Parus major isolate Abel chromosome 23, Parus_major1.1, whole genome shotgun sequence.
type: Entry
definition: Parus major isolate Abel chromosome 23, Parus_major1.1, whole genome shotgun sequence.
sequence version: NC_031791.1
sequence date: 2020-04-17
sequence: sequence
division: CON
label: NC_031791.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA312399
dblink: SAMN03083587
keyword: WGS
keyword: RefSeq
source: Parus major (Great Tit)
organism: Parus major
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus.
reference: 1
references: 26805030
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003732.1.\nOn Nov 14, 2016 this sequence version replaced NC_029291.1.\nAssembly name: Parus_major1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Animal Breeding and Genomics\nCentre, Wageningen University on 2016/06/30. The original\nwhole-genome shotgun project has the accession JRXK00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Animal Breeding and Genomics Centre,\n Wageningen University\nAssembly Date :: MAY-2013\nAssembly Method :: AllPaths v. April-2013\nAssembly Name :: Parus_major1.0.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 95.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Parus major Annotation Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6655392
topology: linear
so has quality: SO_0000987
location: 1..6655392
location: region:1-6655392:1
RO_0002162: 9157

NC_031791
type: RefSeq
SIO_000068: refseq

PRJNA312399
type: BioProject
SIO_000068: bioproject

SAMN03083587
type: BioSample
SIO_000068: biosample

1
title: Evolutionary signals of selection on cognition from the great tit genome and methylome
author: Laine, V.N.
author: Gossmann, T.I.
author: Schachtschneider, K.M.
author: Garroway, C.J.
author: Madsen, O.
author: Verhoeven, K.J.
author: de Jager, V.
author: Megens, H.J.
author: Warren, W.C.
author: Minx, P.
author: Crooijmans, R.P.
author: Corcoran, P.
author: Sheldon, B.C.
author: Slate, J.
author: Zeng, K.
author: van Oers, K.
author: Visser, M.E.
author: Groenen, M.A.
journal: Nat Commun 7, 10474 (2016)
pubmed: 26805030

26805030
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6655392:1
position: 6655392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6655392:1:source
so part of: sequence
organism: Parus major
mol type: genomic DNA
isolate: Abel
chromosome: 23
sex: male
tissue type: blood
dev stage: 4 year old

9157
type: Taxonomy
SIO_000068: taxonomy

LOC107214221
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1030..21657
location: region:1030-21657:1
so has part: feature:1030-21657:1:exon
subclass of: SO_0000010

107214221
type: Gene
SIO_000068: ncbigene

position:1030:1
position: 1030
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:21657:1
position: 21657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030-21657:1:exon

LOC107214221
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214221
product: mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033519589.1
SIO_010081: LOC107214221
subclass of: SO_0000673
so part of: LOC107214221
location: join(<1030..1278,3345..3425,5238..5332,9565..9688,12613..12706,15492..15607,15867..16086,17360..17532,19896..20011,20426..21657)
location: region:1030-21657:1
so has part: feature:1030-1278:1:exon
so has part: feature:3345-3425:1:exon
so has part: feature:5238-5332:1:exon
so has part: feature:9565-9688:1:exon
so has part: feature:12613-12706:1:exon
so has part: feature:15492-15607:1:exon
so has part: feature:15867-16086:1:exon
so has part: feature:17360-17532:1:exon
so has part: feature:19896-20011:1:exon
so has part: feature:20426-21657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1030-1278:1:exon

position:1278:1
position: 1278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3345-3425:1:exon

position:3345:1
position: 3345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3425:1
position: 3425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5238-5332:1:exon

position:5238:1
position: 5238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5332:1
position: 5332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9565-9688:1:exon

position:9565:1
position: 9565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9688:1
position: 9688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12613-12706:1:exon

position:12613:1
position: 12613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12706:1
position: 12706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15492-15607:1:exon

position:15492:1
position: 15492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15607:1
position: 15607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15867-16086:1:exon

position:15867:1
position: 15867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16086:1
position: 16086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17360-17532:1:exon

position:17360:1
position: 17360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17532:1
position: 17532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:19896-20011:1:exon

position:19896:1
position: 19896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20011:1
position: 20011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:20426-21657:1:exon

position:20426:1
position: 20426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214221
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
translation: NFEISHFGWQIPPRHPQHGQLCLAQPHRLTQSCAFIPLLCFCHTGGLRGATVIDALDTLYIMELEEEFQEAKQWVEKSFDLNVNGEASLFEVNIRYIGGLLATYYLTGEEVFKSKALELGEKLLPAFNTPTGIPRGVINLGSGMSWSWGWASAGSSILAEFGTLHLEFLHLSELSGNPVFAEKVMNIRRVLSRVEKPQGLYPNFLSPVTGSWVQHHVSIGGLGDSFYEYLIKSWLMSDKKDSEAKKMYDDALEAIEKHLVKKSAGGLTYIAEWRGGILDHKMGHLACFSGGMIALGAEHAAEERRQRHMELAAEITSTCHESYTRSDTKLGPEAFRFDAGSEAMATRLSERYYILRPEVVESYMYLWRLTHDPKYRHWGWEVVQALEKHCRVEAGFSGIRDVYTTTPSHDNMQQSFFLAETLKYLYLLFCEDDVLSLEDWVFNTEAHPLPINHTDFKAAVQP
SIO_010081: LOC107214221
subclass of: SO_0000673
so part of: LOC107214221
location: join(<1030..1278,3345..3425,5238..5332,9565..9688,12613..12706,15492..15607,15867..16086,17360..17532,19896..20011,20426..20546)
location: region:1030-20546:1
so has part: feature:1030-1278:1:exon
so has part: feature:3345-3425:1:exon
so has part: feature:5238-5332:1:exon
so has part: feature:9565-9688:1:exon
so has part: feature:12613-12706:1:exon
so has part: feature:15492-15607:1:exon
so has part: feature:15867-16086:1:exon
so has part: feature:17360-17532:1:exon
so has part: feature:19896-20011:1:exon
so has part: feature:20426-20546:1:exon

XP_033375480.1
type: Protein
SIO_000068: ncbiprotein

position:20546:1
position: 20546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030-1278:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3345-3425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5238-5332:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9565-9688:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12613-12706:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15492-15607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15867-16086:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17360-17532:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:19896-20011:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:20426-20546:1:exon

SELENON
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 25803..40220
location: region:25803-40220:1
so has part: feature:25803-40220:1:exon
subclass of: SO_0000010

107214227
type: Gene
SIO_000068: ncbigene

position:25803:1
position: 25803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40220:1
position: 40220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25803-40220:1:exon

SELENON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SELENON
product: selenoprotein N
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015649407.2
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: join(25803..25926,29425..29542,30539..30669,31119..31331,31998..32122,32772..32909,33669..33750,34599..34787,35695..35800,36500..36612,37235..37336,38217..40220)
location: region:25803-40220:1
so has part: feature:25803-25926:1:exon
so has part: feature:29425-29542:1:exon
so has part: feature:30539-30669:1:exon
so has part: feature:31119-31331:1:exon
so has part: feature:31998-32122:1:exon
so has part: feature:32772-32909:1:exon
so has part: feature:33669-33750:1:exon
so has part: feature:34599-34787:1:exon
so has part: feature:35695-35800:1:exon
so has part: feature:36500-36612:1:exon
so has part: feature:37235-37336:1:exon
so has part: feature:38217-40220:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:25803-25926:1:exon

position:25926:1
position: 25926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29425-29542:1:exon

position:29425:1
position: 29425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29542:1
position: 29542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:30539-30669:1:exon

position:30539:1
position: 30539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30669:1
position: 30669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:31119-31331:1:exon

position:31119:1
position: 31119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31331:1
position: 31331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:31998-32122:1:exon

position:31998:1
position: 31998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32122:1
position: 32122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:32772-32909:1:exon

position:32772:1
position: 32772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32909:1
position: 32909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:33669-33750:1:exon

position:33669:1
position: 33669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33750:1
position: 33750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:34599-34787:1:exon

position:34599:1
position: 34599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34787:1
position: 34787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:35695-35800:1:exon

position:35695:1
position: 35695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35800:1
position: 35800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:36500-36612:1:exon

position:36500:1
position: 36500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36612:1
position: 36612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:37235-37336:1:exon

position:37235:1
position: 37235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37336:1
position: 37336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:38217-40220:1:exon

position:38217:1
position: 38217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SELENON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SELENON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:35797..35799,aa:Sec)
product: selenoprotein N
translation: MAGPGPGAAPPRLALALALLAALLAVKYYRDTEAARRQELALKSLGNEGLFLFSSLDTNKDLYLSPEEFKPIAEKLTGVAPVSESEEEETPDPDGETLSIVAKFQPLVMETMTKSKDGFLGISHVALSGLRNWTAPAVPRSVLLARQFKAFLPPKNNLDLGDPWWIIPSELNIFTGYLSNNRFYPPPPKGKEVLIHRLLSMFHPRPFVKTRFAPQGAVACIQASSSFYYTIAFRIHAEFQLNEPPNFPFWFSPGQFTGYIVLSKDSSHVRDFRLFVPNNRSLNVDMEWLYGASESSNMEVDIGYLPQMELESTGPSIPTVIHDKNGNVLDSRDPSGEPIQFVFEEITWQQEIPWQEAAHRLEVAMYPFKKISYLPFTEAFERAQAEKKLVHSILLWGALDDQSCUGSGRTLRETVLESSPILALLNQSFISSWSLVKELEELQSNRENEFHSKLAELHLEKYNFPVEMIICLPNGTVIHHINANYFLDITSMKPEDVESSIFSFSSNFEDPSTATYLQFLKEGLQRAKPYLQP
SIO_010081: SELENON
subclass of: SO_0000673
so part of: SELENON
location: join(25813..25926,29425..29542,30539..30669,31119..31331,31998..32122,32772..32909,33669..33750,34599..34787,35695..35800,36500..36612,37235..37336,38217..38387)
location: region:25813-38387:1
so has part: feature:25813-25926:1:exon
so has part: feature:29425-29542:1:exon
so has part: feature:30539-30669:1:exon
so has part: feature:31119-31331:1:exon
so has part: feature:31998-32122:1:exon
so has part: feature:32772-32909:1:exon
so has part: feature:33669-33750:1:exon
so has part: feature:34599-34787:1:exon
so has part: feature:35695-35800:1:exon
so has part: feature:36500-36612:1:exon
so has part: feature:37235-37336:1:exon
so has part: feature:38217-38387:1:exon

XP_015504893.1
type: Protein
SIO_000068: ncbiprotein

position:25813:1
position: 25813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38387:1
position: 38387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25813-25926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29425-29542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30539-30669:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:31119-31331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:31998-32122:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32772-32909:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33669-33750:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:34599-34787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:35695-35800:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:36500-36612:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:37235-37336:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:38217-38387:1:exon

MTFR1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 40710..47109
location: region:40710-47109:1
so has part: feature:40710-47109:1:exon
subclass of: SO_0000010

107214228
type: Gene
SIO_000068: ncbigene

position:40710:1
position: 40710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47109:1
position: 47109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40710-47109:1:exon

MTFR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MTFR1L
product: mitochondrial fission regulator 1 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_015649411.1
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: join(40710..40799,40879..40944,41862..41966,42609..42718,43184..43395,43604..43931,46161..47109)
location: region:40710-47109:1
so has part: feature:40710-40799:1:exon
so has part: feature:40879-40944:1:exon
so has part: feature:41862-41966:1:exon
so has part: feature:42609-42718:1:exon
so has part: feature:43184-43395:1:exon
so has part: feature:43604-43931:1:exon
so has part: feature:46161-47109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40710-40799:1:exon

position:40799:1
position: 40799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40879-40944:1:exon

position:40879:1
position: 40879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40944:1
position: 40944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:41862-41966:1:exon

position:41862:1
position: 41862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41966:1
position: 41966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:42609-42718:1:exon

position:42609:1
position: 42609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42718:1
position: 42718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:43184-43395:1:exon

position:43184:1
position: 43184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43395:1
position: 43395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:43604-43931:1:exon

position:43604:1
position: 43604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43931:1
position: 43931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:46161-47109:1:exon

position:46161:1
position: 46161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTFR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MTFR1L
product: mitochondrial fission regulator 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015649409.3
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: join(40716..40799,41862..41966,42609..42718,43184..43395,43604..43931,46161..46286,46373..47109)
location: region:40716-47109:1
so has part: feature:40716-40799:1:exon
so has part: feature:41862-41966:1:exon
so has part: feature:42609-42718:1:exon
so has part: feature:43184-43395:1:exon
so has part: feature:43604-43931:1:exon
so has part: feature:46161-46286:1:exon
so has part: feature:46373-47109:1:exon

position:40716:1
position: 40716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40716-40799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41862-41966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42609-42718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43184-43395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43604-43931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46161-46286:1:exon

position:46286:1
position: 46286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:46373-47109:1:exon

position:46373:1
position: 46373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTFR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MTFR1L
product: mitochondrial fission regulator 1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_015649410.3
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: join(40716..40799,41862..41966,42609..42718,43184..43395,43604..43931,46161..46286,46505..47109)
location: region:40716-47109:1
so has part: feature:40716-40799:1:exon
so has part: feature:41862-41966:1:exon
so has part: feature:42609-42718:1:exon
so has part: feature:43184-43395:1:exon
so has part: feature:43604-43931:1:exon
so has part: feature:46161-46286:1:exon
so has part: feature:46505-47109:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:40716-40799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41862-41966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42609-42718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43184-43395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43604-43931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46161-46286:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46505-47109:1:exon

position:46505:1
position: 46505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MTFR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MTFR1L
product: mitochondrial fission regulator 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015649408.3
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: join(40719..40799,41862..41966,42609..42718,43184..43395,43604..43931,46161..47109)
location: region:40719-47109:1
so has part: feature:40719-40799:1:exon
so has part: feature:41862-41966:1:exon
so has part: feature:42609-42718:1:exon
so has part: feature:43184-43395:1:exon
so has part: feature:43604-43931:1:exon
so has part: feature:46161-47109:1:exon

position:40719:1
position: 40719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40719-40799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41862-41966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42609-42718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43184-43395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43604-43931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46161-47109:1:exon

MTFR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission regulator 1-like isoform X1
translation: MAAEGPLPALAAGPSCAAAPQTIPIWQNKPHGSARSVVRMIGSNLPLKPCPRATFEVLPSVSDLYLGDVPPVPTLADIVWIAADDEETYARVRSDTRPLKHKWKPSPFTVIQRNASVPNLRKQEEKLLALKKPGLPALSRTTELQDELSHLRSQIAKIVAAESASAQLTPDLLSPGSSNASSPVHCFGPSFQSTTSFVISDITEEEAELESPELPSVAELPSVAELCSASESCRPEPKDPDEEDSVSLSKASSFADMMGILKDIHRMKQSKDLNRPSMKEEDPAVLIAEVLRRKFALKDEDLALKEK
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: join(40737..40799,41862..41966,42609..42718,43184..43395,43604..43931,46161..46266)
location: region:40737-46266:1
so has part: feature:40737-40799:1:exon
so has part: feature:41862-41966:1:exon
so has part: feature:42609-42718:1:exon
so has part: feature:43184-43395:1:exon
so has part: feature:43604-43931:1:exon
so has part: feature:46161-46266:1:exon

XP_015504894.1
type: Protein
SIO_000068: ncbiprotein

position:40737:1
position: 40737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46266:1
position: 46266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40737-40799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41862-41966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42609-42718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43184-43395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43604-43931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46161-46266:1:exon

MTFR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission regulator 1-like isoform X1
translation: MAAEGPLPALAAGPSCAAAPQTIPIWQNKPHGSARSVVRMIGSNLPLKPCPRATFEVLPSVSDLYLGDVPPVPTLADIVWIAADDEETYARVRSDTRPLKHKWKPSPFTVIQRNASVPNLRKQEEKLLALKKPGLPALSRTTELQDELSHLRSQIAKIVAAESASAQLTPDLLSPGSSNASSPVHCFGPSFQSTTSFVISDITEEEAELESPELPSVAELPSVAELCSASESCRPEPKDPDEEDSVSLSKASSFADMMGILKDIHRMKQSKDLNRPSMKEEDPAVLIAEVLRRKFALKDEDLALKEK
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: join(40737..40799,41862..41966,42609..42718,43184..43395,43604..43931,46161..46266)
location: region:40737-46266:1
so has part: feature:40737-40799:1:exon
so has part: feature:41862-41966:1:exon
so has part: feature:42609-42718:1:exon
so has part: feature:43184-43395:1:exon
so has part: feature:43604-43931:1:exon
so has part: feature:46161-46266:1:exon

XP_015504895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40737-40799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41862-41966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42609-42718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43184-43395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43604-43931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46161-46266:1:exon

MTFR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission regulator 1-like isoform X1
translation: MAAEGPLPALAAGPSCAAAPQTIPIWQNKPHGSARSVVRMIGSNLPLKPCPRATFEVLPSVSDLYLGDVPPVPTLADIVWIAADDEETYARVRSDTRPLKHKWKPSPFTVIQRNASVPNLRKQEEKLLALKKPGLPALSRTTELQDELSHLRSQIAKIVAAESASAQLTPDLLSPGSSNASSPVHCFGPSFQSTTSFVISDITEEEAELESPELPSVAELPSVAELCSASESCRPEPKDPDEEDSVSLSKASSFADMMGILKDIHRMKQSKDLNRPSMKEEDPAVLIAEVLRRKFALKDEDLALKEK
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: join(40737..40799,41862..41966,42609..42718,43184..43395,43604..43931,46161..46266)
location: region:40737-46266:1
so has part: feature:40737-40799:1:exon
so has part: feature:41862-41966:1:exon
so has part: feature:42609-42718:1:exon
so has part: feature:43184-43395:1:exon
so has part: feature:43604-43931:1:exon
so has part: feature:46161-46266:1:exon

XP_015504896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40737-40799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41862-41966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42609-42718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43184-43395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43604-43931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46161-46266:1:exon

MTFR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MTFR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial fission regulator 1-like isoform X2
translation: MDAEATIPIWQNKPHGSARSVVRMIGSNLPLKPCPRATFEVLPSVSDLYLGDVPPVPTLADIVWIAADDEETYARVRSDTRPLKHKWKPSPFTVIQRNASVPNLRKQEEKLLALKKPGLPALSRTTELQDELSHLRSQIAKIVAAESASAQLTPDLLSPGSSNASSPVHCFGPSFQSTTSFVISDITEEEAELESPELPSVAELPSVAELCSASESCRPEPKDPDEEDSVSLSKASSFADMMGILKDIHRMKQSKDLNRPSMKEEDPAVLIAEVLRRKFALKDEDLALKEK
SIO_010081: MTFR1L
subclass of: SO_0000673
so part of: MTFR1L
location: join(40930..40944,41862..41966,42609..42718,43184..43395,43604..43931,46161..46266)
location: region:40930-46266:1
so has part: feature:40930-40944:1:exon
so has part: feature:41862-41966:1:exon
so has part: feature:42609-42718:1:exon
so has part: feature:43184-43395:1:exon
so has part: feature:43604-43931:1:exon
so has part: feature:46161-46266:1:exon

XP_015504897.1
type: Protein
SIO_000068: ncbiprotein

position:40930:1
position: 40930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40930-40944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:41862-41966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42609-42718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:43184-43395:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43604-43931:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:46161-46266:1:exon

PAQR7
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PAQR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(47504..52729)
location: region:47504-52729:-1
so has part: feature:47504-52729:-1:exon
subclass of: SO_0000010

107214012
type: Gene
SIO_000068: ncbigene

position:47504:-1
position: 47504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52729:-1
position: 52729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47504-52729:-1:exon

PAQR7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PAQR7
product: progestin and adipoQ receptor family member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015649007.2
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(join(47504..48239,48689..48773,49623..50999,52076..52729))
location: region:47504-52729:-1
so has part: feature:52076-52729:-1:exon
so has part: feature:49623-50999:-1:exon
so has part: feature:48689-48773:-1:exon
so has part: feature:47504-48239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52076-52729:-1:exon

position:52076:-1
position: 52076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49623-50999:-1:exon

position:49623:-1
position: 49623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50999:-1
position: 50999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48689-48773:-1:exon

position:48689:-1
position: 48689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48773:-1
position: 48773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:47504-48239:-1:exon

position:48239:-1
position: 48239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAQR7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PAQR7
product: progestin and adipoQ receptor family member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015649008.2
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(join(47504..48239,48689..48773,49623..50999,52076..52129,52220..52728))
location: region:47504-52728:-1
so has part: feature:52220-52728:-1:exon
so has part: feature:52076-52129:-1:exon
so has part: feature:49623-50999:-1:exon
so has part: feature:48689-48773:-1:exon
so has part: feature:47504-48239:-1:exon

position:52728:-1
position: 52728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52220-52728:-1:exon

position:52220:-1
position: 52220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52076-52129:-1:exon

position:52129:-1
position: 52129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49623-50999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48689-48773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47504-48239:-1:exon

PAQR7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PAQR7
product: progestin and adipoQ receptor family member 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015649014.2
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(join(47504..48239,48689..48773,49623..50999,52076..52129,52621..52722))
location: region:47504-52722:-1
so has part: feature:52621-52722:-1:exon
so has part: feature:52076-52129:-1:exon
so has part: feature:49623-50999:-1:exon
so has part: feature:48689-48773:-1:exon
so has part: feature:47504-48239:-1:exon

position:52722:-1
position: 52722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52621-52722:-1:exon

position:52621:-1
position: 52621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:52076-52129:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49623-50999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48689-48773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47504-48239:-1:exon

PAQR7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PAQR7
product: progestin and adipoQ receptor family member 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015649011.2
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(join(47504..48239,48689..48773,49623..50999,51540..52164))
location: region:47504-52164:-1
so has part: feature:51540-52164:-1:exon
so has part: feature:49623-50999:-1:exon
so has part: feature:48689-48773:-1:exon
so has part: feature:47504-48239:-1:exon

position:52164:-1
position: 52164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51540-52164:-1:exon

position:51540:-1
position: 51540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49623-50999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48689-48773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47504-48239:-1:exon

PAQR7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PAQR7
product: progestin and adipoQ receptor family member 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015649010.2
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(join(47504..48239,48689..48773,49623..51023,51540..52164))
location: region:47504-52164:-1
so has part: feature:51540-52164:-1:exon
so has part: feature:49623-51023:-1:exon
so has part: feature:48689-48773:-1:exon
so has part: feature:47504-48239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51540-52164:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49623-51023:-1:exon

position:51023:-1
position: 51023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48689-48773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47504-48239:-1:exon

PAQR7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PAQR7
product: progestin and adipoQ receptor family member 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033519484.1
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(join(47504..48239,48689..48773,49623..50999,51332..52164))
location: region:47504-52164:-1
so has part: feature:51332-52164:-1:exon
so has part: feature:49623-50999:-1:exon
so has part: feature:48689-48773:-1:exon
so has part: feature:47504-48239:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:51332-52164:-1:exon

position:51332:-1
position: 51332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49623-50999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48689-48773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:47504-48239:-1:exon

PAQR7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PAQR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor alpha isoform X2
translation: MLLGRGNARQRSRQLVGRWRVLFGVRGFPGCAPFITERCSRLGSWEELGKLNPAPTSFGGAEEFLSWEPELSPLPCPGTEGTLLSEDAEFGLIMATVVTEKLSRLFINVRQLPQLLGPLSLGTVSSAEVPPVFWKPYIHGGYRPVRQTWRYYFSTLFQQHNEAINVWSHLAAALGLLLRLQHLWQRVDFGQDAHARPLLIILAAAITYLTFSSLAHLLQAKSEFWHYGFFFMDYVGVAVYQYGSALGHFYYAIEPGWHRRVQGFFLPLAAALAWLSCAGSCYAKFRFHPSCPLPGRLCQELPSGLAYLLDISPVIHRICTAARPDPALLYHKCQVLFFLIGAFFFSHPYPEKWFPGKCHFVGQSHQIFHVFLVLCTLAQIEAVVLDYESRREIYSSLQRGLAHDFSALFLVTVTCSVLTATYMAQRVKNKLGLKEE
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(join(49929..50999,52076..52129,52220..52405))
location: region:49929-52405:-1
so has part: feature:52220-52405:-1:exon
so has part: feature:52076-52129:-1:exon
so has part: feature:49929-50999:-1:exon

XP_015504494.1
type: Protein
SIO_000068: ncbiprotein

position:49929:-1
position: 49929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52405:-1
position: 52405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52220-52405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:52076-52129:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49929-50999:-1:exon

PAQR7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PAQR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor alpha isoform X1
translation: MLLGRGNARQRSRQLVGRWRVLFGVRGFPGCAPFITERCSRLGSWEELGKLNPAPTSFGGAEVNTAPFPASCLAAPRCFRHHHPLHHPPFPQEFLSWEPELSPLPCPGTEGTLLSEDAEFGLIMATVVTEKLSRLFINVRQLPQLLGPLSLGTVSSAEVPPVFWKPYIHGGYRPVRQTWRYYFSTLFQQHNEAINVWSHLAAALGLLLRLQHLWQRVDFGQDAHARPLLIILAAAITYLTFSSLAHLLQAKSEFWHYGFFFMDYVGVAVYQYGSALGHFYYAIEPGWHRRVQGFFLPLAAALAWLSCAGSCYAKFRFHPSCPLPGRLCQELPSGLAYLLDISPVIHRICTAARPDPALLYHKCQVLFFLIGAFFFSHPYPEKWFPGKCHFVGQSHQIFHVFLVLCTLAQIEAVVLDYESRREIYSSLQRGLAHDFSALFLVTVTCSVLTATYMAQRVKNKLGLKEE
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(join(49929..50999,52076..52405))
location: region:49929-52405:-1
so has part: feature:52076-52405:-1:exon
so has part: feature:49929-50999:-1:exon

XP_015504493.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:52076-52405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49929-50999:-1:exon

PAQR7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PAQR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor alpha isoform X3
translation: MATVVTEKLSRLFINVRQLPQLLGPLSLGTVSSAEVPPVFWKPYIHGGYRPVRQTWRYYFSTLFQQHNEAINVWSHLAAALGLLLRLQHLWQRVDFGQDAHARPLLIILAAAITYLTFSSLAHLLQAKSEFWHYGFFFMDYVGVAVYQYGSALGHFYYAIEPGWHRRVQGFFLPLAAALAWLSCAGSCYAKFRFHPSCPLPGRLCQELPSGLAYLLDISPVIHRICTAARPDPALLYHKCQVLFFLIGAFFFSHPYPEKWFPGKCHFVGQSHQIFHVFLVLCTLAQIEAVVLDYESRREIYSSLQRGLAHDFSALFLVTVTCSVLTATYMAQRVKNKLGLKEE
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(49929..50960)
location: region:49929-50960:-1
so has part: feature:49929-50960:-1:exon

XP_033375375.1
type: Protein
SIO_000068: ncbiprotein

position:50960:-1
position: 50960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49929-50960:-1:exon

PAQR7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PAQR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor alpha isoform X3
translation: MATVVTEKLSRLFINVRQLPQLLGPLSLGTVSSAEVPPVFWKPYIHGGYRPVRQTWRYYFSTLFQQHNEAINVWSHLAAALGLLLRLQHLWQRVDFGQDAHARPLLIILAAAITYLTFSSLAHLLQAKSEFWHYGFFFMDYVGVAVYQYGSALGHFYYAIEPGWHRRVQGFFLPLAAALAWLSCAGSCYAKFRFHPSCPLPGRLCQELPSGLAYLLDISPVIHRICTAARPDPALLYHKCQVLFFLIGAFFFSHPYPEKWFPGKCHFVGQSHQIFHVFLVLCTLAQIEAVVLDYESRREIYSSLQRGLAHDFSALFLVTVTCSVLTATYMAQRVKNKLGLKEE
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(49929..50960)
location: region:49929-50960:-1
so has part: feature:49929-50960:-1:exon

XP_015504496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49929-50960:-1:exon

PAQR7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PAQR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor alpha isoform X3
translation: MATVVTEKLSRLFINVRQLPQLLGPLSLGTVSSAEVPPVFWKPYIHGGYRPVRQTWRYYFSTLFQQHNEAINVWSHLAAALGLLLRLQHLWQRVDFGQDAHARPLLIILAAAITYLTFSSLAHLLQAKSEFWHYGFFFMDYVGVAVYQYGSALGHFYYAIEPGWHRRVQGFFLPLAAALAWLSCAGSCYAKFRFHPSCPLPGRLCQELPSGLAYLLDISPVIHRICTAARPDPALLYHKCQVLFFLIGAFFFSHPYPEKWFPGKCHFVGQSHQIFHVFLVLCTLAQIEAVVLDYESRREIYSSLQRGLAHDFSALFLVTVTCSVLTATYMAQRVKNKLGLKEE
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(49929..50960)
location: region:49929-50960:-1
so has part: feature:49929-50960:-1:exon

XP_015504497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49929-50960:-1:exon

PAQR7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PAQR7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor alpha isoform X3
translation: MATVVTEKLSRLFINVRQLPQLLGPLSLGTVSSAEVPPVFWKPYIHGGYRPVRQTWRYYFSTLFQQHNEAINVWSHLAAALGLLLRLQHLWQRVDFGQDAHARPLLIILAAAITYLTFSSLAHLLQAKSEFWHYGFFFMDYVGVAVYQYGSALGHFYYAIEPGWHRRVQGFFLPLAAALAWLSCAGSCYAKFRFHPSCPLPGRLCQELPSGLAYLLDISPVIHRICTAARPDPALLYHKCQVLFFLIGAFFFSHPYPEKWFPGKCHFVGQSHQIFHVFLVLCTLAQIEAVVLDYESRREIYSSLQRGLAHDFSALFLVTVTCSVLTATYMAQRVKNKLGLKEE
SIO_010081: PAQR7
subclass of: SO_0000673
so part of: PAQR7
location: complement(49929..50960)
location: region:49929-50960:-1
so has part: feature:49929-50960:-1:exon

XP_015504500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49929-50960:-1:exon

LOC117245422
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117245422
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 52791..57132
location: region:52791-57132:1
so has part: feature:52791-57132:1:exon
subclass of: SO_0000011

117245422
type: Gene
SIO_000068: ncbigene

position:52791:1
position: 52791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57132:1
position: 57132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52791-57132:1:exon

LOC117245422
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC117245422
product: uncharacterized LOC117245422
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004500105.1
SIO_010081: LOC117245422
subclass of: SO_0000673
so part of: LOC117245422
location: join(52791..53390,56079..57132)
location: region:52791-57132:1
so has part: feature:52791-53390:1:exon
so has part: feature:56079-57132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52791-53390:1:exon

position:53390:1
position: 53390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:56079-57132:1:exon

position:56079:1
position: 56079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STMN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: STMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(54724..60480)
location: region:54724-60480:-1
so has part: feature:54724-60480:-1:exon
subclass of: SO_0000010

107214235
type: Gene
SIO_000068: ncbigene

position:54724:-1
position: 54724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60480:-1
position: 60480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54724-60480:-1:exon

STMN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: STMN1
product: stathmin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 mRNAs, 132 ESTs, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015649424.1
SIO_010081: STMN1
subclass of: SO_0000673
so part of: STMN1
location: complement(join(54724..55234,55502..55693,56383..56555,57166..57236,60419..60480))
location: region:54724-60480:-1
so has part: feature:60419-60480:-1:exon
so has part: feature:57166-57236:-1:exon
so has part: feature:56383-56555:-1:exon
so has part: feature:55502-55693:-1:exon
so has part: feature:54724-55234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60419-60480:-1:exon

position:60419:-1
position: 60419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57166-57236:-1:exon

position:57166:-1
position: 57166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57236:-1
position: 57236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:56383-56555:-1:exon

position:56383:-1
position: 56383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56555:-1
position: 56555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:55502-55693:-1:exon

position:55502:-1
position: 55502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55693:-1
position: 55693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:54724-55234:-1:exon

position:55234:-1
position: 55234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STMN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: STMN1
product: stathmin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 mRNAs, 130 ESTs, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_015649425.3
SIO_010081: STMN1
subclass of: SO_0000673
so part of: STMN1
location: complement(join(54724..55234,55502..55693,56383..56555,57166..57238,57716..57719,58707..58762))
location: region:54724-58762:-1
so has part: feature:58707-58762:-1:exon
so has part: feature:57716-57719:-1:exon
so has part: feature:57166-57238:-1:exon
so has part: feature:56383-56555:-1:exon
so has part: feature:55502-55693:-1:exon
so has part: feature:54724-55234:-1:exon

position:58762:-1
position: 58762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58707-58762:-1:exon

position:58707:-1
position: 58707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57716-57719:-1:exon

position:57716:-1
position: 57716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57719:-1
position: 57719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:57166-57238:-1:exon

position:57238:-1
position: 57238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:56383-56555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:55502-55693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:54724-55234:-1:exon

STMN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: STMN1
product: stathmin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 mRNAs, 136 ESTs, 47 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015649426.1
SIO_010081: STMN1
subclass of: SO_0000673
so part of: STMN1
location: complement(join(54724..55234,55502..55693,56383..56555,57166..57236,57577..57719))
location: region:54724-57719:-1
so has part: feature:57577-57719:-1:exon
so has part: feature:57166-57236:-1:exon
so has part: feature:56383-56555:-1:exon
so has part: feature:55502-55693:-1:exon
so has part: feature:54724-55234:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:57577-57719:-1:exon

position:57577:-1
position: 57577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57166-57236:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:56383-56555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55502-55693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:54724-55234:-1:exon

STMN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: STMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stathmin
translation: MATSDIQVKELEKRASGQAFELILSPRSKEAVPEFPLSPPKKKDVSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKDKHVEEVRKNKEGKDPGEAETD
SIO_010081: STMN1
subclass of: SO_0000673
so part of: STMN1
location: complement(join(55166..55234,55502..55693,56383..56555,57166..57178))
location: region:55166-57178:-1
so has part: feature:57166-57178:-1:exon
so has part: feature:56383-56555:-1:exon
so has part: feature:55502-55693:-1:exon
so has part: feature:55166-55234:-1:exon

XP_015504910.1
type: Protein
SIO_000068: ncbiprotein

position:55166:-1
position: 55166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57178:-1
position: 57178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57166-57178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56383-56555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55502-55693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55166-55234:-1:exon

STMN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: STMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stathmin
translation: MATSDIQVKELEKRASGQAFELILSPRSKEAVPEFPLSPPKKKDVSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKDKHVEEVRKNKEGKDPGEAETD
SIO_010081: STMN1
subclass of: SO_0000673
so part of: STMN1
location: complement(join(55166..55234,55502..55693,56383..56555,57166..57178))
location: region:55166-57178:-1
so has part: feature:57166-57178:-1:exon
so has part: feature:56383-56555:-1:exon
so has part: feature:55502-55693:-1:exon
so has part: feature:55166-55234:-1:exon

XP_015504911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57166-57178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56383-56555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55502-55693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55166-55234:-1:exon

STMN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: STMN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stathmin
translation: MATSDIQVKELEKRASGQAFELILSPRSKEAVPEFPLSPPKKKDVSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKLTHKMEANKENREAQMAAKLERLREKDKHVEEVRKNKEGKDPGEAETD
SIO_010081: STMN1
subclass of: SO_0000673
so part of: STMN1
location: complement(join(55166..55234,55502..55693,56383..56555,57166..57178))
location: region:55166-57178:-1
so has part: feature:57166-57178:-1:exon
so has part: feature:56383-56555:-1:exon
so has part: feature:55502-55693:-1:exon
so has part: feature:55166-55234:-1:exon

XP_015504912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:57166-57178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:56383-56555:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:55502-55693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:55166-55234:-1:exon

PAFAH2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PAFAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(69720..74054)
location: region:69720-74054:-1
so has part: feature:69720-74054:-1:exon
subclass of: SO_0000010

107214236
type: Gene
SIO_000068: ncbigene

position:69720:-1
position: 69720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74054:-1
position: 74054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69720-74054:-1:exon

PAFAH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PAFAH2
product: platelet activating factor acetylhydrolase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_033519485.1
SIO_010081: PAFAH2
subclass of: SO_0000673
so part of: PAFAH2
location: complement(join(69720..70021,70868..71016,71129..71299,71394..71485,71747..71860,73027..73135,73232..73300,73399..73495,73649..73796,73934..74054))
location: region:69720-74054:-1
so has part: feature:73934-74054:-1:exon
so has part: feature:73649-73796:-1:exon
so has part: feature:73399-73495:-1:exon
so has part: feature:73232-73300:-1:exon
so has part: feature:73027-73135:-1:exon
so has part: feature:71747-71860:-1:exon
so has part: feature:71394-71485:-1:exon
so has part: feature:71129-71299:-1:exon
so has part: feature:70868-71016:-1:exon
so has part: feature:69720-70021:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73934-74054:-1:exon

position:73934:-1
position: 73934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73649-73796:-1:exon

position:73649:-1
position: 73649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73796:-1
position: 73796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:73399-73495:-1:exon

position:73399:-1
position: 73399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73495:-1
position: 73495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:73232-73300:-1:exon

position:73232:-1
position: 73232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73300:-1
position: 73300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:73027-73135:-1:exon

position:73027:-1
position: 73027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73135:-1
position: 73135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:71747-71860:-1:exon

position:71747:-1
position: 71747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71860:-1
position: 71860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:71394-71485:-1:exon

position:71394:-1
position: 71394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71485:-1
position: 71485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:71129-71299:-1:exon

position:71129:-1
position: 71129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71299:-1
position: 71299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:70868-71016:-1:exon

position:70868:-1
position: 70868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71016:-1
position: 71016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:69720-70021:-1:exon

position:70021:-1
position: 70021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAFAH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PAFAH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet-activating factor acetylhydrolase 2, cytoplasmic
translation: MGGMLALPPGQGPHQVGCTDVMVGSTLQGLFLRLFYPCLPRPGATEPLWIPRPEYCRGLADAILGHRWCSALLSIAIGSCKVPLSWNAPLKPRSSGYPLIIFSHGLGAFRTLYSSICTELASRGFVVAALEHRDRSAATTYWCTAGTEEWIPFQRVPQGQKEFYFRNKQVHRRAQECVRALRLFQGIAGGRSVPNILHQDWDLSVLKDNLDLSKVAVMGHSFGGVTAVLALVKEPSLRCAVALDAWMFPLENLLYPEVPKPVLFINTEKFQTPESFAKMKRLSSRNSQTRIVTVLGTTHEDQTDFAFLPGKLLSCIFGRRGSLDPHKALAITSRAALAFLQRHLXLQEEFGQWDELLEGVGDSVVPEVPFSRSHL
SIO_010081: PAFAH2
subclass of: SO_0000673
so part of: PAFAH2
location: complement(join(69927..70021,70868..71016,71129..71299,71394..71485,71747..71860,73027..73135,73232..73300,73399..73495,73649..73796,73934..74017))
location: region:69927-74017:-1
so has part: feature:73934-74017:-1:exon
so has part: feature:73649-73796:-1:exon
so has part: feature:73399-73495:-1:exon
so has part: feature:73232-73300:-1:exon
so has part: feature:73027-73135:-1:exon
so has part: feature:71747-71860:-1:exon
so has part: feature:71394-71485:-1:exon
so has part: feature:71129-71299:-1:exon
so has part: feature:70868-71016:-1:exon
so has part: feature:69927-70021:-1:exon

XP_033375376.1
type: Protein
SIO_000068: ncbiprotein

position:69927:-1
position: 69927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74017:-1
position: 74017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73934-74017:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73649-73796:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:73399-73495:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73232-73300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73027-73135:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71747-71860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71394-71485:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:71129-71299:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70868-71016:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:69927-70021:-1:exon

EXTL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: EXTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 78364..85096
location: region:78364-85096:1
so has part: feature:78364-85096:1:exon
subclass of: SO_0000010

107213996
type: Gene
SIO_000068: ncbigene

position:78364:1
position: 78364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85096:1
position: 85096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78364-85096:1:exon

EXTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: EXTL1
product: exostosin like glycosyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_015648980.2
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: join(78364..78394,78582..79826,82436..82529,82611..82718,83105..83224,83308..83440,83527..83645,83935..84030,84118..84204,84308..84468,84543..85096)
location: region:78364-85096:1
so has part: feature:78364-78394:1:exon
so has part: feature:78582-79826:1:exon
so has part: feature:82436-82529:1:exon
so has part: feature:82611-82718:1:exon
so has part: feature:83105-83224:1:exon
so has part: feature:83308-83440:1:exon
so has part: feature:83527-83645:1:exon
so has part: feature:83935-84030:1:exon
so has part: feature:84118-84204:1:exon
so has part: feature:84308-84468:1:exon
so has part: feature:84543-85096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78364-78394:1:exon

position:78394:1
position: 78394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78582-79826:1:exon

position:78582:1
position: 78582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79826:1
position: 79826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82436-82529:1:exon

position:82436:1
position: 82436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82529:1
position: 82529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:82611-82718:1:exon

position:82611:1
position: 82611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82718:1
position: 82718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:83105-83224:1:exon

position:83105:1
position: 83105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83224:1
position: 83224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:83308-83440:1:exon

position:83308:1
position: 83308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83440:1
position: 83440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:83527-83645:1:exon

position:83527:1
position: 83527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:83645:1
position: 83645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:83935-84030:1:exon

position:83935:1
position: 83935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84030:1
position: 84030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:84118-84204:1:exon

position:84118:1
position: 84118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84204:1
position: 84204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:84308-84468:1:exon

position:84308:1
position: 84308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84468:1
position: 84468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:84543-85096:1:exon

position:84543:1
position: 84543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EXTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: EXTL1
product: exostosin like glycosyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015648981.2
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: join(78364..78394,78582..79826,82436..82529,82611..82718,83105..83224,83308..83440,83527..83645,83935..84030,84145..84204,84308..84468,84543..85096)
location: region:78364-85096:1
so has part: feature:78364-78394:1:exon
so has part: feature:78582-79826:1:exon
so has part: feature:82436-82529:1:exon
so has part: feature:82611-82718:1:exon
so has part: feature:83105-83224:1:exon
so has part: feature:83308-83440:1:exon
so has part: feature:83527-83645:1:exon
so has part: feature:83935-84030:1:exon
so has part: feature:84145-84204:1:exon
so has part: feature:84308-84468:1:exon
so has part: feature:84543-85096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78364-78394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78582-79826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82436-82529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82611-82718:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83105-83224:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83308-83440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83527-83645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83935-84030:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84145-84204:1:exon

position:84145:1
position: 84145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:84308-84468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84543-85096:1:exon

EXTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: EXTL1
product: exostosin like glycosyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015648983.2
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: join(78364..78394,78582..79826,82436..82529,82611..82718,83105..83224,83437..83440,83527..83645,83935..84030,84118..84204,84308..84468,84543..85096)
location: region:78364-85096:1
so has part: feature:78364-78394:1:exon
so has part: feature:78582-79826:1:exon
so has part: feature:82436-82529:1:exon
so has part: feature:82611-82718:1:exon
so has part: feature:83105-83224:1:exon
so has part: feature:83437-83440:1:exon
so has part: feature:83527-83645:1:exon
so has part: feature:83935-84030:1:exon
so has part: feature:84118-84204:1:exon
so has part: feature:84308-84468:1:exon
so has part: feature:84543-85096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78364-78394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78582-79826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82436-82529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82611-82718:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83105-83224:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83437-83440:1:exon

position:83437:1
position: 83437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:83527-83645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83935-84030:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84118-84204:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84308-84468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84543-85096:1:exon

EXTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: EXTL1
product: exostosin like glycosyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015648982.2
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: join(78364..78394,78582..79826,82436..82529,82611..82718,83156..83224,83308..83440,83527..83645,83935..84030,84118..84204,84308..84468,84543..85096)
location: region:78364-85096:1
so has part: feature:78364-78394:1:exon
so has part: feature:78582-79826:1:exon
so has part: feature:82436-82529:1:exon
so has part: feature:82611-82718:1:exon
so has part: feature:83156-83224:1:exon
so has part: feature:83308-83440:1:exon
so has part: feature:83527-83645:1:exon
so has part: feature:83935-84030:1:exon
so has part: feature:84118-84204:1:exon
so has part: feature:84308-84468:1:exon
so has part: feature:84543-85096:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78364-78394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78582-79826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82436-82529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:82611-82718:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83156-83224:1:exon

position:83156:1
position: 83156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:83308-83440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83527-83645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:83935-84030:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84118-84204:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84308-84468:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84543-85096:1:exon

EXTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: EXTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-like 1 isoform X1
translation: MQTRKKYIFLTFLASWLLLFFFGGDQLRRFAPFSGRKAEARRNWPRWTDRSLLKSFADPEELQRDEDPSLLSPRERRAAWLSAYRSSSCRMETCFDFSRCERHGFKVFTYPQERGQPVSETYGKILSSIERSRYHTLNPEEACLFILSIDTLDRDHLSGRYVHNVDEKIRGFPLWNGGRNHLIFNLYSGTWPSYTGDLGFDIGQAILAKASFSTDSFRPGFDVSIPLFSKDHPQRGGDKGWLLQDSVPPKKKYLLVFKGKRYLTGIGSGTRNALHHIHNGKDIISLTTCKHGKDWEKHKDTRCDKDNVDYERFDYQELLHNSTFCIVPRGRRLGSFRFLEALQAACIPVLLSDGWELPFAEAIDWGRAAVVGSERLLLQIPSAVRCIHPERVLAFQQQTQFLWDAYFSSVDKIVHTTLEIIKDRLSPPRSRSRFLWNTLPGGLLLLPDFSTHLGDFPFYYLQHGYSPSKKFTAFIRVASQAGSLSQPILRLIQAVSGSQYCAQIVVLWSCEKAPPPSGKWPQSTVPLTIIQGRRKLSERFFPFEAIQTDAVLSLDEDTSLSTSEVDFAFSVWRSFPERIVGFPTQSHFWDPEQGRWGYTSKRTNELSIVLTAAAFYHRYYHNLFTEYLPAGLRELVDGLAACEDILMNVLVAAVTKLPPIKVSQRKQHKETAAQQAECGDGAAGTPPAAPPSPSAPHGAKVKGTAGSRRFSQRQDCLNQLADWFGYMPLVSSQLRLDPVLFKDQVSVLRKKYPSLEKA
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: join(78892..79826,82436..82529,82611..82718,83105..83224,83308..83440,83527..83645,83935..84030,84118..84204,84308..84468,84543..84966)
location: region:78892-84966:1
so has part: feature:78892-79826:1:exon
so has part: feature:82436-82529:1:exon
so has part: feature:82611-82718:1:exon
so has part: feature:83105-83224:1:exon
so has part: feature:83308-83440:1:exon
so has part: feature:83527-83645:1:exon
so has part: feature:83935-84030:1:exon
so has part: feature:84118-84204:1:exon
so has part: feature:84308-84468:1:exon
so has part: feature:84543-84966:1:exon

XP_015504466.1
type: Protein
SIO_000068: ncbiprotein

position:78892:1
position: 78892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84966:1
position: 84966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78892-79826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82436-82529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82611-82718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83105-83224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83308-83440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83527-83645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83935-84030:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84118-84204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84308-84468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84543-84966:1:exon

EXTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: EXTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-like 1 isoform X2
translation: MQTRKKYIFLTFLASWLLLFFFGGDQLRRFAPFSGRKAEARRNWPRWTDRSLLKSFADPEELQRDEDPSLLSPRERRAAWLSAYRSSSCRMETCFDFSRCERHGFKVFTYPQERGQPVSETYGKILSSIERSRYHTLNPEEACLFILSIDTLDRDHLSGRYVHNVDEKIRGFPLWNGGRNHLIFNLYSGTWPSYTGDLGFDIGQAILAKASFSTDSFRPGFDVSIPLFSKDHPQRGGDKGWLLQDSVPPKKKYLLVFKGKRYLTGIGSGTRNALHHIHNGKDIISLTTCKHGKDWEKHKDTRCDKDNVDYERFDYQELLHNSTFCIVPRGRRLGSFRFLEALQAACIPVLLSDGWELPFAEAIDWGRAAVVGSERLLLQIPSAVRCIHPERVLAFQQQTQFLWDAYFSSVDKIVHTTLEIIKDRLSPPRSRSRFLWNTLPGGLLLLPDFSTHLGDFPFYYLQHGYSPSKKFTAFIRVASQAGSLSQPILRLIQAVSGSQYCAQIVVLWSCEKAPPPSGKWPQSTVPLTIIQGRRKAIQTDAVLSLDEDTSLSTSEVDFAFSVWRSFPERIVGFPTQSHFWDPEQGRWGYTSKRTNELSIVLTAAAFYHRYYHNLFTEYLPAGLRELVDGLAACEDILMNVLVAAVTKLPPIKVSQRKQHKETAAQQAECGDGAAGTPPAAPPSPSAPHGAKVKGTAGSRRFSQRQDCLNQLADWFGYMPLVSSQLRLDPVLFKDQVSVLRKKYPSLEKA
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: join(78892..79826,82436..82529,82611..82718,83105..83224,83308..83440,83527..83645,83935..84030,84145..84204,84308..84468,84543..84966)
location: region:78892-84966:1
so has part: feature:78892-79826:1:exon
so has part: feature:82436-82529:1:exon
so has part: feature:82611-82718:1:exon
so has part: feature:83105-83224:1:exon
so has part: feature:83308-83440:1:exon
so has part: feature:83527-83645:1:exon
so has part: feature:83935-84030:1:exon
so has part: feature:84145-84204:1:exon
so has part: feature:84308-84468:1:exon
so has part: feature:84543-84966:1:exon

XP_015504467.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78892-79826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82436-82529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82611-82718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83105-83224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83308-83440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83527-83645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83935-84030:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84145-84204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84308-84468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84543-84966:1:exon

EXTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: EXTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-like 1 isoform X4
translation: MQTRKKYIFLTFLASWLLLFFFGGDQLRRFAPFSGRKAEARRNWPRWTDRSLLKSFADPEELQRDEDPSLLSPRERRAAWLSAYRSSSCRMETCFDFSRCERHGFKVFTYPQERGQPVSETYGKILSSIERSRYHTLNPEEACLFILSIDTLDRDHLSGRYVHNVDEKIRGFPLWNGGRNHLIFNLYSGTWPSYTGDLGFDIGQAILAKASFSTDSFRPGFDVSIPLFSKDHPQRGGDKGWLLQDSVPPKKKYLLVFKGKRYLTGIGSGTRNALHHIHNGKDIISLTTCKHGKDWEKHKDTRCDKDNVDYERFDYQELLHNSTFCIVPRGRRLGSFRFLEALQAACIPVLLSDGWELPFAEAIDWGRAAVVGSERLLLQIPSAVRCIHPERVLAFQQQTQFLWDAYFSSVDKIVHTTLEHGYSPSKKFTAFIRVASQAGSLSQPILRLIQAVSGSQYCAQIVVLWSCEKAPPPSGKWPQSTVPLTIIQGRRKLSERFFPFEAIQTDAVLSLDEDTSLSTSEVDFAFSVWRSFPERIVGFPTQSHFWDPEQGRWGYTSKRTNELSIVLTAAAFYHRYYHNLFTEYLPAGLRELVDGLAACEDILMNVLVAAVTKLPPIKVSQRKQHKETAAQQAECGDGAAGTPPAAPPSPSAPHGAKVKGTAGSRRFSQRQDCLNQLADWFGYMPLVSSQLRLDPVLFKDQVSVLRKKYPSLEKA
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: join(78892..79826,82436..82529,82611..82718,83105..83224,83437..83440,83527..83645,83935..84030,84118..84204,84308..84468,84543..84966)
location: region:78892-84966:1
so has part: feature:78892-79826:1:exon
so has part: feature:82436-82529:1:exon
so has part: feature:82611-82718:1:exon
so has part: feature:83105-83224:1:exon
so has part: feature:83437-83440:1:exon
so has part: feature:83527-83645:1:exon
so has part: feature:83935-84030:1:exon
so has part: feature:84118-84204:1:exon
so has part: feature:84308-84468:1:exon
so has part: feature:84543-84966:1:exon

XP_015504469.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78892-79826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82436-82529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82611-82718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83105-83224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83437-83440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83527-83645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83935-84030:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84118-84204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84308-84468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84543-84966:1:exon

EXTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: EXTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exostosin-like 1 isoform X3
translation: MQTRKKYIFLTFLASWLLLFFFGGDQLRRFAPFSGRKAEARRNWPRWTDRSLLKSFADPEELQRDEDPSLLSPRERRAAWLSAYRSSSCRMETCFDFSRCERHGFKVFTYPQERGQPVSETYGKILSSIERSRYHTLNPEEACLFILSIDTLDRDHLSGRYVHNVDEKIRGFPLWNGGRNHLIFNLYSGTWPSYTGDLGFDIGQAILAKASFSTDSFRPGFDVSIPLFSKDHPQRGGDKGWLLQDSVPPKKKYLLVFKGKRYLTGIGSGTRNALHHIHNGKDIISLTTCKHGKDWEKHKDTRCDKDNVDYERFDYQELLHNSTFCIVPRGRRLGSFRFLEALQAACIPVLLSDGWELPFAEAIDWGRAAVVGSERLLLQQQTQFLWDAYFSSVDKIVHTTLEIIKDRLSPPRSRSRFLWNTLPGGLLLLPDFSTHLGDFPFYYLQHGYSPSKKFTAFIRVASQAGSLSQPILRLIQAVSGSQYCAQIVVLWSCEKAPPPSGKWPQSTVPLTIIQGRRKLSERFFPFEAIQTDAVLSLDEDTSLSTSEVDFAFSVWRSFPERIVGFPTQSHFWDPEQGRWGYTSKRTNELSIVLTAAAFYHRYYHNLFTEYLPAGLRELVDGLAACEDILMNVLVAAVTKLPPIKVSQRKQHKETAAQQAECGDGAAGTPPAAPPSPSAPHGAKVKGTAGSRRFSQRQDCLNQLADWFGYMPLVSSQLRLDPVLFKDQVSVLRKKYPSLEKA
SIO_010081: EXTL1
subclass of: SO_0000673
so part of: EXTL1
location: join(78892..79826,82436..82529,82611..82718,83156..83224,83308..83440,83527..83645,83935..84030,84118..84204,84308..84468,84543..84966)
location: region:78892-84966:1
so has part: feature:78892-79826:1:exon
so has part: feature:82436-82529:1:exon
so has part: feature:82611-82718:1:exon
so has part: feature:83156-83224:1:exon
so has part: feature:83308-83440:1:exon
so has part: feature:83527-83645:1:exon
so has part: feature:83935-84030:1:exon
so has part: feature:84118-84204:1:exon
so has part: feature:84308-84468:1:exon
so has part: feature:84543-84966:1:exon

XP_015504468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:78892-79826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82436-82529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:82611-82718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:83156-83224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83308-83440:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:83527-83645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83935-84030:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:84118-84204:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:84308-84468:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84543-84966:1:exon

SLC30A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SLC30A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(85510..88371)
location: region:85510-88371:-1
so has part: feature:85510-88371:-1:exon
subclass of: SO_0000010

107213997
type: Gene
SIO_000068: ncbigene

position:85510:-1
position: 85510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88371:-1
position: 88371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:85510-88371:-1:exon

SLC30A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SLC30A2
product: solute carrier family 30 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015648984.1
SIO_010081: SLC30A2
subclass of: SO_0000673
so part of: SLC30A2
location: complement(join(85510..85724,86362..86496,86571..86676,86809..86965,87058..87211,87490..87636,87918..88093,88242..88371))
location: region:85510-88371:-1
so has part: feature:88242-88371:-1:exon
so has part: feature:87918-88093:-1:exon
so has part: feature:87490-87636:-1:exon
so has part: feature:87058-87211:-1:exon
so has part: feature:86809-86965:-1:exon
so has part: feature:86571-86676:-1:exon
so has part: feature:86362-86496:-1:exon
so has part: feature:85510-85724:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88242-88371:-1:exon

position:88242:-1
position: 88242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87918-88093:-1:exon

position:87918:-1
position: 87918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88093:-1
position: 88093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87490-87636:-1:exon

position:87490:-1
position: 87490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87636:-1
position: 87636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87058-87211:-1:exon

position:87058:-1
position: 87058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87211:-1
position: 87211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:86809-86965:-1:exon

position:86809:-1
position: 86809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86965:-1
position: 86965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:86571-86676:-1:exon

position:86571:-1
position: 86571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86676:-1
position: 86676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:86362-86496:-1:exon

position:86362:-1
position: 86362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86496:-1
position: 86496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85510-85724:-1:exon

position:85724:-1
position: 85724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC30A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SLC30A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter 2
translation: MAAGDEKRHLLSEGTGGSCAGAVRGQAAALELGTRRGQHCHTRGTHGHPGQQQRARRKLYLAAGICLFFMVGEAVGGYLAHSLAILTDAAHLLTDFASIMISLFSLWVSSRPPTKTMNFGWHRAEILGALLSVLSIWVVTGVLVYLGAQRLLSGDYDIQGGVMLITSACAVAVNIVMGVALHQPGHGHSHGASGEQPNASVRAAFVHVVGDLLQSVGVLIASYIIFFKPEYKYVDPICTFLFSALVLGTTLTILRDVLLVLMEGTPKGMDFNAVRETLLAVRGVEAVHSLHIWALTAAQPLLSVHIAINAAASAQEVLEEASSRLQGAFRFHTTTIQVESYSEEMRDCRECQPPRD
SIO_010081: SLC30A2
subclass of: SO_0000673
so part of: SLC30A2
location: complement(join(85579..85724,86362..86496,86571..86676,86809..86965,87058..87211,87490..87636,87918..88093,88242..88291))
location: region:85579-88291:-1
so has part: feature:88242-88291:-1:exon
so has part: feature:87918-88093:-1:exon
so has part: feature:87490-87636:-1:exon
so has part: feature:87058-87211:-1:exon
so has part: feature:86809-86965:-1:exon
so has part: feature:86571-86676:-1:exon
so has part: feature:86362-86496:-1:exon
so has part: feature:85579-85724:-1:exon

XP_015504470.1
type: Protein
SIO_000068: ncbiprotein

position:85579:-1
position: 85579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88291:-1
position: 88291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88242-88291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87918-88093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:87490-87636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87058-87211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:86809-86965:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86571-86676:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86362-86496:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85579-85724:-1:exon

TRIM63
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TRIM63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(89265..92653)
location: region:89265-92653:-1
so has part: feature:89265-92653:-1:exon
subclass of: SO_0000010

107214019
type: Gene
SIO_000068: ncbigene

position:89265:-1
position: 89265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92653:-1
position: 92653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89265-92653:-1:exon

TRIM63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TRIM63
product: tripartite motif containing 63, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015649029.2
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: complement(join(89265..89526,89624..89701,89803..89927,90094..90116,90261..90494,90636..90731,90995..91160,92184..92350,92444..92653))
location: region:89265-92653:-1
so has part: feature:92444-92653:-1:exon
so has part: feature:92184-92350:-1:exon
so has part: feature:90995-91160:-1:exon
so has part: feature:90636-90731:-1:exon
so has part: feature:90261-90494:-1:exon
so has part: feature:90094-90116:-1:exon
so has part: feature:89803-89927:-1:exon
so has part: feature:89624-89701:-1:exon
so has part: feature:89265-89526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92444-92653:-1:exon

position:92444:-1
position: 92444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:92184-92350:-1:exon

position:92184:-1
position: 92184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92350:-1
position: 92350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:90995-91160:-1:exon

position:90995:-1
position: 90995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91160:-1
position: 91160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:90636-90731:-1:exon

position:90636:-1
position: 90636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90731:-1
position: 90731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:90261-90494:-1:exon

position:90261:-1
position: 90261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90494:-1
position: 90494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:90094-90116:-1:exon

position:90094:-1
position: 90094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90116:-1
position: 90116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:89803-89927:-1:exon

position:89803:-1
position: 89803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89927:-1
position: 89927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:89624-89701:-1:exon

position:89624:-1
position: 89624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89701:-1
position: 89701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:89265-89526:-1:exon

position:89526:-1
position: 89526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIM63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TRIM63
product: tripartite motif containing 63, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015649030.2
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: complement(join(89265..89526,89624..89698,89803..89927,90094..90116,90261..90494,90636..90731,90995..91163,92184..92350,92444..92653))
location: region:89265-92653:-1
so has part: feature:92444-92653:-1:exon
so has part: feature:92184-92350:-1:exon
so has part: feature:90995-91163:-1:exon
so has part: feature:90636-90731:-1:exon
so has part: feature:90261-90494:-1:exon
so has part: feature:90094-90116:-1:exon
so has part: feature:89803-89927:-1:exon
so has part: feature:89624-89698:-1:exon
so has part: feature:89265-89526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92444-92653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92184-92350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90995-91163:-1:exon

position:91163:-1
position: 91163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:90636-90731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90261-90494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90094-90116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89803-89927:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89624-89698:-1:exon

position:89698:-1
position: 89698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:89265-89526:-1:exon

TRIM63
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TRIM63
product: tripartite motif containing 63, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015649028.2
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: complement(join(89265..89526,89624..89701,89803..89927,90094..90116,90261..90494,90636..90731,90995..91163,92184..92350,92444..92653))
location: region:89265-92653:-1
so has part: feature:92444-92653:-1:exon
so has part: feature:92184-92350:-1:exon
so has part: feature:90995-91163:-1:exon
so has part: feature:90636-90731:-1:exon
so has part: feature:90261-90494:-1:exon
so has part: feature:90094-90116:-1:exon
so has part: feature:89803-89927:-1:exon
so has part: feature:89624-89701:-1:exon
so has part: feature:89265-89526:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92444-92653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92184-92350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90995-91163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90636-90731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90261-90494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90094-90116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89803-89927:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89624-89701:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89265-89526:-1:exon

TRIM63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TRIM63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM63 isoform X2
translation: MDFQAGILQDGSPMESLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAANPYWQSRGSLISGGRFRCPSCRHEVLLDRHGVYGLQRNLLVENIIDIYKQECSRPLKKGEHPKCKEHEDERINIYCVTCEVPTCSMCKVFGAHKDCEVAPLESVFQGQKTELNNCISMLVAGNDRIQTIISQLEDSCQSTEENSEAAKRELCARFDALAALLEEKKAELLQRISQEQADKTAFIQSLICQYKEQLEKSSRLVETAIQAAEETGGAAFLMNAKQLIKTIVEASKGGRLDKIEQGYESMDAFSVSLDHLTEAVHALDFDPAEEDEEYFDGEEEEVEENAAPERTAMASL
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: complement(join(89516..89526,89624..89701,89803..89927,90094..90116,90261..90494,90636..90731,90995..91160,92184..92350,92444..92602))
location: region:89516-92602:-1
so has part: feature:92444-92602:-1:exon
so has part: feature:92184-92350:-1:exon
so has part: feature:90995-91160:-1:exon
so has part: feature:90636-90731:-1:exon
so has part: feature:90261-90494:-1:exon
so has part: feature:90094-90116:-1:exon
so has part: feature:89803-89927:-1:exon
so has part: feature:89624-89701:-1:exon
so has part: feature:89516-89526:-1:exon

XP_015504515.1
type: Protein
SIO_000068: ncbiprotein

position:89516:-1
position: 89516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92602:-1
position: 92602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92444-92602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92184-92350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90995-91160:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90636-90731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90261-90494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90094-90116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89803-89927:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89624-89701:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89516-89526:-1:exon

TRIM63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TRIM63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM63 isoform X3
translation: MDFQAGILQDGSPMESLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAANPYWQSRGSLISGGRFRCPSCRHEVLLDRHGVYGLQRNLLVENIIDIYKQECSSRPLKKGEHPKCKEHEDERINIYCVTCEVPTCSMCKVFGAHKDCEVAPLESVFQGQKTELNNCISMLVAGNDRIQTIISQLEDSCQSTEENSEAAKRELCARFDALAALLEEKKAELLQRISQEQADKTAFIQSLICQYKEQLEKSSRLVETAIQAAEETGGAAFLMNAKQLIKTIVEASKGGRLDKIEQGYESMDAFSVSLDHLTEAVHALDFDPEEDEEYFDGEEEEVEENAAPERTAMASL
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: complement(join(89516..89526,89624..89698,89803..89927,90094..90116,90261..90494,90636..90731,90995..91163,92184..92350,92444..92602))
location: region:89516-92602:-1
so has part: feature:92444-92602:-1:exon
so has part: feature:92184-92350:-1:exon
so has part: feature:90995-91163:-1:exon
so has part: feature:90636-90731:-1:exon
so has part: feature:90261-90494:-1:exon
so has part: feature:90094-90116:-1:exon
so has part: feature:89803-89927:-1:exon
so has part: feature:89624-89698:-1:exon
so has part: feature:89516-89526:-1:exon

XP_015504516.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92444-92602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92184-92350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90995-91163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90636-90731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90261-90494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90094-90116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89803-89927:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89624-89698:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89516-89526:-1:exon

TRIM63
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TRIM63
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase TRIM63 isoform X1
translation: MDFQAGILQDGSPMESLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQAANPYWQSRGSLISGGRFRCPSCRHEVLLDRHGVYGLQRNLLVENIIDIYKQECSSRPLKKGEHPKCKEHEDERINIYCVTCEVPTCSMCKVFGAHKDCEVAPLESVFQGQKTELNNCISMLVAGNDRIQTIISQLEDSCQSTEENSEAAKRELCARFDALAALLEEKKAELLQRISQEQADKTAFIQSLICQYKEQLEKSSRLVETAIQAAEETGGAAFLMNAKQLIKTIVEASKGGRLDKIEQGYESMDAFSVSLDHLTEAVHALDFDPAEEDEEYFDGEEEEVEENAAPERTAMASL
SIO_010081: TRIM63
subclass of: SO_0000673
so part of: TRIM63
location: complement(join(89516..89526,89624..89701,89803..89927,90094..90116,90261..90494,90636..90731,90995..91163,92184..92350,92444..92602))
location: region:89516-92602:-1
so has part: feature:92444-92602:-1:exon
so has part: feature:92184-92350:-1:exon
so has part: feature:90995-91163:-1:exon
so has part: feature:90636-90731:-1:exon
so has part: feature:90261-90494:-1:exon
so has part: feature:90094-90116:-1:exon
so has part: feature:89803-89927:-1:exon
so has part: feature:89624-89701:-1:exon
so has part: feature:89516-89526:-1:exon

XP_015504514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:92444-92602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:92184-92350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:90995-91163:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90636-90731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:90261-90494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90094-90116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:89803-89927:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:89624-89701:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:89516-89526:-1:exon

PDIK1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 95252..108834
location: region:95252-108834:1
so has part: feature:95252-108834:1:exon
subclass of: SO_0000010

107214246
type: Gene
SIO_000068: ncbigene

position:95252:1
position: 95252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108834:1
position: 108834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95252-108834:1:exon

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_015649451.3
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(95252..95309,96110..97515,100127..103124)
location: region:95252-103124:1
so has part: feature:95252-95309:1:exon
so has part: feature:96110-97515:1:exon
so has part: feature:100127-103124:1:exon

position:103124:1
position: 103124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95252-95309:1:exon

position:95309:1
position: 95309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96110-97515:1:exon

position:96110:1
position: 96110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97515:1
position: 97515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100127-103124:1:exon

position:100127:1
position: 100127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_015649450.1
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(95253..95309,96113..97515,100127..103124)
location: region:95253-103124:1
so has part: feature:95253-95309:1:exon
so has part: feature:96113-97515:1:exon
so has part: feature:100127-103124:1:exon

position:95253:1
position: 95253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95253-95309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96113-97515:1:exon

position:96113:1
position: 96113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100127-103124:1:exon

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_015649454.1
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(95254..95309,97214..97515,100127..103124)
location: region:95254-103124:1
so has part: feature:95254-95309:1:exon
so has part: feature:97214-97515:1:exon
so has part: feature:100127-103124:1:exon

position:95254:1
position: 95254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95254-95309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97214-97515:1:exon

position:97214:1
position: 97214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100127-103124:1:exon

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015649452.3
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(95262..95309,96883..97515,100127..103124)
location: region:95262-103124:1
so has part: feature:95262-95309:1:exon
so has part: feature:96883-97515:1:exon
so has part: feature:100127-103124:1:exon

position:95262:1
position: 95262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95262-95309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96883-97515:1:exon

position:96883:1
position: 96883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100127-103124:1:exon

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033519568.1
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(95264..95309,107225..108834)
location: region:95264-108834:1
so has part: feature:95264-95309:1:exon
so has part: feature:107225-108834:1:exon

position:95264:1
position: 95264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95264-95309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107225-108834:1:exon

position:107225:1
position: 107225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033519569.1
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(95264..95309,107225..107535,107755..108834)
location: region:95264-108834:1
so has part: feature:95264-95309:1:exon
so has part: feature:107225-107535:1:exon
so has part: feature:107755-108834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95264-95309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107225-107535:1:exon

position:107535:1
position: 107535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107755-108834:1:exon

position:107755:1
position: 107755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDIK1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PDIK1L
product: PDLIM1 interacting kinase 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_019008893.2
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(95414..97515,100127..103124)
location: region:95414-103124:1
so has part: feature:95414-97515:1:exon
so has part: feature:100127-103124:1:exon

position:95414:1
position: 95414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95414-97515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100127-103124:1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L isoform X2
translation: MVSSQPKYDLIREVGRGSYGVVYEAVVRRTCARVAVKKIRCHAPENVELALREFWALSSIKSQHPNVIHLEECILQKDGMVQKMSHGSSSSLYLQLVETSLKGEIAFDPKSAYYLWFVMDFCDGGDMNEYLLSRKPNRRTNTSFMLQLSSALAFLHKNQIIHRDLKPDNILISQGRADASDPEPTLKVADFGLSKVCSASGQNPEEPVNVNKCFLSTACGTDFYMAPEVWEGHYTAKADIFALGIIIWAMLERITFIDTETKKELLGSYVKQGTAIVPVGEALLENPKMELLIPVKKKSMNARMKQLIKEMLAANPQDRPDAFELELRLVNIAFKDSSWDT
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(97231..97515,100127..100867)
location: region:97231-100867:1
so has part: feature:97231-97515:1:exon
so has part: feature:100127-100867:1:exon

XP_018864438.1
type: Protein
SIO_000068: ncbiprotein

position:97231:1
position: 97231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100867:1
position: 100867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97231-97515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100127-100867:1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L isoform X2
translation: MVSSQPKYDLIREVGRGSYGVVYEAVVRRTCARVAVKKIRCHAPENVELALREFWALSSIKSQHPNVIHLEECILQKDGMVQKMSHGSSSSLYLQLVETSLKGEIAFDPKSAYYLWFVMDFCDGGDMNEYLLSRKPNRRTNTSFMLQLSSALAFLHKNQIIHRDLKPDNILISQGRADASDPEPTLKVADFGLSKVCSASGQNPEEPVNVNKCFLSTACGTDFYMAPEVWEGHYTAKADIFALGIIIWAMLERITFIDTETKKELLGSYVKQGTAIVPVGEALLENPKMELLIPVKKKSMNARMKQLIKEMLAANPQDRPDAFELELRLVNIAFKDSSWDT
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(97231..97515,100127..100867)
location: region:97231-100867:1
so has part: feature:97231-97515:1:exon
so has part: feature:100127-100867:1:exon

XP_015504936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97231-97515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100127-100867:1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L isoform X2
translation: MVSSQPKYDLIREVGRGSYGVVYEAVVRRTCARVAVKKIRCHAPENVELALREFWALSSIKSQHPNVIHLEECILQKDGMVQKMSHGSSSSLYLQLVETSLKGEIAFDPKSAYYLWFVMDFCDGGDMNEYLLSRKPNRRTNTSFMLQLSSALAFLHKNQIIHRDLKPDNILISQGRADASDPEPTLKVADFGLSKVCSASGQNPEEPVNVNKCFLSTACGTDFYMAPEVWEGHYTAKADIFALGIIIWAMLERITFIDTETKKELLGSYVKQGTAIVPVGEALLENPKMELLIPVKKKSMNARMKQLIKEMLAANPQDRPDAFELELRLVNIAFKDSSWDT
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(97231..97515,100127..100867)
location: region:97231-100867:1
so has part: feature:97231-97515:1:exon
so has part: feature:100127-100867:1:exon

XP_015504937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97231-97515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100127-100867:1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L isoform X2
translation: MVSSQPKYDLIREVGRGSYGVVYEAVVRRTCARVAVKKIRCHAPENVELALREFWALSSIKSQHPNVIHLEECILQKDGMVQKMSHGSSSSLYLQLVETSLKGEIAFDPKSAYYLWFVMDFCDGGDMNEYLLSRKPNRRTNTSFMLQLSSALAFLHKNQIIHRDLKPDNILISQGRADASDPEPTLKVADFGLSKVCSASGQNPEEPVNVNKCFLSTACGTDFYMAPEVWEGHYTAKADIFALGIIIWAMLERITFIDTETKKELLGSYVKQGTAIVPVGEALLENPKMELLIPVKKKSMNARMKQLIKEMLAANPQDRPDAFELELRLVNIAFKDSSWDT
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(97231..97515,100127..100867)
location: region:97231-100867:1
so has part: feature:97231-97515:1:exon
so has part: feature:100127-100867:1:exon

XP_015504938.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97231-97515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100127-100867:1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L isoform X2
translation: MVSSQPKYDLIREVGRGSYGVVYEAVVRRTCARVAVKKIRCHAPENVELALREFWALSSIKSQHPNVIHLEECILQKDGMVQKMSHGSSSSLYLQLVETSLKGEIAFDPKSAYYLWFVMDFCDGGDMNEYLLSRKPNRRTNTSFMLQLSSALAFLHKNQIIHRDLKPDNILISQGRADASDPEPTLKVADFGLSKVCSASGQNPEEPVNVNKCFLSTACGTDFYMAPEVWEGHYTAKADIFALGIIIWAMLERITFIDTETKKELLGSYVKQGTAIVPVGEALLENPKMELLIPVKKKSMNARMKQLIKEMLAANPQDRPDAFELELRLVNIAFKDSSWDT
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(97231..97515,100127..100867)
location: region:97231-100867:1
so has part: feature:97231-97515:1:exon
so has part: feature:100127-100867:1:exon

XP_015504940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:97231-97515:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100127-100867:1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L isoform X1
translation: MVPLGSPTLAVCASSNLRLVAPGRGSPLAWLSRGPECPQGSGGSGGRRPSAVERLEADKAKYVKSQQVINRRQEPALRGSPRLSPHGRRRLGRQQCSELCPGSELSRDGSRKLPCPQSPVSRRSGSRRLLRPDSLVIYRQKRDCLAGDKENTKGSGLVRRLFQGPLRDRPPSSPPARALGEGPRAPQSPETPMLWAPAEKDEARTPGGGSGGDSGGIFPMSCHPPSPAAEQPPGTPGKEPLALRVSLPLSEQERFFNYCGLDRALVELLGRERFGPAGWDSASARPPGSCESEPGRASGGSEGDAGPGEEEPDARLGSAVSVVERNARVIKWLYGCQRAWAAAKESTV
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: 107335..108381
location: region:107335-108381:1
so has part: feature:107335-108381:1:exon

XP_033375459.1
type: Protein
SIO_000068: ncbiprotein

position:107335:1
position: 107335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108381:1
position: 108381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107335-108381:1:exon

PDIK1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PDIK1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase PDIK1L isoform X3
translation: MVPLGSPTLAVCASSNLRLVAPGRGSPLAWLSRGPECPQGSGGSGGRRPSAVERLEADKAKYVKSQQKRDCLAGDKENTKGSGLVRRLFQGPLRDRPPSSPPARALGEGPRAPQSPETPMLWAPAEKDEARTPGGGSGGDSGGIFPMSCHPPSPAAEQPPGTPGKEPLALRVSLPLSEQERFFNYCGLDRALVELLGRERFGPAGWDSASARPPGSCESEPGRASGGSEGDAGPGEEEPDARLGSAVSVVERNARVIKWLYGCQRAWAAAKESTV
SIO_010081: PDIK1L
subclass of: SO_0000673
so part of: PDIK1L
location: join(107335..107535,107755..108381)
location: region:107335-108381:1
so has part: feature:107335-107535:1:exon
so has part: feature:107755-108381:1:exon

XP_033375460.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107335-107535:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107755-108381:1:exon

C23H1orf232
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: C23H1orf232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(108917..110414)
location: region:108917-110414:-1
so has part: feature:108917-110414:-1:exon
subclass of: SO_0000010

107214028
type: Gene
SIO_000068: ncbigene

position:108917:-1
position: 108917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110414:-1
position: 110414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108917-110414:-1:exon

C23H1orf232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: C23H1orf232
product: chromosome 23 C1orf232 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015649039.3
SIO_010081: C23H1orf232
subclass of: SO_0000673
so part of: C23H1orf232
location: complement(join(108917..109360,109552..109649,109732..109818,109929..110414))
location: region:108917-110414:-1
so has part: feature:109929-110414:-1:exon
so has part: feature:109732-109818:-1:exon
so has part: feature:109552-109649:-1:exon
so has part: feature:108917-109360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:109929-110414:-1:exon

position:109929:-1
position: 109929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109732-109818:-1:exon

position:109732:-1
position: 109732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109818:-1
position: 109818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:109552-109649:-1:exon

position:109552:-1
position: 109552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109649:-1
position: 109649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:108917-109360:-1:exon

position:109360:-1
position: 109360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C23H1orf232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: C23H1orf232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C1orf232 homolog
translation: MKPPDRRLARSARPAARGSGPAEPLAMAQGFWRLYKAKVLQSLGGPRPDGALQDEGDPPELMETAEPPALMEEGASPVSQLARKVQGVGARGWRTLSSFFSREDEHQLLGPEPCPDHPLATEPSEMPHTEKAPGFWDLFATKWQQASGPDKGVPPPEPAESPGEPPGDDGSDLREPEEGAFHWGFLAGKLAEIRNKTAPKGN
SIO_010081: C23H1orf232
subclass of: SO_0000673
so part of: C23H1orf232
location: complement(join(109102..109360,109552..109649,109732..109818,109929..110093))
location: region:109102-110093:-1
so has part: feature:109929-110093:-1:exon
so has part: feature:109732-109818:-1:exon
so has part: feature:109552-109649:-1:exon
so has part: feature:109102-109360:-1:exon

XP_015504525.2
type: Protein
SIO_000068: ncbiprotein

position:109102:-1
position: 109102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110093:-1
position: 110093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:109929-110093:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109732-109818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:109552-109649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109102-109360:-1:exon

ZNF593
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ZNF593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 110659..111812
location: region:110659-111812:1
so has part: feature:110659-111812:1:exon
subclass of: SO_0000010

107214111
type: Gene
SIO_000068: ncbigene

position:110659:1
position: 110659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111812:1
position: 111812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110659-111812:1:exon

ZNF593
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZNF593
product: zinc finger protein 593
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_015649145.3
SIO_010081: ZNF593
subclass of: SO_0000673
so part of: ZNF593
location: join(110659..110889,111178..111240,111356..111812)
location: region:110659-111812:1
so has part: feature:110659-110889:1:exon
so has part: feature:111178-111240:1:exon
so has part: feature:111356-111812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:110659-110889:1:exon

position:110889:1
position: 110889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:111178-111240:1:exon

position:111178:1
position: 111178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111240:1
position: 111240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:111356-111812:1:exon

position:111356:1
position: 111356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF593
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZNF593
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 593
translation: MSPRNGRRTGAHRAHSLARQLKTKRRRRDLDEIHADLKPENAARLLRQEIDPDLPGCAQFYCLHCARYFVDLNSMKEHFRSKVHKKRLKQLREAPYTQEEAERAAGMGSYIPPKKVEVQTQPLEEVTEMEASS
SIO_010081: ZNF593
subclass of: SO_0000673
so part of: ZNF593
location: join(110693..110889,111178..111240,111356..111497)
location: region:110693-111497:1
so has part: feature:110693-110889:1:exon
so has part: feature:111178-111240:1:exon
so has part: feature:111356-111497:1:exon

XP_015504631.1
type: Protein
SIO_000068: ncbiprotein

position:110693:1
position: 110693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111497:1
position: 111497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:110693-110889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:111178-111240:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:111356-111497:1:exon

CNKSR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CNKSR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 114017..120822
location: region:114017-120822:1
so has part: feature:114017-120822:1:exon
subclass of: SO_0000010

107214280
type: Gene
SIO_000068: ncbigene

position:114017:1
position: 114017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120822:1
position: 120822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114017-120822:1:exon

CNKSR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CNKSR1
product: connector enhancer of kinase suppressor of Ras 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019008898.2
SIO_010081: CNKSR1
subclass of: SO_0000673
so part of: CNKSR1
location: join(114017..114143,114405..114562,114855..115045,115113..115197,115338..115379,115457..115756,115839..115898,116261..116329,116609..116728,116891..116976,117430..117563,117638..117801,117953..117977,118067..118239,118325..118398,118907..118978,119073..119146,119351..119415,119492..119594,120077..120258,120341..120822)
location: region:114017-120822:1
so has part: feature:114017-114143:1:exon
so has part: feature:114405-114562:1:exon
so has part: feature:114855-115045:1:exon
so has part: feature:115113-115197:1:exon
so has part: feature:115338-115379:1:exon
so has part: feature:115457-115756:1:exon
so has part: feature:115839-115898:1:exon
so has part: feature:116261-116329:1:exon
so has part: feature:116609-116728:1:exon
so has part: feature:116891-116976:1:exon
so has part: feature:117430-117563:1:exon
so has part: feature:117638-117801:1:exon
so has part: feature:117953-117977:1:exon
so has part: feature:118067-118239:1:exon
so has part: feature:118325-118398:1:exon
so has part: feature:118907-118978:1:exon
so has part: feature:119073-119146:1:exon
so has part: feature:119351-119415:1:exon
so has part: feature:119492-119594:1:exon
so has part: feature:120077-120258:1:exon
so has part: feature:120341-120822:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114017-114143:1:exon

position:114143:1
position: 114143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:114405-114562:1:exon

position:114405:1
position: 114405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:114562:1
position: 114562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:114855-115045:1:exon

position:114855:1
position: 114855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115045:1
position: 115045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:115113-115197:1:exon

position:115113:1
position: 115113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115197:1
position: 115197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:115338-115379:1:exon

position:115338:1
position: 115338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115379:1
position: 115379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:115457-115756:1:exon

position:115457:1
position: 115457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115756:1
position: 115756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:115839-115898:1:exon

position:115839:1
position: 115839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:115898:1
position: 115898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:116261-116329:1:exon

position:116261:1
position: 116261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116329:1
position: 116329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:116609-116728:1:exon

position:116609:1
position: 116609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116728:1
position: 116728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:116891-116976:1:exon

position:116891:1
position: 116891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116976:1
position: 116976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:117430-117563:1:exon

position:117430:1
position: 117430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117563:1
position: 117563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:117638-117801:1:exon

position:117638:1
position: 117638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117801:1
position: 117801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:117953-117977:1:exon

position:117953:1
position: 117953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117977:1
position: 117977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:118067-118239:1:exon

position:118067:1
position: 118067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118239:1
position: 118239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:118325-118398:1:exon

position:118325:1
position: 118325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118398:1
position: 118398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:118907-118978:1:exon

position:118907:1
position: 118907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118978:1
position: 118978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:119073-119146:1:exon

position:119073:1
position: 119073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119146:1
position: 119146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:119351-119415:1:exon

position:119351:1
position: 119351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119415:1
position: 119415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:119492-119594:1:exon

position:119492:1
position: 119492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119594:1
position: 119594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:120077-120258:1:exon

position:120077:1
position: 120077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120258:1
position: 120258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:120341-120822:1:exon

position:120341:1
position: 120341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNKSR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CNKSR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: connector enhancer of kinase suppressor of ras 1
translation: MEPVRSWGPAQAAAWLRGLDAAVQGYPFEAWGLSGPDLLGLDAGVLEALGVWPLGHQELLLEAVEQLRNLDTGLASTSLRTLTERLQELAQGIQSLVQGGLSAGDAPQPPSLTLLARVIDLVGAAKELFSWLNRYLFSTLNDFSASRDIILLCAQLAEMLQADLPVAERSSGVLQICQHIVGICESIVGCSPPALLDRRAVLQRVGLALPPSPQGSPPMSPSTPTLPLGLWQSPPTSPDTPTLPPSQWSSPPGSPDTPTPPADLVGSPQPLLTARLGFEITSTSSCLHFVSATTSEALAAHRGHVLPGDEIVQVNEQVVVGWTPVNLARKLLEKGNRVTLVLKKIPLDLPGSPPSPRQQPPGAFLDAADSPGTRSSESPGSPVSLTSSVAADLDSGPDSAPDPVTDEEQEEDERDLRLPEAAVEELPGLSEQGAAEEVWDSGSTLGTPLDTPPSTPAATEPCATELSPRAAPSTGAGGAEPSQLPGEGSPRTRPKGVATRLSRRRVSCRDLGRVDCDGWLLKKKDHVGFMAQKWKRCWFVLKGHTLYWYNHPNDERAAGLINVATYNLESTREQKKKYVFQLCHQTYKPFVFAAETLADLSMWVSRLVTAKTKYTLAHQAVPDKEEDCYSETEAEDPDDESPRHGSDSPRKRLQNTPEKAQLSPASSTASSPQGSPRPCSPMEPAGEDLESLMRCLRQGGLSLMGQQRFLTQEQCRKSFLRRNKNPHINERVHAVRALQSTLKAKLAELQALEQLLGEAALTSDTFRRWKEEHQELYRELREGWAGQQGQGHDQGHAGDQQSPHEEAAEP
SIO_010081: CNKSR1
subclass of: SO_0000673
so part of: CNKSR1
location: join(114092..114143,114405..114562,114855..115045,115113..115197,115338..115379,115457..115756,115839..115898,116261..116329,116609..116728,116891..116976,117430..117563,117638..117801,117953..117977,118067..118239,118325..118398,118907..118978,119073..119146,119351..119415,119492..119594,120077..120258,120341..120544)
location: region:114092-120544:1
so has part: feature:114092-114143:1:exon
so has part: feature:114405-114562:1:exon
so has part: feature:114855-115045:1:exon
so has part: feature:115113-115197:1:exon
so has part: feature:115338-115379:1:exon
so has part: feature:115457-115756:1:exon
so has part: feature:115839-115898:1:exon
so has part: feature:116261-116329:1:exon
so has part: feature:116609-116728:1:exon
so has part: feature:116891-116976:1:exon
so has part: feature:117430-117563:1:exon
so has part: feature:117638-117801:1:exon
so has part: feature:117953-117977:1:exon
so has part: feature:118067-118239:1:exon
so has part: feature:118325-118398:1:exon
so has part: feature:118907-118978:1:exon
so has part: feature:119073-119146:1:exon
so has part: feature:119351-119415:1:exon
so has part: feature:119492-119594:1:exon
so has part: feature:120077-120258:1:exon
so has part: feature:120341-120544:1:exon

XP_018864443.1
type: Protein
SIO_000068: ncbiprotein

position:114092:1
position: 114092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:120544:1
position: 120544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114092-114143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:114405-114562:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:114855-115045:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:115113-115197:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:115338-115379:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115457-115756:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:115839-115898:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:116261-116329:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:116609-116728:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:116891-116976:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:117430-117563:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:117638-117801:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:117953-117977:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:118067-118239:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:118325-118398:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:118907-118978:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:119073-119146:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:119351-119415:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:119492-119594:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:120077-120258:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:120341-120544:1:exon

CEP85
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CEP85
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 121399..133062
location: region:121399-133062:1
so has part: feature:121399-133062:1:exon
subclass of: SO_0000010

107214267
type: Gene
SIO_000068: ncbigene

position:121399:1
position: 121399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133062:1
position: 133062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121399-133062:1:exon

CEP85
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CEP85
product: centrosomal protein 85, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015649491.2
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: join(121399..121465,122604..122675,123212..123352,125253..125962,126608..126741,127530..127647,127977..128162,128488..128640,128740..128894,129110..129230,129649..129699,129785..129892,130430..130658,130928..133062)
location: region:121399-133062:1
so has part: feature:121399-121465:1:exon
so has part: feature:122604-122675:1:exon
so has part: feature:123212-123352:1:exon
so has part: feature:125253-125962:1:exon
so has part: feature:126608-126741:1:exon
so has part: feature:127530-127647:1:exon
so has part: feature:127977-128162:1:exon
so has part: feature:128488-128640:1:exon
so has part: feature:128740-128894:1:exon
so has part: feature:129110-129230:1:exon
so has part: feature:129649-129699:1:exon
so has part: feature:129785-129892:1:exon
so has part: feature:130430-130658:1:exon
so has part: feature:130928-133062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121399-121465:1:exon

position:121465:1
position: 121465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:122604-122675:1:exon

position:122604:1
position: 122604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122675:1
position: 122675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:123212-123352:1:exon

position:123212:1
position: 123212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123352:1
position: 123352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:125253-125962:1:exon

position:125253:1
position: 125253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125962:1
position: 125962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:126608-126741:1:exon

position:126608:1
position: 126608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126741:1
position: 126741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:127530-127647:1:exon

position:127530:1
position: 127530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127647:1
position: 127647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:127977-128162:1:exon

position:127977:1
position: 127977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128162:1
position: 128162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:128488-128640:1:exon

position:128488:1
position: 128488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128640:1
position: 128640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:128740-128894:1:exon

position:128740:1
position: 128740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128894:1
position: 128894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:129110-129230:1:exon

position:129110:1
position: 129110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129230:1
position: 129230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:129649-129699:1:exon

position:129649:1
position: 129649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129699:1
position: 129699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:129785-129892:1:exon

position:129785:1
position: 129785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129892:1
position: 129892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:130430-130658:1:exon

position:130430:1
position: 130430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130658:1
position: 130658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:130928-133062:1:exon

position:130928:1
position: 130928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CEP85
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CEP85
product: centrosomal protein 85, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_019008895.2
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: join(121512..122675,123212..123352,125253..125962,126608..126741,127530..127647,127977..128162,128488..128640,128740..128894,129110..129230,129649..129699,129785..129892,130430..130658,130928..133062)
location: region:121512-133062:1
so has part: feature:121512-122675:1:exon
so has part: feature:123212-123352:1:exon
so has part: feature:125253-125962:1:exon
so has part: feature:126608-126741:1:exon
so has part: feature:127530-127647:1:exon
so has part: feature:127977-128162:1:exon
so has part: feature:128488-128640:1:exon
so has part: feature:128740-128894:1:exon
so has part: feature:129110-129230:1:exon
so has part: feature:129649-129699:1:exon
so has part: feature:129785-129892:1:exon
so has part: feature:130430-130658:1:exon
so has part: feature:130928-133062:1:exon

position:121512:1
position: 121512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121512-122675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123212-123352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125253-125962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126608-126741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127530-127647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127977-128162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128488-128640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128740-128894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129110-129230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129649-129699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129785-129892:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130430-130658:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130928-133062:1:exon

CEP85
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CEP85
product: centrosomal protein 85, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015649492.3
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: join(121512..121835,122604..122675,123212..123352,125253..125962,126608..126741,127530..127647,127977..128162,128488..128640,128740..128894,129110..129230,129649..129699,129785..129892,130430..130658,130928..133062)
location: region:121512-133062:1
so has part: feature:121512-121835:1:exon
so has part: feature:122604-122675:1:exon
so has part: feature:123212-123352:1:exon
so has part: feature:125253-125962:1:exon
so has part: feature:126608-126741:1:exon
so has part: feature:127530-127647:1:exon
so has part: feature:127977-128162:1:exon
so has part: feature:128488-128640:1:exon
so has part: feature:128740-128894:1:exon
so has part: feature:129110-129230:1:exon
so has part: feature:129649-129699:1:exon
so has part: feature:129785-129892:1:exon
so has part: feature:130430-130658:1:exon
so has part: feature:130928-133062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121512-121835:1:exon

position:121835:1
position: 121835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:122604-122675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123212-123352:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125253-125962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:126608-126741:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127530-127647:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:127977-128162:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128488-128640:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:128740-128894:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129110-129230:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129649-129699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:129785-129892:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130430-130658:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:130928-133062:1:exon

CEP85
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CEP85
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 85 kDa isoform X1
translation: MAAPEKDPNLRLLQKNPSDPSSCQKSKFLETEWKSVKPQSRLSRWPSVAESGDGGIGTSCSDSTEDFCNSSSGSSFHPIKTQVTIPTAHVMPSTLGASPSKLCPAGNQGCSQSSAVPASAPDRPGLARNGDLSAGKSSQVPPRDLLRLYRASGENGCERSWPPAADHTRTEDTWKFDTPAIEQTLNQSLFLDSVCTDPLHRCQKFNPSSEAGKDHYKVLPESKQAPGANGACEPRDGTWPGGSRLMPAGLQANNFYSKPAVAPPARAWMQEGCTLHPHQGVCELSAWKQQLDKVRLQVEQMQLQNGGTCPHSSLYSPSLPAPDPAQWINILNSNENLLKEKELLIDRQRQHISQLEQKVRESELQVHSALLGCPATYGDVYMLRMQELQRENTFLRAQFTEKTESLSKENIELERKLAAAEVDVKLVRESLKETVQKHAEELKKQEERVKGRDKHINNLKKKCQKESEQNKERQQRIETLERYLADLPTLEDHQKQSQKLKESELKTTALQETVLALESELGDVQAAFREQELELETQKHKEMELLSTVHSLQDKLQQHAKNAERGPPAQDGERQKMEHDSLKKECDCLRKIVDKKQKKMEQLSLQIKNLEEQVAQEEGTSQALKEEAMRRENALQQLRAAVKELSVQNQDLIEKNLTLQEQLRQAQLTAQPLPADTAHLAQELHGELASCLQDLQSVYSIVTQRAQGKDPNLSLLLGIHSVQYPVKEKDDLLSPDGLAKKLVEVKQLHKEVEDLRTAISDRYAQDMGDNCITQ
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: join(122621..122675,123212..123352,125253..125962,126608..126741,127530..127647,127977..128162,128488..128640,128740..128894,129110..129230,129649..129699,129785..129892,130430..130658,130928..131091)
location: region:122621-131091:1
so has part: feature:122621-122675:1:exon
so has part: feature:123212-123352:1:exon
so has part: feature:125253-125962:1:exon
so has part: feature:126608-126741:1:exon
so has part: feature:127530-127647:1:exon
so has part: feature:127977-128162:1:exon
so has part: feature:128488-128640:1:exon
so has part: feature:128740-128894:1:exon
so has part: feature:129110-129230:1:exon
so has part: feature:129649-129699:1:exon
so has part: feature:129785-129892:1:exon
so has part: feature:130430-130658:1:exon
so has part: feature:130928-131091:1:exon

XP_018864440.1
type: Protein
SIO_000068: ncbiprotein

position:122621:1
position: 122621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131091:1
position: 131091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122621-122675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123212-123352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125253-125962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126608-126741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127530-127647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127977-128162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128488-128640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128740-128894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129110-129230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129649-129699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129785-129892:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130430-130658:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130928-131091:1:exon

CEP85
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CEP85
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 85 kDa isoform X1
translation: MAAPEKDPNLRLLQKNPSDPSSCQKSKFLETEWKSVKPQSRLSRWPSVAESGDGGIGTSCSDSTEDFCNSSSGSSFHPIKTQVTIPTAHVMPSTLGASPSKLCPAGNQGCSQSSAVPASAPDRPGLARNGDLSAGKSSQVPPRDLLRLYRASGENGCERSWPPAADHTRTEDTWKFDTPAIEQTLNQSLFLDSVCTDPLHRCQKFNPSSEAGKDHYKVLPESKQAPGANGACEPRDGTWPGGSRLMPAGLQANNFYSKPAVAPPARAWMQEGCTLHPHQGVCELSAWKQQLDKVRLQVEQMQLQNGGTCPHSSLYSPSLPAPDPAQWINILNSNENLLKEKELLIDRQRQHISQLEQKVRESELQVHSALLGCPATYGDVYMLRMQELQRENTFLRAQFTEKTESLSKENIELERKLAAAEVDVKLVRESLKETVQKHAEELKKQEERVKGRDKHINNLKKKCQKESEQNKERQQRIETLERYLADLPTLEDHQKQSQKLKESELKTTALQETVLALESELGDVQAAFREQELELETQKHKEMELLSTVHSLQDKLQQHAKNAERGPPAQDGERQKMEHDSLKKECDCLRKIVDKKQKKMEQLSLQIKNLEEQVAQEEGTSQALKEEAMRRENALQQLRAAVKELSVQNQDLIEKNLTLQEQLRQAQLTAQPLPADTAHLAQELHGELASCLQDLQSVYSIVTQRAQGKDPNLSLLLGIHSVQYPVKEKDDLLSPDGLAKKLVEVKQLHKEVEDLRTAISDRYAQDMGDNCITQ
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: join(122621..122675,123212..123352,125253..125962,126608..126741,127530..127647,127977..128162,128488..128640,128740..128894,129110..129230,129649..129699,129785..129892,130430..130658,130928..131091)
location: region:122621-131091:1
so has part: feature:122621-122675:1:exon
so has part: feature:123212-123352:1:exon
so has part: feature:125253-125962:1:exon
so has part: feature:126608-126741:1:exon
so has part: feature:127530-127647:1:exon
so has part: feature:127977-128162:1:exon
so has part: feature:128488-128640:1:exon
so has part: feature:128740-128894:1:exon
so has part: feature:129110-129230:1:exon
so has part: feature:129649-129699:1:exon
so has part: feature:129785-129892:1:exon
so has part: feature:130430-130658:1:exon
so has part: feature:130928-131091:1:exon

XP_015504977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122621-122675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123212-123352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125253-125962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126608-126741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127530-127647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127977-128162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128488-128640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128740-128894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129110-129230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129649-129699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129785-129892:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130430-130658:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130928-131091:1:exon

CEP85
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CEP85
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 85 kDa isoform X1
translation: MAAPEKDPNLRLLQKNPSDPSSCQKSKFLETEWKSVKPQSRLSRWPSVAESGDGGIGTSCSDSTEDFCNSSSGSSFHPIKTQVTIPTAHVMPSTLGASPSKLCPAGNQGCSQSSAVPASAPDRPGLARNGDLSAGKSSQVPPRDLLRLYRASGENGCERSWPPAADHTRTEDTWKFDTPAIEQTLNQSLFLDSVCTDPLHRCQKFNPSSEAGKDHYKVLPESKQAPGANGACEPRDGTWPGGSRLMPAGLQANNFYSKPAVAPPARAWMQEGCTLHPHQGVCELSAWKQQLDKVRLQVEQMQLQNGGTCPHSSLYSPSLPAPDPAQWINILNSNENLLKEKELLIDRQRQHISQLEQKVRESELQVHSALLGCPATYGDVYMLRMQELQRENTFLRAQFTEKTESLSKENIELERKLAAAEVDVKLVRESLKETVQKHAEELKKQEERVKGRDKHINNLKKKCQKESEQNKERQQRIETLERYLADLPTLEDHQKQSQKLKESELKTTALQETVLALESELGDVQAAFREQELELETQKHKEMELLSTVHSLQDKLQQHAKNAERGPPAQDGERQKMEHDSLKKECDCLRKIVDKKQKKMEQLSLQIKNLEEQVAQEEGTSQALKEEAMRRENALQQLRAAVKELSVQNQDLIEKNLTLQEQLRQAQLTAQPLPADTAHLAQELHGELASCLQDLQSVYSIVTQRAQGKDPNLSLLLGIHSVQYPVKEKDDLLSPDGLAKKLVEVKQLHKEVEDLRTAISDRYAQDMGDNCITQ
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: join(122621..122675,123212..123352,125253..125962,126608..126741,127530..127647,127977..128162,128488..128640,128740..128894,129110..129230,129649..129699,129785..129892,130430..130658,130928..131091)
location: region:122621-131091:1
so has part: feature:122621-122675:1:exon
so has part: feature:123212-123352:1:exon
so has part: feature:125253-125962:1:exon
so has part: feature:126608-126741:1:exon
so has part: feature:127530-127647:1:exon
so has part: feature:127977-128162:1:exon
so has part: feature:128488-128640:1:exon
so has part: feature:128740-128894:1:exon
so has part: feature:129110-129230:1:exon
so has part: feature:129649-129699:1:exon
so has part: feature:129785-129892:1:exon
so has part: feature:130430-130658:1:exon
so has part: feature:130928-131091:1:exon

XP_015504978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:122621-122675:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123212-123352:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:125253-125962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126608-126741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127530-127647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127977-128162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128488-128640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128740-128894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129110-129230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129649-129699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129785-129892:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130430-130658:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130928-131091:1:exon

CEP85
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CEP85
product: centrosomal protein 85, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015649493.3
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: join(123275..123352,124751..124937,125253..125962,126608..126741,127530..127647,127977..128162,128488..128640,128740..128894,129110..129230,129649..129699,129785..129892,130430..130658,130928..133062)
location: region:123275-133062:1
so has part: feature:123275-123352:1:exon
so has part: feature:124751-124937:1:exon
so has part: feature:125253-125962:1:exon
so has part: feature:126608-126741:1:exon
so has part: feature:127530-127647:1:exon
so has part: feature:127977-128162:1:exon
so has part: feature:128488-128640:1:exon
so has part: feature:128740-128894:1:exon
so has part: feature:129110-129230:1:exon
so has part: feature:129649-129699:1:exon
so has part: feature:129785-129892:1:exon
so has part: feature:130430-130658:1:exon
so has part: feature:130928-133062:1:exon

position:123275:1
position: 123275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123275-123352:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:124751-124937:1:exon

position:124751:1
position: 124751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124937:1
position: 124937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:125253-125962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:126608-126741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127530-127647:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127977-128162:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128488-128640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128740-128894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129110-129230:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129649-129699:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:129785-129892:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130430-130658:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:130928-133062:1:exon

CEP85
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CEP85
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 85 kDa isoform X2
translation: MPSTLGASPSKLCPAGNQGCSQSSAVPASAPDRPGLARNGDLSAGKSSQVPPRDLLRLYRASGENGCERSWPPAADHTRTEDTWKFDTPAIEQTLNQSLFLDSVCTDPLHRCQKFNPSSEAGKDHYKVLPESKQAPGANGACEPRDGTWPGGSRLMPAGLQANNFYSKPAVAPPARAWMQEGCTLHPHQGVCELSAWKQQLDKVRLQVEQMQLQNGGTCPHSSLYSPSLPAPDPAQWINILNSNENLLKEKELLIDRQRQHISQLEQKVRESELQVHSALLGCPATYGDVYMLRMQELQRENTFLRAQFTEKTESLSKENIELERKLAAAEVDVKLVRESLKETVQKHAEELKKQEERVKGRDKHINNLKKKCQKESEQNKERQQRIETLERYLADLPTLEDHQKQSQKLKESELKTTALQETVLALESELGDVQAAFREQELELETQKHKEMELLSTVHSLQDKLQQHAKNAERGPPAQDGERQKMEHDSLKKECDCLRKIVDKKQKKMEQLSLQIKNLEEQVAQEEGTSQALKEEAMRRENALQQLRAAVKELSVQNQDLIEKNLTLQEQLRQAQLTAQPLPADTAHLAQELHGELASCLQDLQSVYSIVTQRAQGKDPNLSLLLGIHSVQYPVKEKDDLLSPDGLAKKLVEVKQLHKEVEDLRTAISDRYAQDMGDNCITQ
SIO_010081: CEP85
subclass of: SO_0000673
so part of: CEP85
location: join(125327..125962,126608..126741,127530..127647,127977..128162,128488..128640,128740..128894,129110..129230,129649..129699,129785..129892,130430..130658,130928..131091)
location: region:125327-131091:1
so has part: feature:125327-125962:1:exon
so has part: feature:126608-126741:1:exon
so has part: feature:127530-127647:1:exon
so has part: feature:127977-128162:1:exon
so has part: feature:128488-128640:1:exon
so has part: feature:128740-128894:1:exon
so has part: feature:129110-129230:1:exon
so has part: feature:129649-129699:1:exon
so has part: feature:129785-129892:1:exon
so has part: feature:130430-130658:1:exon
so has part: feature:130928-131091:1:exon

XP_015504979.1
type: Protein
SIO_000068: ncbiprotein

position:125327:1
position: 125327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125327-125962:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126608-126741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:127530-127647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127977-128162:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:128488-128640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:128740-128894:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:129110-129230:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:129649-129699:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129785-129892:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:130430-130658:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130928-131091:1:exon

SH3BGRL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SH3BGRL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 133276..135130
location: region:133276-135130:1
so has part: feature:133276-135130:1:exon
subclass of: SO_0000010

107214269
type: Gene
SIO_000068: ncbigene

position:133276:1
position: 133276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135130:1
position: 135130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133276-135130:1:exon

SH3BGRL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SH3BGRL3
product: SH3 domain binding glutamate rich protein like 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 38 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_015649499.1
SIO_010081: SH3BGRL3
subclass of: SO_0000673
so part of: SH3BGRL3
location: join(133276..133464,133740..133907,134205..135130)
location: region:133276-135130:1
so has part: feature:133276-133464:1:exon
so has part: feature:133740-133907:1:exon
so has part: feature:134205-135130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133276-133464:1:exon

position:133464:1
position: 133464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133740-133907:1:exon

position:133740:1
position: 133740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133907:1
position: 133907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134205-135130:1:exon

position:134205:1
position: 134205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SH3BGRL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SH3BGRL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH3 domain-binding glutamic acid-rich-like protein 3
translation: MPGPAGPIGPRSHMPGGGGAAAPPSIPPSLPPPAGLSAGSGRDRTMSTLKVYSTSVTGSREIKSQQSEVTRILDGKNIKYELVDISQDNALREEMRAKAGNPKAIPPQIVNGDQYCGDYELFVEAVEQNTLQEFLKLA
SIO_010081: SH3BGRL3
subclass of: SO_0000673
so part of: SH3BGRL3
location: join(133282..133464,133740..133907,134205..134270)
location: region:133282-134270:1
so has part: feature:133282-133464:1:exon
so has part: feature:133740-133907:1:exon
so has part: feature:134205-134270:1:exon

XP_015504985.1
type: Protein
SIO_000068: ncbiprotein

position:133282:1
position: 133282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134270:1
position: 134270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133282-133464:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133740-133907:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134205-134270:1:exon

UBXN11
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: UBXN11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(135849..145238)
location: region:135849-145238:-1
so has part: feature:135849-145238:-1:exon
subclass of: SO_0000010

107214268
type: Gene
SIO_000068: ncbigene

position:135849:-1
position: 135849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:145238:-1
position: 145238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135849-145238:-1:exon

UBXN11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: UBXN11
product: UBX domain protein 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015649496.3
SIO_010081: UBXN11
subclass of: SO_0000673
so part of: UBXN11
location: complement(join(135849..136759,137402..137548,138252..138319,138517..138608,139670..139790,140617..140694,140988..141205,142492..142606,143041..143117,143973..144027,144669..144763,144972..145238))
location: region:135849-145238:-1
so has part: feature:144972-145238:-1:exon
so has part: feature:144669-144763:-1:exon
so has part: feature:143973-144027:-1:exon
so has part: feature:143041-143117:-1:exon
so has part: feature:142492-142606:-1:exon
so has part: feature:140988-141205:-1:exon
so has part: feature:140617-140694:-1:exon
so has part: feature:139670-139790:-1:exon
so has part: feature:138517-138608:-1:exon
so has part: feature:138252-138319:-1:exon
so has part: feature:137402-137548:-1:exon
so has part: feature:135849-136759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144972-145238:-1:exon

position:144972:-1
position: 144972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144669-144763:-1:exon

position:144669:-1
position: 144669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144763:-1
position: 144763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143973-144027:-1:exon

position:143973:-1
position: 143973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144027:-1
position: 144027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:143041-143117:-1:exon

position:143041:-1
position: 143041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143117:-1
position: 143117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142492-142606:-1:exon

position:142492:-1
position: 142492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142606:-1
position: 142606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:140988-141205:-1:exon

position:140988:-1
position: 140988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141205:-1
position: 141205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:140617-140694:-1:exon

position:140617:-1
position: 140617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140694:-1
position: 140694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:139670-139790:-1:exon

position:139670:-1
position: 139670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139790:-1
position: 139790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:138517-138608:-1:exon

position:138517:-1
position: 138517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138608:-1
position: 138608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:138252-138319:-1:exon

position:138252:-1
position: 138252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138319:-1
position: 138319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:137402-137548:-1:exon

position:137402:-1
position: 137402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137548:-1
position: 137548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:135849-136759:-1:exon

position:136759:-1
position: 136759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBXN11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: UBXN11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UBX domain-containing protein 11
translation: MEGAAHLELASSLAEKISLLERKIEKQAQEIQLKDGRIAELEEKIKTLQEGEDASASPTTEELEMRCLQLQSQVWEMERFLSDYGLIWVGETQEQLEDTGSVQDGEELPARILCKPGEAVVCKHQIDFDLILEHIKDLNSLVGEGIAEIEQTPRGARLRRTEPLTLTLYQNGIVVGSGALRPYQHPATRQCLQDIMDGYFPSELQPRYPDGVPLQVTDRRDVLFQEPELAGSFPGVGQVVGTSESNKVQENAEIPGPKASLEQVPNKLSKPLKHRGRVGSARAAPQGSDGQQSSEEILVETPGLAGLERVKAAEEAEAAARDFCTLRIRSESGEQRYEVKMLLTDTIGDLRQHLAHIRGGNSDYEIISTFPPRVYTDNSRSLQECGLVPSASLLLRRREPSQQEGRGLQTAP
SIO_010081: UBXN11
subclass of: SO_0000673
so part of: UBXN11
location: complement(join(136594..136759,137402..137548,138252..138319,138517..138608,139670..139790,140617..140694,140988..141205,142492..142606,143041..143117,143973..144027,144669..144763,144972..144978))
location: region:136594-144978:-1
so has part: feature:144972-144978:-1:exon
so has part: feature:144669-144763:-1:exon
so has part: feature:143973-144027:-1:exon
so has part: feature:143041-143117:-1:exon
so has part: feature:142492-142606:-1:exon
so has part: feature:140988-141205:-1:exon
so has part: feature:140617-140694:-1:exon
so has part: feature:139670-139790:-1:exon
so has part: feature:138517-138608:-1:exon
so has part: feature:138252-138319:-1:exon
so has part: feature:137402-137548:-1:exon
so has part: feature:136594-136759:-1:exon

XP_015504982.1
type: Protein
SIO_000068: ncbiprotein

position:136594:-1
position: 136594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144978:-1
position: 144978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144972-144978:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144669-144763:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143973-144027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:143041-143117:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142492-142606:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140988-141205:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140617-140694:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:139670-139790:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:138517-138608:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:138252-138319:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:137402-137548:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:136594-136759:-1:exon

LOC107214114
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214114
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 147434..149115
location: region:147434-149115:1
so has part: feature:147434-149115:1:exon
subclass of: SO_0000011

107214114
type: Gene
SIO_000068: ncbigene

position:147434:1
position: 147434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149115:1
position: 149115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147434-149115:1:exon

LOC107214114
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107214114
product: uncharacterized LOC107214114
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XR_001524882.3
SIO_010081: LOC107214114
subclass of: SO_0000673
so part of: LOC107214114
location: join(147434..147565,148775..149115)
location: region:147434-149115:1
so has part: feature:147434-147565:1:exon
so has part: feature:148775-149115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147434-147565:1:exon

position:147565:1
position: 147565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:148775-149115:1:exon

position:148775:1
position: 148775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRYBG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CRYBG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(149729..158192)
location: region:149729-158192:-1
so has part: feature:149729-158192:-1:exon
subclass of: SO_0000010

107214030
type: Gene
SIO_000068: ncbigene

position:149729:-1
position: 149729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158192:-1
position: 158192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:149729-158192:-1:exon

CRYBG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CRYBG2
product: crystallin beta-gamma domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033519630.1
SIO_010081: CRYBG2
subclass of: SO_0000673
so part of: CRYBG2
location: complement(join(149729..150716,150858..151017,151338..151496,151934..152057,152133..152272,152504..152633,152777..152889,152985..153017,153106..153232,153342..153484,153740..153866,154047..154174,154267..154302,154592..154718,154795..154934,155015..155168,155353..155471,155548..155658,156354..158192))
location: region:149729-158192:-1
so has part: feature:156354-158192:-1:exon
so has part: feature:155548-155658:-1:exon
so has part: feature:155353-155471:-1:exon
so has part: feature:155015-155168:-1:exon
so has part: feature:154795-154934:-1:exon
so has part: feature:154592-154718:-1:exon
so has part: feature:154267-154302:-1:exon
so has part: feature:154047-154174:-1:exon
so has part: feature:153740-153866:-1:exon
so has part: feature:153342-153484:-1:exon
so has part: feature:153106-153232:-1:exon
so has part: feature:152985-153017:-1:exon
so has part: feature:152777-152889:-1:exon
so has part: feature:152504-152633:-1:exon
so has part: feature:152133-152272:-1:exon
so has part: feature:151934-152057:-1:exon
so has part: feature:151338-151496:-1:exon
so has part: feature:150858-151017:-1:exon
so has part: feature:149729-150716:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156354-158192:-1:exon

position:156354:-1
position: 156354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155548-155658:-1:exon

position:155548:-1
position: 155548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155658:-1
position: 155658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:155353-155471:-1:exon

position:155353:-1
position: 155353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155471:-1
position: 155471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:155015-155168:-1:exon

position:155015:-1
position: 155015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155168:-1
position: 155168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:154795-154934:-1:exon

position:154795:-1
position: 154795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154934:-1
position: 154934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:154592-154718:-1:exon

position:154592:-1
position: 154592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154718:-1
position: 154718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:154267-154302:-1:exon

position:154267:-1
position: 154267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154302:-1
position: 154302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:154047-154174:-1:exon

position:154047:-1
position: 154047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154174:-1
position: 154174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:153740-153866:-1:exon

position:153740:-1
position: 153740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153866:-1
position: 153866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:153342-153484:-1:exon

position:153342:-1
position: 153342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153484:-1
position: 153484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:153106-153232:-1:exon

position:153106:-1
position: 153106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153232:-1
position: 153232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:152985-153017:-1:exon

position:152985:-1
position: 152985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153017:-1
position: 153017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:152777-152889:-1:exon

position:152777:-1
position: 152777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152889:-1
position: 152889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:152504-152633:-1:exon

position:152504:-1
position: 152504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152633:-1
position: 152633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:152133-152272:-1:exon

position:152133:-1
position: 152133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152272:-1
position: 152272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:151934-152057:-1:exon

position:151934:-1
position: 151934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152057:-1
position: 152057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:151338-151496:-1:exon

position:151338:-1
position: 151338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151496:-1
position: 151496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:150858-151017:-1:exon

position:150858:-1
position: 150858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151017:-1
position: 151017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:149729-150716:-1:exon

position:150716:-1
position: 150716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRYBG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CRYBG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta/gamma crystallin domain-containing protein 2
translation: MDPPFRHTKSRGFISSAELSMKQGAAGAPEGRSRFQKVSLVSRRLESPGSERGRDGSPSRVSLLLQAWEREIVEKTGSSPSAPTRREHSSSVSLLKDFTAHGPIFSQVYSPAQGPRRQDERGKGGPGRDGSPIPGAAPREVHRESYVHGTLLPTRPAERPAGAPGDAPGAPSAAKPGRVPAVPRARQVTVLRTGRAEGRGAPNGTHGTAGTTAASPQRARPGQDGSGSSAAAAGRESSRAEGSPEEKDSAQAEPAPVSAAAGAGPGDPQTSLTSSPQGPSAGAAGQAEPAVAGEGSVADVDGTVSATPPRTESPPGAASTPENPPSEVSDGPEPSSETAASAEIELDGDETTGDPQSTAQEPESIPEPPTEPPAPEPPAESPPDAAEEDPELLVDMEIFVDTLRNMEPSEMRKAPKAPRQPRQSVLGRCAALPPIHEDRVAPRAPVSLPEALRELLARGPAGRPEETPEEEEEIENPYLSPEERAAAGTLRGVPRDGPAERSVLFRGNVLKGMALLSHFLEQRAAGADEGKPYSRLDKSVLYSRFVSPSAALLELPDSNGATDLPCLGDHNGLSPGGHSGPEMAMLEALTSGSVPPATEEPESTVTLSLDHVLMAAAADVAACSSPARPLGSSQQEDKEGMEKINTRPGKMILYSGAGFAGHKRDIWDDVPDATSWELSHTISIRVIRGGWVMYEKPRFRGRKCVLAEGDVEIDNPWTAYGASGERGGRPFHIGSFKRVVRDYRTPEISLFAEENGEGARLRFSGSAEDTRERGQALAAASIIVHSGLWLLYSKPFFDDDPYVLEPGGYPNLKAWGAKDPSICSLHPIRLGCPVVERPGEPQVLIYEAAAFQGRSFTISRDIYDLKSLAEPALPTVGSLRVLGGCWVGYEKEGFRGHQYLLEEGEYQDWRQWGGYSRELVSLRLIRTDFSDPALVLFEAMDFEEGASVELSEAIPDTRLAGYGSVTQSIHVLSGVWVAYEGPNYSGEQYILEKGVYRNCEDWGATDCHIASAQPILQVREHNLHFVSKILLFSEPDFLGDQVAFEEDQEALPEAFIPRSCRVRGGSWILFDGQDFAGEQHVLSEGEYPTLGAMGCLCSTAIRSLKKVPLFFSEPSIFLHGLECFEGKEIELNSEVRSLQAEGFNNHVLSVRVKGGIWVLCEHGDFRGRQWLLDCTEITNWLTYSGLQHVGSLYPIRQRRIYFRIRSRKLELFLSVPDDVEDMKAGRVVVSSLSEQSSSVWYYEDGLIKNQVAPSMSLQVIGPAGKGAKAVLWSETRMPRQTWSVDSRGRIHSQMFEDMILDVKGGQSYDRDHAIVWDMADERATQIWDIQVL
SIO_010081: CRYBG2
subclass of: SO_0000673
so part of: CRYBG2
location: complement(join(150628..150716,150858..151017,151338..151496,151934..152057,152133..152272,152504..152633,152777..152889,152985..153017,153106..153232,153342..153484,153740..153866,154047..154174,154267..154302,154592..154718,154795..154934,155015..155168,155353..155471,155548..155658,156354..158192))
location: region:150628-158192:-1
so has part: feature:156354-158192:-1:exon
so has part: feature:155548-155658:-1:exon
so has part: feature:155353-155471:-1:exon
so has part: feature:155015-155168:-1:exon
so has part: feature:154795-154934:-1:exon
so has part: feature:154592-154718:-1:exon
so has part: feature:154267-154302:-1:exon
so has part: feature:154047-154174:-1:exon
so has part: feature:153740-153866:-1:exon
so has part: feature:153342-153484:-1:exon
so has part: feature:153106-153232:-1:exon
so has part: feature:152985-153017:-1:exon
so has part: feature:152777-152889:-1:exon
so has part: feature:152504-152633:-1:exon
so has part: feature:152133-152272:-1:exon
so has part: feature:151934-152057:-1:exon
so has part: feature:151338-151496:-1:exon
so has part: feature:150858-151017:-1:exon
so has part: feature:150628-150716:-1:exon

XP_033375521.1
type: Protein
SIO_000068: ncbiprotein

position:150628:-1
position: 150628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156354-158192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:155548-155658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155353-155471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:155015-155168:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:154795-154934:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:154592-154718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:154267-154302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:154047-154174:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:153740-153866:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:153342-153484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153106-153232:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:152985-153017:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152777-152889:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152504-152633:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:152133-152272:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:151934-152057:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:151338-151496:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:150858-151017:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:150628-150716:-1:exon

LIN28A
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LIN28A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 167714..178977
location: region:167714-178977:1
so has part: feature:167714-178977:1:exon
subclass of: SO_0000010

107214122
type: Gene
SIO_000068: ncbigene

position:167714:1
position: 167714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178977:1
position: 178977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167714-178977:1:exon

LIN28A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LIN28A
product: lin-28 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033519612.1
SIO_010081: LIN28A
subclass of: SO_0000673
so part of: LIN28A
location: join(167714..167744,168555..168733,177578..177762,178716..178977)
location: region:167714-178977:1
so has part: feature:167714-167744:1:exon
so has part: feature:168555-168733:1:exon
so has part: feature:177578-177762:1:exon
so has part: feature:178716-178977:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:167714-167744:1:exon

position:167744:1
position: 167744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168555-168733:1:exon

position:168555:1
position: 168555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168733:1
position: 168733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:177578-177762:1:exon

position:177578:1
position: 177578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177762:1
position: 177762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:178716-178977:1:exon

position:178716:1
position: 178716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIN28A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LIN28A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein lin-28 homolog A
translation: MGSVSNQQFAGAKPGEEPAGDSPKAENESQPLHGSGICKWFNVRMGFGFLSMTAKGGATLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLESIRVTGPGGVFCIGSERRPKGKSLQKRRSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVANCPAKAQQSPSSQGKPAYFREEEDMHSSGLLPESRE
SIO_010081: LIN28A
subclass of: SO_0000673
so part of: LIN28A
location: join(167714..167744,168555..168733,177578..177762,178716..178929)
location: region:167714-178929:1
so has part: feature:167714-167744:1:exon
so has part: feature:168555-168733:1:exon
so has part: feature:177578-177762:1:exon
so has part: feature:178716-178929:1:exon

XP_033375503.1
type: Protein
SIO_000068: ncbiprotein

position:178929:1
position: 178929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167714-167744:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168555-168733:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177578-177762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178716-178929:1:exon

DHDDS
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 183427..194765
location: region:183427-194765:1
so has part: feature:183427-194765:1:exon
subclass of: SO_0000010

107214256
type: Gene
SIO_000068: ncbigene

position:183427:1
position: 183427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194765:1
position: 194765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183427-194765:1:exon

DHDDS
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9157
gene: DHDDS
product: dehydrodolichyl diphosphate synthase subunit, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_004500138.1
SIO_010081: DHDDS
so part of: DHDDS
location: join(183427..183499,184450..184533,185304..185420,185943..186085,186695..186811,186989..187090,187746..187860,188968..189075,191892..192133,193835..193890,194544..194765)
location: region:183427-194765:1
so has part: feature:183427-183499:1:exon
so has part: feature:184450-184533:1:exon
so has part: feature:185304-185420:1:exon
so has part: feature:185943-186085:1:exon
so has part: feature:186695-186811:1:exon
so has part: feature:186989-187090:1:exon
so has part: feature:187746-187860:1:exon
so has part: feature:188968-189075:1:exon
so has part: feature:191892-192133:1:exon
so has part: feature:193835-193890:1:exon
so has part: feature:194544-194765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183427-183499:1:exon

position:183499:1
position: 183499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:184450-184533:1:exon

position:184450:1
position: 184450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184533:1
position: 184533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185304-185420:1:exon

position:185304:1
position: 185304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185420:1
position: 185420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:185943-186085:1:exon

position:185943:1
position: 185943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186085:1
position: 186085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:186695-186811:1:exon

position:186695:1
position: 186695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186811:1
position: 186811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:186989-187090:1:exon

position:186989:1
position: 186989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187090:1
position: 187090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:187746-187860:1:exon

position:187746:1
position: 187746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187860:1
position: 187860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:188968-189075:1:exon

position:188968:1
position: 188968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189075:1
position: 189075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:191892-192133:1:exon

position:191892:1
position: 191892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192133:1
position: 192133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:193835-193890:1:exon

position:193835:1
position: 193835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193890:1
position: 193890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:194544-194765:1:exon

position:194544:1
position: 194544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHDDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DHDDS
product: dehydrodolichyl diphosphate synthase subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033519585.1
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: join(183427..183499,184450..184533,185304..185420,185943..186085,186695..186811,186989..187090,187746..187860,188968..189075,191892..192133,193682..194150)
location: region:183427-194150:1
so has part: feature:183427-183499:1:exon
so has part: feature:184450-184533:1:exon
so has part: feature:185304-185420:1:exon
so has part: feature:185943-186085:1:exon
so has part: feature:186695-186811:1:exon
so has part: feature:186989-187090:1:exon
so has part: feature:187746-187860:1:exon
so has part: feature:188968-189075:1:exon
so has part: feature:191892-192133:1:exon
so has part: feature:193682-194150:1:exon

position:194150:1
position: 194150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183427-183499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184450-184533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185304-185420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185943-186085:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186695-186811:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186989-187090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187746-187860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188968-189075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191892-192133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193682-194150:1:exon

position:193682:1
position: 193682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHDDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DHDDS
product: dehydrodolichyl diphosphate synthase subunit, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_033519586.1
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: join(183427..183499,184450..184533,185304..185420,185943..186085,186695..186811,186989..187090,187746..187860,188968..189075,191892..192133,193835..194150)
location: region:183427-194150:1
so has part: feature:183427-183499:1:exon
so has part: feature:184450-184533:1:exon
so has part: feature:185304-185420:1:exon
so has part: feature:185943-186085:1:exon
so has part: feature:186695-186811:1:exon
so has part: feature:186989-187090:1:exon
so has part: feature:187746-187860:1:exon
so has part: feature:188968-189075:1:exon
so has part: feature:191892-192133:1:exon
so has part: feature:193835-194150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183427-183499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184450-184533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185304-185420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185943-186085:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186695-186811:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186989-187090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187746-187860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188968-189075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191892-192133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193835-194150:1:exon

DHDDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DHDDS
product: dehydrodolichyl diphosphate synthase subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_015649473.2
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: join(183427..183499,184450..184533,185304..185420,185943..186085,186695..186811,186989..187090,187746..187860,188968..189075,191892..193628)
location: region:183427-193628:1
so has part: feature:183427-183499:1:exon
so has part: feature:184450-184533:1:exon
so has part: feature:185304-185420:1:exon
so has part: feature:185943-186085:1:exon
so has part: feature:186695-186811:1:exon
so has part: feature:186989-187090:1:exon
so has part: feature:187746-187860:1:exon
so has part: feature:188968-189075:1:exon
so has part: feature:191892-193628:1:exon

position:193628:1
position: 193628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183427-183499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184450-184533:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185304-185420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185943-186085:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186695-186811:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186989-187090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187746-187860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188968-189075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191892-193628:1:exon

DHDDS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DHDDS
product: dehydrodolichyl diphosphate synthase subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_015649474.3
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: join(183474..183499,184455..184533,185304..185420,185943..186085,186695..186811,186989..187090,187746..187860,188968..189075,191892..193628)
location: region:183474-193628:1
so has part: feature:183474-183499:1:exon
so has part: feature:184455-184533:1:exon
so has part: feature:185304-185420:1:exon
so has part: feature:185943-186085:1:exon
so has part: feature:186695-186811:1:exon
so has part: feature:186989-187090:1:exon
so has part: feature:187746-187860:1:exon
so has part: feature:188968-189075:1:exon
so has part: feature:191892-193628:1:exon

position:183474:1
position: 183474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183474-183499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184455-184533:1:exon

position:184455:1
position: 184455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185304-185420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185943-186085:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186695-186811:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186989-187090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187746-187860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:188968-189075:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191892-193628:1:exon

DHDDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrodolichyl diphosphate synthase complex subunit DHDDS
translation: MSWIREGELTIIERFCANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIREVTVYAFSIENFKRSKEEVDGLMDLARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPVDIQELIAQAVLATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILQFQMNYSALQKARDSYLEERRRQQMERDQAYVTQKLQQEGCASHGDSRRRRTLLQKCTALREERIQGFLQALEHKRADFFERLCPVSA
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: join(184471..184533,185304..185420,185943..186085,186695..186811,186989..187090,187746..187860,188968..189075,191892..192128)
location: region:184471-192128:1
so has part: feature:184471-184533:1:exon
so has part: feature:185304-185420:1:exon
so has part: feature:185943-186085:1:exon
so has part: feature:186695-186811:1:exon
so has part: feature:186989-187090:1:exon
so has part: feature:187746-187860:1:exon
so has part: feature:188968-189075:1:exon
so has part: feature:191892-192128:1:exon

XP_033375476.1
type: Protein
SIO_000068: ncbiprotein

position:184471:1
position: 184471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192128:1
position: 192128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184471-184533:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185304-185420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185943-186085:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186695-186811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186989-187090:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187746-187860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188968-189075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191892-192128:1:exon

DHDDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrodolichyl diphosphate synthase complex subunit DHDDS
translation: MSWIREGELTIIERFCANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIREVTVYAFSIENFKRSKEEVDGLMDLARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPVDIQELIAQAVLATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILQFQMNYSALQKARDSYLEERRRQQMERDQAYVTQKLQQEGCASHGDSRRRRTLLQKCTALREERIQGFLQALEHKRADFFERLCPVSA
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: join(184471..184533,185304..185420,185943..186085,186695..186811,186989..187090,187746..187860,188968..189075,191892..192128)
location: region:184471-192128:1
so has part: feature:184471-184533:1:exon
so has part: feature:185304-185420:1:exon
so has part: feature:185943-186085:1:exon
so has part: feature:186695-186811:1:exon
so has part: feature:186989-187090:1:exon
so has part: feature:187746-187860:1:exon
so has part: feature:188968-189075:1:exon
so has part: feature:191892-192128:1:exon

XP_033375477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184471-184533:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185304-185420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185943-186085:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186695-186811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186989-187090:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187746-187860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188968-189075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191892-192128:1:exon

DHDDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrodolichyl diphosphate synthase complex subunit DHDDS
translation: MSWIREGELTIIERFCANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIREVTVYAFSIENFKRSKEEVDGLMDLARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPVDIQELIAQAVLATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILQFQMNYSALQKARDSYLEERRRQQMERDQAYVTQKLQQEGCASHGDSRRRRTLLQKCTALREERIQGFLQALEHKRADFFERLCPVSA
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: join(184471..184533,185304..185420,185943..186085,186695..186811,186989..187090,187746..187860,188968..189075,191892..192128)
location: region:184471-192128:1
so has part: feature:184471-184533:1:exon
so has part: feature:185304-185420:1:exon
so has part: feature:185943-186085:1:exon
so has part: feature:186695-186811:1:exon
so has part: feature:186989-187090:1:exon
so has part: feature:187746-187860:1:exon
so has part: feature:188968-189075:1:exon
so has part: feature:191892-192128:1:exon

XP_015504959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184471-184533:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185304-185420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185943-186085:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186695-186811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186989-187090:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187746-187860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188968-189075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191892-192128:1:exon

DHDDS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DHDDS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dehydrodolichyl diphosphate synthase complex subunit DHDDS
translation: MSWIREGELTIIERFCANIIKAGPMPKHVAFIMDGNRRYAQKCHVERQQGHSQGFDKLAQTLRWCLNLGIREVTVYAFSIENFKRSKEEVDGLMDLARQKFSRLLEEQENLKKHGVCIRVLGDLPLLPVDIQELIAQAVLATRNYNKCFLNVCFAYTSRHEISNAVREMAWGVEQGLLEPSDVSESLLDKCLYTNNSPDPDLLIRTSGEVRLSDFLLWQTSHSCLVFQSVLWPEYSFWNLCEAILQFQMNYSALQKARDSYLEERRRQQMERDQAYVTQKLQQEGCASHGDSRRRRTLLQKCTALREERIQGFLQALEHKRADFFERLCPVSA
SIO_010081: DHDDS
subclass of: SO_0000673
so part of: DHDDS
location: join(184471..184533,185304..185420,185943..186085,186695..186811,186989..187090,187746..187860,188968..189075,191892..192128)
location: region:184471-192128:1
so has part: feature:184471-184533:1:exon
so has part: feature:185304-185420:1:exon
so has part: feature:185943-186085:1:exon
so has part: feature:186695-186811:1:exon
so has part: feature:186989-187090:1:exon
so has part: feature:187746-187860:1:exon
so has part: feature:188968-189075:1:exon
so has part: feature:191892-192128:1:exon

XP_015504960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184471-184533:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185304-185420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185943-186085:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:186695-186811:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:186989-187090:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:187746-187860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:188968-189075:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:191892-192128:1:exon

HMGN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: HMGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <195823..198639
location: region:195823-198639:1
so has part: feature:195823-198639:1:exon
subclass of: SO_0000010

107214014
type: Gene
SIO_000068: ncbigene

position:195823:1
position: 195823
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:198639:1
position: 198639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195823-198639:1:exon

HMGN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: HMGN2
product: high mobility group nucleosomal binding domain 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_015649020.1
SIO_010081: HMGN2
subclass of: SO_0000673
so part of: HMGN2
location: join(<195823..195915,196288..196317,196887..196937,197249..197344,197769..198639)
location: region:195823-198639:1
so has part: feature:195823-195915:1:exon
so has part: feature:196288-196317:1:exon
so has part: feature:196887-196937:1:exon
so has part: feature:197249-197344:1:exon
so has part: feature:197769-198639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195823-195915:1:exon

position:195915:1
position: 195915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196288-196317:1:exon

position:196288:1
position: 196288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196317:1
position: 196317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196887-196937:1:exon

position:196887:1
position: 196887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196937:1
position: 196937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197249-197344:1:exon

position:197249:1
position: 197249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197344:1
position: 197344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197769-198639:1:exon

position:197769:1
position: 197769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMGN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: HMGN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-histone chromosomal protein HMG-17
translation: RILSITCPYNLCPCPQAEGETKGDKAKVKDEPQRRSARLSAKPAPPKPEPKPKKAAPKKSEKVPKGKKGKADAGKEGNNPAENGDAKTDQAQKAEGAGEAK
SIO_010081: HMGN2
subclass of: SO_0000673
so part of: HMGN2
location: join(<195823..195915,196288..196317,196887..196937,197249..197344,197769..197804)
location: region:195823-197804:1
so has part: feature:195823-195915:1:exon
so has part: feature:196288-196317:1:exon
so has part: feature:196887-196937:1:exon
so has part: feature:197249-197344:1:exon
so has part: feature:197769-197804:1:exon

XP_015504506.1
type: Protein
SIO_000068: ncbiprotein

position:197804:1
position: 197804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195823-195915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196288-196317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196887-196937:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197249-197344:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197769-197804:1:exon

RPS6KA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: RPS6KA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 229335..253759
location: region:229335-253759:1
so has part: feature:229335-253759:1:exon
subclass of: SO_0000010

107214031
type: Gene
SIO_000068: ncbigene

position:229335:1
position: 229335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253759:1
position: 253759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229335-253759:1:exon

RPS6KA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RPS6KA1
product: ribosomal protein S6 kinase A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033519631.1
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: join(229335..229570,231057..231106,231909..231962,236452..236568,239568..239649,242292..242372,242892..242971,243713..244023,244126..244130,245701..245875,246052..246140,246327..246391,246690..246792,247236..247363,247802..247927,248439..248528,248994..249152,249373..249534,249830..249906,250027..250144,250544..250681,250925..253759)
location: region:229335-253759:1
so has part: feature:229335-229570:1:exon
so has part: feature:231057-231106:1:exon
so has part: feature:231909-231962:1:exon
so has part: feature:236452-236568:1:exon
so has part: feature:239568-239649:1:exon
so has part: feature:242292-242372:1:exon
so has part: feature:242892-242971:1:exon
so has part: feature:243713-244023:1:exon
so has part: feature:244126-244130:1:exon
so has part: feature:245701-245875:1:exon
so has part: feature:246052-246140:1:exon
so has part: feature:246327-246391:1:exon
so has part: feature:246690-246792:1:exon
so has part: feature:247236-247363:1:exon
so has part: feature:247802-247927:1:exon
so has part: feature:248439-248528:1:exon
so has part: feature:248994-249152:1:exon
so has part: feature:249373-249534:1:exon
so has part: feature:249830-249906:1:exon
so has part: feature:250027-250144:1:exon
so has part: feature:250544-250681:1:exon
so has part: feature:250925-253759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:229335-229570:1:exon

position:229570:1
position: 229570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:231057-231106:1:exon

position:231057:1
position: 231057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231106:1
position: 231106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231909-231962:1:exon

position:231909:1
position: 231909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231962:1
position: 231962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236452-236568:1:exon

position:236452:1
position: 236452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236568:1
position: 236568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:239568-239649:1:exon

position:239568:1
position: 239568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239649:1
position: 239649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:242292-242372:1:exon

position:242292:1
position: 242292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242372:1
position: 242372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:242892-242971:1:exon

position:242892:1
position: 242892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242971:1
position: 242971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:243713-244023:1:exon

position:243713:1
position: 243713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244023:1
position: 244023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:244126-244130:1:exon

position:244126:1
position: 244126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244130:1
position: 244130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:245701-245875:1:exon

position:245701:1
position: 245701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245875:1
position: 245875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:246052-246140:1:exon

position:246052:1
position: 246052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246140:1
position: 246140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:246327-246391:1:exon

position:246327:1
position: 246327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246391:1
position: 246391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:246690-246792:1:exon

position:246690:1
position: 246690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:246792:1
position: 246792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:247236-247363:1:exon

position:247236:1
position: 247236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247363:1
position: 247363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:247802-247927:1:exon

position:247802:1
position: 247802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247927:1
position: 247927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:248439-248528:1:exon

position:248439:1
position: 248439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248528:1
position: 248528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:248994-249152:1:exon

position:248994:1
position: 248994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249152:1
position: 249152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:249373-249534:1:exon

position:249373:1
position: 249373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249534:1
position: 249534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:249830-249906:1:exon

position:249830:1
position: 249830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:249906:1
position: 249906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:250027-250144:1:exon

position:250027:1
position: 250027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250144:1
position: 250144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:250544-250681:1:exon

position:250544:1
position: 250544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:250681:1
position: 250681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:250925-253759:1:exon

position:250925:1
position: 250925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS6KA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RPS6KA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-1
translation: MERDPKLPRLWAFLSLWLQRRHRAKPCSLQLPVPSQLCAPVSTAATASPPAAARCFLLSPLWAAPLALPSGIDSLEMLRLLFRSKPRIQEAKPDITWIEKDLVGSADKGEGVVQEINITHHVKEGSEKADPSQFELLKVLGQGSFGKVFLVRKITAPDSNHLYAMKVLKKATLKVRDRLRTKIERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPEKYVWPAGGGCQPCSQPSLQSGNSFHLAEGLEDALGPDRWEVVVPVQGCCSSELCVPQAEQRSVAASRLQGELCHSQPWDPSQAGRDLCDPEPRSDMTPLLLFPSQFEMLTGALPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHPFYSTIDWNKLYRREIKPPFKPAVGQPDDTFYFDTEFTSRTPKDSPGVPPSAGAHQLFRGFSFVATGLMEDGKVKAAQPPLHSVVQQLHGKNVQFSDGYVVKEAIGVGSYSVCKRCIHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKYVYLVTELMRGGELLDKILRQKFFSEREASSVLHMICKTVEYLHSQGVVHRDLKPSNILYVDKSGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGVLLYTMLAGCTPFANGPGDTPEEILTRIGGGKFSISGGNWDTISDMAKDLVSKMLHVDPHQRLTAKQVLQHPWITQKDSLPQSQLNHQDIQLVKGAMAATYSALNSSKPSPQLKPIESSILAQRRVKKLPSTTL
SIO_010081: RPS6KA1
subclass of: SO_0000673
so part of: RPS6KA1
location: join(229351..229570,231057..231106,231909..231962,236452..236568,239568..239649,242292..242372,242892..242971,243713..244023,244126..244130,245701..245875,246052..246140,246327..246391,246690..246792,247236..247363,247802..247927,248439..248528,248994..249152,249373..249534,249830..249906,250027..250144,250544..250681,250925..251047)
location: region:229351-251047:1
so has part: feature:229351-229570:1:exon
so has part: feature:231057-231106:1:exon
so has part: feature:231909-231962:1:exon
so has part: feature:236452-236568:1:exon
so has part: feature:239568-239649:1:exon
so has part: feature:242292-242372:1:exon
so has part: feature:242892-242971:1:exon
so has part: feature:243713-244023:1:exon
so has part: feature:244126-244130:1:exon
so has part: feature:245701-245875:1:exon
so has part: feature:246052-246140:1:exon
so has part: feature:246327-246391:1:exon
so has part: feature:246690-246792:1:exon
so has part: feature:247236-247363:1:exon
so has part: feature:247802-247927:1:exon
so has part: feature:248439-248528:1:exon
so has part: feature:248994-249152:1:exon
so has part: feature:249373-249534:1:exon
so has part: feature:249830-249906:1:exon
so has part: feature:250027-250144:1:exon
so has part: feature:250544-250681:1:exon
so has part: feature:250925-251047:1:exon

XP_033375522.1
type: Protein
SIO_000068: ncbiprotein

position:229351:1
position: 229351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251047:1
position: 251047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229351-229570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231057-231106:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231909-231962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:236452-236568:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:239568-239649:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:242292-242372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:242892-242971:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:243713-244023:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:244126-244130:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:245701-245875:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:246052-246140:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:246327-246391:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:246690-246792:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:247236-247363:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:247802-247927:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:248439-248528:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:248994-249152:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:249373-249534:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:249830-249906:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:250027-250144:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:250544-250681:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:250925-251047:1:exon

LOC117245460
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117245460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 264629..278279
location: region:264629-278279:1
so has part: feature:264629-278279:1:exon
subclass of: SO_0000011

117245460
type: Gene
SIO_000068: ncbigene

position:264629:1
position: 264629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278279:1
position: 278279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264629-278279:1:exon

LOC117245460
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC117245460
product: uncharacterized LOC117245460, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004500174.1
SIO_010081: LOC117245460
subclass of: SO_0000673
so part of: LOC117245460
location: join(264629..266112,268217..273938,276592..277015)
location: region:264629-277015:1
so has part: feature:264629-266112:1:exon
so has part: feature:268217-273938:1:exon
so has part: feature:276592-277015:1:exon

position:277015:1
position: 277015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264629-266112:1:exon

position:266112:1
position: 266112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268217-273938:1:exon

position:268217:1
position: 268217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273938:1
position: 273938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276592-277015:1:exon

position:276592:1
position: 276592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117245460
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC117245460
product: uncharacterized LOC117245460, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004500173.1
SIO_010081: LOC117245460
subclass of: SO_0000673
so part of: LOC117245460
location: join(266119..273938,276592..276744,277592..278279)
location: region:266119-278279:1
so has part: feature:266119-273938:1:exon
so has part: feature:276592-276744:1:exon
so has part: feature:277592-278279:1:exon

position:266119:1
position: 266119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266119-273938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276592-276744:1:exon

position:276744:1
position: 276744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:277592-278279:1:exon

position:277592:1
position: 277592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117245460
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC117245460
product: uncharacterized LOC117245460, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004500172.1
SIO_010081: LOC117245460
subclass of: SO_0000673
so part of: LOC117245460
location: join(266119..273938,276592..276744,277595..278279)
location: region:266119-278279:1
so has part: feature:266119-273938:1:exon
so has part: feature:276592-276744:1:exon
so has part: feature:277595-278279:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266119-273938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276592-276744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277595-278279:1:exon

position:277595:1
position: 277595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117245460
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC117245460
product: uncharacterized LOC117245460, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004500171.1
SIO_010081: LOC117245460
subclass of: SO_0000673
so part of: LOC117245460
location: join(266119..273938,276592..276744,277300..277519)
location: region:266119-277519:1
so has part: feature:266119-273938:1:exon
so has part: feature:276592-276744:1:exon
so has part: feature:277300-277519:1:exon

position:277519:1
position: 277519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266119-273938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276592-276744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:277300-277519:1:exon

position:277300:1
position: 277300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117245460
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC117245460
product: uncharacterized LOC117245460, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004500170.1
SIO_010081: LOC117245460
subclass of: SO_0000673
so part of: LOC117245460
location: join(266119..273938,276592..277015)
location: region:266119-277015:1
so has part: feature:266119-273938:1:exon
so has part: feature:276592-277015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266119-273938:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276592-277015:1:exon

ARID1A
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ARID1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 303557..337083
location: region:303557-337083:1
so has part: feature:303557-337083:1:exon
subclass of: SO_0000010

107214167
type: Gene
SIO_000068: ncbigene

position:303557:1
position: 303557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:337083:1
position: 337083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303557-337083:1:exon

ARID1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ARID1A
product: AT-rich interaction domain 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033519624.1
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: join(303557..303800,304465..304950,305509..305622,318971..319211,319519..319608,320230..320397,321032..321329,322951..323096,323180..323289,324192..324398,324873..325080,328850..328982,329263..329435,329571..329721,330467..330598,330678..330774,332455..333313,333639..333769,334128..337083)
location: region:303557-337083:1
so has part: feature:303557-303800:1:exon
so has part: feature:304465-304950:1:exon
so has part: feature:305509-305622:1:exon
so has part: feature:318971-319211:1:exon
so has part: feature:319519-319608:1:exon
so has part: feature:320230-320397:1:exon
so has part: feature:321032-321329:1:exon
so has part: feature:322951-323096:1:exon
so has part: feature:323180-323289:1:exon
so has part: feature:324192-324398:1:exon
so has part: feature:324873-325080:1:exon
so has part: feature:328850-328982:1:exon
so has part: feature:329263-329435:1:exon
so has part: feature:329571-329721:1:exon
so has part: feature:330467-330598:1:exon
so has part: feature:330678-330774:1:exon
so has part: feature:332455-333313:1:exon
so has part: feature:333639-333769:1:exon
so has part: feature:334128-337083:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:303557-303800:1:exon

position:303800:1
position: 303800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:304465-304950:1:exon

position:304465:1
position: 304465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304950:1
position: 304950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305509-305622:1:exon

position:305509:1
position: 305509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305622:1
position: 305622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:318971-319211:1:exon

position:318971:1
position: 318971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319211:1
position: 319211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:319519-319608:1:exon

position:319519:1
position: 319519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319608:1
position: 319608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:320230-320397:1:exon

position:320230:1
position: 320230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320397:1
position: 320397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:321032-321329:1:exon

position:321032:1
position: 321032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321329:1
position: 321329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:322951-323096:1:exon

position:322951:1
position: 322951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323096:1
position: 323096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:323180-323289:1:exon

position:323180:1
position: 323180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:323289:1
position: 323289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:324192-324398:1:exon

position:324192:1
position: 324192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324398:1
position: 324398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:324873-325080:1:exon

position:324873:1
position: 324873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325080:1
position: 325080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:328850-328982:1:exon

position:328850:1
position: 328850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328982:1
position: 328982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:329263-329435:1:exon

position:329263:1
position: 329263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329435:1
position: 329435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:329571-329721:1:exon

position:329571:1
position: 329571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329721:1
position: 329721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:330467-330598:1:exon

position:330467:1
position: 330467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330598:1
position: 330598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:330678-330774:1:exon

position:330678:1
position: 330678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330774:1
position: 330774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:332455-333313:1:exon

position:332455:1
position: 332455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333313:1
position: 333313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:333639-333769:1:exon

position:333639:1
position: 333639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333769:1
position: 333769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:334128-337083:1:exon

position:334128:1
position: 334128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARID1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ARID1A
product: AT-rich interaction domain 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_033519623.1
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: join(303558..303800,304465..304950,305509..305622,318971..319211,319519..319608,320230..320397,321032..321329,322951..323096,323180..323289,324189..324398,324873..325080,328850..328982,329263..329435,329571..329721,330467..330598,330678..330774,332455..333313,333639..333769,334128..337083)
location: region:303558-337083:1
so has part: feature:303558-303800:1:exon
so has part: feature:304465-304950:1:exon
so has part: feature:305509-305622:1:exon
so has part: feature:318971-319211:1:exon
so has part: feature:319519-319608:1:exon
so has part: feature:320230-320397:1:exon
so has part: feature:321032-321329:1:exon
so has part: feature:322951-323096:1:exon
so has part: feature:323180-323289:1:exon
so has part: feature:324189-324398:1:exon
so has part: feature:324873-325080:1:exon
so has part: feature:328850-328982:1:exon
so has part: feature:329263-329435:1:exon
so has part: feature:329571-329721:1:exon
so has part: feature:330467-330598:1:exon
so has part: feature:330678-330774:1:exon
so has part: feature:332455-333313:1:exon
so has part: feature:333639-333769:1:exon
so has part: feature:334128-337083:1:exon

position:303558:1
position: 303558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303558-303800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304465-304950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305509-305622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318971-319211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319519-319608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320230-320397:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321032-321329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:322951-323096:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:323180-323289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:324189-324398:1:exon

position:324189:1
position: 324189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:324873-325080:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:328850-328982:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:329263-329435:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:329571-329721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:330467-330598:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:330678-330774:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:332455-333313:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:333639-333769:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:334128-337083:1:exon

ARID1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ARID1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 1A isoform X1
translation: MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQATQRYPMAMQSRTQSTMGSISYAQQMPPYGQQGPGAYGQQSQTPYYNQQSPHPQQQQPPYPQQPPAQPSHSQPSYQQQQQQQQQQQQQQQAAQPPAPALPSAQPAYSQQQQQQQQQPPSPYPQQPAPQHPQSQPPYPQQQSQSPYQQQQAQQPAAPSGLAQPSSSYAPAQPPQQPSAYSQQRFPPPQELSQDSFGSQASSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDTILHPSMNQSSIAQDRGYLQRNPQMPQYSSPQPGSALSPRQSSGAQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNASYPSPGMGGSINPLHGQSGVPPYSGLPPGRMGHAAMGSRPYGPNMGSIPPQVGSGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGAPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKLWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSYGAPYDRVRTEPGMGAEGSLGSGTPQPSILPSTPESGMYSPSRYPQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGLPAKRHEGELYNVPYSSGQAQPQQQLPPAQPQQPSQQPPAQPSPQQDLYNQYGSTYPAERRAGQSQFPFQFGRERVSAGAGAQQNIPPQMMGGPIQPAPEGPQQGALWQGRNELGYGSYPNRQSSGAAPQGPAYHGVARTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSPEEGEEDDEPRSLNCEEEEEDEEEEEAAFSSKDKVPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELPLPHKRASCSSALRKRSAAESNPSPREGEAPAPDGSSEKRITATMDDMLSARPGSLAGEEEEVKASETAKESSKFPFVISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQSPPFEATSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: join(303600..303800,304465..304950,305509..305622,318971..319211,319519..319608,320230..320397,321032..321329,322951..323096,323180..323289,324189..324398,324873..325080,328850..328982,329263..329435,329571..329721,330467..330598,330678..330774,332455..333313,333639..333769,334128..335852)
location: region:303600-335852:1
so has part: feature:303600-303800:1:exon
so has part: feature:304465-304950:1:exon
so has part: feature:305509-305622:1:exon
so has part: feature:318971-319211:1:exon
so has part: feature:319519-319608:1:exon
so has part: feature:320230-320397:1:exon
so has part: feature:321032-321329:1:exon
so has part: feature:322951-323096:1:exon
so has part: feature:323180-323289:1:exon
so has part: feature:324189-324398:1:exon
so has part: feature:324873-325080:1:exon
so has part: feature:328850-328982:1:exon
so has part: feature:329263-329435:1:exon
so has part: feature:329571-329721:1:exon
so has part: feature:330467-330598:1:exon
so has part: feature:330678-330774:1:exon
so has part: feature:332455-333313:1:exon
so has part: feature:333639-333769:1:exon
so has part: feature:334128-335852:1:exon

XP_033375514.1
type: Protein
SIO_000068: ncbiprotein

position:303600:1
position: 303600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335852:1
position: 335852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:303600-303800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304465-304950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305509-305622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318971-319211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319519-319608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320230-320397:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321032-321329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:322951-323096:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:323180-323289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:324189-324398:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:324873-325080:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:328850-328982:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:329263-329435:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:329571-329721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:330467-330598:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:330678-330774:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:332455-333313:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:333639-333769:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:334128-335852:1:exon

ARID1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ARID1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-rich interactive domain-containing protein 1A isoform X2
translation: MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQATQRYPMAMQSRTQSTMGSISYAQQMPPYGQQGPGAYGQQSQTPYYNQQSPHPQQQQPPYPQQPPAQPSHSQPSYQQQQQQQQQQQQQQQAAQPPAPALPSAQPAYSQQQQQQQQQPPSPYPQQPAPQHPQSQPPYPQQQSQSPYQQQQAQQPAAPSGLAQPSSSYAPAQPPQQPSAYSQQRFPPPQELSQDSFGSQASSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDTILHPSMNQSSIAQDRGYLQRNPQMPQYSSPQPGSALSPRQSSGAQMHAGMGPYQQNSMGSYGPQGGQYGPQGGYPRQPNYNAMSNASYPSPGMGGSINPLHGQSGVPPYSGLPPGRMGHAAMGSRPYGPNMGSIPPQVGSGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQGGMMGTGAPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATKMNNKADGTPKAESKSKSSSSTTTNEKITKLYELGGEPERKLWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSYGAPYDRVRTEPGMGAEGSLGSGTPQPSILPSTPESGMYSPSRYPQQQQQQQRHDSYGNQFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGLPAKRHEGELYNVPYSSGQAQPQQQLPPAQPQQPSQQPPAQPSPQQDLYNQYGSTYPAERRAGQSQFPFQFGRERVSAGAGAQQNIPPQMMGGPIQPAPEGPQQGALWQGRNELGYGSYPNRQSSGAAPQGPAYHGVARTDEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSPEEGEEDDEPRSLNCEEEEEDEEEEEAAFSSKDKVPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHFESKTELPLPHKRASCSSALRKRSAAESNPSPREGEAPAPDGSSEKRITATMDDMLSARPGSLAGEEEEVKASETAKESSKFPFVISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMHMQSPPFEATSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
SIO_010081: ARID1A
subclass of: SO_0000673
so part of: ARID1A
location: join(303600..303800,304465..304950,305509..305622,318971..319211,319519..319608,320230..320397,321032..321329,322951..323096,323180..323289,324192..324398,324873..325080,328850..328982,329263..329435,329571..329721,330467..330598,330678..330774,332455..333313,333639..333769,334128..335852)
location: region:303600-335852:1
so has part: feature:303600-303800:1:exon
so has part: feature:304465-304950:1:exon
so has part: feature:305509-305622:1:exon
so has part: feature:318971-319211:1:exon
so has part: feature:319519-319608:1:exon
so has part: feature:320230-320397:1:exon
so has part: feature:321032-321329:1:exon
so has part: feature:322951-323096:1:exon
so has part: feature:323180-323289:1:exon
so has part: feature:324192-324398:1:exon
so has part: feature:324873-325080:1:exon
so has part: feature:328850-328982:1:exon
so has part: feature:329263-329435:1:exon
so has part: feature:329571-329721:1:exon
so has part: feature:330467-330598:1:exon
so has part: feature:330678-330774:1:exon
so has part: feature:332455-333313:1:exon
so has part: feature:333639-333769:1:exon
so has part: feature:334128-335852:1:exon

XP_033375515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:303600-303800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304465-304950:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305509-305622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:318971-319211:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:319519-319608:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:320230-320397:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:321032-321329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:322951-323096:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:323180-323289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:324192-324398:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:324873-325080:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:328850-328982:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:329263-329435:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:329571-329721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:330467-330598:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:330678-330774:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:332455-333313:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:333639-333769:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:334128-335852:1:exon

PIGV
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 338998..344539
location: region:338998-344539:1
so has part: feature:338998-344539:1:exon
subclass of: SO_0000010

107213994
type: Gene
SIO_000068: ncbigene

position:338998:1
position: 338998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344539:1
position: 344539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338998-344539:1:exon

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_015648975.3
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(338998..339126,340431..343867,343954..344539)
location: region:338998-344539:1
so has part: feature:338998-339126:1:exon
so has part: feature:340431-343867:1:exon
so has part: feature:343954-344539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338998-339126:1:exon

position:339126:1
position: 339126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:340431-343867:1:exon

position:340431:1
position: 340431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343867:1
position: 343867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:343954-344539:1:exon

position:343954:1
position: 343954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015648976.3
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(338999..339126,340431..340540,341986..342143,342716..343867,343954..344539)
location: region:338999-344539:1
so has part: feature:338999-339126:1:exon
so has part: feature:340431-340540:1:exon
so has part: feature:341986-342143:1:exon
so has part: feature:342716-343867:1:exon
so has part: feature:343954-344539:1:exon

position:338999:1
position: 338999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338999-339126:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340431-340540:1:exon

position:340540:1
position: 340540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341986-342143:1:exon

position:341986:1
position: 341986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342143:1
position: 342143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:342716-343867:1:exon

position:342716:1
position: 342716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:343954-344539:1:exon

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_033519610.1
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(338999..339126,340431..340540,341991..342143,342716..343867,343954..344539)
location: region:338999-344539:1
so has part: feature:338999-339126:1:exon
so has part: feature:340431-340540:1:exon
so has part: feature:341991-342143:1:exon
so has part: feature:342716-343867:1:exon
so has part: feature:343954-344539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338999-339126:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340431-340540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341991-342143:1:exon

position:341991:1
position: 341991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:342716-343867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343954-344539:1:exon

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_015648977.3
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(338999..339126,341986..342143,342716..343867,343954..344539)
location: region:338999-344539:1
so has part: feature:338999-339126:1:exon
so has part: feature:341986-342143:1:exon
so has part: feature:342716-343867:1:exon
so has part: feature:343954-344539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338999-339126:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341986-342143:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:342716-343867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343954-344539:1:exon

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033519611.1
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(338999..339126,341991..342143,342716..343867,343954..344539)
location: region:338999-344539:1
so has part: feature:338999-339126:1:exon
so has part: feature:341991-342143:1:exon
so has part: feature:342716-343867:1:exon
so has part: feature:343954-344539:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:338999-339126:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341991-342143:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:342716-343867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343954-344539:1:exon

PIGV
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PIGV
product: phosphatidylinositol glycan anchor biosynthesis class V, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_033519609.1
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(340203..343867,343954..344539)
location: region:340203-344539:1
so has part: feature:340203-343867:1:exon
so has part: feature:343954-344539:1:exon

position:340203:1
position: 340203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340203-343867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343954-344539:1:exon

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2 isoform X2
translation: MELWSRADPQLREVVWFALRCRALALLLQAVFNLLIPDHAADAFSPPRPATQGPWDALVERLLGGLGRWDAEHFVFIAERGYLLEHNCAFLPLFPLCLRALAGLLPWASQLQPRSRLLLSAALLNALLAPLAAAALLGLGRAVLRQPRQAFLAALLFSVSPAGVFMAAAYSESAFAFLAFSAMWQLEQGHSTLGTLLFSLASGARANGLLNAGFVLYARGKRFALRLQLGSAAPRTLPWLGKQLLSLASSAALACAGIFLPFALFQYYAYLRFCGPGTDLGQAIPEPLLQLARDKGYRVAGVAGEKPPWCSQRFPVVYSYIQDTYWNVGFLRYFELRQIPNFLLALPITLLGSWAAWTYVSTNPWHCLTLGLVRSKSGERGKARDGFCGPAVFVYVVHSTALLVFGFFCMHVQVLTRFLGSSSPILYWFAAYLLQEHEPLLWSTGTDNPTSGKPLLGKPPSSRGKGTSDNPVVRLLLNWRSITPLSKSILGFFLGYWLLGLILHCNFLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(342057..342143,342716..343867,343954..344250)
location: region:342057-344250:1
so has part: feature:342057-342143:1:exon
so has part: feature:342716-343867:1:exon
so has part: feature:343954-344250:1:exon

XP_033375501.1
type: Protein
SIO_000068: ncbiprotein

position:342057:1
position: 342057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344250:1
position: 344250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342057-342143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:342716-343867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343954-344250:1:exon

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2 isoform X2
translation: MELWSRADPQLREVVWFALRCRALALLLQAVFNLLIPDHAADAFSPPRPATQGPWDALVERLLGGLGRWDAEHFVFIAERGYLLEHNCAFLPLFPLCLRALAGLLPWASQLQPRSRLLLSAALLNALLAPLAAAALLGLGRAVLRQPRQAFLAALLFSVSPAGVFMAAAYSESAFAFLAFSAMWQLEQGHSTLGTLLFSLASGARANGLLNAGFVLYARGKRFALRLQLGSAAPRTLPWLGKQLLSLASSAALACAGIFLPFALFQYYAYLRFCGPGTDLGQAIPEPLLQLARDKGYRVAGVAGEKPPWCSQRFPVVYSYIQDTYWNVGFLRYFELRQIPNFLLALPITLLGSWAAWTYVSTNPWHCLTLGLVRSKSGERGKARDGFCGPAVFVYVVHSTALLVFGFFCMHVQVLTRFLGSSSPILYWFAAYLLQEHEPLLWSTGTDNPTSGKPLLGKPPSSRGKGTSDNPVVRLLLNWRSITPLSKSILGFFLGYWLLGLILHCNFLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(342057..342143,342716..343867,343954..344250)
location: region:342057-344250:1
so has part: feature:342057-342143:1:exon
so has part: feature:342716-343867:1:exon
so has part: feature:343954-344250:1:exon

XP_033375502.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342057-342143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:342716-343867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343954-344250:1:exon

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2 isoform X2
translation: MELWSRADPQLREVVWFALRCRALALLLQAVFNLLIPDHAADAFSPPRPATQGPWDALVERLLGGLGRWDAEHFVFIAERGYLLEHNCAFLPLFPLCLRALAGLLPWASQLQPRSRLLLSAALLNALLAPLAAAALLGLGRAVLRQPRQAFLAALLFSVSPAGVFMAAAYSESAFAFLAFSAMWQLEQGHSTLGTLLFSLASGARANGLLNAGFVLYARGKRFALRLQLGSAAPRTLPWLGKQLLSLASSAALACAGIFLPFALFQYYAYLRFCGPGTDLGQAIPEPLLQLARDKGYRVAGVAGEKPPWCSQRFPVVYSYIQDTYWNVGFLRYFELRQIPNFLLALPITLLGSWAAWTYVSTNPWHCLTLGLVRSKSGERGKARDGFCGPAVFVYVVHSTALLVFGFFCMHVQVLTRFLGSSSPILYWFAAYLLQEHEPLLWSTGTDNPTSGKPLLGKPPSSRGKGTSDNPVVRLLLNWRSITPLSKSILGFFLGYWLLGLILHCNFLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(342057..342143,342716..343867,343954..344250)
location: region:342057-344250:1
so has part: feature:342057-342143:1:exon
so has part: feature:342716-343867:1:exon
so has part: feature:343954-344250:1:exon

XP_015504462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342057-342143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:342716-343867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343954-344250:1:exon

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2 isoform X2
translation: MELWSRADPQLREVVWFALRCRALALLLQAVFNLLIPDHAADAFSPPRPATQGPWDALVERLLGGLGRWDAEHFVFIAERGYLLEHNCAFLPLFPLCLRALAGLLPWASQLQPRSRLLLSAALLNALLAPLAAAALLGLGRAVLRQPRQAFLAALLFSVSPAGVFMAAAYSESAFAFLAFSAMWQLEQGHSTLGTLLFSLASGARANGLLNAGFVLYARGKRFALRLQLGSAAPRTLPWLGKQLLSLASSAALACAGIFLPFALFQYYAYLRFCGPGTDLGQAIPEPLLQLARDKGYRVAGVAGEKPPWCSQRFPVVYSYIQDTYWNVGFLRYFELRQIPNFLLALPITLLGSWAAWTYVSTNPWHCLTLGLVRSKSGERGKARDGFCGPAVFVYVVHSTALLVFGFFCMHVQVLTRFLGSSSPILYWFAAYLLQEHEPLLWSTGTDNPTSGKPLLGKPPSSRGKGTSDNPVVRLLLNWRSITPLSKSILGFFLGYWLLGLILHCNFLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(342057..342143,342716..343867,343954..344250)
location: region:342057-344250:1
so has part: feature:342057-342143:1:exon
so has part: feature:342716-343867:1:exon
so has part: feature:343954-344250:1:exon

XP_015504463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342057-342143:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:342716-343867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343954-344250:1:exon

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2 isoform X1
translation: MLAVPLLCSDVKPQKVVLAPFHSLVGSFSHSPERVWPRCQPGPLSEPSGAECSASLQLCVVFQAVFNLLIPDHAADAFSPPRPATQGPWDALVERLLGGLGRWDAEHFVFIAERGYLLEHNCAFLPLFPLCLRALAGLLPWASQLQPRSRLLLSAALLNALLAPLAAAALLGLGRAVLRQPRQAFLAALLFSVSPAGVFMAAAYSESAFAFLAFSAMWQLEQGHSTLGTLLFSLASGARANGLLNAGFVLYARGKRFALRLQLGSAAPRTLPWLGKQLLSLASSAALACAGIFLPFALFQYYAYLRFCGPGTDLGQAIPEPLLQLARDKGYRVAGVAGEKPPWCSQRFPVVYSYIQDTYWNVGFLRYFELRQIPNFLLALPITLLGSWAAWTYVSTNPWHCLTLGLVRSKSGERGKARDGFCGPAVFVYVVHSTALLVFGFFCMHVQVLTRFLGSSSPILYWFAAYLLQEHEPLLWSTGTDNPTSGKPLLGKPPSSRGKGTSDNPVVRLLLNWRSITPLSKSILGFFLGYWLLGLILHCNFLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(342527..343867,343954..344250)
location: region:342527-344250:1
so has part: feature:342527-343867:1:exon
so has part: feature:343954-344250:1:exon

XP_033375500.1
type: Protein
SIO_000068: ncbiprotein

position:342527:1
position: 342527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342527-343867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343954-344250:1:exon

PIGV
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PIGV
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 2 isoform X1
translation: MLAVPLLCSDVKPQKVVLAPFHSLVGSFSHSPERVWPRCQPGPLSEPSGAECSASLQLCVVFQAVFNLLIPDHAADAFSPPRPATQGPWDALVERLLGGLGRWDAEHFVFIAERGYLLEHNCAFLPLFPLCLRALAGLLPWASQLQPRSRLLLSAALLNALLAPLAAAALLGLGRAVLRQPRQAFLAALLFSVSPAGVFMAAAYSESAFAFLAFSAMWQLEQGHSTLGTLLFSLASGARANGLLNAGFVLYARGKRFALRLQLGSAAPRTLPWLGKQLLSLASSAALACAGIFLPFALFQYYAYLRFCGPGTDLGQAIPEPLLQLARDKGYRVAGVAGEKPPWCSQRFPVVYSYIQDTYWNVGFLRYFELRQIPNFLLALPITLLGSWAAWTYVSTNPWHCLTLGLVRSKSGERGKARDGFCGPAVFVYVVHSTALLVFGFFCMHVQVLTRFLGSSSPILYWFAAYLLQEHEPLLWSTGTDNPTSGKPLLGKPPSSRGKGTSDNPVVRLLLNWRSITPLSKSILGFFLGYWLLGLILHCNFLPWT
SIO_010081: PIGV
subclass of: SO_0000673
so part of: PIGV
location: join(342527..343867,343954..344250)
location: region:342527-344250:1
so has part: feature:342527-343867:1:exon
so has part: feature:343954-344250:1:exon

XP_015504461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:342527-343867:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:343954-344250:1:exon

ZDHHC18
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 345346..356484
location: region:345346-356484:1
so has part: feature:345346-356484:1:exon
subclass of: SO_0000010

107214208
type: Gene
SIO_000068: ncbigene

position:345346:1
position: 345346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356484:1
position: 356484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345346-356484:1:exon

ZDHHC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZDHHC18
product: zinc finger DHHC-type palmitoyltransferase 18, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033519594.1
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: join(345346..345459,347382..347542,348901..349050,349798..349935,350273..350321,350607..350709,351787..351896,353117..353216,355607..355698,356371..356484)
location: region:345346-356484:1
so has part: feature:345346-345459:1:exon
so has part: feature:347382-347542:1:exon
so has part: feature:348901-349050:1:exon
so has part: feature:349798-349935:1:exon
so has part: feature:350273-350321:1:exon
so has part: feature:350607-350709:1:exon
so has part: feature:351787-351896:1:exon
so has part: feature:353117-353216:1:exon
so has part: feature:355607-355698:1:exon
so has part: feature:356371-356484:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:345346-345459:1:exon

position:345459:1
position: 345459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:347382-347542:1:exon

position:347382:1
position: 347382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347542:1
position: 347542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:348901-349050:1:exon

position:348901:1
position: 348901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349050:1
position: 349050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:349798-349935:1:exon

position:349798:1
position: 349798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349935:1
position: 349935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:350273-350321:1:exon

position:350273:1
position: 350273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350321:1
position: 350321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:350607-350709:1:exon

position:350607:1
position: 350607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350709:1
position: 350709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:351787-351896:1:exon

position:351787:1
position: 351787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351896:1
position: 351896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:353117-353216:1:exon

position:353117:1
position: 353117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353216:1
position: 353216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:355607-355698:1:exon

position:355607:1
position: 355607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355698:1
position: 355698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:356371-356484:1:exon

position:356371:1
position: 356371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZDHHC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZDHHC18
product: zinc finger DHHC-type palmitoyltransferase 18, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033519595.1
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: join(345346..345459,347382..347542,348901..349050,349798..349935,350273..350321,350607..350709,351787..351896,353117..353216,355607..355698,356061..356102)
location: region:345346-356102:1
so has part: feature:345346-345459:1:exon
so has part: feature:347382-347542:1:exon
so has part: feature:348901-349050:1:exon
so has part: feature:349798-349935:1:exon
so has part: feature:350273-350321:1:exon
so has part: feature:350607-350709:1:exon
so has part: feature:351787-351896:1:exon
so has part: feature:353117-353216:1:exon
so has part: feature:355607-355698:1:exon
so has part: feature:356061-356102:1:exon

position:356102:1
position: 356102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345346-345459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347382-347542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348901-349050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:349798-349935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350273-350321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350607-350709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:351787-351896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:353117-353216:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:355607-355698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356061-356102:1:exon

position:356061:1
position: 356061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZDHHC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC18
translation: MLARHSGVFALTLGLILATSGLFFAFDCPFLASHLTLAIPIIAAVLFFFVISCLLQTSFRDPGILPRATPSEAADLEKRIDSMGSSTYRPPARTMEVVINKYVVKLKYCYTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGKRNYRYFYAFILSLSFLTAFIFACVVTHLTLRSQRDGFLATLKTTPASVLELVICFFSVWSILGLSGFHTYLVASNLTTNEDIKGSWSSKRGSEFANPYSHKSILTNCCAVLCGPFHPSLIDRRGFIQPDTGTPPSPKSEIPSFGAKTDTSMEDACQDFAISCTA
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: join(345380..345459,347382..347542,348901..349050,349798..349935,350273..350321,350607..350709,351787..351896,353117..353216,355607..355648)
location: region:345380-355648:1
so has part: feature:345380-345459:1:exon
so has part: feature:347382-347542:1:exon
so has part: feature:348901-349050:1:exon
so has part: feature:349798-349935:1:exon
so has part: feature:350273-350321:1:exon
so has part: feature:350607-350709:1:exon
so has part: feature:351787-351896:1:exon
so has part: feature:353117-353216:1:exon
so has part: feature:355607-355648:1:exon

XP_033375485.1
type: Protein
SIO_000068: ncbiprotein

position:345380:1
position: 345380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355648:1
position: 355648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:345380-345459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347382-347542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348901-349050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:349798-349935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350273-350321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350607-350709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:351787-351896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:353117-353216:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:355607-355648:1:exon

ZDHHC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZDHHC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC18
translation: MLARHSGVFALTLGLILATSGLFFAFDCPFLASHLTLAIPIIAAVLFFFVISCLLQTSFRDPGILPRATPSEAADLEKRIDSMGSSTYRPPARTMEVVINKYVVKLKYCYTCKMFRPPRTSHCSVCDNCVERFDHHCPWVGNCVGKRNYRYFYAFILSLSFLTAFIFACVVTHLTLRSQRDGFLATLKTTPASVLELVICFFSVWSILGLSGFHTYLVASNLTTNEDIKGSWSSKRGSEFANPYSHKSILTNCCAVLCGPFHPSLIDRRGFIQPDTGTPPSPKSEIPSFGAKTDTSMEDACQDFAISCTA
SIO_010081: ZDHHC18
subclass of: SO_0000673
so part of: ZDHHC18
location: join(345380..345459,347382..347542,348901..349050,349798..349935,350273..350321,350607..350709,351787..351896,353117..353216,355607..355648)
location: region:345380-355648:1
so has part: feature:345380-345459:1:exon
so has part: feature:347382-347542:1:exon
so has part: feature:348901-349050:1:exon
so has part: feature:349798-349935:1:exon
so has part: feature:350273-350321:1:exon
so has part: feature:350607-350709:1:exon
so has part: feature:351787-351896:1:exon
so has part: feature:353117-353216:1:exon
so has part: feature:355607-355648:1:exon

XP_033375486.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:345380-345459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347382-347542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:348901-349050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:349798-349935:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:350273-350321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:350607-350709:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:351787-351896:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:353117-353216:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:355607-355648:1:exon

SFN
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SFN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 359021..360979
location: region:359021-360979:1
so has part: feature:359021-360979:1:exon
subclass of: SO_0000010

107214209
type: Gene
SIO_000068: ncbigene

position:359021:1
position: 359021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360979:1
position: 360979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359021-360979:1:exon

SFN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SFN
product: stratifin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015649373.3
SIO_010081: SFN
subclass of: SO_0000673
so part of: SFN
location: 359021..360979
location: region:359021-360979:1
so has part: feature:359021-360979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359021-360979:1:exon

SFN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SFN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein sigma
translation: MARNHQVQKAKLAEQAERYEDMADFMKAVVEHGDELSNEERNLLSVAYKNVVGCQRSAWRVISSIEHKTEEGDDKAQVVNEYREKVEQELNAVCNNVLGLLDKYLIKKDSDTESKVFYLKMKGDYFRYLAEVASGDDRLSTIEKAQEAYQEAMDISKKEMQPTNPIRLGLALNFSVFHYEIANAPEQAISLAKTTFDEAMGDLHTLSEDSYKDSTLIMQLLRDNLTLWTAECAGEDGGEAGEEPKN
SIO_010081: SFN
subclass of: SO_0000673
so part of: SFN
location: 359764..360504
location: region:359764-360504:1
so has part: feature:359764-360504:1:exon

XP_015504859.1
type: Protein
SIO_000068: ncbiprotein

position:359764:1
position: 359764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360504:1
position: 360504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359764-360504:1:exon

GPN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: GPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(365241..370255)
location: region:365241-370255:-1
so has part: feature:365241-370255:-1:exon
subclass of: SO_0000010

107214207
type: Gene
SIO_000068: ncbigene

position:365241:-1
position: 365241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370255:-1
position: 370255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:365241-370255:-1:exon

GPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GPN2
product: GPN-loop GTPase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_033519607.1
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: complement(join(365241..365811,366241..366371,367136..367296,367604..367790,369378..369928))
location: region:365241-369928:-1
so has part: feature:369378-369928:-1:exon
so has part: feature:367604-367790:-1:exon
so has part: feature:367136-367296:-1:exon
so has part: feature:366241-366371:-1:exon
so has part: feature:365241-365811:-1:exon

position:369928:-1
position: 369928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369378-369928:-1:exon

position:369378:-1
position: 369378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367604-367790:-1:exon

position:367604:-1
position: 367604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367790:-1
position: 367790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:367136-367296:-1:exon

position:367136:-1
position: 367136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367296:-1
position: 367296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:366241-366371:-1:exon

position:366241:-1
position: 366241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366371:-1
position: 366371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:365241-365811:-1:exon

position:365811:-1
position: 365811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GPN2
product: GPN-loop GTPase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_033519608.1
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: complement(join(365241..365811,366241..366371,367136..367296,367604..367760,369378..369926))
location: region:365241-369926:-1
so has part: feature:369378-369926:-1:exon
so has part: feature:367604-367760:-1:exon
so has part: feature:367136-367296:-1:exon
so has part: feature:366241-366371:-1:exon
so has part: feature:365241-365811:-1:exon

position:369926:-1
position: 369926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369378-369926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367604-367760:-1:exon

position:367760:-1
position: 367760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:367136-367296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366241-366371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:365241-365811:-1:exon

GPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPN-loop GTPase 2 isoform X4
translation: MAEGSRGGSLAFGQVVIGPPGSGKTTYCHAMRDFLSRIGRSVAVVNLDPANEALPWPCALDIAELVTLPDVMGSLGLGPNGGLIYCMEYLEANADWLRDRLQGLRGHYILFDCPGQVELYTHHEALKNVFAQLAKWNFRLAAVHLVDSHYCTDPGKFISVLCTSLSTMLHVELPHVNVLSKMDLIEQYGKLAFNLDYYTEVLDLSYLLDHLASDPFFRNFRRLNEKLVEVIEDYSLVSFVPLNVQDKQSMRQVMQAVDKANGYSFGDQEHRSLQALMSAAVGADFHFSSTLAVQEKYVQSQDKAVEEEVMDL
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: complement(join(365739..365811,366241..366371,367136..367296,367604..367760,369378..369794))
location: region:365739-369794:-1
so has part: feature:369378-369794:-1:exon
so has part: feature:367604-367760:-1:exon
so has part: feature:367136-367296:-1:exon
so has part: feature:366241-366371:-1:exon
so has part: feature:365739-365811:-1:exon

XP_033375499.1
type: Protein
SIO_000068: ncbiprotein

position:365739:-1
position: 365739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369794:-1
position: 369794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369378-369794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367604-367760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367136-367296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366241-366371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:365739-365811:-1:exon

GPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPN-loop GTPase 2 isoform X3
translation: MAEGSRGGSLAFGQVVIGPPGSGKTTYCHAMRDFLSRIGRSVAVVNLDPANEALPWPCALDIAELVTLPDVMGSLGLGPNGGLIYCMEYLEANADWLRDRLQGLRGHYILFDCPGQVELYTHHEALKNVFAQLAKWNFRVCVPLCLCSQLAAVHLVDSHYCTDPGKFISVLCTSLSTMLHVELPHVNVLSKMDLIEQYGKLAFNLDYYTEVLDLSYLLDHLASDPFFRNFRRLNEKLVEVIEDYSLVSFVPLNVQDKQSMRQVMQAVDKANGYSFGDQEHRSLQALMSAAVGADFHFSSTLAVQEKYVQSQDKAVEEEVMDL
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: complement(join(365739..365811,366241..366371,367136..367296,367604..367790,369378..369794))
location: region:365739-369794:-1
so has part: feature:369378-369794:-1:exon
so has part: feature:367604-367790:-1:exon
so has part: feature:367136-367296:-1:exon
so has part: feature:366241-366371:-1:exon
so has part: feature:365739-365811:-1:exon

XP_033375498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369378-369794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367604-367790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367136-367296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366241-366371:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:365739-365811:-1:exon

GPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GPN2
product: GPN-loop GTPase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033519605.1
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: complement(join(366563..367296,367604..367790,369378..369815,370197..370255))
location: region:366563-370255:-1
so has part: feature:370197-370255:-1:exon
so has part: feature:369378-369815:-1:exon
so has part: feature:367604-367790:-1:exon
so has part: feature:366563-367296:-1:exon

position:366563:-1
position: 366563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370197-370255:-1:exon

position:370197:-1
position: 370197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:369378-369815:-1:exon

position:369815:-1
position: 369815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:367604-367790:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:366563-367296:-1:exon

GPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GPN2
product: GPN-loop GTPase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_033519606.1
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: complement(join(366563..367296,367604..367760,369378..369933))
location: region:366563-369933:-1
so has part: feature:369378-369933:-1:exon
so has part: feature:367604-367760:-1:exon
so has part: feature:366563-367296:-1:exon

position:369933:-1
position: 369933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369378-369933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367604-367760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366563-367296:-1:exon

GPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPN-loop GTPase 2 isoform X2
translation: MAEGSRGGSLAFGQVVIGPPGSGKTTYCHAMRDFLSRIGRSVAVVNLDPANEALPWPCALDIAELVTLPDVMGSLGLGPNGGLIYCMEYLEANADWLRDRLQGLRGHYILFDCPGQVELYTHHEALKNVFAQLAKWNFRLAAVHLVDSHYCTDPGKFISVLCTSLSTMLHVELPHVNVLSKMDLIEQYGKLAFNLDYYTEVLDLSYLLDHLASDPFFRNFRRLNEKLVEVIEDYSLVSFVPLNVQVTQQEGTGSPACTAAAFCLLGATGLETSAVNRLGAGKQGNTARLGNDLWQPKEGERLMSLGLPGPCVLGWGIQAPLPSALLAWAEDHPEPR
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: complement(join(366860..367296,367604..367760,369378..369794))
location: region:366860-369794:-1
so has part: feature:369378-369794:-1:exon
so has part: feature:367604-367760:-1:exon
so has part: feature:366860-367296:-1:exon

XP_033375497.1
type: Protein
SIO_000068: ncbiprotein

position:366860:-1
position: 366860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:369378-369794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367604-367760:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366860-367296:-1:exon

GPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPN-loop GTPase 2 isoform X1
translation: MAEGSRGGSLAFGQVVIGPPGSGKTTYCHAMRDFLSRIGRSVAVVNLDPANEALPWPCALDIAELVTLPDVMGSLGLGPNGGLIYCMEYLEANADWLRDRLQGLRGHYILFDCPGQVELYTHHEALKNVFAQLAKWNFRVCVPLCLCSQLAAVHLVDSHYCTDPGKFISVLCTSLSTMLHVELPHVNVLSKMDLIEQYGKLAFNLDYYTEVLDLSYLLDHLASDPFFRNFRRLNEKLVEVIEDYSLVSFVPLNVQVTQQEGTGSPACTAAAFCLLGATGLETSAVNRLGAGKQGNTARLGNDLWQPKEGERLMSLGLPGPCVLGWGIQAPLPSALLAWAEDHPEPR
SIO_010081: GPN2
subclass of: SO_0000673
so part of: GPN2
location: complement(join(366860..367296,367604..367790,369378..369794))
location: region:366860-369794:-1
so has part: feature:369378-369794:-1:exon
so has part: feature:367604-367790:-1:exon
so has part: feature:366860-367296:-1:exon

XP_033375496.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:369378-369794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367604-367790:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366860-367296:-1:exon

GPATCH3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: GPATCH3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(371106..377180)
location: region:371106-377180:-1
so has part: feature:371106-377180:-1:exon
subclass of: SO_0000010

107214210
type: Gene
SIO_000068: ncbigene

position:371106:-1
position: 371106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377180:-1
position: 377180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371106-377180:-1:exon

GPATCH3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GPATCH3
product: G-patch domain containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015649374.3
SIO_010081: GPATCH3
subclass of: SO_0000673
so part of: GPATCH3
location: complement(join(371106..371428,371751..371878,372046..372167,372415..372474,375602..376363,376814..377180))
location: region:371106-377180:-1
so has part: feature:376814-377180:-1:exon
so has part: feature:375602-376363:-1:exon
so has part: feature:372415-372474:-1:exon
so has part: feature:372046-372167:-1:exon
so has part: feature:371751-371878:-1:exon
so has part: feature:371106-371428:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:376814-377180:-1:exon

position:376814:-1
position: 376814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:375602-376363:-1:exon

position:375602:-1
position: 375602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376363:-1
position: 376363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:372415-372474:-1:exon

position:372415:-1
position: 372415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372474:-1
position: 372474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:372046-372167:-1:exon

position:372046:-1
position: 372046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372167:-1
position: 372167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:371751-371878:-1:exon

position:371751:-1
position: 371751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371878:-1
position: 371878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:371106-371428:-1:exon

position:371428:-1
position: 371428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPATCH3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GPATCH3
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(375693..375695),aa:OTHER)
product: LOW QUALITY PROTEIN: G patch domain-containing protein 3
translation: MAAPSDTAGDGGAARYCLVSGIPAVLRSAHLRAYFSQFLEAGGFLCFHYRHRPERPPAGGGGGASAPRTCSCLVSVRPGRARSFIRMYSGKRWLGPGGAALPGRCLIRRVRLSPGTAPQVSPSSEDRAAAGECVPGGCVTGGSVTGGSDTFGSVPGGCVTEGSVPGGCVTEGSVTEGSVPGGCVTEGSVPGGCVTEAELKRLPELNPPSFMPFGNVGTPLGVFLELIRACRLPPRLISKLQLHFPRTASSRRYGNVPFQYPGTQTVAEEGGVYTAAGDEITEGEEPVGLTQPARPRDHEEEQQKEEEESSSGDVSGIFQRHAGSAVGAVRAGPTLRAHFXPLSWINGLLKAVLNEIVHHRGAWTPRTAQGDFDEQTADDWDVDMSIYYDKDGGDKDARDSVRMWLEQRLRDGLQDGSVAGQHLGSFERHTKGFGRKVLEQQGWTEGLGLGSSNSGMAEALDNEGQNPRCKRGLGYHGEKLPTFIRRKKPRGDSSVVISTIYDEPEPQDTGDQLLRRQPPTAMKYRQDMAFVRASHPALGSLRAQPR
SIO_010081: GPATCH3
subclass of: SO_0000673
so part of: GPATCH3
location: complement(join(371209..371428,371751..371878,372046..372167,372415..372474,375602..376363,376814..377162))
location: region:371209-377162:-1
so has part: feature:376814-377162:-1:exon
so has part: feature:375602-376363:-1:exon
so has part: feature:372415-372474:-1:exon
so has part: feature:372046-372167:-1:exon
so has part: feature:371751-371878:-1:exon
so has part: feature:371209-371428:-1:exon

XP_015504860.1
type: Protein
SIO_000068: ncbiprotein

position:371209:-1
position: 371209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:377162:-1
position: 377162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:376814-377162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:375602-376363:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:372415-372474:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372046-372167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:371751-371878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:371209-371428:-1:exon

NR0B2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: NR0B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(378653..381632)
location: region:378653-381632:-1
so has part: feature:378653-381632:-1:exon
subclass of: SO_0000010

107214025
type: Gene
SIO_000068: ncbigene

position:378653:-1
position: 378653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:381632:-1
position: 381632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378653-381632:-1:exon

NR0B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NR0B2
product: nuclear receptor subfamily 0 group B member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_015649035.3
SIO_010081: NR0B2
subclass of: SO_0000673
so part of: NR0B2
location: complement(join(378653..379598,380169..381632))
location: region:378653-381632:-1
so has part: feature:380169-381632:-1:exon
so has part: feature:378653-379598:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380169-381632:-1:exon

position:380169:-1
position: 380169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378653-379598:-1:exon

position:379598:-1
position: 379598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NR0B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NR0B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 0 group B member 2
translation: MSTGVDTECERCQCHSKDKHPAILYTLLSQELRPSGAQQRCLCHQRRAVCLRTPHVTCRAASDVLVKTINFVKNVAAFHLLPREDQLLLLDSCWVPLFLLGLVQEMVTFEVMEAPAPSMLKKILLSGQSKGQEPEGTQPTLAAVQRLQWCLNSFWRLDLSPSEYTYLRGAILFNPAIPGLRAPLYIESLQWEAQRALRELLHPEGQGRFSRILRVTSSSRSIPAALVTDLFFRPVIGDAGMGELLVEMLFEVAGWPQAPWLPLPC
SIO_010081: NR0B2
subclass of: SO_0000673
so part of: NR0B2
location: complement(join(379327..379598,380169..380694))
location: region:379327-380694:-1
so has part: feature:380169-380694:-1:exon
so has part: feature:379327-379598:-1:exon

XP_015504521.1
type: Protein
SIO_000068: ncbiprotein

position:379327:-1
position: 379327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380694:-1
position: 380694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380169-380694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379327-379598:-1:exon

NUDC
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: NUDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 381762..389828
location: region:381762-389828:1
so has part: feature:381762-389828:1:exon
subclass of: SO_0000010

107214239
type: Gene
SIO_000068: ncbigene

position:381762:1
position: 381762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389828:1
position: 389828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381762-389828:1:exon

NUDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NUDC
product: nuclear distribution C, dynein complex regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_015649433.3
SIO_010081: NUDC
subclass of: SO_0000673
so part of: NUDC
location: join(381762..381906,383003..383080,384892..385092,385361..385444,385809..385922,386294..386488,387065..387148,387239..387357,389017..389828)
location: region:381762-389828:1
so has part: feature:381762-381906:1:exon
so has part: feature:383003-383080:1:exon
so has part: feature:384892-385092:1:exon
so has part: feature:385361-385444:1:exon
so has part: feature:385809-385922:1:exon
so has part: feature:386294-386488:1:exon
so has part: feature:387065-387148:1:exon
so has part: feature:387239-387357:1:exon
so has part: feature:389017-389828:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:381762-381906:1:exon

position:381906:1
position: 381906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383003-383080:1:exon

position:383003:1
position: 383003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383080:1
position: 383080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384892-385092:1:exon

position:384892:1
position: 384892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385092:1
position: 385092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:385361-385444:1:exon

position:385361:1
position: 385361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385444:1
position: 385444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:385809-385922:1:exon

position:385809:1
position: 385809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385922:1
position: 385922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:386294-386488:1:exon

position:386294:1
position: 386294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386488:1
position: 386488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:387065-387148:1:exon

position:387065:1
position: 387065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387148:1
position: 387148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:387239-387357:1:exon

position:387239:1
position: 387239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387357:1
position: 387357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:389017-389828:1:exon

position:389017:1
position: 389017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NUDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear migration protein nudC
translation: MGLSAEEAAEQEDRFDGMLLAMAQQHQGGVRELVNTFFSFLRRKTDFFTGGEDGVAEKLITEAFSHHNKLAQKERREKKARQEAERRDKAERAARLARDGQQHSEPRIKELTEEEAERLQLEINQKKEAQGQGNGVPVKPSEEEGESSDSNKQGTDDEEEDEKDKGKLKPNSGNGADLPNYRWTQTLSELDLAVPFKVSFRLKGKDVVVDIQRRRLKVGLKGHPPLIDGELFNEVKVEESSWLIEDGKTVTVHLEKINKMEWWNKLVSTDPEINTKKINPENSKLSDLDSETRSMVEKMMYDQRQKSMGLPTSDEQKKQDILKKFMEQHPEMDFSKAKFN
SIO_010081: NUDC
subclass of: SO_0000673
so part of: NUDC
location: join(381811..381906,383003..383080,384892..385092,385361..385444,385809..385922,386294..386488,387065..387148,387239..387357,389017..389068)
location: region:381811-389068:1
so has part: feature:381811-381906:1:exon
so has part: feature:383003-383080:1:exon
so has part: feature:384892-385092:1:exon
so has part: feature:385361-385444:1:exon
so has part: feature:385809-385922:1:exon
so has part: feature:386294-386488:1:exon
so has part: feature:387065-387148:1:exon
so has part: feature:387239-387357:1:exon
so has part: feature:389017-389068:1:exon

XP_015504919.1
type: Protein
SIO_000068: ncbiprotein

position:381811:1
position: 381811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389068:1
position: 389068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381811-381906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:383003-383080:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384892-385092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:385361-385444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:385809-385922:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386294-386488:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387065-387148:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387239-387357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389017-389068:1:exon

KDF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: KDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(394246..401219)
location: region:394246-401219:-1
so has part: feature:394246-401219:-1:exon
subclass of: SO_0000010

107214238
type: Gene
SIO_000068: ncbigene

position:394246:-1
position: 394246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401219:-1
position: 401219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394246-401219:-1:exon

KDF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: KDF1
product: keratinocyte differentiation factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015649430.2
SIO_010081: KDF1
subclass of: SO_0000673
so part of: KDF1
location: complement(join(394246..395546,396152..396226,397021..398128,400061..400234,401157..401219))
location: region:394246-401219:-1
so has part: feature:401157-401219:-1:exon
so has part: feature:400061-400234:-1:exon
so has part: feature:397021-398128:-1:exon
so has part: feature:396152-396226:-1:exon
so has part: feature:394246-395546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:401157-401219:-1:exon

position:401157:-1
position: 401157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400061-400234:-1:exon

position:400061:-1
position: 400061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400234:-1
position: 400234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:397021-398128:-1:exon

position:397021:-1
position: 397021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398128:-1
position: 398128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:396152-396226:-1:exon

position:396152:-1
position: 396152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396226:-1
position: 396226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:394246-395546:-1:exon

position:395546:-1
position: 395546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KDF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: KDF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: keratinocyte differentiation factor 1
translation: MLGRRSRLPPELSSPRQREQPGPEAVPLRARAARDTDVSLEVFSGSTPEIKGGRSRAQQMRDRKGRKAELKDSNGREAETITFISGTAEAPPNQSFCCSSLSQAWNTYKAVFCCIVTCGGCFQDCSVCIPYPGPAETSTEDGKNGDYNGRLPNSPTNTSPAEKNGNQIKKSIMGSSFSYPDVKLKGIPVYPNRNPNHHLESDSCCKELLEKPFRNSIEKAPLPSSHRSSEEYYSFHESDVDISELNGSMSSRQIDVLIFKKLTELFSVHQIDELAKCTSDTVFLEKTNKISDLINSITQDYNLDEQDAECRLVRGIIRISTRKSRVRPHISIPSQSHEDKSSRGNAPDSGNETMLESMVISQDELAVQISEETAADVLARNMRRHSSAGSPASRDSSFQDTETDSSGAPLLQVYC
SIO_010081: KDF1
subclass of: SO_0000673
so part of: KDF1
location: complement(join(395464..395546,396152..396226,397021..398110))
location: region:395464-398110:-1
so has part: feature:397021-398110:-1:exon
so has part: feature:396152-396226:-1:exon
so has part: feature:395464-395546:-1:exon

XP_015504916.1
type: Protein
SIO_000068: ncbiprotein

position:395464:-1
position: 395464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398110:-1
position: 398110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397021-398110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:396152-396226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:395464-395546:-1:exon

TENT5B
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TENT5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(425880..433609)
location: region:425880-433609:-1
so has part: feature:425880-433609:-1:exon
subclass of: SO_0000010

107214154
type: Gene
SIO_000068: ncbigene

position:425880:-1
position: 425880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433609:-1
position: 433609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425880-433609:-1:exon

TENT5B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TENT5B
product: terminal nucleotidyltransferase 5B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_015649234.2
SIO_010081: TENT5B
subclass of: SO_0000673
so part of: TENT5B
location: complement(join(425880..429152,433279..433609))
location: region:425880-433609:-1
so has part: feature:433279-433609:-1:exon
so has part: feature:425880-429152:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433279-433609:-1:exon

position:433279:-1
position: 433279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:425880-429152:-1:exon

position:429152:-1
position: 429152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TENT5B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TENT5B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: terminal nucleotidyltransferase 5B
translation: MLEAAAGAAAGGAEQRGSRFSVLTWEQVQRLDQILGEAVPIHGRGNFPTLSVRPRTIVQVVRSRLEKKGVTVHNVRLNGSAASHVLHQDSGLGYKDLDLIFGVDLKTEDVFQLVKDVVMDCLLDFLPEGVNKDKITPMTLKEAYVQKLVKVCNETDRWSLISLSNNSGKNVELKFVDSLRRQFEFSVDSFQIILDSLLLFGECSENPMAENFHPTVTGESMYGDFEEAMEHLRKRVIATRNPEEIRGGGLLKYCNLLVRGFKPKSEVDMKALQRYMCSRFFIDFSDIGEQLRKLEGYLQSHFVGMESNRYDYLMTLHRVVNESTVCLMGHERRQTLNLIAMLAVRVLAEQNIIPTVTNVTCYYQPAPYVSEINFNYYVTHVQPFLPCNQSYPTWLPCN
SIO_010081: TENT5B
subclass of: SO_0000673
so part of: TENT5B
location: complement(join(428133..429152,433279..433455))
location: region:428133-433455:-1
so has part: feature:433279-433455:-1:exon
so has part: feature:428133-429152:-1:exon

XP_015504720.1
type: Protein
SIO_000068: ncbiprotein

position:428133:-1
position: 428133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433455:-1
position: 433455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433279-433455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428133-429152:-1:exon

SLC9A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SLC9A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(440947..465248)
location: region:440947-465248:-1
so has part: feature:440947-465248:-1:exon
subclass of: SO_0000010

107214153
type: Gene
SIO_000068: ncbigene

position:440947:-1
position: 440947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465248:-1
position: 465248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440947-465248:-1:exon

SLC9A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SLC9A1
product: solute carrier family 9 member A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_015649233.2
SIO_010081: SLC9A1
subclass of: SO_0000673
so part of: SLC9A1
location: complement(join(440947..441907,442558..442630,442938..443039,443448..443562,443683..443856,444292..444362,444724..444813,445021..445223,445673..445890,446368..446618,448098..448558,464921..465248))
location: region:440947-465248:-1
so has part: feature:464921-465248:-1:exon
so has part: feature:448098-448558:-1:exon
so has part: feature:446368-446618:-1:exon
so has part: feature:445673-445890:-1:exon
so has part: feature:445021-445223:-1:exon
so has part: feature:444724-444813:-1:exon
so has part: feature:444292-444362:-1:exon
so has part: feature:443683-443856:-1:exon
so has part: feature:443448-443562:-1:exon
so has part: feature:442938-443039:-1:exon
so has part: feature:442558-442630:-1:exon
so has part: feature:440947-441907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464921-465248:-1:exon

position:464921:-1
position: 464921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:448098-448558:-1:exon

position:448098:-1
position: 448098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448558:-1
position: 448558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:446368-446618:-1:exon

position:446368:-1
position: 446368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446618:-1
position: 446618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:445673-445890:-1:exon

position:445673:-1
position: 445673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445890:-1
position: 445890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:445021-445223:-1:exon

position:445021:-1
position: 445021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445223:-1
position: 445223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:444724-444813:-1:exon

position:444724:-1
position: 444724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444813:-1
position: 444813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:444292-444362:-1:exon

position:444292:-1
position: 444292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444362:-1
position: 444362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:443683-443856:-1:exon

position:443683:-1
position: 443683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443856:-1
position: 443856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:443448-443562:-1:exon

position:443448:-1
position: 443448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443562:-1
position: 443562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:442938-443039:-1:exon

position:442938:-1
position: 442938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443039:-1
position: 443039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:442558-442630:-1:exon

position:442558:-1
position: 442558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442630:-1
position: 442630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:440947-441907:-1:exon

position:441907:-1
position: 441907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC9A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SLC9A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 1
translation: MGAAALRALPWALLLLGPLLPGQVLQANPMLTSEGQPAPLPGGDVPGFTPAPPAAPEEIHPLKEQPANGSGEGHAKPRKAFPVIGIDYTHVRIPFEISLWILLACLMKLGFHVIPSVSSIVPESCLLIVVGLLVGGLIKGVGEKPPILKSDIFFLFLLPPIILDAGYFLPLRPFTENLGTILIFAVVGTLWNAFFLGGLMYAVCQLGGPGLNHIGLLANLLFGSIISAVDPVAVLAVFEEIHINELLHILVFGESLLNDAVTVVLYHLFEEFASFEQVTILDIILGFFSFFVVSLGGVLVGVIYGVIAAFTSRFTSHIRVIEPLFVFLYSYMAYLSAELFHLSGIMALIAAGVVMRPYVEANISHKSHTTIKYFLKMWSSVSETLIFIFLGVSTVAGHHYWNWTFVISTLFFCLIARVLGVLVLTWFINKFRIVKLTPKDQFIIAYGGLRGAIAFSLGYLLDYKHFGMRDMFLTAIITVIFFTVFVQGMTIRPLVDLLAVKKKQETKRSINEEIHTQFLDHLLTGIEDICGHYGHHHWKDKLNRFNKKYVKKCLIAGERSKEPQLIAFYHKMEMKQAIELVESGGIGKIPSAVSTVSIQNINPQSLPLERVLPALSKDKEEEIRKILRTNLQKTRQRLRSYNRHTLVADPYEEAWNQMLLRRQKARQLEQKMNNYLTVPAHRVDSPTMSRARIGSDPLAYEPKEDSENLPIITIDPASPQSPESVDLMSEEPKGCSGLPPSPEEDEEGLVMRVKEPSSPGTDDVFTPGASDSPSNQRMLRCLSDPGPRPEPEEGEPFIPKGQ
SIO_010081: SLC9A1
subclass of: SO_0000673
so part of: SLC9A1
location: complement(join(441585..441907,442558..442630,442938..443039,443448..443562,443683..443856,444292..444362,444724..444813,445021..445223,445673..445890,446368..446618,448098..448558,464921..465248))
location: region:441585-465248:-1
so has part: feature:464921-465248:-1:exon
so has part: feature:448098-448558:-1:exon
so has part: feature:446368-446618:-1:exon
so has part: feature:445673-445890:-1:exon
so has part: feature:445021-445223:-1:exon
so has part: feature:444724-444813:-1:exon
so has part: feature:444292-444362:-1:exon
so has part: feature:443683-443856:-1:exon
so has part: feature:443448-443562:-1:exon
so has part: feature:442938-443039:-1:exon
so has part: feature:442558-442630:-1:exon
so has part: feature:441585-441907:-1:exon

XP_015504719.1
type: Protein
SIO_000068: ncbiprotein

position:441585:-1
position: 441585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464921-465248:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448098-448558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:446368-446618:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445673-445890:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445021-445223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:444724-444813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:444292-444362:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:443683-443856:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:443448-443562:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:442938-443039:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:442558-442630:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:441585-441907:-1:exon

LOC117245444
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117245444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 465782..468216
location: region:465782-468216:1
so has part: feature:465782-468216:1:exon
subclass of: SO_0000011

117245444
type: Gene
SIO_000068: ncbigene

position:465782:1
position: 465782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468216:1
position: 468216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465782-468216:1:exon

LOC117245444
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC117245444
product: uncharacterized LOC117245444
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_004500142.1
SIO_010081: LOC117245444
subclass of: SO_0000673
so part of: LOC117245444
location: join(465782..466710,467493..468216)
location: region:465782-468216:1
so has part: feature:465782-466710:1:exon
so has part: feature:467493-468216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465782-466710:1:exon

position:466710:1
position: 466710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467493-468216:1:exon

position:467493:1
position: 467493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDTC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: WDTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 469419..495009
location: region:469419-495009:1
so has part: feature:469419-495009:1:exon
subclass of: SO_0000010

107214032
type: Gene
SIO_000068: ncbigene

position:469419:1
position: 469419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495009:1
position: 495009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:469419-495009:1:exon

WDTC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: WDTC1
product: WD and tetratricopeptide repeats 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 21 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015649042.3
SIO_010081: WDTC1
subclass of: SO_0000673
so part of: WDTC1
location: join(469419..469588,475315..475456,478505..478588,479603..479649,480797..480908,481296..481483,482091..482273,484045..484192,485260..485335,485905..486001,487259..487432,490593..490828,491202..491370,491762..491954,492071..495009)
location: region:469419-495009:1
so has part: feature:469419-469588:1:exon
so has part: feature:475315-475456:1:exon
so has part: feature:478505-478588:1:exon
so has part: feature:479603-479649:1:exon
so has part: feature:480797-480908:1:exon
so has part: feature:481296-481483:1:exon
so has part: feature:482091-482273:1:exon
so has part: feature:484045-484192:1:exon
so has part: feature:485260-485335:1:exon
so has part: feature:485905-486001:1:exon
so has part: feature:487259-487432:1:exon
so has part: feature:490593-490828:1:exon
so has part: feature:491202-491370:1:exon
so has part: feature:491762-491954:1:exon
so has part: feature:492071-495009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:469419-469588:1:exon

position:469588:1
position: 469588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475315-475456:1:exon

position:475315:1
position: 475315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475456:1
position: 475456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478505-478588:1:exon

position:478505:1
position: 478505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478588:1
position: 478588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:479603-479649:1:exon

position:479603:1
position: 479603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479649:1
position: 479649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480797-480908:1:exon

position:480797:1
position: 480797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480908:1
position: 480908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:481296-481483:1:exon

position:481296:1
position: 481296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481483:1
position: 481483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:482091-482273:1:exon

position:482091:1
position: 482091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482273:1
position: 482273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:484045-484192:1:exon

position:484045:1
position: 484045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484192:1
position: 484192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:485260-485335:1:exon

position:485260:1
position: 485260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485335:1
position: 485335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:485905-486001:1:exon

position:485905:1
position: 485905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486001:1
position: 486001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:487259-487432:1:exon

position:487259:1
position: 487259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487432:1
position: 487432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:490593-490828:1:exon

position:490593:1
position: 490593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490828:1
position: 490828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:491202-491370:1:exon

position:491202:1
position: 491202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491370:1
position: 491370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:491762-491954:1:exon

position:491762:1
position: 491762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491954:1
position: 491954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:492071-495009:1:exon

position:492071:1
position: 492071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDTC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: WDTC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD and tetratricopeptide repeats protein 1
translation: MLGCTAALPTASLRLPHCKKMAKANITRDIIHRQIKERGALGFERHYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHSGDRILITGAADSKVHVHDLTVKETVHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKRSEVLIDLTEYCGQLVEAKCLTVNPQDNNYLAVGASGPFVRLYDIRMIHNHRTNNYGPVLSTGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTYKQRPYTFLLPKKCHTSGEVQNGKTSTNGVSNGIHLHSNGFRLAEGRAHVSPQVELPPYLERIKQQANEAFACQLWTQAIQLYSKAVQKAPNNAMLYGNRAAAYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDRDINAALFSKSDNAEDKKGGGPIRLRATGRKDSISEDEMVLRERSYDYKFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLWNPRPESETLNGRVVVDMEGASQANQRRMNADPLEVMLLNMGYRITGLTSGGAGGSDDEDSSEGQVQCRPS
SIO_010081: WDTC1
subclass of: SO_0000673
so part of: WDTC1
location: join(475349..475456,478505..478588,479603..479649,480797..480908,481296..481483,482091..482273,484045..484192,485260..485335,485905..486001,487259..487432,490593..490828,491202..491370,491762..491954,492071..492268)
location: region:475349-492268:1
so has part: feature:475349-475456:1:exon
so has part: feature:478505-478588:1:exon
so has part: feature:479603-479649:1:exon
so has part: feature:480797-480908:1:exon
so has part: feature:481296-481483:1:exon
so has part: feature:482091-482273:1:exon
so has part: feature:484045-484192:1:exon
so has part: feature:485260-485335:1:exon
so has part: feature:485905-486001:1:exon
so has part: feature:487259-487432:1:exon
so has part: feature:490593-490828:1:exon
so has part: feature:491202-491370:1:exon
so has part: feature:491762-491954:1:exon
so has part: feature:492071-492268:1:exon

XP_015504528.1
type: Protein
SIO_000068: ncbiprotein

position:475349:1
position: 475349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492268:1
position: 492268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475349-475456:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478505-478588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479603-479649:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480797-480908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481296-481483:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:482091-482273:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:484045-484192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485260-485335:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485905-486001:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:487259-487432:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:490593-490828:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:491202-491370:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:491762-491954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:492071-492268:1:exon

TMEM222
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TMEM222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 499653..506601
location: region:499653-506601:1
so has part: feature:499653-506601:1:exon
subclass of: SO_0000010

107214155
type: Gene
SIO_000068: ncbigene

position:499653:1
position: 499653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506601:1
position: 506601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499653-506601:1:exon

TMEM222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TMEM222
product: transmembrane protein 222, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015649237.2
SIO_010081: TMEM222
subclass of: SO_0000673
so part of: TMEM222
location: join(499653..499795,501629..501713,502364..502395,503053..503149,503431..503561,504494..504805)
location: region:499653-504805:1
so has part: feature:499653-499795:1:exon
so has part: feature:501629-501713:1:exon
so has part: feature:502364-502395:1:exon
so has part: feature:503053-503149:1:exon
so has part: feature:503431-503561:1:exon
so has part: feature:504494-504805:1:exon

position:504805:1
position: 504805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499653-499795:1:exon

position:499795:1
position: 499795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:501629-501713:1:exon

position:501629:1
position: 501629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501713:1
position: 501713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502364-502395:1:exon

position:502364:1
position: 502364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502395:1
position: 502395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:503053-503149:1:exon

position:503053:1
position: 503053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503149:1
position: 503149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:503431-503561:1:exon

position:503431:1
position: 503431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503561:1
position: 503561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:504494-504805:1:exon

position:504494:1
position: 504494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TMEM222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 222 isoform X2
translation: MAAAEPGMKQFNGGGGAAPDAERGRFPHCVVWTPIPVLTWLFPIIGHMGICTSAGVIRDFAGPYFVSEDNMAFGKPVKYWKLDPSKVCATGPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYDNSTSWNMVKLCFFTLLYGKYVSIGGFVKTWLPFVLLLGVIVTVVLTLHLR
SIO_010081: TMEM222
subclass of: SO_0000673
so part of: TMEM222
location: join(499680..499795,501629..501713,502364..502395,503053..503149,503431..503561,504494..504581)
location: region:499680-504581:1
so has part: feature:499680-499795:1:exon
so has part: feature:501629-501713:1:exon
so has part: feature:502364-502395:1:exon
so has part: feature:503053-503149:1:exon
so has part: feature:503431-503561:1:exon
so has part: feature:504494-504581:1:exon

XP_015504723.1
type: Protein
SIO_000068: ncbiprotein

position:499680:1
position: 499680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504581:1
position: 504581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499680-499795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501629-501713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502364-502395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:503053-503149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503431-503561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:504494-504581:1:exon

TMEM222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TMEM222
product: transmembrane protein 222, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_015649235.2
SIO_010081: TMEM222
subclass of: SO_0000673
so part of: TMEM222
location: join(502402..503149,503431..503561,504494..506601)
location: region:502402-506601:1
so has part: feature:502402-503149:1:exon
so has part: feature:503431-503561:1:exon
so has part: feature:504494-506601:1:exon

position:502402:1
position: 502402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502402-503149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503431-503561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:504494-506601:1:exon

TMEM222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TMEM222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 222 isoform X1
translation: MAERFLWSVGAVEGCPPELCDLSLWGAEGSEQPFAASACPRSWAPCISEALGLSEPFKLVQDEEWCSMILLAPLQLRRLGFPRGGAGRTRQRKLSHPCRYWKLDPSKVCATGPNAWDTAVHDASEEYKHRMHNLCCDNCHSHVALALNLMRYDNSTSWNMVKLCFFTLLYGKYVSIGGFVKTWLPFVLLLGVIVTVVLTLHLR
SIO_010081: TMEM222
subclass of: SO_0000673
so part of: TMEM222
location: join(502757..503149,503431..503561,504494..504581)
location: region:502757-504581:1
so has part: feature:502757-503149:1:exon
so has part: feature:503431-503561:1:exon
so has part: feature:504494-504581:1:exon

XP_015504721.1
type: Protein
SIO_000068: ncbiprotein

position:502757:1
position: 502757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502757-503149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503431-503561:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:504494-504581:1:exon

SYTL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SYTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 509666..516228
location: region:509666-516228:1
so has part: feature:509666-516228:1:exon
subclass of: SO_0000010

107214270
type: Gene
SIO_000068: ncbigene

position:509666:1
position: 509666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516228:1
position: 516228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509666-516228:1:exon

SYTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SYTL1
product: synaptotagmin like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015649500.3
SIO_010081: SYTL1
subclass of: SO_0000673
so part of: SYTL1
location: join(509666..509835,510462..510575,511350..511620,511905..512053,512129..512237,512546..512585,512838..512937,513087..513169,513494..513613,513698..513864,513936..514038,514137..514298,514366..514444,514512..514611,514685..514890,515525..516228)
location: region:509666-516228:1
so has part: feature:509666-509835:1:exon
so has part: feature:510462-510575:1:exon
so has part: feature:511350-511620:1:exon
so has part: feature:511905-512053:1:exon
so has part: feature:512129-512237:1:exon
so has part: feature:512546-512585:1:exon
so has part: feature:512838-512937:1:exon
so has part: feature:513087-513169:1:exon
so has part: feature:513494-513613:1:exon
so has part: feature:513698-513864:1:exon
so has part: feature:513936-514038:1:exon
so has part: feature:514137-514298:1:exon
so has part: feature:514366-514444:1:exon
so has part: feature:514512-514611:1:exon
so has part: feature:514685-514890:1:exon
so has part: feature:515525-516228:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509666-509835:1:exon

position:509835:1
position: 509835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510462-510575:1:exon

position:510462:1
position: 510462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510575:1
position: 510575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:511350-511620:1:exon

position:511350:1
position: 511350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511620:1
position: 511620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:511905-512053:1:exon

position:511905:1
position: 511905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512053:1
position: 512053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:512129-512237:1:exon

position:512129:1
position: 512129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512237:1
position: 512237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:512546-512585:1:exon

position:512546:1
position: 512546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512585:1
position: 512585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:512838-512937:1:exon

position:512838:1
position: 512838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512937:1
position: 512937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:513087-513169:1:exon

position:513087:1
position: 513087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513169:1
position: 513169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:513494-513613:1:exon

position:513494:1
position: 513494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513613:1
position: 513613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:513698-513864:1:exon

position:513698:1
position: 513698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513864:1
position: 513864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:513936-514038:1:exon

position:513936:1
position: 513936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514038:1
position: 514038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:514137-514298:1:exon

position:514137:1
position: 514137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514298:1
position: 514298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:514366-514444:1:exon

position:514366:1
position: 514366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514444:1
position: 514444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:514512-514611:1:exon

position:514512:1
position: 514512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514611:1
position: 514611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:514685-514890:1:exon

position:514685:1
position: 514685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514890:1
position: 514890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:515525-516228:1:exon

position:515525:1
position: 515525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SYTL1
product: synaptotagmin like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015649502.3
SIO_010081: SYTL1
subclass of: SO_0000673
so part of: SYTL1
location: join(509666..509835,510462..510575,511350..511620,511905..512053,512129..512237,512546..512585,512883..512937,513087..513169,513494..513613,513698..513864,513936..514038,514137..514298,514366..514444,514512..514611,514685..514890,515525..516228)
location: region:509666-516228:1
so has part: feature:509666-509835:1:exon
so has part: feature:510462-510575:1:exon
so has part: feature:511350-511620:1:exon
so has part: feature:511905-512053:1:exon
so has part: feature:512129-512237:1:exon
so has part: feature:512546-512585:1:exon
so has part: feature:512883-512937:1:exon
so has part: feature:513087-513169:1:exon
so has part: feature:513494-513613:1:exon
so has part: feature:513698-513864:1:exon
so has part: feature:513936-514038:1:exon
so has part: feature:514137-514298:1:exon
so has part: feature:514366-514444:1:exon
so has part: feature:514512-514611:1:exon
so has part: feature:514685-514890:1:exon
so has part: feature:515525-516228:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509666-509835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510462-510575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:511350-511620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:511905-512053:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512129-512237:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:512546-512585:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:512883-512937:1:exon

position:512883:1
position: 512883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:513087-513169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:513494-513613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513698-513864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:513936-514038:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:514137-514298:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:514366-514444:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:514512-514611:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:514685-514890:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:515525-516228:1:exon

SYTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SYTL1
product: synaptotagmin like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015649501.3
SIO_010081: SYTL1
subclass of: SO_0000673
so part of: SYTL1
location: join(509666..509835,510462..510575,511353..511620,511905..512053,512129..512237,512546..512585,512838..512937,513087..513169,513494..513613,513698..513864,513936..514038,514137..514298,514366..514444,514512..514611,514685..514890,515525..516228)
location: region:509666-516228:1
so has part: feature:509666-509835:1:exon
so has part: feature:510462-510575:1:exon
so has part: feature:511353-511620:1:exon
so has part: feature:511905-512053:1:exon
so has part: feature:512129-512237:1:exon
so has part: feature:512546-512585:1:exon
so has part: feature:512838-512937:1:exon
so has part: feature:513087-513169:1:exon
so has part: feature:513494-513613:1:exon
so has part: feature:513698-513864:1:exon
so has part: feature:513936-514038:1:exon
so has part: feature:514137-514298:1:exon
so has part: feature:514366-514444:1:exon
so has part: feature:514512-514611:1:exon
so has part: feature:514685-514890:1:exon
so has part: feature:515525-516228:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509666-509835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510462-510575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:511353-511620:1:exon

position:511353:1
position: 511353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:511905-512053:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512129-512237:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:512546-512585:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:512838-512937:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513087-513169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:513494-513613:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513698-513864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:513936-514038:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:514137-514298:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:514366-514444:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:514512-514611:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:514685-514890:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:515525-516228:1:exon

SYTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SYTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 1 isoform X1
translation: MLASLVHARHAEPPVSPGGPDPRGVPAVSPGPAMALEPEALLDLSFLTEQERSSIAEVLRRDWQLRRREQGRISKLRKSVSDPARLRSLTGDWFCDARAQRHQQQLLGSDLVRASIRRRRRPRGTGGLERGPSLGELEAIDEPLAEEKEDEDGALETDESSPPEEVQEATEPQPGPPAPAEEGTPMSQALLQGDILLREQDSPAQPGESGAGSGFGSSSAEEDEEEPDSAHAGQRPETPETDQTPPAPLSPQNGHTAPSLLSTSSSVSSLSSSTLSGSLMSLYSEGELGRVAVQGCVQFSLRYDPARKELQVHVLRCRELAQARKQRSDPYIKTYLLPDKSNHSKRKTAVRKRSLDPVFNETLKYKLEKRDLQGRTLNLSVWHHDSLGRNLFLGEVEVALGSWDWANTRPEWFSLQPRTPIPSDGLASRGNLNLALKFLPAGSEGGGMPPTGELHIWVKDAQSLIPLQSGTVDAFVQCYVLPDDSKASRQKTRVVKRSLSPLFNHTMVYDGFQAKDLAEACAEFTLWHHETFSKRQLGGIRLSLGTGSSYGLPVGWMDSTQEEQGVWKQLLQQPGRWVEALLPLRTNLVPRV
SIO_010081: SYTL1
subclass of: SO_0000673
so part of: SYTL1
location: join(511400..511620,511905..512053,512129..512237,512546..512585,512838..512937,513087..513169,513494..513613,513698..513864,513936..514038,514137..514298,514366..514444,514512..514611,514685..514890,515525..515664)
location: region:511400-515664:1
so has part: feature:511400-511620:1:exon
so has part: feature:511905-512053:1:exon
so has part: feature:512129-512237:1:exon
so has part: feature:512546-512585:1:exon
so has part: feature:512838-512937:1:exon
so has part: feature:513087-513169:1:exon
so has part: feature:513494-513613:1:exon
so has part: feature:513698-513864:1:exon
so has part: feature:513936-514038:1:exon
so has part: feature:514137-514298:1:exon
so has part: feature:514366-514444:1:exon
so has part: feature:514512-514611:1:exon
so has part: feature:514685-514890:1:exon
so has part: feature:515525-515664:1:exon

XP_015504986.1
type: Protein
SIO_000068: ncbiprotein

position:511400:1
position: 511400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515664:1
position: 515664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511400-511620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511905-512053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512129-512237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512546-512585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512838-512937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513087-513169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:513494-513613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513698-513864:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:513936-514038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:514137-514298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:514366-514444:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:514512-514611:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:514685-514890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:515525-515664:1:exon

SYTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SYTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 1 isoform X1
translation: MLASLVHARHAEPPVSPGGPDPRGVPAVSPGPAMALEPEALLDLSFLTEQERSSIAEVLRRDWQLRRREQGRISKLRKSVSDPARLRSLTGDWFCDARAQRHQQQLLGSDLVRASIRRRRRPRGTGGLERGPSLGELEAIDEPLAEEKEDEDGALETDESSPPEEVQEATEPQPGPPAPAEEGTPMSQALLQGDILLREQDSPAQPGESGAGSGFGSSSAEEDEEEPDSAHAGQRPETPETDQTPPAPLSPQNGHTAPSLLSTSSSVSSLSSSTLSGSLMSLYSEGELGRVAVQGCVQFSLRYDPARKELQVHVLRCRELAQARKQRSDPYIKTYLLPDKSNHSKRKTAVRKRSLDPVFNETLKYKLEKRDLQGRTLNLSVWHHDSLGRNLFLGEVEVALGSWDWANTRPEWFSLQPRTPIPSDGLASRGNLNLALKFLPAGSEGGGMPPTGELHIWVKDAQSLIPLQSGTVDAFVQCYVLPDDSKASRQKTRVVKRSLSPLFNHTMVYDGFQAKDLAEACAEFTLWHHETFSKRQLGGIRLSLGTGSSYGLPVGWMDSTQEEQGVWKQLLQQPGRWVEALLPLRTNLVPRV
SIO_010081: SYTL1
subclass of: SO_0000673
so part of: SYTL1
location: join(511400..511620,511905..512053,512129..512237,512546..512585,512838..512937,513087..513169,513494..513613,513698..513864,513936..514038,514137..514298,514366..514444,514512..514611,514685..514890,515525..515664)
location: region:511400-515664:1
so has part: feature:511400-511620:1:exon
so has part: feature:511905-512053:1:exon
so has part: feature:512129-512237:1:exon
so has part: feature:512546-512585:1:exon
so has part: feature:512838-512937:1:exon
so has part: feature:513087-513169:1:exon
so has part: feature:513494-513613:1:exon
so has part: feature:513698-513864:1:exon
so has part: feature:513936-514038:1:exon
so has part: feature:514137-514298:1:exon
so has part: feature:514366-514444:1:exon
so has part: feature:514512-514611:1:exon
so has part: feature:514685-514890:1:exon
so has part: feature:515525-515664:1:exon

XP_015504987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511400-511620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511905-512053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512129-512237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512546-512585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512838-512937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513087-513169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:513494-513613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513698-513864:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:513936-514038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:514137-514298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:514366-514444:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:514512-514611:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:514685-514890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:515525-515664:1:exon

SYTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SYTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 1 isoform X2
translation: MLASLVHARHAEPPVSPGGPDPRGVPAVSPGPAMALEPEALLDLSFLTEQERSSIAEVLRRDWQLRRREQGRISKLRKSVSDPARLRSLTGDWFCDARAQRHQQQLLGSDLVRASIRRRRRPRGTGGLERGPSLGELEAIDEPLAEEKEDEDGALETDESSPPEEVQEATEPQALLQGDILLREQDSPAQPGESGAGSGFGSSSAEEDEEEPDSAHAGQRPETPETDQTPPAPLSPQNGHTAPSLLSTSSSVSSLSSSTLSGSLMSLYSEGELGRVAVQGCVQFSLRYDPARKELQVHVLRCRELAQARKQRSDPYIKTYLLPDKSNHSKRKTAVRKRSLDPVFNETLKYKLEKRDLQGRTLNLSVWHHDSLGRNLFLGEVEVALGSWDWANTRPEWFSLQPRTPIPSDGLASRGNLNLALKFLPAGSEGGGMPPTGELHIWVKDAQSLIPLQSGTVDAFVQCYVLPDDSKASRQKTRVVKRSLSPLFNHTMVYDGFQAKDLAEACAEFTLWHHETFSKRQLGGIRLSLGTGSSYGLPVGWMDSTQEEQGVWKQLLQQPGRWVEALLPLRTNLVPRV
SIO_010081: SYTL1
subclass of: SO_0000673
so part of: SYTL1
location: join(511400..511620,511905..512053,512129..512237,512546..512585,512883..512937,513087..513169,513494..513613,513698..513864,513936..514038,514137..514298,514366..514444,514512..514611,514685..514890,515525..515664)
location: region:511400-515664:1
so has part: feature:511400-511620:1:exon
so has part: feature:511905-512053:1:exon
so has part: feature:512129-512237:1:exon
so has part: feature:512546-512585:1:exon
so has part: feature:512883-512937:1:exon
so has part: feature:513087-513169:1:exon
so has part: feature:513494-513613:1:exon
so has part: feature:513698-513864:1:exon
so has part: feature:513936-514038:1:exon
so has part: feature:514137-514298:1:exon
so has part: feature:514366-514444:1:exon
so has part: feature:514512-514611:1:exon
so has part: feature:514685-514890:1:exon
so has part: feature:515525-515664:1:exon

XP_015504988.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:511400-511620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:511905-512053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:512129-512237:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:512546-512585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:512883-512937:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513087-513169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:513494-513613:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513698-513864:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:513936-514038:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:514137-514298:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:514366-514444:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:514512-514611:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:514685-514890:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:515525-515664:1:exon

CD164L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CD164L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516211..523301)
location: region:516211-523301:-1
so has part: feature:516211-523301:-1:exon
subclass of: SO_0000010

107214272
type: Gene
SIO_000068: ncbigene

position:516211:-1
position: 516211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523301:-1
position: 523301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516211-523301:-1:exon

CD164L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CD164L2
product: CD164 molecule like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015649506.2
SIO_010081: CD164L2
subclass of: SO_0000673
so part of: CD164L2
location: complement(join(516211..516619,517901..518066,518673..518738,518892..518969,519313..519417,523083..523301))
location: region:516211-523301:-1
so has part: feature:523083-523301:-1:exon
so has part: feature:519313-519417:-1:exon
so has part: feature:518892-518969:-1:exon
so has part: feature:518673-518738:-1:exon
so has part: feature:517901-518066:-1:exon
so has part: feature:516211-516619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523083-523301:-1:exon

position:523083:-1
position: 523083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:519313-519417:-1:exon

position:519313:-1
position: 519313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519417:-1
position: 519417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:518892-518969:-1:exon

position:518892:-1
position: 518892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518969:-1
position: 518969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518673-518738:-1:exon

position:518673:-1
position: 518673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518738:-1
position: 518738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:517901-518066:-1:exon

position:517901:-1
position: 517901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518066:-1
position: 518066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:516211-516619:-1:exon

position:516619:-1
position: 516619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CD164L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CD164L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD164 sialomucin-like 2 protein isoform X2
translation: MILMDKSRGAGLAVENSIPREEFGAKVRGSQAAGECGKLRSCEMCTASSHSHNGTDCVWVGCGTPEEPETGSCEQRGSAVRDTCALYNTSSQCRALKSHTEEPPRSHSKEPVTHSTRTTTTSAPLTGSPEFHPPGFDTASFIGGIVLVLCVQAVAFFIIKFIKSKDSTYQTLI
SIO_010081: CD164L2
subclass of: SO_0000673
so part of: CD164L2
location: complement(join(516613..516619,517901..518066,518673..518738,518892..518969,519313..519417,523083..523182))
location: region:516613-523182:-1
so has part: feature:523083-523182:-1:exon
so has part: feature:519313-519417:-1:exon
so has part: feature:518892-518969:-1:exon
so has part: feature:518673-518738:-1:exon
so has part: feature:517901-518066:-1:exon
so has part: feature:516613-516619:-1:exon

XP_015504992.1
type: Protein
SIO_000068: ncbiprotein

position:516613:-1
position: 516613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523182:-1
position: 523182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523083-523182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519313-519417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518892-518969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518673-518738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517901-518066:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:516613-516619:-1:exon

CD164L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CD164L2
product: CD164 molecule like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015649505.3
SIO_010081: CD164L2
subclass of: SO_0000673
so part of: CD164L2
location: complement(join(516626..517547,517901..518066,518673..518738,518892..518969,519313..519417,523083..523301))
location: region:516626-523301:-1
so has part: feature:523083-523301:-1:exon
so has part: feature:519313-519417:-1:exon
so has part: feature:518892-518969:-1:exon
so has part: feature:518673-518738:-1:exon
so has part: feature:517901-518066:-1:exon
so has part: feature:516626-517547:-1:exon

position:516626:-1
position: 516626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523083-523301:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519313-519417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518892-518969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518673-518738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517901-518066:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:516626-517547:-1:exon

position:517547:-1
position: 517547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CD164L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CD164L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD164 sialomucin-like 2 protein isoform X1
translation: MILMDKSRGAGLAVENSIPREEFGAKVRGSQAAGECGKLRSCEMCTASSHSHNGTDCVWVGCGTPEEPETGSCEQRGSAVRDTCALYNTSSQCRALKSHTEEPPRSHSKEPVTHSTRTTTTSAPLTGSPEFHPPGFDTASFIGGIVLVLCVQAVAFFIIKFIKSKDSTYQTLEDNQ
SIO_010081: CD164L2
subclass of: SO_0000673
so part of: CD164L2
location: complement(join(517532..517547,517901..518066,518673..518738,518892..518969,519313..519417,523083..523182))
location: region:517532-523182:-1
so has part: feature:523083-523182:-1:exon
so has part: feature:519313-519417:-1:exon
so has part: feature:518892-518969:-1:exon
so has part: feature:518673-518738:-1:exon
so has part: feature:517901-518066:-1:exon
so has part: feature:517532-517547:-1:exon

XP_015504991.1
type: Protein
SIO_000068: ncbiprotein

position:517532:-1
position: 517532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523083-523182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:519313-519417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518892-518969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518673-518738:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:517901-518066:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517532-517547:-1:exon

GPR3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: GPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 523450..525327
location: region:523450-525327:1
so has part: feature:523450-525327:1:exon
subclass of: SO_0000010

107214271
type: Gene
SIO_000068: ncbigene

position:523450:1
position: 523450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525327:1
position: 525327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523450-525327:1:exon

GPR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GPR3
product: G protein-coupled receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033519613.1
SIO_010081: GPR3
subclass of: SO_0000673
so part of: GPR3
location: 523450..525327
location: region:523450-525327:1
so has part: feature:523450-525327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:523450-525327:1:exon

GPR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GPR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 3
translation: MMEKEPPNSSEGQQGWFSARNGSGSSLDLESVVQPLALNLWDVVLCISGTIISCENAIVVVVIFYTPAFRAPMFLLIGSLATADLLAGLGLILHFAFVYLIPSEAVSLLTVGLLVTSFTASVSSLLTITIDRYLSLYNALTYYSERTVTRTYIMLILTWGASICYGLLPVMGWNCLKEPSSCSIVRPLTKNHLIILSVSFFAVFAAMLQLYVQICRIVCRHAHQIAVQRHFLASSHYDSTRKGIATLAVILGTFASCWLPFAVYGLLGDDSSPALYTYVTLLPATYNSMLNPVIYAFRNQEIQKVLWAVCCGCFSSTLPFRSRSPSDV
SIO_010081: GPR3
subclass of: SO_0000673
so part of: GPR3
location: 523469..524455
location: region:523469-524455:1
so has part: feature:523469-524455:1:exon

XP_033375504.1
type: Protein
SIO_000068: ncbiprotein

position:523469:1
position: 523469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524455:1
position: 524455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523469-524455:1:exon

WASF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: WASF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(534949..564378)
location: region:534949-564378:-1
so has part: feature:534949-564378:-1:exon
subclass of: SO_0000010

107214034
type: Gene
SIO_000068: ncbigene

position:534949:-1
position: 534949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564378:-1
position: 564378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534949-564378:-1:exon

WASF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: WASF2
product: WASP family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019008841.2
SIO_010081: WASF2
subclass of: SO_0000673
so part of: WASF2
location: complement(join(534949..536440,536843..536918,537284..537440,539704..539859,541213..541343,542118..542235,543282..543435,543932..544066,547623..547776,564273..564378))
location: region:534949-564378:-1
so has part: feature:564273-564378:-1:exon
so has part: feature:547623-547776:-1:exon
so has part: feature:543932-544066:-1:exon
so has part: feature:543282-543435:-1:exon
so has part: feature:542118-542235:-1:exon
so has part: feature:541213-541343:-1:exon
so has part: feature:539704-539859:-1:exon
so has part: feature:537284-537440:-1:exon
so has part: feature:536843-536918:-1:exon
so has part: feature:534949-536440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564273-564378:-1:exon

position:564273:-1
position: 564273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547623-547776:-1:exon

position:547623:-1
position: 547623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547776:-1
position: 547776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:543932-544066:-1:exon

position:543932:-1
position: 543932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544066:-1
position: 544066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:543282-543435:-1:exon

position:543282:-1
position: 543282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543435:-1
position: 543435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542118-542235:-1:exon

position:542118:-1
position: 542118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542235:-1
position: 542235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:541213-541343:-1:exon

position:541213:-1
position: 541213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541343:-1
position: 541343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:539704-539859:-1:exon

position:539704:-1
position: 539704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539859:-1
position: 539859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:537284-537440:-1:exon

position:537284:-1
position: 537284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537440:-1
position: 537440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:536843-536918:-1:exon

position:536843:-1
position: 536843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536918:-1
position: 536918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:534949-536440:-1:exon

position:536440:-1
position: 536440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WASF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: WASF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: wiskott-Aldrich syndrome protein family member 2
translation: MPLVTRNIEPRHLCRQTLPSVPSELECVTNITLANVIRQLGSLSKSAEDIFGELFTQANTFASRVSILVERVDRLQVKVTQLDPKEEEVSLQGINTRKAFKSSTTQDQKLFDRDSLPVPVLETYKTCNTPPPLNILSPYRDDGKEALKFYTDPSYFFDLWKEKMLQDTKDIMKEKRKHRKEKKENPNRGNVNPRKIKTRKEEWEKLKMGQEFVESKDKHGPAGYPSNMVYQNGSIGSSESMDGNCYPPPPQTDSIVPPPPSFPDDSLPPPPLEFSYPVDNQRGSGSGGPKRSSLVSPSHPPPAPPIGSPLAARPGFAPPPAPPPPPPSTSKPKSSLPAVSDARSDLLSAIRQGFQLRKVEEQREQEKRDVVGNDVATILSRRIAVEYSDSEDDSSEFDEDEWSD
SIO_010081: WASF2
subclass of: SO_0000673
so part of: WASF2
location: complement(join(536283..536440,536843..536918,537284..537440,539704..539859,541213..541343,542118..542235,543282..543435,543932..544066,547623..547752))
location: region:536283-547752:-1
so has part: feature:547623-547752:-1:exon
so has part: feature:543932-544066:-1:exon
so has part: feature:543282-543435:-1:exon
so has part: feature:542118-542235:-1:exon
so has part: feature:541213-541343:-1:exon
so has part: feature:539704-539859:-1:exon
so has part: feature:537284-537440:-1:exon
so has part: feature:536843-536918:-1:exon
so has part: feature:536283-536440:-1:exon

XP_018864386.1
type: Protein
SIO_000068: ncbiprotein

position:536283:-1
position: 536283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547752:-1
position: 547752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547623-547752:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:543932-544066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:543282-543435:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542118-542235:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:541213-541343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:539704-539859:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537284-537440:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:536843-536918:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:536283-536440:-1:exon

AHDC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: AHDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(576860..597062)
location: region:576860-597062:-1
so has part: feature:576860-597062:-1:exon
subclass of: SO_0000010

107214202
type: Gene
SIO_000068: ncbigene

position:576860:-1
position: 576860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597062:-1
position: 597062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576860-597062:-1:exon

AHDC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: AHDC1
product: AT-hook DNA binding motif containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033519596.1
SIO_010081: AHDC1
subclass of: SO_0000673
so part of: AHDC1
location: complement(join(576860..576961,577069..582126,582535..582575,583357..583519,596708..597062))
location: region:576860-597062:-1
so has part: feature:596708-597062:-1:exon
so has part: feature:583357-583519:-1:exon
so has part: feature:582535-582575:-1:exon
so has part: feature:577069-582126:-1:exon
so has part: feature:576860-576961:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:596708-597062:-1:exon

position:596708:-1
position: 596708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:583357-583519:-1:exon

position:583357:-1
position: 583357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583519:-1
position: 583519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:582535-582575:-1:exon

position:582535:-1
position: 582535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582575:-1
position: 582575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:577069-582126:-1:exon

position:577069:-1
position: 577069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582126:-1
position: 582126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:576860-576961:-1:exon

position:576961:-1
position: 576961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AHDC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: AHDC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AT-hook DNA-binding motif-containing protein 1
translation: MRVKPPGPVVTTSVVRGSPDYVREPKFYPPGHPVQRPPACPAEKALSCSVLSFPEGSCPALGREHQAGSLLHGDPADRCQSVHGGTKAAEDLLGCAGEPRILGGSAEEASARDRAPKTFPNATLASGRCNVDSILALLRSKCGNGHINLHPVVQLIDIMKDLNRLSEDLKNSGVHLDCGSLRGGGGAHEDSRLLPADRDLQYSFFSSPSLANSIRSPEERGVLLKSDPSRHPRPPARDGEADGGGGSAPQPPGHSVGVGDVSKAPADEAGCSQPDASDYSELAEADILNELASLACPGTQLLESQAMEPQPQLLPAQELDSQSRLLDSQSLESQPQLLDSQSLEPLPESLELQNLEPLGLQSLEPLSESLELQSLEPLSESLELQSLEPLAEPLGLQTLEPLPGALEPPLLPTEPSLLEPQPLGTVSELLEAQPGAGDPLRPHGLQPRLGGCPLSTMVKRGPCGGRGGGRCGEDHRKYALRRTDKPKMLCRRRRAGRGRRVDVTPESRVLSPLALPTEMPPGPEEPDTPVLSPPPPPSPTTLDPNEMPKAPPAGKKSKCRGVRKMVVKMAKIPVSLGRRNKTTYKVSSLSSNLNLEGKELAASSSMEPTPLLKMKNNGRNVVVVFPPGEMPIILKRKRGRPPKNLLLGQAKPKEPTPEVKKRRRRKQKLASPQPSYIADTNDSKADYSDVLAKLAFLNRQSQCSGRCSPPRCWTPSEPESIHQAPDTQSISHFLHRVQGFRRRGGKAGGFGGRGGSHAARAARCSFSDFFEGIGKKKKAPSALHADPVHPRKRGRLEPDPVGKPKRKRRARKNGALFPEPSSGQSFGDGPAAEWPGGEKGSPWAPHHGHPGGQAGRNGGYQGAEARPFHAAGLESGSSGRAGFYAGSAPSSQTESGPERHSLFTGYFRSLLDSDDSSDLLDFALSASRSESRKSAAAYTAPPAALPGQRGMAAYTARGGKVPAASPAAEAAFHAAMQGRPAFPPGRASGGYGVTQSSSECRGTESFPKLAPPSAVSRSPTAHPAASGTPGYSPYGSYGSAGQSVAPASVFPAGKQYPSAQDCPNSKDCSFAYGSGSSLPSSPSSAHSAGYAPPTAGPSLPLGKAAFFNSAEQGGQFSSAAHTPLRCDSRASTVSPGGYMVPKGSASFQPSPENCRQFPSAAPWAFRQGYGGLDWSSEAFSQLYNPGFECHLNEPNVILDISNYTPQKAKQQTVSETFSESSSDSTQFNQPAGYRRANSEASSSEGQSSLSSLEKLMMDWNEASSAPGYNWNQSVLFQSNSKPGRGRRKKVDMFDTSHLSFSSSSSSSSVYPSKRNTGPRQPRGSRGACASKKERGTGKAKFPTKSQAVNPLFQESTDLGLDYYSGDSSMSPLPSQSRGFGVGERDPCDYTGPYSMNPSTPSDGTFVQGFQSDSPGLGQPDLESKHFPALPHQLAAPGQQTVFEAGLQKAFSPNCSPTLAFKEDLRAGSIRKLPACDSLKHSMQGGALPHAPHLACRDLPMPQPHYDSPSCKNPPYWYSPNASTRSPSYDGKAGTGMLVDFMGRTDPPCLNPHLSSPSGTHPSKGEKEPLEMSRAHHRGPYACPLINDLNISPVPRDSMLQLQDNYRYPSFAPQGHPVMAPSQKSGFLGPMVEQQHPEDTFTVTSL
SIO_010081: AHDC1
subclass of: SO_0000673
so part of: AHDC1
location: complement(577112..582049)
location: region:577112-582049:-1
so has part: feature:577112-582049:-1:exon

XP_033375487.1
type: Protein
SIO_000068: ncbiprotein

position:577112:-1
position: 577112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582049:-1
position: 582049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577112-582049:-1:exon

FGR
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(634915..644656)
location: region:634915-644656:-1
so has part: feature:634915-644656:-1:exon
subclass of: SO_0000010

107214243
type: Gene
SIO_000068: ncbigene

position:634915:-1
position: 634915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644656:-1
position: 644656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634915-644656:-1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015649444.3
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634915..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639424,639669..639729,644567..644656))
location: region:634915-644656:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:644567-644656:-1:exon

position:644567:-1
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urn:…
SIO_000300: 2
SIO_000628: feature:639669-639729:-1:exon

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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 6
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urn:…
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
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urn:…
SIO_000300: 13
SIO_000628: feature:634915-635145:-1:exon

position:635145:-1
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reference: sequence
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FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015649439.3
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634915..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639729,644567..644656))
location: region:634915-644656:-1
so has part: feature:644567-644656:-1:exon
so has part: feature:639172-639729:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
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so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:644567-644656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639172-639729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634915-635145:-1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015649440.3
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634915..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639729,643801..644232))
location: region:634915-644232:-1
so has part: feature:643801-644232:-1:exon
so has part: feature:639172-639729:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634915-635145:-1:exon

position:644232:-1
position: 644232
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:643801-644232:-1:exon

position:643801:-1
position: 643801
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:639172-639729:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
SIO_000628: feature:638633-638731:-1:exon

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SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636464-636643:-1:exon

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SIO_000300: 9
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634915-635145:-1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015649446.3
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634915..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639424,639669..639729,643801..644228))
location: region:634915-644228:-1
so has part: feature:643801-644228:-1:exon
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so has part: feature:639172-639424:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
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position:644228:-1
position: 644228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643801-644228:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639669-639729:-1:exon

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SIO_000300: 3
SIO_000628: feature:639172-639424:-1:exon

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SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:638633-638731:-1:exon

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SIO_000300: 6
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SIO_000300: 7
SIO_000628: feature:638153-638302:-1:exon

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SIO_000300: 8
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SIO_000300: 9
SIO_000628: feature:636464-636643:-1:exon

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SIO_000300: 10
SIO_000628: feature:636280-636356:-1:exon

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SIO_000300: 11
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634915-635145:-1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015649443.2
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634915..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639424,639669..639729,643444..643617))
location: region:634915-643617:-1
so has part: feature:643444-643617:-1:exon
so has part: feature:639669-639729:-1:exon
so has part: feature:639172-639424:-1:exon
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so has part: feature:636052-636205:-1:exon
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so has part: feature:634915-635145:-1:exon

position:643617:-1
position: 643617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643444-643617:-1:exon

position:643444:-1
position: 643444
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:639669-639729:-1:exon

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SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000628: feature:636464-636643:-1:exon

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SIO_000300: 10
SIO_000628: feature:636280-636356:-1:exon

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SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634915-635145:-1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015649438.2
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634915..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639729,643444..643617))
location: region:634915-643617:-1
so has part: feature:643444-643617:-1:exon
so has part: feature:639172-639729:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:643444-643617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639172-639729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638991-639093:-1:exon

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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 8
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SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634915-635145:-1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015649442.2
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634915..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639424,639669..639729,643437..643617))
location: region:634915-643617:-1
so has part: feature:643437-643617:-1:exon
so has part: feature:639669-639729:-1:exon
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so has part: feature:638991-639093:-1:exon
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so has part: feature:638372-638475:-1:exon
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so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
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so has part: feature:634915-635145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643437-643617:-1:exon

position:643437:-1
position: 643437
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:639669-639729:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
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SIO_000628: feature:636464-636643:-1:exon

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SIO_000300: 10
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634915-635145:-1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015649441.2
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634915..635145,635373..635504,636052..636205,636280..636356,636464..636643,637057..637212,638153..638302,638372..638475,638633..638731,638991..639093,639172..639729,643437..643617))
location: region:634915-643617:-1
so has part: feature:643437-643617:-1:exon
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so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
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so has part: feature:635373-635504:-1:exon
so has part: feature:634915-635145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643437-643617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639172-639729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:637057-637212:-1:exon

position:637057:-1
position: 637057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637212:-1
position: 637212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634915-635145:-1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015649437.2
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634915..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639729,643437..643617))
location: region:634915-643617:-1
so has part: feature:643437-643617:-1:exon
so has part: feature:639172-639729:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634915-635145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643437-643617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639172-639729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634915-635145:-1:exon

FGR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGR
product: FGR proto-oncogene, Src family tyrosine kinase, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019008894.1
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634915..635145,635373..635504,636052..636205,636280..636356,636464..636643,637057..637212,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639729,643437..643617))
location: region:634915-643617:-1
so has part: feature:643437-643617:-1:exon
so has part: feature:639172-639729:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:637057-637212:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634915-635145:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643437-643617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:639172-639729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637057-637212:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:634915-635145:-1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X2
translation: MGAHPAPCRAHGPSVPQAVPGMGCVPCKEKGAGKGQAGGEGGSLQPPASQYDPDPTQPGAAFTRIPDFNNFQGPAVPLAPSFAEPGGFTSSVLQTRSGGITGGGVTLFIALYDYEARTEDDLSFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHTNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIEYNDGLCHLLTHPCPAVKPQTLGLAKDAWEIARESITLDGKLGMGCFGAVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGCYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKRDPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634937..635145,635373..635504,636052..636205,636280..636356,636464..636643,637057..637212,638153..638302,638372..638475,638633..638731,638991..639093,639172..639475))
location: region:634937-639475:-1
so has part: feature:639172-639475:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637057-637212:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634937-635145:-1:exon

XP_015504927.1
type: Protein
SIO_000068: ncbiprotein

position:634937:-1
position: 634937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639475:-1
position: 639475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639172-639475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637057-637212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634937-635145:-1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X1
translation: MGAHPAPCRAHGPSVPQAVPGMGCVPCKEKGAGKGQAGGEGGSLQPPASQYDPDPTQPGAAFTRIPDFNNFQGPAVPLAPSFAEPGGFTSSVLQTRSGGITGGGVTLFIALYDYEARTEDDLSFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHTNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGCYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKRDPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634937..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639475))
location: region:634937-639475:-1
so has part: feature:639172-639475:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634937-635145:-1:exon

XP_015504923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639172-639475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634937-635145:-1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X1
translation: MGAHPAPCRAHGPSVPQAVPGMGCVPCKEKGAGKGQAGGEGGSLQPPASQYDPDPTQPGAAFTRIPDFNNFQGPAVPLAPSFAEPGGFTSSVLQTRSGGITGGGVTLFIALYDYEARTEDDLSFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHTNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGCYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKRDPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634937..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639475))
location: region:634937-639475:-1
so has part: feature:639172-639475:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634937-635145:-1:exon

XP_015504924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639172-639475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634937-635145:-1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X1
translation: MGAHPAPCRAHGPSVPQAVPGMGCVPCKEKGAGKGQAGGEGGSLQPPASQYDPDPTQPGAAFTRIPDFNNFQGPAVPLAPSFAEPGGFTSSVLQTRSGGITGGGVTLFIALYDYEARTEDDLSFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHTNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGCYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKRDPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634937..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639475))
location: region:634937-639475:-1
so has part: feature:639172-639475:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634937-635145:-1:exon

XP_015504925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639172-639475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634937-635145:-1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X1
translation: MGAHPAPCRAHGPSVPQAVPGMGCVPCKEKGAGKGQAGGEGGSLQPPASQYDPDPTQPGAAFTRIPDFNNFQGPAVPLAPSFAEPGGFTSSVLQTRSGGITGGGVTLFIALYDYEARTEDDLSFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHTNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGCYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKRDPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634937..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639475))
location: region:634937-639475:-1
so has part: feature:639172-639475:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634937-635145:-1:exon

XP_015504926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639172-639475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634937-635145:-1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X4
translation: MGAHPAPCRAHGPSVPQAVPGMGCVPCKEKGAGKGQAGGEGGSLQPPASQYDPDPTQPGAAFTRIPDFNNFQGPAVPLAPSFAEPGGFTSSVLQTRSGGITGGGVTLFIALYDYEARTEDDLSFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHTNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMEYNDGLCHLLTHPCPAVKPQTLGLAKDAWEIARESITLDGKLGMGCFGAVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGCYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKRDPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634937..635145,635373..635504,636052..636205,636280..636356,636464..636643,637057..637212,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639475))
location: region:634937-639475:-1
so has part: feature:639172-639475:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:637057-637212:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634937-635145:-1:exon

XP_018864439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639172-639475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:637057-637212:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:634937-635145:-1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X3
translation: MGCVPCKEKGAGKGQAGGEGGSLQPPASQYDPDPTQPGAAFTRIPDFNNFQGPAVPLAPSFAEPGGFTSSVLQTRSGGITGGGVTLFIALYDYEARTEDDLSFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHTNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGCYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKRDPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634937..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639412))
location: region:634937-639412:-1
so has part: feature:639172-639412:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634937-635145:-1:exon

XP_015504928.1
type: Protein
SIO_000068: ncbiprotein

position:639412:-1
position: 639412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639172-639412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634937-635145:-1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X3
translation: MGCVPCKEKGAGKGQAGGEGGSLQPPASQYDPDPTQPGAAFTRIPDFNNFQGPAVPLAPSFAEPGGFTSSVLQTRSGGITGGGVTLFIALYDYEARTEDDLSFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHTNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGCYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKRDPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634937..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639412))
location: region:634937-639412:-1
so has part: feature:639172-639412:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634937-635145:-1:exon

XP_015504929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639172-639412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634937-635145:-1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X3
translation: MGCVPCKEKGAGKGQAGGEGGSLQPPASQYDPDPTQPGAAFTRIPDFNNFQGPAVPLAPSFAEPGGFTSSVLQTRSGGITGGGVTLFIALYDYEARTEDDLSFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHTNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGCYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKRDPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634937..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639412))
location: region:634937-639412:-1
so has part: feature:639172-639412:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634937-635145:-1:exon

XP_015504930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639172-639412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634937-635145:-1:exon

FGR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase Fgr isoform X3
translation: MGCVPCKEKGAGKGQAGGEGGSLQPPASQYDPDPTQPGAAFTRIPDFNNFQGPAVPLAPSFAEPGGFTSSVLQTRSGGITGGGVTLFIALYDYEARTEDDLSFQKGEKFHIINNTEGDWWEARSLSSGATGYIPSNYVAPVDSIQAEEWYFGKIGRKDAERQLLCHTNCRGTFLIRESETTKGAYSLSIRDWDEAKGDHVKHYKIRKLDSGGYYITTRAQFSTVQQLVQHYIERAAGLCCRLAVPCHKGTPKLADLSVKTKDVWEIPRESLQLLKKLGNGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLEEAQIMKRLRHDKLVQLYAVVSEEPIYIVTEFMSQGSLLDFLKDGDGCYLKLPQLVDMAAQIAAGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDDEYTARQGAKFPIKWTAPEAALFGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMQCPGSCPPSLHEVMVQCWKRDPEERPTFEYLQSFLEDYFTATEPQYQPGDNQ
SIO_010081: FGR
subclass of: SO_0000673
so part of: FGR
location: complement(join(634937..635145,635373..635504,636052..636205,636280..636356,636464..636643,637576..637740,638153..638302,638372..638475,638633..638731,638991..639093,639172..639412))
location: region:634937-639412:-1
so has part: feature:639172-639412:-1:exon
so has part: feature:638991-639093:-1:exon
so has part: feature:638633-638731:-1:exon
so has part: feature:638372-638475:-1:exon
so has part: feature:638153-638302:-1:exon
so has part: feature:637576-637740:-1:exon
so has part: feature:636464-636643:-1:exon
so has part: feature:636280-636356:-1:exon
so has part: feature:636052-636205:-1:exon
so has part: feature:635373-635504:-1:exon
so has part: feature:634937-635145:-1:exon

XP_015504932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:639172-639412:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638991-639093:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:638633-638731:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:638372-638475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638153-638302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:637576-637740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:636464-636643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636280-636356:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:636052-636205:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635373-635504:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:634937-635145:-1:exon

LOC107214244
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107214244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 644755..650536
location: region:644755-650536:1
so has part: feature:644755-650536:1:exon
subclass of: SO_0000010

107214244
type: Gene
SIO_000068: ncbigene

position:644755:1
position: 644755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650536:1
position: 650536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644755-650536:1:exon

LOC107214244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214244
product: digestive cysteine proteinase 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_015649447.2
SIO_010081: LOC107214244
subclass of: SO_0000673
so part of: LOC107214244
location: join(644755..644904,645979..646038,646277..646369,646455..646627,647328..647571,647643..647835,647934..648127,648731..648822,648907..649068,649645..649834,650169..650536)
location: region:644755-650536:1
so has part: feature:644755-644904:1:exon
so has part: feature:645979-646038:1:exon
so has part: feature:646277-646369:1:exon
so has part: feature:646455-646627:1:exon
so has part: feature:647328-647571:1:exon
so has part: feature:647643-647835:1:exon
so has part: feature:647934-648127:1:exon
so has part: feature:648731-648822:1:exon
so has part: feature:648907-649068:1:exon
so has part: feature:649645-649834:1:exon
so has part: feature:650169-650536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644755-644904:1:exon

position:644904:1
position: 644904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:645979-646038:1:exon

position:645979:1
position: 645979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646038:1
position: 646038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:646277-646369:1:exon

position:646277:1
position: 646277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646369:1
position: 646369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:646455-646627:1:exon

position:646455:1
position: 646455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646627:1
position: 646627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:647328-647571:1:exon

position:647328:1
position: 647328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647571:1
position: 647571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:647643-647835:1:exon

position:647643:1
position: 647643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647835:1
position: 647835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:647934-648127:1:exon

position:647934:1
position: 647934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648127:1
position: 648127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:648731-648822:1:exon

position:648731:1
position: 648731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648822:1
position: 648822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:648907-649068:1:exon

position:648907:1
position: 648907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649068:1
position: 649068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:649645-649834:1:exon

position:649645:1
position: 649645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649834:1
position: 649834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:650169-650536:1:exon

position:650169:1
position: 650169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107214244
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107214244
product: digestive cysteine proteinase 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015649448.2
SIO_010081: LOC107214244
subclass of: SO_0000673
so part of: LOC107214244
location: join(644755..644904,646277..646369,646455..646627,647328..647571,647643..647835,647934..648127,648731..648822,648907..649068,649645..649834,650169..650536)
location: region:644755-650536:1
so has part: feature:644755-644904:1:exon
so has part: feature:646277-646369:1:exon
so has part: feature:646455-646627:1:exon
so has part: feature:647328-647571:1:exon
so has part: feature:647643-647835:1:exon
so has part: feature:647934-648127:1:exon
so has part: feature:648731-648822:1:exon
so has part: feature:648907-649068:1:exon
so has part: feature:649645-649834:1:exon
so has part: feature:650169-650536:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644755-644904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646277-646369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646455-646627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647328-647571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647643-647835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647934-648127:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:648731-648822:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648907-649068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649645-649834:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650169-650536:1:exon

LOC107214244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: digestive cysteine proteinase 1-like isoform X1
translation: MGVLRWLVASALCIAVRGQDYGLSRPPPHFGSIYHVRGVIKLPYAEIEEPFEAWYNLTGNKSRIQYYGGQVITYQLAAVKPYGMRYKITPETTEKEVNTRKCFQLPGSKEDVVTAQSVFPSMRGFKFLREEYYEGRYCAVWQNVTRWAQKKNVYTLWVTNSSCGVAPVHYEMRGYNTLLGSHYDKYEIAYTDFDNSYPPSIFNLPVNETKCGVLPGNAAEHRVLANPMEDLVGQHRPWAHRVFHDYRRRMGRRYSSERELEHRQSIFVHNMRFVHSRNRAALSYTLALNHLADRTPQELAALRGRRRSGTPNNGLPFPSELYASIILPESLDWRMYGAVTPVKDQAVCGSCWSFATTGAMEGALFLKTGVLTPLSQQVLIDCSWGFGNYACDGGEEWRAYEWIKKHGGIASTESYGTYKGQNGLCHYNQSEMLAKITGYVNVTSGNITAVKAAIYKHGPVAVSIDASHKTFSFYSNGIYYEPKCDNTPGSLDHAVLAVGYGVLQGETYWLIKNSWSTYWGNNGYILMAMKDNNCGVATEATYPILA
SIO_010081: LOC107214244
subclass of: SO_0000673
so part of: LOC107214244
location: join(644853..644904,645979..646038,646277..646369,646455..646627,647328..647571,647643..647835,647934..648127,648731..648822,648907..649068,649645..649834,650169..650356)
location: region:644853-650356:1
so has part: feature:644853-644904:1:exon
so has part: feature:645979-646038:1:exon
so has part: feature:646277-646369:1:exon
so has part: feature:646455-646627:1:exon
so has part: feature:647328-647571:1:exon
so has part: feature:647643-647835:1:exon
so has part: feature:647934-648127:1:exon
so has part: feature:648731-648822:1:exon
so has part: feature:648907-649068:1:exon
so has part: feature:649645-649834:1:exon
so has part: feature:650169-650356:1:exon

XP_015504933.1
type: Protein
SIO_000068: ncbiprotein

position:644853:1
position: 644853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650356:1
position: 650356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644853-644904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645979-646038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646277-646369:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:646455-646627:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647328-647571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647643-647835:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647934-648127:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648731-648822:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648907-649068:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:649645-649834:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:650169-650356:1:exon

LOC107214244
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107214244
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: digestive cysteine proteinase 1-like isoform X2
translation: MGVLRWLVASALCIAVRGVIKLPYAEIEEPFEAWYNLTGNKSRIQYYGGQVITYQLAAVKPYGMRYKITPETTEKEVNTRKCFQLPGSKEDVVTAQSVFPSMRGFKFLREEYYEGRYCAVWQNVTRWAQKKNVYTLWVTNSSCGVAPVHYEMRGYNTLLGSHYDKYEIAYTDFDNSYPPSIFNLPVNETKCGVLPGNAAEHRVLANPMEDLVGQHRPWAHRVFHDYRRRMGRRYSSERELEHRQSIFVHNMRFVHSRNRAALSYTLALNHLADRTPQELAALRGRRRSGTPNNGLPFPSELYASIILPESLDWRMYGAVTPVKDQAVCGSCWSFATTGAMEGALFLKTGVLTPLSQQVLIDCSWGFGNYACDGGEEWRAYEWIKKHGGIASTESYGTYKGQNGLCHYNQSEMLAKITGYVNVTSGNITAVKAAIYKHGPVAVSIDASHKTFSFYSNGIYYEPKCDNTPGSLDHAVLAVGYGVLQGETYWLIKNSWSTYWGNNGYILMAMKDNNCGVATEATYPILA
SIO_010081: LOC107214244
subclass of: SO_0000673
so part of: LOC107214244
location: join(644853..644904,646277..646369,646455..646627,647328..647571,647643..647835,647934..648127,648731..648822,648907..649068,649645..649834,650169..650356)
location: region:644853-650356:1
so has part: feature:644853-644904:1:exon
so has part: feature:646277-646369:1:exon
so has part: feature:646455-646627:1:exon
so has part: feature:647328-647571:1:exon
so has part: feature:647643-647835:1:exon
so has part: feature:647934-648127:1:exon
so has part: feature:648731-648822:1:exon
so has part: feature:648907-649068:1:exon
so has part: feature:649645-649834:1:exon
so has part: feature:650169-650356:1:exon

XP_015504934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:644853-644904:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646277-646369:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646455-646627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647328-647571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647643-647835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647934-648127:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:648731-648822:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:648907-649068:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:649645-649834:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:650169-650356:1:exon

SESN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SESN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 660584..684770
location: region:660584-684770:1
so has part: feature:660584-684770:1:exon
subclass of: SO_0000010

107214188
type: Gene
SIO_000068: ncbigene

position:660584:1
position: 660584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684770:1
position: 684770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660584-684770:1:exon

SESN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SESN2
product: sestrin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033519545.1
SIO_010081: SESN2
subclass of: SO_0000673
so part of: SESN2
location: join(660584..660598,660983..661069,661877..662008,667132..667267,667724..667825,676841..676906,677329..677547,677687..677878,678197..678379,678631..678840,681758..681908,682077..682192,682955..683145,683544..683688,683767..684770)
location: region:660584-684770:1
so has part: feature:660584-660598:1:exon
so has part: feature:660983-661069:1:exon
so has part: feature:661877-662008:1:exon
so has part: feature:667132-667267:1:exon
so has part: feature:667724-667825:1:exon
so has part: feature:676841-676906:1:exon
so has part: feature:677329-677547:1:exon
so has part: feature:677687-677878:1:exon
so has part: feature:678197-678379:1:exon
so has part: feature:678631-678840:1:exon
so has part: feature:681758-681908:1:exon
so has part: feature:682077-682192:1:exon
so has part: feature:682955-683145:1:exon
so has part: feature:683544-683688:1:exon
so has part: feature:683767-684770:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660584-660598:1:exon

position:660598:1
position: 660598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660983-661069:1:exon

position:660983:1
position: 660983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661069:1
position: 661069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661877-662008:1:exon

position:661877:1
position: 661877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662008:1
position: 662008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:667132-667267:1:exon

position:667132:1
position: 667132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667267:1
position: 667267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:667724-667825:1:exon

position:667724:1
position: 667724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667825:1
position: 667825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:676841-676906:1:exon

position:676841:1
position: 676841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676906:1
position: 676906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:677329-677547:1:exon

position:677329:1
position: 677329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677547:1
position: 677547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:677687-677878:1:exon

position:677687:1
position: 677687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677878:1
position: 677878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:678197-678379:1:exon

position:678197:1
position: 678197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678379:1
position: 678379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:678631-678840:1:exon

position:678631:1
position: 678631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678840:1
position: 678840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:681758-681908:1:exon

position:681758:1
position: 681758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681908:1
position: 681908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:682077-682192:1:exon

position:682077:1
position: 682077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682192:1
position: 682192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:682955-683145:1:exon

position:682955:1
position: 682955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683145:1
position: 683145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:683544-683688:1:exon

position:683544:1
position: 683544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683688:1
position: 683688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:683767-684770:1:exon

position:683767:1
position: 683767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SESN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SESN2
product: sestrin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033519546.1
SIO_010081: SESN2
subclass of: SO_0000673
so part of: SESN2
location: join(660584..660598,660983..661069,661877..662008,667132..667267,667724..667825,676841..676906,677329..677547,677687..677878,678197..678379,678631..678840,681758..681908,682077..682192,682955..683203,683544..683635)
location: region:660584-683635:1
so has part: feature:660584-660598:1:exon
so has part: feature:660983-661069:1:exon
so has part: feature:661877-662008:1:exon
so has part: feature:667132-667267:1:exon
so has part: feature:667724-667825:1:exon
so has part: feature:676841-676906:1:exon
so has part: feature:677329-677547:1:exon
so has part: feature:677687-677878:1:exon
so has part: feature:678197-678379:1:exon
so has part: feature:678631-678840:1:exon
so has part: feature:681758-681908:1:exon
so has part: feature:682077-682192:1:exon
so has part: feature:682955-683203:1:exon
so has part: feature:683544-683635:1:exon

position:683635:1
position: 683635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660584-660598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660983-661069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661877-662008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667132-667267:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667724-667825:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:676841-676906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:677329-677547:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:677687-677878:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:678197-678379:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:678631-678840:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:681758-681908:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:682077-682192:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:682955-683203:1:exon

position:683203:1
position: 683203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:683544-683635:1:exon

SESN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SESN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-2 isoform X1
translation: MLCPLIQRAPSRLAQWAASQQTLGAHHCPVAQGIDILNFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADLQYQESQMRAKMNQMEKTHKEVMEQLQERGIKAPRELARSPSTFIPLGEAEIALCFRHCAGGPTPISPPLRSRVQTNNPTHRLSWTGCVGSAMETPKHPLPPGAGSGGHRRCPFRRRGASNGIPQEGGESLHQLLEAFLSAGRVDHIAMVMGLHPQYLSIFWKTQYLLLRMDGPLPYHKRHYIAIMAAARHRCSYLVGLHMGEFLQVGGDPAWLQGLHCAPQKLRNLNEINKLLAHRPWLITKEHIEALLKPGEDSWSLAELVQALVLLTHYHSLASFVFGCGIKREEDQDVGNGCWAPSAHSNSSAASDDSMGGSGGTDAAQEVEVLMERMKLLQEHQLEEEGVTQEEMATRFELQKTESLLVPSSDILDPSLQSSIRCFLEDPEFGYKDFTRRGEQAPPTFRAQDYTWEDHGYSLINRLYPDMGQLLDEKFQVVYNLTYNTIAMHCGVDTSVLRRAIWNYVHCVFGIRYDDYDYGEVNQLLERNLKIYIKTVACYPEKTTKQIYTQSWRHFKHSEKVHINLLLLEARMQAALLYALRAVTRYMT
SIO_010081: SESN2
subclass of: SO_0000673
so part of: SESN2
location: join(661896..662008,667132..667267,667724..667825,676841..676906,677329..677547,677687..677878,678197..678379,678631..678840,681758..681908,682077..682192,682955..683145,683544..683688,683767..683853)
location: region:661896-683853:1
so has part: feature:661896-662008:1:exon
so has part: feature:667132-667267:1:exon
so has part: feature:667724-667825:1:exon
so has part: feature:676841-676906:1:exon
so has part: feature:677329-677547:1:exon
so has part: feature:677687-677878:1:exon
so has part: feature:678197-678379:1:exon
so has part: feature:678631-678840:1:exon
so has part: feature:681758-681908:1:exon
so has part: feature:682077-682192:1:exon
so has part: feature:682955-683145:1:exon
so has part: feature:683544-683688:1:exon
so has part: feature:683767-683853:1:exon

XP_033375436.1
type: Protein
SIO_000068: ncbiprotein

position:661896:1
position: 661896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683853:1
position: 683853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661896-662008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667132-667267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667724-667825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676841-676906:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677329-677547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:677687-677878:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:678197-678379:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:678631-678840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:681758-681908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:682077-682192:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:682955-683145:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:683544-683688:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:683767-683853:1:exon

SESN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SESN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-2 isoform X2
translation: MLCPLIQRAPSRLAQWAASQQTLGAHHCPVAQGIDILNFSPDLALDSPGTDHFVIIAQLKEEVATLKKMLHQKDQMILEKEKKITELKADLQYQESQMRAKMNQMEKTHKEVMEQLQERGIKAPRELARSPSTFIPLGEAEIALCFRHCAGGPTPISPPLRSRVQTNNPTHRLSWTGCVGSAMETPKHPLPPGAGSGGHRRCPFRRRGASNGIPQEGGESLHQLLEAFLSAGRVDHIAMVMGLHPQYLSIFWKTQYLLLRMDGPLPYHKRHYIAIMAAARHRCSYLVGLHMGEFLQVGGDPAWLQGLHCAPQKLRNLNEINKLLAHRPWLITKEHIEALLKPGEDSWSLAELVQALVLLTHYHSLASFVFGCGIKREEDQDVGNGCWAPSAHSNSSAASDDSMGGSGGTDAAQEVEVLMERMKLLQEHQLEEEGVTQEEMATRFELQKTESLLVPSSDILDPSLQSSIRCFLEDPEFGYKDFTRRGEQAPPTFRAQDYTWEDHGYSLINRLYPDMGQLLDEKFQVVYNLTYNTIAMHCGVDTSVLRRAIWNYVHCVFGIRYNPKRGWSFFSALGRAQEQL
SIO_010081: SESN2
subclass of: SO_0000673
so part of: SESN2
location: join(661896..662008,667132..667267,667724..667825,676841..676906,677329..677547,677687..677878,678197..678379,678631..678840,681758..681908,682077..682192,682955..683203,683544..683549)
location: region:661896-683549:1
so has part: feature:661896-662008:1:exon
so has part: feature:667132-667267:1:exon
so has part: feature:667724-667825:1:exon
so has part: feature:676841-676906:1:exon
so has part: feature:677329-677547:1:exon
so has part: feature:677687-677878:1:exon
so has part: feature:678197-678379:1:exon
so has part: feature:678631-678840:1:exon
so has part: feature:681758-681908:1:exon
so has part: feature:682077-682192:1:exon
so has part: feature:682955-683203:1:exon
so has part: feature:683544-683549:1:exon

XP_033375437.1
type: Protein
SIO_000068: ncbiprotein

position:683549:1
position: 683549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:661896-662008:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667132-667267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:667724-667825:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:676841-676906:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:677329-677547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:677687-677878:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:678197-678379:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:678631-678840:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:681758-681908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:682077-682192:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:682955-683203:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:683544-683549:1:exon

PHACTR4
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 686840..746100
location: region:686840-746100:1
so has part: feature:686840-746100:1:exon
subclass of: SO_0000010

107214177
type: Gene
SIO_000068: ncbigene

position:686840:1
position: 686840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746100:1
position: 746100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686840-746100:1:exon

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_015649303.3
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: join(686840..686868,707403..707449,733039..733215,733627..733707,735255..735419,735548..735907,738698..739277,739884..740101,740567..740717,741321..741376,742314..742375,743147..743284,744197..744273,744816..746100)
location: region:686840-746100:1
so has part: feature:686840-686868:1:exon
so has part: feature:707403-707449:1:exon
so has part: feature:733039-733215:1:exon
so has part: feature:733627-733707:1:exon
so has part: feature:735255-735419:1:exon
so has part: feature:735548-735907:1:exon
so has part: feature:738698-739277:1:exon
so has part: feature:739884-740101:1:exon
so has part: feature:740567-740717:1:exon
so has part: feature:741321-741376:1:exon
so has part: feature:742314-742375:1:exon
so has part: feature:743147-743284:1:exon
so has part: feature:744197-744273:1:exon
so has part: feature:744816-746100:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686840-686868:1:exon

position:686868:1
position: 686868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707403-707449:1:exon

position:707403:1
position: 707403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707449:1
position: 707449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:733039-733215:1:exon

position:733039:1
position: 733039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733215:1
position: 733215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:733627-733707:1:exon

position:733627:1
position: 733627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:733707:1
position: 733707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:735255-735419:1:exon

position:735255:1
position: 735255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735419:1
position: 735419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:735548-735907:1:exon

position:735548:1
position: 735548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735907:1
position: 735907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:738698-739277:1:exon

position:738698:1
position: 738698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739277:1
position: 739277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:739884-740101:1:exon

position:739884:1
position: 739884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740101:1
position: 740101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:740567-740717:1:exon

position:740567:1
position: 740567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:740717:1
position: 740717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:741321-741376:1:exon

position:741321:1
position: 741321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741376:1
position: 741376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:742314-742375:1:exon

position:742314:1
position: 742314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:742375:1
position: 742375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:743147-743284:1:exon

position:743147:1
position: 743147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743284:1
position: 743284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:744197-744273:1:exon

position:744197:1
position: 744197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744273:1
position: 744273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:744816-746100:1:exon

position:744816:1
position: 744816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015649301.3
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: join(696502..696657,707403..707449,733039..733215,733627..733707,735255..735419,735548..735907,738698..739277,739884..740101,740567..740717,741321..741376,742314..742375,743147..743284,744197..744273,744816..746100)
location: region:696502-746100:1
so has part: feature:696502-696657:1:exon
so has part: feature:707403-707449:1:exon
so has part: feature:733039-733215:1:exon
so has part: feature:733627-733707:1:exon
so has part: feature:735255-735419:1:exon
so has part: feature:735548-735907:1:exon
so has part: feature:738698-739277:1:exon
so has part: feature:739884-740101:1:exon
so has part: feature:740567-740717:1:exon
so has part: feature:741321-741376:1:exon
so has part: feature:742314-742375:1:exon
so has part: feature:743147-743284:1:exon
so has part: feature:744197-744273:1:exon
so has part: feature:744816-746100:1:exon

position:696502:1
position: 696502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:696502-696657:1:exon

position:696657:1
position: 696657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:707403-707449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733039-733215:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:733627-733707:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735255-735419:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:735548-735907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:738698-739277:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:739884-740101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:740567-740717:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:741321-741376:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:742314-742375:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:743147-743284:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:744197-744273:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:744816-746100:1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X2
translation: MEENAAEEVDHTPGDASMGVDVLESGDTTPPTKRKSKFSSFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEEPEQDGEEPEKLNPPALKNGHTIPIGGPGVCNLPSQEEEATKSSSLRKPLPVEEPKKRQGSSSSHPGPELEPPQEPHVPRQPLLPPKRPPSTSQEANEVQARDPTPSSSAARTAPFSTAPTAAKTVNSTAAPSPAPRTLLPAPTSANTTAPTSTTSSAPAKQPPVPPPKPVNRNSNSLIAELSQVMTSGTALSKPSPPLPPKRGLLPNNMSEAVTSKPPGDRTVTASRPAPIPLHVTSAYPPPSPSPPLPTHVPPEPARVALPASTPVLDPLHSLDLPKETPPPPPEDFRSMEVSKRTAEQGFGEAHVLPRLPQIPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDAFGEDNGTLGRTRSLPVTIEMLKVPDDEEEEEDDQEEEQNSGPRVYIGDVASVTVIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDDEEEDESHNSTLANKVKRKDTLAIKLGNTAAPQEEKITFPRKSKEEWNEIRHQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEESKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: join(707434..707449,733039..733215,733627..733707,735255..735419,735548..735907,738698..739277,739884..740101,740567..740717,741321..741376,742314..742375,743147..743284,744197..744273,744816..744831)
location: region:707434-744831:1
so has part: feature:707434-707449:1:exon
so has part: feature:733039-733215:1:exon
so has part: feature:733627-733707:1:exon
so has part: feature:735255-735419:1:exon
so has part: feature:735548-735907:1:exon
so has part: feature:738698-739277:1:exon
so has part: feature:739884-740101:1:exon
so has part: feature:740567-740717:1:exon
so has part: feature:741321-741376:1:exon
so has part: feature:742314-742375:1:exon
so has part: feature:743147-743284:1:exon
so has part: feature:744197-744273:1:exon
so has part: feature:744816-744831:1:exon

XP_015504787.1
type: Protein
SIO_000068: ncbiprotein

position:707434:1
position: 707434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744831:1
position: 744831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707434-707449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:733039-733215:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733627-733707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735255-735419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735548-735907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:738698-739277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739884-740101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740567-740717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741321-741376:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:742314-742375:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:743147-743284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744197-744273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:744816-744831:1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X2
translation: MEENAAEEVDHTPGDASMGVDVLESGDTTPPTKRKSKFSSFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEEPEQDGEEPEKLNPPALKNGHTIPIGGPGVCNLPSQEEEATKSSSLRKPLPVEEPKKRQGSSSSHPGPELEPPQEPHVPRQPLLPPKRPPSTSQEANEVQARDPTPSSSAARTAPFSTAPTAAKTVNSTAAPSPAPRTLLPAPTSANTTAPTSTTSSAPAKQPPVPPPKPVNRNSNSLIAELSQVMTSGTALSKPSPPLPPKRGLLPNNMSEAVTSKPPGDRTVTASRPAPIPLHVTSAYPPPSPSPPLPTHVPPEPARVALPASTPVLDPLHSLDLPKETPPPPPEDFRSMEVSKRTAEQGFGEAHVLPRLPQIPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDAFGEDNGTLGRTRSLPVTIEMLKVPDDEEEEEDDQEEEQNSGPRVYIGDVASVTVIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDDEEEDESHNSTLANKVKRKDTLAIKLGNTAAPQEEKITFPRKSKEEWNEIRHQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEESKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: join(707434..707449,733039..733215,733627..733707,735255..735419,735548..735907,738698..739277,739884..740101,740567..740717,741321..741376,742314..742375,743147..743284,744197..744273,744816..744831)
location: region:707434-744831:1
so has part: feature:707434-707449:1:exon
so has part: feature:733039-733215:1:exon
so has part: feature:733627-733707:1:exon
so has part: feature:735255-735419:1:exon
so has part: feature:735548-735907:1:exon
so has part: feature:738698-739277:1:exon
so has part: feature:739884-740101:1:exon
so has part: feature:740567-740717:1:exon
so has part: feature:741321-741376:1:exon
so has part: feature:742314-742375:1:exon
so has part: feature:743147-743284:1:exon
so has part: feature:744197-744273:1:exon
so has part: feature:744816-744831:1:exon

XP_015504789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:707434-707449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:733039-733215:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733627-733707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735255-735419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735548-735907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:738698-739277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739884-740101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740567-740717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741321-741376:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:742314-742375:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:743147-743284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744197-744273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:744816-744831:1:exon

PHACTR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PHACTR4
product: phosphatase and actin regulator 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015649304.2
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: join(724993..725271,733039..733215,733627..733707,735255..735419,735548..735907,738698..739277,739884..740101,740567..740717,741321..741376,742314..742375,743147..743284,744197..744273,744816..746100)
location: region:724993-746100:1
so has part: feature:724993-725271:1:exon
so has part: feature:733039-733215:1:exon
so has part: feature:733627-733707:1:exon
so has part: feature:735255-735419:1:exon
so has part: feature:735548-735907:1:exon
so has part: feature:738698-739277:1:exon
so has part: feature:739884-740101:1:exon
so has part: feature:740567-740717:1:exon
so has part: feature:741321-741376:1:exon
so has part: feature:742314-742375:1:exon
so has part: feature:743147-743284:1:exon
so has part: feature:744197-744273:1:exon
so has part: feature:744816-746100:1:exon

position:724993:1
position: 724993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724993-725271:1:exon

position:725271:1
position: 725271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:733039-733215:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733627-733707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735255-735419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735548-735907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:738698-739277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739884-740101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740567-740717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741321-741376:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:742314-742375:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:743147-743284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744197-744273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:744816-746100:1:exon

PHACTR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PHACTR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatase and actin regulator 4 isoform X1
translation: MGQPHFSSPVKPGACAEEVDHTPGDASMGVDVLESGDTTPPTKRKSKFSSFGKIFKPWKWRKKKSSDKFKETSEVLERKISMRKPREELVKRGVLLEEPEQDGEEPEKLNPPALKNGHTIPIGGPGVCNLPSQEEEATKSSSLRKPLPVEEPKKRQGSSSSHPGPELEPPQEPHVPRQPLLPPKRPPSTSQEANEVQARDPTPSSSAARTAPFSTAPTAAKTVNSTAAPSPAPRTLLPAPTSANTTAPTSTTSSAPAKQPPVPPPKPVNRNSNSLIAELSQVMTSGTALSKPSPPLPPKRGLLPNNMSEAVTSKPPGDRTVTASRPAPIPLHVTSAYPPPSPSPPLPTHVPPEPARVALPASTPVLDPLHSLDLPKETPPPPPEDFRSMEVSKRTAEQGFGEAHVLPRLPQIPLHIRIQQALASPLPVTPPPEGSHRAHSLLFENDAFGEDNGTLGRTRSLPVTIEMLKVPDDEEEEEDDQEEEQNSGPRVYIGDVASVTVIPKLVPQVLPEEQEGDEGMSDSDSEGPILYKDDEEEDESHNSTLANKVKRKDTLAIKLGNTAAPQEEKITFPRKSKEEWNEIRHQIGTTLIRRLSQRPTAEELEQRNILQPKNEADRQAEKREIKRRLTRKLSQRPTVAELQARKILRFNEYVEVTDAQDYDRRADKPWTKLTPADKAAIRKELNEFKSCEMEVHEESKQFTRYHRP
SIO_010081: PHACTR4
subclass of: SO_0000673
so part of: PHACTR4
location: join(725226..725271,733039..733215,733627..733707,735255..735419,735548..735907,738698..739277,739884..740101,740567..740717,741321..741376,742314..742375,743147..743284,744197..744273,744816..744831)
location: region:725226-744831:1
so has part: feature:725226-725271:1:exon
so has part: feature:733039-733215:1:exon
so has part: feature:733627-733707:1:exon
so has part: feature:735255-735419:1:exon
so has part: feature:735548-735907:1:exon
so has part: feature:738698-739277:1:exon
so has part: feature:739884-740101:1:exon
so has part: feature:740567-740717:1:exon
so has part: feature:741321-741376:1:exon
so has part: feature:742314-742375:1:exon
so has part: feature:743147-743284:1:exon
so has part: feature:744197-744273:1:exon
so has part: feature:744816-744831:1:exon

XP_015504790.1
type: Protein
SIO_000068: ncbiprotein

position:725226:1
position: 725226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725226-725271:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:733039-733215:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733627-733707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:735255-735419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:735548-735907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:738698-739277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739884-740101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:740567-740717:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:741321-741376:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:742314-742375:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:743147-743284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:744197-744273:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:744816-744831:1:exon

RCC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 746386..756067
location: region:746386-756067:1
so has part: feature:746386-756067:1:exon
subclass of: SO_0000010

107214260
type: Gene
SIO_000068: ncbigene

position:746386:1
position: 746386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756067:1
position: 756067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746386-756067:1:exon

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_015649481.2
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: join(746386..746430,746635..746692,747101..747142,750254..750331,750434..750621,751181..751360,751446..751542,752726..752848,753031..753186,753524..753643,754027..754179,754694..756067)
location: region:746386-756067:1
so has part: feature:746386-746430:1:exon
so has part: feature:746635-746692:1:exon
so has part: feature:747101-747142:1:exon
so has part: feature:750254-750331:1:exon
so has part: feature:750434-750621:1:exon
so has part: feature:751181-751360:1:exon
so has part: feature:751446-751542:1:exon
so has part: feature:752726-752848:1:exon
so has part: feature:753031-753186:1:exon
so has part: feature:753524-753643:1:exon
so has part: feature:754027-754179:1:exon
so has part: feature:754694-756067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:746386-746430:1:exon

position:746430:1
position: 746430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:746635-746692:1:exon

position:746635:1
position: 746635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746692:1
position: 746692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:747101-747142:1:exon

position:747101:1
position: 747101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747142:1
position: 747142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:750254-750331:1:exon

position:750254:1
position: 750254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750331:1
position: 750331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:750434-750621:1:exon

position:750434:1
position: 750434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750621:1
position: 750621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:751181-751360:1:exon

position:751181:1
position: 751181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751360:1
position: 751360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:751446-751542:1:exon

position:751446:1
position: 751446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751542:1
position: 751542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:752726-752848:1:exon

position:752726:1
position: 752726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752848:1
position: 752848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:753031-753186:1:exon

position:753031:1
position: 753031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753186:1
position: 753186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:753524-753643:1:exon

position:753524:1
position: 753524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753643:1
position: 753643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:754027-754179:1:exon

position:754027:1
position: 754027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754179:1
position: 754179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:754694-756067:1:exon

position:754694:1
position: 754694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_015649478.1
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: join(746437..746692,747101..747142,750254..750331,750434..750621,751181..751360,751446..751542,752726..752848,753031..753186,753524..753643,754027..754179,754694..756067)
location: region:746437-756067:1
so has part: feature:746437-746692:1:exon
so has part: feature:747101-747142:1:exon
so has part: feature:750254-750331:1:exon
so has part: feature:750434-750621:1:exon
so has part: feature:751181-751360:1:exon
so has part: feature:751446-751542:1:exon
so has part: feature:752726-752848:1:exon
so has part: feature:753031-753186:1:exon
so has part: feature:753524-753643:1:exon
so has part: feature:754027-754179:1:exon
so has part: feature:754694-756067:1:exon

position:746437:1
position: 746437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746437-746692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747101-747142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750254-750331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750434-750621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:751181-751360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:751446-751542:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:752726-752848:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753031-753186:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:753524-753643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754027-754179:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754694-756067:1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X1
translation: MAVRAAGSLRATSAVPQSHFLFLQVPPKHVKLGLGKLGLSSLQLPALKKLKWNMVFEDSKMPGKRSVKNPVPEEESPELKKVKVSHPSHRSQPGLVLTLGQGNVGQLGLGEDIMERKKPTLVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSETSPGPVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSIPLLLQLDAPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFANRGGRKGLQRLLVPQLVHVRGKGRRGKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTCFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPRITSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: join(746563..746692,747101..747142,750254..750331,750434..750621,751181..751360,751446..751542,752726..752848,753031..753186,753524..753643,754027..754179,754694..754869)
location: region:746563-754869:1
so has part: feature:746563-746692:1:exon
so has part: feature:747101-747142:1:exon
so has part: feature:750254-750331:1:exon
so has part: feature:750434-750621:1:exon
so has part: feature:751181-751360:1:exon
so has part: feature:751446-751542:1:exon
so has part: feature:752726-752848:1:exon
so has part: feature:753031-753186:1:exon
so has part: feature:753524-753643:1:exon
so has part: feature:754027-754179:1:exon
so has part: feature:754694-754869:1:exon

XP_015504964.1
type: Protein
SIO_000068: ncbiprotein

position:746563:1
position: 746563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754869:1
position: 754869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746563-746692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:747101-747142:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750254-750331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:750434-750621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:751181-751360:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:751446-751542:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:752726-752848:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753031-753186:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:753524-753643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754027-754179:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:754694-754869:1:exon

LOC117245470
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117245470
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 746793..746997
location: region:746793-746997:1
so has part: feature:746793-746997:1:exon
subclass of: SO_0000578

117245470
type: Gene
SIO_000068: ncbigene

position:746793:1
position: 746793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746997:1
position: 746997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746793-746997:1:exon

LOC117245470
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: snoRNA
gene: LOC117245470
product: small nucleolar RNA SNORA73 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00045
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004500189.1
SIO_010081: LOC117245470
subclass of: SO_0000673
so part of: LOC117245470
location: 746793..746997
location: region:746793-746997:1
so has part: feature:746793-746997:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:746793-746997:1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X3
translation: MVFEDSKMPGKRSVKNPVPEEESPELKKVKVSHPSHRSQPGLVLTLGQGNVGQLGLGEDIMERKKPTLVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSETSPGPVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSIPLLLQLDAPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFANRGGRKGLQRLLVPQLVHVRGKGRRGKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTCFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPRITSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: join(747130..747142,750254..750331,750434..750621,751181..751360,751446..751542,752726..752848,753031..753186,753524..753643,754027..754179,754694..754869)
location: region:747130-754869:1
so has part: feature:747130-747142:1:exon
so has part: feature:750254-750331:1:exon
so has part: feature:750434-750621:1:exon
so has part: feature:751181-751360:1:exon
so has part: feature:751446-751542:1:exon
so has part: feature:752726-752848:1:exon
so has part: feature:753031-753186:1:exon
so has part: feature:753524-753643:1:exon
so has part: feature:754027-754179:1:exon
so has part: feature:754694-754869:1:exon

XP_015504967.1
type: Protein
SIO_000068: ncbiprotein

position:747130:1
position: 747130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747130-747142:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750254-750331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750434-750621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751181-751360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:751446-751542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752726-752848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753031-753186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753524-753643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754027-754179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754694-754869:1:exon

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015649483.3
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: join(749614..749634,750254..750331,750434..750621,751181..751360,751446..751542,752726..752848,753031..753186,753524..753643,754027..754179,754694..756067)
location: region:749614-756067:1
so has part: feature:749614-749634:1:exon
so has part: feature:750254-750331:1:exon
so has part: feature:750434-750621:1:exon
so has part: feature:751181-751360:1:exon
so has part: feature:751446-751542:1:exon
so has part: feature:752726-752848:1:exon
so has part: feature:753031-753186:1:exon
so has part: feature:753524-753643:1:exon
so has part: feature:754027-754179:1:exon
so has part: feature:754694-756067:1:exon

position:749614:1
position: 749614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749614-749634:1:exon

position:749634:1
position: 749634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:750254-750331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750434-750621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751181-751360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:751446-751542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752726-752848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753031-753186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753524-753643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754027-754179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754694-756067:1:exon

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015649480.2
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: join(749671..749829,750254..750331,750434..750621,751181..751360,751446..751542,752726..752848,753031..753186,753524..753643,754027..754179,754694..756067)
location: region:749671-756067:1
so has part: feature:749671-749829:1:exon
so has part: feature:750254-750331:1:exon
so has part: feature:750434-750621:1:exon
so has part: feature:751181-751360:1:exon
so has part: feature:751446-751542:1:exon
so has part: feature:752726-752848:1:exon
so has part: feature:753031-753186:1:exon
so has part: feature:753524-753643:1:exon
so has part: feature:754027-754179:1:exon
so has part: feature:754694-756067:1:exon

position:749671:1
position: 749671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749671-749829:1:exon

position:749829:1
position: 749829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:750254-750331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750434-750621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751181-751360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:751446-751542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752726-752848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753031-753186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753524-753643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754027-754179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754694-756067:1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X2
translation: MGTRMRTRARGSRRAPGRPRRSRPAGMESCRRREERLVRAPACAGSHSKMPGKRSVKNPVPEEESPELKKVKVSHPSHRSQPGLVLTLGQGNVGQLGLGEDIMERKKPTLVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSETSPGPVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSIPLLLQLDAPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFANRGGRKGLQRLLVPQLVHVRGKGRRGKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTCFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPRITSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: join(749691..749829,750254..750331,750434..750621,751181..751360,751446..751542,752726..752848,753031..753186,753524..753643,754027..754179,754694..754869)
location: region:749691-754869:1
so has part: feature:749691-749829:1:exon
so has part: feature:750254-750331:1:exon
so has part: feature:750434-750621:1:exon
so has part: feature:751181-751360:1:exon
so has part: feature:751446-751542:1:exon
so has part: feature:752726-752848:1:exon
so has part: feature:753031-753186:1:exon
so has part: feature:753524-753643:1:exon
so has part: feature:754027-754179:1:exon
so has part: feature:754694-754869:1:exon

XP_015504966.1
type: Protein
SIO_000068: ncbiprotein

position:749691:1
position: 749691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749691-749829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750254-750331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750434-750621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751181-751360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:751446-751542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752726-752848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753031-753186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753524-753643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754027-754179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754694-754869:1:exon

RCC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RCC1
product: regulator of chromosome condensation 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015649482.3
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: join(749895..750041,750254..750331,750434..750621,751181..751360,751446..751542,752726..752848,753031..753186,753524..753643,754027..754179,754694..756067)
location: region:749895-756067:1
so has part: feature:749895-750041:1:exon
so has part: feature:750254-750331:1:exon
so has part: feature:750434-750621:1:exon
so has part: feature:751181-751360:1:exon
so has part: feature:751446-751542:1:exon
so has part: feature:752726-752848:1:exon
so has part: feature:753031-753186:1:exon
so has part: feature:753524-753643:1:exon
so has part: feature:754027-754179:1:exon
so has part: feature:754694-756067:1:exon

position:749895:1
position: 749895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749895-750041:1:exon

position:750041:1
position: 750041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:750254-750331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:750434-750621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751181-751360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:751446-751542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:752726-752848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753031-753186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:753524-753643:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754027-754179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:754694-756067:1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X4
translation: MPGKRSVKNPVPEEESPELKKVKVSHPSHRSQPGLVLTLGQGNVGQLGLGEDIMERKKPTLVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSETSPGPVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSIPLLLQLDAPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFANRGGRKGLQRLLVPQLVHVRGKGRRGKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTCFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPRITSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: join(750262..750331,750434..750621,751181..751360,751446..751542,752726..752848,753031..753186,753524..753643,754027..754179,754694..754869)
location: region:750262-754869:1
so has part: feature:750262-750331:1:exon
so has part: feature:750434-750621:1:exon
so has part: feature:751181-751360:1:exon
so has part: feature:751446-751542:1:exon
so has part: feature:752726-752848:1:exon
so has part: feature:753031-753186:1:exon
so has part: feature:753524-753643:1:exon
so has part: feature:754027-754179:1:exon
so has part: feature:754694-754869:1:exon

XP_015504968.1
type: Protein
SIO_000068: ncbiprotein

position:750262:1
position: 750262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:750262-750331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750434-750621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751181-751360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751446-751542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:752726-752848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:753031-753186:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753524-753643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:754027-754179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754694-754869:1:exon

RCC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RCC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of chromosome condensation isoform X4
translation: MPGKRSVKNPVPEEESPELKKVKVSHPSHRSQPGLVLTLGQGNVGQLGLGEDIMERKKPTLVTLPEMVVQVEAGGMHTVCLSQTGKIYTFGCNDEGALGRDTSAEGSETSPGPVELQEKVVQVSAGDSHTAALTEDGRVFVWGSFRDNNGVIGLLEPMKTSSIPLLLQLDAPVVKIVSGNDHLVMLTVDGDLFTCGCGEQGQLGRVPALFANRGGRKGLQRLLVPQLVHVRGKGRRGKMRFQDAFCGAYFTFAVTREGHIYGFGLSNYHQLGTQDTEPCFSPQNLTCFKNSTKSWVGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGTGAEEKSTPTVIPELPRITSVACGASVGYAVSSDGRAFAWGMGTNYQLGTGEEDDVWSPVEMTGKQLENRRVLAVSSGGQHTVLLVSDKEQS
SIO_010081: RCC1
subclass of: SO_0000673
so part of: RCC1
location: join(750262..750331,750434..750621,751181..751360,751446..751542,752726..752848,753031..753186,753524..753643,754027..754179,754694..754869)
location: region:750262-754869:1
so has part: feature:750262-750331:1:exon
so has part: feature:750434-750621:1:exon
so has part: feature:751181-751360:1:exon
so has part: feature:751446-751542:1:exon
so has part: feature:752726-752848:1:exon
so has part: feature:753031-753186:1:exon
so has part: feature:753524-753643:1:exon
so has part: feature:754027-754179:1:exon
so has part: feature:754694-754869:1:exon

XP_015504969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:750262-750331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:750434-750621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751181-751360:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:751446-751542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:752726-752848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:753031-753186:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:753524-753643:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:754027-754179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:754694-754869:1:exon

OPRD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: OPRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(759648..771420)
location: region:759648-771420:-1
so has part: feature:759648-771420:-1:exon
subclass of: SO_0000010

107214008
type: Gene
SIO_000068: ncbigene

position:759648:-1
position: 759648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771420:-1
position: 771420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:759648-771420:-1:exon

OPRD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: OPRD1
product: opioid receptor delta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 56 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015649002.1
SIO_010081: OPRD1
subclass of: SO_0000673
so part of: OPRD1
location: complement(join(759648..763744,764446..764795,771018..771420))
location: region:759648-771420:-1
so has part: feature:771018-771420:-1:exon
so has part: feature:764446-764795:-1:exon
so has part: feature:759648-763744:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:771018-771420:-1:exon

position:771018:-1
position: 771018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:764446-764795:-1:exon

position:764446:-1
position: 764446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764795:-1
position: 764795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:759648-763744:-1:exon

position:763744:-1
position: 763744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OPRD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: OPRD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-type opioid receptor
translation: MELPLDVTMDVPVELPSVLPTATATPWGNGTTWAPLPGHGLNDTGPQRAKNATSILIAIVITALYSVVCVVGLLGNVLVMYGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKVVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKIINVCIWVLSSLIGVPIMVMAVTKSKDGMVLCTLQFPDPPIYWDTVTKICVFIFAFLVPILVITICYGLMILRLKSVRLLSGSKEKDRNLRRITRMVLVVVAAFIICWTPIHIFVIVWTLVDIDKKNPYVVASLHFCIALGYTNSSLNPVLYAFLDENFKRCFREFCLPFRARVDQNSFSRARNTTREHVSTCTPSEACNKPV
SIO_010081: OPRD1
subclass of: SO_0000673
so part of: OPRD1
location: complement(join(763212..763744,764446..764795,771018..771271))
location: region:763212-771271:-1
so has part: feature:771018-771271:-1:exon
so has part: feature:764446-764795:-1:exon
so has part: feature:763212-763744:-1:exon

XP_015504488.1
type: Protein
SIO_000068: ncbiprotein

position:763212:-1
position: 763212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771271:-1
position: 771271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771018-771271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:764446-764795:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763212-763744:-1:exon

TCEA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TCEA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(787571..794248)
location: region:787571-794248:-1
so has part: feature:787571-794248:-1:exon
subclass of: SO_0000010

107214277
type: Gene
SIO_000068: ncbigene

position:787571:-1
position: 787571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794248:-1
position: 794248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:787571-794248:-1:exon

TCEA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TCEA3
product: transcription elongation factor A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015649521.3
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: complement(join(787571..788223,788331..788402,788483..788629,789031..789185,790086..790142,790438..790592,790692..790769,791037..791111,791237..791305,791491..791559,791816..791969,792277..792382,792485..792575,794052..794248))
location: region:787571-794248:-1
so has part: feature:794052-794248:-1:exon
so has part: feature:792485-792575:-1:exon
so has part: feature:792277-792382:-1:exon
so has part: feature:791816-791969:-1:exon
so has part: feature:791491-791559:-1:exon
so has part: feature:791237-791305:-1:exon
so has part: feature:791037-791111:-1:exon
so has part: feature:790692-790769:-1:exon
so has part: feature:790438-790592:-1:exon
so has part: feature:790086-790142:-1:exon
so has part: feature:789031-789185:-1:exon
so has part: feature:788483-788629:-1:exon
so has part: feature:788331-788402:-1:exon
so has part: feature:787571-788223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:794052-794248:-1:exon

position:794052:-1
position: 794052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:792485-792575:-1:exon

position:792485:-1
position: 792485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792575:-1
position: 792575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792277-792382:-1:exon

position:792277:-1
position: 792277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792382:-1
position: 792382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:791816-791969:-1:exon

position:791816:-1
position: 791816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791969:-1
position: 791969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:791491-791559:-1:exon

position:791491:-1
position: 791491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791559:-1
position: 791559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:791237-791305:-1:exon

position:791237:-1
position: 791237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791305:-1
position: 791305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:791037-791111:-1:exon

position:791037:-1
position: 791037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791111:-1
position: 791111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:790692-790769:-1:exon

position:790692:-1
position: 790692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790769:-1
position: 790769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:790438-790592:-1:exon

position:790438:-1
position: 790438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790592:-1
position: 790592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:790086-790142:-1:exon

position:790086:-1
position: 790086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790142:-1
position: 790142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:789031-789185:-1:exon

position:789031:-1
position: 789031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789185:-1
position: 789185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:788483-788629:-1:exon

position:788483:-1
position: 788483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788629:-1
position: 788629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:788331-788402:-1:exon

position:788331:-1
position: 788331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788402:-1
position: 788402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:787571-788223:-1:exon

position:788223:-1
position: 788223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCEA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TCEA3
product: transcription elongation factor A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_015649522.3
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: complement(join(787571..788223,788331..788402,788483..788629,789031..789185,790086..790142,790438..790592,790692..790769,791037..791111,791237..791305,791491..791559,791816..791969,792277..792382,792485..792547,794052..794245))
location: region:787571-794245:-1
so has part: feature:794052-794245:-1:exon
so has part: feature:792485-792547:-1:exon
so has part: feature:792277-792382:-1:exon
so has part: feature:791816-791969:-1:exon
so has part: feature:791491-791559:-1:exon
so has part: feature:791237-791305:-1:exon
so has part: feature:791037-791111:-1:exon
so has part: feature:790692-790769:-1:exon
so has part: feature:790438-790592:-1:exon
so has part: feature:790086-790142:-1:exon
so has part: feature:789031-789185:-1:exon
so has part: feature:788483-788629:-1:exon
so has part: feature:788331-788402:-1:exon
so has part: feature:787571-788223:-1:exon

position:794245:-1
position: 794245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794052-794245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792485-792547:-1:exon

position:792547:-1
position: 792547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792277-792382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:791816-791969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:791491-791559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:791237-791305:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:791037-791111:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:790692-790769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:790438-790592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790086-790142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789031-789185:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:788483-788629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:788331-788402:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:787571-788223:-1:exon

TCEA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TCEA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 3 isoform X1
translation: MSAVPSCARSQRPAPLEPPPWGPLRSWSALPRNWIRWWPGRARGSHGFSLLQEGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLLESTTTKKEKDADGKKEKDTDGDKEKKKGLDVSRCPSEGVKHSKNTAEKHKERKSSKCDSHATTTQGHSANSSPERESSDGWSPTASSKKSLLDGKKERRASADSRSSTISSSSSPQKRLSGERRASVGISLSPAPTNSQRNSSDSQEERANSSKAKSEVPRTPTSPSFSPSPCFLAPCYLTGDSVRDKCIEMLTAALRMDDDYKEFSVNCEKMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPGLRRNVLCGAIEPGLIARMTAEEMASDELKKLRNAMTQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: complement(join(788215..788223,788331..788402,788483..788629,789031..789185,790086..790142,790438..790592,790692..790769,791037..791111,791237..791305,791491..791559,791816..791969,792277..792382,792485..792575,794052..794179))
location: region:788215-794179:-1
so has part: feature:794052-794179:-1:exon
so has part: feature:792485-792575:-1:exon
so has part: feature:792277-792382:-1:exon
so has part: feature:791816-791969:-1:exon
so has part: feature:791491-791559:-1:exon
so has part: feature:791237-791305:-1:exon
so has part: feature:791037-791111:-1:exon
so has part: feature:790692-790769:-1:exon
so has part: feature:790438-790592:-1:exon
so has part: feature:790086-790142:-1:exon
so has part: feature:789031-789185:-1:exon
so has part: feature:788483-788629:-1:exon
so has part: feature:788331-788402:-1:exon
so has part: feature:788215-788223:-1:exon

XP_015505007.1
type: Protein
SIO_000068: ncbiprotein

position:788215:-1
position: 788215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794179:-1
position: 794179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794052-794179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792485-792575:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:792277-792382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:791816-791969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:791491-791559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:791237-791305:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:791037-791111:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:790692-790769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:790438-790592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790086-790142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789031-789185:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:788483-788629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:788331-788402:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:788215-788223:-1:exon

TCEA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TCEA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 3 isoform X2
translation: MGPTEELVRIAKKLDKMVARKSTEGALDLLKSLTGYTMTIQLLQTTRIGVAVNSVRKHCSDEEVVASAKILIKNWKRLLESTTTKKEKDADGKKEKDTDGDKEKKKGLDVSRCPSEGVKHSKNTAEKHKERKSSKCDSHATTTQGHSANSSPERESSDGWSPTASSKKSLLDGKKERRASADSRSSTISSSSSPQKRLSGERRASVGISLSPAPTNSQRNSSDSQEERANSSKAKSEVPRTPTSPSFSPSPCFLAPCYLTGDSVRDKCIEMLTAALRMDDDYKEFSVNCEKMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPGLRRNVLCGAIEPGLIARMTAEEMASDELKKLRNAMTQEAIREHQMAKTGGTVTDLFQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
SIO_010081: TCEA3
subclass of: SO_0000673
so part of: TCEA3
location: complement(join(788215..788223,788331..788402,788483..788629,789031..789185,790086..790142,790438..790592,790692..790769,791037..791111,791237..791305,791491..791559,791816..791969,792277..792382,792485..792547,794052..794120))
location: region:788215-794120:-1
so has part: feature:794052-794120:-1:exon
so has part: feature:792485-792547:-1:exon
so has part: feature:792277-792382:-1:exon
so has part: feature:791816-791969:-1:exon
so has part: feature:791491-791559:-1:exon
so has part: feature:791237-791305:-1:exon
so has part: feature:791037-791111:-1:exon
so has part: feature:790692-790769:-1:exon
so has part: feature:790438-790592:-1:exon
so has part: feature:790086-790142:-1:exon
so has part: feature:789031-789185:-1:exon
so has part: feature:788483-788629:-1:exon
so has part: feature:788331-788402:-1:exon
so has part: feature:788215-788223:-1:exon

XP_015505008.1
type: Protein
SIO_000068: ncbiprotein

position:794120:-1
position: 794120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794052-794120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792485-792547:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:792277-792382:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:791816-791969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:791491-791559:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:791237-791305:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:791037-791111:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:790692-790769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:790438-790592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790086-790142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789031-789185:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:788483-788629:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:788331-788402:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:788215-788223:-1:exon

ASAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ASAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(795214..813039)
location: region:795214-813039:-1
so has part: feature:795214-813039:-1:exon
subclass of: SO_0000010

107214253
type: Gene
SIO_000068: ncbigene

position:795214:-1
position: 795214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:813039:-1
position: 813039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795214-813039:-1:exon

ASAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ASAP3
product: ArfGAP with SH3 domain, ankyrin repeat and PH domain 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_015649467.3
SIO_010081: ASAP3
subclass of: SO_0000673
so part of: ASAP3
location: complement(join(795214..796173,796451..796573,796725..796869,797359..797632,797720..797963,798081..798188,798361..798428,798518..798633,798745..798830,799162..799342,799610..799704,800093..800226,800341..800528,800617..800665,801191..801278,801834..801903,802136..802245,802514..802600,802727..802802,803581..803666,805689..805815,806185..806234,806519..806593,808092..808237,808812..808884,812780..813039))
location: region:795214-813039:-1
so has part: feature:812780-813039:-1:exon
so has part: feature:808812-808884:-1:exon
so has part: feature:808092-808237:-1:exon
so has part: feature:806519-806593:-1:exon
so has part: feature:806185-806234:-1:exon
so has part: feature:805689-805815:-1:exon
so has part: feature:803581-803666:-1:exon
so has part: feature:802727-802802:-1:exon
so has part: feature:802514-802600:-1:exon
so has part: feature:802136-802245:-1:exon
so has part: feature:801834-801903:-1:exon
so has part: feature:801191-801278:-1:exon
so has part: feature:800617-800665:-1:exon
so has part: feature:800341-800528:-1:exon
so has part: feature:800093-800226:-1:exon
so has part: feature:799610-799704:-1:exon
so has part: feature:799162-799342:-1:exon
so has part: feature:798745-798830:-1:exon
so has part: feature:798518-798633:-1:exon
so has part: feature:798361-798428:-1:exon
so has part: feature:798081-798188:-1:exon
so has part: feature:797720-797963:-1:exon
so has part: feature:797359-797632:-1:exon
so has part: feature:796725-796869:-1:exon
so has part: feature:796451-796573:-1:exon
so has part: feature:795214-796173:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:812780-813039:-1:exon

position:812780:-1
position: 812780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808812-808884:-1:exon

position:808812:-1
position: 808812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808884:-1
position: 808884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:808092-808237:-1:exon

position:808092:-1
position: 808092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808237:-1
position: 808237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:806519-806593:-1:exon

position:806519:-1
position: 806519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806593:-1
position: 806593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:806185-806234:-1:exon

position:806185:-1
position: 806185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806234:-1
position: 806234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:805689-805815:-1:exon

position:805689:-1
position: 805689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805815:-1
position: 805815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:803581-803666:-1:exon

position:803581:-1
position: 803581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803666:-1
position: 803666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:802727-802802:-1:exon

position:802727:-1
position: 802727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802802:-1
position: 802802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:802514-802600:-1:exon

position:802514:-1
position: 802514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802600:-1
position: 802600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:802136-802245:-1:exon

position:802136:-1
position: 802136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802245:-1
position: 802245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:801834-801903:-1:exon

position:801834:-1
position: 801834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801903:-1
position: 801903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:801191-801278:-1:exon

position:801191:-1
position: 801191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801278:-1
position: 801278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:800617-800665:-1:exon

position:800617:-1
position: 800617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800665:-1
position: 800665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:800341-800528:-1:exon

position:800341:-1
position: 800341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800528:-1
position: 800528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:800093-800226:-1:exon

position:800093:-1
position: 800093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800226:-1
position: 800226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:799610-799704:-1:exon

position:799610:-1
position: 799610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799704:-1
position: 799704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:799162-799342:-1:exon

position:799162:-1
position: 799162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799342:-1
position: 799342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:798745-798830:-1:exon

position:798745:-1
position: 798745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798830:-1
position: 798830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:798518-798633:-1:exon

position:798518:-1
position: 798518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798633:-1
position: 798633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:798361-798428:-1:exon

position:798361:-1
position: 798361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798428:-1
position: 798428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:798081-798188:-1:exon

position:798081:-1
position: 798081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798188:-1
position: 798188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:797720-797963:-1:exon

position:797720:-1
position: 797720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797963:-1
position: 797963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:797359-797632:-1:exon

position:797359:-1
position: 797359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797632:-1
position: 797632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:796725-796869:-1:exon

position:796725:-1
position: 796725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796869:-1
position: 796869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:796451-796573:-1:exon

position:796451:-1
position: 796451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796573:-1
position: 796573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:795214-796173:-1:exon

position:796173:-1
position: 796173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ASAP3
product: ArfGAP with SH3 domain, ankyrin repeat and PH domain 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015649468.3
SIO_010081: ASAP3
subclass of: SO_0000673
so part of: ASAP3
location: complement(join(795652..796173,796451..796573,796725..796869,797359..797632,797720..797963,798081..798188,798361..798428,798518..798633,798745..798830,799162..799342,799610..799704,800093..800226,800341..800528,800617..800665,801191..801278,801834..801903,802136..802245,802514..802600,802727..802802,803581..803666,806519..806593,808092..808237,808812..808884,812780..813039))
location: region:795652-813039:-1
so has part: feature:812780-813039:-1:exon
so has part: feature:808812-808884:-1:exon
so has part: feature:808092-808237:-1:exon
so has part: feature:806519-806593:-1:exon
so has part: feature:803581-803666:-1:exon
so has part: feature:802727-802802:-1:exon
so has part: feature:802514-802600:-1:exon
so has part: feature:802136-802245:-1:exon
so has part: feature:801834-801903:-1:exon
so has part: feature:801191-801278:-1:exon
so has part: feature:800617-800665:-1:exon
so has part: feature:800341-800528:-1:exon
so has part: feature:800093-800226:-1:exon
so has part: feature:799610-799704:-1:exon
so has part: feature:799162-799342:-1:exon
so has part: feature:798745-798830:-1:exon
so has part: feature:798518-798633:-1:exon
so has part: feature:798361-798428:-1:exon
so has part: feature:798081-798188:-1:exon
so has part: feature:797720-797963:-1:exon
so has part: feature:797359-797632:-1:exon
so has part: feature:796725-796869:-1:exon
so has part: feature:796451-796573:-1:exon
so has part: feature:795652-796173:-1:exon

position:795652:-1
position: 795652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812780-813039:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808812-808884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808092-808237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806519-806593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803581-803666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802727-802802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:802514-802600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:802136-802245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:801834-801903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:801191-801278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:800617-800665:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:800341-800528:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:800093-800226:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:799610-799704:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:799162-799342:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:798745-798830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:798518-798633:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:798361-798428:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:798081-798188:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:797720-797963:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:797359-797632:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796725-796869:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796451-796573:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795652-796173:-1:exon

ASAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ASAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X2
translation: MPEQLSVADFLAVTNEDLSSSAAAFASKMQKCRGAVGALEESLDGDQAVLQRIRKYVKAIHISGLTHVENEEQYSEALENFGNNHLSQNNHELSTGFLNLAVFTREVTALFKNLVQNLNNIVSFPLDSLLKGQLKDSRLYLLKANESQMKQGPDFLQSLIKFFHAQHNFFQDGWKAAQNLYPFIEKLAVSLHALRQAQEEEVKQLTQTRDSLRSVLQLENKEENLSRKNSGSGYSIHQHQGNKQYGTEKSGFLYKKSDGIRKVWQKRKCGVKYGCLTISHSTINRPPVKLNLLTCQVRPHAEEKKCFDLVTHNRTYHFQAEDEQECVVWVSVLQNSKDEALSNAFKGDGGSGGMVAGIGLDSSMQELTRLVISEVKNMPGNKQCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRIQSLTLDVLSTSELLLAVSIGNTRFNEIMEAMLPTQNCPKPSASSDMAARKEYIMAKYMERRYVQKSGQDNPHGLWEAIQARDLLALLKAFAEGHDLTKPLASPEGQDAGELPLHMAVRHADRSSLPLVDFIIQNGGTLDRVTQDGNTALHYGALYNQPNCLKLLLKGKATFTTVNAVGETALDVARRLKYSECEELLEQAQAGKLSLQIHVDYDWEPPSEFPYDSEDELEEKVSPLQRSFKGTSPLAASLLPTCPQTRWSCTGMDITNKTYESILVPSRPAPCRAHSEEIPPPLPLKNPTRGSSHPKPSHSPTERPELPRQASEPQFSRPAEALAPHSLPCASSTGALDGTPSTRSPTESQRAAYWETRSEMDTSASRRGPERSPPPAQPLPGSTVPDIPPVKFSSESTRSYRRISGMVGKMGSAGSLQSPGGPEDPALSKVPPVPMPRRFAPAKGRQKRVKAVADCKGDKARELTFSKGEVIVVTREEDEQIWVGFIEGDGTRTGVFPASFVHLLQD
SIO_010081: ASAP3
subclass of: SO_0000673
so part of: ASAP3
location: complement(join(796099..796173,796451..796573,796725..796869,797359..797632,797720..797963,798081..798188,798361..798428,798518..798633,798745..798830,799162..799342,799610..799704,800093..800226,800341..800528,800617..800665,801191..801278,801834..801903,802136..802245,802514..802600,802727..802802,803581..803666,806519..806593,808092..808237,808812..808884,812780..812902))
location: region:796099-812902:-1
so has part: feature:812780-812902:-1:exon
so has part: feature:808812-808884:-1:exon
so has part: feature:808092-808237:-1:exon
so has part: feature:806519-806593:-1:exon
so has part: feature:803581-803666:-1:exon
so has part: feature:802727-802802:-1:exon
so has part: feature:802514-802600:-1:exon
so has part: feature:802136-802245:-1:exon
so has part: feature:801834-801903:-1:exon
so has part: feature:801191-801278:-1:exon
so has part: feature:800617-800665:-1:exon
so has part: feature:800341-800528:-1:exon
so has part: feature:800093-800226:-1:exon
so has part: feature:799610-799704:-1:exon
so has part: feature:799162-799342:-1:exon
so has part: feature:798745-798830:-1:exon
so has part: feature:798518-798633:-1:exon
so has part: feature:798361-798428:-1:exon
so has part: feature:798081-798188:-1:exon
so has part: feature:797720-797963:-1:exon
so has part: feature:797359-797632:-1:exon
so has part: feature:796725-796869:-1:exon
so has part: feature:796451-796573:-1:exon
so has part: feature:796099-796173:-1:exon

XP_015504954.1
type: Protein
SIO_000068: ncbiprotein

position:796099:-1
position: 796099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812902:-1
position: 812902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812780-812902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808812-808884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808092-808237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806519-806593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:803581-803666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:802727-802802:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:802514-802600:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:802136-802245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:801834-801903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:801191-801278:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:800617-800665:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:800341-800528:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:800093-800226:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:799610-799704:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:799162-799342:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:798745-798830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:798518-798633:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:798361-798428:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:798081-798188:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:797720-797963:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:797359-797632:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:796725-796869:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:796451-796573:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:796099-796173:-1:exon

ASAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ASAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X1
translation: MPEQLSVADFLAVTNEDLSSSAAAFASKMQKCRGAVGALEESLDGDQAVLQRIRKYVKAIHISGLTHVENEEQYSEALENFGNNHLSQNNHELSTGFLNLAVFTREVTALFKNLVQNLNNIVSFPLDSLLKGQLKDSRLDSKKQIEKAWKDYETKVGKMEKEKERARLAGVIQAEPAAAEMAEDMQKERRLLQLHMCEYLLKANESQMKQGPDFLQSLIKFFHAQHNFFQDGWKAAQNLYPFIEKLAVSLHALRQAQEEEVKQLTQTRDSLRSVLQLENKEENLSRKNSGSGYSIHQHQGNKQYGTEKSGFLYKKSDGIRKVWQKRKCGVKYGCLTISHSTINRPPVKLNLLTCQVRPHAEEKKCFDLVTHNRTYHFQAEDEQECVVWVSVLQNSKDEALSNAFKGDGGSGGMVAGIGLDSSMQELTRLVISEVKNMPGNKQCCDCGAPDPTWLSTNLGILTCIECSGIHRELGVHYSRIQSLTLDVLSTSELLLAVSIGNTRFNEIMEAMLPTQNCPKPSASSDMAARKEYIMAKYMERRYVQKSGQDNPHGLWEAIQARDLLALLKAFAEGHDLTKPLASPEGQDAGELPLHMAVRHADRSSLPLVDFIIQNGGTLDRVTQDGNTALHYGALYNQPNCLKLLLKGKATFTTVNAVGETALDVARRLKYSECEELLEQAQAGKLSLQIHVDYDWEPPSEFPYDSEDELEEKVSPLQRSFKGTSPLAASLLPTCPQTRWSCTGMDITNKTYESILVPSRPAPCRAHSEEIPPPLPLKNPTRGSSHPKPSHSPTERPELPRQASEPQFSRPAEALAPHSLPCASSTGALDGTPSTRSPTESQRAAYWETRSEMDTSASRRGPERSPPPAQPLPGSTVPDIPPVKFSSESTRSYRRISGMVGKMGSAGSLQSPGGPEDPALSKVPPVPMPRRFAPAKGRQKRVKAVADCKGDKARELTFSKGEVIVVTREEDEQIWVGFIEGDGTRTGVFPASFVHLLQD
SIO_010081: ASAP3
subclass of: SO_0000673
so part of: ASAP3
location: complement(join(796099..796173,796451..796573,796725..796869,797359..797632,797720..797963,798081..798188,798361..798428,798518..798633,798745..798830,799162..799342,799610..799704,800093..800226,800341..800528,800617..800665,801191..801278,801834..801903,802136..802245,802514..802600,802727..802802,803581..803666,805689..805815,806185..806234,806519..806593,808092..808237,808812..808884,812780..812902))
location: region:796099-812902:-1
so has part: feature:812780-812902:-1:exon
so has part: feature:808812-808884:-1:exon
so has part: feature:808092-808237:-1:exon
so has part: feature:806519-806593:-1:exon
so has part: feature:806185-806234:-1:exon
so has part: feature:805689-805815:-1:exon
so has part: feature:803581-803666:-1:exon
so has part: feature:802727-802802:-1:exon
so has part: feature:802514-802600:-1:exon
so has part: feature:802136-802245:-1:exon
so has part: feature:801834-801903:-1:exon
so has part: feature:801191-801278:-1:exon
so has part: feature:800617-800665:-1:exon
so has part: feature:800341-800528:-1:exon
so has part: feature:800093-800226:-1:exon
so has part: feature:799610-799704:-1:exon
so has part: feature:799162-799342:-1:exon
so has part: feature:798745-798830:-1:exon
so has part: feature:798518-798633:-1:exon
so has part: feature:798361-798428:-1:exon
so has part: feature:798081-798188:-1:exon
so has part: feature:797720-797963:-1:exon
so has part: feature:797359-797632:-1:exon
so has part: feature:796725-796869:-1:exon
so has part: feature:796451-796573:-1:exon
so has part: feature:796099-796173:-1:exon

XP_015504953.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:812780-812902:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808812-808884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808092-808237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:806519-806593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806185-806234:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:805689-805815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:803581-803666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:802727-802802:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:802514-802600:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:802136-802245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:801834-801903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:801191-801278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:800617-800665:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:800341-800528:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:800093-800226:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:799610-799704:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:799162-799342:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:798745-798830:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:798518-798633:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:798361-798428:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798081-798188:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:797720-797963:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:797359-797632:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:796725-796869:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:796451-796573:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:796099-796173:-1:exon

E2F2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: E2F2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(815166..823808)
location: region:815166-823808:-1
so has part: feature:815166-823808:-1:exon
subclass of: SO_0000010

107214004
type: Gene
SIO_000068: ncbigene

position:815166:-1
position: 815166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823808:-1
position: 823808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:815166-823808:-1:exon

E2F2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: E2F2
product: E2F transcription factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_015648991.2
SIO_010081: E2F2
subclass of: SO_0000673
so part of: E2F2
location: complement(join(815166..816674,816913..817027,817193..817351,817471..817690,818051..818138,823198..823808))
location: region:815166-823808:-1
so has part: feature:823198-823808:-1:exon
so has part: feature:818051-818138:-1:exon
so has part: feature:817471-817690:-1:exon
so has part: feature:817193-817351:-1:exon
so has part: feature:816913-817027:-1:exon
so has part: feature:815166-816674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823198-823808:-1:exon

position:823198:-1
position: 823198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:818051-818138:-1:exon

position:818051:-1
position: 818051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818138:-1
position: 818138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:817471-817690:-1:exon

position:817471:-1
position: 817471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817690:-1
position: 817690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:817193-817351:-1:exon

position:817193:-1
position: 817193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817351:-1
position: 817351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:816913-817027:-1:exon

position:816913:-1
position: 816913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817027:-1
position: 817027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:815166-816674:-1:exon

position:816674:-1
position: 816674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

E2F2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: E2F2
product: E2F transcription factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015648990.2
SIO_010081: E2F2
subclass of: SO_0000673
so part of: E2F2
location: complement(join(815166..816674,816913..817027,817193..817351,817471..817714,818051..818138,823198..823808))
location: region:815166-823808:-1
so has part: feature:823198-823808:-1:exon
so has part: feature:818051-818138:-1:exon
so has part: feature:817471-817714:-1:exon
so has part: feature:817193-817351:-1:exon
so has part: feature:816913-817027:-1:exon
so has part: feature:815166-816674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823198-823808:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:818051-818138:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:817471-817714:-1:exon

position:817714:-1
position: 817714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:817193-817351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:816913-817027:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:815166-816674:-1:exon

E2F2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: E2F2
product: E2F transcription factor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015648992.1
SIO_010081: E2F2
subclass of: SO_0000673
so part of: E2F2
location: complement(join(815166..816674,816913..817027,817193..817351,817471..817690,818037..818126))
location: region:815166-818126:-1
so has part: feature:818037-818126:-1:exon
so has part: feature:817471-817690:-1:exon
so has part: feature:817193-817351:-1:exon
so has part: feature:816913-817027:-1:exon
so has part: feature:815166-816674:-1:exon

position:818126:-1
position: 818126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818037-818126:-1:exon