Parus major isolate Abel chromosome 17, Parus_major1.1, whole genome shotgun sequence.
type: Entry
definition: Parus major isolate Abel chromosome 17, Parus_major1.1, whole genome shotgun sequence.
sequence version: NC_031785.1
sequence date: 2020-04-17
sequence: sequence
division: CON
label: NC_031785.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA312399
dblink: SAMN03083587
keyword: WGS
keyword: RefSeq
source: Parus major (Great Tit)
organism: Parus major
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus.
reference: 1
references: 26805030
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003726.1.\nOn Nov 14, 2016 this sequence version replaced NC_029285.1.\nAssembly name: Parus_major1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Animal Breeding and Genomics\nCentre, Wageningen University on 2016/06/30. The original\nwhole-genome shotgun project has the accession JRXK00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Animal Breeding and Genomics Centre,\n Wageningen University\nAssembly Date :: MAY-2013\nAssembly Method :: AllPaths v. April-2013\nAssembly Name :: Parus_major1.0.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 95.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Parus major Annotation Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 10486032
topology: linear
so has quality: SO_0000987
location: 1..10486032
location: region:1-10486032:1
RO_0002162: 9157

NC_031785
type: RefSeq
SIO_000068: refseq

PRJNA312399
type: BioProject
SIO_000068: bioproject

SAMN03083587
type: BioSample
SIO_000068: biosample

1
title: Evolutionary signals of selection on cognition from the great tit genome and methylome
author: Laine, V.N.
author: Gossmann, T.I.
author: Schachtschneider, K.M.
author: Garroway, C.J.
author: Madsen, O.
author: Verhoeven, K.J.
author: de Jager, V.
author: Megens, H.J.
author: Warren, W.C.
author: Minx, P.
author: Crooijmans, R.P.
author: Corcoran, P.
author: Sheldon, B.C.
author: Slate, J.
author: Zeng, K.
author: van Oers, K.
author: Visser, M.E.
author: Groenen, M.A.
journal: Nat Commun 7, 10474 (2016)
pubmed: 26805030

26805030
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10486032:1
position: 10486032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-10486032:1:source
so part of: sequence
organism: Parus major
mol type: genomic DNA
isolate: Abel
chromosome: 17
sex: male
tissue type: blood
dev stage: 4 year old

9157
type: Taxonomy
SIO_000068: taxonomy

LOC107211961
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107211961
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(23163..24409)
location: region:23163-24409:-1
so has part: feature:23163-24409:-1:exon
subclass of: SO_0000011

107211961
type: Gene
SIO_000068: ncbigene

position:23163:-1
position: 23163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24409:-1
position: 24409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23163-24409:-1:exon

LOC107211961
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107211961
product: uncharacterized LOC107211961
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001524347.3
SIO_010081: LOC107211961
subclass of: SO_0000673
so part of: LOC107211961
location: complement(join(23163..23301,23426..23551,23638..23679,23758..24409))
location: region:23163-24409:-1
so has part: feature:23758-24409:-1:exon
so has part: feature:23638-23679:-1:exon
so has part: feature:23426-23551:-1:exon
so has part: feature:23163-23301:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23758-24409:-1:exon

position:23758:-1
position: 23758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23638-23679:-1:exon

position:23638:-1
position: 23638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23679:-1
position: 23679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23426-23551:-1:exon

position:23426:-1
position: 23426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23551:-1
position: 23551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:23163-23301:-1:exon

position:23301:-1
position: 23301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GARNL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: GARNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 27853..70806
location: region:27853-70806:1
so has part: feature:27853-70806:1:exon
subclass of: SO_0000010

107212027
type: Gene
SIO_000068: ncbigene

position:27853:1
position: 27853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70806:1
position: 70806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27853-70806:1:exon

GARNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GARNL3
product: GTPase activating Rap/RanGAP domain like 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015644772.1
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(27853..28027,30223..30292,31638..31712,38842..38941,39364..39482,40164..40228,42658..42721,42969..42995,43385..43460,44048..44146,44681..44784,45925..46033,47379..47424,49811..49917,50743..50864,51523..51627,54575..54649,55576..55687,56427..56525,57442..57558,58239..58411,58714..58872,60736..60802,61422..61529,61951..62069,62295..62430,63463..63672,63968..64079,64797..70806)
location: region:27853-70806:1
so has part: feature:27853-28027:1:exon
so has part: feature:30223-30292:1:exon
so has part: feature:31638-31712:1:exon
so has part: feature:38842-38941:1:exon
so has part: feature:39364-39482:1:exon
so has part: feature:40164-40228:1:exon
so has part: feature:42658-42721:1:exon
so has part: feature:42969-42995:1:exon
so has part: feature:43385-43460:1:exon
so has part: feature:44048-44146:1:exon
so has part: feature:44681-44784:1:exon
so has part: feature:45925-46033:1:exon
so has part: feature:47379-47424:1:exon
so has part: feature:49811-49917:1:exon
so has part: feature:50743-50864:1:exon
so has part: feature:51523-51627:1:exon
so has part: feature:54575-54649:1:exon
so has part: feature:55576-55687:1:exon
so has part: feature:56427-56525:1:exon
so has part: feature:57442-57558:1:exon
so has part: feature:58239-58411:1:exon
so has part: feature:58714-58872:1:exon
so has part: feature:60736-60802:1:exon
so has part: feature:61422-61529:1:exon
so has part: feature:61951-62069:1:exon
so has part: feature:62295-62430:1:exon
so has part: feature:63463-63672:1:exon
so has part: feature:63968-64079:1:exon
so has part: feature:64797-70806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27853-28027:1:exon

position:28027:1
position: 28027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30223-30292:1:exon

position:30223:1
position: 30223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30292:1
position: 30292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:31638-31712:1:exon

position:31638:1
position: 31638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31712:1
position: 31712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38842-38941:1:exon

position:38842:1
position: 38842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38941:1
position: 38941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39364-39482:1:exon

position:39364:1
position: 39364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39482:1
position: 39482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:40164-40228:1:exon

position:40164:1
position: 40164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40228:1
position: 40228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:42658-42721:1:exon

position:42658:1
position: 42658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42721:1
position: 42721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:42969-42995:1:exon

position:42969:1
position: 42969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42995:1
position: 42995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:43385-43460:1:exon

position:43385:1
position: 43385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43460:1
position: 43460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:44048-44146:1:exon

position:44048:1
position: 44048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44146:1
position: 44146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:44681-44784:1:exon

position:44681:1
position: 44681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44784:1
position: 44784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:45925-46033:1:exon

position:45925:1
position: 45925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46033:1
position: 46033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:47379-47424:1:exon

position:47379:1
position: 47379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47424:1
position: 47424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:49811-49917:1:exon

position:49811:1
position: 49811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49917:1
position: 49917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:50743-50864:1:exon

position:50743:1
position: 50743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50864:1
position: 50864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:51523-51627:1:exon

position:51523:1
position: 51523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51627:1
position: 51627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:54575-54649:1:exon

position:54575:1
position: 54575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:54649:1
position: 54649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:55576-55687:1:exon

position:55576:1
position: 55576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:55687:1
position: 55687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:56427-56525:1:exon

position:56427:1
position: 56427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:56525:1
position: 56525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:57442-57558:1:exon

position:57442:1
position: 57442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57558:1
position: 57558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:58239-58411:1:exon

position:58239:1
position: 58239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58411:1
position: 58411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:58714-58872:1:exon

position:58714:1
position: 58714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58872:1
position: 58872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:60736-60802:1:exon

position:60736:1
position: 60736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60802:1
position: 60802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:61422-61529:1:exon

position:61422:1
position: 61422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61529:1
position: 61529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:61951-62069:1:exon

position:61951:1
position: 61951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62069:1
position: 62069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:62295-62430:1:exon

position:62295:1
position: 62295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:62430:1
position: 62430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:63463-63672:1:exon

position:63463:1
position: 63463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:63672:1
position: 63672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:63968-64079:1:exon

position:63968:1
position: 63968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64079:1
position: 64079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:64797-70806:1:exon

position:64797:1
position: 64797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GARNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GARNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X1
translation: MAARMELSSAEGASTRFLGLTQRSVSEDLGCRRGEFSRKHYGSVELLISSDADGAIQRAGRFRVENGSSGENTDYAPGTWHRTDVHLENPEYHTRWYFKYFLGKVHQNYIGTDAEKNPFFLSVVLSDQNNQRIPQYHSILWRKTGTQKICLPYSPTKTLSVKSILSAMSLDKFEKSPREIFHPEIQKDLLVLEEQEGSVNFKFGVLYAKDGQLTDDEMFSNETGSESFQRFLHLLGDTITLKGWSGYRGGLDTKNDTTGTCSIYTVFQGHEIMFHVSTMLPYSRENKQQVERKRHIGNDIVTIIFQEGEESSPAFKPSMIRSHFTHIFALVRYNKQNDSYRLKIFSEESVPLFGPPLPSPPVFTNHQEFRDFVLVKLINGEKATLETPTFSQKRQRTLDMLIRSLYQDMMPDLHKGNNMLNRRSFSDVLPESPKSTRKKEEARQAEFVRLGQALKLKTTVKGDTTANLATTSFCKKEPWESQSFCSNFPHEVVCADSWGQSLLVSTDAGILLIDDGQPSVQVFDKTLQIKQMNVLEALDLLIARTDKGKDSRILVFRLSDVQKDLETKKIIRSKYDCRENKLERTKGCHLYAINTHHGSELRIVVAIRNKLLLVTKKYNSHNTLTSTSLLSSPESPVEEFQYIREICLSDPPVVMTLVDGPTGDSDNMICVAYRHQFDLVNESTGESYRFHHVETNRVTFVAAIDVYEDGEAGLLLCYNYVCQYRKVFPFSGGSRLVQPSAYDFHFSWNQVPYAVVCAFPYVLAFTTDSIEIRLVVNGNLVHTAVVPELQLVASRSDIYFKATAAVSGSSDSSSKEMSSKSSPQTPTAYEKPELPLPSLEGEIPCKNLYKIPLSNLVGRSIERPLKSPLVPKVIATTTSSSITSLPVMQSRSLSRMEIKEIASRTRKELLGLLDEPIPKTESAQKLKTVSRRQSDPKQGAIRSSSSDRIISSSFEGYSERRHLSTSSDPDTLANREESSPPSYPFQLIPLYDEDIIDLK
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(27960..28027,30223..30292,31638..31712,38842..38941,39364..39482,40164..40228,42658..42721,42969..42995,43385..43460,44048..44146,44681..44784,45925..46033,47379..47424,49811..49917,50743..50864,51523..51627,54575..54649,55576..55687,56427..56525,57442..57558,58239..58411,58714..58872,60736..60802,61422..61529,61951..62069,62295..62430,63463..63672,63968..64079,64797..64953)
location: region:27960-64953:1
so has part: feature:27960-28027:1:exon
so has part: feature:30223-30292:1:exon
so has part: feature:31638-31712:1:exon
so has part: feature:38842-38941:1:exon
so has part: feature:39364-39482:1:exon
so has part: feature:40164-40228:1:exon
so has part: feature:42658-42721:1:exon
so has part: feature:42969-42995:1:exon
so has part: feature:43385-43460:1:exon
so has part: feature:44048-44146:1:exon
so has part: feature:44681-44784:1:exon
so has part: feature:45925-46033:1:exon
so has part: feature:47379-47424:1:exon
so has part: feature:49811-49917:1:exon
so has part: feature:50743-50864:1:exon
so has part: feature:51523-51627:1:exon
so has part: feature:54575-54649:1:exon
so has part: feature:55576-55687:1:exon
so has part: feature:56427-56525:1:exon
so has part: feature:57442-57558:1:exon
so has part: feature:58239-58411:1:exon
so has part: feature:58714-58872:1:exon
so has part: feature:60736-60802:1:exon
so has part: feature:61422-61529:1:exon
so has part: feature:61951-62069:1:exon
so has part: feature:62295-62430:1:exon
so has part: feature:63463-63672:1:exon
so has part: feature:63968-64079:1:exon
so has part: feature:64797-64953:1:exon

XP_015500258.1
type: Protein
SIO_000068: ncbiprotein

position:27960:1
position: 27960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64953:1
position: 64953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27960-28027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:30223-30292:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31638-31712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38842-38941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39364-39482:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40164-40228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:42658-42721:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:42969-42995:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:43385-43460:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:44048-44146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:44681-44784:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:45925-46033:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:47379-47424:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:49811-49917:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:50743-50864:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:51523-51627:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:54575-54649:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:55576-55687:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:56427-56525:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:57442-57558:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:58239-58411:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:58714-58872:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:60736-60802:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:61422-61529:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:61951-62069:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:62295-62430:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:63463-63672:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:63968-64079:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:64797-64953:1:exon

LOC107212029
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107212029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(31295..34898)
location: region:31295-34898:-1
so has part: feature:31295-34898:-1:exon
subclass of: SO_0000011

107212029
type: Gene
SIO_000068: ncbigene

position:31295:-1
position: 31295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34898:-1
position: 34898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31295-34898:-1:exon

LOC107212029
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107212029
product: uncharacterized LOC107212029
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004499695.1
SIO_010081: LOC107212029
subclass of: SO_0000673
so part of: LOC107212029
location: complement(join(31295..31530,34098..34247,34880..34898))
location: region:31295-34898:-1
so has part: feature:34880-34898:-1:exon
so has part: feature:34098-34247:-1:exon
so has part: feature:31295-31530:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:34880-34898:-1:exon

position:34880:-1
position: 34880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34098-34247:-1:exon

position:34098:-1
position: 34098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34247:-1
position: 34247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:31295-31530:-1:exon

position:31530:-1
position: 31530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GARNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GARNL3
product: GTPase activating Rap/RanGAP domain like 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015644773.3
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(39533..39825,40164..40228,42658..42721,42969..42995,43385..43460,44048..44146,44681..44784,45925..46033,47379..47424,49811..49917,50743..50864,51523..51627,54575..54649,55576..55687,56427..56525,57442..57558,58239..58411,58714..58872,60736..60802,61422..61529,61951..62069,62295..62430,63463..63672,63968..64079,64797..70806)
location: region:39533-70806:1
so has part: feature:39533-39825:1:exon
so has part: feature:40164-40228:1:exon
so has part: feature:42658-42721:1:exon
so has part: feature:42969-42995:1:exon
so has part: feature:43385-43460:1:exon
so has part: feature:44048-44146:1:exon
so has part: feature:44681-44784:1:exon
so has part: feature:45925-46033:1:exon
so has part: feature:47379-47424:1:exon
so has part: feature:49811-49917:1:exon
so has part: feature:50743-50864:1:exon
so has part: feature:51523-51627:1:exon
so has part: feature:54575-54649:1:exon
so has part: feature:55576-55687:1:exon
so has part: feature:56427-56525:1:exon
so has part: feature:57442-57558:1:exon
so has part: feature:58239-58411:1:exon
so has part: feature:58714-58872:1:exon
so has part: feature:60736-60802:1:exon
so has part: feature:61422-61529:1:exon
so has part: feature:61951-62069:1:exon
so has part: feature:62295-62430:1:exon
so has part: feature:63463-63672:1:exon
so has part: feature:63968-64079:1:exon
so has part: feature:64797-70806:1:exon

position:39533:1
position: 39533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39533-39825:1:exon

position:39825:1
position: 39825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:40164-40228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42658-42721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42969-42995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43385-43460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44048-44146:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44681-44784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45925-46033:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:47379-47424:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49811-49917:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:50743-50864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51523-51627:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54575-54649:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:55576-55687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:56427-56525:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:57442-57558:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:58239-58411:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:58714-58872:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:60736-60802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:61422-61529:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:61951-62069:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:62295-62430:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:63463-63672:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:63968-64079:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64797-70806:1:exon

GARNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GARNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform X2
translation: MISLVNDFILLLGFSCTMGTQKICLPYSPTKTLSVKSILSAMSLDKFEKSPREIFHPEIQKDLLVLEEQEGSVNFKFGVLYAKDGQLTDDEMFSNETGSESFQRFLHLLGDTITLKGWSGYRGGLDTKNDTTGTCSIYTVFQGHEIMFHVSTMLPYSRENKQQVERKRHIGNDIVTIIFQEGEESSPAFKPSMIRSHFTHIFALVRYNKQNDSYRLKIFSEESVPLFGPPLPSPPVFTNHQEFRDFVLVKLINGEKATLETPTFSQKRQRTLDMLIRSLYQDMMPDLHKGNNMLNRRSFSDVLPESPKSTRKKEEARQAEFVRLGQALKLKTTVKGDTTANLATTSFCKKEPWESQSFCSNFPHEVVCADSWGQSLLVSTDAGILLIDDGQPSVQVFDKTLQIKQMNVLEALDLLIARTDKGKDSRILVFRLSDVQKDLETKKIIRSKYDCRENKLERTKGCHLYAINTHHGSELRIVVAIRNKLLLVTKKYNSHNTLTSTSLLSSPESPVEEFQYIREICLSDPPVVMTLVDGPTGDSDNMICVAYRHQFDLVNESTGESYRFHHVETNRVTFVAAIDVYEDGEAGLLLCYNYVCQYRKVFPFSGGSRLVQPSAYDFHFSWNQVPYAVVCAFPYVLAFTTDSIEIRLVVNGNLVHTAVVPELQLVASRSDIYFKATAAVSGSSDSSSKEMSSKSSPQTPTAYEKPELPLPSLEGEIPCKNLYKIPLSNLVGRSIERPLKSPLVPKVIATTTSSSITSLPVMQSRSLSRMEIKEIASRTRKELLGLLDEPIPKTESAQKLKTVSRRQSDPKQGAIRSSSSDRIISSSFEGYSERRHLSTSSDPDTLANREESSPPSYPFQLIPLYDEDIIDLK
SIO_010081: GARNL3
subclass of: SO_0000673
so part of: GARNL3
location: join(39772..39825,40164..40228,42658..42721,42969..42995,43385..43460,44048..44146,44681..44784,45925..46033,47379..47424,49811..49917,50743..50864,51523..51627,54575..54649,55576..55687,56427..56525,57442..57558,58239..58411,58714..58872,60736..60802,61422..61529,61951..62069,62295..62430,63463..63672,63968..64079,64797..64953)
location: region:39772-64953:1
so has part: feature:39772-39825:1:exon
so has part: feature:40164-40228:1:exon
so has part: feature:42658-42721:1:exon
so has part: feature:42969-42995:1:exon
so has part: feature:43385-43460:1:exon
so has part: feature:44048-44146:1:exon
so has part: feature:44681-44784:1:exon
so has part: feature:45925-46033:1:exon
so has part: feature:47379-47424:1:exon
so has part: feature:49811-49917:1:exon
so has part: feature:50743-50864:1:exon
so has part: feature:51523-51627:1:exon
so has part: feature:54575-54649:1:exon
so has part: feature:55576-55687:1:exon
so has part: feature:56427-56525:1:exon
so has part: feature:57442-57558:1:exon
so has part: feature:58239-58411:1:exon
so has part: feature:58714-58872:1:exon
so has part: feature:60736-60802:1:exon
so has part: feature:61422-61529:1:exon
so has part: feature:61951-62069:1:exon
so has part: feature:62295-62430:1:exon
so has part: feature:63463-63672:1:exon
so has part: feature:63968-64079:1:exon
so has part: feature:64797-64953:1:exon

XP_015500259.1
type: Protein
SIO_000068: ncbiprotein

position:39772:1
position: 39772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39772-39825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:40164-40228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42658-42721:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:42969-42995:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:43385-43460:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:44048-44146:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:44681-44784:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:45925-46033:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:47379-47424:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:49811-49917:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:50743-50864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:51523-51627:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:54575-54649:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:55576-55687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:56427-56525:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:57442-57558:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:58239-58411:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:58714-58872:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:60736-60802:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:61422-61529:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:61951-62069:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:62295-62430:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:63463-63672:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:63968-64079:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:64797-64953:1:exon

LOC117245234
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117245234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(71211..72671)
location: region:71211-72671:-1
so has part: feature:71211-72671:-1:exon
subclass of: SO_0000010

117245234
type: Gene
SIO_000068: ncbigene

position:71211:-1
position: 71211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72671:-1
position: 72671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71211-72671:-1:exon

LOC117245234
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC117245234
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033518510.1
SIO_010081: LOC117245234
subclass of: SO_0000673
so part of: LOC117245234
location: complement(join(71211..71756,71990..72384,72507..72671))
location: region:71211-72671:-1
so has part: feature:72507-72671:-1:exon
so has part: feature:71990-72384:-1:exon
so has part: feature:71211-71756:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72507-72671:-1:exon

position:72507:-1
position: 72507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:71990-72384:-1:exon

position:71990:-1
position: 71990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72384:-1
position: 72384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71211-71756:-1:exon

position:71756:-1
position: 71756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117245234
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC117245234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MQPAPSAPPARSQYTSTRKKHSEDRRLSVATADSSASLTSGSSPARSVRRRAVAKKGHVQDETRPHDHPVLKGGEGWAEPTPGEPPAPERRRSRTRRSYDQAASGASERHQSPPPCSCRPALPREAAPWRRGEAAPWRRGEAAPWRRGEAAPWRRGEAAFPLRRDMAAEESRCLLLHAASYSYPRFWVCLCLGSSSMVADT
SIO_010081: LOC117245234
subclass of: SO_0000673
so part of: LOC117245234
location: complement(join(71711..71756,71990..72384,72507..72671))
location: region:71711-72671:-1
so has part: feature:72507-72671:-1:exon
so has part: feature:71990-72384:-1:exon
so has part: feature:71711-71756:-1:exon

XP_033374401.1
type: Protein
SIO_000068: ncbiprotein

position:71711:-1
position: 71711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72507-72671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:71990-72384:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71711-71756:-1:exon

FBXW2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: FBXW2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 72376..81490
location: region:72376-81490:1
so has part: feature:72376-81490:1:exon
subclass of: SO_0000010

107212028
type: Gene
SIO_000068: ncbigene

position:72376:1
position: 72376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:81490:1
position: 81490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72376-81490:1:exon

FBXW2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FBXW2
product: F-box and WD repeat domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_015644774.2
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(72376..72555,74132..74641,75863..76057,76846..76979,77581..77667,78385..78554,80385..80986)
location: region:72376-80986:1
so has part: feature:72376-72555:1:exon
so has part: feature:74132-74641:1:exon
so has part: feature:75863-76057:1:exon
so has part: feature:76846-76979:1:exon
so has part: feature:77581-77667:1:exon
so has part: feature:78385-78554:1:exon
so has part: feature:80385-80986:1:exon

position:80986:1
position: 80986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72376-72555:1:exon

position:72555:1
position: 72555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:74132-74641:1:exon

position:74132:1
position: 74132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74641:1
position: 74641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:75863-76057:1:exon

position:75863:1
position: 75863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76057:1
position: 76057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:76846-76979:1:exon

position:76846:1
position: 76846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76979:1
position: 76979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:77581-77667:1:exon

position:77581:1
position: 77581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:77667:1
position: 77667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:78385-78554:1:exon

position:78385:1
position: 78385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78554:1
position: 78554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:80385-80986:1:exon

position:80385:1
position: 80385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXW2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FBXW2
product: F-box and WD repeat domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033518546.1
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(72376..72555,74224..74641,75863..76057,76846..76979,77581..77667,78385..78554,80385..80986)
location: region:72376-80986:1
so has part: feature:72376-72555:1:exon
so has part: feature:74224-74641:1:exon
so has part: feature:75863-76057:1:exon
so has part: feature:76846-76979:1:exon
so has part: feature:77581-77667:1:exon
so has part: feature:78385-78554:1:exon
so has part: feature:80385-80986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72376-72555:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74224-74641:1:exon

position:74224:1
position: 74224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:75863-76057:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:76846-76979:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:77581-77667:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78385-78554:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:80385-80986:1:exon

FBXW2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FBXW2
product: F-box and WD repeat domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_033518547.1
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(72647..74641,75863..76057,76846..76979,77581..77667,78385..78554,80385..81490)
location: region:72647-81490:1
so has part: feature:72647-74641:1:exon
so has part: feature:75863-76057:1:exon
so has part: feature:76846-76979:1:exon
so has part: feature:77581-77667:1:exon
so has part: feature:78385-78554:1:exon
so has part: feature:80385-81490:1:exon

position:72647:1
position: 72647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72647-74641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75863-76057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76846-76979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77581-77667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78385-78554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80385-81490:1:exon

FBXW2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FBXW2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 2 isoform X2
translation: MEKKDFEAWLDNISIAFLSLTDLQKNETLDHLISLSGAVQLRHLSNNLEILLKRDFLKLLPLELSFYLLKWLDPQTLLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDPLHWKKVYLKAILRMKQLKDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCIYGIQTHTCAAVKFDEQKLVTGSFDNTVACWEWSSGAKTQHFRGHTGAVFSVDYNDELDILVSGSADFTVKVWALSTGTCLNTLTGHTEWVTKVVLQKCKVKSLMHSPGDYILLSADKYEIKIWPIGREINCKCLRTLSVSEDRSISLQPRLHFDGKYIVCSSALGLYQWDFASYDILRVIKPPDFSNVSLLGFGEIFALLFDNRYLYIMDLRTEKLISRWPLPEYRKSKRGSSFLAGEMSWLNGLNGQNDTGLVFATSMPDHSIHLVLWKEHG
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(74152..74641,75863..76057,76846..76979,77581..77667,78385..78554,80385..80673)
location: region:74152-80673:1
so has part: feature:74152-74641:1:exon
so has part: feature:75863-76057:1:exon
so has part: feature:76846-76979:1:exon
so has part: feature:77581-77667:1:exon
so has part: feature:78385-78554:1:exon
so has part: feature:80385-80673:1:exon

XP_033374438.1
type: Protein
SIO_000068: ncbiprotein

position:74152:1
position: 74152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80673:1
position: 80673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74152-74641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75863-76057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76846-76979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77581-77667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78385-78554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80385-80673:1:exon

FBXW2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FBXW2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 2 isoform X2
translation: MEKKDFEAWLDNISIAFLSLTDLQKNETLDHLISLSGAVQLRHLSNNLEILLKRDFLKLLPLELSFYLLKWLDPQTLLTCCLVSKQWNKVISACTEVWQTACKNLGWQIDDSVQDPLHWKKVYLKAILRMKQLKDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCIYGIQTHTCAAVKFDEQKLVTGSFDNTVACWEWSSGAKTQHFRGHTGAVFSVDYNDELDILVSGSADFTVKVWALSTGTCLNTLTGHTEWVTKVVLQKCKVKSLMHSPGDYILLSADKYEIKIWPIGREINCKCLRTLSVSEDRSISLQPRLHFDGKYIVCSSALGLYQWDFASYDILRVIKPPDFSNVSLLGFGEIFALLFDNRYLYIMDLRTEKLISRWPLPEYRKSKRGSSFLAGEMSWLNGLNGQNDTGLVFATSMPDHSIHLVLWKEHG
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(74152..74641,75863..76057,76846..76979,77581..77667,78385..78554,80385..80673)
location: region:74152-80673:1
so has part: feature:74152-74641:1:exon
so has part: feature:75863-76057:1:exon
so has part: feature:76846-76979:1:exon
so has part: feature:77581-77667:1:exon
so has part: feature:78385-78554:1:exon
so has part: feature:80385-80673:1:exon

XP_015500260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74152-74641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75863-76057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76846-76979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77581-77667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78385-78554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80385-80673:1:exon

FBXW2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FBXW2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 2 isoform X1
translation: MKQLKDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCIYGIQTHTCAAVKFDEQKLVTGSFDNTVACWEWSSGAKTQHFRGHTGAVFSVDYNDELDILVSGSADFTVKVWALSTGTCLNTLTGHTEWVTKVVLQKCKVKSLMHSPGDYILLSADKYEIKIWPIGREINCKCLRTLSVSEDRSISLQPRLHFDGKYIVCSSALGLYQWDFASYDILRVIKPPDFSNVSLLGFGEIFALLFDNRYLYIMDLRTEKLISRWPLPEYRKSKRGSSFLAGEMSWLNGLNGQNDTGLVFATSMPDHSIHLVLWKEHG
SIO_010081: FBXW2
subclass of: SO_0000673
so part of: FBXW2
location: join(74539..74641,75863..76057,76846..76979,77581..77667,78385..78554,80385..80673)
location: region:74539-80673:1
so has part: feature:74539-74641:1:exon
so has part: feature:75863-76057:1:exon
so has part: feature:76846-76979:1:exon
so has part: feature:77581-77667:1:exon
so has part: feature:78385-78554:1:exon
so has part: feature:80385-80673:1:exon

XP_033374437.1
type: Protein
SIO_000068: ncbiprotein

position:74539:1
position: 74539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74539-74641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:75863-76057:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:76846-76979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:77581-77667:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78385-78554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80385-80673:1:exon

LOC107211971
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107211971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(82732..92321)
location: region:82732-92321:-1
so has part: feature:82732-92321:-1:exon
subclass of: SO_0000010

107211971
type: Gene
SIO_000068: ncbigene

position:82732:-1
position: 82732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92321:-1
position: 92321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82732-92321:-1:exon

LOC107211971
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107211971
product: uncharacterized LOC107211971, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033518558.1
SIO_010081: LOC107211971
subclass of: SO_0000673
so part of: LOC107211971
location: complement(join(82732..85606,90863..91002,91686..92321))
location: region:82732-92321:-1
so has part: feature:91686-92321:-1:exon
so has part: feature:90863-91002:-1:exon
so has part: feature:82732-85606:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:91686-92321:-1:exon

position:91686:-1
position: 91686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90863-91002:-1:exon

position:90863:-1
position: 90863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91002:-1
position: 91002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82732-85606:-1:exon

position:85606:-1
position: 85606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107211971
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107211971
product: uncharacterized LOC107211971, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015644611.2
SIO_010081: LOC107211971
subclass of: SO_0000673
so part of: LOC107211971
location: complement(join(82732..85884,86067..86147,90863..91636))
location: region:82732-91636:-1
so has part: feature:90863-91636:-1:exon
so has part: feature:86067-86147:-1:exon
so has part: feature:82732-85884:-1:exon

position:91636:-1
position: 91636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90863-91636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86067-86147:-1:exon

position:86067:-1
position: 86067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86147:-1
position: 86147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:82732-85884:-1:exon

position:85884:-1
position: 85884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107211971
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107211971
product: uncharacterized LOC107211971, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019008425.2
SIO_010081: LOC107211971
subclass of: SO_0000673
so part of: LOC107211971
location: complement(join(82732..85884,90863..91635))
location: region:82732-91635:-1
so has part: feature:90863-91635:-1:exon
so has part: feature:82732-85884:-1:exon

position:91635:-1
position: 91635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90863-91635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82732-85884:-1:exon

LOC107211971
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107211971
product: uncharacterized LOC107211971, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015644610.3
SIO_010081: LOC107211971
subclass of: SO_0000673
so part of: LOC107211971
location: complement(join(82732..85884,87834..90498))
location: region:82732-90498:-1
so has part: feature:87834-90498:-1:exon
so has part: feature:82732-85884:-1:exon

position:90498:-1
position: 90498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87834-90498:-1:exon

position:87834:-1
position: 87834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82732-85884:-1:exon

LOC107211971
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107211971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107211971 isoform X1
translation: MGCPRPMPRGTWKRGGRGQRGGWKAAARPGFPSSATDTPSLSGRDPRGRSPTAGADGVHSRGTATARSYEQPPRAPRAPPGPRRAGALPEVLQPGQGSAASLRPKPPPPARAGREGTGRSRRPRAAGACCVCCCRYRRQSQLRGARIPLRWLTMASYDVGWFGSAVPAVFHANFLCHATPGMGATGETRDGLDSAESKVTRLIGIVHHEDVKQLYCWFCCQPNGKIYVSKAKIDVHSDRFGFPYGAADIICLEPENCDPTHVSIHQSPHGNINQLPRFEIKNRKAETFSVDFTVCISAMFGNYNNVLQFIQSMEMYKILGVQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLRVSSEWHFMEDGTHIGYYGQITALNDCIYRNMERSKFVVLNDADEIILPLKHPNWKTMMNSLQEQNPGTSVFLFENHIFPETISSRMFNISSWNTVPGVNILQHVYREPDRKDVINPRKMIVDPRKVIQTSVHSVLRSYGNSANVPMDVALIYHCRKALQSNLPRESLIRDTTLWRYNSSLIMNVNKVLSRTMLRAQK
SIO_010081: LOC107211971
subclass of: SO_0000673
so part of: LOC107211971
location: complement(join(84517..85606,90863..91002,91686..92129))
location: region:84517-92129:-1
so has part: feature:91686-92129:-1:exon
so has part: feature:90863-91002:-1:exon
so has part: feature:84517-85606:-1:exon

XP_033374449.1
type: Protein
SIO_000068: ncbiprotein

position:84517:-1
position: 84517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92129:-1
position: 92129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:91686-92129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90863-91002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84517-85606:-1:exon

LOC107211971
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107211971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107211971 isoform X2
translation: MRQHKVQGQRNLHAHLDTYIMLCAGKKTYFAAAVCIITLTSILAVSYLRLQGLSHKPKVIQEGRRCRGKIANSTITALKDNKTFIISPYFDDRESKVTRLIGIVHHEDVKQLYCWFCCQPNGKIYVSKAKIDVHSDRFGFPYGAADIICLEPENCDPTHVSIHQSPHGNINQLPRFEIKNRKAETFSVDFTVCISAMFGNYNNVLQFIQSMEMYKILGVQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLRVSSEWHFMEDGTHIGYYGQITALNDCIYRNMERSKFVVLNDADEIILPLKHPNWKTMMNSLQEQNPGTSVFLFENHIFPETISSRMFNISSWNTVPGVNILQHVYREPDRKDVINPRKMIVDPRKVIQTSVHSVLRSYGNSANVPMDVALIYHCRKALQSNLPRESLIRDTTLWRYNSSLIMNVNKVLSRTMLRAQK
SIO_010081: LOC107211971
subclass of: SO_0000673
so part of: LOC107211971
location: complement(84517..85884)
location: region:84517-85884:-1
so has part: feature:84517-85884:-1:exon

XP_018863970.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84517-85884:-1:exon

LOC107211971
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107211971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107211971 isoform X2
translation: MRQHKVQGQRNLHAHLDTYIMLCAGKKTYFAAAVCIITLTSILAVSYLRLQGLSHKPKVIQEGRRCRGKIANSTITALKDNKTFIISPYFDDRESKVTRLIGIVHHEDVKQLYCWFCCQPNGKIYVSKAKIDVHSDRFGFPYGAADIICLEPENCDPTHVSIHQSPHGNINQLPRFEIKNRKAETFSVDFTVCISAMFGNYNNVLQFIQSMEMYKILGVQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLRVSSEWHFMEDGTHIGYYGQITALNDCIYRNMERSKFVVLNDADEIILPLKHPNWKTMMNSLQEQNPGTSVFLFENHIFPETISSRMFNISSWNTVPGVNILQHVYREPDRKDVINPRKMIVDPRKVIQTSVHSVLRSYGNSANVPMDVALIYHCRKALQSNLPRESLIRDTTLWRYNSSLIMNVNKVLSRTMLRAQK
SIO_010081: LOC107211971
subclass of: SO_0000673
so part of: LOC107211971
location: complement(84517..85884)
location: region:84517-85884:-1
so has part: feature:84517-85884:-1:exon

XP_015500096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84517-85884:-1:exon

LOC107211971
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107211971
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107211971 isoform X2
translation: MRQHKVQGQRNLHAHLDTYIMLCAGKKTYFAAAVCIITLTSILAVSYLRLQGLSHKPKVIQEGRRCRGKIANSTITALKDNKTFIISPYFDDRESKVTRLIGIVHHEDVKQLYCWFCCQPNGKIYVSKAKIDVHSDRFGFPYGAADIICLEPENCDPTHVSIHQSPHGNINQLPRFEIKNRKAETFSVDFTVCISAMFGNYNNVLQFIQSMEMYKILGVQKVVIYKNNCSHLMEKVLKFYIEEGTVEIIPWPINSHLRVSSEWHFMEDGTHIGYYGQITALNDCIYRNMERSKFVVLNDADEIILPLKHPNWKTMMNSLQEQNPGTSVFLFENHIFPETISSRMFNISSWNTVPGVNILQHVYREPDRKDVINPRKMIVDPRKVIQTSVHSVLRSYGNSANVPMDVALIYHCRKALQSNLPRESLIRDTTLWRYNSSLIMNVNKVLSRTMLRAQK
SIO_010081: LOC107211971
subclass of: SO_0000673
so part of: LOC107211971
location: complement(84517..85884)
location: region:84517-85884:-1
so has part: feature:84517-85884:-1:exon

XP_015500097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:84517-85884:-1:exon

RALGPS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(95107..197409)
location: region:95107-197409:-1
so has part: feature:95107-197409:-1:exon
subclass of: SO_0000010

107211970
type: Gene
SIO_000068: ncbigene

position:95107:-1
position: 95107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197409:-1
position: 197409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95107-197409:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015644594.3
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(95107..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172971..173146,176978..177094,197337..197409))
location: region:95107-197409:-1
so has part: feature:197337-197409:-1:exon
so has part: feature:176978-177094:-1:exon
so has part: feature:172971-173146:-1:exon
so has part: feature:171092-171207:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:95107-97874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197337-197409:-1:exon

position:197337:-1
position: 197337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176978-177094:-1:exon

position:176978:-1
position: 176978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177094:-1
position: 177094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
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RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033518552.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
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location: region:95107-197361:-1
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SIO_000300: 17
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SIO_000628: feature:95107-97874:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033518550.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(95107..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,173067..173146,176978..177094,179363..179462))
location: region:95107-179462:-1
so has part: feature:179363-179462:-1:exon
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position:179462:-1
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urn:…
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SIO_000628: feature:102569-102620:-1:exon

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SIO_000628: feature:95107-97874:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033518551.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(95107..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172094..172208,173067..173146,176978..177094,179363..179462))
location: region:95107-179462:-1
so has part: feature:179363-179462:-1:exon
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urn:…
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reference: sequence
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urn:…
SIO_000300: 5
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RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033518554.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(95107..97874,98276..98367,99767..99872,100047..100139,101211..101316,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172971..173146,176978..177094,179363..179462))
location: region:95107-179462:-1
so has part: feature:179363-179462:-1:exon
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urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:101211-101316:-1:exon

position:101316:-1
position: 101316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:95107-97874:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015644595.3
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(95107..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172971..173146,176978..177094,179363..179462))
location: region:95107-179462:-1
so has part: feature:179363-179462:-1:exon
so has part: feature:176978-177094:-1:exon
so has part: feature:172971-173146:-1:exon
so has part: feature:171092-171207:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:95107-97874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179363-179462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176978-177094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172971-173146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171092-171207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:95107-97874:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033518549.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(95107..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172094..172208,172971..173146,176978..177094,179363..179462))
location: region:95107-179462:-1
so has part: feature:179363-179462:-1:exon
so has part: feature:176978-177094:-1:exon
so has part: feature:172971-173146:-1:exon
so has part: feature:172094-172208:-1:exon
so has part: feature:171092-171207:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:95107-97874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179363-179462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176978-177094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172971-173146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:172094-172208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171092-171207:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:95107-97874:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033518553.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(95107..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172971..173146,174920..174942))
location: region:95107-174942:-1
so has part: feature:174920-174942:-1:exon
so has part: feature:172971-173146:-1:exon
so has part: feature:171092-171207:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:95107-97874:-1:exon

position:174942:-1
position: 174942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174920-174942:-1:exon

position:174920:-1
position: 174920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172971-173146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:171092-171207:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:95107-97874:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSELSAIMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPPERPRHLLDDSVLECHSPARGHPPGTRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWRVPIRNSPRNRSCVYSPTGACSCTAGGSTGVITMEGPLRRKTMLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(97845..97874,98276..98367,99767..99872,100047..100139,101211..101316,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:97845-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101316:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:97845-97874:-1:exon

XP_033374445.1
type: Protein
SIO_000068: ncbiprotein

position:97845:-1
position: 97845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:171148:-1
position: 171148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101211-101316:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:97845-97874:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSELSAIMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPPERPRHLLDDSVLECHSPARGHPPGTRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWRVPIRNSPRNRSCVYRGMLCLSSPTGACSCTAGGSTGVITMEGPLRRKTMLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(97845..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:97845-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:97845-97874:-1:exon

XP_033374440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:97845-97874:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSELSAIMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPPERPRHLLDDSVLECHSPARGHPPGTRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWRVPIRNSPRNRSCVYRGMLCLSSPTGACSCTAGGSTGVITMEGPLRRKTMLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(97845..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:97845-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:97845-97874:-1:exon

XP_033374441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:97845-97874:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSELSAIMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPPERPRHLLDDSVLECHSPARGHPPGTRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWRVPIRNSPRNRSCVYRGMLCLSSPTGACSCTAGGSTGVITMEGPLRRKTMLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(97845..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:97845-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:97845-97874:-1:exon

XP_033374442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:97845-97874:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSELSAIMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPPERPRHLLDDSVLECHSPARGHPPGTRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWRVPIRNSPRNRSCVYRGMLCLSSPTGACSCTAGGSTGVITMEGPLRRKTMLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(97845..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:97845-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:97845-97874:-1:exon

XP_033374443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:97845-97874:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSELSAIMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPPERPRHLLDDSVLECHSPARGHPPGTRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWRVPIRNSPRNRSCVYRGMLCLSSPTGACSCTAGGSTGVITMEGPLRRKTMLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(97845..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:97845-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:97845-97874:-1:exon

XP_033374444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:97845-97874:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSELSAIMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPPERPRHLLDDSVLECHSPARGHPPGTRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWRVPIRNSPRNRSCVYRGMLCLSSPTGACSCTAGGSTGVITMEGPLRRKTMLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(97845..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:97845-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:97845-97874:-1:exon

XP_015500080.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:97845-97874:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSELSAIMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPPERPRHLLDDSVLECHSPARGHPPGTRLANGLSRDSSESSEFSEELPSGLERGRLYATLGPNWRVPIRNSPRNRSCVYRGMLCLSSPTGACSCTAGGSTGVITMEGPLRRKTMLKEGKKPTLSSWTRYWVMLSGSTLLYFGAKALRGTERKHYKSTPGKKVSIVGWMVALPDDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSNKPQVPANLMSFE
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(97845..97874,98276..98367,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:97845-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98276-98367:-1:exon
so has part: feature:97845-97874:-1:exon

XP_015500081.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:98276-98367:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:97845-97874:-1:exon

RALGPS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004499696.1
SIO_010081: RALGPS1
so part of: RALGPS1
location: complement(join(98276..98367,98976..99115,99767..99872,100047..100139,101211..101337,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172971..173146,176978..177094,179363..179462))
location: region:98276-179462:-1
so has part: feature:179363-179462:-1:exon
so has part: feature:176978-177094:-1:exon
so has part: feature:172971-173146:-1:exon
so has part: feature:171092-171207:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon
so has part: feature:98976-99115:-1:exon
so has part: feature:98276-98367:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179363-179462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176978-177094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172971-173146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171092-171207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:99767-99872:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:98976-99115:-1:exon

position:98976:-1
position: 98976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99115:-1
position: 99115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:98276-98367:-1:exon

RALGPS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004499697.1
SIO_010081: RALGPS1
so part of: RALGPS1
location: complement(join(99767..99872,100047..100139,101211..101337,102216..102296,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172971..173146,176978..177094,179363..179462))
location: region:99767-179462:-1
so has part: feature:179363-179462:-1:exon
so has part: feature:176978-177094:-1:exon
so has part: feature:172971-173146:-1:exon
so has part: feature:171092-171207:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101337:-1:exon
so has part: feature:100047-100139:-1:exon
so has part: feature:99767-99872:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:179363-179462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176978-177094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172971-173146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171092-171207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101211-101337:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100047-100139:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:99767-99872:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033518555.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(100049..100139,101211..101316,102216..102296,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172971..173146,176978..177094,179363..179462))
location: region:100049-179462:-1
so has part: feature:179363-179462:-1:exon
so has part: feature:176978-177094:-1:exon
so has part: feature:172971-173146:-1:exon
so has part: feature:171092-171207:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101211-101316:-1:exon
so has part: feature:100049-100139:-1:exon

position:100049:-1
position: 100049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179363-179462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176978-177094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172971-173146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171092-171207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101211-101316:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:100049-100139:-1:exon

RALGPS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004499698.1
SIO_010081: RALGPS1
so part of: RALGPS1
location: complement(join(101239..101316,101901..101975,102216..102296,102569..102620,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172971..173146,176978..177094,179363..179462))
location: region:101239-179462:-1
so has part: feature:179363-179462:-1:exon
so has part: feature:176978-177094:-1:exon
so has part: feature:172971-173146:-1:exon
so has part: feature:171092-171207:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102569-102620:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101901-101975:-1:exon
so has part: feature:101239-101316:-1:exon

position:101239:-1
position: 101239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179363-179462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176978-177094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172971-173146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171092-171207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102569-102620:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:101901-101975:-1:exon

position:101901:-1
position: 101901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:101975:-1
position: 101975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:101239-101316:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSELSAIMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPPERPRHLLDDSVLECHSPARGHPPGTRLANGLSRGVVYMPHWVLTGGYQSGILLGIEAVYTAQQVHAAAQQVVPQESLPWKGH
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(101249..101316,102216..102296,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:101249-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101249-101316:-1:exon

XP_033374446.1
type: Protein
SIO_000068: ncbiprotein

position:101249:-1
position: 101249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101249-101316:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033518556.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(101917..101975,102216..102296,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172971..173146,176978..177094,179363..179462))
location: region:101917-179462:-1
so has part: feature:179363-179462:-1:exon
so has part: feature:176978-177094:-1:exon
so has part: feature:172971-173146:-1:exon
so has part: feature:171092-171207:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101917-101975:-1:exon

position:101917:-1
position: 101917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179363-179462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176978-177094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172971-173146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171092-171207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:101917-101975:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X4
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAGPSELSAIMKFSRRPTCPDASVAASLPTPPVPRHRKSHSLGNNMMCQLSVVESKSATFPPERPRHLLDDSVLECHSPARGHPPGTRLANGLSRGVVYMPHWVLTGGYQSGILLGIEAVYTEN
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(101968..101975,102216..102296,103798..103949,104517..104643,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:101968-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:104517-104643:-1:exon
so has part: feature:103798-103949:-1:exon
so has part: feature:102216-102296:-1:exon
so has part: feature:101968-101975:-1:exon

XP_033374447.1
type: Protein
SIO_000068: ncbiprotein

position:101968:-1
position: 101968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:104517-104643:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:103798-103949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:102216-102296:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:101968-101975:-1:exon

RALGPS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RALGPS1
product: Ral GEF with PH domain and SH3 binding motif 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_033518557.1
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(104550..104643,114700..114850,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171207,172971..173146,176978..177094,179363..179462))
location: region:104550-179462:-1
so has part: feature:179363-179462:-1:exon
so has part: feature:176978-177094:-1:exon
so has part: feature:172971-173146:-1:exon
so has part: feature:171092-171207:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:114700-114850:-1:exon
so has part: feature:104550-104643:-1:exon

position:104550:-1
position: 104550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179363-179462:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176978-177094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172971-173146:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:171092-171207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:114700-114850:-1:exon

position:114700:-1
position: 114700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114850:-1
position: 114850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:104550-104643:-1:exon

RALGPS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RALGPS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X5
translation: MYKRNDLMANVMVTSATPEGSSSSDSLEGRSSDYANKSYDAVVFDVLKVTPEEFASQITLMDMPVFKAIQPEELASCGWNKKEKHTLAPNIVAFTRRFNQVSFWVVREILTAQTLKIRAEILSHFVKIAKKLLELNNLHSLMSVVSALQSAPIFRLTKTWALLNRKDKTTFEKLDYLLSKEDNYKRTREYIRSLKMVPTIPYLGIYLLDLIYIDSAYPASDSIMENEQRSNQMNNILRIIADLQVSCNYDHLTTLPHVQKYLKSVHYIEELQKFVEDDNYKLSLRIEPGNSSPRLVSSKEDLAEMHLEVNFLTGAITVLYSVSVSGKVLRRLLLSSAHCIKAISPNPTPCQKDRSI
SIO_010081: RALGPS1
subclass of: SO_0000673
so part of: RALGPS1
location: complement(join(104634..104643,114700..114850,115874..115941,126354..126447,128142..128279,161455..161581,163472..163564,165197..165286,165769..165852,168798..168848,169252..169359,171092..171148))
location: region:104634-171148:-1
so has part: feature:171092-171148:-1:exon
so has part: feature:169252-169359:-1:exon
so has part: feature:168798-168848:-1:exon
so has part: feature:165769-165852:-1:exon
so has part: feature:165197-165286:-1:exon
so has part: feature:163472-163564:-1:exon
so has part: feature:161455-161581:-1:exon
so has part: feature:128142-128279:-1:exon
so has part: feature:126354-126447:-1:exon
so has part: feature:115874-115941:-1:exon
so has part: feature:114700-114850:-1:exon
so has part: feature:104634-104643:-1:exon

XP_033374448.1
type: Protein
SIO_000068: ncbiprotein

position:104634:-1
position: 104634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171092-171148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:169252-169359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:168798-168848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:165769-165852:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:165197-165286:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:163472-163564:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:161455-161581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:128142-128279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:126354-126447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:115874-115941:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:114700-114850:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:104634-104643:-1:exon

ANGPTL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ANGPTL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 137842..154730
location: region:137842-154730:1
so has part: feature:137842-154730:1:exon
subclass of: SO_0000010

107211972
type: Gene
SIO_000068: ncbigene

position:137842:1
position: 137842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154730:1
position: 154730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:137842-154730:1:exon

ANGPTL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ANGPTL2
product: angiopoietin like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_015644612.3
SIO_010081: ANGPTL2
subclass of: SO_0000673
so part of: ANGPTL2
location: join(137842..138289,146859..147715,151910..152103,152345..152615,153145..154730)
location: region:137842-154730:1
so has part: feature:137842-138289:1:exon
so has part: feature:146859-147715:1:exon
so has part: feature:151910-152103:1:exon
so has part: feature:152345-152615:1:exon
so has part: feature:153145-154730:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:137842-138289:1:exon

position:138289:1
position: 138289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146859-147715:1:exon

position:146859:1
position: 146859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147715:1
position: 147715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:151910-152103:1:exon

position:151910:1
position: 151910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152103:1
position: 152103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:152345-152615:1:exon

position:152345:1
position: 152345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152615:1
position: 152615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:153145-154730:1:exon

position:153145:1
position: 153145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANGPTL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ANGPTL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiopoietin-related protein 2
translation: MMTKGFICLMLATVVGVTTSETQEFEGNEKEKAQEFIYMNRYKRSSDTQDKCTYTFIVPQQRVTGAICVNSKEPEVLLENRVNKQELQLLNNELLKQKRQIETLQQLVEVDGGIVNEVKLLRKESRNMNSRVTQLYMQLLHEIIRKRDNALELSQLENKILNQTADMLQLANKYKDLEHKYQHLMSIANNQTIVIAQLEEHCQRMPSIKPPPQTPQPPMKVYQPPTYNRINNQISTNEIQSDQNLKVLPPTLPTMPAVTSIPTSTDKPSGPWRDCLQALEDGHDTSSIYLVKPENTNQLMQVWCDQRHDPGGWTVIQRRLDGSVNFFRNWETYKQGFGNIDGEYWLGLENIYWLTNQGNYKLLITMEDWSGRKVFAEYASFRLEPESEYYKLRLGRYNGNAGDSFTWHNGKQFTTLDRDHDVYTGNCAHYQKGGWWYNACAHSNLNGVWYRGGHYRSRYQDGVYWAEFRGGSYSLKKVVMMIRPNPNTFH
SIO_010081: ANGPTL2
subclass of: SO_0000673
so part of: ANGPTL2
location: join(146908..147715,151910..152103,152345..152615,153145..153344)
location: region:146908-153344:1
so has part: feature:146908-147715:1:exon
so has part: feature:151910-152103:1:exon
so has part: feature:152345-152615:1:exon
so has part: feature:153145-153344:1:exon

XP_015500098.1
type: Protein
SIO_000068: ncbiprotein

position:146908:1
position: 146908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153344:1
position: 153344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146908-147715:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151910-152103:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:152345-152615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:153145-153344:1:exon

ZBTB34
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(182637..205078)
location: region:182637-205078:-1
so has part: feature:182637-205078:-1:exon
subclass of: SO_0000010

117245235
type: Gene
SIO_000068: ncbigene

position:182637:-1
position: 182637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205078:-1
position: 205078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182637-205078:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033518567.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(182637..188907,205000..205078))
location: region:182637-205078:-1
so has part: feature:205000-205078:-1:exon
so has part: feature:182637-188907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205000-205078:-1:exon

position:205000:-1
position: 205000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182637-188907:-1:exon

position:188907:-1
position: 188907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033518565.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(182637..188907,197998..198124))
location: region:182637-198124:-1
so has part: feature:197998-198124:-1:exon
so has part: feature:182637-188907:-1:exon

position:198124:-1
position: 198124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197998-198124:-1:exon

position:197998:-1
position: 197998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182637-188907:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033518561.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(182637..188907,189870..189981,197947..198093))
location: region:182637-198093:-1
so has part: feature:197947-198093:-1:exon
so has part: feature:189870-189981:-1:exon
so has part: feature:182637-188907:-1:exon

position:198093:-1
position: 198093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197947-198093:-1:exon

position:197947:-1
position: 197947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:189870-189981:-1:exon

position:189870:-1
position: 189870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189981:-1
position: 189981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182637-188907:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033518564.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(182637..188907,189870..189981,197998..198069))
location: region:182637-198069:-1
so has part: feature:197998-198069:-1:exon
so has part: feature:189870-189981:-1:exon
so has part: feature:182637-188907:-1:exon

position:198069:-1
position: 198069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197998-198069:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:189870-189981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182637-188907:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_033518560.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(182637..188907,189870..195723,197337..197446))
location: region:182637-197446:-1
so has part: feature:197337-197446:-1:exon
so has part: feature:189870-195723:-1:exon
so has part: feature:182637-188907:-1:exon

position:197446:-1
position: 197446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197337-197446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:189870-195723:-1:exon

position:195723:-1
position: 195723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182637-188907:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_033518562.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(182637..188907,189870..193354,197337..197443))
location: region:182637-197443:-1
so has part: feature:197337-197443:-1:exon
so has part: feature:189870-193354:-1:exon
so has part: feature:182637-188907:-1:exon

position:197443:-1
position: 197443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197337-197443:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:189870-193354:-1:exon

position:193354:-1
position: 193354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182637-188907:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_033518566.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(182637..188907,197337..197439))
location: region:182637-197439:-1
so has part: feature:197337-197439:-1:exon
so has part: feature:182637-188907:-1:exon

position:197439:-1
position: 197439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197337-197439:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182637-188907:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033518563.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(182637..188907,189870..189981,197337..197435))
location: region:182637-197435:-1
so has part: feature:197337-197435:-1:exon
so has part: feature:189870-189981:-1:exon
so has part: feature:182637-188907:-1:exon

position:197435:-1
position: 197435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197337-197435:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:189870-189981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182637-188907:-1:exon

ZBTB34
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB34
product: zinc finger and BTB domain containing 34, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_033518559.1
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(182637..188907,189870..197276))
location: region:182637-197276:-1
so has part: feature:189870-197276:-1:exon
so has part: feature:182637-188907:-1:exon

position:197276:-1
position: 197276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189870-197276:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182637-188907:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDVEICLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVDDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMESTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTETFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(187386..188907,189870..189907))
location: region:187386-189907:-1
so has part: feature:189870-189907:-1:exon
so has part: feature:187386-188907:-1:exon

XP_033374450.1
type: Protein
SIO_000068: ncbiprotein

position:187386:-1
position: 187386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189907:-1
position: 189907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:189870-189907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187386-188907:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDVEICLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVDDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMESTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTETFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(187386..188907,189870..189907))
location: region:187386-189907:-1
so has part: feature:189870-189907:-1:exon
so has part: feature:187386-188907:-1:exon

XP_033374451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189870-189907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187386-188907:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDVEICLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVDDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMESTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTETFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(187386..188907,189870..189907))
location: region:187386-189907:-1
so has part: feature:189870-189907:-1:exon
so has part: feature:187386-188907:-1:exon

XP_033374452.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189870-189907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187386-188907:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDVEICLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVDDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMESTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTETFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(187386..188907,189870..189907))
location: region:187386-189907:-1
so has part: feature:189870-189907:-1:exon
so has part: feature:187386-188907:-1:exon

XP_033374453.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189870-189907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187386-188907:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDVEICLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVDDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMESTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTETFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(187386..188907,189870..189907))
location: region:187386-189907:-1
so has part: feature:189870-189907:-1:exon
so has part: feature:187386-188907:-1:exon

XP_033374454.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189870-189907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187386-188907:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X1
translation: MDVEICLFNWKSRLLFTSVEMDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVDDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMESTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTETFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(join(187386..188907,189870..189907))
location: region:187386-189907:-1
so has part: feature:189870-189907:-1:exon
so has part: feature:187386-188907:-1:exon

XP_033374455.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:189870-189907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187386-188907:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X2
translation: MDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVDDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMESTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTETFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(187386..188885)
location: region:187386-188885:-1
so has part: feature:187386-188885:-1:exon

XP_033374456.1
type: Protein
SIO_000068: ncbiprotein

position:188885:-1
position: 188885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187386-188885:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X2
translation: MDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVDDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMESTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTETFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(187386..188885)
location: region:187386-188885:-1
so has part: feature:187386-188885:-1:exon

XP_033374457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187386-188885:-1:exon

ZBTB34
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB34
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 34 isoform X2
translation: MDSSSFIQFDVPEYSNTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVDDVDSVTVGAEENSENRNGVKDSSYFANPIEISPPYCSQVRQSTAGSDLRMESTPGKTLRSRLQEEGHSDRGSSGSISEYEIQIEGDHEQGDLIVRESQIAEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHVYSFTHASSQATGVSETFGSLSNTSPSRSMLSCFRGGRARQKRVPTGHLHSDVQGLVQGADSESMVSNPGYENSPRERNARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLEYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVTEVRNRVESPDRTETFVEQKVDNDASASEAMDSSMEIHAMSNTSD
SIO_010081: ZBTB34
subclass of: SO_0000673
so part of: ZBTB34
location: complement(187386..188885)
location: region:187386-188885:-1
so has part: feature:187386-188885:-1:exon

XP_033374458.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:187386-188885:-1:exon

ZBTB43
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(198584..208607)
location: region:198584-208607:-1
so has part: feature:198584-208607:-1:exon
subclass of: SO_0000010

107211921
type: Gene
SIO_000068: ncbigene

position:198584:-1
position: 198584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208607:-1
position: 208607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198584-208607:-1:exon

ZBTB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB43
product: zinc finger and BTB domain containing 43, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_033518571.1
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(198584..198702,205000..206229,208489..208607))
location: region:198584-208607:-1
so has part: feature:208489-208607:-1:exon
so has part: feature:205000-206229:-1:exon
so has part: feature:198584-198702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:208489-208607:-1:exon

position:208489:-1
position: 208489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:205000-206229:-1:exon

position:206229:-1
position: 206229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198584-198702:-1:exon

position:198702:-1
position: 198702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 43 isoform X2
translation: MESGSSSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHLFRAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSTYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKMNHGSDHQSPSSSSYNGLVETFELGSGGQTEFHKVQELRDVENEEESSKDELSCQLTEHEYLPSNSSTEHDRLSTGMTSQDGEEGTSDSAEYQYTRPMYSKPSIMSHKRWIHVKPERFEQDCEGVDNPYDEHQVSESMNAIQADHSIQSSGVEDFHIGDKKMEAEFDEQADESNYDEQVDFYGSSMEEFSGERADGNISAHRQDLMMAAGYGESIDMAAGIKEETSLTGFSHADKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCEW
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(198695..198702,205000..206206))
location: region:198695-206206:-1
so has part: feature:205000-206206:-1:exon
so has part: feature:198695-198702:-1:exon

XP_033374462.1
type: Protein
SIO_000068: ncbiprotein

position:198695:-1
position: 198695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:206206:-1
position: 206206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205000-206206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198695-198702:-1:exon

ZBTB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB43
product: zinc finger and BTB domain containing 43, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_033518568.1
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(198899..206229,208489..208606))
location: region:198899-208606:-1
so has part: feature:208489-208606:-1:exon
so has part: feature:198899-206229:-1:exon

position:198899:-1
position: 198899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208606:-1
position: 208606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208489-208606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:198899-206229:-1:exon

ZBTB43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZBTB43
product: zinc finger and BTB domain containing 43, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033518570.1
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(join(201112..206229,208130..208153))
location: region:201112-208153:-1
so has part: feature:208130-208153:-1:exon
so has part: feature:201112-206229:-1:exon

position:201112:-1
position: 201112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:208153:-1
position: 208153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:208130-208153:-1:exon

position:208130:-1
position: 208130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201112-206229:-1:exon

ZBTB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 43 isoform X1
translation: MESGSSSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHLFRAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSTYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKMNHGSDHQSPSSSSYNGLVETFELGSGGQTEFHKVQELRDVENEEESSKDELSCQLTEHEYLPSNSSTEHDRLSTGMTSQDGEEGTSDSAEYQYTRPMYSKPSIMSHKRWIHVKPERFEQDCEGVDNPYDEHQVSESMNAIQADHSIQSSGVEDFHIGDKKMEAEFDEQADESNYDEQVDFYGSSMEEFSGERADGNISAHRQDLMMAAGYGESIDMAAGIKEETSLTGFSHADKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICGKRFMWRDSFHRHVTSCTKSYQASKAEQSTTDMN
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(204812..206206)
location: region:204812-206206:-1
so has part: feature:204812-206206:-1:exon

XP_033374459.1
type: Protein
SIO_000068: ncbiprotein

position:204812:-1
position: 204812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204812-206206:-1:exon

ZBTB43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZBTB43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and BTB domain-containing protein 43 isoform X1
translation: MESGSSSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHLFRAHKAVLAASSPYFCDQVLLKNSRRIVLPDVMNPRVFENILLSTYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCTEVLEGNPTVLCQKMNHGSDHQSPSSSSYNGLVETFELGSGGQTEFHKVQELRDVENEEESSKDELSCQLTEHEYLPSNSSTEHDRLSTGMTSQDGEEGTSDSAEYQYTRPMYSKPSIMSHKRWIHVKPERFEQDCEGVDNPYDEHQVSESMNAIQADHSIQSSGVEDFHIGDKKMEAEFDEQADESNYDEQVDFYGSSMEEFSGERADGNISAHRQDLMMAAGYGESIDMAAGIKEETSLTGFSHADKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICGKRFMWRDSFHRHVTSCTKSYQASKAEQSTTDMN
SIO_010081: ZBTB43
subclass of: SO_0000673
so part of: ZBTB43
location: complement(204812..206206)
location: region:204812-206206:-1
so has part: feature:204812-206206:-1:exon

XP_033374461.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:204812-206206:-1:exon

LMX1B
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LMX1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(295267..379297)
location: region:295267-379297:-1
so has part: feature:295267-379297:-1:exon
subclass of: SO_0000010

107212237
type: Gene
SIO_000068: ncbigene

position:295267:-1
position: 295267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379297:-1
position: 379297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295267-379297:-1:exon

LMX1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LMX1B
product: LIM homeobox transcription factor 1 beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015645269.3
SIO_010081: LMX1B
subclass of: SO_0000673
so part of: LMX1B
location: complement(join(295267..295904,297589..297750,298611..298677,299075..299152,299529..299707,302268..302500,378343..378529,378829..379297))
location: region:295267-379297:-1
so has part: feature:378829-379297:-1:exon
so has part: feature:378343-378529:-1:exon
so has part: feature:302268-302500:-1:exon
so has part: feature:299529-299707:-1:exon
so has part: feature:299075-299152:-1:exon
so has part: feature:298611-298677:-1:exon
so has part: feature:297589-297750:-1:exon
so has part: feature:295267-295904:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378829-379297:-1:exon

position:378829:-1
position: 378829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:378343-378529:-1:exon

position:378343:-1
position: 378343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378529:-1
position: 378529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:302268-302500:-1:exon

position:302268:-1
position: 302268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302500:-1
position: 302500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299529-299707:-1:exon

position:299529:-1
position: 299529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299707:-1
position: 299707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:299075-299152:-1:exon

position:299075:-1
position: 299075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299152:-1
position: 299152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:298611-298677:-1:exon

position:298611:-1
position: 298611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298677:-1
position: 298677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:297589-297750:-1:exon

position:297589:-1
position: 297589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297750:-1
position: 297750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:295267-295904:-1:exon

position:295904:-1
position: 295904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMX1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LMX1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM homeobox transcription factor 1-beta
translation: MDIATAPESLERCFPRGPPDCAKMLDGIKMEDHPLRSGPATLGVLLGSECQHQAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDYQQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEKEKDLLSSVSPDDSDSVKSDDEDGDVKPTKGQVTQGKGSDDGKDPRRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRHQQQQEQQNSQRLGQEVMSNRMEGMMTSYTPLAPPQQQIVAMEQSSYGTDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSDTSLTSLSDCFLASSEVNSMQARVGNPIDRLYSMQSSYFAS
SIO_010081: LMX1B
subclass of: SO_0000673
so part of: LMX1B
location: complement(join(295747..295904,297589..297750,298611..298677,299075..299152,299529..299707,302268..302500,378343..378529,378829..378967))
location: region:295747-378967:-1
so has part: feature:378829-378967:-1:exon
so has part: feature:378343-378529:-1:exon
so has part: feature:302268-302500:-1:exon
so has part: feature:299529-299707:-1:exon
so has part: feature:299075-299152:-1:exon
so has part: feature:298611-298677:-1:exon
so has part: feature:297589-297750:-1:exon
so has part: feature:295747-295904:-1:exon

XP_015500755.1
type: Protein
SIO_000068: ncbiprotein

position:295747:-1
position: 295747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378967:-1
position: 378967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378829-378967:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:378343-378529:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:302268-302500:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299529-299707:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299075-299152:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:298611-298677:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297589-297750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:295747-295904:-1:exon

LOC109022893
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC109022893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 379598..382707
location: region:379598-382707:1
so has part: feature:379598-382707:1:exon
subclass of: SO_0000011

109022893
type: Gene
SIO_000068: ncbigene

position:379598:1
position: 379598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382707:1
position: 382707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:379598-382707:1:exon

LOC109022893
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC109022893
product: uncharacterized LOC109022893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002002320.1
SIO_010081: LOC109022893
subclass of: SO_0000673
so part of: LOC109022893
location: join(379598..379793,382178..382707)
location: region:379598-382707:1
so has part: feature:379598-379793:1:exon
so has part: feature:382178-382707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:379598-379793:1:exon

position:379793:1
position: 379793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382178-382707:1:exon

position:382178:1
position: 382178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MVB12B
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(422599..482421)
location: region:422599-482421:-1
so has part: feature:422599-482421:-1:exon
subclass of: SO_0000010

107212073
type: Gene
SIO_000068: ncbigene

position:422599:-1
position: 422599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482421:-1
position: 482421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422599-482421:-1:exon

MVB12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MVB12B
product: multivesicular body subunit 12B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019008450.2
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(422599..429412,433674..433733,435081..435136,453735..453832,465942..466064,466345..466474,468782..468878,471892..471999,477188..477310,477456..477574,478351..482421))
location: region:422599-482421:-1
so has part: feature:478351-482421:-1:exon
so has part: feature:477456-477574:-1:exon
so has part: feature:477188-477310:-1:exon
so has part: feature:471892-471999:-1:exon
so has part: feature:468782-468878:-1:exon
so has part: feature:466345-466474:-1:exon
so has part: feature:465942-466064:-1:exon
so has part: feature:453735-453832:-1:exon
so has part: feature:435081-435136:-1:exon
so has part: feature:433674-433733:-1:exon
so has part: feature:422599-429412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:478351-482421:-1:exon

position:478351:-1
position: 478351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477456-477574:-1:exon

position:477456:-1
position: 477456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477574:-1
position: 477574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:477188-477310:-1:exon

position:477188:-1
position: 477188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477310:-1
position: 477310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:471892-471999:-1:exon

position:471892:-1
position: 471892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471999:-1
position: 471999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:468782-468878:-1:exon

position:468782:-1
position: 468782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468878:-1
position: 468878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:466345-466474:-1:exon

position:466345:-1
position: 466345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466474:-1
position: 466474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:465942-466064:-1:exon

position:465942:-1
position: 465942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466064:-1
position: 466064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:453735-453832:-1:exon

position:453735:-1
position: 453735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453832:-1
position: 453832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:435081-435136:-1:exon

position:435081:-1
position: 435081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435136:-1
position: 435136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:433674-433733:-1:exon

position:433674:-1
position: 433674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433733:-1
position: 433733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:422599-429412:-1:exon

position:429412:-1
position: 429412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MVB12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MVB12B
product: multivesicular body subunit 12B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_015644881.3
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(422599..429412,433674..433733,435081..435136,453735..453832,465942..466064,466345..466474,468782..468878,471892..471999,477188..477310,478351..482420))
location: region:422599-482420:-1
so has part: feature:478351-482420:-1:exon
so has part: feature:477188-477310:-1:exon
so has part: feature:471892-471999:-1:exon
so has part: feature:468782-468878:-1:exon
so has part: feature:466345-466474:-1:exon
so has part: feature:465942-466064:-1:exon
so has part: feature:453735-453832:-1:exon
so has part: feature:435081-435136:-1:exon
so has part: feature:433674-433733:-1:exon
so has part: feature:422599-429412:-1:exon

position:482420:-1
position: 482420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478351-482420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477188-477310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:471892-471999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:468782-468878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466345-466474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:465942-466064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453735-453832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435081-435136:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:433674-433733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:422599-429412:-1:exon

MVB12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multivesicular body subunit 12B isoform X1
translation: MKVQKDQSIMPEVRDLTDALPDLPMDPITGVGVVASRSRAPTGYDVVAQTADGLDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIKDTLPVGFMPIQETIDTQEVAFRKKRLCIKFIPRDSTEAAICDIRILGRSKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSAQPAAPPAQAPASTPAPNLPRHISLTLPASFRGKSHSTRLDLEHQHSNLYAISAMDGVPFMISEKFACAPEGMQPVDLLGITIKTLAEIEKEYDYSFRTEQSAAARLPPSPTRCPPGPPS
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(429326..429412,433674..433733,435081..435136,453735..453832,465942..466064,466345..466474,468782..468878,471892..471999,477188..477310,477456..477470))
location: region:429326-477470:-1
so has part: feature:477456-477470:-1:exon
so has part: feature:477188-477310:-1:exon
so has part: feature:471892-471999:-1:exon
so has part: feature:468782-468878:-1:exon
so has part: feature:466345-466474:-1:exon
so has part: feature:465942-466064:-1:exon
so has part: feature:453735-453832:-1:exon
so has part: feature:435081-435136:-1:exon
so has part: feature:433674-433733:-1:exon
so has part: feature:429326-429412:-1:exon

XP_018863995.1
type: Protein
SIO_000068: ncbiprotein

position:429326:-1
position: 429326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477470:-1
position: 477470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477456-477470:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477188-477310:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:471892-471999:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:468782-468878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466345-466474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:465942-466064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453735-453832:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:435081-435136:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:433674-433733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:429326-429412:-1:exon

MVB12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MVB12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: multivesicular body subunit 12B isoform X2
translation: MPEVRDLTDALPDLPMDPITGVGVVASRSRAPTGYDVVAQTADGLDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIKDTLPVGFMPIQETIDTQEVAFRKKRLCIKFIPRDSTEAAICDIRILGRSKQAPPQYTFIGELNSMGIWYRMGRVPRNHDSAQPAAPPAQAPASTPAPNLPRHISLTLPASFRGKSHSTRLDLEHQHSNLYAISAMDGVPFMISEKFACAPEGMQPVDLLGITIKTLAEIEKEYDYSFRTEQSAAARLPPSPTRCPPGPPS
SIO_010081: MVB12B
subclass of: SO_0000673
so part of: MVB12B
location: complement(join(429326..429412,433674..433733,435081..435136,453735..453832,465942..466064,466345..466474,468782..468878,471892..471999,477188..477298))
location: region:429326-477298:-1
so has part: feature:477188-477298:-1:exon
so has part: feature:471892-471999:-1:exon
so has part: feature:468782-468878:-1:exon
so has part: feature:466345-466474:-1:exon
so has part: feature:465942-466064:-1:exon
so has part: feature:453735-453832:-1:exon
so has part: feature:435081-435136:-1:exon
so has part: feature:433674-433733:-1:exon
so has part: feature:429326-429412:-1:exon

XP_015500367.1
type: Protein
SIO_000068: ncbiprotein

position:477298:-1
position: 477298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477188-477298:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:471892-471999:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468782-468878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466345-466474:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:465942-466064:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453735-453832:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:435081-435136:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:433674-433733:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:429326-429412:-1:exon

LOC107212219
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107212219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(507494..525646)
location: region:507494-525646:-1
so has part: feature:507494-525646:-1:exon
subclass of: SO_0000011

107212219
type: Gene
SIO_000068: ncbigene

position:507494:-1
position: 507494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525646:-1
position: 525646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:507494-525646:-1:exon

LOC107212219
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107212219
product: uncharacterized LOC107212219, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001524406.2
SIO_010081: LOC107212219
subclass of: SO_0000673
so part of: LOC107212219
location: complement(join(507494..509868,510578..510712,517502..517651,521122..523426,525381..525646))
location: region:507494-525646:-1
so has part: feature:525381-525646:-1:exon
so has part: feature:521122-523426:-1:exon
so has part: feature:517502-517651:-1:exon
so has part: feature:510578-510712:-1:exon
so has part: feature:507494-509868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:525381-525646:-1:exon

position:525381:-1
position: 525381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:521122-523426:-1:exon

position:521122:-1
position: 521122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523426:-1
position: 523426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517502-517651:-1:exon

position:517502:-1
position: 517502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517651:-1
position: 517651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:510578-510712:-1:exon

position:510578:-1
position: 510578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510712:-1
position: 510712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:507494-509868:-1:exon

position:509868:-1
position: 509868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107212219
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107212219
product: uncharacterized LOC107212219, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002002323.2
SIO_010081: LOC107212219
subclass of: SO_0000673
so part of: LOC107212219
location: complement(join(507494..509868,510578..510712,517502..517651,521122..521356,525381..525608))
location: region:507494-525608:-1
so has part: feature:525381-525608:-1:exon
so has part: feature:521122-521356:-1:exon
so has part: feature:517502-517651:-1:exon
so has part: feature:510578-510712:-1:exon
so has part: feature:507494-509868:-1:exon

position:525608:-1
position: 525608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525381-525608:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521122-521356:-1:exon

position:521356:-1
position: 521356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517502-517651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:510578-510712:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507494-509868:-1:exon

LOC107212219
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107212219
product: uncharacterized LOC107212219, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002002324.2
SIO_010081: LOC107212219
subclass of: SO_0000673
so part of: LOC107212219
location: complement(join(507494..509868,510578..510712,517502..517651,521122..521295,525381..525603))
location: region:507494-525603:-1
so has part: feature:525381-525603:-1:exon
so has part: feature:521122-521295:-1:exon
so has part: feature:517502-517651:-1:exon
so has part: feature:510578-510712:-1:exon
so has part: feature:507494-509868:-1:exon

position:525603:-1
position: 525603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:525381-525603:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:521122-521295:-1:exon

position:521295:-1
position: 521295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517502-517651:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:510578-510712:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507494-509868:-1:exon

LOC107211911
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107211911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(590742..592864)
location: region:590742-592864:-1
so has part: feature:590742-592864:-1:exon
subclass of: SO_0000011

107211911
type: Gene
SIO_000068: ncbigene

position:590742:-1
position: 590742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592864:-1
position: 592864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590742-592864:-1:exon

LOC107211911
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107211911
product: uncharacterized LOC107211911
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004499687.1
SIO_010081: LOC107211911
subclass of: SO_0000673
so part of: LOC107211911
location: complement(join(590742..591172,591303..591968,592800..592864))
location: region:590742-592864:-1
so has part: feature:592800-592864:-1:exon
so has part: feature:591303-591968:-1:exon
so has part: feature:590742-591172:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:592800-592864:-1:exon

position:592800:-1
position: 592800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:591303-591968:-1:exon

position:591303:-1
position: 591303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591968:-1
position: 591968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590742-591172:-1:exon

position:591172:-1
position: 591172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PBX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(633250..737044)
location: region:633250-737044:-1
so has part: feature:633250-737044:-1:exon
subclass of: SO_0000010

107211990
type: Gene
SIO_000068: ncbigene

position:633250:-1
position: 633250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737044:-1
position: 737044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633250-737044:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PBX3
product: PBX homeobox 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015644653.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(633250..637218,639924..640013,640849..640961,642162..642327,648647..648782,650554..650744,654693..654934,735018..735091,736870..737038))
location: region:633250-737038:-1
so has part: feature:736870-737038:-1:exon
so has part: feature:735018-735091:-1:exon
so has part: feature:654693-654934:-1:exon
so has part: feature:650554-650744:-1:exon
so has part: feature:648647-648782:-1:exon
so has part: feature:642162-642327:-1:exon
so has part: feature:640849-640961:-1:exon
so has part: feature:639924-640013:-1:exon
so has part: feature:633250-637218:-1:exon

position:737038:-1
position: 737038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736870-737038:-1:exon

position:736870:-1
position: 736870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:735018-735091:-1:exon

position:735018:-1
position: 735018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735091:-1
position: 735091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:654693-654934:-1:exon

position:654693:-1
position: 654693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654934:-1
position: 654934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:650554-650744:-1:exon

position:650554:-1
position: 650554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:650744:-1
position: 650744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:648647-648782:-1:exon

position:648647:-1
position: 648647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648782:-1
position: 648782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:642162-642327:-1:exon

position:642162:-1
position: 642162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:642327:-1
position: 642327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:640849-640961:-1:exon

position:640849:-1
position: 640849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640961:-1
position: 640961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:639924-640013:-1:exon

position:639924:-1
position: 639924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:640013:-1
position: 640013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:633250-637218:-1:exon

position:637218:-1
position: 637218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PBX3
product: PBX homeobox 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 16 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_015644654.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(633250..637218,639924..640013,642162..642327,648647..648782,650554..650744,654693..654934,735018..735091,735943..737038))
location: region:633250-737038:-1
so has part: feature:735943-737038:-1:exon
so has part: feature:735018-735091:-1:exon
so has part: feature:654693-654934:-1:exon
so has part: feature:650554-650744:-1:exon
so has part: feature:648647-648782:-1:exon
so has part: feature:642162-642327:-1:exon
so has part: feature:639924-640013:-1:exon
so has part: feature:633250-637218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:735943-737038:-1:exon

position:735943:-1
position: 735943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:735018-735091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654693-654934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650554-650744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648647-648782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642162-642327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639924-640013:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:633250-637218:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PBX3
product: PBX homeobox 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019008449.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(633250..637218,639924..640013,640849..640961,642162..642327,648647..648782,650554..650744,654693..654934,735018..735091,737005..737034))
location: region:633250-737034:-1
so has part: feature:737005-737034:-1:exon
so has part: feature:735018-735091:-1:exon
so has part: feature:654693-654934:-1:exon
so has part: feature:650554-650744:-1:exon
so has part: feature:648647-648782:-1:exon
so has part: feature:642162-642327:-1:exon
so has part: feature:640849-640961:-1:exon
so has part: feature:639924-640013:-1:exon
so has part: feature:633250-637218:-1:exon

position:737034:-1
position: 737034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737005-737034:-1:exon

position:737005:-1
position: 737005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:735018-735091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654693-654934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650554-650744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648647-648782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642162-642327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:640849-640961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:639924-640013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:633250-637218:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PBX3
product: PBX homeobox 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 20 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_015644652.2
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(635659..637218,639924..640013,640849..640961,642162..642327,648647..648782,650554..650744,654693..654934,735018..735091,735943..737044))
location: region:635659-737044:-1
so has part: feature:735943-737044:-1:exon
so has part: feature:735018-735091:-1:exon
so has part: feature:654693-654934:-1:exon
so has part: feature:650554-650744:-1:exon
so has part: feature:648647-648782:-1:exon
so has part: feature:642162-642327:-1:exon
so has part: feature:640849-640961:-1:exon
so has part: feature:639924-640013:-1:exon
so has part: feature:635659-637218:-1:exon

position:635659:-1
position: 635659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735943-737044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:735018-735091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654693-654934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650554-650744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648647-648782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642162-642327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:640849-640961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:639924-640013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:635659-637218:-1:exon

PBX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PBX3
product: PBX homeobox 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 ESTs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033518392.1
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(635659..637218,639924..640013,640849..640961,642162..642327,648647..648782,650554..650744,654693..654934,735018..735091,735943..736543,736870..737038))
location: region:635659-737038:-1
so has part: feature:736870-737038:-1:exon
so has part: feature:735943-736543:-1:exon
so has part: feature:735018-735091:-1:exon
so has part: feature:654693-654934:-1:exon
so has part: feature:650554-650744:-1:exon
so has part: feature:648647-648782:-1:exon
so has part: feature:642162-642327:-1:exon
so has part: feature:640849-640961:-1:exon
so has part: feature:639924-640013:-1:exon
so has part: feature:635659-637218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:736870-737038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:735943-736543:-1:exon

position:736543:-1
position: 736543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:735018-735091:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654693-654934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:650554-650744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:648647-648782:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:642162-642327:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:640849-640961:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:639924-640013:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:635659-637218:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X1
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(637126..637218,639924..640013,640849..640961,642162..642327,648647..648782,650554..650744,654693..654934,735018..735091,735943..736139))
location: region:637126-736139:-1
so has part: feature:735943-736139:-1:exon
so has part: feature:735018-735091:-1:exon
so has part: feature:654693-654934:-1:exon
so has part: feature:650554-650744:-1:exon
so has part: feature:648647-648782:-1:exon
so has part: feature:642162-642327:-1:exon
so has part: feature:640849-640961:-1:exon
so has part: feature:639924-640013:-1:exon
so has part: feature:637126-637218:-1:exon

XP_033374283.1
type: Protein
SIO_000068: ncbiprotein

position:637126:-1
position: 637126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736139:-1
position: 736139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735943-736139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:735018-735091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654693-654934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650554-650744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648647-648782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642162-642327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:640849-640961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:639924-640013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637126-637218:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X1
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(637126..637218,639924..640013,640849..640961,642162..642327,648647..648782,650554..650744,654693..654934,735018..735091,735943..736139))
location: region:637126-736139:-1
so has part: feature:735943-736139:-1:exon
so has part: feature:735018-735091:-1:exon
so has part: feature:654693-654934:-1:exon
so has part: feature:650554-650744:-1:exon
so has part: feature:648647-648782:-1:exon
so has part: feature:642162-642327:-1:exon
so has part: feature:640849-640961:-1:exon
so has part: feature:639924-640013:-1:exon
so has part: feature:637126-637218:-1:exon

XP_015500138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:735943-736139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:735018-735091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654693-654934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650554-650744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648647-648782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642162-642327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:640849-640961:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:639924-640013:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:637126-637218:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X2
translation: MKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(637126..637218,639924..640013,640849..640961,642162..642327,648647..648782,650554..650744,654693..654934,735018..735066))
location: region:637126-735066:-1
so has part: feature:735018-735066:-1:exon
so has part: feature:654693-654934:-1:exon
so has part: feature:650554-650744:-1:exon
so has part: feature:648647-648782:-1:exon
so has part: feature:642162-642327:-1:exon
so has part: feature:640849-640961:-1:exon
so has part: feature:639924-640013:-1:exon
so has part: feature:637126-637218:-1:exon

XP_018863994.1
type: Protein
SIO_000068: ncbiprotein

position:735066:-1
position: 735066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735018-735066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654693-654934:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:650554-650744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648647-648782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:642162-642327:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:640849-640961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639924-640013:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637126-637218:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X2
translation: MKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVINQTGGYNDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(637126..637218,639924..640013,640849..640961,642162..642327,648647..648782,650554..650744,654693..654934,735018..735066))
location: region:637126-735066:-1
so has part: feature:735018-735066:-1:exon
so has part: feature:654693-654934:-1:exon
so has part: feature:650554-650744:-1:exon
so has part: feature:648647-648782:-1:exon
so has part: feature:642162-642327:-1:exon
so has part: feature:640849-640961:-1:exon
so has part: feature:639924-640013:-1:exon
so has part: feature:637126-637218:-1:exon

XP_015500139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:735018-735066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654693-654934:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:650554-650744:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648647-648782:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:642162-642327:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:640849-640961:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639924-640013:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:637126-637218:-1:exon

PBX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PBX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-B-cell leukemia transcription factor 3 isoform X3
translation: MDDQSRMLQTLAGVNLAGHSVQGGMALPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGGGSAAAAAAAAASGGSSDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAAVQNNQTNSPTTPNSGGYPASCYQSDGRIQ
SIO_010081: PBX3
subclass of: SO_0000673
so part of: PBX3
location: complement(join(639967..640013,642162..642327,648647..648782,650554..650744,654693..654934,735018..735091,735943..736139))
location: region:639967-736139:-1
so has part: feature:735943-736139:-1:exon
so has part: feature:735018-735091:-1:exon
so has part: feature:654693-654934:-1:exon
so has part: feature:650554-650744:-1:exon
so has part: feature:648647-648782:-1:exon
so has part: feature:642162-642327:-1:exon
so has part: feature:639967-640013:-1:exon

XP_015500140.1
type: Protein
SIO_000068: ncbiprotein

position:639967:-1
position: 639967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735943-736139:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:735018-735091:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654693-654934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:650554-650744:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648647-648782:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:642162-642327:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639967-640013:-1:exon

MAPKAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 749504..822046
location: region:749504-822046:1
so has part: feature:749504-822046:1:exon
subclass of: SO_0000010

107211988
type: Gene
SIO_000068: ncbigene

position:749504:1
position: 749504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822046:1
position: 822046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749504-822046:1:exon

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_015644649.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(749504..749827,752880..752969,755812..755960,774387..774559,778848..779024,786203..786312,800914..801021,805664..805804,810241..810378,819588..819685,821442..822046)
location: region:749504-822046:1
so has part: feature:749504-749827:1:exon
so has part: feature:752880-752969:1:exon
so has part: feature:755812-755960:1:exon
so has part: feature:774387-774559:1:exon
so has part: feature:778848-779024:1:exon
so has part: feature:786203-786312:1:exon
so has part: feature:800914-801021:1:exon
so has part: feature:805664-805804:1:exon
so has part: feature:810241-810378:1:exon
so has part: feature:819588-819685:1:exon
so has part: feature:821442-822046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749504-749827:1:exon

position:749827:1
position: 749827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752880-752969:1:exon

position:752880:1
position: 752880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:752969:1
position: 752969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:755812-755960:1:exon

position:755812:1
position: 755812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755960:1
position: 755960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:774387-774559:1:exon

position:774387:1
position: 774387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774559:1
position: 774559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:778848-779024:1:exon

position:778848:1
position: 778848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779024:1
position: 779024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:786203-786312:1:exon

position:786203:1
position: 786203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786312:1
position: 786312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:800914-801021:1:exon

position:800914:1
position: 800914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801021:1
position: 801021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:805664-805804:1:exon

position:805664:1
position: 805664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805804:1
position: 805804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:810241-810378:1:exon

position:810241:1
position: 810241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810378:1
position: 810378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:819588-819685:1:exon

position:819588:1
position: 819588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819685:1
position: 819685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:821442-822046:1:exon

position:821442:1
position: 821442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_033518377.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(749504..749827,752880..752969,755812..755960,774387..774559,778848..779024,786203..786312,800914..801021,805664..805804,819588..819685,821442..822046)
location: region:749504-822046:1
so has part: feature:749504-749827:1:exon
so has part: feature:752880-752969:1:exon
so has part: feature:755812-755960:1:exon
so has part: feature:774387-774559:1:exon
so has part: feature:778848-779024:1:exon
so has part: feature:786203-786312:1:exon
so has part: feature:800914-801021:1:exon
so has part: feature:805664-805804:1:exon
so has part: feature:819588-819685:1:exon
so has part: feature:821442-822046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749504-749827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752880-752969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755812-755960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774387-774559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778848-779024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786203-786312:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800914-801021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805664-805804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819588-819685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:821442-822046:1:exon

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_015644650.1
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(749504..749827,752880..752969,755812..755960,774387..774559,778848..779024,786203..786312,805664..805804,810241..810378,819588..819685,821442..822046)
location: region:749504-822046:1
so has part: feature:749504-749827:1:exon
so has part: feature:752880-752969:1:exon
so has part: feature:755812-755960:1:exon
so has part: feature:774387-774559:1:exon
so has part: feature:778848-779024:1:exon
so has part: feature:786203-786312:1:exon
so has part: feature:805664-805804:1:exon
so has part: feature:810241-810378:1:exon
so has part: feature:819588-819685:1:exon
so has part: feature:821442-822046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749504-749827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752880-752969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755812-755960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774387-774559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778848-779024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786203-786312:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805664-805804:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810241-810378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819588-819685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:821442-822046:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X1
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSAHGDNGSEPQGSNGETQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVKSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRINAAHGFSLIQVDSMKVTMKDILQKALKRRKGSQRGSGPQYRLEKQSEPNVPVDLDCTLESQSTLEFCLVRENSSRGEEVSEEDPQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(749569..749827,752880..752969,755812..755960,774387..774559,778848..779024,786203..786312,800914..801021,805664..805804,810241..810378,819588..819685,821442..821567)
location: region:749569-821567:1
so has part: feature:749569-749827:1:exon
so has part: feature:752880-752969:1:exon
so has part: feature:755812-755960:1:exon
so has part: feature:774387-774559:1:exon
so has part: feature:778848-779024:1:exon
so has part: feature:786203-786312:1:exon
so has part: feature:800914-801021:1:exon
so has part: feature:805664-805804:1:exon
so has part: feature:810241-810378:1:exon
so has part: feature:819588-819685:1:exon
so has part: feature:821442-821567:1:exon

XP_015500135.1
type: Protein
SIO_000068: ncbiprotein

position:749569:1
position: 749569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821567:1
position: 821567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749569-749827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752880-752969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755812-755960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774387-774559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778848-779024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786203-786312:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800914-801021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805664-805804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:810241-810378:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819588-819685:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:821442-821567:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X3
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSAHGDNGSEPQGSNGETQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVKSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRINAAHGFSLIQVDSMKVTMKDILQKALKRRKGSQRGSGPQYRLEKQSEPNVPVDLDCTLESQSTLEFCLVRENSSRGEEVSEEDPQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(749569..749827,752880..752969,755812..755960,774387..774559,778848..779024,786203..786312,800914..801021,805664..805804,819588..819685,821442..821567)
location: region:749569-821567:1
so has part: feature:749569-749827:1:exon
so has part: feature:752880-752969:1:exon
so has part: feature:755812-755960:1:exon
so has part: feature:774387-774559:1:exon
so has part: feature:778848-779024:1:exon
so has part: feature:786203-786312:1:exon
so has part: feature:800914-801021:1:exon
so has part: feature:805664-805804:1:exon
so has part: feature:819588-819685:1:exon
so has part: feature:821442-821567:1:exon

XP_033374268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749569-749827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752880-752969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755812-755960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774387-774559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778848-779024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786203-786312:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800914-801021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805664-805804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819588-819685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:821442-821567:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X2
translation: MAFLDNPTIILAHIRQSHVTSDDTGMCEMVLIDHDVDLEKFNPSSAHGDNGSEPQGSNGETQGYVYSQSVDITSSWDFGIRRRSNTAQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVKSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRINAAHGFSLIQVDSMKVTMKDILQKALKRRKGSQRGSGSRGEEVSEEDPQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(749569..749827,752880..752969,755812..755960,774387..774559,778848..779024,786203..786312,805664..805804,810241..810378,819588..819685,821442..821567)
location: region:749569-821567:1
so has part: feature:749569-749827:1:exon
so has part: feature:752880-752969:1:exon
so has part: feature:755812-755960:1:exon
so has part: feature:774387-774559:1:exon
so has part: feature:778848-779024:1:exon
so has part: feature:786203-786312:1:exon
so has part: feature:805664-805804:1:exon
so has part: feature:810241-810378:1:exon
so has part: feature:819588-819685:1:exon
so has part: feature:821442-821567:1:exon

XP_015500136.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:749569-749827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752880-752969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755812-755960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774387-774559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778848-779024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786203-786312:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805664-805804:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:810241-810378:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819588-819685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:821442-821567:1:exon

MAPKAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MAPKAP1
product: MAPK associated protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_015644651.2
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(749724..749827,752885..752969,755812..755960,774387..774559,778848..779024,786203..786312,800914..801021,805664..805804,810241..810378,819588..819685,821442..822046)
location: region:749724-822046:1
so has part: feature:749724-749827:1:exon
so has part: feature:752885-752969:1:exon
so has part: feature:755812-755960:1:exon
so has part: feature:774387-774559:1:exon
so has part: feature:778848-779024:1:exon
so has part: feature:786203-786312:1:exon
so has part: feature:800914-801021:1:exon
so has part: feature:805664-805804:1:exon
so has part: feature:810241-810378:1:exon
so has part: feature:819588-819685:1:exon
so has part: feature:821442-822046:1:exon

position:749724:1
position: 749724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749724-749827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752885-752969:1:exon

position:752885:1
position: 752885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:755812-755960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774387-774559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778848-779024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786203-786312:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800914-801021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805664-805804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:810241-810378:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819588-819685:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:821442-822046:1:exon

MAPKAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MAPKAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: target of rapamycin complex 2 subunit MAPKAP1 isoform X4
translation: MGRLRAMYIPNQSILPQAGTLESEDDQTQRLERLRKERQNQIKCKNVQWKDRNTSCSAEELSSLFEKKNFRVKSPCSGKQSILSVRLEQCPLQLNNPFNEYSKFDGKGHVGTTATKKIDVYLPLHTSQDKLQPMTVVTIANAKVHDLIGLICWQYTSEGREPKLNDNVSAYCLHIAEDDGEVDTDFPPLDSNEPIHKFGFSTLALVEKYSSPGLAAKQSLFVRINAAHGFSLIQVDSMKVTMKDILQKALKRRKGSQRGSGPQYRLEKQSEPNVPVDLDCTLESQSTLEFCLVRENSSRGEEVSEEDPQIDIATVQDMLSSHHYKSFKVSMIHRLRFTTDVQLGISGDKVEIDPVTNQKASTKFWIKQKPISIDSELLCACDLAEEKSPSHAIFKLTYLSNHDYKHLYFESDAATVNEIVLKVNYILESRASTARADYFAQKQRKLSRRTSFSFQKEKKSGQQ
SIO_010081: MAPKAP1
subclass of: SO_0000673
so part of: MAPKAP1
location: join(749741..749827,752885..752969,755812..755960,774387..774559,778848..779024,786203..786312,800914..801021,805664..805804,810241..810378,819588..819685,821442..821567)
location: region:749741-821567:1
so has part: feature:749741-749827:1:exon
so has part: feature:752885-752969:1:exon
so has part: feature:755812-755960:1:exon
so has part: feature:774387-774559:1:exon
so has part: feature:778848-779024:1:exon
so has part: feature:786203-786312:1:exon
so has part: feature:800914-801021:1:exon
so has part: feature:805664-805804:1:exon
so has part: feature:810241-810378:1:exon
so has part: feature:819588-819685:1:exon
so has part: feature:821442-821567:1:exon

XP_015500137.2
type: Protein
SIO_000068: ncbiprotein

position:749741:1
position: 749741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749741-749827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752885-752969:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:755812-755960:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:774387-774559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:778848-779024:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:786203-786312:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:800914-801021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805664-805804:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:810241-810378:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819588-819685:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:821442-821567:1:exon

GAPVD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(838972..864231)
location: region:838972-864231:-1
so has part: feature:838972-864231:-1:exon
subclass of: SO_0000010

107212049
type: Gene
SIO_000068: ncbigene

position:838972:-1
position: 838972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864231:-1
position: 864231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838972-864231:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015644827.3
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(838972..839255,839950..840147,840514..840586,841141..841354,842037..842224,842522..842681,843296..843405,843805..843934,844414..844536,845186..845266,845643..845730,846245..846618,846752..846829,847275..847394,847975..848109,848695..848835,849144..849317,850111..850236,850994..851123,851898..852058,852870..852950,853832..854021,854136..854270,855403..855489,856670..857513,857869..858083,864012..864060,864178..864231))
location: region:838972-864231:-1
so has part: feature:864178-864231:-1:exon
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urn:…
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urn:…
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urn:…
SIO_000300: 9
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SIO_000300: 10
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urn:…
SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 13
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SIO_000300: 14
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SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 18
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SIO_000300: 19
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SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 24
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SIO_000300: 25
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SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 28
SIO_000628: feature:838972-839255:-1:exon

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GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_015644831.2
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(838972..839255,839950..840147,840514..840586,841141..841354,842037..842224,842522..842681,843296..843405,843805..843934,844414..844536,845186..845266,845643..845730,846245..846618,846752..846829,847275..847394,847975..848109,848695..848835,849144..849317,850111..850236,851057..851123,851898..852058,853832..854021,854136..854270,855403..855489,856670..857513,857869..858083,864012..864169))
location: region:838972-864169:-1
so has part: feature:864012-864169:-1:exon
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position:864169:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 4
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SIO_000628: feature:851898-852058:-1:exon

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SIO_000300: 8
SIO_000628: feature:851057-851123:-1:exon

position:851057:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:850111-850236:-1:exon

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SIO_000300: 10
SIO_000628: feature:849144-849317:-1:exon

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SIO_000300: 11
SIO_000628: feature:848695-848835:-1:exon

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SIO_000300: 12
SIO_000628: feature:847975-848109:-1:exon

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SIO_000300: 13
SIO_000628: feature:847275-847394:-1:exon

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SIO_000300: 15
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SIO_000628: feature:845643-845730:-1:exon

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SIO_000628: feature:845186-845266:-1:exon

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SIO_000628: feature:844414-844536:-1:exon

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SIO_000300: 19
SIO_000628: feature:843805-843934:-1:exon

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SIO_000300: 20
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SIO_000300: 21
SIO_000628: feature:842522-842681:-1:exon

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SIO_000300: 22
SIO_000628: feature:842037-842224:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:841141-841354:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:840514-840586:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:839950-840147:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:838972-839255:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 21 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_015644829.2
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(838972..839255,839950..840147,840514..840586,841141..841354,842037..842224,842522..842681,843296..843405,843805..843934,844414..844536,845186..845266,845643..845730,846245..846618,846752..846829,847275..847394,847975..848109,848695..848835,849144..849317,850111..850236,850994..851123,851898..852058,853832..854021,854136..854270,855403..855489,856670..857513,857869..858083,864012..864169))
location: region:838972-864169:-1
so has part: feature:864012-864169:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:864012-864169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857869-858083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:850994-851123:-1:exon

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SIO_000300: 9
SIO_000628: feature:850111-850236:-1:exon

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SIO_000300: 10
SIO_000628: feature:849144-849317:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848695-848835:-1:exon

urn:…
SIO_000300: 12
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SIO_000300: 13
SIO_000628: feature:847275-847394:-1:exon

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SIO_000300: 14
SIO_000628: feature:846752-846829:-1:exon

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SIO_000300: 15
SIO_000628: feature:846245-846618:-1:exon

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SIO_000300: 16
SIO_000628: feature:845643-845730:-1:exon

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SIO_000300: 17
SIO_000628: feature:845186-845266:-1:exon

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SIO_000300: 18
SIO_000628: feature:844414-844536:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843805-843934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843296-843405:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:842522-842681:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:842037-842224:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:841141-841354:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:840514-840586:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:839950-840147:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:838972-839255:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 20 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015644828.3
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(838972..839255,839950..840147,840514..840586,841141..841354,842037..842224,842522..842681,843296..843405,843805..843934,844414..844536,845186..845266,845643..845730,846245..846618,846752..846829,847275..847394,847975..848109,848695..848835,849144..849317,850111..850236,851057..851123,851898..852058,852870..852950,853832..854021,854136..854270,855403..855489,856670..857513,857869..858083,864012..864169))
location: region:838972-864169:-1
so has part: feature:864012-864169:-1:exon
so has part: feature:857869-858083:-1:exon
so has part: feature:856670-857513:-1:exon
so has part: feature:855403-855489:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:864012-864169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857869-858083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854136-854270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:853832-854021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852870-852950:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:851898-852058:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:851057-851123:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:850111-850236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849144-849317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:848695-848835:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847975-848109:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:847275-847394:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:846752-846829:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:846245-846618:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845643-845730:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:845186-845266:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:844414-844536:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843805-843934:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:843296-843405:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:842522-842681:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:842037-842224:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:841141-841354:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:840514-840586:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:839950-840147:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:838972-839255:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015644830.2
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(838972..839255,839950..840147,840514..840586,841141..841354,842037..842224,842522..842681,843296..843405,843805..843934,844414..844536,845186..845266,845643..845730,846245..846618,846752..846829,847275..847394,847975..848109,849144..849317,850111..850236,850994..851123,851898..852058,852870..852950,853832..854021,854136..854270,855403..855489,856670..857513,857869..858083,864012..864169))
location: region:838972-864169:-1
so has part: feature:864012-864169:-1:exon
so has part: feature:857869-858083:-1:exon
so has part: feature:856670-857513:-1:exon
so has part: feature:855403-855489:-1:exon
so has part: feature:854136-854270:-1:exon
so has part: feature:853832-854021:-1:exon
so has part: feature:852870-852950:-1:exon
so has part: feature:851898-852058:-1:exon
so has part: feature:850994-851123:-1:exon
so has part: feature:850111-850236:-1:exon
so has part: feature:849144-849317:-1:exon
so has part: feature:847975-848109:-1:exon
so has part: feature:847275-847394:-1:exon
so has part: feature:846752-846829:-1:exon
so has part: feature:846245-846618:-1:exon
so has part: feature:845643-845730:-1:exon
so has part: feature:845186-845266:-1:exon
so has part: feature:844414-844536:-1:exon
so has part: feature:843805-843934:-1:exon
so has part: feature:843296-843405:-1:exon
so has part: feature:842522-842681:-1:exon
so has part: feature:842037-842224:-1:exon
so has part: feature:841141-841354:-1:exon
so has part: feature:840514-840586:-1:exon
so has part: feature:839950-840147:-1:exon
so has part: feature:838972-839255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:864012-864169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857869-858083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854136-854270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:853832-854021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:852870-852950:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:851898-852058:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:850994-851123:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:850111-850236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:849144-849317:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847975-848109:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847275-847394:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846752-846829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:846245-846618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845643-845730:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845186-845266:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:844414-844536:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843805-843934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843296-843405:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:842522-842681:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:842037-842224:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:841141-841354:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:840514-840586:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:839950-840147:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:838972-839255:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X5
translation: MVKLDIHTLAHHLKQERLYVTSEKQLIQRLNADVLKTAERLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPAQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGFMRNVMSSDQLKEDRMALENLLANLPQNKQGKSSSLEMTPYNTPQLSPATTPANKKNRLPIATRSRSRSNMVMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKLHGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGSEARLPNFGCHALIPTDLEAFKQRHSYPERLVRSRSSDIVSSARRPMSDPGWNRRAGNEERELPMASSSTGAAVLVATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDTVPDRYAMLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYDSAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCSADSVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(839115..839255,839950..840147,840514..840586,841141..841354,842037..842224,842522..842681,843296..843405,843805..843934,844414..844536,845186..845266,845643..845730,846245..846618,846752..846829,847275..847394,847975..848109,848695..848835,849144..849317,850111..850236,851057..851123,851898..852058,853832..854021,854136..854270,855403..855489,856670..857513,857869..858053))
location: region:839115-858053:-1
so has part: feature:857869-858053:-1:exon
so has part: feature:856670-857513:-1:exon
so has part: feature:855403-855489:-1:exon
so has part: feature:854136-854270:-1:exon
so has part: feature:853832-854021:-1:exon
so has part: feature:851898-852058:-1:exon
so has part: feature:851057-851123:-1:exon
so has part: feature:850111-850236:-1:exon
so has part: feature:849144-849317:-1:exon
so has part: feature:848695-848835:-1:exon
so has part: feature:847975-848109:-1:exon
so has part: feature:847275-847394:-1:exon
so has part: feature:846752-846829:-1:exon
so has part: feature:846245-846618:-1:exon
so has part: feature:845643-845730:-1:exon
so has part: feature:845186-845266:-1:exon
so has part: feature:844414-844536:-1:exon
so has part: feature:843805-843934:-1:exon
so has part: feature:843296-843405:-1:exon
so has part: feature:842522-842681:-1:exon
so has part: feature:842037-842224:-1:exon
so has part: feature:841141-841354:-1:exon
so has part: feature:840514-840586:-1:exon
so has part: feature:839950-840147:-1:exon
so has part: feature:839115-839255:-1:exon

XP_015500317.1
type: Protein
SIO_000068: ncbiprotein

position:839115:-1
position: 839115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858053:-1
position: 858053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857869-858053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854136-854270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:853832-854021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851898-852058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:851057-851123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850111-850236:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849144-849317:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848695-848835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847975-848109:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847275-847394:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846752-846829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846245-846618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845643-845730:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845186-845266:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:844414-844536:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:843805-843934:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843296-843405:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:842522-842681:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:842037-842224:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:841141-841354:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:840514-840586:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:839950-840147:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:839115-839255:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X3
translation: MVKLDIHTLAHHLKQERLYVTSEKQLIQRLNADVLKTAERLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPAQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGFMRNVMSSDQLKEDRMALENLLANLPQNKQGKSSSLEMTPYNTPQLSPATTPANKKNRLPIATRSRSRSNMVMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGSEARLPNFGCHALIPTDLEAFKQRHSYPERLVRSRSSDIVSSARRPMSDPGWNRRAGNEERELPMASSSTGAAVLVATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDTVPDRYAMLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYDSAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCSADSVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(839115..839255,839950..840147,840514..840586,841141..841354,842037..842224,842522..842681,843296..843405,843805..843934,844414..844536,845186..845266,845643..845730,846245..846618,846752..846829,847275..847394,847975..848109,848695..848835,849144..849317,850111..850236,850994..851123,851898..852058,853832..854021,854136..854270,855403..855489,856670..857513,857869..858053))
location: region:839115-858053:-1
so has part: feature:857869-858053:-1:exon
so has part: feature:856670-857513:-1:exon
so has part: feature:855403-855489:-1:exon
so has part: feature:854136-854270:-1:exon
so has part: feature:853832-854021:-1:exon
so has part: feature:851898-852058:-1:exon
so has part: feature:850994-851123:-1:exon
so has part: feature:850111-850236:-1:exon
so has part: feature:849144-849317:-1:exon
so has part: feature:848695-848835:-1:exon
so has part: feature:847975-848109:-1:exon
so has part: feature:847275-847394:-1:exon
so has part: feature:846752-846829:-1:exon
so has part: feature:846245-846618:-1:exon
so has part: feature:845643-845730:-1:exon
so has part: feature:845186-845266:-1:exon
so has part: feature:844414-844536:-1:exon
so has part: feature:843805-843934:-1:exon
so has part: feature:843296-843405:-1:exon
so has part: feature:842522-842681:-1:exon
so has part: feature:842037-842224:-1:exon
so has part: feature:841141-841354:-1:exon
so has part: feature:840514-840586:-1:exon
so has part: feature:839950-840147:-1:exon
so has part: feature:839115-839255:-1:exon

XP_015500315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:857869-858053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854136-854270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:853832-854021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851898-852058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850994-851123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850111-850236:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:849144-849317:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:848695-848835:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847975-848109:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847275-847394:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846752-846829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846245-846618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845643-845730:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845186-845266:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:844414-844536:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:843805-843934:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843296-843405:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:842522-842681:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:842037-842224:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:841141-841354:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:840514-840586:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:839950-840147:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:839115-839255:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X2
translation: MVKLDIHTLAHHLKQERLYVTSEKQLIQRLNADVLKTAERLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPAQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGFMRNVMSSDQLKEDRMALENLLANLPQNKQGKSSSLEMTPYNTPQLSPATTPANKKNRLPIGQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNMVMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKLHGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGSEARLPNFGCHALIPTDLEAFKQRHSYPERLVRSRSSDIVSSARRPMSDPGWNRRAGNEERELPMASSSTGAAVLVATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDTVPDRYAMLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYDSAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCSADSVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(839115..839255,839950..840147,840514..840586,841141..841354,842037..842224,842522..842681,843296..843405,843805..843934,844414..844536,845186..845266,845643..845730,846245..846618,846752..846829,847275..847394,847975..848109,848695..848835,849144..849317,850111..850236,851057..851123,851898..852058,852870..852950,853832..854021,854136..854270,855403..855489,856670..857513,857869..858053))
location: region:839115-858053:-1
so has part: feature:857869-858053:-1:exon
so has part: feature:856670-857513:-1:exon
so has part: feature:855403-855489:-1:exon
so has part: feature:854136-854270:-1:exon
so has part: feature:853832-854021:-1:exon
so has part: feature:852870-852950:-1:exon
so has part: feature:851898-852058:-1:exon
so has part: feature:851057-851123:-1:exon
so has part: feature:850111-850236:-1:exon
so has part: feature:849144-849317:-1:exon
so has part: feature:848695-848835:-1:exon
so has part: feature:847975-848109:-1:exon
so has part: feature:847275-847394:-1:exon
so has part: feature:846752-846829:-1:exon
so has part: feature:846245-846618:-1:exon
so has part: feature:845643-845730:-1:exon
so has part: feature:845186-845266:-1:exon
so has part: feature:844414-844536:-1:exon
so has part: feature:843805-843934:-1:exon
so has part: feature:843296-843405:-1:exon
so has part: feature:842522-842681:-1:exon
so has part: feature:842037-842224:-1:exon
so has part: feature:841141-841354:-1:exon
so has part: feature:840514-840586:-1:exon
so has part: feature:839950-840147:-1:exon
so has part: feature:839115-839255:-1:exon

XP_015500314.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:857869-858053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854136-854270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:853832-854021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:852870-852950:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:851898-852058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:851057-851123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:850111-850236:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849144-849317:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848695-848835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847975-848109:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847275-847394:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846752-846829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:846245-846618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845643-845730:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845186-845266:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:844414-844536:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843805-843934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843296-843405:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:842522-842681:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:842037-842224:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:841141-841354:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:840514-840586:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:839950-840147:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:839115-839255:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X4
translation: MVKLDIHTLAHHLKQERLYVTSEKQLIQRLNADVLKTAERLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPAQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGFMRNVMSSDQLKEDRMALENLLANLPQNKQGKSSSLEMTPYNTPQLSPATTPANKKNRLPIGQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNMVMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGSEARLPNFGCHALIPTDLEAFKQRHSYPERLVRSRSSDIVSSARRPMSDPGWNRRAGNEERELPMASSSTGAAVLVATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDTVPDRYAMLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYDSAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCSADSVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(839115..839255,839950..840147,840514..840586,841141..841354,842037..842224,842522..842681,843296..843405,843805..843934,844414..844536,845186..845266,845643..845730,846245..846618,846752..846829,847275..847394,847975..848109,849144..849317,850111..850236,850994..851123,851898..852058,852870..852950,853832..854021,854136..854270,855403..855489,856670..857513,857869..858053))
location: region:839115-858053:-1
so has part: feature:857869-858053:-1:exon
so has part: feature:856670-857513:-1:exon
so has part: feature:855403-855489:-1:exon
so has part: feature:854136-854270:-1:exon
so has part: feature:853832-854021:-1:exon
so has part: feature:852870-852950:-1:exon
so has part: feature:851898-852058:-1:exon
so has part: feature:850994-851123:-1:exon
so has part: feature:850111-850236:-1:exon
so has part: feature:849144-849317:-1:exon
so has part: feature:847975-848109:-1:exon
so has part: feature:847275-847394:-1:exon
so has part: feature:846752-846829:-1:exon
so has part: feature:846245-846618:-1:exon
so has part: feature:845643-845730:-1:exon
so has part: feature:845186-845266:-1:exon
so has part: feature:844414-844536:-1:exon
so has part: feature:843805-843934:-1:exon
so has part: feature:843296-843405:-1:exon
so has part: feature:842522-842681:-1:exon
so has part: feature:842037-842224:-1:exon
so has part: feature:841141-841354:-1:exon
so has part: feature:840514-840586:-1:exon
so has part: feature:839950-840147:-1:exon
so has part: feature:839115-839255:-1:exon

XP_015500316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:857869-858053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854136-854270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:853832-854021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:852870-852950:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:851898-852058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850994-851123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:850111-850236:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849144-849317:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847975-848109:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847275-847394:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:846752-846829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846245-846618:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:845643-845730:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845186-845266:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:844414-844536:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:843805-843934:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843296-843405:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:842522-842681:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:842037-842224:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:841141-841354:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:840514-840586:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:839950-840147:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:839115-839255:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
translation: MVKLDIHTLAHHLKQERLYVTSEKQLIQRLNADVLKTAERLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPAQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGFMRNVMSSDQLKEDRMALENLLANLPQNKQGKSSSLEMTPYNTPQLSPATTPANKKNRLPIGQQLAAITAWDTSATNLSAHITLVTPFATRSRSRSNMVMDQHGDHEGSSQETIPEVQPEEVLVISLGTGPQITPGMMSENEVLNMQLADGGQGDVPIDENKLHGKPDKTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQATTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAAAENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELESCSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVTSPDMDETAHGASQLTSPPSQTDSLLALFDPLSSNEGVSAVVRPKVHYARPSHPPPDPPILEGAVGGSEARLPNFGCHALIPTDLEAFKQRHSYPERLVRSRSSDIVSSARRPMSDPGWNRRAGNEERELPMASSSTGAAVLVATSQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWRKRFVSAMPKAPIPFRKKEKQEKDKDDTVPDRYAMLQDDPSPRLSAQAQAAEDILDKYRNAIKRTSPSEGAIVNYDSAEAIGDGESMHDSPRDEALQNMSADDLPDSASQVAQPQGSAFSYRDAKKKLRLALCSADSVALPMLTHSTRNGLPDHTDPEDNEIVCFLKVQLAEAINLQDKNLMAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQRVLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMAQDAIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHKALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLSGEESYWWMQFTAAVEFIKTIDDRK
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(839115..839255,839950..840147,840514..840586,841141..841354,842037..842224,842522..842681,843296..843405,843805..843934,844414..844536,845186..845266,845643..845730,846245..846618,846752..846829,847275..847394,847975..848109,848695..848835,849144..849317,850111..850236,850994..851123,851898..852058,852870..852950,853832..854021,854136..854270,855403..855489,856670..857513,857869..858053))
location: region:839115-858053:-1
so has part: feature:857869-858053:-1:exon
so has part: feature:856670-857513:-1:exon
so has part: feature:855403-855489:-1:exon
so has part: feature:854136-854270:-1:exon
so has part: feature:853832-854021:-1:exon
so has part: feature:852870-852950:-1:exon
so has part: feature:851898-852058:-1:exon
so has part: feature:850994-851123:-1:exon
so has part: feature:850111-850236:-1:exon
so has part: feature:849144-849317:-1:exon
so has part: feature:848695-848835:-1:exon
so has part: feature:847975-848109:-1:exon
so has part: feature:847275-847394:-1:exon
so has part: feature:846752-846829:-1:exon
so has part: feature:846245-846618:-1:exon
so has part: feature:845643-845730:-1:exon
so has part: feature:845186-845266:-1:exon
so has part: feature:844414-844536:-1:exon
so has part: feature:843805-843934:-1:exon
so has part: feature:843296-843405:-1:exon
so has part: feature:842522-842681:-1:exon
so has part: feature:842037-842224:-1:exon
so has part: feature:841141-841354:-1:exon
so has part: feature:840514-840586:-1:exon
so has part: feature:839950-840147:-1:exon
so has part: feature:839115-839255:-1:exon

XP_015500313.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:857869-858053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854136-854270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:853832-854021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:852870-852950:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:851898-852058:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850994-851123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:850111-850236:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:849144-849317:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:848695-848835:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:847975-848109:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:847275-847394:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:846752-846829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:846245-846618:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:845643-845730:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845186-845266:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:844414-844536:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:843805-843934:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:843296-843405:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:842522-842681:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:842037-842224:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:841141-841354:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:840514-840586:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:839950-840147:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:839115-839255:-1:exon

GAPVD1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9157
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004499686.1
SIO_010081: GAPVD1
so part of: GAPVD1
location: complement(join(850126..850236,850994..851123,853832..854021,854136..854270,855403..855489,856670..857513,857869..858083,864012..864171))
location: region:850126-864171:-1
so has part: feature:864012-864171:-1:exon
so has part: feature:857869-858083:-1:exon
so has part: feature:856670-857513:-1:exon
so has part: feature:855403-855489:-1:exon
so has part: feature:854136-854270:-1:exon
so has part: feature:853832-854021:-1:exon
so has part: feature:850994-851123:-1:exon
so has part: feature:850126-850236:-1:exon

position:850126:-1
position: 850126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864171:-1
position: 864171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864012-864171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857869-858083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854136-854270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:853832-854021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:850994-851123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850126-850236:-1:exon

GAPVD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GAPVD1
product: GTPase activating protein and VPS9 domains 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_033518503.1
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(850137..850236,851057..851123,853832..854021,854136..854270,855403..855489,856670..857513,857869..858083,864012..864171))
location: region:850137-864171:-1
so has part: feature:864012-864171:-1:exon
so has part: feature:857869-858083:-1:exon
so has part: feature:856670-857513:-1:exon
so has part: feature:855403-855489:-1:exon
so has part: feature:854136-854270:-1:exon
so has part: feature:853832-854021:-1:exon
so has part: feature:851057-851123:-1:exon
so has part: feature:850137-850236:-1:exon

position:850137:-1
position: 850137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864012-864171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:857869-858083:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854136-854270:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:853832-854021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:851057-851123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:850137-850236:-1:exon

GAPVD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GAPVD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTPase-activating protein and VPS9 domain-containing protein 1 isoform X6
translation: MVKLDIHTLAHHLKQERLYVTSEKQLIQRLNADVLKTAERLYRTAWISKQQRINLDRLIITSAEASPAECCQHAKILEDTQFVDGYKQLGFQETAYGEFLNRLRENPRLIASCLVAGEKLNQDNTQSVIHTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNPRRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFSPAQQEKLFGEKGTEKFKQRVQEMVDSNEAKLVTLVNKFIGYLKQNTYCFPHSLRWIVSQMYKTLSCVDRLEVGEVRAMCTDLLLACFICPAIVNPEQYGIISDAPINEVARFNLMQVGRLLQQLAMTGSEEGDPRTKSNLAKFDKSCVAAFLDVVIDGRAVETPPMSAVNLLEGLSRTVVYMTYSQLTALVGFMRNVMSSDQLKEDRMALENLLANLPQNKQGKSSSLEMTPYNTPQLSPATTPANKKNRLPIGVKYAACRWRARRCPH
SIO_010081: GAPVD1
subclass of: SO_0000673
so part of: GAPVD1
location: complement(join(851074..851123,853832..854021,854136..854270,855403..855489,856670..857513,857869..858053))
location: region:851074-858053:-1
so has part: feature:857869-858053:-1:exon
so has part: feature:856670-857513:-1:exon
so has part: feature:855403-855489:-1:exon
so has part: feature:854136-854270:-1:exon
so has part: feature:853832-854021:-1:exon
so has part: feature:851074-851123:-1:exon

XP_033374394.1
type: Protein
SIO_000068: ncbiprotein

position:851074:-1
position: 851074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857869-858053:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:856670-857513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:855403-855489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854136-854270:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:853832-854021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:851074-851123:-1:exon

HSPA5
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: HSPA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 864936..868950
location: region:864936-868950:1
so has part: feature:864936-868950:1:exon
subclass of: SO_0000010

107212050
type: Gene
SIO_000068: ncbigene

position:864936:1
position: 864936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868950:1
position: 868950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864936-868950:1:exon

HSPA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: HSPA5
product: heat shock protein family A (Hsp70) member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 93 ESTs, 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_015644832.2
SIO_010081: HSPA5
subclass of: SO_0000673
so part of: HSPA5
location: join(864936..865046,865259..865397,865601..865832,866063..866200,866466..866578,866657..867047,867317..867554,867733..867900,868077..868948)
location: region:864936-868948:1
so has part: feature:864936-865046:1:exon
so has part: feature:865259-865397:1:exon
so has part: feature:865601-865832:1:exon
so has part: feature:866063-866200:1:exon
so has part: feature:866466-866578:1:exon
so has part: feature:866657-867047:1:exon
so has part: feature:867317-867554:1:exon
so has part: feature:867733-867900:1:exon
so has part: feature:868077-868948:1:exon

position:868948:1
position: 868948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864936-865046:1:exon

position:865046:1
position: 865046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865259-865397:1:exon

position:865259:1
position: 865259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865397:1
position: 865397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:865601-865832:1:exon

position:865601:1
position: 865601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865832:1
position: 865832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:866063-866200:1:exon

position:866063:1
position: 866063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866200:1
position: 866200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:866466-866578:1:exon

position:866466:1
position: 866466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866578:1
position: 866578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:866657-867047:1:exon

position:866657:1
position: 866657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867047:1
position: 867047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:867317-867554:1:exon

position:867317:1
position: 867317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867554:1
position: 867554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:867733-867900:1:exon

position:867733:1
position: 867733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867900:1
position: 867900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:868077-868948:1:exon

position:868077:1
position: 868077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSPA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: HSPA5
product: heat shock protein family A (Hsp70) member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 93 ESTs, 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_015644833.2
SIO_010081: HSPA5
subclass of: SO_0000673
so part of: HSPA5
location: join(864985..865062,865259..865397,865601..865832,866063..866200,866466..866578,866657..867047,867317..867554,867733..867900,868077..868948)
location: region:864985-868948:1
so has part: feature:864985-865062:1:exon
so has part: feature:865259-865397:1:exon
so has part: feature:865601-865832:1:exon
so has part: feature:866063-866200:1:exon
so has part: feature:866466-866578:1:exon
so has part: feature:866657-867047:1:exon
so has part: feature:867317-867554:1:exon
so has part: feature:867733-867900:1:exon
so has part: feature:868077-868948:1:exon

position:864985:1
position: 864985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864985-865062:1:exon

position:865062:1
position: 865062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865259-865397:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865601-865832:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866063-866200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866466-866578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866657-867047:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867317-867554:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:867733-867900:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:868077-868948:1:exon

HSPA5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: HSPA5
product: heat shock protein family A (Hsp70) member 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 117 ESTs, 69 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_033518504.1
SIO_010081: HSPA5
subclass of: SO_0000673
so part of: HSPA5
location: join(865274..865397,865601..865832,866063..866200,866466..866578,866657..867047,867317..867554,867733..867900,868077..868950)
location: region:865274-868950:1
so has part: feature:865274-865397:1:exon
so has part: feature:865601-865832:1:exon
so has part: feature:866063-866200:1:exon
so has part: feature:866466-866578:1:exon
so has part: feature:866657-867047:1:exon
so has part: feature:867317-867554:1:exon
so has part: feature:867733-867900:1:exon
so has part: feature:868077-868950:1:exon

position:865274:1
position: 865274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865274-865397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865601-865832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866063-866200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866466-866578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866657-867047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867317-867554:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867733-867900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868077-868950:1:exon

HSPA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: HSPA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum chaperone BiP
translation: MRLLLLTLLALGAVWADDEEKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVVEKKAKPHIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDARNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDGDIEDFKAQKKELEEVVQPIVSKLYGSAGPPPGEEEAAEKDEL
SIO_010081: HSPA5
subclass of: SO_0000673
so part of: HSPA5
location: join(865282..865397,865601..865832,866063..866200,866466..866578,866657..867047,867317..867554,867733..867900,868077..868636)
location: region:865282-868636:1
so has part: feature:865282-865397:1:exon
so has part: feature:865601-865832:1:exon
so has part: feature:866063-866200:1:exon
so has part: feature:866466-866578:1:exon
so has part: feature:866657-867047:1:exon
so has part: feature:867317-867554:1:exon
so has part: feature:867733-867900:1:exon
so has part: feature:868077-868636:1:exon

XP_033374395.1
type: Protein
SIO_000068: ncbiprotein

position:865282:1
position: 865282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868636:1
position: 868636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:865282-865397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865601-865832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866063-866200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866466-866578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866657-867047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867317-867554:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867733-867900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868077-868636:1:exon

HSPA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: HSPA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum chaperone BiP
translation: MRLLLLTLLALGAVWADDEEKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVVEKKAKPHIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDARNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDGDIEDFKAQKKELEEVVQPIVSKLYGSAGPPPGEEEAAEKDEL
SIO_010081: HSPA5
subclass of: SO_0000673
so part of: HSPA5
location: join(865282..865397,865601..865832,866063..866200,866466..866578,866657..867047,867317..867554,867733..867900,868077..868636)
location: region:865282-868636:1
so has part: feature:865282-865397:1:exon
so has part: feature:865601-865832:1:exon
so has part: feature:866063-866200:1:exon
so has part: feature:866466-866578:1:exon
so has part: feature:866657-867047:1:exon
so has part: feature:867317-867554:1:exon
so has part: feature:867733-867900:1:exon
so has part: feature:868077-868636:1:exon

XP_015500318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:865282-865397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865601-865832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866063-866200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866466-866578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866657-867047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867317-867554:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867733-867900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868077-868636:1:exon

HSPA5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: HSPA5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum chaperone BiP
translation: MRLLLLTLLALGAVWADDEEKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVVEKKAKPHIQVDVGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKREGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGEDFDQRVMEHFIKLYKKKTGKDVRKDNRAVQKLRREVEKAKRALSSQHQARIEIESFFEGEDFSETLTRAKFEELNMDLFRSTMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDARNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDGDIEDFKAQKKELEEVVQPIVSKLYGSAGPPPGEEEAAEKDEL
SIO_010081: HSPA5
subclass of: SO_0000673
so part of: HSPA5
location: join(865282..865397,865601..865832,866063..866200,866466..866578,866657..867047,867317..867554,867733..867900,868077..868636)
location: region:865282-868636:1
so has part: feature:865282-865397:1:exon
so has part: feature:865601-865832:1:exon
so has part: feature:866063-866200:1:exon
so has part: feature:866466-866578:1:exon
so has part: feature:866657-867047:1:exon
so has part: feature:867317-867554:1:exon
so has part: feature:867733-867900:1:exon
so has part: feature:868077-868636:1:exon

XP_015500319.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:865282-865397:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865601-865832:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:866063-866200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866466-866578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866657-867047:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:867317-867554:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867733-867900:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868077-868636:1:exon

RABEPK
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: RABEPK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(869440..871797)
location: region:869440-871797:-1
so has part: feature:869440-871797:-1:exon
subclass of: SO_0000010

107212051
type: Gene
SIO_000068: ncbigene

position:869440:-1
position: 869440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871797:-1
position: 871797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:869440-871797:-1:exon

RABEPK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RABEPK
product: Rab9 effector protein with kelch motifs
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_015644835.3
SIO_010081: RABEPK
subclass of: SO_0000673
so part of: RABEPK
location: complement(join(869440..869993,870183..870332,870515..870664,870933..871094,871203..871355,871433..871569,871708..871797))
location: region:869440-871797:-1
so has part: feature:871708-871797:-1:exon
so has part: feature:871433-871569:-1:exon
so has part: feature:871203-871355:-1:exon
so has part: feature:870933-871094:-1:exon
so has part: feature:870515-870664:-1:exon
so has part: feature:870183-870332:-1:exon
so has part: feature:869440-869993:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871708-871797:-1:exon

position:871708:-1
position: 871708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:871433-871569:-1:exon

position:871433:-1
position: 871433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871569:-1
position: 871569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:871203-871355:-1:exon

position:871203:-1
position: 871203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871355:-1
position: 871355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:870933-871094:-1:exon

position:870933:-1
position: 870933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871094:-1
position: 871094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:870515-870664:-1:exon

position:870515:-1
position: 870515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870664:-1
position: 870664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:870183-870332:-1:exon

position:870183:-1
position: 870183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870332:-1
position: 870332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:869440-869993:-1:exon

position:869993:-1
position: 869993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RABEPK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RABEPK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab9 effector protein with kelch motifs
translation: MAPRALPLLQPGRRPRPGQWYRLSPRGERPRGRVGLGCLLLPGRVLLLGGADPAGAFADAHFVELAPLRWVSAGWRGLRPRYEHATFLPATGPPRLWVFGGAHPAGNRGCVQVLDPEIGTWESPAVRGVQPQPRTFHTSSAAIGARLFVFGGGDKGAEPVKDQRLHVFDTATLTWSQPETQGDPPSPRHGHAVVAVGTKLFIHGGLAGDVFYNDLFCIDTNDMRWVKIPATGDIPGGRASHSSAVFQDHLYIFGGIGPDGTLDTTYKYHTGRQQWTLLQFESPLPSGRLDHTMCVIPWQAGAHGDTGDSPAETEPPLAAGDRAEPLQEGVGYAEETSVHLLFVFGGMDTQGQIHRDCLVTLIQ
SIO_010081: RABEPK
subclass of: SO_0000673
so part of: RABEPK
location: complement(join(869713..869993,870183..870332,870515..870664,870933..871094,871203..871355,871433..871569,871708..871766))
location: region:869713-871766:-1
so has part: feature:871708-871766:-1:exon
so has part: feature:871433-871569:-1:exon
so has part: feature:871203-871355:-1:exon
so has part: feature:870933-871094:-1:exon
so has part: feature:870515-870664:-1:exon
so has part: feature:870183-870332:-1:exon
so has part: feature:869713-869993:-1:exon

XP_015500321.1
type: Protein
SIO_000068: ncbiprotein

position:869713:-1
position: 869713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871766:-1
position: 871766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871708-871766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871433-871569:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:871203-871355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:870933-871094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:870515-870664:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870183-870332:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:869713-869993:-1:exon

PPP6C
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PPP6C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 871839..875180
location: region:871839-875180:1
so has part: feature:871839-875180:1:exon
subclass of: SO_0000010

107211900
type: Gene
SIO_000068: ncbigene

position:871839:1
position: 871839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875180:1
position: 875180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871839-875180:1:exon

PPP6C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPP6C
product: protein phosphatase 6 catalytic subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 26 ESTs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_015644485.3
SIO_010081: PPP6C
subclass of: SO_0000673
so part of: PPP6C
location: join(871839..871969,872102..872197,872288..872353,872726..872867,873288..873367,873503..873712,874371..875180)
location: region:871839-875180:1
so has part: feature:871839-871969:1:exon
so has part: feature:872102-872197:1:exon
so has part: feature:872288-872353:1:exon
so has part: feature:872726-872867:1:exon
so has part: feature:873288-873367:1:exon
so has part: feature:873503-873712:1:exon
so has part: feature:874371-875180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871839-871969:1:exon

position:871969:1
position: 871969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:872102-872197:1:exon

position:872102:1
position: 872102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872197:1
position: 872197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:872288-872353:1:exon

position:872288:1
position: 872288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872353:1
position: 872353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:872726-872867:1:exon

position:872726:1
position: 872726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872867:1
position: 872867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:873288-873367:1:exon

position:873288:1
position: 873288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873367:1
position: 873367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:873503-873712:1:exon

position:873503:1
position: 873503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873712:1
position: 873712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:874371-875180:1:exon

position:874371:1
position: 874371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP6C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPP6C
product: protein phosphatase 6 catalytic subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_033518329.1
SIO_010081: PPP6C
subclass of: SO_0000673
so part of: PPP6C
location: join(871839..871969,872102..872197,872726..872867,873288..873367,873503..873712,874371..875180)
location: region:871839-875180:1
so has part: feature:871839-871969:1:exon
so has part: feature:872102-872197:1:exon
so has part: feature:872726-872867:1:exon
so has part: feature:873288-873367:1:exon
so has part: feature:873503-873712:1:exon
so has part: feature:874371-875180:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:871839-871969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872102-872197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872726-872867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873288-873367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873503-873712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:874371-875180:1:exon

PPP6C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PPP6C
product: protein phosphatase 6 catalytic subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 30 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_015644484.3
SIO_010081: PPP6C
subclass of: SO_0000673
so part of: PPP6C
location: join(871854..872197,872288..872353,872726..872867,873288..873367,873503..873712,874371..875180)
location: region:871854-875180:1
so has part: feature:871854-872197:1:exon
so has part: feature:872288-872353:1:exon
so has part: feature:872726-872867:1:exon
so has part: feature:873288-873367:1:exon
so has part: feature:873503-873712:1:exon
so has part: feature:874371-875180:1:exon

position:871854:1
position: 871854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871854-872197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872288-872353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872726-872867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873288-873367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873503-873712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:874371-875180:1:exon

PPP6C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPP6C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 6 catalytic subunit isoform X1
translation: MAPLDLDKYVEIARLCKYLPENDLKVRPRRRGRDRPGRARAGRALPGGPERAVPVVPALTPSPPRCLPQRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTIAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTTTPYFL
SIO_010081: PPP6C
subclass of: SO_0000673
so part of: PPP6C
location: join(871895..872197,872288..872353,872726..872867,873288..873367,873503..873712,874371..874619)
location: region:871895-874619:1
so has part: feature:871895-872197:1:exon
so has part: feature:872288-872353:1:exon
so has part: feature:872726-872867:1:exon
so has part: feature:873288-873367:1:exon
so has part: feature:873503-873712:1:exon
so has part: feature:874371-874619:1:exon

XP_015499970.1
type: Protein
SIO_000068: ncbiprotein

position:871895:1
position: 871895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874619:1
position: 874619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871895-872197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872288-872353:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872726-872867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873288-873367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873503-873712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:874371-874619:1:exon

PPP6C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPP6C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 6 catalytic subunit isoform X2
translation: MAPLDLDKYVEIARLCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQFYDLCELFRTGGQVPDTNYIFMGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTIAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTTTPYFL
SIO_010081: PPP6C
subclass of: SO_0000673
so part of: PPP6C
location: join(871895..871969,872102..872197,872288..872353,872726..872867,873288..873367,873503..873712,874371..874619)
location: region:871895-874619:1
so has part: feature:871895-871969:1:exon
so has part: feature:872102-872197:1:exon
so has part: feature:872288-872353:1:exon
so has part: feature:872726-872867:1:exon
so has part: feature:873288-873367:1:exon
so has part: feature:873503-873712:1:exon
so has part: feature:874371-874619:1:exon

XP_015499971.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:871895-871969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872102-872197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872288-872353:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:872726-872867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873288-873367:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:873503-873712:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:874371-874619:1:exon

PPP6C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PPP6C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 6 catalytic subunit isoform X3
translation: MAPLDLDKYVEIARLCKYLPENDLKRLCDYVCDLLLEESNVQPVSTPVTVCGDIHGQGDFVDRGYYSLETFTYLLALKAKWPDRITLLRGNHESRQITQVYGFYDECQTKYGNANAWRYCTKVFDMLTIAALIDEQILCVHGGLSPDIKTLDQIRTIERNQEIPHKGAFCDLVWSDPEDVDTWAISPRGAGWLFGAKVTNEFVHINNLKLICRAHQLVHEGYKFMFDEKLVTVWSAPNYCYRCGNIASIMVFKDVNTREPKLFRAVPDSERVIPPRTTTPYFL
SIO_010081: PPP6C
subclass of: SO_0000673
so part of: PPP6C
location: join(871895..871969,872102..872197,872726..872867,873288..873367,873503..873712,874371..874619)
location: region:871895-874619:1
so has part: feature:871895-871969:1:exon
so has part: feature:872102-872197:1:exon
so has part: feature:872726-872867:1:exon
so has part: feature:873288-873367:1:exon
so has part: feature:873503-873712:1:exon
so has part: feature:874371-874619:1:exon

XP_033374220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:871895-871969:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:872102-872197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872726-872867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:873288-873367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:873503-873712:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:874371-874619:1:exon

ARPC5L
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ARPC5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 875262..878304
location: region:875262-878304:1
so has part: feature:875262-878304:1:exon
subclass of: SO_0000010

107212123
type: Gene
SIO_000068: ncbigene

position:875262:1
position: 875262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:878304:1
position: 878304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875262-878304:1:exon

ARPC5L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ARPC5L
product: actin related protein 2/3 complex subunit 5 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_015645033.3
SIO_010081: ARPC5L
subclass of: SO_0000673
so part of: ARPC5L
location: join(875262..875457,875589..875661,875917..876093,877738..878304)
location: region:875262-878304:1
so has part: feature:875262-875457:1:exon
so has part: feature:875589-875661:1:exon
so has part: feature:875917-876093:1:exon
so has part: feature:877738-878304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875262-875457:1:exon

position:875457:1
position: 875457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875589-875661:1:exon

position:875589:1
position: 875589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875661:1
position: 875661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875917-876093:1:exon

position:875917:1
position: 875917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876093:1
position: 876093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:877738-878304:1:exon

position:877738:1
position: 877738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARPC5L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ARPC5L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin-related protein 2/3 complex subunit 5-like protein
translation: MARSTLSSRFRRLDIDQYDENRFVEEPEEAAAAEPDASPEVEALLRQGEALRAFHTAIRSSPGNSRNQAMKEQAQGTMLKVLTSFKSSEIEQAVNSLDRNGVDLLMKYIYKGFEKPTENSSAILLQWHEKALAVGGLGSIVRVLTARKTV
SIO_010081: ARPC5L
subclass of: SO_0000673
so part of: ARPC5L
location: join(875318..875457,875589..875661,875917..876093,877738..877800)
location: region:875318-877800:1
so has part: feature:875318-875457:1:exon
so has part: feature:875589-875661:1:exon
so has part: feature:875917-876093:1:exon
so has part: feature:877738-877800:1:exon

XP_015500519.1
type: Protein
SIO_000068: ncbiprotein

position:875318:1
position: 875318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877800:1
position: 877800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875318-875457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875589-875661:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:875917-876093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:877738-877800:1:exon

GOLGA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(878989..896168)
location: region:878989-896168:-1
so has part: feature:878989-896168:-1:exon
subclass of: SO_0000010

107212121
type: Gene
SIO_000068: ncbigene

position:878989:-1
position: 878989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896168:-1
position: 896168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878989-896168:-1:exon

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GOLGA1
product: golgin A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033518323.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(878989..881261,882099..882185,883030..883194,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895751,896091..896168))
location: region:878989-896168:-1
so has part: feature:896091-896168:-1:exon
so has part: feature:895443-895751:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:878989-881261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896091-896168:-1:exon

position:896091:-1
position: 896091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:895443-895751:-1:exon

position:895443:-1
position: 895443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895751:-1
position: 895751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:893726-893816:-1:exon

position:893726:-1
position: 893726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893816:-1
position: 893816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:892260-892334:-1:exon

position:892260:-1
position: 892260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892334:-1
position: 892334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:891675-891772:-1:exon

position:891675:-1
position: 891675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891772:-1
position: 891772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:891135-891167:-1:exon

position:891135:-1
position: 891135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891167:-1
position: 891167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:890479-890607:-1:exon

position:890479:-1
position: 890479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890607:-1
position: 890607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:890038-890207:-1:exon

position:890038:-1
position: 890038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890207:-1
position: 890207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:889542-889653:-1:exon

position:889542:-1
position: 889542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889653:-1
position: 889653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:889323-889418:-1:exon

position:889323:-1
position: 889323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889418:-1
position: 889418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:888979-889104:-1:exon

position:888979:-1
position: 888979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889104:-1
position: 889104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:888041-888136:-1:exon

position:888041:-1
position: 888041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888136:-1
position: 888136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:887513-887608:-1:exon

position:887513:-1
position: 887513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887608:-1
position: 887608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:887102-887254:-1:exon

position:887102:-1
position: 887102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887254:-1
position: 887254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:886769-886864:-1:exon

position:886769:-1
position: 886769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886864:-1
position: 886864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:885959-886048:-1:exon

position:885959:-1
position: 885959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886048:-1
position: 886048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:885053-885155:-1:exon

position:885053:-1
position: 885053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885155:-1
position: 885155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:884553-884761:-1:exon

position:884553:-1
position: 884553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884761:-1
position: 884761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:884267-884428:-1:exon

position:884267:-1
position: 884267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884428:-1
position: 884428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:883736-883795:-1:exon

position:883736:-1
position: 883736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883795:-1
position: 883795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:883030-883194:-1:exon

position:883030:-1
position: 883030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883194:-1
position: 883194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:882099-882185:-1:exon

position:882099:-1
position: 882099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:882185:-1
position: 882185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:878989-881261:-1:exon

position:881261:-1
position: 881261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GOLGA1
product: golgin A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_033518324.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(878989..881261,882099..882185,883030..883194,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890195,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895751,895841..896031))
location: region:878989-896031:-1
so has part: feature:895841-896031:-1:exon
so has part: feature:895443-895751:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890195:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:878989-881261:-1:exon

position:896031:-1
position: 896031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895841-896031:-1:exon

position:895841:-1
position: 895841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:895443-895751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890038-890195:-1:exon

position:890195:-1
position: 890195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:878989-881261:-1:exon

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GOLGA1
product: golgin A1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_033518327.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(878989..881261,882099..882185,883030..883194,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895751,895841..896031))
location: region:878989-896031:-1
so has part: feature:895841-896031:-1:exon
so has part: feature:895443-895751:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:878989-881261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:895841-896031:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895443-895751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:878989-881261:-1:exon

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GOLGA1
product: golgin A1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033518325.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(878989..881261,882099..882185,883030..883194,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,893726..893816,895443..895751,895841..896030))
location: region:878989-896030:-1
so has part: feature:895841-896030:-1:exon
so has part: feature:895443-895751:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
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so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:878989-881261:-1:exon

position:896030:-1
position: 896030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895841-896030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895443-895751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:878989-881261:-1:exon

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GOLGA1
product: golgin A1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_033518326.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(878989..881261,882099..882185,883030..883194,883736..883795,884267..884428,884643..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895751,895841..896030))
location: region:878989-896030:-1
so has part: feature:895841-896030:-1:exon
so has part: feature:895443-895751:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884643-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:878989-881261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:895841-896030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895443-895751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884643-884761:-1:exon

position:884643:-1
position: 884643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:878989-881261:-1:exon

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GOLGA1
product: golgin A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_033518322.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(878989..881261,882099..882185,883030..883194,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895751,895841..896030))
location: region:878989-896030:-1
so has part: feature:895841-896030:-1:exon
so has part: feature:895443-895751:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:878989-881261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:895841-896030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895443-895751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:878989-881261:-1:exon

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GOLGA1
product: golgin A1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_015645029.2
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(878989..881261,882099..882185,883030..883194,883736..883795,884267..884428,884604..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895751,895841..896028))
location: region:878989-896028:-1
so has part: feature:895841-896028:-1:exon
so has part: feature:895443-895751:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884604-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:878989-881261:-1:exon

position:896028:-1
position: 896028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895841-896028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895443-895751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884604-884761:-1:exon

position:884604:-1
position: 884604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:878989-881261:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X4
translation: MFAKLKKKIAEEAAVAPRPGGAARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEVKLSASMRKFQEQNEAHQASRAKMAEGMALALEKKDKEWMEKLGQVEKEKKMLQTQLQEMREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLSRTEQELEAHAQELTRAQAELQEARSESSGLRKDLQDLQQQFLELEARRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEMLQVEHESLKVEYEQQKQKMTFEFAEKDKFTEQLQEKVSSLEKKLERNLSGDEHVRELLKEKAALEQRLEESRQQVLTDRTRHSEAVNRLETQNKELEEKLQIATETLKKSKEVAADRDLKIQKLQTDLEDERNQLQQQILSEKHQYDQKVTGLESQIGALEKAWELDKTTTQHRISQLEKENENLKRSKEEYESSLKQQESELNRLKNEMSSRETVSVEIAKALEETRKQREELQQQVSHLNVLIKEKDQLIDEKCDLLLKQKEKLNQLSQDHEAALLQVHQLQLDIEASQSQAVEKEETARKEIDELKLQVQECLLAREHEKNVSAVGNPSCQTSQEKREVLEMEESTRVLNNEHFPSPENSVVEQNGEVAAADVIQLQKDNRELEQQIAEKNKMIKQLQQRMTELKKTLQKELKIRPESEVPELRANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(881181..881261,882099..882185,883030..883194,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,893726..893816,895443..895577))
location: region:881181-895577:-1
so has part: feature:895443-895577:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:881181-881261:-1:exon

XP_033374216.1
type: Protein
SIO_000068: ncbiprotein

position:881181:-1
position: 881181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895577:-1
position: 895577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895443-895577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:881181-881261:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X2
translation: MFAKLKKKIAEEAAVAPRPGGAARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEKKDKEWMEKLGQVEKEKKMLQTQLQEMREQSLNLFQKRDEIDELEGFQQQEIAKVKHMEESLSRTEQELEAHAQELTRAQAELQEARSESSGLRKDLQDLQQQFLELEARRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEMLQVEHESLKVEYEQQKQKMTFEFAEKDKFTEQLQEKVSSLEKKLERNLSGDEHVRELLKEKAALEQRLEESRQQVLTDRTRHSEAVNRLETQNKELEEKLQIATETLKKSKEVAADRDLKIQKLQTDLEDERNQLQQQILSEKHQYDQKVTGLESQIGALEKAWELDKTTTQHRISQLEKENENLKRSKEEYESSLKQQESELNRLKNEMSSRETVSVEIAKALEETRKQREELQQQVSHLNVLIKEKDQLIDEKCDLLLKQKEKLNQLSQDHEAALLQVHQLQLDIEASQSQAVEKEETARKEIDELKLQVQECLLAREHEKNVSAVGNPSCQTSQEKREVLEMEESTRVLNNEHFPSPENSVVEQNGEVAAADVIQLQKDNRELEQQIAEKNKMIKQLQQRMTELKKTLQKELKIRPESEVPELRANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(881181..881261,882099..882185,883030..883194,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890195,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895577))
location: region:881181-895577:-1
so has part: feature:895443-895577:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890195:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:881181-881261:-1:exon

XP_033374215.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:895443-895577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890038-890195:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:881181-881261:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X6
translation: MFAKLKKKIAEEAAVAPRPGGAARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEKKDKEWMEKLGQVEKEKKMLQTQLQEMREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLSRTEQELEAHAQELTRAQAELQEARSESSGLRKDLQDLQQQFLELEARRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEMLQVEHESLKVEYEQQKQKMTFEFAEKDKFTEQLQEKVSSLEKKLERNLSGDEHVRELLKEKAALEQRLEESRQQVLTDRTRHSEAVNRLETQQTDLEDERNQLQQQILSEKHQYDQKVTGLESQIGALEKAWELDKTTTQHRISQLEKENENLKRSKEEYESSLKQQESELNRLKNEMSSRETVSVEIAKALEETRKQREELQQQVSHLNVLIKEKDQLIDEKCDLLLKQKEKLNQLSQDHEAALLQVHQLQLDIEASQSQAVEKEETARKEIDELKLQVQECLLAREHEKNVSAVGNPSCQTSQEKREVLEMEESTRVLNNEHFPSPENSVVEQNGEVAAADVIQLQKDNRELEQQIAEKNKMIKQLQQRMTELKKTLQKELKIRPESEVPELRANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(881181..881261,882099..882185,883030..883194,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895577))
location: region:881181-895577:-1
so has part: feature:895443-895577:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:881181-881261:-1:exon

XP_033374218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:895443-895577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:881181-881261:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X5
translation: MFAKLKKKIAEEAAVAPRPGGAARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEKKDKEWMEKLGQVEKEKKMLQTQLQEMREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLSRTEQELEAHAQELTRAQAELQEARSESSGLRKDLQDLQQQFLELEARRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEMLQVEHESLKVEYEQQKQKMTFEFAEKDKFTEQLQEKVSSLEKKLERNLSGDEHVRELLKEKAALEQRLEESRQQVLTDRTRHSEAVNRLETQNKELEEKLQIATETLKKSKEVAADRDLKIQKLQTDLEDERNQLQQQILSEKHQYDQKVTGLESQIGALEKAWELDKTTTQHRISQLEKENENLKRSKEEYESSLKQQESELNRLKNEMSSRETVSVEIAKALEETRKQREELQQQVSHLNVLIKEKDQLIDEKCDLLLKQKEKLNQLSQDHEAALLQVHQLQLDIEASQSQAVEKEETARKEIDELKLQVLEMEESTRVLNNEHFPSPENSVVEQNGEVAAADVIQLQKDNRELEQQIAEKNKMIKQLQQRMTELKKTLQKELKIRPESEVPELRANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(881181..881261,882099..882185,883030..883194,883736..883795,884267..884428,884643..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895577))
location: region:881181-895577:-1
so has part: feature:895443-895577:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884643-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:881181-881261:-1:exon

XP_033374217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:895443-895577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:884643-884761:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:881181-881261:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X3
translation: MFAKLKKKIAEEAAVAPRPGGAARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEKKDKEWMEKLGQVEKEKKMLQTQLQEMREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLSRTEQELEAHAQELTRAQAELQEARSESSGLRKDLQDLQQQFLELEARRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEMLQVEHESLKVEYEQQKQKMTFEFAEKDKFTEQLQEKVSSLEKKLERNLSGDEHVRELLKEKAALEQRLEESRQQVLTDRTRHSEAVNRLETQNKELEEKLQIATETLKKSKEVAADRDLKIQKLQTDLEDERNQLQQQILSEKHQYDQKVTGLESQIGALEKAWELDKTTTQHRISQLEKENENLKRSKEEYESSLKQQESELNRLKNEMSSRETVSVEIAKALEETRKQREELQQQVSHLNVLIKEKDQLIDEKCDLLLKQKEKLNQLSQDHEAALLQVHQLQLDIEASQSQAVEKEETARKEIDELKLQVQECLLAREHEKNVLEMEESTRVLNNEHFPSPENSVVEQNGEVAAADVIQLQKDNRELEQQIAEKNKMIKQLQQRMTELKKTLQKELKIRPESEVPELRANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(881181..881261,882099..882185,883030..883194,883736..883795,884267..884428,884604..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895577))
location: region:881181-895577:-1
so has part: feature:895443-895577:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884604-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:881181-881261:-1:exon

XP_015500515.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:895443-895577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:884604-884761:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:881181-881261:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X1
translation: MFAKLKKKIAEEAAVAPRPGGAARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEKKDKEWMEKLGQVEKEKKMLQTQLQEMREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLSRTEQELEAHAQELTRAQAELQEARSESSGLRKDLQDLQQQFLELEARRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEMLQVEHESLKVEYEQQKQKMTFEFAEKDKFTEQLQEKVSSLEKKLERNLSGDEHVRELLKEKAALEQRLEESRQQVLTDRTRHSEAVNRLETQNKELEEKLQIATETLKKSKEVAADRDLKIQKLQTDLEDERNQLQQQILSEKHQYDQKVTGLESQIGALEKAWELDKTTTQHRISQLEKENENLKRSKEEYESSLKQQESELNRLKNEMSSRETVSVEIAKALEETRKQREELQQQVSHLNVLIKEKDQLIDEKCDLLLKQKEKLNQLSQDHEAALLQVHQLQLDIEASQSQAVEKEETARKEIDELKLQVQECLLAREHEKNVSAVGNPSCQTSQEKREVLEMEESTRVLNNEHFPSPENSVVEQNGEVAAADVIQLQKDNRELEQQIAEKNKMIKQLQQRMTELKKTLQKELKIRPESEVPELRANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(881181..881261,882099..882185,883030..883194,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895577))
location: region:881181-895577:-1
so has part: feature:895443-895577:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:881181-881261:-1:exon

XP_033374213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:895443-895577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:881181-881261:-1:exon

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X1
translation: MFAKLKKKIAEEAAVAPRPGGAARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEKKDKEWMEKLGQVEKEKKMLQTQLQEMREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLSRTEQELEAHAQELTRAQAELQEARSESSGLRKDLQDLQQQFLELEARRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEMLQVEHESLKVEYEQQKQKMTFEFAEKDKFTEQLQEKVSSLEKKLERNLSGDEHVRELLKEKAALEQRLEESRQQVLTDRTRHSEAVNRLETQNKELEEKLQIATETLKKSKEVAADRDLKIQKLQTDLEDERNQLQQQILSEKHQYDQKVTGLESQIGALEKAWELDKTTTQHRISQLEKENENLKRSKEEYESSLKQQESELNRLKNEMSSRETVSVEIAKALEETRKQREELQQQVSHLNVLIKEKDQLIDEKCDLLLKQKEKLNQLSQDHEAALLQVHQLQLDIEASQSQAVEKEETARKEIDELKLQVQECLLAREHEKNVSAVGNPSCQTSQEKREVLEMEESTRVLNNEHFPSPENSVVEQNGEVAAADVIQLQKDNRELEQQIAEKNKMIKQLQQRMTELKKTLQKELKIRPESEVPELRANSEVPNASVTVTNNSDLNDSREINFEYLKHVVLKFMSCRESEAFHLIKAVSVLLNFSQEEENMLKETLEYKMSWFGSKPSPKGSIRPSISSPRTLWP
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(881181..881261,882099..882185,883030..883194,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895577))
location: region:881181-895577:-1
so has part: feature:895443-895577:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883030-883194:-1:exon
so has part: feature:882099-882185:-1:exon
so has part: feature:881181-881261:-1:exon

XP_033374214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:895443-895577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883030-883194:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:882099-882185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:881181-881261:-1:exon

GOLGA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: GOLGA1
product: golgin A1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033518328.1
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(883302..883454,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895751,895841..896033))
location: region:883302-896033:-1
so has part: feature:895841-896033:-1:exon
so has part: feature:895443-895751:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883302-883454:-1:exon

position:883302:-1
position: 883302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896033:-1
position: 896033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895841-896033:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:895443-895751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:883302-883454:-1:exon

position:883454:-1
position: 883454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLGA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: GOLGA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 1 isoform X7
translation: MFAKLKKKIAEEAAVAPRPGGAARIPRSVSKESITSVGADSGDDFASDGSSSREDLSSQLLRRNEQIRKLEVKLSDYADQIRNLQKIKEKLENALEKHQDSSMRKFQEQNEAHQASRAKMAEGMALALEKKDKEWMEKLGQVEKEKKMLQTQLQEMREQSLNLFQKRDEIDELEGFQQQEIAKVKHMLLKKEESLSRTEQELEAHAQELTRAQAELQEARSESSGLRKDLQDLQQQFLELEARRDELMTAETNAENKITALELREQELQTVIQQLSVDLQNARVAGSGCEKRLEMLQVEHESLKVEYEQQKQKMTFEFAEKDKFTEQLQEKVSSLEKKLERNLSGDEHVRELLKEKAALEQRLEESRQQVLTDRTRHSEAVNRLETQNKELEEKLQIATETLKKSKEVAADRDLKIQKLQTDLEDERNQLQQQILSEKHQYDQKVTGLESQIGALEKAWELDKTTTQHRISQLEKENENLKRSKEEYESSLKQQESELNRLKNEMSSRETVSVEIAKALEETRKQREELQQQVSHLNVLIKEKDQLIDEKCDLLLKQKEKLNQLSQDHEAALLQVHQLQLDIEASQSQAVEKEETARKEIDELKLQVQECLLAREHEKNVSAVGNPSCQTSQEKREVLEMEESTRVLNNEHFPSPENSVVEQNGEVAAADVIQLQKDNRELEQQIAEKNKMIKQLQQRMTELKKTLQKELFHAGLGTYTEH
SIO_010081: GOLGA1
subclass of: SO_0000673
so part of: GOLGA1
location: complement(join(883419..883454,883736..883795,884267..884428,884553..884761,885053..885155,885959..886048,886769..886864,887102..887254,887513..887608,888041..888136,888979..889104,889323..889418,889542..889653,890038..890207,890479..890607,891135..891167,891675..891772,892260..892334,893726..893816,895443..895577))
location: region:883419-895577:-1
so has part: feature:895443-895577:-1:exon
so has part: feature:893726-893816:-1:exon
so has part: feature:892260-892334:-1:exon
so has part: feature:891675-891772:-1:exon
so has part: feature:891135-891167:-1:exon
so has part: feature:890479-890607:-1:exon
so has part: feature:890038-890207:-1:exon
so has part: feature:889542-889653:-1:exon
so has part: feature:889323-889418:-1:exon
so has part: feature:888979-889104:-1:exon
so has part: feature:888041-888136:-1:exon
so has part: feature:887513-887608:-1:exon
so has part: feature:887102-887254:-1:exon
so has part: feature:886769-886864:-1:exon
so has part: feature:885959-886048:-1:exon
so has part: feature:885053-885155:-1:exon
so has part: feature:884553-884761:-1:exon
so has part: feature:884267-884428:-1:exon
so has part: feature:883736-883795:-1:exon
so has part: feature:883419-883454:-1:exon

XP_033374219.1
type: Protein
SIO_000068: ncbiprotein

position:883419:-1
position: 883419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:895443-895577:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:893726-893816:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:892260-892334:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891675-891772:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:891135-891167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:890479-890607:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:890038-890207:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889542-889653:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:889323-889418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888979-889104:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888041-888136:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887513-887608:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887102-887254:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886769-886864:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:885959-886048:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885053-885155:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:884553-884761:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:884267-884428:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:883736-883795:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:883419-883454:-1:exon

SCAI
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(896764..934362)
location: region:896764-934362:-1
so has part: feature:896764-934362:-1:exon
subclass of: SO_0000010

107212089
type: Gene
SIO_000068: ncbigene

position:896764:-1
position: 896764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934362:-1
position: 934362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896764-934362:-1:exon

SCAI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SCAI
product: suppressor of cancer cell invasion, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015644940.1
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(896764..902003,903103..903203,903285..903458,903994..904066,908438..908519,908986..909085,911144..911222,911851..911952,912522..912623,913441..913593,914216..914314,915070..915166,915822..915920,916460..916546,917150..917245,923220..923351,926435..926496,934273..934356))
location: region:896764-934356:-1
so has part: feature:934273-934356:-1:exon
so has part: feature:926435-926496:-1:exon
so has part: feature:923220-923351:-1:exon
so has part: feature:917150-917245:-1:exon
so has part: feature:916460-916546:-1:exon
so has part: feature:915822-915920:-1:exon
so has part: feature:915070-915166:-1:exon
so has part: feature:914216-914314:-1:exon
so has part: feature:913441-913593:-1:exon
so has part: feature:912522-912623:-1:exon
so has part: feature:911851-911952:-1:exon
so has part: feature:911144-911222:-1:exon
so has part: feature:908986-909085:-1:exon
so has part: feature:908438-908519:-1:exon
so has part: feature:903994-904066:-1:exon
so has part: feature:903285-903458:-1:exon
so has part: feature:903103-903203:-1:exon
so has part: feature:896764-902003:-1:exon

position:934356:-1
position: 934356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934273-934356:-1:exon

position:934273:-1
position: 934273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:926435-926496:-1:exon

position:926435:-1
position: 926435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926496:-1
position: 926496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:923220-923351:-1:exon

position:923220:-1
position: 923220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923351:-1
position: 923351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:917150-917245:-1:exon

position:917150:-1
position: 917150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917245:-1
position: 917245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:916460-916546:-1:exon

position:916460:-1
position: 916460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916546:-1
position: 916546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:915822-915920:-1:exon

position:915822:-1
position: 915822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915920:-1
position: 915920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:915070-915166:-1:exon

position:915070:-1
position: 915070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915166:-1
position: 915166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:914216-914314:-1:exon

position:914216:-1
position: 914216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914314:-1
position: 914314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:913441-913593:-1:exon

position:913441:-1
position: 913441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:913593:-1
position: 913593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:912522-912623:-1:exon

position:912522:-1
position: 912522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912623:-1
position: 912623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:911851-911952:-1:exon

position:911851:-1
position: 911851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911952:-1
position: 911952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:911144-911222:-1:exon

position:911144:-1
position: 911144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911222:-1
position: 911222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:908986-909085:-1:exon

position:908986:-1
position: 908986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909085:-1
position: 909085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:908438-908519:-1:exon

position:908438:-1
position: 908438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:908519:-1
position: 908519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:903994-904066:-1:exon

position:903994:-1
position: 903994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904066:-1
position: 904066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:903285-903458:-1:exon

position:903285:-1
position: 903285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903458:-1
position: 903458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:903103-903203:-1:exon

position:903103:-1
position: 903103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903203:-1
position: 903203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:896764-902003:-1:exon

position:902003:-1
position: 902003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCAI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SCAI
product: suppressor of cancer cell invasion, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015644943.2
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(901693..902003,903103..903203,903285..903458,903994..904066,908438..908519,908986..909085,911144..911222,911851..911952,912522..912623,913441..913593,914216..914314,915070..915166,915822..915920,916460..916546,917150..917245,923220..923351,925035..925132,926435..926496,934273..934362))
location: region:901693-934362:-1
so has part: feature:934273-934362:-1:exon
so has part: feature:926435-926496:-1:exon
so has part: feature:925035-925132:-1:exon
so has part: feature:923220-923351:-1:exon
so has part: feature:917150-917245:-1:exon
so has part: feature:916460-916546:-1:exon
so has part: feature:915822-915920:-1:exon
so has part: feature:915070-915166:-1:exon
so has part: feature:914216-914314:-1:exon
so has part: feature:913441-913593:-1:exon
so has part: feature:912522-912623:-1:exon
so has part: feature:911851-911952:-1:exon
so has part: feature:911144-911222:-1:exon
so has part: feature:908986-909085:-1:exon
so has part: feature:908438-908519:-1:exon
so has part: feature:903994-904066:-1:exon
so has part: feature:903285-903458:-1:exon
so has part: feature:903103-903203:-1:exon
so has part: feature:901693-902003:-1:exon

position:901693:-1
position: 901693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934273-934362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:926435-926496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:925035-925132:-1:exon

position:925035:-1
position: 925035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925132:-1
position: 925132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:923220-923351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917150-917245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916460-916546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:915822-915920:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:915070-915166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914216-914314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:913441-913593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912522-912623:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911851-911952:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:911144-911222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:908986-909085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908438-908519:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:903994-904066:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:903285-903458:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:903103-903203:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901693-902003:-1:exon

SCAI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SCAI
product: suppressor of cancer cell invasion, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033518359.1
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(901693..902003,903103..903203,903285..903458,903994..904066,908438..908519,908986..909085,911144..911222,911851..911952,912522..912623,913441..913593,914216..914314,915070..915166,915822..915920,916460..916546,917150..917245,923220..923351,926435..926496,934089..934133,934273..934300))
location: region:901693-934300:-1
so has part: feature:934273-934300:-1:exon
so has part: feature:934089-934133:-1:exon
so has part: feature:926435-926496:-1:exon
so has part: feature:923220-923351:-1:exon
so has part: feature:917150-917245:-1:exon
so has part: feature:916460-916546:-1:exon
so has part: feature:915822-915920:-1:exon
so has part: feature:915070-915166:-1:exon
so has part: feature:914216-914314:-1:exon
so has part: feature:913441-913593:-1:exon
so has part: feature:912522-912623:-1:exon
so has part: feature:911851-911952:-1:exon
so has part: feature:911144-911222:-1:exon
so has part: feature:908986-909085:-1:exon
so has part: feature:908438-908519:-1:exon
so has part: feature:903994-904066:-1:exon
so has part: feature:903285-903458:-1:exon
so has part: feature:903103-903203:-1:exon
so has part: feature:901693-902003:-1:exon

position:934300:-1
position: 934300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934273-934300:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:934089-934133:-1:exon

position:934089:-1
position: 934089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934133:-1
position: 934133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:926435-926496:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:923220-923351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917150-917245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916460-916546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:915822-915920:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:915070-915166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914216-914314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:913441-913593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912522-912623:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911851-911952:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:911144-911222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:908986-909085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908438-908519:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:903994-904066:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:903285-903458:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:903103-903203:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901693-902003:-1:exon

SCAI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SCAI
product: suppressor of cancer cell invasion, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015644944.3
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(901693..902003,903103..903203,903285..903458,903994..904066,908438..908519,908986..909085,911144..911222,911851..911952,912522..912623,913441..913593,914216..914314,915070..915166,915822..915920,916460..916546,917150..917245,923220..923351,925035..925132,926435..926496,934089..934155))
location: region:901693-934155:-1
so has part: feature:934089-934155:-1:exon
so has part: feature:926435-926496:-1:exon
so has part: feature:925035-925132:-1:exon
so has part: feature:923220-923351:-1:exon
so has part: feature:917150-917245:-1:exon
so has part: feature:916460-916546:-1:exon
so has part: feature:915822-915920:-1:exon
so has part: feature:915070-915166:-1:exon
so has part: feature:914216-914314:-1:exon
so has part: feature:913441-913593:-1:exon
so has part: feature:912522-912623:-1:exon
so has part: feature:911851-911952:-1:exon
so has part: feature:911144-911222:-1:exon
so has part: feature:908986-909085:-1:exon
so has part: feature:908438-908519:-1:exon
so has part: feature:903994-904066:-1:exon
so has part: feature:903285-903458:-1:exon
so has part: feature:903103-903203:-1:exon
so has part: feature:901693-902003:-1:exon

position:934155:-1
position: 934155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934089-934155:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:926435-926496:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:925035-925132:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:923220-923351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917150-917245:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916460-916546:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:915822-915920:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:915070-915166:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:914216-914314:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:913441-913593:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:912522-912623:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:911851-911952:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:911144-911222:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:908986-909085:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908438-908519:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:903994-904066:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:903285-903458:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:903103-903203:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901693-902003:-1:exon

SCAI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SCAI isoform X1
translation: MTELAIKEIMSSGGAEDDIPQAERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDVYTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLSETGAPLLEQGMIVGQLALADALIIGNCNNQVKFSELTIDMFRMLQALEREPMNLASQMNKPGMQESTEKPARRENPHKYLLYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPSGRSDSEGPYDFGGVLTNSNRDIINGDAIHKRNQSYKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLSPTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQDYLRKINRDIAQLLTHSRSIDQSFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRQETRNYPESYPQLPRDETVENPHLQKHILELASILDVRNVFLENTLDDY
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(901854..902003,903103..903203,903285..903458,903994..904066,908438..908519,908986..909085,911144..911222,911851..911952,912522..912623,913441..913593,914216..914314,915070..915166,915822..915920,916460..916546,917150..917245,923220..923351,926435..926436))
location: region:901854-926436:-1
so has part: feature:926435-926436:-1:exon
so has part: feature:923220-923351:-1:exon
so has part: feature:917150-917245:-1:exon
so has part: feature:916460-916546:-1:exon
so has part: feature:915822-915920:-1:exon
so has part: feature:915070-915166:-1:exon
so has part: feature:914216-914314:-1:exon
so has part: feature:913441-913593:-1:exon
so has part: feature:912522-912623:-1:exon
so has part: feature:911851-911952:-1:exon
so has part: feature:911144-911222:-1:exon
so has part: feature:908986-909085:-1:exon
so has part: feature:908438-908519:-1:exon
so has part: feature:903994-904066:-1:exon
so has part: feature:903285-903458:-1:exon
so has part: feature:903103-903203:-1:exon
so has part: feature:901854-902003:-1:exon

XP_033374250.1
type: Protein
SIO_000068: ncbiprotein

position:901854:-1
position: 901854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926436:-1
position: 926436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926435-926436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923220-923351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:917150-917245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916460-916546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:915822-915920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915070-915166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914216-914314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913441-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912522-912623:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:911851-911952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911144-911222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:908986-909085:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:908438-908519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:903994-904066:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:903285-903458:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:903103-903203:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:901854-902003:-1:exon

SCAI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SCAI isoform X1
translation: MTELAIKEIMSSGGAEDDIPQAERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDVYTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLSETGAPLLEQGMIVGQLALADALIIGNCNNQVKFSELTIDMFRMLQALEREPMNLASQMNKPGMQESTEKPARRENPHKYLLYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPSGRSDSEGPYDFGGVLTNSNRDIINGDAIHKRNQSYKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLSPTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQDYLRKINRDIAQLLTHSRSIDQSFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRQETRNYPESYPQLPRDETVENPHLQKHILELASILDVRNVFLENTLDDY
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(901854..902003,903103..903203,903285..903458,903994..904066,908438..908519,908986..909085,911144..911222,911851..911952,912522..912623,913441..913593,914216..914314,915070..915166,915822..915920,916460..916546,917150..917245,923220..923351,926435..926436))
location: region:901854-926436:-1
so has part: feature:926435-926436:-1:exon
so has part: feature:923220-923351:-1:exon
so has part: feature:917150-917245:-1:exon
so has part: feature:916460-916546:-1:exon
so has part: feature:915822-915920:-1:exon
so has part: feature:915070-915166:-1:exon
so has part: feature:914216-914314:-1:exon
so has part: feature:913441-913593:-1:exon
so has part: feature:912522-912623:-1:exon
so has part: feature:911851-911952:-1:exon
so has part: feature:911144-911222:-1:exon
so has part: feature:908986-909085:-1:exon
so has part: feature:908438-908519:-1:exon
so has part: feature:903994-904066:-1:exon
so has part: feature:903285-903458:-1:exon
so has part: feature:903103-903203:-1:exon
so has part: feature:901854-902003:-1:exon

XP_015500426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:926435-926436:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923220-923351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:917150-917245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916460-916546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:915822-915920:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915070-915166:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914216-914314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913441-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912522-912623:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:911851-911952:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911144-911222:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:908986-909085:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:908438-908519:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:903994-904066:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:903285-903458:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:903103-903203:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:901854-902003:-1:exon

SCAI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SCAI isoform X2
translation: MSSGGAEDDIPQAERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDVYTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLSETGAPLLEQGMIVGQLALADALIIGNCNNQVKFSELTIDMFRMLQALEREPMNLASQMNKPGMQESTEKPARRENPHKYLLYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPSGRSDSEGPYDFGGVLTNSNRDIINGDAIHKRNQSYKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLSPTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQDYLRKINRDIAQLLTHSRSIDQSFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRQETRNYPESYPQLPRDETVENPHLQKHILELASILDVRNVFLENTLDDY
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(901854..902003,903103..903203,903285..903458,903994..904066,908438..908519,908986..909085,911144..911222,911851..911952,912522..912623,913441..913593,914216..914314,915070..915166,915822..915920,916460..916546,917150..917245,923220..923326))
location: region:901854-923326:-1
so has part: feature:923220-923326:-1:exon
so has part: feature:917150-917245:-1:exon
so has part: feature:916460-916546:-1:exon
so has part: feature:915822-915920:-1:exon
so has part: feature:915070-915166:-1:exon
so has part: feature:914216-914314:-1:exon
so has part: feature:913441-913593:-1:exon
so has part: feature:912522-912623:-1:exon
so has part: feature:911851-911952:-1:exon
so has part: feature:911144-911222:-1:exon
so has part: feature:908986-909085:-1:exon
so has part: feature:908438-908519:-1:exon
so has part: feature:903994-904066:-1:exon
so has part: feature:903285-903458:-1:exon
so has part: feature:903103-903203:-1:exon
so has part: feature:901854-902003:-1:exon

XP_015500429.1
type: Protein
SIO_000068: ncbiprotein

position:923326:-1
position: 923326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:923220-923326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:917150-917245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916460-916546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:915822-915920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:915070-915166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914216-914314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913441-913593:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:912522-912623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:911851-911952:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:911144-911222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:908986-909085:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:908438-908519:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:903994-904066:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:903285-903458:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:903103-903203:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:901854-902003:-1:exon

SCAI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SCAI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SCAI isoform X2
translation: MSSGGAEDDIPQAERKTVTDFCYLLDKSKQLFNGLRDLPQYGQKQWQSYFGRTFDVYTKLWKFQQQHRQVLDNRYGLKRWQIGEIASKIGQLYYHYYLRTSETSYLNEAFSFYSAIRQRSYYSQVNKEDRPELVVKKLRYYARFIVVCLLLNKMDVVKDLVKELSDEIEDYTHRFNTEDQVEWNLVLQEVAAFIEADPVMVLNDDNTIVITSNRLSETGAPLLEQGMIVGQLALADALIIGNCNNQVKFSELTIDMFRMLQALEREPMNLASQMNKPGMQESTEKPARRENPHKYLLYKPTFSQLYTFLAASFKELPANSVLLIYLSATGVFPSGRSDSEGPYDFGGVLTNSNRDIINGDAIHKRNQSYKEMHCLHPGDLYPFTRKPLFIIVDSSNSVAYKNFTNLFGQPLVCLLSPTAYPKALQDQSQRGSLFTLFLNNPLMAFLFVSGLSSMRRGLWEKCQDYLRKINRDIAQLLTHSRSIDQSFLQFFGDEFLRLLLTRFIFCSATMRMHKIFRQETRNYPESYPQLPRDETVENPHLQKHILELASILDVRNVFLENTLDDY
SIO_010081: SCAI
subclass of: SO_0000673
so part of: SCAI
location: complement(join(901854..902003,903103..903203,903285..903458,903994..904066,908438..908519,908986..909085,911144..911222,911851..911952,912522..912623,913441..913593,914216..914314,915070..915166,915822..915920,916460..916546,917150..917245,923220..923326))
location: region:901854-923326:-1
so has part: feature:923220-923326:-1:exon
so has part: feature:917150-917245:-1:exon
so has part: feature:916460-916546:-1:exon
so has part: feature:915822-915920:-1:exon
so has part: feature:915070-915166:-1:exon
so has part: feature:914216-914314:-1:exon
so has part: feature:913441-913593:-1:exon
so has part: feature:912522-912623:-1:exon
so has part: feature:911851-911952:-1:exon
so has part: feature:911144-911222:-1:exon
so has part: feature:908986-909085:-1:exon
so has part: feature:908438-908519:-1:exon
so has part: feature:903994-904066:-1:exon
so has part: feature:903285-903458:-1:exon
so has part: feature:903103-903203:-1:exon
so has part: feature:901854-902003:-1:exon

XP_015500430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:923220-923326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:917150-917245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916460-916546:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:915822-915920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:915070-915166:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914216-914314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913441-913593:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:912522-912623:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:911851-911952:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:911144-911222:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:908986-909085:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:908438-908519:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:903994-904066:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:903285-903458:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:903103-903203:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:901854-902003:-1:exon

RPL35
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: RPL35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 934935..936800
location: region:934935-936800:1
so has part: feature:934935-936800:1:exon
subclass of: SO_0000010

107212090
type: Gene
SIO_000068: ncbigene

position:934935:1
position: 934935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936800:1
position: 936800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:934935-936800:1:exon

RPL35
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RPL35
product: ribosomal protein L35
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_015644949.3
SIO_010081: RPL35
subclass of: SO_0000673
so part of: RPL35
location: join(934935..935040,935401..935537,935860..935941,936583..936800)
location: region:934935-936800:1
so has part: feature:934935-935040:1:exon
so has part: feature:935401-935537:1:exon
so has part: feature:935860-935941:1:exon
so has part: feature:936583-936800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:934935-935040:1:exon

position:935040:1
position: 935040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:935401-935537:1:exon

position:935401:1
position: 935401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935537:1
position: 935537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:935860-935941:1:exon

position:935860:1
position: 935860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935941:1
position: 935941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:936583-936800:1:exon

position:936583:1
position: 936583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL35
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RPL35
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L35
translation: MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPARKFAIKA
SIO_010081: RPL35
subclass of: SO_0000673
so part of: RPL35
location: join(935038..935040,935401..935537,935860..935941,936583..936732)
location: region:935038-936732:1
so has part: feature:935038-935040:1:exon
so has part: feature:935401-935537:1:exon
so has part: feature:935860-935941:1:exon
so has part: feature:936583-936732:1:exon

XP_015500435.1
type: Protein
SIO_000068: ncbiprotein

position:935038:1
position: 935038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936732:1
position: 936732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:935038-935040:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:935401-935537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:935860-935941:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:936583-936732:1:exon

OLFML2A
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: OLFML2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(942714..950163)
location: region:942714-950163:-1
so has part: feature:942714-950163:-1:exon
subclass of: SO_0000010

107212238
type: Gene
SIO_000068: ncbigene

position:942714:-1
position: 942714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950163:-1
position: 950163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:942714-950163:-1:exon

OLFML2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: OLFML2A
product: olfactomedin like 2A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_015645272.2
SIO_010081: OLFML2A
subclass of: SO_0000673
so part of: OLFML2A
location: complement(join(942714..944223,944457..944642,944799..945032,945145..945403,945585..945770,945876..945983,946102..946365,950061..950163))
location: region:942714-950163:-1
so has part: feature:950061-950163:-1:exon
so has part: feature:946102-946365:-1:exon
so has part: feature:945876-945983:-1:exon
so has part: feature:945585-945770:-1:exon
so has part: feature:945145-945403:-1:exon
so has part: feature:944799-945032:-1:exon
so has part: feature:944457-944642:-1:exon
so has part: feature:942714-944223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950061-950163:-1:exon

position:950061:-1
position: 950061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:946102-946365:-1:exon

position:946102:-1
position: 946102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946365:-1
position: 946365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:945876-945983:-1:exon

position:945876:-1
position: 945876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945983:-1
position: 945983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:945585-945770:-1:exon

position:945585:-1
position: 945585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945770:-1
position: 945770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:945145-945403:-1:exon

position:945145:-1
position: 945145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945403:-1
position: 945403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:944799-945032:-1:exon

position:944799:-1
position: 944799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945032:-1
position: 945032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:944457-944642:-1:exon

position:944457:-1
position: 944457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944642:-1
position: 944642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:942714-944223:-1:exon

position:944223:-1
position: 944223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OLFML2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: OLFML2A
product: olfactomedin like 2A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033518480.1
SIO_010081: OLFML2A
subclass of: SO_0000673
so part of: OLFML2A
location: complement(join(942714..944223,944457..944642,944799..945032,945145..945403,945585..945770,945876..945983,946102..949306,950061..950147))
location: region:942714-950147:-1
so has part: feature:950061-950147:-1:exon
so has part: feature:946102-949306:-1:exon
so has part: feature:945876-945983:-1:exon
so has part: feature:945585-945770:-1:exon
so has part: feature:945145-945403:-1:exon
so has part: feature:944799-945032:-1:exon
so has part: feature:944457-944642:-1:exon
so has part: feature:942714-944223:-1:exon

position:950147:-1
position: 950147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950061-950147:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946102-949306:-1:exon

position:949306:-1
position: 949306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:945876-945983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:945585-945770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:945145-945403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:944799-945032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:944457-944642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:942714-944223:-1:exon

OLFML2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: OLFML2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactomedin-like protein 2A isoform X2
translation: MRALLLPALLLPALAAVRGAATALGDVDQVRMTSEGSDCRCKCILRPLSKDACSRVRNGSARVEDFYTVETVSSGADCKCSCTAPPSSLNPCENEWKMEKLKKQAPELFKLQSMVDLLEGTLYSMDLMKVHSYISKVVAQMNTLEETIKTNLSRENDFMKESIQHLTDQMKRYENYSDIMISIKKELSNLGYQLLQKDAAAIPESKAQDTTGGREKEVGRYPSTRKALGDRAGTRAPKEKPLKPEKPKKENKARAGAQPTAKPKPLAQQQTVVRGITYYKVGQVGAAEGPAGSREGPVRGAVVSEQQEERGPPPPSAEGTPAQAGAQTETTVSSTTAAPSTALTPRSTARSPPGPVLGHGADSTGDPETPNRVKEVECEGTIKSVEPPMEHHSYGRNEGAWMKDPAAKDDRIYVTNYYYGNSLVEFRSLDNFKQGRWSNLYKLPYNWIGTGHVVYRGAFYYNRAFTKNIIKYDLKERYVAGWAQLHDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPSVDYDYSQQEVIVLSRLDPVDLSVRKETTWKTGLKRNTYGNCFIICGILYAVDTYSQKEGQISYAFDTHTDTEAELRLPFLNHYSFTTQVDYNPKEKVLYAWDNGHQMTYGLHFVV
SIO_010081: OLFML2A
subclass of: SO_0000673
so part of: OLFML2A
location: complement(join(943622..944223,944457..944642,944799..945032,945145..945403,945585..945770,945876..945983,946102..946365,950061..950126))
location: region:943622-950126:-1
so has part: feature:950061-950126:-1:exon
so has part: feature:946102-946365:-1:exon
so has part: feature:945876-945983:-1:exon
so has part: feature:945585-945770:-1:exon
so has part: feature:945145-945403:-1:exon
so has part: feature:944799-945032:-1:exon
so has part: feature:944457-944642:-1:exon
so has part: feature:943622-944223:-1:exon

XP_015500758.1
type: Protein
SIO_000068: ncbiprotein

position:943622:-1
position: 943622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950126:-1
position: 950126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950061-950126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946102-946365:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:945876-945983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:945585-945770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:945145-945403:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:944799-945032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:944457-944642:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:943622-944223:-1:exon

OLFML2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: OLFML2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactomedin-like protein 2A isoform X1
translation: MRAPWASSQSGWTGCSGLDNASHSLGHNREPQGQWEISGQAAVREVAVMLFWARQGPVGCLGGTPGSSPVLQALGDVDQVRMTSEGSDCRCKCILRPLSKDACSRVRNGSARVEDFYTVETVSSGADCKCSCTAPPSSLNPCENEWKMEKLKKQAPELFKLQSMVDLLEGTLYSMDLMKVHSYISKVVAQMNTLEETIKTNLSRENDFMKESIQHLTDQMKRYENYSDIMISIKKELSNLGYQLLQKDAAAIPESKAQDTTGGREKEVGRYPSTRKALGDRAGTRAPKEKPLKPEKPKKENKARAGAQPTAKPKPLAQQQTVVRGITYYKVGQVGAAEGPAGSREGPVRGAVVSEQQEERGPPPPSAEGTPAQAGAQTETTVSSTTAAPSTALTPRSTARSPPGPVLGHGADSTGDPETPNRVKEVECEGTIKSVEPPMEHHSYGRNEGAWMKDPAAKDDRIYVTNYYYGNSLVEFRSLDNFKQGRWSNLYKLPYNWIGTGHVVYRGAFYYNRAFTKNIIKYDLKERYVAGWAQLHDVVYEDTTPWKWRGHSDIDFAVDESGLWVIYPSVDYDYSQQEVIVLSRLDPVDLSVRKETTWKTGLKRNTYGNCFIICGILYAVDTYSQKEGQISYAFDTHTDTEAELRLPFLNHYSFTTQVDYNPKEKVLYAWDNGHQMTYGLHFVV
SIO_010081: OLFML2A
subclass of: SO_0000673
so part of: OLFML2A
location: complement(join(943622..944223,944457..944642,944799..945032,945145..945403,945585..945770,945876..945983,946102..946581))
location: region:943622-946581:-1
so has part: feature:946102-946581:-1:exon
so has part: feature:945876-945983:-1:exon
so has part: feature:945585-945770:-1:exon
so has part: feature:945145-945403:-1:exon
so has part: feature:944799-945032:-1:exon
so has part: feature:944457-944642:-1:exon
so has part: feature:943622-944223:-1:exon

XP_033374371.1
type: Protein
SIO_000068: ncbiprotein

position:946581:-1
position: 946581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946102-946581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:945876-945983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:945585-945770:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:945145-945403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:944799-945032:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:944457-944642:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:943622-944223:-1:exon

NR6A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: NR6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 963067..1026759
location: region:963067-1026759:1
so has part: feature:963067-1026759:1:exon
subclass of: SO_0000010

107212081
type: Gene
SIO_000068: ncbigene

position:963067:1
position: 963067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026759:1
position: 1026759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963067-1026759:1:exon

NR6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NR6A1
product: nuclear receptor subfamily 6 group A member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015644904.2
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(963067..963122,1007523..1007753,1011624..1011679,1013084..1013241,1014083..1014310,1014651..1014905,1018188..1018309,1019747..1019899,1020854..1026759)
location: region:963067-1026759:1
so has part: feature:963067-963122:1:exon
so has part: feature:1007523-1007753:1:exon
so has part: feature:1011624-1011679:1:exon
so has part: feature:1013084-1013241:1:exon
so has part: feature:1014083-1014310:1:exon
so has part: feature:1014651-1014905:1:exon
so has part: feature:1018188-1018309:1:exon
so has part: feature:1019747-1019899:1:exon
so has part: feature:1020854-1026759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963067-963122:1:exon

position:963122:1
position: 963122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1007523-1007753:1:exon

position:1007523:1
position: 1007523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007753:1
position: 1007753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1011624-1011679:1:exon

position:1011624:1
position: 1011624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1011679:1
position: 1011679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1013084-1013241:1:exon

position:1013084:1
position: 1013084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013241:1
position: 1013241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1014083-1014310:1:exon

position:1014083:1
position: 1014083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014310:1
position: 1014310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1014651-1014905:1:exon

position:1014651:1
position: 1014651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1014905:1
position: 1014905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1018188-1018309:1:exon

position:1018188:1
position: 1018188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1018309:1
position: 1018309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1019747-1019899:1:exon

position:1019747:1
position: 1019747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019899:1
position: 1019899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1020854-1026759:1:exon

position:1020854:1
position: 1020854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NR6A1
product: nuclear receptor subfamily 6 group A member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015644905.2
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(963067..963122,1007523..1007753,1011624..1011679,1013084..1013241,1014086..1014310,1014651..1014905,1018188..1018309,1019747..1019899,1020854..1026759)
location: region:963067-1026759:1
so has part: feature:963067-963122:1:exon
so has part: feature:1007523-1007753:1:exon
so has part: feature:1011624-1011679:1:exon
so has part: feature:1013084-1013241:1:exon
so has part: feature:1014086-1014310:1:exon
so has part: feature:1014651-1014905:1:exon
so has part: feature:1018188-1018309:1:exon
so has part: feature:1019747-1019899:1:exon
so has part: feature:1020854-1026759:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963067-963122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007523-1007753:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011624-1011679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013084-1013241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014086-1014310:1:exon

position:1014086:1
position: 1014086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1014651-1014905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1018188-1018309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1019747-1019899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1020854-1026759:1:exon

NR6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NR6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 6 group A member 1 isoform X1
translation: MSSSSPVLPMNSMGNERVDQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEGEANMSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSVELNGFAALRDQYLGTPVSTHYQYLPHLFSYSAHSALMAPQPRSLDPQSLSLISQLVCAEDLEPLGTPMLIEDGYKVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGDLADVTSKYSPSDDELHRFSEEGMEVMERLIYLFRKFNQLKVSNEEYACMKAINFLNQDIRGLTNASQLEQLNKRYWYVCQDFTEYKYPHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLFKAVLHSCKTSVSKE
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(963080..963122,1007523..1007753,1011624..1011679,1013084..1013241,1014083..1014310,1014651..1014905,1018188..1018309,1019747..1019899,1020854..1020942)
location: region:963080-1020942:1
so has part: feature:963080-963122:1:exon
so has part: feature:1007523-1007753:1:exon
so has part: feature:1011624-1011679:1:exon
so has part: feature:1013084-1013241:1:exon
so has part: feature:1014083-1014310:1:exon
so has part: feature:1014651-1014905:1:exon
so has part: feature:1018188-1018309:1:exon
so has part: feature:1019747-1019899:1:exon
so has part: feature:1020854-1020942:1:exon

XP_015500390.2
type: Protein
SIO_000068: ncbiprotein

position:963080:1
position: 963080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020942:1
position: 1020942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963080-963122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007523-1007753:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011624-1011679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013084-1013241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014083-1014310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014651-1014905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1018188-1018309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1019747-1019899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1020854-1020942:1:exon

NR6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NR6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 6 group A member 1 isoform X2
translation: MSSSSPVLPMNSMGNERVDQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEGEANMSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSRSVELNGFAALRDQYLGTPVSTHYQYLPHLFSYSAHSALMAPQPRSLDPQSLSLISQLVCAEDLEPLGTPMLIEDGYKVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGDLADVTSKYSPSDDELHRFSEEGMEVMERLIYLFRKFNQLKVSNEEYACMKAINFLNQDIRGLTNASQLEQLNKRYWYVCQDFTEYKYPHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLFKAVLHSCKTSVSKE
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(963080..963122,1007523..1007753,1011624..1011679,1013084..1013241,1014086..1014310,1014651..1014905,1018188..1018309,1019747..1019899,1020854..1020942)
location: region:963080-1020942:1
so has part: feature:963080-963122:1:exon
so has part: feature:1007523-1007753:1:exon
so has part: feature:1011624-1011679:1:exon
so has part: feature:1013084-1013241:1:exon
so has part: feature:1014086-1014310:1:exon
so has part: feature:1014651-1014905:1:exon
so has part: feature:1018188-1018309:1:exon
so has part: feature:1019747-1019899:1:exon
so has part: feature:1020854-1020942:1:exon

XP_015500391.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:963080-963122:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007523-1007753:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011624-1011679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013084-1013241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014086-1014310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014651-1014905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1018188-1018309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1019747-1019899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1020854-1020942:1:exon

LOC109022892
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC109022892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(980987..981853)
location: region:980987-981853:-1
so has part: feature:980987-981853:-1:exon
subclass of: SO_0000011

109022892
type: Gene
SIO_000068: ncbigene

position:980987:-1
position: 980987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:981853:-1
position: 981853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980987-981853:-1:exon

LOC109022892
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC109022892
product: uncharacterized LOC109022892
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_002002318.1
SIO_010081: LOC109022892
subclass of: SO_0000673
so part of: LOC109022892
location: complement(join(980987..981442,981762..981853))
location: region:980987-981853:-1
so has part: feature:981762-981853:-1:exon
so has part: feature:980987-981442:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:981762-981853:-1:exon

position:981762:-1
position: 981762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:980987-981442:-1:exon

position:981442:-1
position: 981442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NR6A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NR6A1
product: nuclear receptor subfamily 6 group A member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015644906.3
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(1000826..1000912,1007523..1007753,1011624..1011679,1013084..1013241,1014083..1014310,1014651..1014905,1018188..1018309,1019747..1019899,1020854..1026759)
location: region:1000826-1026759:1
so has part: feature:1000826-1000912:1:exon
so has part: feature:1007523-1007753:1:exon
so has part: feature:1011624-1011679:1:exon
so has part: feature:1013084-1013241:1:exon
so has part: feature:1014083-1014310:1:exon
so has part: feature:1014651-1014905:1:exon
so has part: feature:1018188-1018309:1:exon
so has part: feature:1019747-1019899:1:exon
so has part: feature:1020854-1026759:1:exon

position:1000826:1
position: 1000826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000826-1000912:1:exon

position:1000912:1
position: 1000912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1007523-1007753:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011624-1011679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013084-1013241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014083-1014310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014651-1014905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1018188-1018309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1019747-1019899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1020854-1026759:1:exon

NR6A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NR6A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 6 group A member 1 isoform X3
translation: MKRDSTCMEDERVDQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCVMSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQISEEEIERIMSGQEFEGEANMSWSNNGDSDHSSPGNGVSESNQPSPVSTPSSSRSVELNGFAALRDQYLGTPVSTHYQYLPHLFSYSAHSALMAPQPRSLDPQSLSLISQLVCAEDLEPLGTPMLIEDGYKVTQAELFALLCRLADELLFRQIAWIKKLPFFCELSIKDYTCLLSSTWQELILLSSLTVYSKQIFGDLADVTSKYSPSDDELHRFSEEGMEVMERLIYLFRKFNQLKVSNEEYACMKAINFLNQDIRGLTNASQLEQLNKRYWYVCQDFTEYKYPHQPNRFPDLMMCLPEIRYIAGKMVNVPLEQLPLLFKAVLHSCKTSVSKE
SIO_010081: NR6A1
subclass of: SO_0000673
so part of: NR6A1
location: join(1000885..1000912,1007523..1007753,1011624..1011679,1013084..1013241,1014083..1014310,1014651..1014905,1018188..1018309,1019747..1019899,1020854..1020942)
location: region:1000885-1020942:1
so has part: feature:1000885-1000912:1:exon
so has part: feature:1007523-1007753:1:exon
so has part: feature:1011624-1011679:1:exon
so has part: feature:1013084-1013241:1:exon
so has part: feature:1014083-1014310:1:exon
so has part: feature:1014651-1014905:1:exon
so has part: feature:1018188-1018309:1:exon
so has part: feature:1019747-1019899:1:exon
so has part: feature:1020854-1020942:1:exon

XP_015500392.1
type: Protein
SIO_000068: ncbiprotein

position:1000885:1
position: 1000885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1000885-1000912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1007523-1007753:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011624-1011679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013084-1013241:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014083-1014310:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014651-1014905:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1018188-1018309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1019747-1019899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1020854-1020942:1:exon

NR5A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: NR5A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1030817..1050194
location: region:1030817-1050194:1
so has part: feature:1030817-1050194:1:exon
subclass of: SO_0000010

107211946
type: Gene
SIO_000068: ncbigene

position:1030817:1
position: 1030817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050194:1
position: 1050194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030817-1050194:1:exon

NR5A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NR5A1
product: nuclear receptor subfamily 5 group A member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015644570.2
SIO_010081: NR5A1
subclass of: SO_0000673
so part of: NR5A1
location: join(1030817..1031039,1033032..1033147,1033535..1033676,1037277..1037917,1044555..1044674,1045150..1045297,1048315..1050194)
location: region:1030817-1050194:1
so has part: feature:1030817-1031039:1:exon
so has part: feature:1033032-1033147:1:exon
so has part: feature:1033535-1033676:1:exon
so has part: feature:1037277-1037917:1:exon
so has part: feature:1044555-1044674:1:exon
so has part: feature:1045150-1045297:1:exon
so has part: feature:1048315-1050194:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1030817-1031039:1:exon

position:1031039:1
position: 1031039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1033032-1033147:1:exon

position:1033032:1
position: 1033032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033147:1
position: 1033147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1033535-1033676:1:exon

position:1033535:1
position: 1033535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033676:1
position: 1033676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1037277-1037917:1:exon

position:1037277:1
position: 1037277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037917:1
position: 1037917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1044555-1044674:1:exon

position:1044555:1
position: 1044555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044674:1
position: 1044674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1045150-1045297:1:exon

position:1045150:1
position: 1045150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045297:1
position: 1045297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1048315-1050194:1:exon

position:1048315:1
position: 1048315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR5A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NR5A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steroidogenic factor 1
translation: MDYSYDEDLDELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKHYTCTESQSCKIDKTQRKRCPYCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKALIRANGFKLETVPQIMSPVQSDYSLSSTIHSIHAMSKTLPPNPAALTPADYERSPYGTPSLGMTVPGHAPLPGYHYPSFPNRTIKSEYPDHYTNAHEAVPAYVYPETYPSSSPPDIPEVILKLLQLEPEEAQVKARILSCLQQEQGKGRHEKLTTFGLMCKMADQTLFSIVEWARSCIFFKELEVGDQMKLLQNCWSELLVFDHIYRQLQHGKEHSVLLVTGQEVDMSAIAAQAGSILNTLVLRAQELVLHLHSLQVDRHEFVCLKFLILFSLDVKYLENHTLAKDAQEKANAALLEYTVCHYPHSTDKFRQLLLWLAEVRALSLQAEEYLYHKHLSGEVPCNNLLIEMLHAKRT
SIO_010081: NR5A1
subclass of: SO_0000673
so part of: NR5A1
location: join(1033046..1033147,1033535..1033676,1037277..1037917,1044555..1044674,1045150..1045297,1048315..1048562)
location: region:1033046-1048562:1
so has part: feature:1033046-1033147:1:exon
so has part: feature:1033535-1033676:1:exon
so has part: feature:1037277-1037917:1:exon
so has part: feature:1044555-1044674:1:exon
so has part: feature:1045150-1045297:1:exon
so has part: feature:1048315-1048562:1:exon

XP_015500056.2
type: Protein
SIO_000068: ncbiprotein

position:1033046:1
position: 1033046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1048562:1
position: 1048562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1033046-1033147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1033535-1033676:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1037277-1037917:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1044555-1044674:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1045150-1045297:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1048315-1048562:1:exon

ADGRD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ADGRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1053130..1072177)
location: region:1053130-1072177:-1
so has part: feature:1053130-1072177:-1:exon
subclass of: SO_0000010

107211940
type: Gene
SIO_000068: ncbigene

position:1053130:-1
position: 1053130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072177:-1
position: 1072177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053130-1072177:-1:exon

ADGRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ADGRD2
product: adhesion G protein-coupled receptor D2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033518477.1
SIO_010081: ADGRD2
subclass of: SO_0000673
so part of: ADGRD2
location: complement(join(1053130..1053346,1054305..1054335,1055880..1055938,1056409..1056550,1056869..1056922,1057128..1057169,1060444..1060564,1061482..1061597,1062178..1062311,1063074..1063227,1063413..1063515,1064167..1064270,1064370..1064496,1065570..1065625,1065890..1065995,1066550..1066670,1066938..1067072,1067459..1067570,1068824..1069105,1069483..1069568,1070052..1070150,1070307..1070960,1071107..1071337,1071955..1072015,1072106..1072177))
location: region:1053130-1072177:-1
so has part: feature:1072106-1072177:-1:exon
so has part: feature:1071955-1072015:-1:exon
so has part: feature:1071107-1071337:-1:exon
so has part: feature:1070307-1070960:-1:exon
so has part: feature:1070052-1070150:-1:exon
so has part: feature:1069483-1069568:-1:exon
so has part: feature:1068824-1069105:-1:exon
so has part: feature:1067459-1067570:-1:exon
so has part: feature:1066938-1067072:-1:exon
so has part: feature:1066550-1066670:-1:exon
so has part: feature:1065890-1065995:-1:exon
so has part: feature:1065570-1065625:-1:exon
so has part: feature:1064370-1064496:-1:exon
so has part: feature:1064167-1064270:-1:exon
so has part: feature:1063413-1063515:-1:exon
so has part: feature:1063074-1063227:-1:exon
so has part: feature:1062178-1062311:-1:exon
so has part: feature:1061482-1061597:-1:exon
so has part: feature:1060444-1060564:-1:exon
so has part: feature:1057128-1057169:-1:exon
so has part: feature:1056869-1056922:-1:exon
so has part: feature:1056409-1056550:-1:exon
so has part: feature:1055880-1055938:-1:exon
so has part: feature:1054305-1054335:-1:exon
so has part: feature:1053130-1053346:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1072106-1072177:-1:exon

position:1072106:-1
position: 1072106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1071955-1072015:-1:exon

position:1071955:-1
position: 1071955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072015:-1
position: 1072015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1071107-1071337:-1:exon

position:1071107:-1
position: 1071107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071337:-1
position: 1071337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1070307-1070960:-1:exon

position:1070307:-1
position: 1070307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070960:-1
position: 1070960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1070052-1070150:-1:exon

position:1070052:-1
position: 1070052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070150:-1
position: 1070150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1069483-1069568:-1:exon

position:1069483:-1
position: 1069483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069568:-1
position: 1069568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1068824-1069105:-1:exon

position:1068824:-1
position: 1068824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069105:-1
position: 1069105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1067459-1067570:-1:exon

position:1067459:-1
position: 1067459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067570:-1
position: 1067570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1066938-1067072:-1:exon

position:1066938:-1
position: 1066938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067072:-1
position: 1067072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1066550-1066670:-1:exon

position:1066550:-1
position: 1066550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066670:-1
position: 1066670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1065890-1065995:-1:exon

position:1065890:-1
position: 1065890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065995:-1
position: 1065995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1065570-1065625:-1:exon

position:1065570:-1
position: 1065570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065625:-1
position: 1065625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1064370-1064496:-1:exon

position:1064370:-1
position: 1064370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064496:-1
position: 1064496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1064167-1064270:-1:exon

position:1064167:-1
position: 1064167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064270:-1
position: 1064270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1063413-1063515:-1:exon

position:1063413:-1
position: 1063413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063515:-1
position: 1063515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1063074-1063227:-1:exon

position:1063074:-1
position: 1063074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063227:-1
position: 1063227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1062178-1062311:-1:exon

position:1062178:-1
position: 1062178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062311:-1
position: 1062311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1061482-1061597:-1:exon

position:1061482:-1
position: 1061482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061597:-1
position: 1061597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1060444-1060564:-1:exon

position:1060444:-1
position: 1060444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060564:-1
position: 1060564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1057128-1057169:-1:exon

position:1057128:-1
position: 1057128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057169:-1
position: 1057169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1056869-1056922:-1:exon

position:1056869:-1
position: 1056869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056922:-1
position: 1056922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1056409-1056550:-1:exon

position:1056409:-1
position: 1056409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056550:-1
position: 1056550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1055880-1055938:-1:exon

position:1055880:-1
position: 1055880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1055938:-1
position: 1055938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1054305-1054335:-1:exon

position:1054305:-1
position: 1054305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054335:-1
position: 1054335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1053130-1053346:-1:exon

position:1053346:-1
position: 1053346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADGRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ADGRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor D2
translation: MFRRDLRPDSWFFSFLVGLSRSLLAFAVLAKNQTSKGFAPVIIETPRHTYEYVATALDWWQADRYCEQRFAQLLFEPQDTEQGSFSKLLQSHHITGSVWLKEKDSVLHKTKRRRGHTVPVLVFRDKTDTKYVKVLSDFPALPAVTACAHLQWDTRTQEIATIFSYAVPAFINEFQLRGFVDEEGFVRFALIVHGHHSPYLPVFRADGQWHHFCVTWQQENGTWAIYADGKRRASASGLCSAGPSAPQAIFGQGTFIIGQDQDSLGGTFSAKESFSGNITDLHIWQKVLSSEQVEKVRSCWVTEQDLVFGWSSNALEVESTIQAVTTQLLCPGPVEECRVLEVGSSGFSYASCLQTLPFICLYSKDAYWQLKRAQLESSHSLASCVNTLAVRTVIPDSVFTSDVQDMNLSVALDALDILATVLREGEVPVLDPSDLLAVLQLLKQVSHVEIQEGDELEMLEQLGQYYMEVTELILEEQNTGTWSSVSQVIRGPMAVVELCDRMVSLLVPLLTPERTKITIQHGNIGVEVRELELSEQELSGEAYVVQSPEKDRHDFIEVPVEEMQRLKSRGLHRVTVKNMWFGYGSLQRCLSSSGTGAVSQDKAASDGGQKYLSTTVGTAVISSTLLGDYQEISTSVRYRLQHRVQDLPNTLVGPICAFWNFSLSPDAGGMWSTAGCSVVMSLPDSTACFCNHTTNFAVLLQVYEMERTTKEELTLQTLTFIGCGISFFALIVTFILFLVVRVPKSERTTVHKNLIFALAAGEALLMFSELAKTNQVLCFMVTAFLHLFFMAAFSWMLVEGLLLWSKVVAVNMSEDRRMKFYCVTGWGLPVLIVGVTLATSFNKYVAANHCWLNVQTNVIWAFVGPVLFILAVNTFVLLRVVMVTVASARRRSKMLTPNSSLENQIGAQIWATAKPVLVLLPVLGLTWVCGVLVHLGIVWAYVFTVLNSLQGLYIFLVYAIYNSEVRNAIQRMKDKKKALSFTNCSHPINYLSSPRNTTSWETGKPSPAAESALPSPVQKEPPVKNITNKGNFGARIPIGISSIMSPERPAIELTAFKCSVSKQGILRLFSRRCHPEAVQLSSPHWTHEKGRNGGIQE
SIO_010081: ADGRD2
subclass of: SO_0000673
so part of: ADGRD2
location: complement(join(1053231..1053346,1054305..1054335,1055880..1055938,1056409..1056550,1056869..1056922,1057128..1057169,1060444..1060564,1061482..1061597,1062178..1062311,1063074..1063227,1063413..1063515,1064167..1064270,1064370..1064496,1065570..1065625,1065890..1065995,1066550..1066670,1066938..1067072,1067459..1067570,1068824..1069105,1069483..1069568,1070052..1070150,1070307..1070960,1071107..1071337,1071955..1072015,1072106..1072153))
location: region:1053231-1072153:-1
so has part: feature:1072106-1072153:-1:exon
so has part: feature:1071955-1072015:-1:exon
so has part: feature:1071107-1071337:-1:exon
so has part: feature:1070307-1070960:-1:exon
so has part: feature:1070052-1070150:-1:exon
so has part: feature:1069483-1069568:-1:exon
so has part: feature:1068824-1069105:-1:exon
so has part: feature:1067459-1067570:-1:exon
so has part: feature:1066938-1067072:-1:exon
so has part: feature:1066550-1066670:-1:exon
so has part: feature:1065890-1065995:-1:exon
so has part: feature:1065570-1065625:-1:exon
so has part: feature:1064370-1064496:-1:exon
so has part: feature:1064167-1064270:-1:exon
so has part: feature:1063413-1063515:-1:exon
so has part: feature:1063074-1063227:-1:exon
so has part: feature:1062178-1062311:-1:exon
so has part: feature:1061482-1061597:-1:exon
so has part: feature:1060444-1060564:-1:exon
so has part: feature:1057128-1057169:-1:exon
so has part: feature:1056869-1056922:-1:exon
so has part: feature:1056409-1056550:-1:exon
so has part: feature:1055880-1055938:-1:exon
so has part: feature:1054305-1054335:-1:exon
so has part: feature:1053231-1053346:-1:exon

XP_033374368.1
type: Protein
SIO_000068: ncbiprotein

position:1053231:-1
position: 1053231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072153:-1
position: 1072153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072106-1072153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1071955-1072015:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1071107-1071337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070307-1070960:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070052-1070150:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1069483-1069568:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1068824-1069105:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1067459-1067570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1066938-1067072:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1066550-1066670:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1065890-1065995:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1065570-1065625:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1064370-1064496:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1064167-1064270:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1063413-1063515:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1063074-1063227:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1062178-1062311:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1061482-1061597:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1060444-1060564:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1057128-1057169:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1056869-1056922:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1056409-1056550:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1055880-1055938:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1054305-1054335:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1053231-1053346:-1:exon

PSMB7
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PSMB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1082382..1101838
location: region:1082382-1101838:1
so has part: feature:1082382-1101838:1:exon
subclass of: SO_0000010

107211922
type: Gene
SIO_000068: ncbigene

position:1082382:1
position: 1082382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101838:1
position: 1101838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082382-1101838:1:exon

PSMB7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PSMB7
product: proteasome 20S subunit beta 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_019008423.2
SIO_010081: PSMB7
subclass of: SO_0000673
so part of: PSMB7
location: join(1082382..1082498,1082639..1082736,1083033..1083173,1083743..1083858,1089842..1089900,1101071..1101222,1101667..1101838)
location: region:1082382-1101838:1
so has part: feature:1082382-1082498:1:exon
so has part: feature:1082639-1082736:1:exon
so has part: feature:1083033-1083173:1:exon
so has part: feature:1083743-1083858:1:exon
so has part: feature:1089842-1089900:1:exon
so has part: feature:1101071-1101222:1:exon
so has part: feature:1101667-1101838:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1082382-1082498:1:exon

position:1082498:1
position: 1082498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1082639-1082736:1:exon

position:1082639:1
position: 1082639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082736:1
position: 1082736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1083033-1083173:1:exon

position:1083033:1
position: 1083033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083173:1
position: 1083173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1083743-1083858:1:exon

position:1083743:1
position: 1083743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083858:1
position: 1083858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1089842-1089900:1:exon

position:1089842:1
position: 1089842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089900:1
position: 1089900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1101071-1101222:1:exon

position:1101071:1
position: 1101071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101222:1
position: 1101222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1101667-1101838:1:exon

position:1101667:1
position: 1101667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMB7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PSMB7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-7
translation: MVVADKNCSKIHFISPNIYCCGAGTAADTEMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIHPHGSTDKLPYVTMGSGSLAAMAVFEDKYKPDMEEEEAKQLVRDAIAAGIFNDLGSGSNIDICVISKNKLDFLRPYDVANRKGDRFGRYKCEKGTTAVLTENVAHLELEVLDETVQTMDTS
SIO_010081: PSMB7
subclass of: SO_0000673
so part of: PSMB7
location: join(1082681..1082736,1083033..1083173,1083743..1083858,1089842..1089900,1101071..1101222,1101667..1101778)
location: region:1082681-1101778:1
so has part: feature:1082681-1082736:1:exon
so has part: feature:1083033-1083173:1:exon
so has part: feature:1083743-1083858:1:exon
so has part: feature:1089842-1089900:1:exon
so has part: feature:1101071-1101222:1:exon
so has part: feature:1101667-1101778:1:exon

XP_018863968.1
type: Protein
SIO_000068: ncbiprotein

position:1082681:1
position: 1082681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101778:1
position: 1101778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1082681-1082736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1083033-1083173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1083743-1083858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1089842-1089900:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1101071-1101222:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101667-1101778:1:exon

NEK6
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: NEK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1102907..1132014)
location: region:1102907-1132014:-1
so has part: feature:1102907-1132014:-1:exon
subclass of: SO_0000010

107211951
type: Gene
SIO_000068: ncbigene

position:1102907:-1
position: 1102907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132014:-1
position: 1132014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102907-1132014:-1:exon

NEK6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NEK6
product: NIMA related kinase 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_033518548.1
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1102907..1104336,1107047..1107160,1110830..1110924,1117737..1117844,1119094..1119202,1122374..1122484,1123591..1123653,1124546..1124686,1131865..1132014))
location: region:1102907-1132014:-1
so has part: feature:1131865-1132014:-1:exon
so has part: feature:1124546-1124686:-1:exon
so has part: feature:1123591-1123653:-1:exon
so has part: feature:1122374-1122484:-1:exon
so has part: feature:1119094-1119202:-1:exon
so has part: feature:1117737-1117844:-1:exon
so has part: feature:1110830-1110924:-1:exon
so has part: feature:1107047-1107160:-1:exon
so has part: feature:1102907-1104336:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1131865-1132014:-1:exon

position:1131865:-1
position: 1131865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1124546-1124686:-1:exon

position:1124546:-1
position: 1124546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124686:-1
position: 1124686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1123591-1123653:-1:exon

position:1123591:-1
position: 1123591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1123653:-1
position: 1123653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1122374-1122484:-1:exon

position:1122374:-1
position: 1122374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1122484:-1
position: 1122484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1119094-1119202:-1:exon

position:1119094:-1
position: 1119094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119202:-1
position: 1119202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1117737-1117844:-1:exon

position:1117737:-1
position: 1117737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117844:-1
position: 1117844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1110830-1110924:-1:exon

position:1110830:-1
position: 1110830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110924:-1
position: 1110924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1107047-1107160:-1:exon

position:1107047:-1
position: 1107047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107160:-1
position: 1107160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1102907-1104336:-1:exon

position:1104336:-1
position: 1104336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEK6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NEK6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek6
translation: MEGQHNHPHHLGDQNNPLCKLPGQEFQHDPQRHLTSYPYRCTLADFQIEKKIGRGQFSEVYKATCLLDRKPVALKKVQIFEMMDAKARQDCIKEIDLLKQLNHPNIIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPAEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMHVWTSST
SIO_010081: NEK6
subclass of: SO_0000673
so part of: NEK6
location: complement(join(1104226..1104336,1107047..1107160,1110830..1110924,1117737..1117844,1119094..1119202,1122374..1122484,1123591..1123653,1124546..1124686,1131865..1131957))
location: region:1104226-1131957:-1
so has part: feature:1131865-1131957:-1:exon
so has part: feature:1124546-1124686:-1:exon
so has part: feature:1123591-1123653:-1:exon
so has part: feature:1122374-1122484:-1:exon
so has part: feature:1119094-1119202:-1:exon
so has part: feature:1117737-1117844:-1:exon
so has part: feature:1110830-1110924:-1:exon
so has part: feature:1107047-1107160:-1:exon
so has part: feature:1104226-1104336:-1:exon

XP_033374439.1
type: Protein
SIO_000068: ncbiprotein

position:1104226:-1
position: 1104226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131957:-1
position: 1131957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131865-1131957:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124546-1124686:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1123591-1123653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1122374-1122484:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119094-1119202:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1117737-1117844:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1110830-1110924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1107047-1107160:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1104226-1104336:-1:exon

LHX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1243159..1265508)
location: region:1243159-1265508:-1
so has part: feature:1243159-1265508:-1:exon
subclass of: SO_0000010

107211948
type: Gene
SIO_000068: ncbigene

position:1243159:-1
position: 1243159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1265508:-1
position: 1265508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243159-1265508:-1:exon

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LHX2
product: LIM homeobox 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015644573.3
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1243159..1246132,1252590..1252795,1261314..1261696,1262333..1262538,1265281..1265508))
location: region:1243159-1265508:-1
so has part: feature:1265281-1265508:-1:exon
so has part: feature:1262333-1262538:-1:exon
so has part: feature:1261314-1261696:-1:exon
so has part: feature:1252590-1252795:-1:exon
so has part: feature:1243159-1246132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1265281-1265508:-1:exon

position:1265281:-1
position: 1265281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1262333-1262538:-1:exon

position:1262333:-1
position: 1262333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1262538:-1
position: 1262538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1261314-1261696:-1:exon

position:1261314:-1
position: 1261314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1261696:-1
position: 1261696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1252590-1252795:-1:exon

position:1252590:-1
position: 1252590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252795:-1
position: 1252795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1243159-1246132:-1:exon

position:1246132:-1
position: 1246132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LHX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LHX2
product: LIM homeobox 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015644574.1
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1245674..1246132,1252590..1252795,1261314..1261696,1262333..1262535,1265281..1265508))
location: region:1245674-1265508:-1
so has part: feature:1265281-1265508:-1:exon
so has part: feature:1262333-1262535:-1:exon
so has part: feature:1261314-1261696:-1:exon
so has part: feature:1252590-1252795:-1:exon
so has part: feature:1245674-1246132:-1:exon

position:1245674:-1
position: 1245674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265281-1265508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1262333-1262535:-1:exon

position:1262535:-1
position: 1262535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1261314-1261696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1252590-1252795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245674-1246132:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X2
translation: MHGGGLRLMQVLGSCRDPDNCQQQQQRGPSSSASSAMLFHSLSGSEMHGVIDEMDRRTKSEAPAISSAIDRGETETTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1245845..1246132,1252590..1252795,1261314..1261696,1262333..1262535,1265281..1265508))
location: region:1245845-1265508:-1
so has part: feature:1265281-1265508:-1:exon
so has part: feature:1262333-1262535:-1:exon
so has part: feature:1261314-1261696:-1:exon
so has part: feature:1252590-1252795:-1:exon
so has part: feature:1245845-1246132:-1:exon

XP_015500060.1
type: Protein
SIO_000068: ncbiprotein

position:1245845:-1
position: 1245845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1265281-1265508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1262333-1262535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1261314-1261696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1252590-1252795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245845-1246132:-1:exon

LHX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LHX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM/homeobox protein Lhx2 isoform X1
translation: MHGGGLRLMQVLGSCRDPDNCQQQQQRGPSSSASSAMLFHSLSGSEMHGVIDEMDRRTKSEAPAISSAIDRGETETQTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMKDNLVYCRLHFETLIQGEYQVHFNHSDVAAGKGPALGAGSANTLGLPYYNGVGTVQKGRPRKRKSPGPGADLAAYNAALSCNENDGDHLDRDQQYPSNQKTKRMRTSFKHHQLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGVDKTSDSTLQAGTPSGPASEISNASMSPSSTPTTLTDLTNPTMPTVTSVLTSVPGSLEVHESRSPSQTTLTNLF
SIO_010081: LHX2
subclass of: SO_0000673
so part of: LHX2
location: complement(join(1245845..1246132,1252590..1252795,1261314..1261696,1262333..1262538,1265281..1265508))
location: region:1245845-1265508:-1
so has part: feature:1265281-1265508:-1:exon
so has part: feature:1262333-1262538:-1:exon
so has part: feature:1261314-1261696:-1:exon
so has part: feature:1252590-1252795:-1:exon
so has part: feature:1245845-1246132:-1:exon

XP_015500059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1265281-1265508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1262333-1262538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1261314-1261696:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1252590-1252795:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1245845-1246132:-1:exon

DENND1A
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1293943..1447996
location: region:1293943-1447996:1
so has part: feature:1293943-1447996:1:exon
subclass of: SO_0000010

107211941
type: Gene
SIO_000068: ncbigene

position:1293943:1
position: 1293943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447996:1
position: 1447996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293943-1447996:1:exon

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND1A
product: DENN domain containing 1A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019008418.2
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1293943..1294091,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1432436..1432495,1436740..1436828,1441058..1441186,1443430..1443685,1444531..1447996)
location: region:1293943-1447996:1
so has part: feature:1293943-1294091:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1432436-1432495:1:exon
so has part: feature:1436740-1436828:1:exon
so has part: feature:1441058-1441186:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1447996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1293943-1294091:1:exon

position:1294091:1
position: 1294091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

position:1299801:1
position: 1299801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299871:1
position: 1299871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

position:1324755:1
position: 1324755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324798:1
position: 1324798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

position:1339610:1
position: 1339610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1339659:1
position: 1339659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

position:1342469:1
position: 1342469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342588:1
position: 1342588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

position:1359781:1
position: 1359781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359850:1
position: 1359850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

position:1360367:1
position: 1360367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360447:1
position: 1360447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

position:1362516:1
position: 1362516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362569:1
position: 1362569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

position:1366152:1
position: 1366152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366262:1
position: 1366262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

position:1370071:1
position: 1370071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1370171:1
position: 1370171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

position:1375845:1
position: 1375845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375890:1
position: 1375890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

position:1384578:1
position: 1384578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384679:1
position: 1384679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

position:1390739:1
position: 1390739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390864:1
position: 1390864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

position:1412977:1
position: 1412977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413078:1
position: 1413078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

position:1413598:1
position: 1413598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413685:1
position: 1413685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

position:1414213:1
position: 1414213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414253:1
position: 1414253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

position:1415154:1
position: 1415154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415225:1
position: 1415225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

position:1416292:1
position: 1416292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416348:1
position: 1416348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

position:1421233:1
position: 1421233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421364:1
position: 1421364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1432436-1432495:1:exon

position:1432436:1
position: 1432436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1432495:1
position: 1432495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1436740-1436828:1:exon

position:1436740:1
position: 1436740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1436828:1
position: 1436828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1441058-1441186:1:exon

position:1441058:1
position: 1441058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441186:1
position: 1441186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1443430-1443685:1:exon

position:1443430:1
position: 1443430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443685:1
position: 1443685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1444531-1447996:1:exon

position:1444531:1
position: 1444531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X5
translation: MGSRIKQNPETTFEVYAEVTHSGISCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDVAENGCSAVPEEPLPRTAPSPLVEKKDPKLREDRRPITVHFGQQHRLRPPRPPPPKIQRSSRPVRPPRPHVVKRPKSNIGVEGRRTSVPSPEHLVKPMRHYTVFLSEDSSDDEFQQEEDPVSGFSENFFFSAPFEWPQPYRALKESDSADGEDAGSPEKAREPLPPSPLLSSKASEVNLLEDIFPNLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERNRIVPSMKLSHAYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNVAPITRRPQSRDSGLAPAEKEESSPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAAAGSAEILTPHGRSHLVPDLIPEPFGAGNVSLDAEVQQCVNSSSRPSQLLCGAAGAAEMLQPVRVKTEGAGNESELLLSLLDPLRTTGWPGSALPGSAPLGSAPAPTLGALPSDFVPPPAAPFAQPLGYAAPAPPPFLQPSPNPFTQTLPGALPVSLVRPPRGSFTPSLGHAYSSSFITPTAGFYTPQRPQSHMATLSMPNLFSQAPAVPAAGSLLLQTHSPSPTSSLQPVCLGGPSKPRTLQVGQPSTKVDPKQALALLASEPPLVPARPAKGLESLLLSSKSEETKDPFEDLLKKSKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1294075..1294091,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1432436..1432495,1436740..1436828,1441058..1441186,1443430..1443685,1444531..1445832)
location: region:1294075-1445832:1
so has part: feature:1294075-1294091:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1432436-1432495:1:exon
so has part: feature:1436740-1436828:1:exon
so has part: feature:1441058-1441186:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1445832:1:exon

XP_018863963.1
type: Protein
SIO_000068: ncbiprotein

position:1294075:1
position: 1294075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445832:1
position: 1445832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294075-1294091:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1432436-1432495:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1436740-1436828:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1441058-1441186:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1443430-1443685:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1444531-1445832:1:exon

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND1A
product: DENN domain containing 1A, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033518423.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1294514..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1422552..1422613,1425733..1426040)
location: region:1294514-1426040:1
so has part: feature:1294514-1295239:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1422552-1422613:1:exon
so has part: feature:1425733-1426040:1:exon

position:1294514:1
position: 1294514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426040:1
position: 1426040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294514-1295239:1:exon

position:1295239:1
position: 1295239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1422552-1422613:1:exon

position:1422552:1
position: 1422552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422613:1
position: 1422613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1425733-1426040:1:exon

position:1425733:1
position: 1425733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND1A
product: DENN domain containing 1A, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033518422.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1294525..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1443430..1443685,1444531..1444640)
location: region:1294525-1444640:1
so has part: feature:1294525-1295239:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1444640:1:exon

position:1294525:1
position: 1294525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444640:1
position: 1444640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND1A
product: DENN domain containing 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033518416.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1294531..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1432436..1432495,1436740..1436828,1441058..1441186,1443430..1443685,1444531..1447996)
location: region:1294531-1447996:1
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position:1294531:1
position: 1294531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND1A
product: DENN domain containing 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033518417.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1294531..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1432439..1432495,1436740..1436828,1441058..1441186,1443430..1443685,1444531..1447996)
location: region:1294531-1447996:1
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position:1432439:1
position: 1432439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND1A
product: DENN domain containing 1A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033518419.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1294535..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1432436..1432495,1436740..1436828,1443430..1443685,1444531..1447996)
location: region:1294535-1447996:1
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position:1294535:1
position: 1294535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND1A
product: DENN domain containing 1A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033518418.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1294535..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1436740..1436828,1441058..1441186,1443430..1443685,1444531..1447996)
location: region:1294535-1447996:1
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urn:…
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DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND1A
product: DENN domain containing 1A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033518420.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1294538..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1436740..1436828,1443430..1443685,1444531..1447996)
location: region:1294538-1447996:1
so has part: feature:1294538-1295239:1:exon
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so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1436740-1436828:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1447996:1:exon

position:1294538:1
position: 1294538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294538-1295239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1436740-1436828:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1443430-1443685:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1444531-1447996:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X1
translation: MTHLHVPKPIGWIDENISFQACVLGKCKRIMSVCNDSTVAIGLFQKGINVPSLLPSLSILQNPETTFEVYAEVTHSGISCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDVAENGCSAVPEEPLPRTAPSPLVEKKDPKLREDRRPITVHFGQQHRLRPPRPPPPKIQRSSRPVRPPRPHVVKRPKSNIGVEGRRTSVPSPEHLVKPMRHYTVFLSEDSSDDEFQQEEDPVSGFSENFFFSAPFEWPQPYRALKESDSADGEDAGSPEKAREPLPPSPLLSSKASEVNLLEDIFPNLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERNRIVPSMKLSHAYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNVAPITRRPQSRDSGLAPAEKEESSPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAAAGSAEILTPHGRSHLVPDLIPEPFGAGNVSLDAEVQQCVNSSSRPSQLLCGAAGAAEMLQPVRVKTEGAGNESELLLSLLDPLRTTGWPGSALPGSAPLGSAPAPTLGALPSDFVPPPAAPFAQPLGYAAPAPPPFLQPSPNPFTQTLPGALPVSLVRPPRGSFTPSLGHAYSSSFITPTAGFYTPQRPQSHMATLSMPNLFSQAPAVPAAGSLLLQTHSPSPTSSLQPVCLGGPSKPRTLQVGQPSTKVDPKQALALLASEPPLVPARPAKGLESLLLSSKSEETKDPFEDLLKKSKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1295061..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1432436..1432495,1436740..1436828,1441058..1441186,1443430..1443685,1444531..1445832)
location: region:1295061-1445832:1
so has part: feature:1295061-1295239:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1432436-1432495:1:exon
so has part: feature:1436740-1436828:1:exon
so has part: feature:1441058-1441186:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1445832:1:exon

XP_033374307.1
type: Protein
SIO_000068: ncbiprotein

position:1295061:1
position: 1295061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295061-1295239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1432436-1432495:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1436740-1436828:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1441058-1441186:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1443430-1443685:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1444531-1445832:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X4
translation: MTHLHVPKPIGWIDENISFQACVLGKCKRIMSVCNDSTVAIGLFQKGINVPSLLPSLSILQNPETTFEVYAEVTHSGISCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDVAENGCSAVPEEPLPRTAPSPLVEKKDPKLREDRRPITVHFGQQHRLRPPRPPPPKIQRSSRPVRPPRPHVVKRPKSNIGVEGRRTSVPSPEQPQPYRALKESDSADGEDAGSPEKAREPLPPSPLLSSKASEVNLLEDIFPNLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERNRIVPSMKLSHAYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNVAPITRRPQSRDSGLAPAEKEESSPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAAAGSAEILTPHGRSHLVPDLIPEPFGAGNVSLDAEVQQCVNSSSRPSQLLCGAAGAAEMLQPVRVKTEGAGNESELLLSLLDPLRTTGWPGSALPGSAPLGSAPAPTLGALPSDFVPPPAAPFAQPLGYAAPAPPPFLQPSPNPFTQTLPGALPVSLVRPPRGSFTPSLGHAYSSSFITPTAGFYTPQRPQSHMATLSMPNLFSQAPAVPAAGSLLLQTHSPSPTSSLQPVCLGGPSKPRTLQVGQPSTKVDPKQALALLASEPPLVPARPAKGLESLLLSSKSEETKDPFEDLLKKSKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1295061..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1432436..1432495,1436740..1436828,1443430..1443685,1444531..1445832)
location: region:1295061-1445832:1
so has part: feature:1295061-1295239:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1432436-1432495:1:exon
so has part: feature:1436740-1436828:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1445832:1:exon

XP_033374310.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1295061-1295239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1432436-1432495:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1436740-1436828:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1443430-1443685:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1444531-1445832:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X2
translation: MTHLHVPKPIGWIDENISFQACVLGKCKRIMSVCNDSTVAIGLFQKGINVPSLLPSLSILQNPETTFEVYAEVTHSGISCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDVAENGCSAVPEEPLPRTAPSPLVEKKDPKLREDRRPITVHFGQHRLRPPRPPPPKIQRSSRPVRPPRPHVVKRPKSNIGVEGRRTSVPSPEHLVKPMRHYTVFLSEDSSDDEFQQEEDPVSGFSENFFFSAPFEWPQPYRALKESDSADGEDAGSPEKAREPLPPSPLLSSKASEVNLLEDIFPNLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERNRIVPSMKLSHAYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNVAPITRRPQSRDSGLAPAEKEESSPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAAAGSAEILTPHGRSHLVPDLIPEPFGAGNVSLDAEVQQCVNSSSRPSQLLCGAAGAAEMLQPVRVKTEGAGNESELLLSLLDPLRTTGWPGSALPGSAPLGSAPAPTLGALPSDFVPPPAAPFAQPLGYAAPAPPPFLQPSPNPFTQTLPGALPVSLVRPPRGSFTPSLGHAYSSSFITPTAGFYTPQRPQSHMATLSMPNLFSQAPAVPAAGSLLLQTHSPSPTSSLQPVCLGGPSKPRTLQVGQPSTKVDPKQALALLASEPPLVPARPAKGLESLLLSSKSEETKDPFEDLLKKSKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1295061..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1432439..1432495,1436740..1436828,1441058..1441186,1443430..1443685,1444531..1445832)
location: region:1295061-1445832:1
so has part: feature:1295061-1295239:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1432439-1432495:1:exon
so has part: feature:1436740-1436828:1:exon
so has part: feature:1441058-1441186:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1445832:1:exon

XP_033374308.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1295061-1295239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1432439-1432495:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1436740-1436828:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1441058-1441186:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1443430-1443685:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1444531-1445832:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X3
translation: MTHLHVPKPIGWIDENISFQACVLGKCKRIMSVCNDSTVAIGLFQKGINVPSLLPSLSILQNPETTFEVYAEVTHSGISCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDVAENGCSAVPEEPLPRTAPSPLVEKKDPKLREDRRPITVHFGQVRPPRPHVVKRPKSNIGVEGRRTSVPSPEHLVKPMRHYTVFLSEDSSDDEFQQEEDPVSGFSENFFFSAPFEWPQPYRALKESDSADGEDAGSPEKAREPLPPSPLLSSKASEVNLLEDIFPNLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERNRIVPSMKLSHAYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNVAPITRRPQSRDSGLAPAEKEESSPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAAAGSAEILTPHGRSHLVPDLIPEPFGAGNVSLDAEVQQCVNSSSRPSQLLCGAAGAAEMLQPVRVKTEGAGNESELLLSLLDPLRTTGWPGSALPGSAPLGSAPAPTLGALPSDFVPPPAAPFAQPLGYAAPAPPPFLQPSPNPFTQTLPGALPVSLVRPPRGSFTPSLGHAYSSSFITPTAGFYTPQRPQSHMATLSMPNLFSQAPAVPAAGSLLLQTHSPSPTSSLQPVCLGGPSKPRTLQVGQPSTKVDPKQALALLASEPPLVPARPAKGLESLLLSSKSEETKDPFEDLLKKSKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1295061..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1436740..1436828,1441058..1441186,1443430..1443685,1444531..1445832)
location: region:1295061-1445832:1
so has part: feature:1295061-1295239:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1436740-1436828:1:exon
so has part: feature:1441058-1441186:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1445832:1:exon

XP_033374309.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1295061-1295239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1436740-1436828:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1441058-1441186:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1443430-1443685:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1444531-1445832:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X6
translation: MTHLHVPKPIGWIDENISFQACVLGKCKRIMSVCNDSTVAIGLFQKGINVPSLLPSLSILQNPETTFEVYAEVTHSGISCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDVAENGCSAVPEEPLPRTAPSPLVEKKDPKLREDRRPITVHFGQVRPPRPHVVKRPKSNIGVEGRRTSVPSPEQPQPYRALKESDSADGEDAGSPEKAREPLPPSPLLSSKASEVNLLEDIFPNLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERNRIVPSMKLSHAYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNVAPITRRPQSRDSGLAPAEKEESSPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAAAGSAEILTPHGRSHLVPDLIPEPFGAGNVSLDAEVQQCVNSSSRPSQLLCGAAGAAEMLQPVRVKTEGAGNESELLLSLLDPLRTTGWPGSALPGSAPLGSAPAPTLGALPSDFVPPPAAPFAQPLGYAAPAPPPFLQPSPNPFTQTLPGALPVSLVRPPRGSFTPSLGHAYSSSFITPTAGFYTPQRPQSHMATLSMPNLFSQAPAVPAAGSLLLQTHSPSPTSSLQPVCLGGPSKPRTLQVGQPSTKVDPKQALALLASEPPLVPARPAKGLESLLLSSKSEETKDPFEDLLKKSKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1295061..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1436740..1436828,1443430..1443685,1444531..1445832)
location: region:1295061-1445832:1
so has part: feature:1295061-1295239:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1436740-1436828:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1445832:1:exon

XP_033374311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1295061-1295239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1436740-1436828:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1443430-1443685:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1444531-1445832:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X8
translation: MTHLHVPKPIGWIDENISFQACVLGKCKRIMSVCNDSTVAIGLFQKGINVPSLLPSLSILQNPETTFEVYAEVTHSGISCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDVAENGCSAVPEEPLPRTAPSPLVEKKDPKLREDRRPITVHFGQAAAVPGPEGVGQCRWRGRGQPGEGKRAAAPEPSALQQGLRSQPPGRYLPQLGSGSPAPAPQPGQEPGGPSDAQGGGGAALLL
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1295061..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1443430..1443678)
location: region:1295061-1443678:1
so has part: feature:1295061-1295239:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1443430-1443678:1:exon

XP_033374313.1
type: Protein
SIO_000068: ncbiprotein

position:1443678:1
position: 1443678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295061-1295239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1443430-1443678:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X9
translation: MTHLHVPKPIGWIDENISFQACVLGKCKRIMSVCNDSTVAIGLFQKGINVPSLLPSLSILQNPETTFEVYAEVTHSGISCIGKDPEVRRQFPEGYSDQEVLQTLTKFCFPFYVDSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDVAENGCSAVPEEPLPRTAPSPLVEKKDPKLREDRRPITVHFGQIFVNDG
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1295061..1295239,1299801..1299871,1324755..1324798,1339610..1339659,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1422552..1422572)
location: region:1295061-1422572:1
so has part: feature:1295061-1295239:1:exon
so has part: feature:1299801-1299871:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1339610-1339659:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1422552-1422572:1:exon

XP_033374314.1
type: Protein
SIO_000068: ncbiprotein

position:1422572:1
position: 1422572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295061-1295239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1299801-1299871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1339610-1339659:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1422552-1422572:1:exon

DENND1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DENND1A
product: DENN domain containing 1A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033518421.1
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1299819..1299871,1308886..1309072,1324755..1324798,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1432436..1432495,1436740..1436828,1441058..1441186,1443430..1443685,1444531..1447996)
location: region:1299819-1447996:1
so has part: feature:1299819-1299871:1:exon
so has part: feature:1308886-1309072:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1432436-1432495:1:exon
so has part: feature:1436740-1436828:1:exon
so has part: feature:1441058-1441186:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1447996:1:exon

position:1299819:1
position: 1299819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1299819-1299871:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1308886-1309072:1:exon

position:1308886:1
position: 1308886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1309072:1
position: 1309072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1432436-1432495:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1436740-1436828:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1441058-1441186:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1443430-1443685:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1444531-1447996:1:exon

DENND1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DENND1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DENN domain-containing protein 1A isoform X7
translation: MADRAPQDGHRQSGCWCFLLILRCGGNSQRATVTSHAINQVGQNFTFVLTDIDSKQRFGFCRLSSGAKSCFCILSYLPWFEVFYKLLNVLADYSAKGQDSQRSELLETFHKLTIPEPGTSVHLGVHSYFTVPDTRELPSIPENRNLTEYFVAVDVNNMLHLYASMLYERRILICCSKLSTLTACIHGSAAMLYPMFWQHVYIPVLPPHLLDYCCAPMPYLIGIHLSLMEKVRSMALEDVVILNVDTNTLETPFDDLQSLPNDVVSALKNRLKKVSTTTGDGVARAFLKAQAAFFGSYRNALKIEPGEPITFCEEAFVSHRSSVMRQFLQNAIQLQLFKQFIDGRLDLLNSGEGFSDVFEEEINMGEYAGSDKLYHQWLSTVRKGSGAILNTVKTKANPAMKTVYKFAKDHAKMGIKEVKNRLKQKDVAENGCSAVPEEPLPRTAPSPLVEKKDPKLREDRRPITVHFGQQHRLRPPRPPPPKIQRSSRPVRPPRPHVVKRPKSNIGVEGRRTSVPSPEHLVKPMRHYTVFLSEDSSDDEFQQEEDPVSGFSENFFFSAPFEWPQPYRALKESDSADGEDAGSPEKAREPLPPSPLLSSKASEVNLLEDIFPNLEVEAQPQPLSQAKSLEDLRTPKEEAEQRCSFEYQRMDLGVSERNRIVPSMKLSHAYNKLWSMGHDDMAIPTKYSQSSPERPLAALGNVAPITRRPQSRDSGLAPAEKEESSPAIQGNITIPRPQGRKTPELGIVPPPPAPRASKHQAAAGSAEILTPHGRSHLVPDLIPEPFGAGNVSLDAEVQQCVNSSSRPSQLLCGAAGAAEMLQPVRVKTEGAGNESELLLSLLDPLRTTGWPGSALPGSAPLGSAPAPTLGALPSDFVPPPAAPFAQPLGYAAPAPPPFLQPSPNPFTQTLPGALPVSLVRPPRGSFTPSLGHAYSSSFITPTAGFYTPQRPQSHMATLSMPNLFSQAPAVPAAGSLLLQTHSPSPTSSLQPVCLGGPSKPRTLQVGQPSTKVDPKQALALLASEPPLVPARPAKGLESLLLSSKSEETKDPFEDLLKKSKQDVSPTPGKVEQLRKRWETFE
SIO_010081: DENND1A
subclass of: SO_0000673
so part of: DENND1A
location: join(1309013..1309072,1324755..1324798,1342469..1342588,1359781..1359850,1360367..1360447,1362516..1362569,1366152..1366262,1370071..1370171,1375845..1375890,1384578..1384679,1390739..1390864,1412977..1413078,1413598..1413685,1414213..1414253,1415154..1415225,1416292..1416348,1421233..1421364,1432436..1432495,1436740..1436828,1441058..1441186,1443430..1443685,1444531..1445832)
location: region:1309013-1445832:1
so has part: feature:1309013-1309072:1:exon
so has part: feature:1324755-1324798:1:exon
so has part: feature:1342469-1342588:1:exon
so has part: feature:1359781-1359850:1:exon
so has part: feature:1360367-1360447:1:exon
so has part: feature:1362516-1362569:1:exon
so has part: feature:1366152-1366262:1:exon
so has part: feature:1370071-1370171:1:exon
so has part: feature:1375845-1375890:1:exon
so has part: feature:1384578-1384679:1:exon
so has part: feature:1390739-1390864:1:exon
so has part: feature:1412977-1413078:1:exon
so has part: feature:1413598-1413685:1:exon
so has part: feature:1414213-1414253:1:exon
so has part: feature:1415154-1415225:1:exon
so has part: feature:1416292-1416348:1:exon
so has part: feature:1421233-1421364:1:exon
so has part: feature:1432436-1432495:1:exon
so has part: feature:1436740-1436828:1:exon
so has part: feature:1441058-1441186:1:exon
so has part: feature:1443430-1443685:1:exon
so has part: feature:1444531-1445832:1:exon

XP_033374312.1
type: Protein
SIO_000068: ncbiprotein

position:1309013:1
position: 1309013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1309013-1309072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1324755-1324798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1342469-1342588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359781-1359850:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1360367-1360447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1362516-1362569:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1366152-1366262:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1370071-1370171:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1375845-1375890:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1384578-1384679:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1390739-1390864:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1412977-1413078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1413598-1413685:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1414213-1414253:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1415154-1415225:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1416292-1416348:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1421233-1421364:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1432436-1432495:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1436740-1436828:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1441058-1441186:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1443430-1443685:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1444531-1445832:1:exon

CRB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1450478..1505519)
location: region:1450478-1505519:-1
so has part: feature:1450478-1505519:-1:exon
subclass of: SO_0000010

107211939
type: Gene
SIO_000068: ncbigene

position:1450478:-1
position: 1450478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505519:-1
position: 1505519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1450478-1505519:-1:exon

CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015644537.3
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1450478..1451038,1453959..1454085,1454502..1454618,1455434..1456301,1456712..1456877,1457698..1458254,1459051..1459986,1468396..1468509,1469402..1469584,1470034..1470173,1470592..1470787,1472461..1473159,1482160..1482358))
location: region:1450478-1482358:-1
so has part: feature:1482160-1482358:-1:exon
so has part: feature:1472461-1473159:-1:exon
so has part: feature:1470592-1470787:-1:exon
so has part: feature:1470034-1470173:-1:exon
so has part: feature:1469402-1469584:-1:exon
so has part: feature:1468396-1468509:-1:exon
so has part: feature:1459051-1459986:-1:exon
so has part: feature:1457698-1458254:-1:exon
so has part: feature:1456712-1456877:-1:exon
so has part: feature:1455434-1456301:-1:exon
so has part: feature:1454502-1454618:-1:exon
so has part: feature:1453959-1454085:-1:exon
so has part: feature:1450478-1451038:-1:exon

position:1482358:-1
position: 1482358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482160-1482358:-1:exon

position:1482160:-1
position: 1482160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1472461-1473159:-1:exon

position:1472461:-1
position: 1472461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1473159:-1
position: 1473159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1470592-1470787:-1:exon

position:1470592:-1
position: 1470592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1470787:-1
position: 1470787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1470034-1470173:-1:exon

position:1470034:-1
position: 1470034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1470173:-1
position: 1470173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1469402-1469584:-1:exon

position:1469402:-1
position: 1469402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469584:-1
position: 1469584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1468396-1468509:-1:exon

position:1468396:-1
position: 1468396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1468509:-1
position: 1468509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1459051-1459986:-1:exon

position:1459051:-1
position: 1459051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1459986:-1
position: 1459986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1457698-1458254:-1:exon

position:1457698:-1
position: 1457698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458254:-1
position: 1458254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1456712-1456877:-1:exon

position:1456712:-1
position: 1456712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456877:-1
position: 1456877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1455434-1456301:-1:exon

position:1455434:-1
position: 1455434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1456301:-1
position: 1456301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1454502-1454618:-1:exon

position:1454502:-1
position: 1454502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454618:-1
position: 1454618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1453959-1454085:-1:exon

position:1453959:-1
position: 1453959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1454085:-1
position: 1454085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1450478-1451038:-1:exon

position:1451038:-1
position: 1451038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CRB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein crumbs homolog 2 isoform X2
translation: MELKKTTSKPYNAALLLPLFLLFWGTSYSENDSGCSSSPCENGGSCKDLEAGYQCSCPVEPVAYMGINCELLYDACIEHSCPAHMTCTRTPGLLEYECMCPAGSAGAGCASVDECESSPCTDPRFECVDSPAGFTCRCQLGPGGEGCQAESSVCSGQPCLNNGTCVEAPGGFRCLCRPGFSGATCGDDIDECASGPCRNGAICRDRAGEYSCFCVPGFQGSNCEIDIDECASRPCRNHGTCLNHMDRYECRCAPGYTGVNCDTEIDECASDPCQNGALCNDHVGFYTCTCAPGYQGAQCEVDINECESQPCQSNGTCHDLINSYRCDCSDTGFEGAHCELDILECASDPCHNNATCLEGIKGYSCACWPGYTGQDCEEDEDECVTEPCHNGGLCLERSNPAHYGTQPHFPSNFSYSQAAGFLCQCQPGFTGETCFTNIDECESQPCQNGGLCQDLVNGFLCQCLPGYSGVECAVNINECEEGPCKNGAVCEDGIADYSCHCAPGQDGITWGGKNCSVQLTGCQTHDCQNEALCIPTYQAESHGHLCQCQPGFYDATCSTPTTFSFASRGYLLIELENSESRRGAGAASVSLRFRTTLPSAVLFYRGREAEYLFLELLDGLLHAELRREDVGYPLLLKGLRVDDGQWHKVEVVVHSTVQLKLWHGSCEAGLCLQSSPVPPGAALIPPAFLNLYIGGAEDPMANNTRSQQGFVGCLEDLQVDAEAVLPADLPLGESSLVKLGCDRTEWCLSQPCFHGGLCVDLWATFRCDCARPYGGPACSYEHPAATFGLENSTSFASFSLSDSLGADFNLSFFLRSRKPDGLLLQVCNGTGPCLTLYLRDGQLSIETSPTDTVTFPGNLVDGRRHLVALSFQEGSVGALQSDTFVELGQLPAQALGAGSEVFIGGHPNPDSAELWGGYFKGCLQDMQLNSHQVQFFQVENDSLPEELNRTQTGNLVNGCISDDTCKSEPCQNGGRCIVTWNDFHCSCPANFTGKFCEEKVWCESDPCPEATTCIDVVAGYVCLANATFNGHAAIEFTANTSVTRTLSSLHVDFRTRDEDAVLLQAVEEVDSLQVAIKNSSLLVDIRSGNSIEGVSFLSPQPVADGAWHSVSVSMEEPAALSSRWLLRLDGSANATLQGSAGNLDFLKKDALVVLAENFTGCLGRVQIGGIFLPFPAHRPYPQPEQFQRAGPGSVRLGCSGADVCASGPCLNAGTCEDLFNSFRCGCSAGWAGQRCEANIDDCQPSPCVHGDCVDAVADFQCECFRGFIGKRCDINVDDCVRHQCLNGATCVDGVYGYSCKCPPQYSGPRCEWPFPPQQCGKNFTCLNGGRCITESWGANCSCRPGFTGRNCQININECEPNPCQNGGTCQDSENRYECVCSASYTGERCDINRVWAHLSHSSVVGAVGAAGAALLLAVLVATAIAMKRRRATQGTYSPSRQEKDGARVEMWNVIKMPPTERLI
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1450823..1451038,1453959..1454085,1454502..1454618,1455434..1456301,1456712..1456877,1457698..1458254,1459051..1459986,1468396..1468509,1469402..1469584,1470034..1470173,1470592..1470787,1472461..1473159,1482160..1482232))
location: region:1450823-1482232:-1
so has part: feature:1482160-1482232:-1:exon
so has part: feature:1472461-1473159:-1:exon
so has part: feature:1470592-1470787:-1:exon
so has part: feature:1470034-1470173:-1:exon
so has part: feature:1469402-1469584:-1:exon
so has part: feature:1468396-1468509:-1:exon
so has part: feature:1459051-1459986:-1:exon
so has part: feature:1457698-1458254:-1:exon
so has part: feature:1456712-1456877:-1:exon
so has part: feature:1455434-1456301:-1:exon
so has part: feature:1454502-1454618:-1:exon
so has part: feature:1453959-1454085:-1:exon
so has part: feature:1450823-1451038:-1:exon

XP_015500023.1
type: Protein
SIO_000068: ncbiprotein

position:1450823:-1
position: 1450823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482232:-1
position: 1482232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1482160-1482232:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1472461-1473159:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1470592-1470787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1470034-1470173:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1469402-1469584:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1468396-1468509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1459051-1459986:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1457698-1458254:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1456712-1456877:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1455434-1456301:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1454502-1454618:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1453959-1454085:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1450823-1451038:-1:exon

CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_015644541.3
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
location: complement(join(1451281..1452071,1453959..1454085,1454502..1454618,1455434..1456301,1456712..1456877,1457698..1458254,1459051..1459986,1468396..1468509,1469402..1469584,1470034..1470173,1470592..1470787,1472461..1473159,1497660..1497709,1505404..1505519))
location: region:1451281-1505519:-1
so has part: feature:1505404-1505519:-1:exon
so has part: feature:1497660-1497709:-1:exon
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CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015644540.2
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
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location: region:1451281-1505335:-1
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position:1505335:-1
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urn:…
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SIO_000300: 14
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CRB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CRB2
product: crumbs cell polarity complex component 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033518415.1
SIO_010081: CRB2
subclass of: SO_0000673
so part of: CRB2
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location: region:1451281-1505335:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:1497844-1505335:-1:exon