265483:-1:exon
so has part: feature:264961-265029:-1:exon
so has part: feature:264693-264862:-1:exon
so has part: feature:264530-264614:-1:exon
so has part: feature:264314-264462:-1:exon
so has part: feature:264058-264235:-1:exon
so has part: feature:263816-263908:-1:exon
so has part: feature:263541-263736:-1:exon
so has part: feature:263363-263471:-1:exon
so has part: feature:263140-263290:-1:exon
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so has part: feature:262800-262911:-1:exon
so has part: feature:262568-262706:-1:exon
so has part: feature:261603-261656:-1:exon
so has part: feature:261239-261347:-1:exon
so has part: feature:260920-260988:-1:exon
so has part: feature:260698-260769:-1:exon
so has part: feature:260470-260591:-1:exon
so has part: feature:260039-260178:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:267939-268017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267008-267111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266348-266424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266001-266079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265818-265894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265554-265725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265421-265483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264961-265029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264693-264862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264530-264614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264314-264462:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264058-264235:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:263816-263908:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263541-263736:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263363-263471:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:263140-263290:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262994-263071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262800-262911:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:262568-262706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:261603-261656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:261239-261347:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:260920-260988:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:260698-260769:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:260470-260591:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:260039-260178:-1:exon

ADAM15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ADAM15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 15 isoform X2
translation: MGAMGPRLLLAAGLLLAADTGSAAGDSSQQHSEELGHSWSVTPWVLRDNQTLSLAEATQGGFPARLRVLLELEGMRLLLELEQNWELVQGTGALLYYLPDGTRVIQEPSEQEHCCYQGTVQGFPGSWANLCACAGLSGRLWLSDSRSYTLEPDTSSPQGQHVASHLRVVQLEPQSCGQGPRPGAETAEPLWPQRDKRAAAEQRFVELVMVVDHAAFQNYPSLQRVRTRTLEIANQVDVFFRPLGVRVALLAVEVWSEGDKIAVGSSARAVLERFLRWRQEELLPQLPHDNAQLLTGAHFVDVSVGMSTQASMCSPTRSGGVSKDHSVSVLVMASTVAHQLGHNLGMRHDSAGRLCNCGDLRHDRGCIMAPPTGLTPGLSFSNCSRQDLEQSLQQGQGWCLSNVPEPQLLTGSPTCGNHFVELGEECDCGLSVECTDPCCNSSSCQLMPGAVCASKDTCCQDCQLRRAGHVCRELLGECDLPEFCDGVSPRCPPDTFLQDGQPCAGGRARCYSGACATYEGQCQQLLGPGASPVSSSCMAALNTRGDERGHCGQLPNGSYVTCTQQDTSCGMLQCQHSSTHGERPEGSCQGTPLPGDEDVTDAAMVLPGTTCGPGKMCLQHRCQDISVLGDQQCQNKCHGHGVCNNHGHCHCERGWAPPACDSPGVGGSQDSGPAGLERGGSALPTALLLSALLGLALALGLCRARRAGLHKRLCQLGKGSSCQYRISQPEPCSGSNQGPPARPRPPQWRQATELQVMHGSKPAALGSARPDPPSRPLPPDPVPKAPPSDRPPPPTRPLPADPVLLSAQPPGPAKPPPPQRPLPSDPPGPSLARSETPPGHPYVTVIPARPAPAPPEA
SIO_010081: ADAM15
subclass of: SO_0000673
so part of: ADAM15
location: complement(join(260151..260178,260470..260591,260698..260769,260920..260988,261239..261347,262568..262706,262800..262911,262994..263071,263140..263290,263363..263471,263541..263736,263816..263908,264058..264235,264314..264462,264530..264614,264693..264862,264961..265029,265421..265483,265554..265725,265818..265894,266001..266079,266348..266424,267008..267111,267939..268011))
location: region:260151-268011:-1
so has part: feature:267939-268011:-1:exon
so has part: feature:267008-267111:-1:exon
so has part: feature:266348-266424:-1:exon
so has part: feature:266001-266079:-1:exon
so has part: feature:265818-265894:-1:exon
so has part: feature:265554-265725:-1:exon
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so has part: feature:264961-265029:-1:exon
so has part: feature:264693-264862:-1:exon
so has part: feature:264530-264614:-1:exon
so has part: feature:264314-264462:-1:exon
so has part: feature:264058-264235:-1:exon
so has part: feature:263816-263908:-1:exon
so has part: feature:263541-263736:-1:exon
so has part: feature:263363-263471:-1:exon
so has part: feature:263140-263290:-1:exon
so has part: feature:262994-263071:-1:exon
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so has part: feature:260920-260988:-1:exon
so has part: feature:260698-260769:-1:exon
so has part: feature:260470-260591:-1:exon
so has part: feature:260151-260178:-1:exon

XP_015505666.1
type: Protein
SIO_000068: ncbiprotein

position:260151:-1
position: 260151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268011:-1
position: 268011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267939-268011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267008-267111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266348-266424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266001-266079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265818-265894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265554-265725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265421-265483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264961-265029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264693-264862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264530-264614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264314-264462:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264058-264235:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:263816-263908:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263541-263736:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263363-263471:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:263140-263290:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262994-263071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262800-262911:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:262568-262706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:261239-261347:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:260920-260988:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:260698-260769:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:260470-260591:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:260151-260178:-1:exon

ADAM15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ADAM15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 15 isoform X4
translation: MGAMGPRLLLAAGLLLAADTGSAAGDSSQQHSEELGHSWSVTPWVLRDNQTLSLAEATQGGFPARLRVLLELEGMRLLLELEQNWELVQGTGALLYYLPDGTRVIQEPSEQEHCCYQGTVQGFPGSWANLCACAGLSGRLWLSDSRSYTLEPDTSSPQGQHVASHLRVVQLEPQSCGQGPRPGAETAEPLWPQRDKRAAAEQRFVELVMVVDHAAFQNYPSLQRVRTRTLEIANQVDVFFRPLGVRVALLAVEVWSEGDKIAVGSSARAVLERFLRWRQEELLPQLPHDNAQLLTGAHFVDVSVGMSTQASMCSPTRSGGVSKDHSVSVLVMASTVAHQLGHNLGMRHDSAGRLCNCGDLRHDRGCIMAPPTGLTPGLSFSNCSRQDLEQSLQQGQGWCLSNVPEPQLLTGSPTCGNHFVELGEECDCGLSVECTDPCCNSSSCQLMPGAVCASKDTCCQDCQLRRAGHVCRELLGECDLPEFCDGVSPRCPPDTFLQDGQPCAGGRARCYSGACATYEGQCQQLLGPGASPVSSSCMAALNTRGDERGHCGQLPNGSYVTCTQQDTSCGMLQCQHSSTHGERPEGSCQGTPLPGDEDVTDAAMVLPGTTCGPGKMCLQHRCQDISVLGDQQCQNKCHGHGVCNNHGHCHCERGWAPPACDSPGVGGSQDSGPAGLERGGSALPTALLLSALLGLALALGLCRARRAGLHKRLCQLGKGSSCQYSAETRVRFLGPGAADGWSGISQPEPCSGSNQGPPARPRPPQWRQATELQVMHGSKPPGPAKPPPPQRPLPSDPPGPSLARSETPPGHPYVTVIPARPAPAPPEA
SIO_010081: ADAM15
subclass of: SO_0000673
so part of: ADAM15
location: complement(join(260151..260178,260470..260591,261239..261347,261603..261656,262568..262706,262800..262911,262994..263071,263140..263290,263363..263471,263541..263736,263816..263908,264058..264235,264314..264462,264530..264614,264693..264862,264961..265029,265421..265483,265554..265725,265818..265894,266001..266079,266348..266424,267008..267111,267939..268011))
location: region:260151-268011:-1
so has part: feature:267939-268011:-1:exon
so has part: feature:267008-267111:-1:exon
so has part: feature:266348-266424:-1:exon
so has part: feature:266001-266079:-1:exon
so has part: feature:265818-265894:-1:exon
so has part: feature:265554-265725:-1:exon
so has part: feature:265421-265483:-1:exon
so has part: feature:264961-265029:-1:exon
so has part: feature:264693-264862:-1:exon
so has part: feature:264530-264614:-1:exon
so has part: feature:264314-264462:-1:exon
so has part: feature:264058-264235:-1:exon
so has part: feature:263816-263908:-1:exon
so has part: feature:263541-263736:-1:exon
so has part: feature:263363-263471:-1:exon
so has part: feature:263140-263290:-1:exon
so has part: feature:262994-263071:-1:exon
so has part: feature:262800-262911:-1:exon
so has part: feature:262568-262706:-1:exon
so has part: feature:261603-261656:-1:exon
so has part: feature:261239-261347:-1:exon
so has part: feature:260470-260591:-1:exon
so has part: feature:260151-260178:-1:exon

XP_015505668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267939-268011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267008-267111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266348-266424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266001-266079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265818-265894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265554-265725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265421-265483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264961-265029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264693-264862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264530-264614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264314-264462:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264058-264235:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:263816-263908:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263541-263736:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263363-263471:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:263140-263290:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262994-263071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262800-262911:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:262568-262706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:261603-261656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:261239-261347:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:260470-260591:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:260151-260178:-1:exon

ADAM15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ADAM15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 15 isoform X3
translation: MGAMGPRLLLAAGLLLAADTGSAAGDSSQQHSEELGHSWSVTPWVLRDNQTLSLAEATQGGFPARLRVLLELEGMRLLLELEQNWELVQGTGALLYYLPDGTRVIQEPSEQEHCCYQGTVQGFPGSWANLCACAGLSGRLWLSDSRSYTLEPDTSSPQGQHVASHLRVVQLEPQSCGQGPRPGAETAEPLWPQRDKRAAAEQRFVELVMVVDHAAFQNYPSLQRVRTRTLEIANQVDVFFRPLGVRVALLAVEVWSEGDKIAVGSSARAVLERFLRWRQEELLPQLPHDNAQLLTGAHFVDVSVGMSTQASMCSPTRSGGVSKDHSVSVLVMASTVAHQLGHNLGMRHDSAGRLCNCGDLRHDRGCIMAPPTGLTPGLSFSNCSRQDLEQSLQQGQGWCLSNVPEPQLLTGSPTCGNHFVELGEECDCGLSVECTDPCCNSSSCQLMPGAVCASKDTCCQDCQLRRAGHVCRELLGECDLPEFCDGVSPRCPPDTFLQDGQPCAGGRARCYSGACATYEGQCQQLLGPGASPVSSSCMAALNTRGDERGHCGQLPNGSYVTCTQQDTSCGMLQCQHSSTHGERPEGSCQGTPLPGDEDVTDAAMVLPGTTCGPGKMCLQHRCQDISVLGDQQCQNKCHGHGVCNNHGHCHCERGWAPPACDSPGVGGSQDSGPAGLERGGSALPTALLLSALLGLALALGLCRARRAGLHKRLCQLGKGSSCQYSAETRVRFLGPGAADGWSGISQPEPCSGSNQGPPARPRPPQWRQATELQVMHGSKAPPSDRPPPPTRPLPADPVLLSAQPPGPAKPPPPQRPLPSDPPGPSLARSETPPGHPYVTVIPARPAPAPPEA
SIO_010081: ADAM15
subclass of: SO_0000673
so part of: ADAM15
location: complement(join(260151..260178,260470..260591,260698..260769,261239..261347,261603..261656,262568..262706,262800..262911,262994..263071,263140..263290,263363..263471,263541..263736,263816..263908,264058..264235,264314..264462,264530..264614,264693..264862,264961..265029,265421..265483,265554..265725,265818..265894,266001..266079,266348..266424,267008..267111,267939..268011))
location: region:260151-268011:-1
so has part: feature:267939-268011:-1:exon
so has part: feature:267008-267111:-1:exon
so has part: feature:266348-266424:-1:exon
so has part: feature:266001-266079:-1:exon
so has part: feature:265818-265894:-1:exon
so has part: feature:265554-265725:-1:exon
so has part: feature:265421-265483:-1:exon
so has part: feature:264961-265029:-1:exon
so has part: feature:264693-264862:-1:exon
so has part: feature:264530-264614:-1:exon
so has part: feature:264314-264462:-1:exon
so has part: feature:264058-264235:-1:exon
so has part: feature:263816-263908:-1:exon
so has part: feature:263541-263736:-1:exon
so has part: feature:263363-263471:-1:exon
so has part: feature:263140-263290:-1:exon
so has part: feature:262994-263071:-1:exon
so has part: feature:262800-262911:-1:exon
so has part: feature:262568-262706:-1:exon
so has part: feature:261603-261656:-1:exon
so has part: feature:261239-261347:-1:exon
so has part: feature:260698-260769:-1:exon
so has part: feature:260470-260591:-1:exon
so has part: feature:260151-260178:-1:exon

XP_015505667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267939-268011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267008-267111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266348-266424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266001-266079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265818-265894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265554-265725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265421-265483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264961-265029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264693-264862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264530-264614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264314-264462:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264058-264235:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:263816-263908:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263541-263736:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263363-263471:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:263140-263290:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262994-263071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262800-262911:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:262568-262706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:261603-261656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:261239-261347:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:260698-260769:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:260470-260591:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:260151-260178:-1:exon

ADAM15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ADAM15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 15 isoform X1
translation: MGAMGPRLLLAAGLLLAADTGSAAGDSSQQHSEELGHSWSVTPWVLRDNQTLSLAEATQGGFPARLRVLLELEGMRLLLELEQNWELVQGTGALLYYLPDGTRVIQEPSEQEHCCYQGTVQGFPGSWANLCACAGLSGRLWLSDSRSYTLEPDTSSPQGQHVASHLRVVQLEPQSCGQGPRPGAETAEPLWPQRDKRAAAEQRFVELVMVVDHAAFQNYPSLQRVRTRTLEIANQVDVFFRPLGVRVALLAVEVWSEGDKIAVGSSARAVLERFLRWRQEELLPQLPHDNAQLLTGAHFVDVSVGMSTQASMCSPTRSGGVSKDHSVSVLVMASTVAHQLGHNLGMRHDSAGRLCNCGDLRHDRGCIMAPPTGLTPGLSFSNCSRQDLEQSLQQGQGWCLSNVPEPQLLTGSPTCGNHFVELGEECDCGLSVECTDPCCNSSSCQLMPGAVCASKDTCCQDCQLRRAGHVCRELLGECDLPEFCDGVSPRCPPDTFLQDGQPCAGGRARCYSGACATYEGQCQQLLGPGASPVSSSCMAALNTRGDERGHCGQLPNGSYVTCTQQDTSCGMLQCQHSSTHGERPEGSCQGTPLPGDEDVTDAAMVLPGTTCGPGKMCLQHRCQDISVLGDQQCQNKCHGHGVCNNHGHCHCERGWAPPACDSPGVGGSQDSGPAGLERGGSALPTALLLSALLGLALALGLCRARRAGLHKRLCQLGKGSSCQYSAETRVRFLGPGAADGWSGISQPEPCSGSNQGPPARPRPPQWRQATELQVMHGSKPAALGSARPDPPSRPLPPDPVPKAPPSDRPPPPTRPLPADPVLLSAQPPGPAKPPPPQRPLPSDPPGPSLARSETPPGHPYVTVIPARPAPAPPEA
SIO_010081: ADAM15
subclass of: SO_0000673
so part of: ADAM15
location: complement(join(260151..260178,260470..260591,260698..260769,260920..260988,261239..261347,261603..261656,262568..262706,262800..262911,262994..263071,263140..263290,263363..263471,263541..263736,263816..263908,264058..264235,264314..264462,264530..264614,264693..264862,264961..265029,265421..265483,265554..265725,265818..265894,266001..266079,266348..266424,267008..267111,267939..268011))
location: region:260151-268011:-1
so has part: feature:267939-268011:-1:exon
so has part: feature:267008-267111:-1:exon
so has part: feature:266348-266424:-1:exon
so has part: feature:266001-266079:-1:exon
so has part: feature:265818-265894:-1:exon
so has part: feature:265554-265725:-1:exon
so has part: feature:265421-265483:-1:exon
so has part: feature:264961-265029:-1:exon
so has part: feature:264693-264862:-1:exon
so has part: feature:264530-264614:-1:exon
so has part: feature:264314-264462:-1:exon
so has part: feature:264058-264235:-1:exon
so has part: feature:263816-263908:-1:exon
so has part: feature:263541-263736:-1:exon
so has part: feature:263363-263471:-1:exon
so has part: feature:263140-263290:-1:exon
so has part: feature:262994-263071:-1:exon
so has part: feature:262800-262911:-1:exon
so has part: feature:262568-262706:-1:exon
so has part: feature:261603-261656:-1:exon
so has part: feature:261239-261347:-1:exon
so has part: feature:260920-260988:-1:exon
so has part: feature:260698-260769:-1:exon
so has part: feature:260470-260591:-1:exon
so has part: feature:260151-260178:-1:exon

XP_015505665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:267939-268011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267008-267111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266348-266424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266001-266079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265818-265894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265554-265725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265421-265483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264961-265029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264693-264862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264530-264614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264314-264462:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264058-264235:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:263816-263908:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263541-263736:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263363-263471:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:263140-263290:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262994-263071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262800-262911:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:262568-262706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:261603-261656:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:261239-261347:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:260920-260988:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:260698-260769:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:260470-260591:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:260151-260178:-1:exon

ADAM15
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9157
gene: ADAM15
product: ADAM metallopeptidase domain 15, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_001524982.2
SIO_010081: ADAM15
so part of: ADAM15
location: complement(join(261256..261347,261454..261656,262568..262706,262800..262911,262994..263071,263140..263290,263363..263471,263541..263736,263816..263908,264058..264235,264314..264462,264530..264614,264693..264862,264961..265029,265421..265483,265554..265725,265818..265894,266001..266079,266348..266424,267008..267111,267939..268017))
location: region:261256-268017:-1
so has part: feature:267939-268017:-1:exon
so has part: feature:267008-267111:-1:exon
so has part: feature:266348-266424:-1:exon
so has part: feature:266001-266079:-1:exon
so has part: feature:265818-265894:-1:exon
so has part: feature:265554-265725:-1:exon
so has part: feature:265421-265483:-1:exon
so has part: feature:264961-265029:-1:exon
so has part: feature:264693-264862:-1:exon
so has part: feature:264530-264614:-1:exon
so has part: feature:264314-264462:-1:exon
so has part: feature:264058-264235:-1:exon
so has part: feature:263816-263908:-1:exon
so has part: feature:263541-263736:-1:exon
so has part: feature:263363-263471:-1:exon
so has part: feature:263140-263290:-1:exon
so has part: feature:262994-263071:-1:exon
so has part: feature:262800-262911:-1:exon
so has part: feature:262568-262706:-1:exon
so has part: feature:261454-261656:-1:exon
so has part: feature:261256-261347:-1:exon

position:261256:-1
position: 261256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267939-268017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:267008-267111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:266348-266424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:266001-266079:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:265818-265894:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:265554-265725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265421-265483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264961-265029:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264693-264862:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264530-264614:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:264314-264462:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:264058-264235:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:263816-263908:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263541-263736:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:263363-263471:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:263140-263290:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:262994-263071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:262800-262911:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:262568-262706:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:261454-261656:-1:exon

position:261454:-1
position: 261454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:261256-261347:-1:exon

DCST2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: DCST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 269696..273051
location: region:269696-273051:1
so has part: feature:269696-273051:1:exon
subclass of: SO_0000010

107214526
type: Gene
SIO_000068: ncbigene

position:269696:1
position: 269696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273051:1
position: 273051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269696-273051:1:exon

DCST2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DCST2
product: DC-STAMP domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033519732.1
SIO_010081: DCST2
subclass of: SO_0000673
so part of: DCST2
location: join(269696..270015,270105..270275,270393..270494,270588..270772,271019..271260,271331..271488,271570..271734,271815..271982,272079..272179,272262..272392,272499..272614,272689..272782,272859..273051)
location: region:269696-273051:1
so has part: feature:269696-270015:1:exon
so has part: feature:270105-270275:1:exon
so has part: feature:270393-270494:1:exon
so has part: feature:270588-270772:1:exon
so has part: feature:271019-271260:1:exon
so has part: feature:271331-271488:1:exon
so has part: feature:271570-271734:1:exon
so has part: feature:271815-271982:1:exon
so has part: feature:272079-272179:1:exon
so has part: feature:272262-272392:1:exon
so has part: feature:272499-272614:1:exon
so has part: feature:272689-272782:1:exon
so has part: feature:272859-273051:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:269696-270015:1:exon

position:270015:1
position: 270015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:270105-270275:1:exon

position:270105:1
position: 270105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270275:1
position: 270275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:270393-270494:1:exon

position:270393:1
position: 270393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270494:1
position: 270494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:270588-270772:1:exon

position:270588:1
position: 270588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270772:1
position: 270772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:271019-271260:1:exon

position:271019:1
position: 271019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271260:1
position: 271260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:271331-271488:1:exon

position:271331:1
position: 271331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271488:1
position: 271488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:271570-271734:1:exon

position:271570:1
position: 271570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271734:1
position: 271734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:271815-271982:1:exon

position:271815:1
position: 271815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271982:1
position: 271982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:272079-272179:1:exon

position:272079:1
position: 272079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272179:1
position: 272179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:272262-272392:1:exon

position:272262:1
position: 272262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272392:1
position: 272392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:272499-272614:1:exon

position:272499:1
position: 272499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272614:1
position: 272614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:272689-272782:1:exon

position:272689:1
position: 272689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272782:1
position: 272782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:272859-273051:1:exon

position:272859:1
position: 272859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCST2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DCST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DC-STAMP domain-containing protein 2
translation: MRLVSRLGRALRAWRGRCKKRALSPRTKRRPEDPNKAQEFARSLGGLTLGLALASIYGALVLLVQGHNVWYCLSITITLGAGLGLGMAFSTKTRRIVLLALPHFFTKEGKMMIMMLVLCLTMQGPGTNLLHNISQVAKALSCGAELAQNQTAERLQRAKEPLLNVQKKIKELGQNAKVVGDRVRKFVRSIIDSTRHVARALRNVWLWLARAGNICNRELGSPQSSCFRYMDKAKDRCERALPFFFHICYVVHSFKVLCHCTAPLVTSAALTDALNRVRAEFEFNISVVHHFSVNLNASKSLGEVSADMMEAVQQHMEPYYHVLELFSYISILAILYLCYQAMRYQRRYLRDDTFDNVYITRRFVELDLRCAEEGRPTVLPLSARERGRYIPPGALWLSKRERRQYGLQLFGFLRHVLLGFSIILADYSIFWLLDLFRHQLSAEIIARAPSTMNISVNGTGYTSEIFQDLVSAFNTLQEGKVSVLSQVCLIEPVEPEHSTYITIGILYGVWLFICIFGSYMARLRRAVCAAYFPSREQERVAFLHNIIRARREWLIFARSQVGTQNLADTGKSRFFLILISRFPLLVRLARCLGIQHKHCLVCGTAEQPGLSACITPGCKGLYCSECYRALNNTCSVCMAPLSYPDSGDEELDSSDEETPELWLGAVWVLRGQERGRQLLQRIKDMIKGQRLPSRTATLLQDQLEEEENEGMLSR
SIO_010081: DCST2
subclass of: SO_0000673
so part of: DCST2
location: join(269697..270015,270105..270275,270393..270494,270588..270772,271019..271260,271331..271488,271570..271734,271815..271982,272079..272179,272262..272392,272499..272614,272689..272782,272859..273051)
location: region:269697-273051:1
so has part: feature:269697-270015:1:exon
so has part: feature:270105-270275:1:exon
so has part: feature:270393-270494:1:exon
so has part: feature:270588-270772:1:exon
so has part: feature:271019-271260:1:exon
so has part: feature:271331-271488:1:exon
so has part: feature:271570-271734:1:exon
so has part: feature:271815-271982:1:exon
so has part: feature:272079-272179:1:exon
so has part: feature:272262-272392:1:exon
so has part: feature:272499-272614:1:exon
so has part: feature:272689-272782:1:exon
so has part: feature:272859-273051:1:exon

XP_033375623.1
type: Protein
SIO_000068: ncbiprotein

position:269697:1
position: 269697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:269697-270015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:270105-270275:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:270393-270494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:270588-270772:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:271019-271260:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271331-271488:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271570-271734:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:271815-271982:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:272079-272179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:272262-272392:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272499-272614:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272689-272782:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272859-273051:1:exon

DCST1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: DCST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 273101..276731
location: region:273101-276731:1
so has part: feature:273101-276731:1:exon
subclass of: SO_0000010

107214528
type: Gene
SIO_000068: ncbigene

position:273101:1
position: 273101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276731:1
position: 276731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273101-276731:1:exon

DCST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DCST1
product: DC-STAMP domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033519733.1
SIO_010081: DCST1
subclass of: SO_0000673
so part of: DCST1
location: join(273101..273296,273386..273511,273589..273663,273752..273880,273961..274100,274185..274362,274487..274630,274728..274849,274926..275080,275255..275354,275435..275530,275606..275732,275848..275964,276055..276197,276293..276731)
location: region:273101-276731:1
so has part: feature:273101-273296:1:exon
so has part: feature:273386-273511:1:exon
so has part: feature:273589-273663:1:exon
so has part: feature:273752-273880:1:exon
so has part: feature:273961-274100:1:exon
so has part: feature:274185-274362:1:exon
so has part: feature:274487-274630:1:exon
so has part: feature:274728-274849:1:exon
so has part: feature:274926-275080:1:exon
so has part: feature:275255-275354:1:exon
so has part: feature:275435-275530:1:exon
so has part: feature:275606-275732:1:exon
so has part: feature:275848-275964:1:exon
so has part: feature:276055-276197:1:exon
so has part: feature:276293-276731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273101-273296:1:exon

position:273296:1
position: 273296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273386-273511:1:exon

position:273386:1
position: 273386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273511:1
position: 273511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273589-273663:1:exon

position:273589:1
position: 273589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273663:1
position: 273663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:273752-273880:1:exon

position:273752:1
position: 273752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273880:1
position: 273880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:273961-274100:1:exon

position:273961:1
position: 273961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274100:1
position: 274100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:274185-274362:1:exon

position:274185:1
position: 274185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274362:1
position: 274362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:274487-274630:1:exon

position:274487:1
position: 274487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274630:1
position: 274630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:274728-274849:1:exon

position:274728:1
position: 274728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274849:1
position: 274849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:274926-275080:1:exon

position:274926:1
position: 274926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275080:1
position: 275080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:275255-275354:1:exon

position:275255:1
position: 275255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275354:1
position: 275354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:275435-275530:1:exon

position:275435:1
position: 275435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275530:1
position: 275530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:275606-275732:1:exon

position:275606:1
position: 275606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275732:1
position: 275732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:275848-275964:1:exon

position:275848:1
position: 275848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275964:1
position: 275964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:276055-276197:1:exon

position:276055:1
position: 276055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276197:1
position: 276197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:276293-276731:1:exon

position:276293:1
position: 276293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DCST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase DCST1
translation: MLVPNTCLPTARHSSDHKEQAERRDRELQEVVVLQTPSHVPSSLEHPTGISSGVESRRPEKPPNTILKRVVVSVLPGPCSRFLWSRPDEYRGRKALLGAGFGMLLGLGLCHLLIMPLDLPETQRVKLTWGLTVVTALGWATSPQFRCANMLMVPKFLGKEGRLYVVSFVFAAIYNGPGANLWYNLMETKRSMDCVVELQVNHTQHLWQASTTPLRQVMEELVRSAETLNTEMQNISRAFVELNEQVASEEGYDLRQRPDTGTQPAPSTQELYETKTKLRCEAVIERGLQRCTGHFQNMYKKCKEKVTVPLISHLICLPMQFGFLCHSVKLMSHWCENRIPVDGNFGKMYDQVNSSVNSLRQEFSASISYQEEHHKMLVGTEIAEQLRQEVTSQLQREGARLGLAVSFFRLLLSFTFLFVFFSAFLYTHQYLHNLGFDNCYITTYFRQIDARRREQNKQTLLPLLREEISSFIFPCKPALQRPELQHMVLELLRYIPLLLFLLFVCGLDHFIFSILSIIQHHSFIEYSYQTSHHLSVNVMGTSLMAELLRGTIGALNASFDTEVETSNLACLPQPTGMTRQQYLNTCLPLGALALLCLAQVYPFRLRRAIAAFYFPKREKARVLFLYNRLLRQRQNFLLLQRGRIARQPPTLVSGDTDTGCRVGVPTAPGPHSPSGRAPQRPVLASGDVAVVSPALALPAPLPAPELHLVRDPRDPPAPALPQSRLRRLVLRVVLEAGGAHLPRLQPCGPRPRPGEQRG
SIO_010081: DCST1
subclass of: SO_0000673
so part of: DCST1
location: join(273101..273296,273386..273511,273589..273663,273752..273880,273961..274100,274185..274362,274487..274630,274728..274849,274926..275080,275255..275354,275435..275530,275606..275732,275848..275964,276055..276197,276293..276721)
location: region:273101-276721:1
so has part: feature:273101-273296:1:exon
so has part: feature:273386-273511:1:exon
so has part: feature:273589-273663:1:exon
so has part: feature:273752-273880:1:exon
so has part: feature:273961-274100:1:exon
so has part: feature:274185-274362:1:exon
so has part: feature:274487-274630:1:exon
so has part: feature:274728-274849:1:exon
so has part: feature:274926-275080:1:exon
so has part: feature:275255-275354:1:exon
so has part: feature:275435-275530:1:exon
so has part: feature:275606-275732:1:exon
so has part: feature:275848-275964:1:exon
so has part: feature:276055-276197:1:exon
so has part: feature:276293-276721:1:exon

XP_033375624.1
type: Protein
SIO_000068: ncbiprotein

position:276721:1
position: 276721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273101-273296:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273386-273511:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273589-273663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273752-273880:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:273961-274100:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274185-274362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:274487-274630:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274728-274849:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:274926-275080:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:275255-275354:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:275435-275530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:275606-275732:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:275848-275964:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:276055-276197:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:276293-276721:1:exon

PEAR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PEAR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(278466..287524)
location: region:278466-287524:-1
so has part: feature:278466-287524:-1:exon
subclass of: SO_0000010

107214506
type: Gene
SIO_000068: ncbigene

position:278466:-1
position: 278466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287524:-1
position: 287524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:278466-287524:-1:exon

PEAR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PEAR1
product: platelet endothelial aggregation receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015649993.3
SIO_010081: PEAR1
subclass of: SO_0000673
so part of: PEAR1
location: complement(join(278466..278739,279106..279291,279655..279714,279889..280000,280091..280200,280278..280493,280570..280698,280898..281026,281104..281250,281321..281423,281514..281677,281750..281870,282337..282511,283070..283282,283707..283843,283919..284033,284116..284362,284799..284891,284993..285093,285490..285594,285685..285777,287420..287524))
location: region:278466-287524:-1
so has part: feature:287420-287524:-1:exon
so has part: feature:285685-285777:-1:exon
so has part: feature:285490-285594:-1:exon
so has part: feature:284993-285093:-1:exon
so has part: feature:284799-284891:-1:exon
so has part: feature:284116-284362:-1:exon
so has part: feature:283919-284033:-1:exon
so has part: feature:283707-283843:-1:exon
so has part: feature:283070-283282:-1:exon
so has part: feature:282337-282511:-1:exon
so has part: feature:281750-281870:-1:exon
so has part: feature:281514-281677:-1:exon
so has part: feature:281321-281423:-1:exon
so has part: feature:281104-281250:-1:exon
so has part: feature:280898-281026:-1:exon
so has part: feature:280570-280698:-1:exon
so has part: feature:280278-280493:-1:exon
so has part: feature:280091-280200:-1:exon
so has part: feature:279889-280000:-1:exon
so has part: feature:279655-279714:-1:exon
so has part: feature:279106-279291:-1:exon
so has part: feature:278466-278739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287420-287524:-1:exon

position:287420:-1
position: 287420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:285685-285777:-1:exon

position:285685:-1
position: 285685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285777:-1
position: 285777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:285490-285594:-1:exon

position:285490:-1
position: 285490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285594:-1
position: 285594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:284993-285093:-1:exon

position:284993:-1
position: 284993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285093:-1
position: 285093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:284799-284891:-1:exon

position:284799:-1
position: 284799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284891:-1
position: 284891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:284116-284362:-1:exon

position:284116:-1
position: 284116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284362:-1
position: 284362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:283919-284033:-1:exon

position:283919:-1
position: 283919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284033:-1
position: 284033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:283707-283843:-1:exon

position:283707:-1
position: 283707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283843:-1
position: 283843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:283070-283282:-1:exon

position:283070:-1
position: 283070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283282:-1
position: 283282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:282337-282511:-1:exon

position:282337:-1
position: 282337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282511:-1
position: 282511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:281750-281870:-1:exon

position:281750:-1
position: 281750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281870:-1
position: 281870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:281514-281677:-1:exon

position:281514:-1
position: 281514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281677:-1
position: 281677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:281321-281423:-1:exon

position:281321:-1
position: 281321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281423:-1
position: 281423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:281104-281250:-1:exon

position:281104:-1
position: 281104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281250:-1
position: 281250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:280898-281026:-1:exon

position:280898:-1
position: 280898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281026:-1
position: 281026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:280570-280698:-1:exon

position:280570:-1
position: 280570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280698:-1
position: 280698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:280278-280493:-1:exon

position:280278:-1
position: 280278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280493:-1
position: 280493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:280091-280200:-1:exon

position:280091:-1
position: 280091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280200:-1
position: 280200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:279889-280000:-1:exon

position:279889:-1
position: 279889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280000:-1
position: 280000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:279655-279714:-1:exon

position:279655:-1
position: 279655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279714:-1
position: 279714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:279106-279291:-1:exon

position:279106:-1
position: 279106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279291:-1
position: 279291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:278466-278739:-1:exon

position:278739:-1
position: 278739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PEAR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PEAR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet endothelial aggregation receptor 1
translation: MLLRAAVLAVHAGLLAALRPGDPNVCSYWESFTAPVKESYTKAHVVSSSEPCPGGLGLPLPCPQQRVVYRTEYRQTIRTDYRRRYQCCQGYYESRDSCVPHCSQECVHGRCVAPELCQCEPGWRGPSCSSECDEQSWGPDCAQRCPCHHGAPCDPLTGVCSCPPGFIDPLCRQPCPPGTYGQDCHLSCPCHQQAPCNASTGACLCPPGLSGPLCKVPCPEGMSCTTPCPCQNGGICHPSSTSTCVCPHGWMGEICSVPCPPGRFGPGCQGECRCHNGGHCDPQGGQCQCAPGFTGEQCQERCPVGRYGQDCQESCDCANGGQCFHVDGGCLCEAGFQGSRCEERHCLPGLYGLHCESRCLCHPQHSQSCHPMLGECVCLPGWAGLYCNESCSPGYFGPGCLQSCLCLHGGVCDGTTGHCHCPPGYTDEHCSSLCPSNTFGMNCSGLCSCQHALACSPLDGSCFCKEGWHGPDCSMPCPAGTWGLSCNRSCDCAHGASCDPQSGTCRCPPGWQGPRCLQPCPNGTFGAGCGERCACAHADGCDPVTGECHCLPGWTGPQCKQGCPHGSWGRGCHKSCSCRNGGSCSPQDGSCTCAPGYRGPTCQRTCPAGRYGKRCSLSCSCANGSSCHPTNGSCLCAPGWRGPRCSQPCTPGTFGLQCDQLCRCPRNATCDPTNGTCPCAPGTTGPHCEAGNPDLPYTIEPAPPAAYSPLGMVLSLVALVLLLVVVVVTTLCYHRWQKGKERRHLAVAYRAGQTDTSDYMVPDVPPSHHAHYYSNPSYHTLSQCPLPSRGPQDRASSLKMSGTQLFPSMERPYSPEGNATLPPDWKHLGASALGPRGRQLDRSYTYSHGLRKCDSKEHPWEGLGASTSSLASENPYATIKELPPATTKAHEGSYMEMKSPVQREMSYAEIGLLEEPQEEGCPEGPEGPPSRDPPSHYDSPKNSHIPSHYDVPPARHYPPSPPLRRKDLR
SIO_010081: PEAR1
subclass of: SO_0000673
so part of: PEAR1
location: complement(join(278585..278739,279106..279291,279655..279714,279889..280000,280091..280200,280278..280493,280570..280698,280898..281026,281104..281250,281321..281423,281514..281677,281750..281870,282337..282511,283070..283282,283707..283843,283919..284033,284116..284362,284799..284891,284993..285093,285490..285594,285685..285776))
location: region:278585-285776:-1
so has part: feature:285685-285776:-1:exon
so has part: feature:285490-285594:-1:exon
so has part: feature:284993-285093:-1:exon
so has part: feature:284799-284891:-1:exon
so has part: feature:284116-284362:-1:exon
so has part: feature:283919-284033:-1:exon
so has part: feature:283707-283843:-1:exon
so has part: feature:283070-283282:-1:exon
so has part: feature:282337-282511:-1:exon
so has part: feature:281750-281870:-1:exon
so has part: feature:281514-281677:-1:exon
so has part: feature:281321-281423:-1:exon
so has part: feature:281104-281250:-1:exon
so has part: feature:280898-281026:-1:exon
so has part: feature:280570-280698:-1:exon
so has part: feature:280278-280493:-1:exon
so has part: feature:280091-280200:-1:exon
so has part: feature:279889-280000:-1:exon
so has part: feature:279655-279714:-1:exon
so has part: feature:279106-279291:-1:exon
so has part: feature:278585-278739:-1:exon

XP_015505479.1
type: Protein
SIO_000068: ncbiprotein

position:278585:-1
position: 278585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285776:-1
position: 285776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285685-285776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:285490-285594:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284993-285093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284799-284891:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284116-284362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:283919-284033:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:283707-283843:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283070-283282:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:282337-282511:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:281750-281870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:281514-281677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:281321-281423:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:281104-281250:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:280898-281026:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:280570-280698:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:280278-280493:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:280091-280200:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:279889-280000:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:279655-279714:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:279106-279291:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:278585-278739:-1:exon

NTRK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: NTRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(290645..299433)
location: region:290645-299433:-1
so has part: feature:290645-299433:-1:exon
subclass of: SO_0000010

107214529
type: Gene
SIO_000068: ncbigene

position:290645:-1
position: 290645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299433:-1
position: 299433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290645-299433:-1:exon

NTRK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NTRK1
product: neurotrophic receptor tyrosine kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015650013.3
SIO_010081: NTRK1
subclass of: SO_0000673
so part of: NTRK1
location: complement(join(290645..291202,291289..291447,291829..292069,293738..293910,293979..294109,294201..294347,294710..294812,295045..295103,295244..295261,295467..295796,295869..295995,296152..296300,296411..296565,296832..296900,297296..297367,297534..297608,299182..299433))
location: region:290645-299433:-1
so has part: feature:299182-299433:-1:exon
so has part: feature:297534-297608:-1:exon
so has part: feature:297296-297367:-1:exon
so has part: feature:296832-296900:-1:exon
so has part: feature:296411-296565:-1:exon
so has part: feature:296152-296300:-1:exon
so has part: feature:295869-295995:-1:exon
so has part: feature:295467-295796:-1:exon
so has part: feature:295244-295261:-1:exon
so has part: feature:295045-295103:-1:exon
so has part: feature:294710-294812:-1:exon
so has part: feature:294201-294347:-1:exon
so has part: feature:293979-294109:-1:exon
so has part: feature:293738-293910:-1:exon
so has part: feature:291829-292069:-1:exon
so has part: feature:291289-291447:-1:exon
so has part: feature:290645-291202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299182-299433:-1:exon

position:299182:-1
position: 299182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297534-297608:-1:exon

position:297534:-1
position: 297534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297608:-1
position: 297608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297296-297367:-1:exon

position:297296:-1
position: 297296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297367:-1
position: 297367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:296832-296900:-1:exon

position:296832:-1
position: 296832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296900:-1
position: 296900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296411-296565:-1:exon

position:296411:-1
position: 296411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296565:-1
position: 296565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:296152-296300:-1:exon

position:296152:-1
position: 296152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296300:-1
position: 296300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:295869-295995:-1:exon

position:295869:-1
position: 295869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295995:-1
position: 295995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:295467-295796:-1:exon

position:295467:-1
position: 295467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295796:-1
position: 295796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:295244-295261:-1:exon

position:295244:-1
position: 295244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295261:-1
position: 295261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:295045-295103:-1:exon

position:295045:-1
position: 295045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295103:-1
position: 295103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:294710-294812:-1:exon

position:294710:-1
position: 294710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294812:-1
position: 294812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:294201-294347:-1:exon

position:294201:-1
position: 294201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294347:-1
position: 294347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:293979-294109:-1:exon

position:293979:-1
position: 293979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294109:-1
position: 294109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:293738-293910:-1:exon

position:293738:-1
position: 293738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293910:-1
position: 293910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:291829-292069:-1:exon

position:291829:-1
position: 291829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292069:-1
position: 292069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:291289-291447:-1:exon

position:291289:-1
position: 291289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291447:-1
position: 291447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:290645-291202:-1:exon

position:291202:-1
position: 291202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NTRK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NTRK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity nerve growth factor receptor
translation: MPPPPAWLCLAAMLLPLPLSLPAPGAAGPCPWACRCPRAGILLCREPDTVGSLAPLLGTGSFTDVIIENQQALTTLTRADTRMLRDLRNLTISRSGLQHISADAFLDTPRLSHVNLSSNALQSLSWKTFQHLPLQELILVGNPFNCSCGLRWLQLWQSSSRAELGNQSLGCWEGSVLVPLGSQVLHACDPPTVHIEPPEVVLRQGDSVNLTCHVSADPPATTEWLVPEVGPELLVVTKLSDWEIVLEISNVSSDLNNKDLTCRAENAAGPAEDSVMLNVTFPPEILLLDKAIPRHSWCIPFSVKGNPVPSIHWLFNGTTLVEGLYIHTLIMEYEHNSSVLHGCLQLNRPTHVNNGNYTLLVRNALGSAASSVQGRFMDNPFSFSPEEPIPVSLSPLGTRNSSLEGPVETTDEHTFGVSVAVALAVFACLSLSVMLILLNKCGRRSKFGINRSAVLAQEDDLAMSLHFMNLGSSPLSSAESKLEGLKSNFIENPQYFCNACVHHVQRRDIVLKWELGEGAFGKVFLAECYNLLPEQEKMLVAVKALKEVTESARLDFQREAELLTVLQHEHIVKFYGVCTEGEPLIMVFEYMKHGDLNRFLRSHGPDAKILEQGPGQPRGPLALGHMLHIATQIASGMVYLASLHFVHRDLATRNCLVGHDLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERPRTCPSEVYSIMQSCWHREPQQRQPIKEIHSRLQALVKTPPVYLDILG
SIO_010081: NTRK1
subclass of: SO_0000673
so part of: NTRK1
location: complement(join(291017..291202,291289..291447,291829..292069,293738..293910,293979..294109,294201..294347,294710..294812,295045..295103,295244..295261,295467..295796,295869..295995,296152..296300,296411..296565,296832..296900,297296..297367,297534..297608,299182..299375))
location: region:291017-299375:-1
so has part: feature:299182-299375:-1:exon
so has part: feature:297534-297608:-1:exon
so has part: feature:297296-297367:-1:exon
so has part: feature:296832-296900:-1:exon
so has part: feature:296411-296565:-1:exon
so has part: feature:296152-296300:-1:exon
so has part: feature:295869-295995:-1:exon
so has part: feature:295467-295796:-1:exon
so has part: feature:295244-295261:-1:exon
so has part: feature:295045-295103:-1:exon
so has part: feature:294710-294812:-1:exon
so has part: feature:294201-294347:-1:exon
so has part: feature:293979-294109:-1:exon
so has part: feature:293738-293910:-1:exon
so has part: feature:291829-292069:-1:exon
so has part: feature:291289-291447:-1:exon
so has part: feature:291017-291202:-1:exon

XP_015505499.1
type: Protein
SIO_000068: ncbiprotein

position:291017:-1
position: 291017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299375:-1
position: 299375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299182-299375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297534-297608:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297296-297367:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296832-296900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296411-296565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:296152-296300:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:295869-295995:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295467-295796:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:295244-295261:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:295045-295103:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:294710-294812:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:294201-294347:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:293979-294109:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:293738-293910:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:291829-292069:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:291289-291447:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:291017-291202:-1:exon

INSRR
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: INSRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(300478..311378)
location: region:300478-311378:-1
so has part: feature:300478-311378:-1:exon
subclass of: SO_0000010

107214586
type: Gene
SIO_000068: ncbigene

position:300478:-1
position: 300478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311378:-1
position: 311378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:300478-311378:-1:exon

INSRR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: INSRR
product: insulin receptor related receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_015650151.2
SIO_010081: INSRR
subclass of: SO_0000673
so part of: INSRR
location: complement(join(300478..301271,301400..301534,301603..301732,301807..301966,302068..302178,302257..302486,303009..303079,303184..303292,303816..303981,304353..304489,304632..304897,305006..305047,305171..305360,305467..305634,305715..305953,306081..306207,306277..306491,306576..306720,306866..307008,307095..307407,308924..309475,311073..311378))
location: region:300478-311378:-1
so has part: feature:311073-311378:-1:exon
so has part: feature:308924-309475:-1:exon
so has part: feature:307095-307407:-1:exon
so has part: feature:306866-307008:-1:exon
so has part: feature:306576-306720:-1:exon
so has part: feature:306277-306491:-1:exon
so has part: feature:306081-306207:-1:exon
so has part: feature:305715-305953:-1:exon
so has part: feature:305467-305634:-1:exon
so has part: feature:305171-305360:-1:exon
so has part: feature:305006-305047:-1:exon
so has part: feature:304632-304897:-1:exon
so has part: feature:304353-304489:-1:exon
so has part: feature:303816-303981:-1:exon
so has part: feature:303184-303292:-1:exon
so has part: feature:303009-303079:-1:exon
so has part: feature:302257-302486:-1:exon
so has part: feature:302068-302178:-1:exon
so has part: feature:301807-301966:-1:exon
so has part: feature:301603-301732:-1:exon
so has part: feature:301400-301534:-1:exon
so has part: feature:300478-301271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311073-311378:-1:exon

position:311073:-1
position: 311073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:308924-309475:-1:exon

position:308924:-1
position: 308924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309475:-1
position: 309475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:307095-307407:-1:exon

position:307095:-1
position: 307095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307407:-1
position: 307407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306866-307008:-1:exon

position:306866:-1
position: 306866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307008:-1
position: 307008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:306576-306720:-1:exon

position:306576:-1
position: 306576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306720:-1
position: 306720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:306277-306491:-1:exon

position:306277:-1
position: 306277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306491:-1
position: 306491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:306081-306207:-1:exon

position:306081:-1
position: 306081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306207:-1
position: 306207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:305715-305953:-1:exon

position:305715:-1
position: 305715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305953:-1
position: 305953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:305467-305634:-1:exon

position:305467:-1
position: 305467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305634:-1
position: 305634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:305171-305360:-1:exon

position:305171:-1
position: 305171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305360:-1
position: 305360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:305006-305047:-1:exon

position:305006:-1
position: 305006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305047:-1
position: 305047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:304632-304897:-1:exon

position:304632:-1
position: 304632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304897:-1
position: 304897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:304353-304489:-1:exon

position:304353:-1
position: 304353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304489:-1
position: 304489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:303816-303981:-1:exon

position:303816:-1
position: 303816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303981:-1
position: 303981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:303184-303292:-1:exon

position:303184:-1
position: 303184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303292:-1
position: 303292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:303009-303079:-1:exon

position:303009:-1
position: 303009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303079:-1
position: 303079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:302257-302486:-1:exon

position:302257:-1
position: 302257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302486:-1
position: 302486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:302068-302178:-1:exon

position:302068:-1
position: 302068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302178:-1
position: 302178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:301807-301966:-1:exon

position:301807:-1
position: 301807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301966:-1
position: 301966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:301603-301732:-1:exon

position:301603:-1
position: 301603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301732:-1
position: 301732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:301400-301534:-1:exon

position:301400:-1
position: 301400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301534:-1
position: 301534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:300478-301271:-1:exon

position:301271:-1
position: 301271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INSRR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: INSRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin receptor-related protein
translation: MGPRALGAPRLGVMLLVLGHLPLPPVWAPSEICGSMDIRNDVSQLRKLENCSIIEGNLQILLMFTTGTEDFRGLSFPRLLMITEYLLLFRVYGLESLRDLFPNLSVIRGTNLFFSYALVIFEMPHLRDVGLHSLGHILRGSVRIERNQELCHLSTIDWGLLLPDAGDGTYIVGNKLAEECADVCPGILDVEKPCVQTSVNGQLDYRCWTSSYCQKVCPCGAGSACTAAGECCHAECLGGCGHPHDRRACVACRHFHFNGHCLPSCPPRTYEYEGWRCVTAEYCASLRKVSDNPRDASKFVIHQRQCLSECPSGYTRNESSMFCHKCEGLCPKECKVGTKTIDSMRAAQELGGCTLIEGNLILNIRRGYNLASELQSSLGLIETITGFLKIKHSFALVSLSFFKNLKLIRGDSMVDGNYTLYVLDNQNLQQLWDWSHHILSIPVGKMYFAFNPKLCLAEIYRMEEVTGTKGRQNKAEINPRTNGDRASCKTQTLRFISNITESDRIFLKWERYRPPEYRDLLSFIVYYKESPFQNVSEYVGQDACGAQSWNVLDVDLPLSSEQEPGVTLLNLRPWTQYAIFVRAITLTTAEEGRNYGAQSEVVYIRTMPAAPTVPRDVISMSNSSSHIVVRWKPPTQRNGNIIYYLVLWQQLAEDMELYINDYCHKGLKLPTSSADTRFGFGDGPEGEQDAEERCCPCRPTDGQLRMDGEAESFQKKFENFLHNSITIPRPPWKVTSINKNPQRTPKQRRDVVAVTSPANASSVEPLAPSRPGGEPKPNFQIFEDKVVRDRAVLSRLRHFTEYRIDIHACNHAAHTVGCSAATFVFARTMPELQADNIPGNVTWEPAGKNSVLLRWEEPRNPNGLILKYEIKYSRESEEVTTVVCVSRHRYSKYGGVHLALLQPGNYSAKVRATSLAGNGSWTGLVKFYILGPAEEESSSFYVLLTVTPVVLMVLISCLAVFVFFYNKKRNNDGYPSGTLYASVNPEYFSASDMYMPDEWEVSREKITVIRELGQGSFGMVYEGVALGLVTEGEETKVALKTVNELATMRERIEFLNEASVMKAFKCHHVVRLLGVVSQGQPALVIMELMTRGDLKSYLRSLRPEAENNPGLPPPSLKDMIQMAGEIADGMAYLNANKFVHRDLAARNCMVSEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPEALKDGIFNTQSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMDNGILERPENCPDKLHELMCLCWQQNPRQRPSFVQLLERIKDHMAPAFRTLSFFYSPENGHHCSGEPPNTETEPSPEEDEPPASPLPTCMDQSPDQLPNGTASL
SIO_010081: INSRR
subclass of: SO_0000673
so part of: INSRR
location: complement(join(301001..301271,301400..301534,301603..301732,301807..301966,302068..302178,302257..302486,303009..303079,303184..303292,303816..303981,304353..304489,304632..304897,305006..305047,305171..305360,305467..305634,305715..305953,306081..306207,306277..306491,306576..306720,306866..307008,307095..307407,308924..309475,311073..311166))
location: region:301001-311166:-1
so has part: feature:311073-311166:-1:exon
so has part: feature:308924-309475:-1:exon
so has part: feature:307095-307407:-1:exon
so has part: feature:306866-307008:-1:exon
so has part: feature:306576-306720:-1:exon
so has part: feature:306277-306491:-1:exon
so has part: feature:306081-306207:-1:exon
so has part: feature:305715-305953:-1:exon
so has part: feature:305467-305634:-1:exon
so has part: feature:305171-305360:-1:exon
so has part: feature:305006-305047:-1:exon
so has part: feature:304632-304897:-1:exon
so has part: feature:304353-304489:-1:exon
so has part: feature:303816-303981:-1:exon
so has part: feature:303184-303292:-1:exon
so has part: feature:303009-303079:-1:exon
so has part: feature:302257-302486:-1:exon
so has part: feature:302068-302178:-1:exon
so has part: feature:301807-301966:-1:exon
so has part: feature:301603-301732:-1:exon
so has part: feature:301400-301534:-1:exon
so has part: feature:301001-301271:-1:exon

XP_015505637.1
type: Protein
SIO_000068: ncbiprotein

position:301001:-1
position: 301001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311166:-1
position: 311166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311073-311166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308924-309475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307095-307407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306866-307008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:306576-306720:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:306277-306491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:306081-306207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305715-305953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305467-305634:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305171-305360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305006-305047:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:304632-304897:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304353-304489:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303816-303981:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303184-303292:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:303009-303079:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302257-302486:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302068-302178:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:301807-301966:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:301603-301732:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:301400-301534:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:301001-301271:-1:exon

SH2D2A
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SH2D2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 313206..318291
location: region:313206-318291:1
so has part: feature:313206-318291:1:exon
subclass of: SO_0000010

107214587
type: Gene
SIO_000068: ncbigene

position:313206:1
position: 313206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318291:1
position: 318291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:313206-318291:1:exon

SH2D2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SH2D2A
product: SH2 domain containing 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033519746.1
SIO_010081: SH2D2A
subclass of: SO_0000673
so part of: SH2D2A
location: join(313206..313242,314441..314592,314734..314909,315023..315112,315201..315372,315592..315735,315870..316403,316837..318291)
location: region:313206-318291:1
so has part: feature:313206-313242:1:exon
so has part: feature:314441-314592:1:exon
so has part: feature:314734-314909:1:exon
so has part: feature:315023-315112:1:exon
so has part: feature:315201-315372:1:exon
so has part: feature:315592-315735:1:exon
so has part: feature:315870-316403:1:exon
so has part: feature:316837-318291:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:313206-313242:1:exon

position:313242:1
position: 313242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314441-314592:1:exon

position:314441:1
position: 314441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314592:1
position: 314592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:314734-314909:1:exon

position:314734:1
position: 314734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314909:1
position: 314909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:315023-315112:1:exon

position:315023:1
position: 315023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315112:1
position: 315112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:315201-315372:1:exon

position:315201:1
position: 315201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315372:1
position: 315372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:315592-315735:1:exon

position:315592:1
position: 315592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315735:1
position: 315735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:315870-316403:1:exon

position:315870:1
position: 315870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316403:1
position: 316403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:316837-318291:1:exon

position:316837:1
position: 316837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH2D2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SH2D2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 2A
translation: MDDDRPLFTTFKPSGEDNRARAEPAPNTPPMQLQGAEQSPRHHNRHGRVPPGFWAPPAAQSLPEGDPWPDRMALRAQTRLWFEQTQAQRLGPEGELPTWFHGFISRREAEELLQDQPLGCFLVRFSESTIGFVLSYRGRDRCRHFVLEQLPDGRYAILGERSAHPELAELLRHHATVPVSPYPEFLTVPLPCGRKDEPRGRTERPAGSDAAHSPLSQAPAKLPEYSPASLESLRAEGGSAREAPRAPPPLPPKSSSRGAARGPRSSSSSAAVPEAPYAQVRKEAPSPEPPEAKYQQLMRFHVYAEPREDISPSTPSTPTRCEPEGPVPEELIPEEPIPEEPIPFYAMARGWSPRASPRENIYSEVALARQDVPARLPMALQNTFSTLPPKPRPHRRLFRSVSSQDCKRRQLSVAPSTGTQVTLNPELELDDAVYSQSSHREQQTTATAENVYEQLPGDCP
SIO_010081: SH2D2A
subclass of: SO_0000673
so part of: SH2D2A
location: join(314449..314592,314734..314909,315023..315112,315201..315372,315592..315735,315870..316403,316837..316959)
location: region:314449-316959:1
so has part: feature:314449-314592:1:exon
so has part: feature:314734-314909:1:exon
so has part: feature:315023-315112:1:exon
so has part: feature:315201-315372:1:exon
so has part: feature:315592-315735:1:exon
so has part: feature:315870-316403:1:exon
so has part: feature:316837-316959:1:exon

XP_033375637.1
type: Protein
SIO_000068: ncbiprotein

position:314449:1
position: 314449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316959:1
position: 316959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314449-314592:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314734-314909:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315023-315112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315201-315372:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315592-315735:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315870-316403:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316837-316959:1:exon

PRCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PRCC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(317755..325442)
location: region:317755-325442:-1
so has part: feature:317755-325442:-1:exon
subclass of: SO_0000010

107214588
type: Gene
SIO_000068: ncbigene

position:317755:-1
position: 317755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325442:-1
position: 325442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317755-325442:-1:exon

PRCC
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9157
gene: PRCC
product: proline rich mitotic checkpoint control factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_001524977.3
SIO_010081: PRCC
so part of: PRCC
location: complement(join(317755..318162,318743..319239,319736..319801,320115..320258,321302..321397,322999..323577,323978..324025,324747..325442))
location: region:317755-325442:-1
so has part: feature:324747-325442:-1:exon
so has part: feature:323978-324025:-1:exon
so has part: feature:322999-323577:-1:exon
so has part: feature:321302-321397:-1:exon
so has part: feature:320115-320258:-1:exon
so has part: feature:319736-319801:-1:exon
so has part: feature:318743-319239:-1:exon
so has part: feature:317755-318162:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324747-325442:-1:exon

position:324747:-1
position: 324747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:323978-324025:-1:exon

position:323978:-1
position: 323978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324025:-1
position: 324025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:322999-323577:-1:exon

position:322999:-1
position: 322999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323577:-1
position: 323577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321302-321397:-1:exon

position:321302:-1
position: 321302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321397:-1
position: 321397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320115-320258:-1:exon

position:320115:-1
position: 320115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320258:-1
position: 320258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319736-319801:-1:exon

position:319736:-1
position: 319736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319801:-1
position: 319801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:318743-319239:-1:exon

position:318743:-1
position: 318743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319239:-1
position: 319239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:317755-318162:-1:exon

position:318162:-1
position: 318162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRCC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PRCC
product: proline rich mitotic checkpoint control factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_015650161.3
SIO_010081: PRCC
subclass of: SO_0000673
so part of: PRCC
location: complement(join(317755..319239,319736..319801,320115..320258,321302..321397,322999..323577,323978..324025,324747..325442))
location: region:317755-325442:-1
so has part: feature:324747-325442:-1:exon
so has part: feature:323978-324025:-1:exon
so has part: feature:322999-323577:-1:exon
so has part: feature:321302-321397:-1:exon
so has part: feature:320115-320258:-1:exon
so has part: feature:319736-319801:-1:exon
so has part: feature:317755-319239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324747-325442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323978-324025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322999-323577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321302-321397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320115-320258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319736-319801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:317755-319239:-1:exon

PRCC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PRCC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich protein PRCC
translation: MSLVAYASSEEDSDAEEPAGEEEEAADSPPAAAEQPSSRGLFAALPPPRAPAVPPSFLMGPPPTVSGFGSAPPGQAGPESPPEPAASGDGAAESPRPRGLLLPPPRNAATAASPLSPPPAASPGAGLGLPKPKKRTEPVRIAAPELHKGDSDSEEDEPAKKKNTHQGRSEGSGLSALLPQPKNMTVKETNRLLLPYAFSRKAGENASDSKPAKTPSSSSKAKPAPKPAVPTTPSPSAIKAAAKSAALQVTKQITQEEEDSDEEVQPENYFSLSDRSEPSAAGAEPYLYPGTGGSEDPPPGTEPEPQFQDAAANAPLEFKTAAGSSGVQHSWAPKPGEDYGSHSYGQFPPAYGEPGGYYQDYYSSGYYPEVEPAQAPPQETSTDSSFIDDEAFKRLQGKRNRGREEINFVDIKGDDQLSGAQQWLTKSLTEEKTMKSFSKKKGDQPTGQQRRKHQITYLIHQAKERELELKNTWSENKLSRRQTQAKYGF
SIO_010081: PRCC
subclass of: SO_0000673
so part of: PRCC
location: complement(join(319153..319239,319736..319801,320115..320258,321302..321397,322999..323577,323978..324025,324747..325196))
location: region:319153-325196:-1
so has part: feature:324747-325196:-1:exon
so has part: feature:323978-324025:-1:exon
so has part: feature:322999-323577:-1:exon
so has part: feature:321302-321397:-1:exon
so has part: feature:320115-320258:-1:exon
so has part: feature:319736-319801:-1:exon
so has part: feature:319153-319239:-1:exon

XP_015505647.1
type: Protein
SIO_000068: ncbiprotein

position:319153:-1
position: 319153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325196:-1
position: 325196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324747-325196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:323978-324025:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:322999-323577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321302-321397:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320115-320258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319736-319801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:319153-319239:-1:exon

HDGF
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: HDGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 328681..335001
location: region:328681-335001:1
so has part: feature:328681-335001:1:exon
subclass of: SO_0000010

107214601
type: Gene
SIO_000068: ncbigene

position:328681:1
position: 328681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335001:1
position: 335001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328681-335001:1:exon

HDGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: HDGF
product: heparin binding growth factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_015650177.1
SIO_010081: HDGF
subclass of: SO_0000673
so part of: HDGF
location: join(328681..328795,333771..333847,333933..334071,334162..334338,334406..334596,334704..335001)
location: region:328681-335001:1
so has part: feature:328681-328795:1:exon
so has part: feature:333771-333847:1:exon
so has part: feature:333933-334071:1:exon
so has part: feature:334162-334338:1:exon
so has part: feature:334406-334596:1:exon
so has part: feature:334704-335001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:328681-328795:1:exon

position:328795:1
position: 328795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333771-333847:1:exon

position:333771:1
position: 333771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333847:1
position: 333847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:333933-334071:1:exon

position:333933:1
position: 333933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334071:1
position: 334071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:334162-334338:1:exon

position:334162:1
position: 334162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334338:1
position: 334338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:334406-334596:1:exon

position:334406:1
position: 334406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334596:1
position: 334596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:334704-335001:1:exon

position:334704:1
position: 334704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: HDGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatoma-derived growth factor
translation: MSRSNRQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSSSNKYQVFFFGTHETAFLGPKDLFPYEECKEKFGKPNKRKGFSEGLWEIENNPTVKASGYQPTQKKSCPEAAEREPQGDGEKKGNAEGSSDEEGKLVIDEQSKEKNEKAGIKRKAEDALEDSPKRPKDAEGQEGDKKVDNEEAPKEEPKANPSEGEKNSDTADAPDTNEAKQEGKEEVRDHKESL
SIO_010081: HDGF
subclass of: SO_0000673
so part of: HDGF
location: join(328709..328795,333771..333847,333933..334071,334162..334338,334406..334596,334704..334710)
location: region:328709-334710:1
so has part: feature:328709-328795:1:exon
so has part: feature:333771-333847:1:exon
so has part: feature:333933-334071:1:exon
so has part: feature:334162-334338:1:exon
so has part: feature:334406-334596:1:exon
so has part: feature:334704-334710:1:exon

XP_015505663.1
type: Protein
SIO_000068: ncbiprotein

position:328709:1
position: 328709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334710:1
position: 334710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:328709-328795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:333771-333847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333933-334071:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:334162-334338:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:334406-334596:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:334704-334710:1:exon

MRPL24
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MRPL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 336051..337854
location: region:336051-337854:1
so has part: feature:336051-337854:1:exon
subclass of: SO_0000010

107214515
type: Gene
SIO_000068: ncbigene

position:336051:1
position: 336051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337854:1
position: 337854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336051-337854:1:exon

MRPL24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MRPL24
product: mitochondrial ribosomal protein L24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_015650003.3
SIO_010081: MRPL24
subclass of: SO_0000673
so part of: MRPL24
location: join(336051..336135,336809..336992,337073..337168,337260..337363,337448..337578,337658..337854)
location: region:336051-337854:1
so has part: feature:336051-336135:1:exon
so has part: feature:336809-336992:1:exon
so has part: feature:337073-337168:1:exon
so has part: feature:337260-337363:1:exon
so has part: feature:337448-337578:1:exon
so has part: feature:337658-337854:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336051-336135:1:exon

position:336135:1
position: 336135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336809-336992:1:exon

position:336809:1
position: 336809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336992:1
position: 336992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337073-337168:1:exon

position:337073:1
position: 337073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337168:1
position: 337168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:337260-337363:1:exon

position:337260:1
position: 337260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337363:1
position: 337363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:337448-337578:1:exon

position:337448:1
position: 337448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337578:1
position: 337578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:337658-337854:1:exon

position:337658:1
position: 337658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MRPL24
product: mitochondrial ribosomal protein L24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_015650002.3
SIO_010081: MRPL24
subclass of: SO_0000673
so part of: MRPL24
location: join(336726..336992,337073..337168,337260..337363,337448..337578,337658..337854)
location: region:336726-337854:1
so has part: feature:336726-336992:1:exon
so has part: feature:337073-337168:1:exon
so has part: feature:337260-337363:1:exon
so has part: feature:337448-337578:1:exon
so has part: feature:337658-337854:1:exon

position:336726:1
position: 336726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336726-336992:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337073-337168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337260-337363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337448-337578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337658-337854:1:exon

MRPL24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MRPL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L24, mitochondrial
translation: MRLSALLSAARPRLPPGYRHGLWPPDSTAARLRNPPGQRRRKVFVEPVAKDDWKVFKGDTVQVLAGKDAGKQGMVTQVVQARNWVVVEGLNTHYRYINRTAKYSGTYISSEAPLLLSQICLVDPEDRKPTEVEWRYTEEGERVRVSLRSGRILPVPPQPRQDGVIPEQWVDGPKDTSEEDALAKTYRPSLKTFEEEIMDAMGIVETRRAKKSYWY
SIO_010081: MRPL24
subclass of: SO_0000673
so part of: MRPL24
location: join(336813..336992,337073..337168,337260..337363,337448..337578,337658..337794)
location: region:336813-337794:1
so has part: feature:336813-336992:1:exon
so has part: feature:337073-337168:1:exon
so has part: feature:337260-337363:1:exon
so has part: feature:337448-337578:1:exon
so has part: feature:337658-337794:1:exon

XP_015505488.1
type: Protein
SIO_000068: ncbiprotein

position:336813:1
position: 336813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337794:1
position: 337794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336813-336992:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337073-337168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337260-337363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337448-337578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337658-337794:1:exon

MRPL24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MRPL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L24, mitochondrial
translation: MRLSALLSAARPRLPPGYRHGLWPPDSTAARLRNPPGQRRRKVFVEPVAKDDWKVFKGDTVQVLAGKDAGKQGMVTQVVQARNWVVVEGLNTHYRYINRTAKYSGTYISSEAPLLLSQICLVDPEDRKPTEVEWRYTEEGERVRVSLRSGRILPVPPQPRQDGVIPEQWVDGPKDTSEEDALAKTYRPSLKTFEEEIMDAMGIVETRRAKKSYWY
SIO_010081: MRPL24
subclass of: SO_0000673
so part of: MRPL24
location: join(336813..336992,337073..337168,337260..337363,337448..337578,337658..337794)
location: region:336813-337794:1
so has part: feature:336813-336992:1:exon
so has part: feature:337073-337168:1:exon
so has part: feature:337260-337363:1:exon
so has part: feature:337448-337578:1:exon
so has part: feature:337658-337794:1:exon

XP_015505489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336813-336992:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:337073-337168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337260-337363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337448-337578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:337658-337794:1:exon

RRNAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: RRNAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(337907..340391)
location: region:337907-340391:-1
so has part: feature:337907-340391:-1:exon
subclass of: SO_0000010

107214514
type: Gene
SIO_000068: ncbigene

position:337907:-1
position: 337907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340391:-1
position: 340391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337907-340391:-1:exon

RRNAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RRNAD1
product: ribosomal RNA adenine dimethylase domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015650001.2
SIO_010081: RRNAD1
subclass of: SO_0000673
so part of: RRNAD1
location: complement(join(337907..338143,338248..338435,338682..339373,339444..339506,339580..339867,339942..340057,340250..340391))
location: region:337907-340391:-1
so has part: feature:340250-340391:-1:exon
so has part: feature:339942-340057:-1:exon
so has part: feature:339580-339867:-1:exon
so has part: feature:339444-339506:-1:exon
so has part: feature:338682-339373:-1:exon
so has part: feature:338248-338435:-1:exon
so has part: feature:337907-338143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340250-340391:-1:exon

position:340250:-1
position: 340250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339942-340057:-1:exon

position:339942:-1
position: 339942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340057:-1
position: 340057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:339580-339867:-1:exon

position:339580:-1
position: 339580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339867:-1
position: 339867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:339444-339506:-1:exon

position:339444:-1
position: 339444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339506:-1
position: 339506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:338682-339373:-1:exon

position:338682:-1
position: 338682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339373:-1
position: 339373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:338248-338435:-1:exon

position:338248:-1
position: 338248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338435:-1
position: 338435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:337907-338143:-1:exon

position:338143:-1
position: 338143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RRNAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RRNAD1
product: ribosomal RNA adenine dimethylase domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015650000.2
SIO_010081: RRNAD1
subclass of: SO_0000673
so part of: RRNAD1
location: complement(join(337907..338143,338248..338435,338682..339373,339444..339506,339580..339867,339942..340060,340250..340391))
location: region:337907-340391:-1
so has part: feature:340250-340391:-1:exon
so has part: feature:339942-340060:-1:exon
so has part: feature:339580-339867:-1:exon
so has part: feature:339444-339506:-1:exon
so has part: feature:338682-339373:-1:exon
so has part: feature:338248-338435:-1:exon
so has part: feature:337907-338143:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340250-340391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339942-340060:-1:exon

position:340060:-1
position: 340060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:339580-339867:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339444-339506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338682-339373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338248-338435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337907-338143:-1:exon

RRNAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RRNAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RRNAD1 isoform X2
translation: MPGVPAGPMTSRLLGAAMALQSPPHEQHSREQRWAADIIRLLMLYRPLLDAFVIDFFTEGLWAQLPPAWQPALASASPAQLAGLLGGRGGPGAAWPLSLLAFAAAARALAFPRGCPAGSPRPPCQSSRLHPLLRRHVKPKKQHEIQRLGKLLQRLSRATGCERVVDIGAGQGHLSRFLAFGLGLSVTAVESDGRLVGLAERFDQELLRELGKARGHERLPPRPLTPRPPQHVAGRLDPTAPWGELLPPDPPGPSPAARNPLGGPGGSEDGGRVLVTGLHACGDLSPALLSHFARSPAVAAVALVGCCYMKLSTGPQPPGCPTGYPLSTSVAALPGHQLSYRAREAACHALEEFEGRLRGGSPQLRAHCYRAVLESLICAADPAKRHLGLQPGRKAHTLSFSQYAHLGLPLAGLDPVGVPLDSEAVGAMLEQQHKVVAFCTLGQLLAPAVETLILLDRLLYLREQGFHCALVPLFNPRFSPRNLVLVAARTPLATVLAGLDRDSEDSSEDTDEDEDLGEAESPRVGQSPHSPGHRAQ
SIO_010081: RRNAD1
subclass of: SO_0000673
so part of: RRNAD1
location: complement(join(337926..338143,338248..338435,338682..339373,339444..339506,339580..339867,339942..340057,340250..340295))
location: region:337926-340295:-1
so has part: feature:340250-340295:-1:exon
so has part: feature:339942-340057:-1:exon
so has part: feature:339580-339867:-1:exon
so has part: feature:339444-339506:-1:exon
so has part: feature:338682-339373:-1:exon
so has part: feature:338248-338435:-1:exon
so has part: feature:337926-338143:-1:exon

XP_015505487.1
type: Protein
SIO_000068: ncbiprotein

position:337926:-1
position: 337926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340295:-1
position: 340295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340250-340295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339942-340057:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:339580-339867:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339444-339506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338682-339373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338248-338435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337926-338143:-1:exon

RRNAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RRNAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RRNAD1 isoform X1
translation: MPGVPAGPMTSRLLGEAAMALQSPPHEQHSREQRWAADIIRLLMLYRPLLDAFVIDFFTEGLWAQLPPAWQPALASASPAQLAGLLGGRGGPGAAWPLSLLAFAAAARALAFPRGCPAGSPRPPCQSSRLHPLLRRHVKPKKQHEIQRLGKLLQRLSRATGCERVVDIGAGQGHLSRFLAFGLGLSVTAVESDGRLVGLAERFDQELLRELGKARGHERLPPRPLTPRPPQHVAGRLDPTAPWGELLPPDPPGPSPAARNPLGGPGGSEDGGRVLVTGLHACGDLSPALLSHFARSPAVAAVALVGCCYMKLSTGPQPPGCPTGYPLSTSVAALPGHQLSYRAREAACHALEEFEGRLRGGSPQLRAHCYRAVLESLICAADPAKRHLGLQPGRKAHTLSFSQYAHLGLPLAGLDPVGVPLDSEAVGAMLEQQHKVVAFCTLGQLLAPAVETLILLDRLLYLREQGFHCALVPLFNPRFSPRNLVLVAARTPLATVLAGLDRDSEDSSEDTDEDEDLGEAESPRVGQSPHSPGHRAQ
SIO_010081: RRNAD1
subclass of: SO_0000673
so part of: RRNAD1
location: complement(join(337926..338143,338248..338435,338682..339373,339444..339506,339580..339867,339942..340060,340250..340295))
location: region:337926-340295:-1
so has part: feature:340250-340295:-1:exon
so has part: feature:339942-340060:-1:exon
so has part: feature:339580-339867:-1:exon
so has part: feature:339444-339506:-1:exon
so has part: feature:338682-339373:-1:exon
so has part: feature:338248-338435:-1:exon
so has part: feature:337926-338143:-1:exon

XP_015505486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340250-340295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339942-340060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:339580-339867:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:339444-339506:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:338682-339373:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:338248-338435:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:337926-338143:-1:exon

ISG20L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ISG20L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 340512..343205
location: region:340512-343205:1
so has part: feature:340512-343205:1:exon
subclass of: SO_0000010

107214532
type: Gene
SIO_000068: ncbigene

position:340512:1
position: 340512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343205:1
position: 343205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340512-343205:1:exon

ISG20L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ISG20L2
product: interferon stimulated exonuclease gene 20 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_015650016.3
SIO_010081: ISG20L2
subclass of: SO_0000673
so part of: ISG20L2
location: join(340512..341320,341438..341638,342307..343205)
location: region:340512-343205:1
so has part: feature:340512-341320:1:exon
so has part: feature:341438-341638:1:exon
so has part: feature:342307-343205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340512-341320:1:exon

position:341320:1
position: 341320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341438-341638:1:exon

position:341438:1
position: 341438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341638:1
position: 341638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:342307-343205:1:exon

position:342307:1
position: 342307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ISG20L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ISG20L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interferon-stimulated 20 kDa exonuclease-like 2
translation: MDDLILNLDFSAPESRPKKKPGNQKHQSFVRRRRELERRGVLRQKQLPAAPGGPRRAPGRGSGRSGGGPGKPRSGRPRSCPKENGPAAAPRCTPDSQNGHTGTSRTKGKARGAARDSAKAVGAPPASQKGSAGTGAPASSKGKARGAARGTPTAGGAPPAPTKLVAIDCEMVGTGPGGRTSSLARCSIVTYEGDVVYDQYVRPEAPIVDYRTRWSGIRRQHMARAVPFRTAQQQVLRILAGKVVVGHAIHNDFKALQYSHPKALTRDTAQIPLLNRRAGFPENTAISLKRLTKALLNQDIQVGKSGHSSVEDARATMELYKVVEEEWEQHLRQNLKQK
SIO_010081: ISG20L2
subclass of: SO_0000673
so part of: ISG20L2
location: join(340619..341320,341438..341638,342307..342420)
location: region:340619-342420:1
so has part: feature:340619-341320:1:exon
so has part: feature:341438-341638:1:exon
so has part: feature:342307-342420:1:exon

XP_015505502.1
type: Protein
SIO_000068: ncbiprotein

position:340619:1
position: 340619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342420:1
position: 342420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340619-341320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341438-341638:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:342307-342420:1:exon

CRABP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CRABP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 346465..350321
location: region:346465-350321:1
so has part: feature:346465-350321:1:exon
subclass of: SO_0000010

107214539
type: Gene
SIO_000068: ncbigene

position:346465:1
position: 346465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350321:1
position: 350321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346465-350321:1:exon

CRABP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CRABP2
product: cellular retinoic acid binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015650027.2
SIO_010081: CRABP2
subclass of: SO_0000673
so part of: CRABP2
location: join(346465..346657,348564..348742,349512..349628,349751..350321)
location: region:346465-350321:1
so has part: feature:346465-346657:1:exon
so has part: feature:348564-348742:1:exon
so has part: feature:349512-349628:1:exon
so has part: feature:349751-350321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346465-346657:1:exon

position:346657:1
position: 346657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:348564-348742:1:exon

position:348564:1
position: 348564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348742:1
position: 348742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:349512-349628:1:exon

position:349512:1
position: 349512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349628:1
position: 349628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:349751-350321:1:exon

position:349751:1
position: 349751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRABP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CRABP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cellular retinoic acid-binding protein 2
translation: MPNFSGNWKMKSSENFEELLKALGVNMMLRKIAVAAAAKPAVEIRQDGESFYIRTSTPVRTTEIRFRVGEEFEEQTVDGRPCKSLARWESENKMVCEQRLLKGDGPKTGWSREMTNDGELILTMTADDVVCTRVYIRE
SIO_010081: CRABP2
subclass of: SO_0000673
so part of: CRABP2
location: join(346588..346657,348564..348742,349512..349628,349751..349801)
location: region:346588-349801:1
so has part: feature:346588-346657:1:exon
so has part: feature:348564-348742:1:exon
so has part: feature:349512-349628:1:exon
so has part: feature:349751-349801:1:exon

XP_015505513.1
type: Protein
SIO_000068: ncbiprotein

position:346588:1
position: 346588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349801:1
position: 349801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346588-346657:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:348564-348742:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349512-349628:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:349751-349801:1:exon

LOC107214510
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354032..358443)
location: region:354032-358443:-1
so has part: feature:354032-358443:-1:exon
subclass of: SO_0000010

107214510
type: Gene
SIO_000068: ncbigene

position:354032:-1
position: 354032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358443:-1
position: 358443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354032-358443:-1:exon

LOC107214510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214510
product: dnaJ homolog subfamily A member 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_033519756.1
SIO_010081: LOC107214510
subclass of: SO_0000673
so part of: LOC107214510
location: complement(join(354032..354883,354973..355073,355148..355378,355457..355684,355767..355871,356843..357258,358364..358443))
location: region:354032-358443:-1
so has part: feature:358364-358443:-1:exon
so has part: feature:356843-357258:-1:exon
so has part: feature:355767-355871:-1:exon
so has part: feature:355457-355684:-1:exon
so has part: feature:355148-355378:-1:exon
so has part: feature:354973-355073:-1:exon
so has part: feature:354032-354883:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358364-358443:-1:exon

position:358364:-1
position: 358364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:356843-357258:-1:exon

position:356843:-1
position: 356843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357258:-1
position: 357258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:355767-355871:-1:exon

position:355767:-1
position: 355767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355871:-1
position: 355871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:355457-355684:-1:exon

position:355457:-1
position: 355457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355684:-1
position: 355684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:355148-355378:-1:exon

position:355148:-1
position: 355148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355378:-1
position: 355378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:354973-355073:-1:exon

position:354973:-1
position: 354973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355073:-1
position: 355073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:354032-354883:-1:exon

position:354883:-1
position: 354883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107214510
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214510
product: dnaJ homolog subfamily A member 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_015649996.2
SIO_010081: LOC107214510
subclass of: SO_0000673
so part of: LOC107214510
location: complement(join(354032..354883,354973..355073,355148..355378,355457..355684,355767..355871,356843..357041,357109..357258,358364..358437))
location: region:354032-358437:-1
so has part: feature:358364-358437:-1:exon
so has part: feature:357109-357258:-1:exon
so has part: feature:356843-357041:-1:exon
so has part: feature:355767-355871:-1:exon
so has part: feature:355457-355684:-1:exon
so has part: feature:355148-355378:-1:exon
so has part: feature:354973-355073:-1:exon
so has part: feature:354032-354883:-1:exon

position:358437:-1
position: 358437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358364-358437:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:357109-357258:-1:exon

position:357109:-1
position: 357109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:356843-357041:-1:exon

position:357041:-1
position: 357041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:355767-355871:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355457-355684:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:355148-355378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354973-355073:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:354032-354883:-1:exon

LOC107214510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 1-like isoform X2
translation: MVKETGYYDLLGVRPGASLDEIKRAYRRLALRYHPDKNPSEGERFKQISQAYEVLSDAHKRALYDRGGERAMKEGGLGGRGGGSGFGSPMDIFDLFFGGGVRMRGRADRRGKTVVHQLSVSLEDLYNGSTRKLSLQKNIICRKCGGCGVREGAQRRCPKCHGSGMEVRIHQLGPSMIQQIQTVCSQCQGQGEWIRPRDCCLTCNGRKVVREKKILSVHLDKGMKDGQKITFHEEGDQVPGLEPGDIIIVLDQKEHPVFRRSGDDLIVRREISLADALCGCRQVIRTLDNRTLLVSSPPGDVIRPGDLKCIPNEGMPVYRSPFQKGKLILQFEVKFPEPGWLPTDRLRQLQAFFPPQEEVMATEDTEEVELSDYTAHGGPGRRPYAGEAYHEDDFEDGMRQHVQCQTS
SIO_010081: LOC107214510
subclass of: SO_0000673
so part of: LOC107214510
location: complement(join(354656..354883,354973..355073,355148..355378,355457..355684,355767..355871,356843..357041,357109..357240))
location: region:354656-357240:-1
so has part: feature:357109-357240:-1:exon
so has part: feature:356843-357041:-1:exon
so has part: feature:355767-355871:-1:exon
so has part: feature:355457-355684:-1:exon
so has part: feature:355148-355378:-1:exon
so has part: feature:354973-355073:-1:exon
so has part: feature:354656-354883:-1:exon

XP_015505482.1
type: Protein
SIO_000068: ncbiprotein

position:354656:-1
position: 354656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357240:-1
position: 357240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357109-357240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:356843-357041:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355767-355871:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355457-355684:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:355148-355378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:354973-355073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:354656-354883:-1:exon

LOC107214510
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily A member 1-like isoform X1
translation: MRSSGRTGAWHCATTPTRTPVRASGYVQPPGPPQLALSHLTHLSPPQFKQISQAYEVLSDAHKRALYDRGGERAMKEGGLGGRGGGSGFGSPMDIFDLFFGGGVRMRGRADRRGKTVVHQLSVSLEDLYNGSTRKLSLQKNIICRKCGGCGVREGAQRRCPKCHGSGMEVRIHQLGPSMIQQIQTVCSQCQGQGEWIRPRDCCLTCNGRKVVREKKILSVHLDKGMKDGQKITFHEEGDQVPGLEPGDIIIVLDQKEHPVFRRSGDDLIVRREISLADALCGCRQVIRTLDNRTLLVSSPPGDVIRPGDLKCIPNEGMPVYRSPFQKGKLILQFEVKFPEPGWLPTDRLRQLQAFFPPQEEVMATEDTEEVELSDYTAHGGPGRRPYAGEAYHEDDFEDGMRQHVQCQTS
SIO_010081: LOC107214510
subclass of: SO_0000673
so part of: LOC107214510
location: complement(join(354656..354883,354973..355073,355148..355378,355457..355684,355767..355871,356843..357182))
location: region:354656-357182:-1
so has part: feature:356843-357182:-1:exon
so has part: feature:355767-355871:-1:exon
so has part: feature:355457-355684:-1:exon
so has part: feature:355148-355378:-1:exon
so has part: feature:354973-355073:-1:exon
so has part: feature:354656-354883:-1:exon

XP_033375647.1
type: Protein
SIO_000068: ncbiprotein

position:357182:-1
position: 357182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356843-357182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:355767-355871:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:355457-355684:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:355148-355378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:354973-355073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:354656-354883:-1:exon

NES
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: NES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(363390..371268)
location: region:363390-371268:-1
so has part: feature:363390-371268:-1:exon
subclass of: SO_0000010

107214598
type: Gene
SIO_000068: ncbigene

position:363390:-1
position: 363390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371268:-1
position: 371268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363390-371268:-1:exon

NES
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NES
product: nestin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015650174.3
SIO_010081: NES
subclass of: SO_0000673
so part of: NES
location: complement(join(363390..367539,368094..368167,368624..368748,369595..371268))
location: region:363390-371268:-1
so has part: feature:369595-371268:-1:exon
so has part: feature:368624-368748:-1:exon
so has part: feature:368094-368167:-1:exon
so has part: feature:363390-367539:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:369595-371268:-1:exon

position:369595:-1
position: 369595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368624-368748:-1:exon

position:368624:-1
position: 368624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368748:-1
position: 368748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368094-368167:-1:exon

position:368094:-1
position: 368094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368167:-1
position: 368167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:363390-367539:-1:exon

position:367539:-1
position: 367539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NES
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NES
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nestin
translation: MLSTESFAGARALGEESLQMWDLNKRLEAYLARVKFLEEENEVLRAEIQSSKNSPAGDSWRVKYEEELRALRDALDLAFREKCTAELARDNLYEEVQQVKSRCQKEQAAREEAKKQLSLSRKELEEERRAQIWLKERAVQLEKEVETLLEVHEEEKAGLDQEIASFSQSLESFRCAPVAFQPVEVEDYSKRLSEIWKGAVETYKTEVYQLEDSLCQAKESLWKAVEDNQQSQLQLQHLEKDLAGLKARKEMLEESLAQQWQEQRGEAEKFQLAMEALEQEQQSLRVQIARVLEDRQQLMHLKMSLSLEVATYRTLLEAESSRLQMPAGEFRLANGVRDLKLEVSSSKLVPASPESRRLLPRDHCSSPSIFPRAEGRGQLAKPQSDTSTPRSRSLSSRELQKISSALHGTALPAGPGCPTPSPSLAGRAAPRLSPEPPSPPEQESSRGEGLTWPEGDRGVLSQGTEPPNGSVGLRYPAQLVSEALEDALKAMEGDAQPKEEPVLSSTWAPREACVPSPVFPTEAAGEAVSEGPGEQQEPSEGSEDGDSPEVEERVGEVVLQGLGVESSVLQDRAVSPPGTGSGSQEDLGAWEEEEEEEEEVPAVLSPKDTELETQEGHRGLPGQAVTSWEKPEQEEDRAETPSTEPSHPSEDEEERGPCSPCKENRDFQEEGGDVEEEEHTELEAAHAVLVENHLVLPTKGHLEEDVVDAEQERSEQQKMPMCETDLAAEEEREQELCPEQEPSSVHETIPAEEDSLGAEEDAVGGGEDTGRVEDSEGGKGEASREVLGGEDHGVGQDPEAGEEPTAGEDPESGEDHGAGEDSEVGEDPGAGEAVGGDTLEWESRAPEEAEDLQESGSVEEEEEQEELEPGEEPWGGENGGNGQEPCPEDWELTAEDPEGVLGPEEPTWADDTPSSAERLKSEGTDGTSPAELEEAQEDDEEEAESQEMSQQQALPEAEPAEELAGQEQQGTTAEPAPAPPGAPEQGHRQELAEAPEEPWEVQDEEADEGLSSELVALKEVPGASAGSGDWALEEVPGEPEATADTGRRVELEDTLPDSTALNLYDGEVLAVGAPSTNPPESQESTDTAPEGEGCLEGRDEPPTPTVPESPEEEEGAEVAAVAESAEEEEGYFMVSAPSQEVSGLEEAEISEDFEEIKVEATEGSQDDLEAPGEVSPVPEGKAQLEVLVAGADEDMEVPTEEPEMPKHEENTAELEESPAVPEADPSCSGAMESLAGGTSEPAQGATGTGAWEGPENSEDLAAESDEELHNTTGELERDASGAGQEEEGAGEDESSVALHDTVEATSPAGLQAQAVPDGAEQPLEEQPSTEEEALDSDSPSSPRNEQPLEDNPPQLGSALEQRGFPEVIPDIPDTAVLSAEVPVDIMKDSDILEIVEQALEFNQELMGVRAAEGGQQEGRRTELPRDAGEDSSPASSSEEELTVQEAPDAVPETEARLRAENGLHREASLEELAEFSEEGLNGIASTAAAQELPTTTAEPSAVMPPQVPAPGDGTLRGKQGGVHPSPVPPALGEDVLCLTPLQPPAES
SIO_010081: NES
subclass of: SO_0000673
so part of: NES
location: complement(join(363908..367539,368094..368167,368624..368748,369595..370407))
location: region:363908-370407:-1
so has part: feature:369595-370407:-1:exon
so has part: feature:368624-368748:-1:exon
so has part: feature:368094-368167:-1:exon
so has part: feature:363908-367539:-1:exon

XP_015505660.1
type: Protein
SIO_000068: ncbiprotein

position:363908:-1
position: 363908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370407:-1
position: 370407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369595-370407:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368624-368748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368094-368167:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:363908-367539:-1:exon

BCAN
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: BCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 374449..391210
location: region:374449-391210:1
so has part: feature:374449-391210:1:exon
subclass of: SO_0000010

107214505
type: Gene
SIO_000068: ncbigene

position:374449:1
position: 374449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391210:1
position: 391210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374449-391210:1:exon

BCAN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: BCAN
product: brevican, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015649990.3
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(374449..374668,379891..379986,380107..380499,380640..380814,380903..381030,382240..382533,383669..383932,384617..384736,384908..385312,387353..387460,387645..387803,389630..389712,390042..390186,390387..390569,390645..391210)
location: region:374449-391210:1
so has part: feature:374449-374668:1:exon
so has part: feature:379891-379986:1:exon
so has part: feature:380107-380499:1:exon
so has part: feature:380640-380814:1:exon
so has part: feature:380903-381030:1:exon
so has part: feature:382240-382533:1:exon
so has part: feature:383669-383932:1:exon
so has part: feature:384617-384736:1:exon
so has part: feature:384908-385312:1:exon
so has part: feature:387353-387460:1:exon
so has part: feature:387645-387803:1:exon
so has part: feature:389630-389712:1:exon
so has part: feature:390042-390186:1:exon
so has part: feature:390387-390569:1:exon
so has part: feature:390645-391210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374449-374668:1:exon

position:374668:1
position: 374668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:379891-379986:1:exon

position:379891:1
position: 379891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379986:1
position: 379986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:380107-380499:1:exon

position:380107:1
position: 380107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380499:1
position: 380499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:380640-380814:1:exon

position:380640:1
position: 380640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380814:1
position: 380814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:380903-381030:1:exon

position:380903:1
position: 380903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381030:1
position: 381030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:382240-382533:1:exon

position:382240:1
position: 382240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382533:1
position: 382533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:383669-383932:1:exon

position:383669:1
position: 383669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383932:1
position: 383932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:384617-384736:1:exon

position:384617:1
position: 384617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384736:1
position: 384736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:384908-385312:1:exon

position:384908:1
position: 384908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385312:1
position: 385312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:387353-387460:1:exon

position:387353:1
position: 387353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387460:1
position: 387460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:387645-387803:1:exon

position:387645:1
position: 387645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387803:1
position: 387803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:389630-389712:1:exon

position:389630:1
position: 389630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389712:1
position: 389712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:390042-390186:1:exon

position:390042:1
position: 390042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390186:1
position: 390186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:390387-390569:1:exon

position:390387:1
position: 390387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390569:1
position: 390569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:390645-391210:1:exon

position:390645:1
position: 390645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BCAN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: BCAN
product: brevican, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015649991.3
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(374449..374668,379891..379986,380107..380499,380640..380814,380903..381030,382240..382533,384617..384736,384908..385312,387353..387460,387645..387803,389630..389712,390042..390186,390387..390569,390645..391210)
location: region:374449-391210:1
so has part: feature:374449-374668:1:exon
so has part: feature:379891-379986:1:exon
so has part: feature:380107-380499:1:exon
so has part: feature:380640-380814:1:exon
so has part: feature:380903-381030:1:exon
so has part: feature:382240-382533:1:exon
so has part: feature:384617-384736:1:exon
so has part: feature:384908-385312:1:exon
so has part: feature:387353-387460:1:exon
so has part: feature:387645-387803:1:exon
so has part: feature:389630-389712:1:exon
so has part: feature:390042-390186:1:exon
so has part: feature:390387-390569:1:exon
so has part: feature:390645-391210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374449-374668:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379891-379986:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380107-380499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:380640-380814:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:380903-381030:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:382240-382533:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:384617-384736:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384908-385312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387353-387460:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387645-387803:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389630-389712:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:390042-390186:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390387-390569:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390645-391210:1:exon

BCAN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: BCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brevican core protein isoform X1
translation: MAPALPLLLLLWVFVPTVVPEGFGPGDGTEDLKALQVSIPRHPALDAVLAGDITIPCLITYLGPQPTAGMGGRRAVLGTPRVKWTFISEGREVEILVARGDRVKVSEDYRLRASLPIFHQRYTNASLLLTELRPNDSGIYRCDVQHGIEDGHDILDVKVKGVVFHYREGSMRYAYTFAEAQEACARIGASIATPEQLYAAYLGGYEQCDAGWIADQTVRYPIQTPREACYGDMNGFPGVRNYGVVDPEDMYDVYCYAEDLPGEIFLETAPDRFTLEEAAQRCRALGAELASPGQLYAAWNAGLDACSPGWLADGSVRYPIVTPRERCGGALPGVKTIFVFRNQTGFPDAQSRYDAYCFREGTNSFPEAAGKYQAQEPEENLLQEIVTVAEKLEELQLPRAQVEIESRGAIYAVPFFEDTDLRKPSQSPEDALGPGARHPPLATSVSSEEEQGAAPGRGPGSTSAESPGGGRDPGQPMEPEGPTGAPAESREPGGGRRRGHKSGGASPSLSAAEDAELSGDVVESPGVSPLPPAPPQTQEEGEEQSGAVWLPSAVRPGDGSTVPAVTPWHAELPGSSSAPAPGGEEAASPPPGSEEEEEEEEEQPAPSVETAEGFLTAVPGEAGGCVPNPCLNGGTCVEDGAHLTCLCLPGYGGSSCERPLWRCSPGWDSFQGACYKHFSTRRSWEDAETQCRHYGGHLATILTPEEQDFINDQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHPGQPDSYFLSGENCVVIVWHDGGQWSDVPCNYHLSYTCKMGLVQCGPPPALSNARAFGKPKQRYEVGSITRYQCRHGFAPRRSPIIRCRHDGTWEPPQLACRPGLAQPPNN
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(379899..379986,380107..380499,380640..380814,380903..381030,382240..382533,383669..383932,384617..384736,384908..385312,387353..387460,387645..387803,389630..389712,390042..390186,390387..390569,390645..390670)
location: region:379899-390670:1
so has part: feature:379899-379986:1:exon
so has part: feature:380107-380499:1:exon
so has part: feature:380640-380814:1:exon
so has part: feature:380903-381030:1:exon
so has part: feature:382240-382533:1:exon
so has part: feature:383669-383932:1:exon
so has part: feature:384617-384736:1:exon
so has part: feature:384908-385312:1:exon
so has part: feature:387353-387460:1:exon
so has part: feature:387645-387803:1:exon
so has part: feature:389630-389712:1:exon
so has part: feature:390042-390186:1:exon
so has part: feature:390387-390569:1:exon
so has part: feature:390645-390670:1:exon

XP_015505476.1
type: Protein
SIO_000068: ncbiprotein

position:379899:1
position: 379899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390670:1
position: 390670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379899-379986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380107-380499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380640-380814:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:380903-381030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382240-382533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:383669-383932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:384617-384736:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:384908-385312:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387353-387460:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:387645-387803:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389630-389712:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:390042-390186:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390387-390569:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390645-390670:1:exon

BCAN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: BCAN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: brevican core protein isoform X2
translation: MAPALPLLLLLWVFVPTVVPEGFGPGDGTEDLKALQVSIPRHPALDAVLAGDITIPCLITYLGPQPTAGMGGRRAVLGTPRVKWTFISEGREVEILVARGDRVKVSEDYRLRASLPIFHQRYTNASLLLTELRPNDSGIYRCDVQHGIEDGHDILDVKVKGVVFHYREGSMRYAYTFAEAQEACARIGASIATPEQLYAAYLGGYEQCDAGWIADQTVRYPIQTPREACYGDMNGFPGVRNYGVVDPEDMYDVYCYAEDLPGEIFLETAPDRFTLEEAAQRCRALGAELASPGQLYAAWNAGLDACSPGWLADGSVRYPIVTPRERCGGALPGVKTIFVFRNQTGFPDAQSRYDAYCFREEEQGAAPGRGPGSTSAESPGGGRDPGQPMEPEGPTGAPAESREPGGGRRRGHKSGGASPSLSAAEDAELSGDVVESPGVSPLPPAPPQTQEEGEEQSGAVWLPSAVRPGDGSTVPAVTPWHAELPGSSSAPAPGGEEAASPPPGSEEEEEEEEEQPAPSVETAEGFLTAVPGEAGGCVPNPCLNGGTCVEDGAHLTCLCLPGYGGSSCERPLWRCSPGWDSFQGACYKHFSTRRSWEDAETQCRHYGGHLATILTPEEQDFINDQYREYQWIGLNDRTIEGDFQWSDGSPLLYENWHPGQPDSYFLSGENCVVIVWHDGGQWSDVPCNYHLSYTCKMGLVQCGPPPALSNARAFGKPKQRYEVGSITRYQCRHGFAPRRSPIIRCRHDGTWEPPQLACRPGLAQPPNN
SIO_010081: BCAN
subclass of: SO_0000673
so part of: BCAN
location: join(379899..379986,380107..380499,380640..380814,380903..381030,382240..382533,384617..384736,384908..385312,387353..387460,387645..387803,389630..389712,390042..390186,390387..390569,390645..390670)
location: region:379899-390670:1
so has part: feature:379899-379986:1:exon
so has part: feature:380107-380499:1:exon
so has part: feature:380640-380814:1:exon
so has part: feature:380903-381030:1:exon
so has part: feature:382240-382533:1:exon
so has part: feature:384617-384736:1:exon
so has part: feature:384908-385312:1:exon
so has part: feature:387353-387460:1:exon
so has part: feature:387645-387803:1:exon
so has part: feature:389630-389712:1:exon
so has part: feature:390042-390186:1:exon
so has part: feature:390387-390569:1:exon
so has part: feature:390645-390670:1:exon

XP_015505477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:379899-379986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380107-380499:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380640-380814:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:380903-381030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:382240-382533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:384617-384736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:384908-385312:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387353-387460:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387645-387803:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:389630-389712:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:390042-390186:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:390387-390569:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390645-390670:1:exon

HAPLN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(391668..394958)
location: region:391668-394958:-1
so has part: feature:391668-394958:-1:exon
subclass of: SO_0000010

107214504
type: Gene
SIO_000068: ncbigene

position:391668:-1
position: 391668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394958:-1
position: 394958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391668-394958:-1:exon

HAPLN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: HAPLN2
product: hyaluronan and proteoglycan link protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015649988.2
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(391668..392430,392556..392741,392841..392957,393156..393506,393830..393943,394129..394958))
location: region:391668-394958:-1
so has part: feature:394129-394958:-1:exon
so has part: feature:393830-393943:-1:exon
so has part: feature:393156-393506:-1:exon
so has part: feature:392841-392957:-1:exon
so has part: feature:392556-392741:-1:exon
so has part: feature:391668-392430:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394129-394958:-1:exon

position:394129:-1
position: 394129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393830-393943:-1:exon

position:393830:-1
position: 393830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393943:-1
position: 393943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:393156-393506:-1:exon

position:393156:-1
position: 393156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393506:-1
position: 393506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:392841-392957:-1:exon

position:392841:-1
position: 392841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392957:-1
position: 392957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:392556-392741:-1:exon

position:392556:-1
position: 392556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392741:-1
position: 392741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:391668-392430:-1:exon

position:392430:-1
position: 392430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HAPLN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: HAPLN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hyaluronan and proteoglycan link protein 2
translation: MHRLLLLGCLWLLAAPPASSIFQRPTGTPAPPRLQYLLEPLHPAVHTRRGATATLPCVLRALPHNYRVKWSKVEPANYRENIIIITNGLYHKNYGPLSPRVRLRHSHRYDASLTITDVALEDEGRYRCQLVNGLEDESISLMLHLEGVVFPYQPSNGRYKFNYHEAKRACEQQDSRLATYQQLYKAWTEGLDWCNAGWILDGTVHYPIINSREPCGGRLLLPGVRTYGARDKQKDRFDAFCFTSALQGQVYFIRGHLNFKEAGQACRNHGAAIAKVGQLYSAWKFSQLDRCDGGWLADGSVRYPITTPRERCGGLPDPGVRSFGFPSKEMRTYGAYCFVGK
SIO_010081: HAPLN2
subclass of: SO_0000673
so part of: HAPLN2
location: complement(join(392147..392430,392556..392741,392841..392957,393156..393506,393830..393917))
location: region:392147-393917:-1
so has part: feature:393830-393917:-1:exon
so has part: feature:393156-393506:-1:exon
so has part: feature:392841-392957:-1:exon
so has part: feature:392556-392741:-1:exon
so has part: feature:392147-392430:-1:exon

XP_015505474.1
type: Protein
SIO_000068: ncbiprotein

position:392147:-1
position: 392147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393917:-1
position: 393917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:393830-393917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393156-393506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392841-392957:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:392556-392741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392147-392430:-1:exon

LOC107214502
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 396213..402567
location: region:396213-402567:1
so has part: feature:396213-402567:1:exon
subclass of: SO_0000010

107214502
type: Gene
SIO_000068: ncbigene

position:396213:1
position: 396213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402567:1
position: 402567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396213-402567:1:exon

LOC107214502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214502
product: ammonium transporter Rh type B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015649987.2
SIO_010081: LOC107214502
subclass of: SO_0000673
so part of: LOC107214502
location: join(396213..396653,397594..397780,398187..398337,398472..398625,398915..399081,399305..399442,399589..399722,399904..400025,400558..400631,401091..402567)
location: region:396213-402567:1
so has part: feature:396213-396653:1:exon
so has part: feature:397594-397780:1:exon
so has part: feature:398187-398337:1:exon
so has part: feature:398472-398625:1:exon
so has part: feature:398915-399081:1:exon
so has part: feature:399305-399442:1:exon
so has part: feature:399589-399722:1:exon
so has part: feature:399904-400025:1:exon
so has part: feature:400558-400631:1:exon
so has part: feature:401091-402567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:396213-396653:1:exon

position:396653:1
position: 396653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:397594-397780:1:exon

position:397594:1
position: 397594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397780:1
position: 397780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398187-398337:1:exon

position:398187:1
position: 398187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398337:1
position: 398337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:398472-398625:1:exon

position:398472:1
position: 398472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398625:1
position: 398625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:398915-399081:1:exon

position:398915:1
position: 398915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399081:1
position: 399081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:399305-399442:1:exon

position:399305:1
position: 399305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399442:1
position: 399442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:399589-399722:1:exon

position:399589:1
position: 399589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399722:1
position: 399722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:399904-400025:1:exon

position:399904:1
position: 399904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400025:1
position: 400025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:400558-400631:1:exon

position:400558:1
position: 400558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400631:1
position: 400631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:401091-402567:1:exon

position:401091:1
position: 401091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ammonium transporter Rh type B
translation: MEACQGIQCRVSVLAALSRSRHSLRGAGDEGRTWQPHWQEEFAVPAWLSSCTPFAVVHLPWLSPNMPEHTAASRLRLSGLCFLLQILNILLFAVFVRYSPESSPGLCPPQLNCSHRNQDPAFQQRHFQDVHIQVLLSFGLLVAFLSRYGPGSAAISILIIAFTIQWALLIQGFFYFFLNGKIYMGAPSMVSADFCTAAVLISAGAVLGRVNPVQMLLLALLEVTLCTLNEYILLSLMGVSDSGRSLTVHTFGAYFGLVVSRVLYQPCRDKRKREERQDMGHQTDVFAVVGTIYLWIFWPSFTSATTAHDNAENWAVLNSYLSLVASTIATFILSPVLYEESTPRMVQIQDATLAGMAVMGMAGEMLVTPFGALIAGFLVGLISPLGFRFFTPVLHSRWKIQDTWGVHNIHGLPGILGALLGTLLTLLATADTYGDRLELVFPLVAQGSRTVTDQAFIQLGALPLTLLFAALGGWVTGAILKIKMLRCSADAQYMENTVLWEVAEEGCEHRASGKELGISTLV
SIO_010081: LOC107214502
subclass of: SO_0000673
so part of: LOC107214502
location: join(396278..396653,397594..397780,398187..398337,398472..398625,398915..399081,399305..399442,399589..399722,399904..400025,400558..400631,401091..401156)
location: region:396278-401156:1
so has part: feature:396278-396653:1:exon
so has part: feature:397594-397780:1:exon
so has part: feature:398187-398337:1:exon
so has part: feature:398472-398625:1:exon
so has part: feature:398915-399081:1:exon
so has part: feature:399305-399442:1:exon
so has part: feature:399589-399722:1:exon
so has part: feature:399904-400025:1:exon
so has part: feature:400558-400631:1:exon
so has part: feature:401091-401156:1:exon

XP_015505473.1
type: Protein
SIO_000068: ncbiprotein

position:396278:1
position: 396278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401156:1
position: 401156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396278-396653:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:397594-397780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398187-398337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:398472-398625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:398915-399081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:399305-399442:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:399589-399722:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:399904-400025:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:400558-400631:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:401091-401156:1:exon

LOC107214591
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214591
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(436999..460646)
location: region:436999-460646:-1
so has part: feature:436999-460646:-1:exon
subclass of: SO_0000011

107214591
type: Gene
SIO_000068: ncbigene

position:436999:-1
position: 436999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460646:-1
position: 460646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436999-460646:-1:exon

LOC107214591
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107214591
product: uncharacterized LOC107214591, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_001524978.1
SIO_010081: LOC107214591
subclass of: SO_0000673
so part of: LOC107214591
location: complement(join(436999..437383,444836..445198,445610..445701,460540..460646))
location: region:436999-460646:-1
so has part: feature:460540-460646:-1:exon
so has part: feature:445610-445701:-1:exon
so has part: feature:444836-445198:-1:exon
so has part: feature:436999-437383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460540-460646:-1:exon

position:460540:-1
position: 460540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445610-445701:-1:exon

position:445610:-1
position: 445610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445701:-1
position: 445701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:444836-445198:-1:exon

position:444836:-1
position: 444836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445198:-1
position: 445198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:436999-437383:-1:exon

position:437383:-1
position: 437383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107214591
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107214591
product: uncharacterized LOC107214591, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_001524979.1
SIO_010081: LOC107214591
subclass of: SO_0000673
so part of: LOC107214591
location: complement(join(436999..437383,444836..445198,445610..445701,451140..451185,460540..460646))
location: region:436999-460646:-1
so has part: feature:460540-460646:-1:exon
so has part: feature:451140-451185:-1:exon
so has part: feature:445610-445701:-1:exon
so has part: feature:444836-445198:-1:exon
so has part: feature:436999-437383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460540-460646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451140-451185:-1:exon

position:451140:-1
position: 451140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451185:-1
position: 451185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445610-445701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:444836-445198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436999-437383:-1:exon

LOC107214538
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214538
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 466608..468670
location: region:466608-468670:1
so has part: feature:466608-468670:1:exon
subclass of: SO_0000011

107214538
type: Gene
SIO_000068: ncbigene

position:466608:1
position: 466608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468670:1
position: 468670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466608-468670:1:exon

LOC107214538
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107214538
product: uncharacterized LOC107214538, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004500249.1
SIO_010081: LOC107214538
subclass of: SO_0000673
so part of: LOC107214538
location: join(466608..466703,467182..467320,468582..468670)
location: region:466608-468670:1
so has part: feature:466608-466703:1:exon
so has part: feature:467182-467320:1:exon
so has part: feature:468582-468670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466608-466703:1:exon

position:466703:1
position: 466703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467182-467320:1:exon

position:467182:1
position: 467182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467320:1
position: 467320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:468582-468670:1:exon

position:468582:1
position: 468582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214538
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107214538
product: uncharacterized LOC107214538, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001524966.2
SIO_010081: LOC107214538
subclass of: SO_0000673
so part of: LOC107214538
location: join(466815..466980,467182..467320,468582..468670)
location: region:466815-468670:1
so has part: feature:466815-466980:1:exon
so has part: feature:467182-467320:1:exon
so has part: feature:468582-468670:1:exon

position:466815:1
position: 466815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466815-466980:1:exon

position:466980:1
position: 466980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467182-467320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468582-468670:1:exon

LOC107214538
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107214538
product: uncharacterized LOC107214538, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_001524967.2
SIO_010081: LOC107214538
subclass of: SO_0000673
so part of: LOC107214538
location: join(466815..466968,467182..467320,468582..468670)
location: region:466815-468670:1
so has part: feature:466815-466968:1:exon
so has part: feature:467182-467320:1:exon
so has part: feature:468582-468670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:466815-466968:1:exon

position:466968:1
position: 466968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467182-467320:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468582-468670:1:exon

MEF2D
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(479322..560147)
location: region:479322-560147:-1
so has part: feature:479322-560147:-1:exon
subclass of: SO_0000010

107214565
type: Gene
SIO_000068: ncbigene

position:479322:-1
position: 479322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560147:-1
position: 560147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479322-560147:-1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015650090.2
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(479322..486242,487605..487836,491814..491943,495401..495591,499720..499776,502355..502565,505762..505896,513246..513449,519212..519501,535159..535227,560068..560147))
location: region:479322-560147:-1
so has part: feature:560068-560147:-1:exon
so has part: feature:535159-535227:-1:exon
so has part: feature:519212-519501:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:505762-505896:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:479322-486242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560068-560147:-1:exon

position:560068:-1
position: 560068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535159-535227:-1:exon

position:535159:-1
position: 535159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535227:-1
position: 535227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:519212-519501:-1:exon

position:519212:-1
position: 519212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519501:-1
position: 519501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:513246-513449:-1:exon

position:513246:-1
position: 513246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513449:-1
position: 513449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:505762-505896:-1:exon

position:505762:-1
position: 505762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505896:-1
position: 505896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:502355-502565:-1:exon

position:502355:-1
position: 502355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502565:-1
position: 502565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:499720-499776:-1:exon

position:499720:-1
position: 499720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499776:-1
position: 499776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:495401-495591:-1:exon

position:495401:-1
position: 495401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495591:-1
position: 495591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:491814-491943:-1:exon

position:491814:-1
position: 491814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491943:-1
position: 491943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:487605-487836:-1:exon

position:487605:-1
position: 487605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487836:-1
position: 487836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:479322-486242:-1:exon

position:486242:-1
position: 486242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015650088.2
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(479322..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,505762..505896,513246..513449,519212..519501,535159..535227,560068..560147))
location: region:479322-560147:-1
so has part: feature:560068-560147:-1:exon
so has part: feature:535159-535227:-1:exon
so has part: feature:519212-519501:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:505762-505896:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:479322-486242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560068-560147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535159-535227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519212-519501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:505762-505896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495076-495096:-1:exon

position:495076:-1
position: 495076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:495096:-1
position: 495096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479322-486242:-1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015650089.2
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(479322..486242,487605..487836,491814..491943,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519501,535159..535227,560068..560147))
location: region:479322-560147:-1
so has part: feature:560068-560147:-1:exon
so has part: feature:535159-535227:-1:exon
so has part: feature:519212-519501:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:479322-486242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560068-560147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535159-535227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519212-519501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506027-506164:-1:exon

position:506027:-1
position: 506027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506164:-1
position: 506164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479322-486242:-1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015650082.2
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(479322..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519501,535159..535227,560068..560147))
location: region:479322-560147:-1
so has part: feature:560068-560147:-1:exon
so has part: feature:535159-535227:-1:exon
so has part: feature:519212-519501:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:479322-486242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:560068-560147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535159-535227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519212-519501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479322-486242:-1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015650083.2
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(479322..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519501,535159..535227,559621..559753))
location: region:479322-559753:-1
so has part: feature:559621-559753:-1:exon
so has part: feature:535159-535227:-1:exon
so has part: feature:519212-519501:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:479322-486242:-1:exon

position:559753:-1
position: 559753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559621-559753:-1:exon

position:559621:-1
position: 559621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535159-535227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519212-519501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479322-486242:-1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015650084.2
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(479322..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519501,535159..535227,559616..559753))
location: region:479322-559753:-1
so has part: feature:559616-559753:-1:exon
so has part: feature:535159-535227:-1:exon
so has part: feature:519212-519501:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:479322-486242:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559616-559753:-1:exon

position:559616:-1
position: 559616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535159-535227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519212-519501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479322-486242:-1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015650085.3
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(479322..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519501,535159..535227,540283..540388))
location: region:479322-540388:-1
so has part: feature:540283-540388:-1:exon
so has part: feature:535159-535227:-1:exon
so has part: feature:519212-519501:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:479322-486242:-1:exon

position:540388:-1
position: 540388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540283-540388:-1:exon

position:540283:-1
position: 540283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535159-535227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:519212-519501:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:479322-486242:-1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015650087.3
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(479322..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519501,532567..532726))
location: region:479322-532726:-1
so has part: feature:532567-532726:-1:exon
so has part: feature:519212-519501:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:479322-486242:-1:exon

position:532726:-1
position: 532726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532567-532726:-1:exon

position:532567:-1
position: 532567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519212-519501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479322-486242:-1:exon

MEF2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MEF2D
product: myocyte enhancer factor 2D, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015650086.3
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(479322..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519501,531440..531527))
location: region:479322-531527:-1
so has part: feature:531440-531527:-1:exon
so has part: feature:519212-519501:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:479322-486242:-1:exon

position:531527:-1
position: 531527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531440-531527:-1:exon

position:531440:-1
position: 531440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519212-519501:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479322-486242:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X4
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIEALNKKHRECESPEGDEVFALTPQTEEKYKKIDEEFDKMMQSYRLASTVPAPNFAMPVTVPVSNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPSSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(485912..486242,487605..487836,491814..491943,495401..495591,499720..499776,502355..502565,505762..505896,513246..513449,519212..519265))
location: region:485912-519265:-1
so has part: feature:519212-519265:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:505762-505896:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:485912-486242:-1:exon

XP_015505576.1
type: Protein
SIO_000068: ncbiprotein

position:485912:-1
position: 485912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519265:-1
position: 519265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519212-519265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505762-505896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485912-486242:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X2
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIEALNKKHRECESPEGDEVFALTPQTEEKYKKIDEEFDKMMQSYRLASTVPAPNFAMPVTVPVSNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPSSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(485912..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,505762..505896,513246..513449,519212..519265))
location: region:485912-519265:-1
so has part: feature:519212-519265:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:505762-505896:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:485912-486242:-1:exon

XP_015505574.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519212-519265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505762-505896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485912-486242:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X3
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVSNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPSSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(485912..486242,487605..487836,491814..491943,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519265))
location: region:485912-519265:-1
so has part: feature:519212-519265:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:485912-486242:-1:exon

XP_015505575.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519212-519265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485912-486242:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVSNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPSSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(485912..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519265))
location: region:485912-519265:-1
so has part: feature:519212-519265:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:485912-486242:-1:exon

XP_015505568.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519212-519265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485912-486242:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVSNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPSSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(485912..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519265))
location: region:485912-519265:-1
so has part: feature:519212-519265:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:485912-486242:-1:exon

XP_015505569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519212-519265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485912-486242:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVSNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPSSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(485912..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519265))
location: region:485912-519265:-1
so has part: feature:519212-519265:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:485912-486242:-1:exon

XP_015505570.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519212-519265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485912-486242:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVSNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPSSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(485912..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519265))
location: region:485912-519265:-1
so has part: feature:519212-519265:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:485912-486242:-1:exon

XP_015505571.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519212-519265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485912-486242:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVSNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPSSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(485912..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519265))
location: region:485912-519265:-1
so has part: feature:519212-519265:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:485912-486242:-1:exon

XP_015505572.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519212-519265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485912-486242:-1:exon

MEF2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MEF2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myocyte-specific enhancer factor 2D isoform X1
translation: MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGDDSIDQSPLMEDKYRKGSEDLDILFKRYGSTVPAPNFAMPVTVPVSNQNTLQFSNPGSSLVTQSLVTSSLTDPRLLSPQQPALQRNTVSPGLPQRPASAGAMLGGDLNNTNGACPSPVGNGYVSARASPGLLPVSNGSSLGKIIPAKSPPPPSHGTQLAANSRKPDLRVITSQSGKGLMHHLTEDHLALQNTQRLGVSQATHSLTTPVVSVATPSLLTQGLPFSAMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGNISAWQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQPQQQHLVPVSLGNLIQGSHLSHTTTLTVNTNPNISIKSEPVSPNRERNTATPLSTFPHQPRHEPTGRSPVDSLSSNTSSYEGSSERDDPARPDFGSSLGLLRPSSEPEGESPSVKRMRLDTWVT
SIO_010081: MEF2D
subclass of: SO_0000673
so part of: MEF2D
location: complement(join(485912..486242,487605..487836,491814..491943,495076..495096,495401..495591,499720..499776,502355..502565,506027..506164,513246..513449,519212..519265))
location: region:485912-519265:-1
so has part: feature:519212-519265:-1:exon
so has part: feature:513246-513449:-1:exon
so has part: feature:506027-506164:-1:exon
so has part: feature:502355-502565:-1:exon
so has part: feature:499720-499776:-1:exon
so has part: feature:495401-495591:-1:exon
so has part: feature:495076-495096:-1:exon
so has part: feature:491814-491943:-1:exon
so has part: feature:487605-487836:-1:exon
so has part: feature:485912-486242:-1:exon

XP_015505573.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:519212-519265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513246-513449:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:506027-506164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502355-502565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499720-499776:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495401-495591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495076-495096:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491814-491943:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487605-487836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485912-486242:-1:exon

IQGAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(582626..597210)
location: region:582626-597210:-1
so has part: feature:582626-597210:-1:exon
subclass of: SO_0000010

107214597
type: Gene
SIO_000068: ncbigene

position:582626:-1
position: 582626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597210:-1
position: 597210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582626-597210:-1:exon

IQGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: IQGAP3
product: IQ motif containing GTPase activating protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033519748.1
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(582626..584007,584262..584370,584742..584843,584989..585155,585254..585466,585720..585807,585970..586114,586262..586364,586662..586794,586883..587115,587399..587483,587931..588071,588157..588381,588555..588718,588831..588983,589198..589406,589775..589844,590078..590149,590305..590388,590689..590859,590933..591075,591193..591360,591440..591530,591721..591884,592066..592190,592432..592592,592753..592916,593041..593128,593314..593477,593692..593779,594080..594258,594670..594783,595046..595113,595252..595328,595515..595592,595882..596038,596369..596456,597204..597210))
location: region:582626-597210:-1
so has part: feature:597204-597210:-1:exon
so has part: feature:596369-596456:-1:exon
so has part: feature:595882-596038:-1:exon
so has part: feature:595515-595592:-1:exon
so has part: feature:595252-595328:-1:exon
so has part: feature:595046-595113:-1:exon
so has part: feature:594670-594783:-1:exon
so has part: feature:594080-594258:-1:exon
so has part: feature:593692-593779:-1:exon
so has part: feature:593314-593477:-1:exon
so has part: feature:593041-593128:-1:exon
so has part: feature:592753-592916:-1:exon
so has part: feature:592432-592592:-1:exon
so has part: feature:592066-592190:-1:exon
so has part: feature:591721-591884:-1:exon
so has part: feature:591440-591530:-1:exon
so has part: feature:591193-591360:-1:exon
so has part: feature:590933-591075:-1:exon
so has part: feature:590689-590859:-1:exon
so has part: feature:590305-590388:-1:exon
so has part: feature:590078-590149:-1:exon
so has part: feature:589775-589844:-1:exon
so has part: feature:589198-589406:-1:exon
so has part: feature:588831-588983:-1:exon
so has part: feature:588555-588718:-1:exon
so has part: feature:588157-588381:-1:exon
so has part: feature:587931-588071:-1:exon
so has part: feature:587399-587483:-1:exon
so has part: feature:586883-587115:-1:exon
so has part: feature:586662-586794:-1:exon
so has part: feature:586262-586364:-1:exon
so has part: feature:585970-586114:-1:exon
so has part: feature:585720-585807:-1:exon
so has part: feature:585254-585466:-1:exon
so has part: feature:584989-585155:-1:exon
so has part: feature:584742-584843:-1:exon
so has part: feature:584262-584370:-1:exon
so has part: feature:582626-584007:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597204-597210:-1:exon

position:597204:-1
position: 597204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:596369-596456:-1:exon

position:596369:-1
position: 596369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596456:-1
position: 596456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:595882-596038:-1:exon

position:595882:-1
position: 595882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596038:-1
position: 596038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:595515-595592:-1:exon

position:595515:-1
position: 595515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595592:-1
position: 595592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:595252-595328:-1:exon

position:595252:-1
position: 595252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595328:-1
position: 595328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:595046-595113:-1:exon

position:595046:-1
position: 595046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595113:-1
position: 595113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:594670-594783:-1:exon

position:594670:-1
position: 594670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594783:-1
position: 594783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:594080-594258:-1:exon

position:594080:-1
position: 594080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594258:-1
position: 594258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:593692-593779:-1:exon

position:593692:-1
position: 593692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593779:-1
position: 593779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:593314-593477:-1:exon

position:593314:-1
position: 593314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593477:-1
position: 593477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:593041-593128:-1:exon

position:593041:-1
position: 593041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593128:-1
position: 593128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:592753-592916:-1:exon

position:592753:-1
position: 592753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592916:-1
position: 592916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:592432-592592:-1:exon

position:592432:-1
position: 592432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592592:-1
position: 592592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:592066-592190:-1:exon

position:592066:-1
position: 592066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592190:-1
position: 592190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:591721-591884:-1:exon

position:591721:-1
position: 591721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591884:-1
position: 591884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:591440-591530:-1:exon

position:591440:-1
position: 591440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591530:-1
position: 591530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:591193-591360:-1:exon

position:591193:-1
position: 591193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591360:-1
position: 591360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:590933-591075:-1:exon

position:590933:-1
position: 590933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591075:-1
position: 591075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:590689-590859:-1:exon

position:590689:-1
position: 590689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590859:-1
position: 590859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:590305-590388:-1:exon

position:590305:-1
position: 590305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590388:-1
position: 590388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:590078-590149:-1:exon

position:590078:-1
position: 590078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590149:-1
position: 590149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:589775-589844:-1:exon

position:589775:-1
position: 589775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589844:-1
position: 589844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:589198-589406:-1:exon

position:589198:-1
position: 589198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589406:-1
position: 589406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:588831-588983:-1:exon

position:588831:-1
position: 588831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588983:-1
position: 588983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:588555-588718:-1:exon

position:588555:-1
position: 588555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588718:-1
position: 588718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:588157-588381:-1:exon

position:588157:-1
position: 588157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588381:-1
position: 588381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:587931-588071:-1:exon

position:587931:-1
position: 587931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588071:-1
position: 588071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:587399-587483:-1:exon

position:587399:-1
position: 587399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587483:-1
position: 587483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:586883-587115:-1:exon

position:586883:-1
position: 586883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587115:-1
position: 587115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:586662-586794:-1:exon

position:586662:-1
position: 586662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586794:-1
position: 586794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:586262-586364:-1:exon

position:586262:-1
position: 586262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586364:-1
position: 586364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:585970-586114:-1:exon

position:585970:-1
position: 585970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586114:-1
position: 586114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:585720-585807:-1:exon

position:585720:-1
position: 585720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585807:-1
position: 585807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:585254-585466:-1:exon

position:585254:-1
position: 585254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585466:-1
position: 585466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:584989-585155:-1:exon

position:584989:-1
position: 584989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585155:-1
position: 585155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:584742-584843:-1:exon

position:584742:-1
position: 584742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584843:-1
position: 584843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:584262-584370:-1:exon

position:584262:-1
position: 584262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584370:-1
position: 584370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:582626-584007:-1:exon

position:584007:-1
position: 584007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IQGAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: IQGAP3
product: IQ motif containing GTPase activating protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033519747.1
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(582626..584007,584262..584370,584742..584843,584989..585155,585254..585466,585720..585807,585970..586189,586262..586364,586662..586794,586883..587115,587399..587483,587931..588071,588157..588381,588555..588718,588831..588983,589198..589406,589775..589844,590078..590149,590305..590388,590689..590859,590933..591075,591193..591360,591440..591530,591721..591884,592066..592190,592432..592592,592753..592916,593041..593128,593314..593477,593692..593779,594080..594258,594670..594783,595046..595113,595252..595328,595515..595592,595882..596038,596369..596456,597204..597210))
location: region:582626-597210:-1
so has part: feature:597204-597210:-1:exon
so has part: feature:596369-596456:-1:exon
so has part: feature:595882-596038:-1:exon
so has part: feature:595515-595592:-1:exon
so has part: feature:595252-595328:-1:exon
so has part: feature:595046-595113:-1:exon
so has part: feature:594670-594783:-1:exon
so has part: feature:594080-594258:-1:exon
so has part: feature:593692-593779:-1:exon
so has part: feature:593314-593477:-1:exon
so has part: feature:593041-593128:-1:exon
so has part: feature:592753-592916:-1:exon
so has part: feature:592432-592592:-1:exon
so has part: feature:592066-592190:-1:exon
so has part: feature:591721-591884:-1:exon
so has part: feature:591440-591530:-1:exon
so has part: feature:591193-591360:-1:exon
so has part: feature:590933-591075:-1:exon
so has part: feature:590689-590859:-1:exon
so has part: feature:590305-590388:-1:exon
so has part: feature:590078-590149:-1:exon
so has part: feature:589775-589844:-1:exon
so has part: feature:589198-589406:-1:exon
so has part: feature:588831-588983:-1:exon
so has part: feature:588555-588718:-1:exon
so has part: feature:588157-588381:-1:exon
so has part: feature:587931-588071:-1:exon
so has part: feature:587399-587483:-1:exon
so has part: feature:586883-587115:-1:exon
so has part: feature:586662-586794:-1:exon
so has part: feature:586262-586364:-1:exon
so has part: feature:585970-586189:-1:exon
so has part: feature:585720-585807:-1:exon
so has part: feature:585254-585466:-1:exon
so has part: feature:584989-585155:-1:exon
so has part: feature:584742-584843:-1:exon
so has part: feature:584262-584370:-1:exon
so has part: feature:582626-584007:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:597204-597210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:596369-596456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595882-596038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595515-595592:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595252-595328:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:595046-595113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:594670-594783:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:594080-594258:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:593692-593779:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:593314-593477:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:593041-593128:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592753-592916:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592432-592592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592066-592190:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591721-591884:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:591440-591530:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:591193-591360:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:590933-591075:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:590689-590859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:590305-590388:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:590078-590149:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:589775-589844:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:589198-589406:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:588831-588983:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:588555-588718:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:588157-588381:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:587931-588071:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:587399-587483:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:586883-587115:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:586662-586794:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:586262-586364:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:585970-586189:-1:exon

position:586189:-1
position: 586189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:585720-585807:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:585254-585466:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:584989-585155:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:584742-584843:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:584262-584370:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:582626-584007:-1:exon

IQGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3 isoform X2
translation: MDEQRRQNDAYQYLCHLEEAKRWMEACLGEVLPPPTELEETLRNGVLLAKLGHCFAPAIVPLKKIYDPEQTRYKAAGLHFRHTDNINHWRNAMSHVGLPSIFHPETTDIYDKKNMPRVVYCIHALSFYLFKLGLAPPIQDLYGKVNFTEEEINNMKQELEKYGLQLPAFSKIGGILANELSVDEAAVHAAVLAINKAVDRRVVAQTMETLHNPHAMLVGLREELAGAYQEVLHQAKLEKGSNARNRYPQVIPEGEDVYDWCLTQAEIQGNIIKVNVRGALEEVDNALERQDVLALHRALWDPTLALSCLQRDNLELYLEQLSTDREEKALELGYLELLEQEEVQAGILTANRRDEKERAMLQAVSQINAAVRRGMPAETLEALMDPAAQLPDVHAPAALLYQQQLALLQCQHPRGELAQEELFVAVEMLSTVALVNQALDARNPTRLWSSLVSPALGLSGVEDANAQRYFDDLLQLKGQSRKAGAEFLSWNDIQDSINSTNSSVQDENDRAHAVRLVNEALLQADPEKTLAALLLLAPALPDIALPTAPRYHNVLSRARRQKVQATEDNGAVLWWEEIQKGVFQANQDTVAARSMALGTAAINQAIKEGKASQTLRVLCNPDVALRGVVNACADAYQEQLAALMATKRPAGGMKPSWIRHRLLDGAEYYLNLQTLEGSWQCPRNGSFNTTHLSREEIQLVVTQVTVAHDRECLWASNVALVVRLQARLRGFLVRQQFTARRHILQEQRPAAIRIQACWRGYRQRRAYLERLHYLKSHTEAAIKIQAAVRMWQAQRKYQERLRYFRQNIKAIIKIQAFVRANKARGDYRMLVHTKSPALGIVRRFIHLLEQSQHDFWEESEVLRLQEELVKRIRASRQLESDLDLMDIKIGLLVKNRITLQEVVSHCKKLTKKNKEQLSEMMSMDKQKGLKSLSKEKRQKLEAYQHLFYLLQTQPVYLARLIFQMPQNKSTKFMESVIFTLYNYASNPREAYLLLQLFKVALQEEIRSKVDQVHDILTGNATVIRLVVSFYRNVRGQNALRHILAGPVQEVLQDKTLSIRTDPVDIYKAWINQTESQSGHRSKLPYEVSPEQALSHPEVQRQLDISIRNLLAITDKFVSAITSSVDKIPYGMRYMAKILRMSLVEKFPKASAEEVDKVVGNLLYYRFMNPAVVAPDGFDVVDVSARAALQPEQRRSLGSIAKVLQHAAARKAFQGESAHLCGVNQYLEDTHNKFRRFISAACCVPEPEERFNMDEYSEMVAVAKPVIYITVGELINTHKLLLEHQDSIAPHHSDPLHELLEDLDELPTVQSLVGESVASLGDSGAEQVLSQLSRTEISLTLTNKLVPVASSEESDTRSLLLSTKQMLVDLIQSQPGDSLPEILRTPASEHEEAAHEHLMCRRALQDTQSSAQLKRHRSLAANSRLSMEEKKRKVIRNLRRLESLGLVDSANCYQELIDELAKDIRNQRRHRQQRRRELLKLRQTLEGLDAKTLFYEEQIDYYNQYIKTCLDNLAASSKVSGKSKKLPSLHYTAAQLWEKGVLLEIQDLPPSQLKNVIFDIIPCEESGRFQVKAKFMGIDMECFQLHYQDLLQLQYEGVAVMRMFDKAKVNVNLLIFLLNKKFFKK
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(583894..584007,584262..584370,584742..584843,584989..585155,585254..585466,585720..585807,585970..586114,586262..586364,586662..586794,586883..587115,587399..587483,587931..588071,588157..588381,588555..588718,588831..588983,589198..589406,589775..589844,590078..590149,590305..590388,590689..590859,590933..591075,591193..591360,591440..591530,591721..591884,592066..592190,592432..592592,592753..592916,593041..593128,593314..593477,593692..593779,594080..594258,594670..594783,595046..595113,595252..595328,595515..595592,595882..596038,596369..596433))
location: region:583894-596433:-1
so has part: feature:596369-596433:-1:exon
so has part: feature:595882-596038:-1:exon
so has part: feature:595515-595592:-1:exon
so has part: feature:595252-595328:-1:exon
so has part: feature:595046-595113:-1:exon
so has part: feature:594670-594783:-1:exon
so has part: feature:594080-594258:-1:exon
so has part: feature:593692-593779:-1:exon
so has part: feature:593314-593477:-1:exon
so has part: feature:593041-593128:-1:exon
so has part: feature:592753-592916:-1:exon
so has part: feature:592432-592592:-1:exon
so has part: feature:592066-592190:-1:exon
so has part: feature:591721-591884:-1:exon
so has part: feature:591440-591530:-1:exon
so has part: feature:591193-591360:-1:exon
so has part: feature:590933-591075:-1:exon
so has part: feature:590689-590859:-1:exon
so has part: feature:590305-590388:-1:exon
so has part: feature:590078-590149:-1:exon
so has part: feature:589775-589844:-1:exon
so has part: feature:589198-589406:-1:exon
so has part: feature:588831-588983:-1:exon
so has part: feature:588555-588718:-1:exon
so has part: feature:588157-588381:-1:exon
so has part: feature:587931-588071:-1:exon
so has part: feature:587399-587483:-1:exon
so has part: feature:586883-587115:-1:exon
so has part: feature:586662-586794:-1:exon
so has part: feature:586262-586364:-1:exon
so has part: feature:585970-586114:-1:exon
so has part: feature:585720-585807:-1:exon
so has part: feature:585254-585466:-1:exon
so has part: feature:584989-585155:-1:exon
so has part: feature:584742-584843:-1:exon
so has part: feature:584262-584370:-1:exon
so has part: feature:583894-584007:-1:exon

XP_033375639.1
type: Protein
SIO_000068: ncbiprotein

position:583894:-1
position: 583894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596433:-1
position: 596433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:596369-596433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595882-596038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595515-595592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595252-595328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595046-595113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594670-594783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:594080-594258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:593692-593779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:593314-593477:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:593041-593128:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:592753-592916:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592432-592592:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592066-592190:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:591721-591884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591440-591530:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:591193-591360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590933-591075:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:590689-590859:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:590305-590388:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:590078-590149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:589775-589844:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:589198-589406:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:588831-588983:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:588555-588718:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:588157-588381:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:587931-588071:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:587399-587483:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:586883-587115:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:586662-586794:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:586262-586364:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:585970-586114:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:585720-585807:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:585254-585466:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:584989-585155:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:584742-584843:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:584262-584370:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:583894-584007:-1:exon

IQGAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: IQGAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras GTPase-activating-like protein IQGAP3 isoform X1
translation: MDEQRRQNDAYQYLCHLEEAKRWMEACLGEVLPPPTELEETLRNGVLLAKLGHCFAPAIVPLKKIYDPEQTRYKAAGLHFRHTDNINHWRNAMSHVGLPSIFHPETTDIYDKKNMPRVVYCIHALSFYLFKLGLAPPIQDLYGKVNFTEEEINNMKQELEKYGLQLPAFSKIGGILANELSVDEAAVHAAVLAINKAVDRRVVAQTMETLHNPHAMLVGLREELAGAYQEVLHQAKLEKGSNARNRYPQVIPEGEDVYDWCLTQAEIQGNIIKVNVRGALEEVDNALERQDVLALHRALWDPTLALSCLQRDNLELYLEQLSTDREEKALELGYLELLEQEEVQAGILTANRRDEKERAMLQAVSQINAAVRRGMPAETLEALMDPAAQLPDVHAPAALLYQQQLALLQCQHPRGELAQEELFVAVEMLSTVALVNQALDARNPTRLWSSLVSPALGLSGVEDANAQRYFDDLLQLKGQSRKAGAEFLSWNDIQDSINSTNSSVQDENDRAHAVRLVNEALLQADPEKTLAALLLLAPALPDIALPTAPRYHNVLSRARRQKVQATEDNGAVLWWEEIQKGVFQANQDTVAARSMALGTAAINQAIKEGKASQTLRVLCNPDVALRGVVNACADAYQEQLAALMATKRPAGGMKPSWIRHRLLDGAEYYLNLQTLEGSWQCPRNGSFNTTHLSREEIQLVVTQVTVAHDRECLWASNVALVVRLQARLRGFLVRQQFTARRHILQEQRPAAIRIQACWRGYRQRRAYLERLHYLKSHTEAAIKIQAAVRMWQAQRKYQERLRYFRQNIKAIIKIQAFVRANKARGDYRMLVHTKSPALGIVRRFIHLLEQSQHDFWEESEVLRLQEELVKRIRASRQLESDLDLMDIKIGLLVKNRITLQEVVSHCKKLTKKNKEQLSEMMSMDKQKGLKSLSKEKRQKLEAYQHLFYLLQTQPVYLARLIFQMPQNKSTKFMESVIFTLYNYASNPREAYLLLQLFKVALQEEIRSKVDQVHDILTGNATVIRLVVSFYRNVRGQNALRHILAGPVQEVLQDKTLSIRTDPVDIYKAWINQTESQSGHRSKLPYEVSPEQALSHPEVQRQLDISIRNLLAITDKFVSAITSSVDKIPYGMRYMAKILRMSLVEKFPKASAEEVDKVVGNLLYYRFMNPAVVAPDGFDVVDVSARAALQPEQRRSLGSIAKVLQHAAARKAFQGESAHLCGVNQYLEDTHNKFRRFISAACCVPEPEERFNMDEYSEMVAVAKPVIYITVGELINTHKLLLEHQDSIAPHHSDPLHELLEDLDELPTVQSLVGSLSWTALGMGSQPNTASRALSALAGESVASLGDSGAEQVLSQLSRTEISLTLTNKLVPVASSEESDTRSLLLSTKQMLVDLIQSQPGDSLPEILRTPASEHEEAAHEHLMCRRALQDTQSSAQLKRHRSLAANSRLSMEEKKRKVIRNLRRLESLGLVDSANCYQELIDELAKDIRNQRRHRQQRRRELLKLRQTLEGLDAKTLFYEEQIDYYNQYIKTCLDNLAASSKVSGKSKKLPSLHYTAAQLWEKGVLLEIQDLPPSQLKNVIFDIIPCEESGRFQVKAKFMGIDMECFQLHYQDLLQLQYEGVAVMRMFDKAKVNVNLLIFLLNKKFFKK
SIO_010081: IQGAP3
subclass of: SO_0000673
so part of: IQGAP3
location: complement(join(583894..584007,584262..584370,584742..584843,584989..585155,585254..585466,585720..585807,585970..586189,586262..586364,586662..586794,586883..587115,587399..587483,587931..588071,588157..588381,588555..588718,588831..588983,589198..589406,589775..589844,590078..590149,590305..590388,590689..590859,590933..591075,591193..591360,591440..591530,591721..591884,592066..592190,592432..592592,592753..592916,593041..593128,593314..593477,593692..593779,594080..594258,594670..594783,595046..595113,595252..595328,595515..595592,595882..596038,596369..596433))
location: region:583894-596433:-1
so has part: feature:596369-596433:-1:exon
so has part: feature:595882-596038:-1:exon
so has part: feature:595515-595592:-1:exon
so has part: feature:595252-595328:-1:exon
so has part: feature:595046-595113:-1:exon
so has part: feature:594670-594783:-1:exon
so has part: feature:594080-594258:-1:exon
so has part: feature:593692-593779:-1:exon
so has part: feature:593314-593477:-1:exon
so has part: feature:593041-593128:-1:exon
so has part: feature:592753-592916:-1:exon
so has part: feature:592432-592592:-1:exon
so has part: feature:592066-592190:-1:exon
so has part: feature:591721-591884:-1:exon
so has part: feature:591440-591530:-1:exon
so has part: feature:591193-591360:-1:exon
so has part: feature:590933-591075:-1:exon
so has part: feature:590689-590859:-1:exon
so has part: feature:590305-590388:-1:exon
so has part: feature:590078-590149:-1:exon
so has part: feature:589775-589844:-1:exon
so has part: feature:589198-589406:-1:exon
so has part: feature:588831-588983:-1:exon
so has part: feature:588555-588718:-1:exon
so has part: feature:588157-588381:-1:exon
so has part: feature:587931-588071:-1:exon
so has part: feature:587399-587483:-1:exon
so has part: feature:586883-587115:-1:exon
so has part: feature:586662-586794:-1:exon
so has part: feature:586262-586364:-1:exon
so has part: feature:585970-586189:-1:exon
so has part: feature:585720-585807:-1:exon
so has part: feature:585254-585466:-1:exon
so has part: feature:584989-585155:-1:exon
so has part: feature:584742-584843:-1:exon
so has part: feature:584262-584370:-1:exon
so has part: feature:583894-584007:-1:exon

XP_033375638.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:596369-596433:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595882-596038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595515-595592:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595252-595328:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595046-595113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594670-594783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:594080-594258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:593692-593779:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:593314-593477:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:593041-593128:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:592753-592916:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592432-592592:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592066-592190:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:591721-591884:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:591440-591530:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:591193-591360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:590933-591075:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:590689-590859:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:590305-590388:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:590078-590149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:589775-589844:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:589198-589406:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:588831-588983:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:588555-588718:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:588157-588381:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:587931-588071:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:587399-587483:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:586883-587115:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:586662-586794:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:586262-586364:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:585970-586189:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:585720-585807:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:585254-585466:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:584989-585155:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:584742-584843:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:584262-584370:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:583894-584007:-1:exon

TTC24
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 598629..601807
location: region:598629-601807:1
so has part: feature:598629-601807:1:exon
subclass of: SO_0000010

107214530
type: Gene
SIO_000068: ncbigene

position:598629:1
position: 598629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601807:1
position: 601807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598629-601807:1:exon

TTC24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TTC24
product: tetratricopeptide repeat domain 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015650014.2
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: join(598629..599418,599496..599708,599789..599917,600054..600175,600293..600409,600523..600593,600691..601002,601241..601807)
location: region:598629-601807:1
so has part: feature:598629-599418:1:exon
so has part: feature:599496-599708:1:exon
so has part: feature:599789-599917:1:exon
so has part: feature:600054-600175:1:exon
so has part: feature:600293-600409:1:exon
so has part: feature:600523-600593:1:exon
so has part: feature:600691-601002:1:exon
so has part: feature:601241-601807:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:598629-599418:1:exon

position:599418:1
position: 599418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:599496-599708:1:exon

position:599496:1
position: 599496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599708:1
position: 599708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:599789-599917:1:exon

position:599789:1
position: 599789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599917:1
position: 599917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:600054-600175:1:exon

position:600054:1
position: 600054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600175:1
position: 600175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:600293-600409:1:exon

position:600293:1
position: 600293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600409:1
position: 600409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:600523-600593:1:exon

position:600523:1
position: 600523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600593:1
position: 600593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:600691-601002:1:exon

position:600691:1
position: 600691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601002:1
position: 601002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:601241-601807:1:exon

position:601241:1
position: 601241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TTC24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TTC24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 24
translation: MDSEEAADLGVQPTSPTDPIAPSAPTSIPSAPTSCKKGRKKKKKAEAREAQEGGDEAAERVGAIQGITRAGHRALALGAGREAVGCFRKALLLSRDTASPQLHQACAFNLGAAYVETGKPKKGLGFLLQSQPLEAESRGHLGSLYFSVGAAHEGLQDFPKALERFEKVAGQAGAAVQAGGRAGTCVQMGCCYLGMREPARAARCFLAAARAFAAAESPEAAAVALSRASGSMLQSRRFRAAEIARVLAQCRSLCETIPDPALRGKLYNDIGLGYSQLHIFSLAAESFERALGLCGGEPERRQEAALLQNLGAAHNALRSFGSALGWHRRAAALHGALGNRRAQGQCFGNLAYACSQLGNHGAAAESYLHALQAFRDSGDLQGQWQACEGLGAACLHLGDPQKAIGHYQEALILLSHCRDSPRADHKRVVHKLTDAIQHRLRFSHLSYQGGWAPTLVLEPSQLRFCSTLPHASRTQLQGRKVGKAQAEDKLYMHTPGAHPRYSGKRVRTKHGIEPSRQFLMELRLWHGVIPVLACLSFLPGGTRVALTGDLTLEPCNPHGLLGTSGEDDNGPSSAPGYHSEPQANSKRTTSPLKAAKLPHTGLWLQKYHIQPEMRLSSEPRPQGVTTHSTGHQNCQVLHPRPPKRYVMPWGSGQRSGPEVWAPECPLKGVFLRGEMETPAGLGTPVSWNGHNPKPKVTRAGLLAPCSQHQNHSRWMGQQI
SIO_010081: TTC24
subclass of: SO_0000673
so part of: TTC24
location: join(598629..599418,599496..599708,599789..599917,600054..600175,600293..600409,600523..600593,600691..601002,601241..601646)
location: region:598629-601646:1
so has part: feature:598629-599418:1:exon
so has part: feature:599496-599708:1:exon
so has part: feature:599789-599917:1:exon
so has part: feature:600054-600175:1:exon
so has part: feature:600293-600409:1:exon
so has part: feature:600523-600593:1:exon
so has part: feature:600691-601002:1:exon
so has part: feature:601241-601646:1:exon

XP_015505500.1
type: Protein
SIO_000068: ncbiprotein

position:601646:1
position: 601646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598629-599418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599496-599708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599789-599917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:600054-600175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:600293-600409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:600523-600593:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:600691-601002:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:601241-601646:1:exon

NAXE
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 602952..604732
location: region:602952-604732:1
so has part: feature:602952-604732:1:exon
subclass of: SO_0000010

107214508
type: Gene
SIO_000068: ncbigene

position:602952:1
position: 602952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604732:1
position: 604732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602952-604732:1:exon

NAXE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NAXE
product: NAD(P)HX epimerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_015649995.3
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: join(602952..603179,603506..603616,603755..603868,603954..604101,604184..604732)
location: region:602952-604732:1
so has part: feature:602952-603179:1:exon
so has part: feature:603506-603616:1:exon
so has part: feature:603755-603868:1:exon
so has part: feature:603954-604101:1:exon
so has part: feature:604184-604732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:602952-603179:1:exon

position:603179:1
position: 603179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:603506-603616:1:exon

position:603506:1
position: 603506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603616:1
position: 603616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603755-603868:1:exon

position:603755:1
position: 603755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603868:1
position: 603868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:603954-604101:1:exon

position:603954:1
position: 603954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604101:1
position: 604101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:604184-604732:1:exon

position:604184:1
position: 604184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAXE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NAXE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NAD(P)H-hydrate epimerase
translation: MYTGAQLCVCVCKVEGVDWAWPGFGVPRGAISHPRQEEAQAIDQELFTEYKFSVDQLMELAGLSCATAIAKAYPPSSFTTSQPAVLVVCGPGNNGGDGLVCARHLKMFGYQPTVYYPKRPSKSLFEGLTTQCEKMDIPFLPEFPTEAAFIDELYGLVVDAIFGFSFKGAVREPFGSILSTLERVTVPIASIDIPSGWDVEKGKADGLQPDMLISLTAPKKAAMHFTGRYHFLGGRFVPPMLQEKYALNLPPYPGTDCVLQLT
SIO_010081: NAXE
subclass of: SO_0000673
so part of: NAXE
location: join(602967..603179,603506..603616,603755..603868,603954..604101,604184..604386)
location: region:602967-604386:1
so has part: feature:602967-603179:1:exon
so has part: feature:603506-603616:1:exon
so has part: feature:603755-603868:1:exon
so has part: feature:603954-604101:1:exon
so has part: feature:604184-604386:1:exon

XP_015505481.1
type: Protein
SIO_000068: ncbiprotein

position:602967:1
position: 602967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604386:1
position: 604386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:602967-603179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:603506-603616:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603755-603868:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603954-604101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:604184-604386:1:exon

GPATCH4
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(604679..607193)
location: region:604679-607193:-1
so has part: feature:604679-607193:-1:exon
subclass of: SO_0000010

107214531
type: Gene
SIO_000068: ncbigene

position:604679:-1
position: 604679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607193:-1
position: 607193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604679-607193:-1:exon

GPATCH4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GPATCH4
product: G-patch domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_015650015.2
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: complement(join(604679..605591,605719..605769,605887..605993,606112..606219,606442..606534,606617..606690,606974..607193))
location: region:604679-607193:-1
so has part: feature:606974-607193:-1:exon
so has part: feature:606617-606690:-1:exon
so has part: feature:606442-606534:-1:exon
so has part: feature:606112-606219:-1:exon
so has part: feature:605887-605993:-1:exon
so has part: feature:605719-605769:-1:exon
so has part: feature:604679-605591:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:606974-607193:-1:exon

position:606974:-1
position: 606974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:606617-606690:-1:exon

position:606617:-1
position: 606617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606690:-1
position: 606690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:606442-606534:-1:exon

position:606442:-1
position: 606442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606534:-1
position: 606534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:606112-606219:-1:exon

position:606112:-1
position: 606112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606219:-1
position: 606219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:605887-605993:-1:exon

position:605887:-1
position: 605887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605993:-1
position: 605993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:605719-605769:-1:exon

position:605719:-1
position: 605719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605769:-1
position: 605769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:604679-605591:-1:exon

position:605591:-1
position: 605591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPATCH4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GPATCH4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 4
translation: MRTAPSRRPRGDSAPASCGGAGTDRDTPEPHRDTLEPHRDTPGPAGPLRDPPDPPGRGMLFAETQLRRHGWRRGQGLGRREDGIAEAIRVKVKCDTAGVGHDAAEPFTFHWWDHVFNKAAANIAVEAGQDGISVKALCEQGGRISNKKPRKAGNSGSLLYGHFVKSATLTACGEESVTLPASSESSQEEEEEKLDLSSVRRLTDKELMQACGGRTAHKGARHGLTMSAKLARLEEQERAFLATYRQREQHQEPPENSQGKKKERKRSRDGANPEVPHSQEPNTEQEEVLEEEKVVKRKKKNRGPSREEELTGEEEVKRKKKKKKKMVMEPCGEEVSGEEGKVMKRRKKPELSTEEEVVEEEGKAAKRRKKKKKKKQEEEDKEEPAETDVPPQNTDESNLGHSPTKKRKKRRKREPE
SIO_010081: GPATCH4
subclass of: SO_0000673
so part of: GPATCH4
location: complement(join(604994..605591,605719..605769,605887..605993,606112..606219,606442..606534,606617..606690,606974..607193))
location: region:604994-607193:-1
so has part: feature:606974-607193:-1:exon
so has part: feature:606617-606690:-1:exon
so has part: feature:606442-606534:-1:exon
so has part: feature:606112-606219:-1:exon
so has part: feature:605887-605993:-1:exon
so has part: feature:605719-605769:-1:exon
so has part: feature:604994-605591:-1:exon

XP_015505501.1
type: Protein
SIO_000068: ncbiprotein

position:604994:-1
position: 604994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606974-607193:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606617-606690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606442-606534:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:606112-606219:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605887-605993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605719-605769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604994-605591:-1:exon

UBQLN4
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(610987..622908)
location: region:610987-622908:-1
so has part: feature:610987-622908:-1:exon
subclass of: SO_0000010

107214589
type: Gene
SIO_000068: ncbigene

position:610987:-1
position: 610987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622908:-1
position: 622908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610987-622908:-1:exon

UBQLN4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: UBQLN4
product: ubiquilin 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015650163.2
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: complement(join(610987..612190,612594..612771,613407..613522,614127..614210,614652..614791,615134..615359,616028..616186,617363..617625,617949..618154,620433..620584,621635..621714,622872..622908))
location: region:610987-622908:-1
so has part: feature:622872-622908:-1:exon
so has part: feature:621635-621714:-1:exon
so has part: feature:620433-620584:-1:exon
so has part: feature:617949-618154:-1:exon
so has part: feature:617363-617625:-1:exon
so has part: feature:616028-616186:-1:exon
so has part: feature:615134-615359:-1:exon
so has part: feature:614652-614791:-1:exon
so has part: feature:614127-614210:-1:exon
so has part: feature:613407-613522:-1:exon
so has part: feature:612594-612771:-1:exon
so has part: feature:610987-612190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622872-622908:-1:exon

position:622872:-1
position: 622872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621635-621714:-1:exon

position:621635:-1
position: 621635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621714:-1
position: 621714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:620433-620584:-1:exon

position:620433:-1
position: 620433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620584:-1
position: 620584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617949-618154:-1:exon

position:617949:-1
position: 617949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618154:-1
position: 618154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:617363-617625:-1:exon

position:617363:-1
position: 617363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617625:-1
position: 617625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:616028-616186:-1:exon

position:616028:-1
position: 616028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616186:-1
position: 616186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:615134-615359:-1:exon

position:615134:-1
position: 615134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615359:-1
position: 615359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:614652-614791:-1:exon

position:614652:-1
position: 614652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614791:-1
position: 614791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:614127-614210:-1:exon

position:614127:-1
position: 614127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614210:-1
position: 614210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:613407-613522:-1:exon

position:613407:-1
position: 613407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613522:-1
position: 613522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:612594-612771:-1:exon

position:612594:-1
position: 612594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612771:-1
position: 612771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:610987-612190:-1:exon

position:612190:-1
position: 612190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBQLN4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: UBQLN4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquilin-4
translation: MWPVKGEVAGGTGKETSALPRVRWRGALHLLGSESRLGLFKEEISRRFKAKQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKVQDSTSAASASSAASAPTATPSSPAAPSQPSTSSSAGPDAGSGSRRSSGSGTLGGPGDGGPNSAASILSGFGGITGLGNLGMGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSSLTGNSDSSSSQPLRTENREPLPNPWSPTPPASQSQAPSSEGSTGSATTQGTPTVSNPFGLNAASIGAGMFNSPEMQGLLQQISENPQLMQNMISAPYMRSMMQTLAQNPDFAAQIMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPDSLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGMPRMPPSSTGGSTIPENPVPSASTPASASPAGGGNPQQQLMQQMIQLLAGGSSQAQSPEVRFQQQLEQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
SIO_010081: UBQLN4
subclass of: SO_0000673
so part of: UBQLN4
location: complement(join(612038..612190,612594..612771,613407..613522,614127..614210,614652..614791,615134..615359,616028..616186,617363..617625,617949..618154,620433..620584,621635..621714,622872..622908))
location: region:612038-622908:-1
so has part: feature:622872-622908:-1:exon
so has part: feature:621635-621714:-1:exon
so has part: feature:620433-620584:-1:exon
so has part: feature:617949-618154:-1:exon
so has part: feature:617363-617625:-1:exon
so has part: feature:616028-616186:-1:exon
so has part: feature:615134-615359:-1:exon
so has part: feature:614652-614791:-1:exon
so has part: feature:614127-614210:-1:exon
so has part: feature:613407-613522:-1:exon
so has part: feature:612594-612771:-1:exon
so has part: feature:612038-612190:-1:exon

XP_015505649.2
type: Protein
SIO_000068: ncbiprotein

position:612038:-1
position: 612038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622872-622908:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621635-621714:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:620433-620584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617949-618154:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:617363-617625:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:616028-616186:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:615134-615359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:614652-614791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:614127-614210:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613407-613522:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:612594-612771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:612038-612190:-1:exon

LAMTOR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LAMTOR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 623069..624761
location: region:623069-624761:1
so has part: feature:623069-624761:1:exon
subclass of: SO_0000010

107214600
type: Gene
SIO_000068: ncbigene