Parus major isolate Abel chromosome 4A, Parus_major1.1, whole genome shotgun sequence.
type: Entry
definition: Parus major isolate Abel chromosome 4A, Parus_major1.1, whole genome shotgun sequence.
sequence version: NC_031772.1
sequence date: 2020-04-17
sequence: sequence
division: CON
label: NC_031772.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA312399
dblink: SAMN03083587
keyword: WGS
keyword: RefSeq
source: Parus major (Great Tit)
organism: Parus major
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Paridae; Parus.
reference: 1
references: 26805030
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003713.1.\nOn Nov 14, 2016 this sequence version replaced NC_029272.1.\nAssembly name: Parus_major1.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Animal Breeding and Genomics\nCentre, Wageningen University on 2016/06/30. The original\nwhole-genome shotgun project has the accession JRXK00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Animal Breeding and Genomics Centre,\n Wageningen University\nAssembly Date :: MAY-2013\nAssembly Method :: AllPaths v. April-2013\nAssembly Name :: Parus_major1.0.3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 95.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Parus major Annotation Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19934923
topology: linear
so has quality: SO_0000987
location: 1..19934923
location: region:1-19934923:1
RO_0002162: 9157

NC_031772
type: RefSeq
SIO_000068: refseq

PRJNA312399
type: BioProject
SIO_000068: bioproject

SAMN03083587
type: BioSample
SIO_000068: biosample

1
title: Evolutionary signals of selection on cognition from the great tit genome and methylome
author: Laine, V.N.
author: Gossmann, T.I.
author: Schachtschneider, K.M.
author: Garroway, C.J.
author: Madsen, O.
author: Verhoeven, K.J.
author: de Jager, V.
author: Megens, H.J.
author: Warren, W.C.
author: Minx, P.
author: Crooijmans, R.P.
author: Corcoran, P.
author: Sheldon, B.C.
author: Slate, J.
author: Zeng, K.
author: van Oers, K.
author: Visser, M.E.
author: Groenen, M.A.
journal: Nat Commun 7, 10474 (2016)
pubmed: 26805030

26805030
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19934923:1
position: 19934923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19934923:1:source
so part of: sequence
organism: Parus major
mol type: genomic DNA
isolate: Abel
chromosome: 4A
sex: male
tissue type: blood
dev stage: 4 year old

9157
type: Taxonomy
SIO_000068: taxonomy

LOC107204022
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107204022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7617..25014
location: region:7617-25014:1
so has part: feature:7617-25014:1:exon
subclass of: SO_0000010

107204022
type: Gene
SIO_000068: ncbigene

position:7617:1
position: 7617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25014:1
position: 25014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7617-25014:1:exon

LOC107204022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107204022
product: cytochrome P450 2G1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 77 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015626781.3
SIO_010081: LOC107204022
subclass of: SO_0000673
so part of: LOC107204022
location: join(7617..8071,9027..9189,10190..10339,12026..12186,15193..15369,15880..16021,16264..16451,17428..17569,18118..18242,22223..22296,24615..25014)
location: region:7617-25014:1
so has part: feature:7617-8071:1:exon
so has part: feature:9027-9189:1:exon
so has part: feature:10190-10339:1:exon
so has part: feature:12026-12186:1:exon
so has part: feature:15193-15369:1:exon
so has part: feature:15880-16021:1:exon
so has part: feature:16264-16451:1:exon
so has part: feature:17428-17569:1:exon
so has part: feature:18118-18242:1:exon
so has part: feature:22223-22296:1:exon
so has part: feature:24615-25014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7617-8071:1:exon

position:8071:1
position: 8071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9027-9189:1:exon

position:9027:1
position: 9027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9189:1
position: 9189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10190-10339:1:exon

position:10190:1
position: 10190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10339:1
position: 10339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12026-12186:1:exon

position:12026:1
position: 12026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12186:1
position: 12186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15193-15369:1:exon

position:15193:1
position: 15193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15369:1
position: 15369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15880-16021:1:exon

position:15880:1
position: 15880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16021:1
position: 16021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:16264-16451:1:exon

position:16264:1
position: 16264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16451:1
position: 16451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:17428-17569:1:exon

position:17428:1
position: 17428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17569:1
position: 17569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:18118-18242:1:exon

position:18118:1
position: 18118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18242:1
position: 18242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:22223-22296:1:exon

position:22223:1
position: 22223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22296:1
position: 22296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:24615-25014:1:exon

position:24615:1
position: 24615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107204022
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107204022
product: cytochrome P450 2G1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 77 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_015626782.3
SIO_010081: LOC107204022
subclass of: SO_0000673
so part of: LOC107204022
location: join(7619..8071,9027..9189,10190..10339,12026..12186,15193..15369,15880..16021,16264..16451,17428..17569,18118..18242,21429..21954)
location: region:7619-21954:1
so has part: feature:7619-8071:1:exon
so has part: feature:9027-9189:1:exon
so has part: feature:10190-10339:1:exon
so has part: feature:12026-12186:1:exon
so has part: feature:15193-15369:1:exon
so has part: feature:15880-16021:1:exon
so has part: feature:16264-16451:1:exon
so has part: feature:17428-17569:1:exon
so has part: feature:18118-18242:1:exon
so has part: feature:21429-21954:1:exon

position:7619:1
position: 7619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21954:1
position: 21954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7619-8071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9027-9189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10190-10339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12026-12186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15193-15369:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15880-16021:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16264-16451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17428-17569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18118-18242:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21429-21954:1:exon

position:21429:1
position: 21429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107204022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107204022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 2G1-like isoform X1
translation: MFPDCPQVSPSATMAPVLAALLALLALALLAQLSRHRAIAARLPPGPPALPLLGNLLQVSPFRTLQSLLKLSDRYGPVFTVWLGPRPVLVLCGTRAVREALVENPEVFAGRGQMPTLESTFRGYGVVFADGERWRQLRRFSLMVLRDFGMGRRSIESRIQEEAQELLHEFQKTQGKPFDPMFLLSCAVSNIICSIVFGNRFQYQDPEFLELLRVMNESFREMSTAWAQLYNMAEPLLKFVPGPHRRIPQLLGTMRSFIAKRVQDNARTLDPHSPRDFIDAFLIQMDKEKDNPKSEFTMENLELTTLNLFFAGTETVSSTLRFGFLFLMRHPQVEEKIFEEISQVVGFGRAPALADRSLMPFTDATIHEIQRCSDLIPMNVPHRVTQDTEFRGFCIPKGTDVYPLLSSVLNDPESFKNPQNFDPGNFLDEQGRFQRNEAFVPFSAGKRLCLGEALARAELFLFLTSLLQRLRLRPPASPEELPTAPLCDIWWTLTCIAAVTEDVPPASSRES
SIO_010081: LOC107204022
subclass of: SO_0000673
so part of: LOC107204022
location: join(7862..8071,9027..9189,10190..10339,12026..12186,15193..15369,15880..16021,16264..16451,17428..17569,18118..18242,22223..22296,24615..24618)
location: region:7862-24618:1
so has part: feature:7862-8071:1:exon
so has part: feature:9027-9189:1:exon
so has part: feature:10190-10339:1:exon
so has part: feature:12026-12186:1:exon
so has part: feature:15193-15369:1:exon
so has part: feature:15880-16021:1:exon
so has part: feature:16264-16451:1:exon
so has part: feature:17428-17569:1:exon
so has part: feature:18118-18242:1:exon
so has part: feature:22223-22296:1:exon
so has part: feature:24615-24618:1:exon

XP_015482267.1
type: Protein
SIO_000068: ncbiprotein

position:7862:1
position: 7862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24618:1
position: 24618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7862-8071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9027-9189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10190-10339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12026-12186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15193-15369:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15880-16021:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16264-16451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17428-17569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18118-18242:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:22223-22296:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:24615-24618:1:exon

LOC107204022
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107204022
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome P450 2G1-like isoform X2
translation: MFPDCPQVSPSATMAPVLAALLALLALALLAQLSRHRAIAARLPPGPPALPLLGNLLQVSPFRTLQSLLKLSDRYGPVFTVWLGPRPVLVLCGTRAVREALVENPEVFAGRGQMPTLESTFRGYGVVFADGERWRQLRRFSLMVLRDFGMGRRSIESRIQEEAQELLHEFQKTQGKPFDPMFLLSCAVSNIICSIVFGNRFQYQDPEFLELLRVMNESFREMSTAWAQLYNMAEPLLKFVPGPHRRIPQLLGTMRSFIAKRVQDNARTLDPHSPRDFIDAFLIQMDKEKDNPKSEFTMENLELTTLNLFFAGTETVSSTLRFGFLFLMRHPQVEEKIFEEISQVVGFGRAPALADRSLMPFTDATIHEIQRCSDLIPMNVPHRVTQDTEFRGFCIPKGTDVYPLLSSVLNDPESFKNPQNFDPGNFLDEQGRFQRNEAFVPFSAGKRLCLGEALARAELFLFLTSLLQRLRLRPPASPEELPTAPLG
SIO_010081: LOC107204022
subclass of: SO_0000673
so part of: LOC107204022
location: join(7862..8071,9027..9189,10190..10339,12026..12186,15193..15369,15880..16021,16264..16451,17428..17569,18118..18242,21429..21434)
location: region:7862-21434:1
so has part: feature:7862-8071:1:exon
so has part: feature:9027-9189:1:exon
so has part: feature:10190-10339:1:exon
so has part: feature:12026-12186:1:exon
so has part: feature:15193-15369:1:exon
so has part: feature:15880-16021:1:exon
so has part: feature:16264-16451:1:exon
so has part: feature:17428-17569:1:exon
so has part: feature:18118-18242:1:exon
so has part: feature:21429-21434:1:exon

XP_015482268.1
type: Protein
SIO_000068: ncbiprotein

position:21434:1
position: 21434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7862-8071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9027-9189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10190-10339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12026-12186:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15193-15369:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15880-16021:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16264-16451:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:17428-17569:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:18118-18242:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:21429-21434:1:exon

LOC107203679
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107203679
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 49267..51067
location: region:49267-51067:1
so has part: feature:49267-51067:1:exon
subclass of: SO_0000010

107203679
type: Gene
SIO_000068: ncbigene

position:49267:1
position: 49267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51067:1
position: 51067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49267-51067:1:exon

LOC107203679
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107203679
product: serine/threonine-protein kinase pim-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_015625991.1
SIO_010081: LOC107203679
subclass of: SO_0000673
so part of: LOC107203679
location: join(49267..49690,50162..50265,50348..50398,50708..51067)
location: region:49267-51067:1
so has part: feature:49267-49690:1:exon
so has part: feature:50162-50265:1:exon
so has part: feature:50348-50398:1:exon
so has part: feature:50708-51067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49267-49690:1:exon

position:49690:1
position: 49690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50162-50265:1:exon

position:50162:1
position: 50162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50265:1
position: 50265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50348-50398:1:exon

position:50348:1
position: 50348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50398:1
position: 50398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:50708-51067:1:exon

position:50708:1
position: 50708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107203679
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107203679
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:50954..50956,aa:OTHER)
product: LOW QUALITY PROTEIN: serine/threonine-protein kinase pim-1-like
translation: MVPGASAISDSLHPSERLSQTCQPAEGAERRDRSPSSLGPLDLNNTGATLTTGMAWENPQVQVGAQPNPGEASQEQVEEHLVSWSQELPDHSSQVTVLDMPAGTRPCLVEETIPVGPGSFLHLQEAAPRRPLTTAKAFLRAGHKKELWVLYQLGPQLGSSGFSTVFLGTRLSDGSLVAIKHVAWDMVLQWDELPDGTRVPVEIVLMEKVGFGCHRIIQLFDWFELPDSFVLVMEQSWDLLHVLLEQEFLSEEAVCWLFWQVLEAVWHCTACSILHXDIKLENLLVNLETGNLKLINFSRGTFLQEQACTVCR
SIO_010081: LOC107203679
subclass of: SO_0000673
so part of: LOC107203679
location: join(49267..49690,50162..50265,50348..50398,50708..51067)
location: region:49267-51067:1
so has part: feature:49267-49690:1:exon
so has part: feature:50162-50265:1:exon
so has part: feature:50348-50398:1:exon
so has part: feature:50708-51067:1:exon

XP_015481477.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:49267-49690:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:50162-50265:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50348-50398:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50708-51067:1:exon

ADGRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 87231..99474
location: region:87231-99474:1
so has part: feature:87231-99474:1:exon
subclass of: SO_0000010

107203670
type: Gene
SIO_000068: ncbigene

position:87231:1
position: 87231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99474:1
position: 99474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87231-99474:1:exon

ADGRG4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9157
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004497337.1
SIO_010081: ADGRG4
so part of: ADGRG4
location: join(87231..87319,87712..87764,88460..88499,88814..88839,89878..90020,90934..91066,91568..91686,92664..92874,93986..94151,94273..94422,95240..95362,97027..97072,97896..97999,98785..99100,99381..99474)
location: region:87231-99474:1
so has part: feature:87231-87319:1:exon
so has part: feature:87712-87764:1:exon
so has part: feature:88460-88499:1:exon
so has part: feature:88814-88839:1:exon
so has part: feature:89878-90020:1:exon
so has part: feature:90934-91066:1:exon
so has part: feature:91568-91686:1:exon
so has part: feature:92664-92874:1:exon
so has part: feature:93986-94151:1:exon
so has part: feature:94273-94422:1:exon
so has part: feature:95240-95362:1:exon
so has part: feature:97027-97072:1:exon
so has part: feature:97896-97999:1:exon
so has part: feature:98785-99100:1:exon
so has part: feature:99381-99474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87231-87319:1:exon

position:87319:1
position: 87319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:87712-87764:1:exon

position:87712:1
position: 87712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:87764:1
position: 87764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88460-88499:1:exon

position:88460:1
position: 88460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88499:1
position: 88499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88814-88839:1:exon

position:88814:1
position: 88814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88839:1
position: 88839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89878-90020:1:exon

position:89878:1
position: 89878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90020:1
position: 90020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:90934-91066:1:exon

position:90934:1
position: 90934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91066:1
position: 91066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:91568-91686:1:exon

position:91568:1
position: 91568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91686:1
position: 91686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:92664-92874:1:exon

position:92664:1
position: 92664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92874:1
position: 92874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:93986-94151:1:exon

position:93986:1
position: 93986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94151:1
position: 94151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:94273-94422:1:exon

position:94273:1
position: 94273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94422:1
position: 94422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:95240-95362:1:exon

position:95240:1
position: 95240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95362:1
position: 95362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:97027-97072:1:exon

position:97027:1
position: 97027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97072:1
position: 97072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:97896-97999:1:exon

position:97896:1
position: 97896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97999:1
position: 97999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:98785-99100:1:exon

position:98785:1
position: 98785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99100:1
position: 99100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:99381-99474:1:exon

position:99381:1
position: 99381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADGRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ADGRG4
product: adhesion G protein-coupled receptor G4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033514172.1
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(87231..87319,87712..87764,88460..88499,88814..88839,89878..90020,90934..91066,91568..91686,92664..92874,93986..94151,94273..94422,95240..95362,97027..97072,97896..97999,98785..99374)
location: region:87231-99374:1
so has part: feature:87231-87319:1:exon
so has part: feature:87712-87764:1:exon
so has part: feature:88460-88499:1:exon
so has part: feature:88814-88839:1:exon
so has part: feature:89878-90020:1:exon
so has part: feature:90934-91066:1:exon
so has part: feature:91568-91686:1:exon
so has part: feature:92664-92874:1:exon
so has part: feature:93986-94151:1:exon
so has part: feature:94273-94422:1:exon
so has part: feature:95240-95362:1:exon
so has part: feature:97027-97072:1:exon
so has part: feature:97896-97999:1:exon
so has part: feature:98785-99374:1:exon

position:99374:1
position: 99374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87231-87319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87712-87764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88460-88499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88814-88839:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89878-90020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90934-91066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91568-91686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92664-92874:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93986-94151:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94273-94422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95240-95362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97027-97072:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:97896-97999:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:98785-99374:1:exon

ADGRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ADGRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G4
translation: MNFSLLYKMERAPDCYDARRLLEHWFNIIFNGEGLLVTNFKVRDNYPHHGAHKRTHGKVKQMSQSYACKATVKALKIQEVLSLKIKDLLNDTYKEGTFSLYVKPEDVAVKSIALVGCSERSSLTRYKGNYSWPVTSPASKTEVSCRKNPLQSAQRSCEISIELEQAFWKKPNMTECKLLEKLPNSILDLQDIKLTEENAQDVVQHILYLLPDATLHAEELEIIARKISDIVELADMSVTLAETVLSILDYILLQEIEDENFRKITDCILKMTEEMGYKVLYTERNISVLTTSLALLVLRPDPRLFGGLAFGITSYNRGVDLKISVQENPFRKALASVFLPKSLKNFLGIKYSDPDRRSKIQFKFFGTTSLFLDDSLTMERLNTYVVSASIENASVQNLNEPVTVTLHHIDQNRGNAAVHCVFWDFGKNNGLGGWNTSGCEMEYTDMNYTICFCNHLTHFGVLLYNYRSSTAPAMGHQRCRLPVCGSMFHEIEEKLFQGTTKSPQCSSW
SIO_010081: ADGRG4
subclass of: SO_0000673
so part of: ADGRG4
location: join(87245..87319,87712..87764,88460..88499,88814..88839,89878..90020,90934..91066,91568..91686,92664..92874,93986..94151,94273..94422,95240..95362,97027..97072,97896..97999,98785..98922)
location: region:87245-98922:1
so has part: feature:87245-87319:1:exon
so has part: feature:87712-87764:1:exon
so has part: feature:88460-88499:1:exon
so has part: feature:88814-88839:1:exon
so has part: feature:89878-90020:1:exon
so has part: feature:90934-91066:1:exon
so has part: feature:91568-91686:1:exon
so has part: feature:92664-92874:1:exon
so has part: feature:93986-94151:1:exon
so has part: feature:94273-94422:1:exon
so has part: feature:95240-95362:1:exon
so has part: feature:97027-97072:1:exon
so has part: feature:97896-97999:1:exon
so has part: feature:98785-98922:1:exon

XP_033370063.1
type: Protein
SIO_000068: ncbiprotein

position:87245:1
position: 87245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98922:1
position: 98922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87245-87319:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87712-87764:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88460-88499:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88814-88839:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89878-90020:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90934-91066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:91568-91686:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:92664-92874:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93986-94151:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:94273-94422:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95240-95362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:97027-97072:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:97896-97999:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:98785-98922:1:exon

LOC117243692
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117243692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 101570..107349
location: region:101570-107349:1
so has part: feature:101570-107349:1:exon
subclass of: SO_0000010

117243692
type: Gene
SIO_000068: ncbigene

position:101570:1
position: 101570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107349:1
position: 107349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101570-107349:1:exon

LOC117243692
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC117243692
product: adhesion G-protein coupled receptor G2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033514173.1
SIO_010081: LOC117243692
subclass of: SO_0000673
so part of: LOC117243692
location: join(101570..101658,103607..103708,105093..105251,105912..107349)
location: region:101570-107349:1
so has part: feature:101570-101658:1:exon
so has part: feature:103607-103708:1:exon
so has part: feature:105093-105251:1:exon
so has part: feature:105912-107349:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101570-101658:1:exon

position:101658:1
position: 101658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103607-103708:1:exon

position:103607:1
position: 103607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103708:1
position: 103708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:105093-105251:1:exon

position:105093:1
position: 105093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105251:1
position: 105251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105912-107349:1:exon

position:105912:1
position: 105912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117243692
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC117243692
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adhesion G-protein coupled receptor G2-like
translation: MAMGHSLRSILTAIWFFIFVFHCLMKDEVVKQCRVYFCWGRFCLSGYSGWSGSGATAGSTPKHLNHKSPSQALQSLHSNGTSSTFNADFLPRTSSDTNFKIAEVH
SIO_010081: LOC117243692
subclass of: SO_0000673
so part of: LOC117243692
location: join(101616..101658,103607..103708,105093..105251,105912..105925)
location: region:101616-105925:1
so has part: feature:101616-101658:1:exon
so has part: feature:103607-103708:1:exon
so has part: feature:105093-105251:1:exon
so has part: feature:105912-105925:1:exon

XP_033370064.1
type: Protein
SIO_000068: ncbiprotein

position:101616:1
position: 101616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105925:1
position: 105925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101616-101658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103607-103708:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:105093-105251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105912-105925:1:exon

BRS3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 114532..121861
location: region:114532-121861:1
so has part: feature:114532-121861:1:exon
subclass of: SO_0000010

107203872
type: Gene
SIO_000068: ncbigene

position:114532:1
position: 114532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121861:1
position: 121861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114532-121861:1:exon

BRS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: BRS3
product: bombesin receptor subtype 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015626411.1
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(114532..115205,117916..118267,118890..121861)
location: region:114532-121861:1
so has part: feature:114532-115205:1:exon
so has part: feature:117916-118267:1:exon
so has part: feature:118890-121861:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:114532-115205:1:exon

position:115205:1
position: 115205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:117916-118267:1:exon

position:117916:1
position: 117916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118267:1
position: 118267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:118890-121861:1:exon

position:118890:1
position: 118890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: BRS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bombesin receptor subtype-3
translation: MSQFYLQSANQTLCASVDGTELKSSSDNETTNEKWTEDAFPGLEILCTIYVTYAVIISVGLLGNATLIKVFFRIKSMQTVPNIFITSLAFGDLLLLLTCVPIDATRYIVDTWLFGRIGCKLLSFIQLTSVGVSVFTLTVLSADRYRAIVKPLELQTSDALLKTCCKAGCVWIVSMIFAIPEAVFSDLYSFSNPEKNVTFEACAPYPVSEKTLQEAHSLVCFLVFYIVPLAVISVYYFLIARTLYKSTSNMPAEEHGHARKQIESRKRVAKTVLVLVALFAFCWLPNHILYLYRSFTYHTSVDASTFHLIATIFSRALAFSNSCVNPFALYWLSKSFRQHFKKQVLCCKSAFCAKPPSAPQSSSFTRAPSITGSMHGSEISVTLLTDYSITKEEESV
SIO_010081: BRS3
subclass of: SO_0000673
so part of: BRS3
location: join(114775..115205,117916..118267,118890..119297)
location: region:114775-119297:1
so has part: feature:114775-115205:1:exon
so has part: feature:117916-118267:1:exon
so has part: feature:118890-119297:1:exon

XP_015481897.1
type: Protein
SIO_000068: ncbiprotein

position:114775:1
position: 114775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119297:1
position: 119297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114775-115205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:117916-118267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:118890-119297:1:exon

HTATSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: HTATSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 125375..138244
location: region:125375-138244:1
so has part: feature:125375-138244:1:exon
subclass of: SO_0000010

107203871
type: Gene
SIO_000068: ncbigene

position:125375:1
position: 125375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138244:1
position: 138244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125375-138244:1:exon

HTATSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: HTATSF1
product: HIV-1 Tat specific factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_015626410.3
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(125375..125651,129213..129420,129731..129778,130942..131096,132128..132291,133866..133965,134500..134589,135071..135208,135579..138244)
location: region:125375-138244:1
so has part: feature:125375-125651:1:exon
so has part: feature:129213-129420:1:exon
so has part: feature:129731-129778:1:exon
so has part: feature:130942-131096:1:exon
so has part: feature:132128-132291:1:exon
so has part: feature:133866-133965:1:exon
so has part: feature:134500-134589:1:exon
so has part: feature:135071-135208:1:exon
so has part: feature:135579-138244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:125375-125651:1:exon

position:125651:1
position: 125651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:129213-129420:1:exon

position:129213:1
position: 129213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129420:1
position: 129420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:129731-129778:1:exon

position:129731:1
position: 129731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129778:1
position: 129778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:130942-131096:1:exon

position:130942:1
position: 130942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131096:1
position: 131096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132128-132291:1:exon

position:132128:1
position: 132128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132291:1
position: 132291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:133866-133965:1:exon

position:133866:1
position: 133866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133965:1
position: 133965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:134500-134589:1:exon

position:134500:1
position: 134500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134589:1
position: 134589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:135071-135208:1:exon

position:135071:1
position: 135071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135208:1
position: 135208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:135579-138244:1:exon

position:135579:1
position: 135579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTATSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: HTATSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: HIV Tat-specific factor 1
translation: MSGEDRNEEFYRQLQLQQQYEAKPAEGEDEGESDPFTYVDPADGAAYEWDLEKKAWFPKITEDFLATYHANYGFPANETDDTSSASGTAAESNQPVSSKSSGTQPSANKTGQNQTDPKQKSEKRKLEPGWFHVEEDRNTNVYVTGLPPDITKDEFVQVMSKCGIIMRDPQTEEHKIKLYKDKEGNLKGDGLCCYLKRESVQLALRLLDEAEIRGYKLHVEVAKFQLKGEYDASKKKKKCKDYKKKLSQQQKQLDWRPEKKDGATRMRHERIVIIRNMFHPKDFEEDPLVLNEIREDLRTECEKFGQVKKVLIFDRHPDGVASVSFKEATEADLCKLTLNGRWFGGRQLSAETWDGVTDYQVEETAREREERLKVWESFLGDSDTKEQQTTSDSDSASSSVKLPKGKQPPEVNDTLREVANDEAHKRENNGEGVNEDGAPSTDSSLAGSDGEADT
SIO_010081: HTATSF1
subclass of: SO_0000673
so part of: HTATSF1
location: join(125475..125651,129213..129420,129731..129778,130942..131096,132128..132291,133866..133965,134500..134589,135071..135208,135579..135863)
location: region:125475-135863:1
so has part: feature:125475-125651:1:exon
so has part: feature:129213-129420:1:exon
so has part: feature:129731-129778:1:exon
so has part: feature:130942-131096:1:exon
so has part: feature:132128-132291:1:exon
so has part: feature:133866-133965:1:exon
so has part: feature:134500-134589:1:exon
so has part: feature:135071-135208:1:exon
so has part: feature:135579-135863:1:exon

XP_015481896.1
type: Protein
SIO_000068: ncbiprotein

position:125475:1
position: 125475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135863:1
position: 135863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125475-125651:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:129213-129420:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:129731-129778:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130942-131096:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132128-132291:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:133866-133965:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:134500-134589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:135071-135208:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:135579-135863:1:exon

VGLL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 140472..155149
location: region:140472-155149:1
so has part: feature:140472-155149:1:exon
subclass of: SO_0000010

107203873
type: Gene
SIO_000068: ncbigene

position:140472:1
position: 140472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155149:1
position: 155149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140472-155149:1:exon

VGLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: VGLL1
product: vestigial like family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015626412.2
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(140472..141768,144867..145075,145649..146068,148141..148200,148841..155149)
location: region:140472-155149:1
so has part: feature:140472-141768:1:exon
so has part: feature:144867-145075:1:exon
so has part: feature:145649-146068:1:exon
so has part: feature:148141-148200:1:exon
so has part: feature:148841-155149:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140472-141768:1:exon

position:141768:1
position: 141768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144867-145075:1:exon

position:144867:1
position: 144867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145075:1
position: 145075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145649-146068:1:exon

position:145649:1
position: 145649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146068:1
position: 146068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:148141-148200:1:exon

position:148141:1
position: 148141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148200:1
position: 148200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148841-155149:1:exon

position:148841:1
position: 148841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: VGLL1
product: vestigial like family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015626413.2
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(141775..144303,144867..145075,145649..146068,148141..148200,148841..149014)
location: region:141775-149014:1
so has part: feature:141775-144303:1:exon
so has part: feature:144867-145075:1:exon
so has part: feature:145649-146068:1:exon
so has part: feature:148141-148200:1:exon
so has part: feature:148841-149014:1:exon

position:141775:1
position: 141775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149014:1
position: 149014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141775-144303:1:exon

position:144303:1
position: 144303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144867-145075:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:145649-146068:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148141-148200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148841-149014:1:exon

VGLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 1
translation: MEEETRKLSPKLSKRKEPVKTEWGSQSVVFTYFQGDINSMVDEHFSRALSNARSPQDLSTKHKVDSMSPHQWNFSSHCCKSYPSSSSTSMANSALNCSAAGVVGQCQPSSLCSRPAQPADLWPFLPIGTPSVTSSVYPHTLPDLHAADELISDRKYSSLLGLLQQERCLTSMQECTMKQHSSSACMTGPATLQNMSQSSAPEGERKANSYQGSENPSVSHATPGIQLHDRRQNLYF
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(144886..145075,145649..146068,148141..148200,148841..148881)
location: region:144886-148881:1
so has part: feature:144886-145075:1:exon
so has part: feature:145649-146068:1:exon
so has part: feature:148141-148200:1:exon
so has part: feature:148841-148881:1:exon

XP_015481898.1
type: Protein
SIO_000068: ncbiprotein

position:144886:1
position: 144886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148881:1
position: 148881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144886-145075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145649-146068:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148141-148200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148841-148881:1:exon

VGLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: VGLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 1
translation: MEEETRKLSPKLSKRKEPVKTEWGSQSVVFTYFQGDINSMVDEHFSRALSNARSPQDLSTKHKVDSMSPHQWNFSSHCCKSYPSSSSTSMANSALNCSAAGVVGQCQPSSLCSRPAQPADLWPFLPIGTPSVTSSVYPHTLPDLHAADELISDRKYSSLLGLLQQERCLTSMQECTMKQHSSSACMTGPATLQNMSQSSAPEGERKANSYQGSENPSVSHATPGIQLHDRRQNLYF
SIO_010081: VGLL1
subclass of: SO_0000673
so part of: VGLL1
location: join(144886..145075,145649..146068,148141..148200,148841..148881)
location: region:144886-148881:1
so has part: feature:144886-145075:1:exon
so has part: feature:145649-146068:1:exon
so has part: feature:148141-148200:1:exon
so has part: feature:148841-148881:1:exon

XP_015481899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:144886-145075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145649-146068:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148141-148200:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:148841-148881:1:exon

CD40LG
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 161347..174707
location: region:161347-174707:1
so has part: feature:161347-174707:1:exon
subclass of: SO_0000010

107203830
type: Gene
SIO_000068: ncbigene

position:161347:1
position: 161347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174707:1
position: 174707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161347-174707:1:exon

CD40LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CD40LG
product: CD40 ligand, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015626285.2
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(161347..161434,168641..168778,169996..170038,170336..170392,170676..170738,172618..174707)
location: region:161347-174707:1
so has part: feature:161347-161434:1:exon
so has part: feature:168641-168778:1:exon
so has part: feature:169996-170038:1:exon
so has part: feature:170336-170392:1:exon
so has part: feature:170676-170738:1:exon
so has part: feature:172618-174707:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161347-161434:1:exon

position:161434:1
position: 161434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168641-168778:1:exon

position:168641:1
position: 168641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168778:1
position: 168778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:169996-170038:1:exon

position:169996:1
position: 169996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170038:1
position: 170038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:170336-170392:1:exon

position:170336:1
position: 170336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170392:1
position: 170392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:170676-170738:1:exon

position:170676:1
position: 170676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170738:1
position: 170738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:172618-174707:1:exon

position:172618:1
position: 172618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD40LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD40 ligand isoform X3
translation: MGAVPRAPCRMEEVLSLSEDYIFLKKVQKCQTTEGQKSTLLDCEKIMKGFQSIQCKDEPLKEQPKFEMQRGPEHREHAHLMHKNETSMAAEKRKPVAVHLAGQQSNKAGSVLEWKETMYGPTNSLISNKEGKLKVEEAGLYYIYSQVSFCTREASLAPFTLYIYLHIPKEEDRLLVKGQKTQSTLKSHCELQSIRVGGVFNLREGDMVFVNVTDSTKVKYSHGNTYLGIFKV
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(161405..161434,168641..168778,169996..170038,170336..170392,170676..170738,172618..172985)
location: region:161405-172985:1
so has part: feature:161405-161434:1:exon
so has part: feature:168641-168778:1:exon
so has part: feature:169996-170038:1:exon
so has part: feature:170336-170392:1:exon
so has part: feature:170676-170738:1:exon
so has part: feature:172618-172985:1:exon

XP_015481771.1
type: Protein
SIO_000068: ncbiprotein

position:161405:1
position: 161405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172985:1
position: 172985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161405-161434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168641-168778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169996-170038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170336-170392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170676-170738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:172618-172985:1:exon

CD40LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CD40LG
product: CD40 ligand, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015626284.3
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(165317..166872,168641..168778,169996..170038,170336..170392,170676..170738,172618..172688,172794..174707)
location: region:165317-174707:1
so has part: feature:165317-166872:1:exon
so has part: feature:168641-168778:1:exon
so has part: feature:169996-170038:1:exon
so has part: feature:170336-170392:1:exon
so has part: feature:170676-170738:1:exon
so has part: feature:172618-172688:1:exon
so has part: feature:172794-174707:1:exon

position:165317:1
position: 165317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:165317-166872:1:exon

position:166872:1
position: 166872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168641-168778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169996-170038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170336-170392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170676-170738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:172618-172688:1:exon

position:172688:1
position: 172688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:172794-174707:1:exon

position:172794:1
position: 172794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD40LG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CD40LG
product: CD40 ligand, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_015626283.3
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(166152..166872,168641..168778,169996..170038,170336..170392,170676..170738,172618..174707)
location: region:166152-174707:1
so has part: feature:166152-166872:1:exon
so has part: feature:168641-168778:1:exon
so has part: feature:169996-170038:1:exon
so has part: feature:170336-170392:1:exon
so has part: feature:170676-170738:1:exon
so has part: feature:172618-174707:1:exon

position:166152:1
position: 166152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166152-166872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168641-168778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169996-170038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170336-170392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170676-170738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:172618-174707:1:exon

CD40LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD40 ligand isoform X1
translation: MNEPYGPEAPRPISSTSPGIMKMFMGFLTLFIVAQTIGTVLFCLYLHMKMDKMEEVLSLSEDYIFLKKVQKCQTTEGQKSTLLDCEKIMKGFQSIQCKDEPLKEQPKFEMQRGPEHREHAHLMHKNETSMAAEKRKPVAVHLAGQQSNKAGSVLEWKETMYGPTNSLISNKEGKLKVEEAGLYYIYSQVSFCTREASLAPFTLYIYLHIPKEEDRLLVKGQKTQSTLKSHCELQSIRVGGVFNLREGDMVFVNVTDSTKVKYSHGNTYLGIFKV
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(166717..166872,168641..168778,169996..170038,170336..170392,170676..170738,172618..172985)
location: region:166717-172985:1
so has part: feature:166717-166872:1:exon
so has part: feature:168641-168778:1:exon
so has part: feature:169996-170038:1:exon
so has part: feature:170336-170392:1:exon
so has part: feature:170676-170738:1:exon
so has part: feature:172618-172985:1:exon

XP_015481769.1
type: Protein
SIO_000068: ncbiprotein

position:166717:1
position: 166717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166717-166872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168641-168778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169996-170038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170336-170392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170676-170738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:172618-172985:1:exon

CD40LG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CD40LG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD40 ligand isoform X2
translation: MNEPYGPEAPRPISSTSPGIMKMFMGFLTLFIVAQTIGTVLFCLYLHMKMDKMEEVLSLSEDYIFLKKVQKCQTTEGQKSTLLDCEKIMKGFQSIQCKDEPLKEQPKFEMQRGPEHREHAHLMHKNETSMAAEKRKPVAVHLAGQQSNKAGSVLEWKETMYGPTNSLISNKEGKLKEEDRLLVKGQKTQSTLKSHCELQSIRVGGVFNLREGDMVFVNVTDSTKVKYSHGNTYLGIFKV
SIO_010081: CD40LG
subclass of: SO_0000673
so part of: CD40LG
location: join(166717..166872,168641..168778,169996..170038,170336..170392,170676..170738,172618..172688,172794..172985)
location: region:166717-172985:1
so has part: feature:166717-166872:1:exon
so has part: feature:168641-168778:1:exon
so has part: feature:169996-170038:1:exon
so has part: feature:170336-170392:1:exon
so has part: feature:170676-170738:1:exon
so has part: feature:172618-172688:1:exon
so has part: feature:172794-172985:1:exon

XP_015481770.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:166717-166872:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:168641-168778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:169996-170038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:170336-170392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:170676-170738:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:172618-172688:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:172794-172985:1:exon

ARHGEF6
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(176909..218291)
location: region:176909-218291:-1
so has part: feature:176909-218291:-1:exon
subclass of: SO_0000010

107203828
type: Gene
SIO_000068: ncbigene

position:176909:-1
position: 176909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:218291:-1
position: 218291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176909-218291:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015626276.3
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(176909..179246,180142..180196,181028..181127,181831..181920,183043..183136,186723..186848,187613..187746,188607..188685,189649..189735,190600..190746,192889..192948,194709..194847,196128..196250,197091..197186,197843..197937,199097..199167,201666..201867,202279..202406,206991..207075,214977..215060,216069..218291))
location: region:176909-218291:-1
so has part: feature:216069-218291:-1:exon
so has part: feature:214977-215060:-1:exon
so has part: feature:206991-207075:-1:exon
so has part: feature:202279-202406:-1:exon
so has part: feature:201666-201867:-1:exon
so has part: feature:199097-199167:-1:exon
so has part: feature:197843-197937:-1:exon
so has part: feature:197091-197186:-1:exon
so has part: feature:196128-196250:-1:exon
so has part: feature:194709-194847:-1:exon
so has part: feature:192889-192948:-1:exon
so has part: feature:190600-190746:-1:exon
so has part: feature:189649-189735:-1:exon
so has part: feature:188607-188685:-1:exon
so has part: feature:187613-187746:-1:exon
so has part: feature:186723-186848:-1:exon
so has part: feature:183043-183136:-1:exon
so has part: feature:181831-181920:-1:exon
so has part: feature:181028-181127:-1:exon
so has part: feature:180142-180196:-1:exon
so has part: feature:176909-179246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:216069-218291:-1:exon

position:216069:-1
position: 216069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214977-215060:-1:exon

position:214977:-1
position: 214977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:215060:-1
position: 215060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206991-207075:-1:exon

position:206991:-1
position: 206991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:207075:-1
position: 207075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202279-202406:-1:exon

position:202279:-1
position: 202279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202406:-1
position: 202406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:201666-201867:-1:exon

position:201666:-1
position: 201666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201867:-1
position: 201867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199097-199167:-1:exon

position:199097:-1
position: 199097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199167:-1
position: 199167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:197843-197937:-1:exon

position:197843:-1
position: 197843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197937:-1
position: 197937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:197091-197186:-1:exon

position:197091:-1
position: 197091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197186:-1
position: 197186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:196128-196250:-1:exon

position:196128:-1
position: 196128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196250:-1
position: 196250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:194709-194847:-1:exon

position:194709:-1
position: 194709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194847:-1
position: 194847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:192889-192948:-1:exon

position:192889:-1
position: 192889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192948:-1
position: 192948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:190600-190746:-1:exon

position:190600:-1
position: 190600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190746:-1
position: 190746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:189649-189735:-1:exon

position:189649:-1
position: 189649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189735:-1
position: 189735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:188607-188685:-1:exon

position:188607:-1
position: 188607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188685:-1
position: 188685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:187613-187746:-1:exon

position:187613:-1
position: 187613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187746:-1
position: 187746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:186723-186848:-1:exon

position:186723:-1
position: 186723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186848:-1
position: 186848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:183043-183136:-1:exon

position:183043:-1
position: 183043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183136:-1
position: 183136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:181831-181920:-1:exon

position:181831:-1
position: 181831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181920:-1
position: 181920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:181028-181127:-1:exon

position:181028:-1
position: 181028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181127:-1
position: 181127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:180142-180196:-1:exon

position:180142:-1
position: 180142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180196:-1
position: 180196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:176909-179246:-1:exon

position:179246:-1
position: 179246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_015626275.3
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(176909..179246,180142..180196,181028..181127,181831..181920,183043..183136,183939..183959,186723..186848,187613..187746,188607..188685,189649..189735,190600..190746,192889..192948,194709..194847,196128..196250,197091..197186,197843..197937,199097..199167,201666..201867,202279..202406,206991..207075,214977..215060,216069..218291))
location: region:176909-218291:-1
so has part: feature:216069-218291:-1:exon
so has part: feature:214977-215060:-1:exon
so has part: feature:206991-207075:-1:exon
so has part: feature:202279-202406:-1:exon
so has part: feature:201666-201867:-1:exon
so has part: feature:199097-199167:-1:exon
so has part: feature:197843-197937:-1:exon
so has part: feature:197091-197186:-1:exon
so has part: feature:196128-196250:-1:exon
so has part: feature:194709-194847:-1:exon
so has part: feature:192889-192948:-1:exon
so has part: feature:190600-190746:-1:exon
so has part: feature:189649-189735:-1:exon
so has part: feature:188607-188685:-1:exon
so has part: feature:187613-187746:-1:exon
so has part: feature:186723-186848:-1:exon
so has part: feature:183939-183959:-1:exon
so has part: feature:183043-183136:-1:exon
so has part: feature:181831-181920:-1:exon
so has part: feature:181028-181127:-1:exon
so has part: feature:180142-180196:-1:exon
so has part: feature:176909-179246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:216069-218291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214977-215060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206991-207075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202279-202406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201666-201867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199097-199167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197843-197937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197091-197186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196128-196250:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194709-194847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192889-192948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190600-190746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:189649-189735:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188607-188685:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:187613-187746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:186723-186848:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:183939-183959:-1:exon

position:183939:-1
position: 183939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183959:-1
position: 183959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:183043-183136:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:181831-181920:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:181028-181127:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:180142-180196:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:176909-179246:-1:exon

ARHGEF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ARHGEF6
product: Rac/Cdc42 guanine nucleotide exchange factor 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015626278.3
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(176909..179246,180142..180196,181028..181127,181831..181920,183043..183136,183939..183959,186723..186848,187613..187746,188607..188685,189649..189735,190600..190746,192889..192948,194709..194847,196128..196250,197091..197186,197843..197937,199097..199167,201666..201867,202279..202406,206991..207075,210024..210067))
location: region:176909-210067:-1
so has part: feature:210024-210067:-1:exon
so has part: feature:206991-207075:-1:exon
so has part: feature:202279-202406:-1:exon
so has part: feature:201666-201867:-1:exon
so has part: feature:199097-199167:-1:exon
so has part: feature:197843-197937:-1:exon
so has part: feature:197091-197186:-1:exon
so has part: feature:196128-196250:-1:exon
so has part: feature:194709-194847:-1:exon
so has part: feature:192889-192948:-1:exon
so has part: feature:190600-190746:-1:exon
so has part: feature:189649-189735:-1:exon
so has part: feature:188607-188685:-1:exon
so has part: feature:187613-187746:-1:exon
so has part: feature:186723-186848:-1:exon
so has part: feature:183939-183959:-1:exon
so has part: feature:183043-183136:-1:exon
so has part: feature:181831-181920:-1:exon
so has part: feature:181028-181127:-1:exon
so has part: feature:180142-180196:-1:exon
so has part: feature:176909-179246:-1:exon

position:210067:-1
position: 210067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210024-210067:-1:exon

position:210024:-1
position: 210024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:206991-207075:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:202279-202406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:201666-201867:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:199097-199167:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197843-197937:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197091-197186:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196128-196250:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:194709-194847:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:192889-192948:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:190600-190746:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:189649-189735:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:188607-188685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:187613-187746:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:186723-186848:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183939-183959:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:183043-183136:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:181831-181920:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:181028-181127:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180142-180196:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:176909-179246:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X2
translation: MNPEEQIITWLISLGVLNSPKKVVDDPEGFLKTSLKDGTVLCKLIHRLLPGSAEKYCLEPKNEADCISNIQEFLKGCAFLKVEVFDPHDLYTGDQFSKVLSTLTAINKATEDQLSKGPCSHLSSLNSAAGDAQSDSNSTASQSARGLRRQSKPVEMTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTEKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSAGDIMALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLEKYVTLLQELERHMEEAHADHEDVLKAVTSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNIIYMSQVMVQSGGNEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMTLTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWLDHLQRLTKGTYSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKEDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQMVMEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(179106..179246,180142..180196,181028..181127,181831..181920,183043..183136,186723..186848,187613..187746,188607..188685,189649..189735,190600..190746,192889..192948,194709..194847,196128..196250,197091..197186,197843..197937,199097..199167,201666..201867,202279..202406,206991..207075,214977..215060,216069..216233))
location: region:179106-216233:-1
so has part: feature:216069-216233:-1:exon
so has part: feature:214977-215060:-1:exon
so has part: feature:206991-207075:-1:exon
so has part: feature:202279-202406:-1:exon
so has part: feature:201666-201867:-1:exon
so has part: feature:199097-199167:-1:exon
so has part: feature:197843-197937:-1:exon
so has part: feature:197091-197186:-1:exon
so has part: feature:196128-196250:-1:exon
so has part: feature:194709-194847:-1:exon
so has part: feature:192889-192948:-1:exon
so has part: feature:190600-190746:-1:exon
so has part: feature:189649-189735:-1:exon
so has part: feature:188607-188685:-1:exon
so has part: feature:187613-187746:-1:exon
so has part: feature:186723-186848:-1:exon
so has part: feature:183043-183136:-1:exon
so has part: feature:181831-181920:-1:exon
so has part: feature:181028-181127:-1:exon
so has part: feature:180142-180196:-1:exon
so has part: feature:179106-179246:-1:exon

XP_015481762.1
type: Protein
SIO_000068: ncbiprotein

position:179106:-1
position: 179106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:216233:-1
position: 216233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:216069-216233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214977-215060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206991-207075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202279-202406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201666-201867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199097-199167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197843-197937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197091-197186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196128-196250:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194709-194847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192889-192948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190600-190746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:189649-189735:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188607-188685:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:187613-187746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:186723-186848:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:183043-183136:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:181831-181920:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:181028-181127:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:180142-180196:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:179106-179246:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X1
translation: MNPEEQIITWLISLGVLNSPKKVVDDPEGFLKTSLKDGTVLCKLIHRLLPGSAEKYCLEPKNEADCISNIQEFLKGCAFLKVEVFDPHDLYTGDQFSKVLSTLTAINKATEDQLSKGPCSHLSSLNSAAGDAQSDSNSTASQSARGLRRQSKPVEMTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTEKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSAGDIMALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLEKYVTLLQELERHMEEAHADHEDVLKAVTSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNIIYMSQVMVQSGGNEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMTLTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWLDHLQRLTKGTYSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQMVMEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(179106..179246,180142..180196,181028..181127,181831..181920,183043..183136,183939..183959,186723..186848,187613..187746,188607..188685,189649..189735,190600..190746,192889..192948,194709..194847,196128..196250,197091..197186,197843..197937,199097..199167,201666..201867,202279..202406,206991..207075,214977..215060,216069..216233))
location: region:179106-216233:-1
so has part: feature:216069-216233:-1:exon
so has part: feature:214977-215060:-1:exon
so has part: feature:206991-207075:-1:exon
so has part: feature:202279-202406:-1:exon
so has part: feature:201666-201867:-1:exon
so has part: feature:199097-199167:-1:exon
so has part: feature:197843-197937:-1:exon
so has part: feature:197091-197186:-1:exon
so has part: feature:196128-196250:-1:exon
so has part: feature:194709-194847:-1:exon
so has part: feature:192889-192948:-1:exon
so has part: feature:190600-190746:-1:exon
so has part: feature:189649-189735:-1:exon
so has part: feature:188607-188685:-1:exon
so has part: feature:187613-187746:-1:exon
so has part: feature:186723-186848:-1:exon
so has part: feature:183939-183959:-1:exon
so has part: feature:183043-183136:-1:exon
so has part: feature:181831-181920:-1:exon
so has part: feature:181028-181127:-1:exon
so has part: feature:180142-180196:-1:exon
so has part: feature:179106-179246:-1:exon

XP_015481761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:216069-216233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:214977-215060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206991-207075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202279-202406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:201666-201867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199097-199167:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197843-197937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:197091-197186:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:196128-196250:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:194709-194847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192889-192948:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:190600-190746:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:189649-189735:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:188607-188685:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:187613-187746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:186723-186848:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:183939-183959:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:183043-183136:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:181831-181920:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:181028-181127:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:180142-180196:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:179106-179246:-1:exon

ARHGEF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ARHGEF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 6 isoform X3
translation: MTENGSHQLVVKARFNFKQTNEDELSVNKGDIIYVTRVEEGGWWEGTLNGKTGWFPSNYVREIKSTEKPLSPKALKGLENTQLTKNYYPVVLQNILETERDYAKELQSLLGTYLRPLQSYDKLSAGDIMALLGNMEEISAFQQTLNQALEEVAKLPENQQRVGGCFMNLMPQFRSLYLTYCANHPSAVNVLTQHSDELEKFMESQGAASPGILILTTSLSKPFLRLEKYVTLLQELERHMEEAHADHEDVLKAVTSFKSLVSQCQELRKRKQLELQILSESIQRWEGEDIKMMGNIIYMSQVMVQSGGNEEKEERYFLLFSNVLLMLSASPRMSGFIYQGKLPLTGMTLTKLEDAEGNEHMFEITGNMMERITVSCSTSQDLHEWLDHLQRLTKGTYSTVSKTQSWSPHSTFSSAGQIRGPLEPPKILKPWSLSCLRPAPPLRPSAALSYKERMSYILKDSSKSPKTMKKFLPKRKTERKPSDEEFVIRKSTAALEEDAQILKVIEAYCTGAGFQQALSSGSRKDSIPQVLLPEEEKIIIEETRSNGQMVMEEKSLVDTVYALKDEVKELKQENKRMKQCLEEELKSRKDLEKLVRRLLKQTDECGREDTGRKSSLIA
SIO_010081: ARHGEF6
subclass of: SO_0000673
so part of: ARHGEF6
location: complement(join(179106..179246,180142..180196,181028..181127,181831..181920,183043..183136,183939..183959,186723..186848,187613..187746,188607..188685,189649..189735,190600..190746,192889..192948,194709..194847,196128..196250,197091..197186,197843..197937,199097..199167,201666..201864))
location: region:179106-201864:-1
so has part: feature:201666-201864:-1:exon
so has part: feature:199097-199167:-1:exon
so has part: feature:197843-197937:-1:exon
so has part: feature:197091-197186:-1:exon
so has part: feature:196128-196250:-1:exon
so has part: feature:194709-194847:-1:exon
so has part: feature:192889-192948:-1:exon
so has part: feature:190600-190746:-1:exon
so has part: feature:189649-189735:-1:exon
so has part: feature:188607-188685:-1:exon
so has part: feature:187613-187746:-1:exon
so has part: feature:186723-186848:-1:exon
so has part: feature:183939-183959:-1:exon
so has part: feature:183043-183136:-1:exon
so has part: feature:181831-181920:-1:exon
so has part: feature:181028-181127:-1:exon
so has part: feature:180142-180196:-1:exon
so has part: feature:179106-179246:-1:exon

XP_015481764.1
type: Protein
SIO_000068: ncbiprotein

position:201864:-1
position: 201864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201666-201864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199097-199167:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:197843-197937:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197091-197186:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196128-196250:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194709-194847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:192889-192948:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190600-190746:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:189649-189735:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:188607-188685:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187613-187746:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:186723-186848:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:183939-183959:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:183043-183136:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:181831-181920:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:181028-181127:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:180142-180196:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:179106-179246:-1:exon

RBMX
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(223107..233605)
location: region:223107-233605:-1
so has part: feature:223107-233605:-1:exon
subclass of: SO_0000010

107203829
type: Gene
SIO_000068: ncbigene

position:223107:-1
position: 223107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233605:-1
position: 233605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223107-233605:-1:exon

RBMX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: RBMX
product: RNA binding motif protein X-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_015626282.2
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(223107..223708,224212..224300,224392..224517,224634..224748,225104..225220,226287..226458,231871..231977,232171..232300,233510..233605))
location: region:223107-233605:-1
so has part: feature:233510-233605:-1:exon
so has part: feature:232171-232300:-1:exon
so has part: feature:231871-231977:-1:exon
so has part: feature:226287-226458:-1:exon
so has part: feature:225104-225220:-1:exon
so has part: feature:224634-224748:-1:exon
so has part: feature:224392-224517:-1:exon
so has part: feature:224212-224300:-1:exon
so has part: feature:223107-223708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:233510-233605:-1:exon

position:233510:-1
position: 233510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232171-232300:-1:exon

position:232171:-1
position: 232171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232300:-1
position: 232300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231871-231977:-1:exon

position:231871:-1
position: 231871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231977:-1
position: 231977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:226287-226458:-1:exon

position:226287:-1
position: 226287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226458:-1
position: 226458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:225104-225220:-1:exon

position:225104:-1
position: 225104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225220:-1
position: 225220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:224634-224748:-1:exon

position:224634:-1
position: 224634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224748:-1
position: 224748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:224392-224517:-1:exon

position:224392:-1
position: 224392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224517:-1
position: 224517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:224212-224300:-1:exon

position:224212:-1
position: 224212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224300:-1
position: 224300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:223107-223708:-1:exon

position:223708:-1
position: 223708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBMX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: RBMX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome
translation: MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGGRRGPPPPPRSRGPPRGLRGARGGSGARGPPSRGSHLGSSRGPLPMKRGPPPRSGGPPPKRSAPSGPVRSSSMGGRAPVSRGRDGYGGPPRREPMPSRRDVYMSPRDDGYSTKDGYSSRDYPSSRDTRDYAPPPRDYAYRDYGHSSSRDEYPSRGYSDRDGYGGGRDRDYSDHPSGGSYRDSYESYGNSRSAPPARGPPPSYGGSSRYDDYGSTRDGYGSRESYSSSRSDVYSSGRDRVGRQDRGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY
SIO_010081: RBMX
subclass of: SO_0000673
so part of: RBMX
location: complement(join(223401..223708,224212..224300,224392..224517,224634..224748,225104..225220,226287..226458,231871..231977,232171..232279))
location: region:223401-232279:-1
so has part: feature:232171-232279:-1:exon
so has part: feature:231871-231977:-1:exon
so has part: feature:226287-226458:-1:exon
so has part: feature:225104-225220:-1:exon
so has part: feature:224634-224748:-1:exon
so has part: feature:224392-224517:-1:exon
so has part: feature:224212-224300:-1:exon
so has part: feature:223401-223708:-1:exon

XP_015481768.1
type: Protein
SIO_000068: ncbiprotein

position:223401:-1
position: 223401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232279:-1
position: 232279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232171-232279:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231871-231977:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:226287-226458:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:225104-225220:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:224634-224748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:224392-224517:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:224212-224300:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:223401-223708:-1:exon

LOC117244392
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117244392
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(232051..232123)
location: region:232051-232123:-1
so has part: feature:232051-232123:-1:exon
subclass of: SO_0000578

117244392
type: Gene
SIO_000068: ncbigene

position:232051:-1
position: 232051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232123:-1
position: 232123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232051-232123:-1:exon

LOC117244392
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: snoRNA
gene: LOC117244392
product: small nucleolar RNA SNORD61
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00270
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004497361.1
SIO_010081: LOC117244392
subclass of: SO_0000673
so part of: LOC117244392
location: complement(232051..232123)
location: region:232051-232123:-1
so has part: feature:232051-232123:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:232051-232123:-1:exon

LOC107203928
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107203928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 238971..266218
location: region:238971-266218:1
so has part: feature:238971-266218:1:exon
subclass of: SO_0000010

107203928
type: Gene
SIO_000068: ncbigene

position:238971:1
position: 238971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266218:1
position: 266218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238971-266218:1:exon

LOC107203928
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9157
gene: LOC107203928
product: transmembrane 9 superfamily member 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004497239.1
SIO_010081: LOC107203928
so part of: LOC107203928
location: join(238971..239189,239555..239622,240904..240997,242589..242716,242940..243069,243978..244105,245153..245264,247400..247479,248383..248491,251670..251802,252897..253016,253183..253240,255579..255738,256392..256543,258049..258160,258575..258746,261479..261558,265574..266218)
location: region:238971-266218:1
so has part: feature:238971-239189:1:exon
so has part: feature:239555-239622:1:exon
so has part: feature:240904-240997:1:exon
so has part: feature:242589-242716:1:exon
so has part: feature:242940-243069:1:exon
so has part: feature:243978-244105:1:exon
so has part: feature:245153-245264:1:exon
so has part: feature:247400-247479:1:exon
so has part: feature:248383-248491:1:exon
so has part: feature:251670-251802:1:exon
so has part: feature:252897-253016:1:exon
so has part: feature:253183-253240:1:exon
so has part: feature:255579-255738:1:exon
so has part: feature:256392-256543:1:exon
so has part: feature:258049-258160:1:exon
so has part: feature:258575-258746:1:exon
so has part: feature:261479-261558:1:exon
so has part: feature:265574-266218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238971-239189:1:exon

position:239189:1
position: 239189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239555-239622:1:exon

position:239555:1
position: 239555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239622:1
position: 239622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:240904-240997:1:exon

position:240904:1
position: 240904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240997:1
position: 240997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:242589-242716:1:exon

position:242589:1
position: 242589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242716:1
position: 242716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:242940-243069:1:exon

position:242940:1
position: 242940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:243069:1
position: 243069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:243978-244105:1:exon

position:243978:1
position: 243978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244105:1
position: 244105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:245153-245264:1:exon

position:245153:1
position: 245153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245264:1
position: 245264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:247400-247479:1:exon

position:247400:1
position: 247400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:247479:1
position: 247479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:248383-248491:1:exon

position:248383:1
position: 248383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:248491:1
position: 248491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:251670-251802:1:exon

position:251670:1
position: 251670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251802:1
position: 251802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:252897-253016:1:exon

position:252897:1
position: 252897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253016:1
position: 253016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:253183-253240:1:exon

position:253183:1
position: 253183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:253240:1
position: 253240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:255579-255738:1:exon

position:255579:1
position: 255579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:255738:1
position: 255738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:256392-256543:1:exon

position:256392:1
position: 256392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:256543:1
position: 256543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:258049-258160:1:exon

position:258049:1
position: 258049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258160:1
position: 258160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:258575-258746:1:exon

position:258575:1
position: 258575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258746:1
position: 258746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:261479-261558:1:exon

position:261479:1
position: 261479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261558:1
position: 261558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:265574-266218:1:exon

position:265574:1
position: 265574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107203928
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107203928
product: transmembrane 9 superfamily member 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_015626573.3
SIO_010081: LOC107203928
subclass of: SO_0000673
so part of: LOC107203928
location: join(238972..239189,239555..239622,240904..240997,242589..242716,242940..243069,243978..244105,245153..245264,247400..247479,248383..248491,251670..251802,252897..253016,253183..253240,255579..255738,256392..256543,258049..258160,258575..258746,265574..266218)
location: region:238972-266218:1
so has part: feature:238972-239189:1:exon
so has part: feature:239555-239622:1:exon
so has part: feature:240904-240997:1:exon
so has part: feature:242589-242716:1:exon
so has part: feature:242940-243069:1:exon
so has part: feature:243978-244105:1:exon
so has part: feature:245153-245264:1:exon
so has part: feature:247400-247479:1:exon
so has part: feature:248383-248491:1:exon
so has part: feature:251670-251802:1:exon
so has part: feature:252897-253016:1:exon
so has part: feature:253183-253240:1:exon
so has part: feature:255579-255738:1:exon
so has part: feature:256392-256543:1:exon
so has part: feature:258049-258160:1:exon
so has part: feature:258575-258746:1:exon
so has part: feature:265574-266218:1:exon

position:238972:1
position: 238972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238972-239189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239555-239622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240904-240997:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242589-242716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242940-243069:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243978-244105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245153-245264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247400-247479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:248383-248491:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251670-251802:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252897-253016:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:253183-253240:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255579-255738:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256392-256543:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:258049-258160:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:258575-258746:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:265574-266218:1:exon

LOC107203928
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107203928
product: transmembrane 9 superfamily member 2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_033514039.1
SIO_010081: LOC107203928
subclass of: SO_0000673
so part of: LOC107203928
location: join(238972..239189,242589..242716,242940..243069,243978..244105,245153..245264,247400..247479,248383..248491,251670..251802,252897..253016,253183..253240,255579..255738,256392..256543,258049..258160,258575..258746,265574..266218)
location: region:238972-266218:1
so has part: feature:238972-239189:1:exon
so has part: feature:242589-242716:1:exon
so has part: feature:242940-243069:1:exon
so has part: feature:243978-244105:1:exon
so has part: feature:245153-245264:1:exon
so has part: feature:247400-247479:1:exon
so has part: feature:248383-248491:1:exon
so has part: feature:251670-251802:1:exon
so has part: feature:252897-253016:1:exon
so has part: feature:253183-253240:1:exon
so has part: feature:255579-255738:1:exon
so has part: feature:256392-256543:1:exon
so has part: feature:258049-258160:1:exon
so has part: feature:258575-258746:1:exon
so has part: feature:265574-266218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238972-239189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242589-242716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242940-243069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243978-244105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245153-245264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247400-247479:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:248383-248491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251670-251802:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:252897-253016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253183-253240:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:255579-255738:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256392-256543:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:258049-258160:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:258575-258746:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:265574-266218:1:exon

LOC107203928
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107203928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 2-like isoform X1
translation: MRLLAATLLLVAPLGAAFYLPGLAPVSFCEEGEETESCKSLIELFVNRLDSVESVLPYEYDAFDFCQDKEEKRPSENLGQVLFGERIASSPYKFTFKKQETCKKVCTRTYDPGNSADKSKLAFLKKGMQLNYQHHWIIDNMPVTWCYDVEDGQKYCNPGFPIGCFVTPDGRVKDACVINSEFNKKNTFYLFNHVDITIMYHSGKDENWPGARLVMARLRPQSYKHTDENNLSCEGPPMEIPGEFTNKLNLVYTYSVTFEEKNSIKWASRWDYILESMPHTNIQWFSIMNSLVIVLFLSGMVAMIILRTLHKDIARYNQIDSSEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGQGTQIFIMTFITLFLACLGFLSPANRGALMTCAVVLWVLLGTPAGYVSARMYKTFRGEKWKTNVLLTALLCPGIVFADFFIMNLILWVKGSSAAIPFGTLVAILAMWFGISVPLTFVGAYFGFKEKPIEHPVRTNQIPRQIPEQSFFTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILLITCSEATVLLCYFHLCAEDYHWWWRSFLTSSFTAVYLFIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVSKIYSVVKVD
SIO_010081: LOC107203928
subclass of: SO_0000673
so part of: LOC107203928
location: join(239073..239189,239555..239622,240904..240997,242589..242716,242940..243069,243978..244105,245153..245264,247400..247479,248383..248491,251670..251802,252897..253016,253183..253240,255579..255738,256392..256543,258049..258160,258575..258746,265574..265641)
location: region:239073-265641:1
so has part: feature:239073-239189:1:exon
so has part: feature:239555-239622:1:exon
so has part: feature:240904-240997:1:exon
so has part: feature:242589-242716:1:exon
so has part: feature:242940-243069:1:exon
so has part: feature:243978-244105:1:exon
so has part: feature:245153-245264:1:exon
so has part: feature:247400-247479:1:exon
so has part: feature:248383-248491:1:exon
so has part: feature:251670-251802:1:exon
so has part: feature:252897-253016:1:exon
so has part: feature:253183-253240:1:exon
so has part: feature:255579-255738:1:exon
so has part: feature:256392-256543:1:exon
so has part: feature:258049-258160:1:exon
so has part: feature:258575-258746:1:exon
so has part: feature:265574-265641:1:exon

XP_015482059.1
type: Protein
SIO_000068: ncbiprotein

position:239073:1
position: 239073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265641:1
position: 265641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239073-239189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239555-239622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:240904-240997:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:242589-242716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:242940-243069:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243978-244105:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:245153-245264:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:247400-247479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:248383-248491:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251670-251802:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:252897-253016:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:253183-253240:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:255579-255738:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:256392-256543:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:258049-258160:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:258575-258746:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:265574-265641:1:exon

LOC107203928
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107203928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 2-like isoform X2
translation: MRLLAATLLLVAPLGAAFYLPGLAPVSFCEEGEETESCKFTFKKQETCKKVCTRTYDPGNSADKSKLAFLKKGMQLNYQHHWIIDNMPVTWCYDVEDGQKYCNPGFPIGCFVTPDGRVKDACVINSEFNKKNTFYLFNHVDITIMYHSGKDENWPGARLVMARLRPQSYKHTDENNLSCEGPPMEIPGEFTNKLNLVYTYSVTFEEKNSIKWASRWDYILESMPHTNIQWFSIMNSLVIVLFLSGMVAMIILRTLHKDIARYNQIDSSEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGQGTQIFIMTFITLFLACLGFLSPANRGALMTCAVVLWVLLGTPAGYVSARMYKTFRGEKWKTNVLLTALLCPGIVFADFFIMNLILWVKGSSAAIPFGTLVAILAMWFGISVPLTFVGAYFGFKEKPIEHPVRTNQIPRQIPEQSFFTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILLITCSEATVLLCYFHLCAEDYHWWWRSFLTSSFTAVYLFIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVSKIYSVVKVD
SIO_010081: LOC107203928
subclass of: SO_0000673
so part of: LOC107203928
location: join(239073..239189,242589..242716,242940..243069,243978..244105,245153..245264,247400..247479,248383..248491,251670..251802,252897..253016,253183..253240,255579..255738,256392..256543,258049..258160,258575..258746,265574..265641)
location: region:239073-265641:1
so has part: feature:239073-239189:1:exon
so has part: feature:242589-242716:1:exon
so has part: feature:242940-243069:1:exon
so has part: feature:243978-244105:1:exon
so has part: feature:245153-245264:1:exon
so has part: feature:247400-247479:1:exon
so has part: feature:248383-248491:1:exon
so has part: feature:251670-251802:1:exon
so has part: feature:252897-253016:1:exon
so has part: feature:253183-253240:1:exon
so has part: feature:255579-255738:1:exon
so has part: feature:256392-256543:1:exon
so has part: feature:258049-258160:1:exon
so has part: feature:258575-258746:1:exon
so has part: feature:265574-265641:1:exon

XP_033369930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:239073-239189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242589-242716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242940-243069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243978-244105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245153-245264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247400-247479:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:248383-248491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251670-251802:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:252897-253016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253183-253240:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:255579-255738:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256392-256543:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:258049-258160:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:258575-258746:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:265574-265641:1:exon

LOC107203928
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107203928
product: transmembrane 9 superfamily member 2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_019006548.2
SIO_010081: LOC107203928
subclass of: SO_0000673
so part of: LOC107203928
location: join(239555..239622,242589..242716,242940..243069,243978..244105,245153..245264,247400..247479,248383..248491,251670..251802,252897..253016,253183..253240,255579..255738,256392..256543,258049..258160,258575..258746,265574..266218)
location: region:239555-266218:1
so has part: feature:239555-239622:1:exon
so has part: feature:242589-242716:1:exon
so has part: feature:242940-243069:1:exon
so has part: feature:243978-244105:1:exon
so has part: feature:245153-245264:1:exon
so has part: feature:247400-247479:1:exon
so has part: feature:248383-248491:1:exon
so has part: feature:251670-251802:1:exon
so has part: feature:252897-253016:1:exon
so has part: feature:253183-253240:1:exon
so has part: feature:255579-255738:1:exon
so has part: feature:256392-256543:1:exon
so has part: feature:258049-258160:1:exon
so has part: feature:258575-258746:1:exon
so has part: feature:265574-266218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:239555-239622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242589-242716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:242940-243069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:243978-244105:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245153-245264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247400-247479:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:248383-248491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:251670-251802:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:252897-253016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:253183-253240:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:255579-255738:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:256392-256543:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:258049-258160:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:258575-258746:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:265574-266218:1:exon

LOC107203928
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107203928
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane 9 superfamily member 2-like isoform X3
translation: MQLNYQHHWIIDNMPVTWCYDVEDGQKYCNPGFPIGCFVTPDGRVKDACVINSEFNKKNTFYLFNHVDITIMYHSGKDENWPGARLVMARLRPQSYKHTDENNLSCEGPPMEIPGEFTNKLNLVYTYSVTFEEKNSIKWASRWDYILESMPHTNIQWFSIMNSLVIVLFLSGMVAMIILRTLHKDIARYNQIDSSEDAQEEFGWKLVHGDVFRPPRKGMLLSVFLGQGTQIFIMTFITLFLACLGFLSPANRGALMTCAVVLWVLLGTPAGYVSARMYKTFRGEKWKTNVLLTALLCPGIVFADFFIMNLILWVKGSSAAIPFGTLVAILAMWFGISVPLTFVGAYFGFKEKPIEHPVRTNQIPRQIPEQSFFTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILLITCSEATVLLCYFHLCAEDYHWWWRSFLTSSFTAVYLFIYAVHYFFSKLQITGTASTILYFGYTMIMVLIFFLFTGTIGFFACFWFVSKIYSVVKVD
SIO_010081: LOC107203928
subclass of: SO_0000673
so part of: LOC107203928
location: join(242691..242716,242940..243069,243978..244105,245153..245264,247400..247479,248383..248491,251670..251802,252897..253016,253183..253240,255579..255738,256392..256543,258049..258160,258575..258746,265574..265641)
location: region:242691-265641:1
so has part: feature:242691-242716:1:exon
so has part: feature:242940-243069:1:exon
so has part: feature:243978-244105:1:exon
so has part: feature:245153-245264:1:exon
so has part: feature:247400-247479:1:exon
so has part: feature:248383-248491:1:exon
so has part: feature:251670-251802:1:exon
so has part: feature:252897-253016:1:exon
so has part: feature:253183-253240:1:exon
so has part: feature:255579-255738:1:exon
so has part: feature:256392-256543:1:exon
so has part: feature:258049-258160:1:exon
so has part: feature:258575-258746:1:exon
so has part: feature:265574-265641:1:exon

XP_018862093.1
type: Protein
SIO_000068: ncbiprotein

position:242691:1
position: 242691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242691-242716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242940-243069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243978-244105:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245153-245264:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:247400-247479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:248383-248491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:251670-251802:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:252897-253016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:253183-253240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:255579-255738:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256392-256543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:258049-258160:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:258575-258746:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:265574-265641:1:exon

ZIC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 378374..382768
location: region:378374-382768:1
so has part: feature:378374-382768:1:exon
subclass of: SO_0000010

107204025
type: Gene
SIO_000068: ncbigene

position:378374:1
position: 378374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382768:1
position: 382768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378374-382768:1:exon

ZIC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZIC3
product: Zic family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 26 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015626786.1
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(378374..379466,380105..380268,380861..382178,382317..382768)
location: region:378374-382768:1
so has part: feature:378374-379466:1:exon
so has part: feature:380105-380268:1:exon
so has part: feature:380861-382178:1:exon
so has part: feature:382317-382768:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:378374-379466:1:exon

position:379466:1
position: 379466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:380105-380268:1:exon

position:380105:1
position: 380105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380268:1
position: 380268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:380861-382178:1:exon

position:380861:1
position: 380861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382178:1
position: 382178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:382317-382768:1:exon

position:382317:1
position: 382317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZIC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 3
translation: MTMLLDGGPQFPALGVGGFAAPRHHDMPGRDAAGGGMGLGPFGDSSHAAAFKLNAAPHDLAAGQSSAFTPQAPGYASALGHHHHHHHHAGQVPSYGGAAAFNSTRDFLFRNRGSGIADAASGTAQHGLFGGSPGGLHGPGGIPDTPGYLLFPGLHEQSPSHTSPNGHVDNGQMHLGLRGDLFGRPDPYRAVSSPRTDPYAGAQFHNYNHMNMNMGMNVAAHHHHHHHHHHGPGAFFRYMRQPIKQELSCKWLDESQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHICYWDECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKVCDKSYTHPSSLRKHMKVHESQGSDSSPAASSGYESSTPPAVGSAGSKDSTKTPPAALQSNPGHNPGLPPNFNEWYV
SIO_010081: ZIC3
subclass of: SO_0000673
so part of: ZIC3
location: join(378419..379466,380105..380268,380861..381043)
location: region:378419-381043:1
so has part: feature:378419-379466:1:exon
so has part: feature:380105-380268:1:exon
so has part: feature:380861-381043:1:exon

XP_015482272.1
type: Protein
SIO_000068: ncbiprotein

position:378419:1
position: 378419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381043:1
position: 381043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:378419-379466:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:380105-380268:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:380861-381043:1:exon

LOC107204026
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107204026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 461526..472163
location: region:461526-472163:1
so has part: feature:461526-472163:1:exon
subclass of: SO_0000011

107204026
type: Gene
SIO_000068: ncbigene

position:461526:1
position: 461526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472163:1
position: 472163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461526-472163:1:exon

LOC107204026
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107204026
product: uncharacterized LOC107204026
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004497338.1
SIO_010081: LOC107204026
subclass of: SO_0000673
so part of: LOC107204026
location: join(461526..461956,467994..471162,471852..472163)
location: region:461526-472163:1
so has part: feature:461526-461956:1:exon
so has part: feature:467994-471162:1:exon
so has part: feature:471852-472163:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:461526-461956:1:exon

position:461956:1
position: 461956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467994-471162:1:exon

position:467994:1
position: 467994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:471162:1
position: 471162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:471852-472163:1:exon

position:471852:1
position: 471852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF13
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(574692..771528)
location: region:574692-771528:-1
so has part: feature:574692-771528:-1:exon
subclass of: SO_0000010

107203921
type: Gene
SIO_000068: ncbigene

position:574692:-1
position: 574692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771528:-1
position: 771528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574692-771528:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGF13
product: fibroblast growth factor 13, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015626546.3
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(574692..576186,576675..576873,617936..618039,621802..621912,771224..771527))
location: region:574692-771527:-1
so has part: feature:771224-771527:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:574692-576186:-1:exon

position:771527:-1
position: 771527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771224-771527:-1:exon

position:771224:-1
position: 771224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621802-621912:-1:exon

position:621802:-1
position: 621802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621912:-1
position: 621912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:617936-618039:-1:exon

position:617936:-1
position: 617936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618039:-1
position: 618039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:576675-576873:-1:exon

position:576675:-1
position: 576675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576873:-1
position: 576873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:574692-576186:-1:exon

position:576186:-1
position: 576186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGF13
product: fibroblast growth factor 13, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015626547.3
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(574692..576186,576675..576873,617936..618039,621802..621912,693476..693764))
location: region:574692-693764:-1
so has part: feature:693476-693764:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:574692-576186:-1:exon

position:693764:-1
position: 693764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693476-693764:-1:exon

position:693476:-1
position: 693476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574692-576186:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGF13
product: fibroblast growth factor 13, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019006549.2
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(574692..576186,576675..576873,617936..618039,621802..621912,636184..636229))
location: region:574692-636229:-1
so has part: feature:636184-636229:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:574692-576186:-1:exon

position:636229:-1
position: 636229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636184-636229:-1:exon

position:636184:-1
position: 636184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574692-576186:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGF13
product: fibroblast growth factor 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_015626543.3
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(574692..576186,576675..576873,617936..618039,621802..621912,623811..624438))
location: region:574692-624438:-1
so has part: feature:623811-624438:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:574692-576186:-1:exon

position:624438:-1
position: 624438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623811-624438:-1:exon

position:623811:-1
position: 623811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574692-576186:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGF13
product: fibroblast growth factor 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015626541.3
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(574772..576186,576675..576873,617936..618039,621802..621912,667059..667226,771224..771528))
location: region:574772-771528:-1
so has part: feature:771224-771528:-1:exon
so has part: feature:667059-667226:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:574772-576186:-1:exon

position:574772:-1
position: 574772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771224-771528:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667059-667226:-1:exon

position:667059:-1
position: 667059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667226:-1
position: 667226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574772-576186:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGF13
product: fibroblast growth factor 13, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015626545.3
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(574772..576186,576675..576873,617936..618039,621802..621912,667059..667226,762438..762530))
location: region:574772-762530:-1
so has part: feature:762438-762530:-1:exon
so has part: feature:667059-667226:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:574772-576186:-1:exon

position:762530:-1
position: 762530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762438-762530:-1:exon

position:762438:-1
position: 762438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667059-667226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574772-576186:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGF13
product: fibroblast growth factor 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015626542.3
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(574772..576186,576675..576873,617936..618039,621802..621912,667059..667226,693476..693766))
location: region:574772-693766:-1
so has part: feature:693476-693766:-1:exon
so has part: feature:667059-667226:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:574772-576186:-1:exon

position:693766:-1
position: 693766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693476-693766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667059-667226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574772-576186:-1:exon

FGF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: FGF13
product: fibroblast growth factor 13, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 ESTs, 28 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015626544.3
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(574772..576186,576675..576873,617936..618039,621802..621912,667059..667226,676781..676851))
location: region:574772-676851:-1
so has part: feature:676781-676851:-1:exon
so has part: feature:667059-667226:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:574772-576186:-1:exon

position:676851:-1
position: 676851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676781-676851:-1:exon

position:676781:-1
position: 676781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:667059-667226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:574772-576186:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X5
translation: MSGKVIKPKEEKDASKEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(576050..576186,576675..576873,617936..618039,621802..621912,771224..771272))
location: region:576050-771272:-1
so has part: feature:771224-771272:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:576050-576186:-1:exon

XP_015482032.1
type: Protein
SIO_000068: ncbiprotein

position:576050:-1
position: 576050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771272:-1
position: 771272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771224-771272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576050-576186:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X1
translation: MSGKVIKPKEEKDASKVMDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(576050..576186,576675..576873,617936..618039,621802..621912,667059..667226,771224..771272))
location: region:576050-771272:-1
so has part: feature:771224-771272:-1:exon
so has part: feature:667059-667226:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:576050-576186:-1:exon

XP_015482027.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:771224-771272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667059-667226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576050-576186:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X7
translation: MGSRWKSIAQEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(576050..576186,576675..576873,617936..618039,621802..621912,693476..693506))
location: region:576050-693506:-1
so has part: feature:693476-693506:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:576050-576186:-1:exon

XP_015482033.1
type: Protein
SIO_000068: ncbiprotein

position:693506:-1
position: 693506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693476-693506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576050-576186:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X2
translation: MGSRWKSIAQVMDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(576050..576186,576675..576873,617936..618039,621802..621912,667059..667226,693476..693506))
location: region:576050-693506:-1
so has part: feature:693476-693506:-1:exon
so has part: feature:667059-667226:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:576050-576186:-1:exon

XP_015482028.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:693476-693506:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:667059-667226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576050-576186:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X4
translation: MDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(576050..576186,576675..576873,617936..618039,621802..621912,667059..667224))
location: region:576050-667224:-1
so has part: feature:667059-667224:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:576050-576186:-1:exon

XP_015482030.1
type: Protein
SIO_000068: ncbiprotein

position:667224:-1
position: 667224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:667059-667224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576050-576186:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X4
translation: MDDAPPGTQEYIMLRQDSIQSAELKKKESPFRAKCHEIFCCPLKQVHLKENTEPEEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(576050..576186,576675..576873,617936..618039,621802..621912,667059..667224))
location: region:576050-667224:-1
so has part: feature:667059-667224:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:576050-576186:-1:exon

XP_015482031.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:667059-667224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576050-576186:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X6
translation: MALGIRKSYSEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(576050..576186,576675..576873,617936..618039,621802..621912,636184..636214))
location: region:576050-636214:-1
so has part: feature:636184-636214:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:576050-576186:-1:exon

XP_018862094.1
type: Protein
SIO_000068: ncbiprotein

position:636214:-1
position: 636214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:636184-636214:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576050-576186:-1:exon

FGF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: FGF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 13 isoform X3
translation: MAAAIASSLIRQKRQAREREKSNACKCVNSPSKSKGSCDKNKLNVFSRVKIFGSKKRRRRRPEPQLKGIVTKLYSRQGYHLQLQADGTIDGTKEEDSSYTLFNLIPVGLRVVAIQGVQTKLYLAMNSEGYLYTSEHFTPECKFKESVFENYYVTYSSMIYRQQQSGRGWYLGLNKEGEIMKGNHVKKNKPAAHFLPKPLKVAMYKEPSLHDLTEFSRSGSGTPTKSRSVSGVLNGGKSMSQNEST
SIO_010081: FGF13
subclass of: SO_0000673
so part of: FGF13
location: complement(join(576050..576186,576675..576873,617936..618039,621802..621912,623811..623997))
location: region:576050-623997:-1
so has part: feature:623811-623997:-1:exon
so has part: feature:621802-621912:-1:exon
so has part: feature:617936-618039:-1:exon
so has part: feature:576675-576873:-1:exon
so has part: feature:576050-576186:-1:exon

XP_015482029.1
type: Protein
SIO_000068: ncbiprotein

position:623997:-1
position: 623997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623811-623997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:621802-621912:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617936-618039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576675-576873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576050-576186:-1:exon

F9
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: F9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 817976..828396
location: region:817976-828396:1
so has part: feature:817976-828396:1:exon
subclass of: SO_0000010

107203652
type: Gene
SIO_000068: ncbigene

position:817976:1
position: 817976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828396:1
position: 828396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817976-828396:1:exon

F9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: F9
product: coagulation factor IX
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_015625946.3
SIO_010081: F9
subclass of: SO_0000673
so part of: F9
location: join(817976..818100,819767..819930,820232..820256,822204..822317,824628..824756,826625..826863,827372..827495,827661..828396)
location: region:817976-828396:1
so has part: feature:817976-818100:1:exon
so has part: feature:819767-819930:1:exon
so has part: feature:820232-820256:1:exon
so has part: feature:822204-822317:1:exon
so has part: feature:824628-824756:1:exon
so has part: feature:826625-826863:1:exon
so has part: feature:827372-827495:1:exon
so has part: feature:827661-828396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:817976-818100:1:exon

position:818100:1
position: 818100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:819767-819930:1:exon

position:819767:1
position: 819767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819930:1
position: 819930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:820232-820256:1:exon

position:820232:1
position: 820232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820256:1
position: 820256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:822204-822317:1:exon

position:822204:1
position: 822204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822317:1
position: 822317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:824628-824756:1:exon

position:824628:1
position: 824628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824756:1
position: 824756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:826625-826863:1:exon

position:826625:1
position: 826625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826863:1
position: 826863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:827372-827495:1:exon

position:827372:1
position: 827372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827495:1
position: 827495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:827661-828396:1:exon

position:827661:1
position: 827661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: F9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor IX
translation: MANIPLILSMCLLGACLGGENTVFIENKEASSVLQRQRRANSNRLEEVIPGNLERECIEEKCSYEEAREVFENEEKTMQFWKTYVDGDQCNPNPCKNGASCEDQINSYVCWCPAGYEGKNCEIDFTCAIKNGGCKHFCSHQPPQKVVCSCAAGYKLAKDGKSCEPTVPYPCGRITAPEAKRKLTRSMNTFEHWNITADDADDGPEEELDNSTDSSAAATARISPVLRTGTRVVGGSDSLKGEVPWQVLLVNSKGLGFCGGSIINEKWVVTAAHCLKPGNTHNLTAVAGEHDLRSDEHTEQRRRVVRLLPHPTYNASINEYHNDIALLELERPLTFNSYVTPVCLGSREFSNALLRQGTGTVSGWGRLLFRGRTATTLQVLKVPFVDRPTCLKSTSTSILQNMFCAGFPSGGRDTCEGDSGGPYTTEIEGTWFLTGITSWGEQCALPGKYGIYTRVSKYVKWIKQNTRLP
SIO_010081: F9
subclass of: SO_0000673
so part of: F9
location: join(818034..818100,819767..819930,820232..820256,822204..822317,824628..824756,826625..826863,827372..827495,827661..828208)
location: region:818034-828208:1
so has part: feature:818034-818100:1:exon
so has part: feature:819767-819930:1:exon
so has part: feature:820232-820256:1:exon
so has part: feature:822204-822317:1:exon
so has part: feature:824628-824756:1:exon
so has part: feature:826625-826863:1:exon
so has part: feature:827372-827495:1:exon
so has part: feature:827661-828208:1:exon

XP_015481432.1
type: Protein
SIO_000068: ncbiprotein

position:818034:1
position: 818034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:828208:1
position: 828208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818034-818100:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:819767-819930:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:820232-820256:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822204-822317:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:824628-824756:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826625-826863:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827372-827495:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:827661-828208:1:exon

MCF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(829416..875730)
location: region:829416-875730:-1
so has part: feature:829416-875730:-1:exon
subclass of: SO_0000010

107204027
type: Gene
SIO_000068: ncbigene

position:829416:-1
position: 829416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875730:-1
position: 875730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829416-875730:-1:exon

MCF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: MCF2
product: MCF.2 cell line derived transforming sequence
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033514142.1
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(829416..831266,835770..835870,837253..837365,837628..837740,837815..837921,838271..838331,838847..838925,839214..839306,842763..842984,843733..843858,844788..844880,845202..845294,845609..845678,845791..845906,847598..847664,847886..847974,848532..848620,852032..852203,852347..852538,853803..853994,855097..855216,855577..855691,856154..856278,859403..859552,860204..860320,862039..862158,867920..868010,874432..874621,875092..875202,875724..875730))
location: region:829416-875730:-1
so has part: feature:875724-875730:-1:exon
so has part: feature:875092-875202:-1:exon
so has part: feature:874432-874621:-1:exon
so has part: feature:867920-868010:-1:exon
so has part: feature:862039-862158:-1:exon
so has part: feature:860204-860320:-1:exon
so has part: feature:859403-859552:-1:exon
so has part: feature:856154-856278:-1:exon
so has part: feature:855577-855691:-1:exon
so has part: feature:855097-855216:-1:exon
so has part: feature:853803-853994:-1:exon
so has part: feature:852347-852538:-1:exon
so has part: feature:852032-852203:-1:exon
so has part: feature:848532-848620:-1:exon
so has part: feature:847886-847974:-1:exon
so has part: feature:847598-847664:-1:exon
so has part: feature:845791-845906:-1:exon
so has part: feature:845609-845678:-1:exon
so has part: feature:845202-845294:-1:exon
so has part: feature:844788-844880:-1:exon
so has part: feature:843733-843858:-1:exon
so has part: feature:842763-842984:-1:exon
so has part: feature:839214-839306:-1:exon
so has part: feature:838847-838925:-1:exon
so has part: feature:838271-838331:-1:exon
so has part: feature:837815-837921:-1:exon
so has part: feature:837628-837740:-1:exon
so has part: feature:837253-837365:-1:exon
so has part: feature:835770-835870:-1:exon
so has part: feature:829416-831266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875724-875730:-1:exon

position:875724:-1
position: 875724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875092-875202:-1:exon

position:875092:-1
position: 875092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875202:-1
position: 875202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:874432-874621:-1:exon

position:874432:-1
position: 874432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874621:-1
position: 874621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:867920-868010:-1:exon

position:867920:-1
position: 867920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868010:-1
position: 868010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:862039-862158:-1:exon

position:862039:-1
position: 862039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:862158:-1
position: 862158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:860204-860320:-1:exon

position:860204:-1
position: 860204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860320:-1
position: 860320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:859403-859552:-1:exon

position:859403:-1
position: 859403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859552:-1
position: 859552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:856154-856278:-1:exon

position:856154:-1
position: 856154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856278:-1
position: 856278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:855577-855691:-1:exon

position:855577:-1
position: 855577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855691:-1
position: 855691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:855097-855216:-1:exon

position:855097:-1
position: 855097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855216:-1
position: 855216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:853803-853994:-1:exon

position:853803:-1
position: 853803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853994:-1
position: 853994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:852347-852538:-1:exon

position:852347:-1
position: 852347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852538:-1
position: 852538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:852032-852203:-1:exon

position:852032:-1
position: 852032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852203:-1
position: 852203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:848532-848620:-1:exon

position:848532:-1
position: 848532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848620:-1
position: 848620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:847886-847974:-1:exon

position:847886:-1
position: 847886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847974:-1
position: 847974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:847598-847664:-1:exon

position:847598:-1
position: 847598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847664:-1
position: 847664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:845791-845906:-1:exon

position:845791:-1
position: 845791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845906:-1
position: 845906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:845609-845678:-1:exon

position:845609:-1
position: 845609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845678:-1
position: 845678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:845202-845294:-1:exon

position:845202:-1
position: 845202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845294:-1
position: 845294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:844788-844880:-1:exon

position:844788:-1
position: 844788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844880:-1
position: 844880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:843733-843858:-1:exon

position:843733:-1
position: 843733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843858:-1
position: 843858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:842763-842984:-1:exon

position:842763:-1
position: 842763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842984:-1
position: 842984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:839214-839306:-1:exon

position:839214:-1
position: 839214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839306:-1
position: 839306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:838847-838925:-1:exon

position:838847:-1
position: 838847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838925:-1
position: 838925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:838271-838331:-1:exon

position:838271:-1
position: 838271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838331:-1
position: 838331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:837815-837921:-1:exon

position:837815:-1
position: 837815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837921:-1
position: 837921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:837628-837740:-1:exon

position:837628:-1
position: 837628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837740:-1
position: 837740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:837253-837365:-1:exon

position:837253:-1
position: 837253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837365:-1
position: 837365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:835770-835870:-1:exon

position:835770:-1
position: 835770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835870:-1
position: 835870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:829416-831266:-1:exon

position:831266:-1
position: 831266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MCF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: MCF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene DBL
translation: MPETAIPICAKDISDDLMKEFAFLSGEYKNILRVSVSPCAGCALGSAAGPPWQRGQGSILVFPAGGRGKDKAWIITLPDNARFNEVPEENVARVLTYLTSVPSQHESDTKFILILDRRLDTWTSVKTTLQKIAASFPGNLHLVMVLRPTGFFQRTFTDIGFRFSQEDFLLKLPVVMLSSVSDLLTYIDEQQLTPELGGTLEYCHSEWVIFRTAIESFALTVKEIAQMLQCFGTELAETELPEDMYSIERMLALRTERYCQLKEDITAVTKEGNLLLSSFEEPDSGECSQDQQQERPGDWETVNRLLGQLREMETAFDGFWEKHQLKMEQYLQLWKFEQSFQEVKNAIEFLMGQQAELPDTGDSIPQVKQRLKDLDHFDGMAQDLIGKAQVVILHGHQLAANHHYALNLICQQCNELRHHCDLLADDIKRKQMRLQKTLDLHTRLQQALQCCDEGAYLLANQQMDKCQSKEGAQKALQDIERFLESSSAYLNYDPQALHYDFESVLTSELKCQIQAVQVKLENVRSMFENRQSCFKKLLDKHVRPVQLVAPRPENPPRSKSPLFSPKHGVDFNSSLKFSFDLSLPGKKTSRKTPSSRKIEVMHDYQEKRNSLQYFISDSDDSLDILKGHVINELIETERVYVEELFTVLTGYRAEMDNPAMLMLLPPVLRNRKDVLFGNMPEIYDFHNKIFLHSLENCLGAPERVGCCFLDRREDFQMYEKYCQNKPRSESLWRQCSESAFFQECQRKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSTSCDGVQELQEALVAMLDLLKSVNDSMHQISITGYDGDLSELGKVLMQGSFSVWTGHRKGPTKMKDLARFKPMQRHLFLYEKALVFCKKREEHGDGYDKTSSYSFKHFLKMNAVGITENVKGDHRKFEIWYSGREEVYVVQAQTVDLKMAWLNEIRKILFKQQELIKVEKQQPGSCSELPLSSQLGDRKQQRASISSEENDSERTSPVMLDSGLVSPQNKPHRSWPGMSQSLEICEGLEEWSGHQYLSNCSDTEEEDGNQLSPGKYKALADCKRRGSEDLLVKNGDEIQLLHEDGEGQWLVKNLNRRKEGWIPVHSLQIVVGDCRFRNAKVADAALCNTRKFSSP
SIO_010081: MCF2
subclass of: SO_0000673
so part of: MCF2
location: complement(join(831226..831266,835770..835870,837253..837365,837628..837740,837815..837921,838271..838331,838847..838925,839214..839306,842763..842984,843733..843858,844788..844880,845202..845294,845609..845678,845791..845906,847598..847664,847886..847974,848532..848620,852032..852203,852347..852538,853803..853994,855097..855216,855577..855691,856154..856278,859403..859552,860204..860320,862039..862158,867920..868010,874432..874621,875092..875202,875724..875730))
location: region:831226-875730:-1
so has part: feature:875724-875730:-1:exon
so has part: feature:875092-875202:-1:exon
so has part: feature:874432-874621:-1:exon
so has part: feature:867920-868010:-1:exon
so has part: feature:862039-862158:-1:exon
so has part: feature:860204-860320:-1:exon
so has part: feature:859403-859552:-1:exon
so has part: feature:856154-856278:-1:exon
so has part: feature:855577-855691:-1:exon
so has part: feature:855097-855216:-1:exon
so has part: feature:853803-853994:-1:exon
so has part: feature:852347-852538:-1:exon
so has part: feature:852032-852203:-1:exon
so has part: feature:848532-848620:-1:exon
so has part: feature:847886-847974:-1:exon
so has part: feature:847598-847664:-1:exon
so has part: feature:845791-845906:-1:exon
so has part: feature:845609-845678:-1:exon
so has part: feature:845202-845294:-1:exon
so has part: feature:844788-844880:-1:exon
so has part: feature:843733-843858:-1:exon
so has part: feature:842763-842984:-1:exon
so has part: feature:839214-839306:-1:exon
so has part: feature:838847-838925:-1:exon
so has part: feature:838271-838331:-1:exon
so has part: feature:837815-837921:-1:exon
so has part: feature:837628-837740:-1:exon
so has part: feature:837253-837365:-1:exon
so has part: feature:835770-835870:-1:exon
so has part: feature:831226-831266:-1:exon

XP_033370033.1
type: Protein
SIO_000068: ncbiprotein

position:831226:-1
position: 831226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875724-875730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875092-875202:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:874432-874621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:867920-868010:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:862039-862158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:860204-860320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:859403-859552:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:856154-856278:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:855577-855691:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:855097-855216:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:853803-853994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:852347-852538:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:852032-852203:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:848532-848620:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:847886-847974:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:847598-847664:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:845791-845906:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:845609-845678:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:845202-845294:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:844788-844880:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:843733-843858:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:842763-842984:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:839214-839306:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:838847-838925:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:838271-838331:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:837815-837921:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:837628-837740:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:837253-837365:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:835770-835870:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:831226-831266:-1:exon

ATP11C
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(887744..940014)
location: region:887744-940014:-1
so has part: feature:887744-940014:-1:exon
subclass of: SO_0000010

107203922
type: Gene
SIO_000068: ncbigene

position:887744:-1
position: 887744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940014:-1
position: 940014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887744-940014:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015626552.1
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(887744..890874,894937..895090,896454..896557,897339..897404,899079..899214,901539..901666,902709..902768,903138..903283,903816..903918,904671..904845,905186..905449,906003..906184,906722..906825,907440..907513,908368..908439,909316..909473,909573..909734,910592..910789,911552..911702,912079..912160,912690..912754,913543..913593,914175..914278,916581..916709,917279..917386,918333..918413,921799..921888,923298..923417,939972..940014))
location: region:887744-940014:-1
so has part: feature:939972-940014:-1:exon
so has part: feature:923298-923417:-1:exon
so has part: feature:921799-921888:-1:exon
so has part: feature:918333-918413:-1:exon
so has part: feature:917279-917386:-1:exon
so has part: feature:916581-916709:-1:exon
so has part: feature:914175-914278:-1:exon
so has part: feature:913543-913593:-1:exon
so has part: feature:912690-912754:-1:exon
so has part: feature:912079-912160:-1:exon
so has part: feature:911552-911702:-1:exon
so has part: feature:910592-910789:-1:exon
so has part: feature:909573-909734:-1:exon
so has part: feature:909316-909473:-1:exon
so has part: feature:908368-908439:-1:exon
so has part: feature:907440-907513:-1:exon
so has part: feature:906722-906825:-1:exon
so has part: feature:906003-906184:-1:exon
so has part: feature:905186-905449:-1:exon
so has part: feature:904671-904845:-1:exon
so has part: feature:903816-903918:-1:exon
so has part: feature:903138-903283:-1:exon
so has part: feature:902709-902768:-1:exon
so has part: feature:901539-901666:-1:exon
so has part: feature:899079-899214:-1:exon
so has part: feature:897339-897404:-1:exon
so has part: feature:896454-896557:-1:exon
so has part: feature:894937-895090:-1:exon
so has part: feature:887744-890874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:939972-940014:-1:exon

position:939972:-1
position: 939972
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:923298-923417:-1:exon

position:923298:-1
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reference: sequence
type: ReverseStrandPosition
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position:923417:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:921799-921888:-1:exon

position:921799:-1
position: 921799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921888:-1
position: 921888
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:918333-918413:-1:exon

position:918333:-1
position: 918333
reference: sequence
type: ReverseStrandPosition
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position:918413:-1
position: 918413
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:917279-917386:-1:exon

position:917279:-1
position: 917279
reference: sequence
type: ReverseStrandPosition
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position:917386:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:916581-916709:-1:exon

position:916581:-1
position: 916581
reference: sequence
type: ReverseStrandPosition
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position:916709:-1
position: 916709
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:914175-914278:-1:exon

position:914175:-1
position: 914175
reference: sequence
type: ReverseStrandPosition
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position:914278:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:913543-913593:-1:exon

position:913543:-1
position: 913543
reference: sequence
type: ReverseStrandPosition
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position:913593:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:912690-912754:-1:exon

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reference: sequence
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position:912754:-1
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urn:…
SIO_000300: 10
SIO_000628: feature:912079-912160:-1:exon

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reference: sequence
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position:912160:-1
position: 912160
reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:911552-911702:-1:exon

position:911552:-1
position: 911552
reference: sequence
type: ReverseStrandPosition
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position:911702:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:910592-910789:-1:exon

position:910592:-1
position: 910592
reference: sequence
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position:910789:-1
position: 910789
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urn:…
SIO_000300: 13
SIO_000628: feature:909573-909734:-1:exon

position:909573:-1
position: 909573
reference: sequence
type: ReverseStrandPosition
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position:909734:-1
position: 909734
reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:909316-909473:-1:exon

position:909316:-1
position: 909316
reference: sequence
type: ReverseStrandPosition
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position:909473:-1
position: 909473
reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:908368-908439:-1:exon

position:908368:-1
position: 908368
reference: sequence
type: ReverseStrandPosition
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position:908439:-1
position: 908439
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:907440-907513:-1:exon

position:907440:-1
position: 907440
reference: sequence
type: ReverseStrandPosition
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position:907513:-1
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urn:…
SIO_000300: 17
SIO_000628: feature:906722-906825:-1:exon

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reference: sequence
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position:906825:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:906003-906184:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:906184:-1
position: 906184
reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:905186-905449:-1:exon

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reference: sequence
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position:905449:-1
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urn:…
SIO_000300: 20
SIO_000628: feature:904671-904845:-1:exon

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reference: sequence
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position:904845:-1
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urn:…
SIO_000300: 21
SIO_000628: feature:903816-903918:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:903918:-1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:903138-903283:-1:exon

position:903138:-1
position: 903138
reference: sequence
type: ReverseStrandPosition
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position:903283:-1
position: 903283
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:902709-902768:-1:exon

position:902709:-1
position: 902709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902768:-1
position: 902768
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:901539-901666:-1:exon

position:901539:-1
position: 901539
reference: sequence
type: ReverseStrandPosition
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position:901666:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:899079-899214:-1:exon

position:899079:-1
position: 899079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899214:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:897339-897404:-1:exon

position:897339:-1
position: 897339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897404:-1
position: 897404
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:896454-896557:-1:exon

position:896454:-1
position: 896454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896557:-1
position: 896557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:894937-895090:-1:exon

position:894937:-1
position: 894937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895090:-1
position: 895090
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 29
SIO_000628: feature:887744-890874:-1:exon

position:890874:-1
position: 890874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X3
translation: MLRRSLSRLCAGEEKRVGTRTVVVGHRPVSDTEACVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSHQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCLSEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNHKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQAGPFDLPVLVSYKRIENGYVKAEDAVTNLAERYPLRIP
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(890758..890874,894937..895090,896454..896557,897339..897404,899079..899214,901539..901666,902709..902768,903138..903283,903816..903918,904671..904845,905186..905449,906003..906184,906722..906825,907440..907513,908368..908439,909316..909473,909573..909734,910592..910789,911552..911702,912079..912160,912690..912754,913543..913593,914175..914278,916581..916709,917279..917386,918333..918413,921799..921888,923298..923417,939972..939998))
location: region:890758-939998:-1
so has part: feature:939972-939998:-1:exon
so has part: feature:923298-923417:-1:exon
so has part: feature:921799-921888:-1:exon
so has part: feature:918333-918413:-1:exon
so has part: feature:917279-917386:-1:exon
so has part: feature:916581-916709:-1:exon
so has part: feature:914175-914278:-1:exon
so has part: feature:913543-913593:-1:exon
so has part: feature:912690-912754:-1:exon
so has part: feature:912079-912160:-1:exon
so has part: feature:911552-911702:-1:exon
so has part: feature:910592-910789:-1:exon
so has part: feature:909573-909734:-1:exon
so has part: feature:909316-909473:-1:exon
so has part: feature:908368-908439:-1:exon
so has part: feature:907440-907513:-1:exon
so has part: feature:906722-906825:-1:exon
so has part: feature:906003-906184:-1:exon
so has part: feature:905186-905449:-1:exon
so has part: feature:904671-904845:-1:exon
so has part: feature:903816-903918:-1:exon
so has part: feature:903138-903283:-1:exon
so has part: feature:902709-902768:-1:exon
so has part: feature:901539-901666:-1:exon
so has part: feature:899079-899214:-1:exon
so has part: feature:897339-897404:-1:exon
so has part: feature:896454-896557:-1:exon
so has part: feature:894937-895090:-1:exon
so has part: feature:890758-890874:-1:exon

XP_015482038.1
type: Protein
SIO_000068: ncbiprotein

position:890758:-1
position: 890758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939998:-1
position: 939998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939972-939998:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923298-923417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921799-921888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918333-918413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917279-917386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916581-916709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914175-914278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913543-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912690-912754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912079-912160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911552-911702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910592-910789:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909573-909734:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909316-909473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908368-908439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907440-907513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906722-906825:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:906003-906184:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:905186-905449:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:904671-904845:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:903816-903918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903138-903283:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:902709-902768:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901539-901666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:899079-899214:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:897339-897404:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:896454-896557:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:894937-895090:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:890758-890874:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015626548.3
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(890775..890874,891996..892091,894937..895090,896454..896557,897339..897404,899079..899214,901539..901666,902709..902768,903138..903283,903816..903918,904671..904845,905186..905449,906003..906184,906722..906825,907440..907513,908368..908439,909316..909473,909573..909734,910592..910789,911552..911702,912079..912160,912690..912754,913543..913593,914175..914278,916581..916709,917279..917386,918333..918413,921799..921888,923298..923417,929050..929129))
location: region:890775-929129:-1
so has part: feature:929050-929129:-1:exon
so has part: feature:923298-923417:-1:exon
so has part: feature:921799-921888:-1:exon
so has part: feature:918333-918413:-1:exon
so has part: feature:917279-917386:-1:exon
so has part: feature:916581-916709:-1:exon
so has part: feature:914175-914278:-1:exon
so has part: feature:913543-913593:-1:exon
so has part: feature:912690-912754:-1:exon
so has part: feature:912079-912160:-1:exon
so has part: feature:911552-911702:-1:exon
so has part: feature:910592-910789:-1:exon
so has part: feature:909573-909734:-1:exon
so has part: feature:909316-909473:-1:exon
so has part: feature:908368-908439:-1:exon
so has part: feature:907440-907513:-1:exon
so has part: feature:906722-906825:-1:exon
so has part: feature:906003-906184:-1:exon
so has part: feature:905186-905449:-1:exon
so has part: feature:904671-904845:-1:exon
so has part: feature:903816-903918:-1:exon
so has part: feature:903138-903283:-1:exon
so has part: feature:902709-902768:-1:exon
so has part: feature:901539-901666:-1:exon
so has part: feature:899079-899214:-1:exon
so has part: feature:897339-897404:-1:exon
so has part: feature:896454-896557:-1:exon
so has part: feature:894937-895090:-1:exon
so has part: feature:891996-892091:-1:exon
so has part: feature:890775-890874:-1:exon

position:890775:-1
position: 890775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929129:-1
position: 929129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929050-929129:-1:exon

position:929050:-1
position: 929050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:923298-923417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921799-921888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918333-918413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917279-917386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916581-916709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914175-914278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913543-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912690-912754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912079-912160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911552-911702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910592-910789:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909573-909734:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909316-909473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908368-908439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907440-907513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906722-906825:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:906003-906184:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:905186-905449:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:904671-904845:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:903816-903918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903138-903283:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:902709-902768:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901539-901666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:899079-899214:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:897339-897404:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:896454-896557:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:894937-895090:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:891996-892091:-1:exon

position:891996:-1
position: 891996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892091:-1
position: 892091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:890775-890874:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015626549.3
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(890785..890874,892920..893010,894937..895090,896454..896557,897339..897404,899079..899214,901539..901666,902709..902768,903138..903283,903816..903918,904671..904845,905186..905449,906003..906184,906722..906825,907440..907513,908368..908439,909316..909473,909573..909734,910592..910789,911552..911702,912079..912160,912690..912754,913543..913593,914175..914278,916581..916709,917279..917386,918333..918413,921799..921888,923298..923417,929050..929130))
location: region:890785-929130:-1
so has part: feature:929050-929130:-1:exon
so has part: feature:923298-923417:-1:exon
so has part: feature:921799-921888:-1:exon
so has part: feature:918333-918413:-1:exon
so has part: feature:917279-917386:-1:exon
so has part: feature:916581-916709:-1:exon
so has part: feature:914175-914278:-1:exon
so has part: feature:913543-913593:-1:exon
so has part: feature:912690-912754:-1:exon
so has part: feature:912079-912160:-1:exon
so has part: feature:911552-911702:-1:exon
so has part: feature:910592-910789:-1:exon
so has part: feature:909573-909734:-1:exon
so has part: feature:909316-909473:-1:exon
so has part: feature:908368-908439:-1:exon
so has part: feature:907440-907513:-1:exon
so has part: feature:906722-906825:-1:exon
so has part: feature:906003-906184:-1:exon
so has part: feature:905186-905449:-1:exon
so has part: feature:904671-904845:-1:exon
so has part: feature:903816-903918:-1:exon
so has part: feature:903138-903283:-1:exon
so has part: feature:902709-902768:-1:exon
so has part: feature:901539-901666:-1:exon
so has part: feature:899079-899214:-1:exon
so has part: feature:897339-897404:-1:exon
so has part: feature:896454-896557:-1:exon
so has part: feature:894937-895090:-1:exon
so has part: feature:892920-893010:-1:exon
so has part: feature:890785-890874:-1:exon

position:890785:-1
position: 890785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929130:-1
position: 929130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929050-929130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923298-923417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921799-921888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918333-918413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917279-917386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916581-916709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914175-914278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913543-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912690-912754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912079-912160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911552-911702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910592-910789:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909573-909734:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909316-909473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908368-908439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907440-907513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906722-906825:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:906003-906184:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:905186-905449:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:904671-904845:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:903816-903918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903138-903283:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:902709-902768:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901539-901666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:899079-899214:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:897339-897404:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:896454-896557:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:894937-895090:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:892920-893010:-1:exon

position:892920:-1
position: 892920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893010:-1
position: 893010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:890785-890874:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X1
translation: MDGVLSLNQEICLNMWSVWCAGEEKRVGTRTVVVGHRPVSDTEACVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSHQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCLSEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNHKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQSSRKAPDSLSARPSVRPLLLRTFSDESNVL
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(891999..892091,894937..895090,896454..896557,897339..897404,899079..899214,901539..901666,902709..902768,903138..903283,903816..903918,904671..904845,905186..905449,906003..906184,906722..906825,907440..907513,908368..908439,909316..909473,909573..909734,910592..910789,911552..911702,912079..912160,912690..912754,913543..913593,914175..914278,916581..916709,917279..917386,918333..918413,921799..921888,923298..923417,929050..929106))
location: region:891999-929106:-1
so has part: feature:929050-929106:-1:exon
so has part: feature:923298-923417:-1:exon
so has part: feature:921799-921888:-1:exon
so has part: feature:918333-918413:-1:exon
so has part: feature:917279-917386:-1:exon
so has part: feature:916581-916709:-1:exon
so has part: feature:914175-914278:-1:exon
so has part: feature:913543-913593:-1:exon
so has part: feature:912690-912754:-1:exon
so has part: feature:912079-912160:-1:exon
so has part: feature:911552-911702:-1:exon
so has part: feature:910592-910789:-1:exon
so has part: feature:909573-909734:-1:exon
so has part: feature:909316-909473:-1:exon
so has part: feature:908368-908439:-1:exon
so has part: feature:907440-907513:-1:exon
so has part: feature:906722-906825:-1:exon
so has part: feature:906003-906184:-1:exon
so has part: feature:905186-905449:-1:exon
so has part: feature:904671-904845:-1:exon
so has part: feature:903816-903918:-1:exon
so has part: feature:903138-903283:-1:exon
so has part: feature:902709-902768:-1:exon
so has part: feature:901539-901666:-1:exon
so has part: feature:899079-899214:-1:exon
so has part: feature:897339-897404:-1:exon
so has part: feature:896454-896557:-1:exon
so has part: feature:894937-895090:-1:exon
so has part: feature:891999-892091:-1:exon

XP_015482034.1
type: Protein
SIO_000068: ncbiprotein

position:891999:-1
position: 891999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929106:-1
position: 929106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929050-929106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923298-923417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921799-921888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918333-918413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917279-917386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916581-916709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914175-914278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913543-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912690-912754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912079-912160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911552-911702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910592-910789:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909573-909734:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909316-909473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908368-908439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907440-907513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906722-906825:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:906003-906184:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:905186-905449:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:904671-904845:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:903816-903918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903138-903283:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:902709-902768:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901539-901666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:899079-899214:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:897339-897404:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:896454-896557:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:894937-895090:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:891999-892091:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_015626551.3
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(892006..892091,892920..893010,894937..895090,896454..896557,897339..897404,899079..899214,901539..901666,902709..902768,903138..903283,903816..903918,904671..904845,905186..905449,906003..906184,906722..906825,907440..907513,908368..908439,909316..909473,909573..909734,910592..910789,911552..911702,912079..912160,912690..912754,913543..913593,914175..914278,916581..916709,917279..917386,918333..918413,921799..921888,923298..923417,929050..929130))
location: region:892006-929130:-1
so has part: feature:929050-929130:-1:exon
so has part: feature:923298-923417:-1:exon
so has part: feature:921799-921888:-1:exon
so has part: feature:918333-918413:-1:exon
so has part: feature:917279-917386:-1:exon
so has part: feature:916581-916709:-1:exon
so has part: feature:914175-914278:-1:exon
so has part: feature:913543-913593:-1:exon
so has part: feature:912690-912754:-1:exon
so has part: feature:912079-912160:-1:exon
so has part: feature:911552-911702:-1:exon
so has part: feature:910592-910789:-1:exon
so has part: feature:909573-909734:-1:exon
so has part: feature:909316-909473:-1:exon
so has part: feature:908368-908439:-1:exon
so has part: feature:907440-907513:-1:exon
so has part: feature:906722-906825:-1:exon
so has part: feature:906003-906184:-1:exon
so has part: feature:905186-905449:-1:exon
so has part: feature:904671-904845:-1:exon
so has part: feature:903816-903918:-1:exon
so has part: feature:903138-903283:-1:exon
so has part: feature:902709-902768:-1:exon
so has part: feature:901539-901666:-1:exon
so has part: feature:899079-899214:-1:exon
so has part: feature:897339-897404:-1:exon
so has part: feature:896454-896557:-1:exon
so has part: feature:894937-895090:-1:exon
so has part: feature:892920-893010:-1:exon
so has part: feature:892006-892091:-1:exon

position:892006:-1
position: 892006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929050-929130:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923298-923417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921799-921888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918333-918413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917279-917386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916581-916709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914175-914278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913543-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912690-912754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912079-912160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911552-911702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910592-910789:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909573-909734:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909316-909473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908368-908439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907440-907513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906722-906825:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:906003-906184:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:905186-905449:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:904671-904845:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:903816-903918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903138-903283:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:902709-902768:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901539-901666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:899079-899214:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:897339-897404:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:896454-896557:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:894937-895090:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:892920-893010:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:892006-892091:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X2
translation: MDGVLSLNQEICLNMWSVWCAGEEKRVGTRTVVVGHRPVSDTEACVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSHQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCLSEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNHKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQVTKRLPSSGTSTIFMLSQTSSNHSFSWSE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(892921..893010,894937..895090,896454..896557,897339..897404,899079..899214,901539..901666,902709..902768,903138..903283,903816..903918,904671..904845,905186..905449,906003..906184,906722..906825,907440..907513,908368..908439,909316..909473,909573..909734,910592..910789,911552..911702,912079..912160,912690..912754,913543..913593,914175..914278,916581..916709,917279..917386,918333..918413,921799..921888,923298..923417,929050..929106))
location: region:892921-929106:-1
so has part: feature:929050-929106:-1:exon
so has part: feature:923298-923417:-1:exon
so has part: feature:921799-921888:-1:exon
so has part: feature:918333-918413:-1:exon
so has part: feature:917279-917386:-1:exon
so has part: feature:916581-916709:-1:exon
so has part: feature:914175-914278:-1:exon
so has part: feature:913543-913593:-1:exon
so has part: feature:912690-912754:-1:exon
so has part: feature:912079-912160:-1:exon
so has part: feature:911552-911702:-1:exon
so has part: feature:910592-910789:-1:exon
so has part: feature:909573-909734:-1:exon
so has part: feature:909316-909473:-1:exon
so has part: feature:908368-908439:-1:exon
so has part: feature:907440-907513:-1:exon
so has part: feature:906722-906825:-1:exon
so has part: feature:906003-906184:-1:exon
so has part: feature:905186-905449:-1:exon
so has part: feature:904671-904845:-1:exon
so has part: feature:903816-903918:-1:exon
so has part: feature:903138-903283:-1:exon
so has part: feature:902709-902768:-1:exon
so has part: feature:901539-901666:-1:exon
so has part: feature:899079-899214:-1:exon
so has part: feature:897339-897404:-1:exon
so has part: feature:896454-896557:-1:exon
so has part: feature:894937-895090:-1:exon
so has part: feature:892921-893010:-1:exon

XP_015482035.1
type: Protein
SIO_000068: ncbiprotein

position:892921:-1
position: 892921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929050-929106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923298-923417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921799-921888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918333-918413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917279-917386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916581-916709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914175-914278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913543-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912690-912754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912079-912160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911552-911702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910592-910789:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909573-909734:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909316-909473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908368-908439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907440-907513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906722-906825:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:906003-906184:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:905186-905449:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:904671-904845:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:903816-903918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903138-903283:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:902709-902768:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901539-901666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:899079-899214:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:897339-897404:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:896454-896557:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:894937-895090:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:892921-893010:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X2
translation: MDGVLSLNQEICLNMWSVWCAGEEKRVGTRTVVVGHRPVSDTEACVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSHQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCLSEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNHKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQPLYDAAYLTMYNICFTSLPILAYSLLEQHISIDTLTSDPQLYMKVSDNAMLQWRPFLYWTFLGAFEGLVFFFGVYFLFQNSSLEDNGKVFGNWTFGTIVFTVLVFTVTLKLALDTRFWTWMNHFVIWGSLAFYVFFSFFWGGVIWPFLKQQRMYFVFAHMLTSVSTWLAIILLIFISLFPEILLIVLKNIKEKNHQVTKRLPSSGTSTIFMLSQTSSNHSFSWSE
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(892921..893010,894937..895090,896454..896557,897339..897404,899079..899214,901539..901666,902709..902768,903138..903283,903816..903918,904671..904845,905186..905449,906003..906184,906722..906825,907440..907513,908368..908439,909316..909473,909573..909734,910592..910789,911552..911702,912079..912160,912690..912754,913543..913593,914175..914278,916581..916709,917279..917386,918333..918413,921799..921888,923298..923417,929050..929106))
location: region:892921-929106:-1
so has part: feature:929050-929106:-1:exon
so has part: feature:923298-923417:-1:exon
so has part: feature:921799-921888:-1:exon
so has part: feature:918333-918413:-1:exon
so has part: feature:917279-917386:-1:exon
so has part: feature:916581-916709:-1:exon
so has part: feature:914175-914278:-1:exon
so has part: feature:913543-913593:-1:exon
so has part: feature:912690-912754:-1:exon
so has part: feature:912079-912160:-1:exon
so has part: feature:911552-911702:-1:exon
so has part: feature:910592-910789:-1:exon
so has part: feature:909573-909734:-1:exon
so has part: feature:909316-909473:-1:exon
so has part: feature:908368-908439:-1:exon
so has part: feature:907440-907513:-1:exon
so has part: feature:906722-906825:-1:exon
so has part: feature:906003-906184:-1:exon
so has part: feature:905186-905449:-1:exon
so has part: feature:904671-904845:-1:exon
so has part: feature:903816-903918:-1:exon
so has part: feature:903138-903283:-1:exon
so has part: feature:902709-902768:-1:exon
so has part: feature:901539-901666:-1:exon
so has part: feature:899079-899214:-1:exon
so has part: feature:897339-897404:-1:exon
so has part: feature:896454-896557:-1:exon
so has part: feature:894937-895090:-1:exon
so has part: feature:892921-893010:-1:exon

XP_015482037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:929050-929106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923298-923417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921799-921888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918333-918413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917279-917386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916581-916709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914175-914278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913543-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912690-912754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912079-912160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911552-911702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910592-910789:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909573-909734:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909316-909473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908368-908439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907440-907513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906722-906825:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:906003-906184:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:905186-905449:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:904671-904845:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:903816-903918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903138-903283:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:902709-902768:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:901539-901666:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:899079-899214:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:897339-897404:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:896454-896557:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:894937-895090:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:892921-893010:-1:exon

ATP11C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ATP11C
product: ATPase phospholipid transporting 11C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015626553.3
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(899084..899214,902709..902768,903138..903283,903816..903918,904671..904845,905186..905449,906003..906184,906722..906825,907440..907513,908368..908439,909316..909473,909573..909734,910592..910789,911552..911702,912079..912160,912690..912754,913543..913593,914175..914278,916581..916709,917279..917386,918333..918413,921799..921888,923298..923417,929050..929132))
location: region:899084-929132:-1
so has part: feature:929050-929132:-1:exon
so has part: feature:923298-923417:-1:exon
so has part: feature:921799-921888:-1:exon
so has part: feature:918333-918413:-1:exon
so has part: feature:917279-917386:-1:exon
so has part: feature:916581-916709:-1:exon
so has part: feature:914175-914278:-1:exon
so has part: feature:913543-913593:-1:exon
so has part: feature:912690-912754:-1:exon
so has part: feature:912079-912160:-1:exon
so has part: feature:911552-911702:-1:exon
so has part: feature:910592-910789:-1:exon
so has part: feature:909573-909734:-1:exon
so has part: feature:909316-909473:-1:exon
so has part: feature:908368-908439:-1:exon
so has part: feature:907440-907513:-1:exon
so has part: feature:906722-906825:-1:exon
so has part: feature:906003-906184:-1:exon
so has part: feature:905186-905449:-1:exon
so has part: feature:904671-904845:-1:exon
so has part: feature:903816-903918:-1:exon
so has part: feature:903138-903283:-1:exon
so has part: feature:902709-902768:-1:exon
so has part: feature:899084-899214:-1:exon

position:899084:-1
position: 899084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:929132:-1
position: 929132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929050-929132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923298-923417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921799-921888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918333-918413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917279-917386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916581-916709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914175-914278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913543-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912690-912754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912079-912160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911552-911702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910592-910789:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909573-909734:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909316-909473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908368-908439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907440-907513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906722-906825:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:906003-906184:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:905186-905449:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:904671-904845:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:903816-903918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903138-903283:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:902709-902768:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:899084-899214:-1:exon

ATP11C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ATP11C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IG isoform X4
translation: MDGVLSLNQEICLNMWSVWCAGEEKRVGTRTVVVGHRPVSDTEACVAQKFCDNRIVSSKYTLWNFLPKNLFEQFRRIANFYFLIIFLVQVIVDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHRADNEVNKSNVFVVENAKQVRKESEKIKVGDIVEVKADETFPCDLIFLASSSTDGTCYVTTASLDGESNFKTHYAVRDTTVLCTDEAIDTLTATIECEQPQPDLYKFVGRIIIYRSHQEPVARSLGPENLLLKGATLKNTKKIYGVAVYTGMETKMALNYQGKSQKRSAVEKSINAFLIVYLCILLGKATVCTTLKYVWQSNPFNDEPWYNEKTKKERETFKVLRMFTDFLSFMVLFNFIIPVSMYVTVEMQKFLGSFFISWDKEMFDEEIQEGALVNTSDLNEELGQVEYVFTDKTGTLTENSMEFIECCIDGHKYKDCLSEVDGFSQTDGPLKYYGKAEKSREELFLRALCLCHTVQIKEADQVDGLMAHPERKYTYISSSPDEIALVKGAEKYGFTFLGLENNFMKIRNQKNETEMYQLLHVLNFDPVRRRMSVIVRTSTGKLLLFCKGADSSIFPRVQQEEIQQTKVHVDRNAMDGYRTLCVAFKELTEKEYDRIDRQLNEAKMALQDREEKMAKVFDDTEADMHLIGATAVEDRLQEQLAETIEALHAAGMKVWVLTGDKMETAKSTCYACRLFQTSTELLELTARTVGESERKEDRLHELLLEYHKKLIQDVPKNRGGLKRSWTLSQEYGLIIDGSTLSLILNPSQDSGSSNHKSIFLQICLKCTAVLCCRMAPLQKAQIVRMVKNTKGSPITLSIGDGANDVSMILEAHVGIGIKGKEGRQASRNSDYAVPKFKHLRKLLLAHGHLYYVRIAHLVQYFFYKNLCFILPQFLYQFFCGFSQQEGVG
SIO_010081: ATP11C
subclass of: SO_0000673
so part of: ATP11C
location: complement(join(899200..899214,902709..902768,903138..903283,903816..903918,904671..904845,905186..905449,906003..906184,906722..906825,907440..907513,908368..908439,909316..909473,909573..909734,910592..910789,911552..911702,912079..912160,912690..912754,913543..913593,914175..914278,916581..916709,917279..917386,918333..918413,921799..921888,923298..923417,929050..929106))
location: region:899200-929106:-1
so has part: feature:929050-929106:-1:exon
so has part: feature:923298-923417:-1:exon
so has part: feature:921799-921888:-1:exon
so has part: feature:918333-918413:-1:exon
so has part: feature:917279-917386:-1:exon
so has part: feature:916581-916709:-1:exon
so has part: feature:914175-914278:-1:exon
so has part: feature:913543-913593:-1:exon
so has part: feature:912690-912754:-1:exon
so has part: feature:912079-912160:-1:exon
so has part: feature:911552-911702:-1:exon
so has part: feature:910592-910789:-1:exon
so has part: feature:909573-909734:-1:exon
so has part: feature:909316-909473:-1:exon
so has part: feature:908368-908439:-1:exon
so has part: feature:907440-907513:-1:exon
so has part: feature:906722-906825:-1:exon
so has part: feature:906003-906184:-1:exon
so has part: feature:905186-905449:-1:exon
so has part: feature:904671-904845:-1:exon
so has part: feature:903816-903918:-1:exon
so has part: feature:903138-903283:-1:exon
so has part: feature:902709-902768:-1:exon
so has part: feature:899200-899214:-1:exon

XP_015482039.1
type: Protein
SIO_000068: ncbiprotein

position:899200:-1
position: 899200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929050-929106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:923298-923417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:921799-921888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918333-918413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917279-917386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:916581-916709:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914175-914278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:913543-913593:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912690-912754:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:912079-912160:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:911552-911702:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:910592-910789:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909573-909734:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909316-909473:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:908368-908439:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:907440-907513:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:906722-906825:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:906003-906184:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:905186-905449:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:904671-904845:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:903816-903918:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:903138-903283:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:902709-902768:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:899200-899214:-1:exon

LOC117244379
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC117244379
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(945072..949282)
location: region:945072-949282:-1
so has part: feature:945072-949282:-1:exon
subclass of: SO_0000011

117244379
type: Gene
SIO_000068: ncbigene

position:945072:-1
position: 945072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949282:-1
position: 949282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945072-949282:-1:exon

LOC117244379
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC117244379
product: uncharacterized LOC117244379
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004497328.1
SIO_010081: LOC117244379
subclass of: SO_0000673
so part of: LOC117244379
location: complement(join(945072..946806,946953..948190,948488..949122,949204..949282))
location: region:945072-949282:-1
so has part: feature:949204-949282:-1:exon
so has part: feature:948488-949122:-1:exon
so has part: feature:946953-948190:-1:exon
so has part: feature:945072-946806:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:949204-949282:-1:exon

position:949204:-1
position: 949204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:948488-949122:-1:exon

position:948488:-1
position: 948488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949122:-1
position: 949122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:946953-948190:-1:exon

position:946953:-1
position: 946953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948190:-1
position: 948190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:945072-946806:-1:exon

position:946806:-1
position: 946806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL13A
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<949944..952853)
location: region:949944-952853:-1
so has part: feature:949944-952853:-1:exon
subclass of: SO_0000010

107203671
type: Gene
SIO_000068: ncbigene

position:949944:-1
position: 949944
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:952853:-1
position: 952853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:949944-952853:-1:exon

ARL13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ARL13A
product: ADP ribosylation factor like GTPase 13A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_033514143.1
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(<949944..950052,950352..950601,950828..950898,951922..952853))
location: region:949944-952853:-1
so has part: feature:951922-952853:-1:exon
so has part: feature:950828-950898:-1:exon
so has part: feature:950352-950601:-1:exon
so has part: feature:949944-950052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:951922-952853:-1:exon

position:951922:-1
position: 951922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950828-950898:-1:exon

position:950828:-1
position: 950828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950898:-1
position: 950898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:950352-950601:-1:exon

position:950352:-1
position: 950352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950601:-1
position: 950601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:949944-950052:-1:exon

position:950052:-1
position: 950052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL13A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ARL13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13A
translation: MFHLFSHCWSWLQAIQEPIRKVTLLVMGLDNSGKTSVIVDIERVLAGEALPDAQPGQSRLRVDRFEVTLLELPGAQRSRSAWRSHYSEAHGLLFVLDSGDLARMEEARKVLSRVLSHPDVSGKPLLLLANKQDSAAALLPCELIERLCLERLVNENRSPCRIV
SIO_010081: ARL13A
subclass of: SO_0000673
so part of: ARL13A
location: complement(join(<949944..950052,950352..950601,950828..950898,951922..951980))
location: region:949944-951980:-1
so has part: feature:951922-951980:-1:exon
so has part: feature:950828-950898:-1:exon
so has part: feature:950352-950601:-1:exon
so has part: feature:949944-950052:-1:exon

XP_033370034.1
type: Protein
SIO_000068: ncbiprotein

position:951980:-1
position: 951980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:951922-951980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:950828-950898:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:950352-950601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:949944-950052:-1:exon

XKRX
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: XKRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 960797..965929
location: region:960797-965929:1
so has part: feature:960797-965929:1:exon
subclass of: SO_0000010

107203680
type: Gene
SIO_000068: ncbigene

position:960797:1
position: 960797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965929:1
position: 965929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960797-965929:1:exon

XKRX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: XKRX
product: XK related X-linked
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_015625992.2
SIO_010081: XKRX
subclass of: SO_0000673
so part of: XKRX
location: join(960797..961003,962914..963173,964626..965929)
location: region:960797-965929:1
so has part: feature:960797-961003:1:exon
so has part: feature:962914-963173:1:exon
so has part: feature:964626-965929:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:960797-961003:1:exon

position:961003:1
position: 961003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:962914-963173:1:exon

position:962914:1
position: 962914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963173:1
position: 963173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:964626-965929:1:exon

position:964626:1
position: 964626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XKRX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: XKRX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 2
translation: MHLLQLGPIIRCVEALLVYCWSGREEEPYVTITRKRRLQKGYEVEMEQEVGHSERRLATHRNAFKRMAVIQAFLGSTPQLTLQLYISVLEKYVPVARAVLMAICLVSVTYGALVCNVLAIQVKYDDYKVQLRPLAFLCIVLWRSLEISTRIAVLVLFSTVFKHWIIPIALANLLVVFFLPWVQFWRSGSRLPDNIEKNFSRLGTVVVLCAFTLLYSSINMFCWSAVQLKLADRDLIDKSQNWGRLAVYYVARLVENTALVILWYFFKTDVYENVCTALLVLQLLLGYCLGIYFMLLFFQYLHPCRQLFRHNVADFLHCVCCRRHTAGTPLCLEAPFEPGVRHSIV
SIO_010081: XKRX
subclass of: SO_0000673
so part of: XKRX
location: join(960972..961003,962914..963173,964626..965371)
location: region:960972-965371:1
so has part: feature:960972-961003:1:exon
so has part: feature:962914-963173:1:exon
so has part: feature:964626-965371:1:exon

XP_015481478.2
type: Protein
SIO_000068: ncbiprotein

position:960972:1
position: 960972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965371:1
position: 965371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960972-961003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962914-963173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964626-965371:1:exon

NOX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: NOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 966054..971655
location: region:966054-971655:1
so has part: feature:966054-971655:1:exon
subclass of: SO_0000010

107204023
type: Gene
SIO_000068: ncbigene

position:966054:1
position: 966054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971655:1
position: 971655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966054-971655:1:exon

NOX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: NOX1
product: NADPH oxidase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015626783.3
SIO_010081: NOX1
subclass of: SO_0000673
so part of: NOX1
location: join(966054..967063,968059..968154,968508..968618,968705..968789,968866..969008,969085..969266,969451..969589,969691..969783,969939..970165,970244..970406,970489..970635,970839..970963,971133..971655)
location: region:966054-971655:1
so has part: feature:966054-967063:1:exon
so has part: feature:968059-968154:1:exon
so has part: feature:968508-968618:1:exon
so has part: feature:968705-968789:1:exon
so has part: feature:968866-969008:1:exon
so has part: feature:969085-969266:1:exon
so has part: feature:969451-969589:1:exon
so has part: feature:969691-969783:1:exon
so has part: feature:969939-970165:1:exon
so has part: feature:970244-970406:1:exon
so has part: feature:970489-970635:1:exon
so has part: feature:970839-970963:1:exon
so has part: feature:971133-971655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:966054-967063:1:exon

position:967063:1
position: 967063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:968059-968154:1:exon

position:968059:1
position: 968059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968154:1
position: 968154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:968508-968618:1:exon

position:968508:1
position: 968508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968618:1
position: 968618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:968705-968789:1:exon

position:968705:1
position: 968705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968789:1
position: 968789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:968866-969008:1:exon

position:968866:1
position: 968866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969008:1
position: 969008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:969085-969266:1:exon

position:969085:1
position: 969085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969266:1
position: 969266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:969451-969589:1:exon

position:969451:1
position: 969451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969589:1
position: 969589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:969691-969783:1:exon

position:969691:1
position: 969691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:969783:1
position: 969783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:969939-970165:1:exon

position:969939:1
position: 969939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970165:1
position: 970165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:970244-970406:1:exon

position:970244:1
position: 970244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970406:1
position: 970406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:970489-970635:1:exon

position:970489:1
position: 970489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970635:1
position: 970635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:970839-970963:1:exon

position:970839:1
position: 970839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970963:1
position: 970963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:971133-971655:1:exon

position:971133:1
position: 971133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: NOX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADPH oxidase 1
translation: MGNWLVNHWFSAAVLAAWLGINIFLFTYYFLFFDRDEQYFYTRAILGSALAWARASAKCLNFNSMLILLPVCRNLLSFLRGTCSCCRRTLRKQLDHNLTFHKLVAYTLALLTAVHTIAHLFNLERYNQSQQATDGSLPAVLSKMHLQGSKWLNPIHSNQTTVEYVAFTTIPGLTGVIITLALILMVTSSTEFIRRNYFELFWYTHHLFLIYFAGLVIHGIAGLVRGQTEQSMAEVHPYQCSEYLALRDQNCTHNCCKDPEFGSIPAESWKWVLAPIILYVFERILRVWRAQQKVVVTKVVMHPARVLELQMQKKGFCMEVGQYIFVNCPSISPLEWHPFTLTSAPEEDFFSIHIRVAGDWTERLIDTFQLEIPRIEVDGPFGTASEDVFQYEVAMLVGAGIGVTPFASILKSIWYKFQQADQTLKTKKIYFYWLCRDTGAFAWFNDLLASLEQKMAESGKADFLTYRLFLTGWDTSIANNVALHFDTATDTVTGLRHKTIFGRPMWNMEFAAVAAAHPRSVVGVFLCGPEALAKSLQKSCHQHSSLDPRKVKFYFNKENF
SIO_010081: NOX1
subclass of: SO_0000673
so part of: NOX1
location: join(967019..967063,968059..968154,968508..968618,968705..968789,968866..969008,969085..969266,969451..969589,969691..969783,969939..970165,970244..970406,970489..970635,970839..970963,971133..971259)
location: region:967019-971259:1
so has part: feature:967019-967063:1:exon
so has part: feature:968059-968154:1:exon
so has part: feature:968508-968618:1:exon
so has part: feature:968705-968789:1:exon
so has part: feature:968866-969008:1:exon
so has part: feature:969085-969266:1:exon
so has part: feature:969451-969589:1:exon
so has part: feature:969691-969783:1:exon
so has part: feature:969939-970165:1:exon
so has part: feature:970244-970406:1:exon
so has part: feature:970489-970635:1:exon
so has part: feature:970839-970963:1:exon
so has part: feature:971133-971259:1:exon

XP_015482269.1
type: Protein
SIO_000068: ncbiprotein

position:967019:1
position: 967019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971259:1
position: 971259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967019-967063:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:968059-968154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:968508-968618:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968705-968789:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968866-969008:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:969085-969266:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:969451-969589:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:969691-969783:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:969939-970165:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:970244-970406:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:970489-970635:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:970839-970963:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:971133-971259:1:exon

CSTF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(972111..978894)
location: region:972111-978894:-1
so has part: feature:972111-978894:-1:exon
subclass of: SO_0000010

107204034
type: Gene
SIO_000068: ncbigene

position:972111:-1
position: 972111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978894:-1
position: 978894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972111-978894:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_015626807.3
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(972111..972305,972425..972550,972693..972803,973163..973425,976497..976620,976727..976882,976976..977095,977188..977324,977806..977975,978570..978648,978767..978894))
location: region:972111-978894:-1
so has part: feature:978767-978894:-1:exon
so has part: feature:978570-978648:-1:exon
so has part: feature:977806-977975:-1:exon
so has part: feature:977188-977324:-1:exon
so has part: feature:976976-977095:-1:exon
so has part: feature:976727-976882:-1:exon
so has part: feature:976497-976620:-1:exon
so has part: feature:973163-973425:-1:exon
so has part: feature:972693-972803:-1:exon
so has part: feature:972425-972550:-1:exon
so has part: feature:972111-972305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:978767-978894:-1:exon

position:978767:-1
position: 978767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:978570-978648:-1:exon

position:978570:-1
position: 978570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978648:-1
position: 978648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:977806-977975:-1:exon

position:977806:-1
position: 977806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977975:-1
position: 977975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:977188-977324:-1:exon

position:977188:-1
position: 977188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977324:-1
position: 977324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:976976-977095:-1:exon

position:976976:-1
position: 976976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977095:-1
position: 977095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:976727-976882:-1:exon

position:976727:-1
position: 976727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976882:-1
position: 976882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:976497-976620:-1:exon

position:976497:-1
position: 976497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976620:-1
position: 976620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:973163-973425:-1:exon

position:973163:-1
position: 973163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973425:-1
position: 973425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:972693-972803:-1:exon

position:972693:-1
position: 972693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972803:-1
position: 972803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:972425-972550:-1:exon

position:972425:-1
position: 972425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972550:-1
position: 972550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:972111-972305:-1:exon

position:972305:-1
position: 972305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_015626805.3
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(972111..972305,972425..972550,972693..972803,973163..973425,976126..976188,976497..976620,976727..976882,976976..977095,977188..977324,977806..977975,978570..978648,978767..978894))
location: region:972111-978894:-1
so has part: feature:978767-978894:-1:exon
so has part: feature:978570-978648:-1:exon
so has part: feature:977806-977975:-1:exon
so has part: feature:977188-977324:-1:exon
so has part: feature:976976-977095:-1:exon
so has part: feature:976727-976882:-1:exon
so has part: feature:976497-976620:-1:exon
so has part: feature:976126-976188:-1:exon
so has part: feature:973163-973425:-1:exon
so has part: feature:972693-972803:-1:exon
so has part: feature:972425-972550:-1:exon
so has part: feature:972111-972305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:978767-978894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978570-978648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977806-977975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977188-977324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976976-977095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976727-976882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976497-976620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976126-976188:-1:exon

position:976126:-1
position: 976126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976188:-1
position: 976188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:973163-973425:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:972693-972803:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:972425-972550:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:972111-972305:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_015626804.3
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(972111..972305,972425..972550,972693..972803,973163..973425,973722..973873,974238..974379,976126..976188,976497..976620,976727..976882,976976..977095,977188..977324,977806..977975,978570..978648,978767..978894))
location: region:972111-978894:-1
so has part: feature:978767-978894:-1:exon
so has part: feature:978570-978648:-1:exon
so has part: feature:977806-977975:-1:exon
so has part: feature:977188-977324:-1:exon
so has part: feature:976976-977095:-1:exon
so has part: feature:976727-976882:-1:exon
so has part: feature:976497-976620:-1:exon
so has part: feature:976126-976188:-1:exon
so has part: feature:974238-974379:-1:exon
so has part: feature:973722-973873:-1:exon
so has part: feature:973163-973425:-1:exon
so has part: feature:972693-972803:-1:exon
so has part: feature:972425-972550:-1:exon
so has part: feature:972111-972305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:978767-978894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978570-978648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977806-977975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977188-977324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976976-977095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976727-976882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976497-976620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976126-976188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:974238-974379:-1:exon

position:974238:-1
position: 974238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974379:-1
position: 974379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:973722-973873:-1:exon

position:973722:-1
position: 973722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973873:-1
position: 973873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:973163-973425:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:972693-972803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:972425-972550:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:972111-972305:-1:exon

CSTF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CSTF2
product: cleavage stimulation factor subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_015626803.3
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(972111..972305,972425..972550,972693..972803,973163..973425,973722..973873,974238..974379,974974..975033,976126..976188,976497..976620,976727..976882,976976..977095,977188..977324,977806..977975,978570..978648,978767..978894))
location: region:972111-978894:-1
so has part: feature:978767-978894:-1:exon
so has part: feature:978570-978648:-1:exon
so has part: feature:977806-977975:-1:exon
so has part: feature:977188-977324:-1:exon
so has part: feature:976976-977095:-1:exon
so has part: feature:976727-976882:-1:exon
so has part: feature:976497-976620:-1:exon
so has part: feature:976126-976188:-1:exon
so has part: feature:974974-975033:-1:exon
so has part: feature:974238-974379:-1:exon
so has part: feature:973722-973873:-1:exon
so has part: feature:973163-973425:-1:exon
so has part: feature:972693-972803:-1:exon
so has part: feature:972425-972550:-1:exon
so has part: feature:972111-972305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:978767-978894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978570-978648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977806-977975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977188-977324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976976-977095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976727-976882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976497-976620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976126-976188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:974974-975033:-1:exon

position:974974:-1
position: 974974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:975033:-1
position: 975033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:974238-974379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:973722-973873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:973163-973425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:972693-972803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:972425-972550:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:972111-972305:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X4
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQPVAGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGVGRDPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(972428..972550,972693..972803,973163..973425,976497..976620,976727..976882,976976..977095,977188..977324,977806..977975,978570..978648,978767..978824))
location: region:972428-978824:-1
so has part: feature:978767-978824:-1:exon
so has part: feature:978570-978648:-1:exon
so has part: feature:977806-977975:-1:exon
so has part: feature:977188-977324:-1:exon
so has part: feature:976976-977095:-1:exon
so has part: feature:976727-976882:-1:exon
so has part: feature:976497-976620:-1:exon
so has part: feature:973163-973425:-1:exon
so has part: feature:972693-972803:-1:exon
so has part: feature:972428-972550:-1:exon

XP_015482293.1
type: Protein
SIO_000068: ncbiprotein

position:972428:-1
position: 972428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978824:-1
position: 978824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978767-978824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978570-978648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977806-977975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977188-977324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976976-977095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976727-976882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976497-976620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:973163-973425:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:972693-972803:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:972428-972550:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X3
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQPVAGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLERGQVGRDPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(972428..972550,972693..972803,973163..973425,976126..976188,976497..976620,976727..976882,976976..977095,977188..977324,977806..977975,978570..978648,978767..978824))
location: region:972428-978824:-1
so has part: feature:978767-978824:-1:exon
so has part: feature:978570-978648:-1:exon
so has part: feature:977806-977975:-1:exon
so has part: feature:977188-977324:-1:exon
so has part: feature:976976-977095:-1:exon
so has part: feature:976727-976882:-1:exon
so has part: feature:976497-976620:-1:exon
so has part: feature:976126-976188:-1:exon
so has part: feature:973163-973425:-1:exon
so has part: feature:972693-972803:-1:exon
so has part: feature:972428-972550:-1:exon

XP_015482291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:978767-978824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978570-978648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977806-977975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977188-977324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976976-977095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976727-976882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976497-976620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976126-976188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:973163-973425:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:972693-972803:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:972428-972550:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X2
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQPVAGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLERGQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(972428..972550,972693..972803,973163..973425,973722..973873,974238..974379,976126..976188,976497..976620,976727..976882,976976..977095,977188..977324,977806..977975,978570..978648,978767..978824))
location: region:972428-978824:-1
so has part: feature:978767-978824:-1:exon
so has part: feature:978570-978648:-1:exon
so has part: feature:977806-977975:-1:exon
so has part: feature:977188-977324:-1:exon
so has part: feature:976976-977095:-1:exon
so has part: feature:976727-976882:-1:exon
so has part: feature:976497-976620:-1:exon
so has part: feature:976126-976188:-1:exon
so has part: feature:974238-974379:-1:exon
so has part: feature:973722-973873:-1:exon
so has part: feature:973163-973425:-1:exon
so has part: feature:972693-972803:-1:exon
so has part: feature:972428-972550:-1:exon

XP_015482290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:978767-978824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978570-978648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977806-977975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977188-977324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976976-977095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976727-976882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976497-976620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976126-976188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:974238-974379:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:973722-973873:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:973163-973425:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:972693-972803:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:972428-972550:-1:exon

CSTF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CSTF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cleavage stimulation factor subunit 2 isoform X1
translation: MAGLSVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPIIESPYGDPVNPEDAPESISRAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTSVPPLIPGNQQPVAGPGPGPGPGPGPGPNAQLNPQNTPSSQPQPIGGMHVNGAPPLMQPPMQGGVPAPGQMAAPVQGPGPGPMAPGGGMQPQVGMPGAGPVPLERGQGNLQLSPVGPARPASIERVQVPMPDPRAPMQRGPLPASGPPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGAPMHHMPGHDSRGPPHEMRGGPMGEPRPLMGEPRGPLMDARVGRDPRGLEPRGLEPRVMEARALEARGLEPRVLEPRVLEARAMEARVLEPRGLEPRGPGPNPRGPMPGGIQGPGPLNMGASGPQGPRQVPNMAGAGIPGAGVQGAGQPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
SIO_010081: CSTF2
subclass of: SO_0000673
so part of: CSTF2
location: complement(join(972428..972550,972693..972803,973163..973425,973722..973873,974238..974379,974974..975033,976126..976188,976497..976620,976727..976882,976976..977095,977188..977324,977806..977975,978570..978648,978767..978824))
location: region:972428-978824:-1
so has part: feature:978767-978824:-1:exon
so has part: feature:978570-978648:-1:exon
so has part: feature:977806-977975:-1:exon
so has part: feature:977188-977324:-1:exon
so has part: feature:976976-977095:-1:exon
so has part: feature:976727-976882:-1:exon
so has part: feature:976497-976620:-1:exon
so has part: feature:976126-976188:-1:exon
so has part: feature:974974-975033:-1:exon
so has part: feature:974238-974379:-1:exon
so has part: feature:973722-973873:-1:exon
so has part: feature:973163-973425:-1:exon
so has part: feature:972693-972803:-1:exon
so has part: feature:972428-972550:-1:exon

XP_015482289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:978767-978824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:978570-978648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977806-977975:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977188-977324:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976976-977095:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976727-976882:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976497-976620:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976126-976188:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:974974-975033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:974238-974379:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:973722-973873:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:973163-973425:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:972693-972803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:972428-972550:-1:exon

TRMT12
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 979061..981710
location: region:979061-981710:1
so has part: feature:979061-981710:1:exon
subclass of: SO_0000010

107204035
type: Gene
SIO_000068: ncbigene

position:979061:1
position: 979061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981710:1
position: 981710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979061-981710:1:exon

TRMT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TRMT12
product: tRNA methyltransferase 12 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019006557.2
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(979061..979269,979389..979536,979613..979802,979903..980232,980546..980703,980772..981710)
location: region:979061-981710:1
so has part: feature:979061-979269:1:exon
so has part: feature:979389-979536:1:exon
so has part: feature:979613-979802:1:exon
so has part: feature:979903-980232:1:exon
so has part: feature:980546-980703:1:exon
so has part: feature:980772-981710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979061-979269:1:exon

position:979269:1
position: 979269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:979389-979536:1:exon

position:979389:1
position: 979389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979536:1
position: 979536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:979613-979802:1:exon

position:979613:1
position: 979613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979802:1
position: 979802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:979903-980232:1:exon

position:979903:1
position: 979903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980232:1
position: 980232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:980546-980703:1:exon

position:980546:1
position: 980546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980703:1
position: 980703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:980772-981710:1:exon

position:980772:1
position: 980772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRMT12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TRMT12
product: tRNA methyltransferase 12 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_015626808.2
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(979061..979269,979389..979536,979613..979802,979903..980053,980123..980232,980546..980703,980772..981710)
location: region:979061-981710:1
so has part: feature:979061-979269:1:exon
so has part: feature:979389-979536:1:exon
so has part: feature:979613-979802:1:exon
so has part: feature:979903-980053:1:exon
so has part: feature:980123-980232:1:exon
so has part: feature:980546-980703:1:exon
so has part: feature:980772-981710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979061-979269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:979389-979536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979613-979802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979903-980053:1:exon

position:980053:1
position: 980053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:980123-980232:1:exon

position:980123:1
position: 980123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:980546-980703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:980772-981710:1:exon

TRMT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA wybutosine-synthesizing protein 2 homolog isoform X1
translation: MEATDVPMPVPMGVPALATERRFAQRLRECLEEERLLDGRFQLQRVPGGRVALPVLEEKLSQLCLPPEMPWELLRIQEPVPSRAARRCPPARRLRDQLRRLLGTGWSEELERDVPHAWQRHGDLVLLSEDSFKAAPWERLGPELWETVASALGARRVARRGRVMADGMRTPRVTLLLGQHGWVEHVDNGIRWAGAAGCGCCGEGTALTGVGSSRYTFDVTKCMFSPGNITEKLRVASLPCSGEVLVDLYAGIGYFTLPFLVHAGAAFVHACEWNSHAVEALHRTLVLNGVRDRCHIHAGDSRQLQLRDVADRVNLGLIPSSEEGWPVACRVLKKNTGGVLHIHHNVETPRAPAPPQPTVLLAERSSPETASSGGEAQQPTEDGGEETLGARLRPEWQRWAEATATRIQGLLAELHGRPWCTSVLHVEAVKSYAPHVHHLVLDLECRPVLPD
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(979187..979269,979389..979536,979613..979802,979903..980232,980546..980703,980772..981218)
location: region:979187-981218:1
so has part: feature:979187-979269:1:exon
so has part: feature:979389-979536:1:exon
so has part: feature:979613-979802:1:exon
so has part: feature:979903-980232:1:exon
so has part: feature:980546-980703:1:exon
so has part: feature:980772-981218:1:exon

XP_018862102.1
type: Protein
SIO_000068: ncbiprotein

position:979187:1
position: 979187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981218:1
position: 981218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979187-979269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:979389-979536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979613-979802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979903-980232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980546-980703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980772-981218:1:exon

TRMT12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TRMT12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA wybutosine-synthesizing protein 2 homolog isoform X2
translation: MEATDVPMPVPMGVPALATERRFAQRLRECLEEERLLDGRFQLQRVPGGRVALPVLEEKLSQLCLPPEMPWELLRIQEPVPSRAARRCPPARRLRDQLRRLLGTGWSEELERDVPHAWQRHGDLVLLSEDSFKAAPWERLGPELWETVASALGARRVARRGRVMADGMRTPRVTLLLGQHGWVEHVDNGIRYTFDVTKCMFSPGNITEKLRVASLPCSGEVLVDLYAGIGYFTLPFLVHAGAAFVHACEWNSHAVEALHRTLVLNGVRDRCHIHAGDSRQLQLRDVADRVNLGLIPSSEEGWPVACRVLKKNTGGVLHIHHNVETPRAPAPPQPTVLLAERSSPETASSGGEAQQPTEDGGEETLGARLRPEWQRWAEATATRIQGLLAELHGRPWCTSVLHVEAVKSYAPHVHHLVLDLECRPVLPD
SIO_010081: TRMT12
subclass of: SO_0000673
so part of: TRMT12
location: join(979187..979269,979389..979536,979613..979802,979903..980053,980123..980232,980546..980703,980772..981218)
location: region:979187-981218:1
so has part: feature:979187-979269:1:exon
so has part: feature:979389-979536:1:exon
so has part: feature:979613-979802:1:exon
so has part: feature:979903-980053:1:exon
so has part: feature:980123-980232:1:exon
so has part: feature:980546-980703:1:exon
so has part: feature:980772-981218:1:exon

XP_015482294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:979187-979269:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:979389-979536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979613-979802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:979903-980053:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980123-980232:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980546-980703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:980772-981218:1:exon

SYTL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 982447..989094
location: region:982447-989094:1
so has part: feature:982447-989094:1:exon
subclass of: SO_0000010

107203649
type: Gene
SIO_000068: ncbigene

position:982447:1
position: 982447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989094:1
position: 989094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982447-989094:1:exon

SYTL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SYTL4
product: synaptotagmin like 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015625940.2
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(982447..982516,983200..983347,983468..983683,984194..984303,984453..984567,984728..984835,985090..985204,985312..985396,985570..985673,985783..985869,986190..986368,986555..986657,987475..987636,988063..988168,988284..988383,988598..988806,988913..989094)
location: region:982447-989094:1
so has part: feature:982447-982516:1:exon
so has part: feature:983200-983347:1:exon
so has part: feature:983468-983683:1:exon
so has part: feature:984194-984303:1:exon
so has part: feature:984453-984567:1:exon
so has part: feature:984728-984835:1:exon
so has part: feature:985090-985204:1:exon
so has part: feature:985312-985396:1:exon
so has part: feature:985570-985673:1:exon
so has part: feature:985783-985869:1:exon
so has part: feature:986190-986368:1:exon
so has part: feature:986555-986657:1:exon
so has part: feature:987475-987636:1:exon
so has part: feature:988063-988168:1:exon
so has part: feature:988284-988383:1:exon
so has part: feature:988598-988806:1:exon
so has part: feature:988913-989094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982447-982516:1:exon

position:982516:1
position: 982516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:983200-983347:1:exon

position:983200:1
position: 983200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983347:1
position: 983347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983468-983683:1:exon

position:983468:1
position: 983468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983683:1
position: 983683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:984194-984303:1:exon

position:984194:1
position: 984194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984303:1
position: 984303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:984453-984567:1:exon

position:984453:1
position: 984453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984567:1
position: 984567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:984728-984835:1:exon

position:984728:1
position: 984728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984835:1
position: 984835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:985090-985204:1:exon

position:985090:1
position: 985090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985204:1
position: 985204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:985312-985396:1:exon

position:985312:1
position: 985312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985396:1
position: 985396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:985570-985673:1:exon

position:985570:1
position: 985570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985673:1
position: 985673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:985783-985869:1:exon

position:985783:1
position: 985783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985869:1
position: 985869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:986190-986368:1:exon

position:986190:1
position: 986190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986368:1
position: 986368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:986555-986657:1:exon

position:986555:1
position: 986555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986657:1
position: 986657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:987475-987636:1:exon

position:987475:1
position: 987475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987636:1
position: 987636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:988063-988168:1:exon

position:988063:1
position: 988063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988168:1
position: 988168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:988284-988383:1:exon

position:988284:1
position: 988284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988383:1
position: 988383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:988598-988806:1:exon

position:988598:1
position: 988598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988806:1
position: 988806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:988913-989094:1:exon

position:988913:1
position: 988913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYTL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SYTL4
product: synaptotagmin like 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_015625943.3
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(983079..983347,983468..983683,984194..984303,984453..984567,984728..984835,985090..985204,985312..985396,985570..985673,985783..985869,986190..986368,986555..986657,987475..987636,988063..988168,988284..988383,988598..988806,988913..989094)
location: region:983079-989094:1
so has part: feature:983079-983347:1:exon
so has part: feature:983468-983683:1:exon
so has part: feature:984194-984303:1:exon
so has part: feature:984453-984567:1:exon
so has part: feature:984728-984835:1:exon
so has part: feature:985090-985204:1:exon
so has part: feature:985312-985396:1:exon
so has part: feature:985570-985673:1:exon
so has part: feature:985783-985869:1:exon
so has part: feature:986190-986368:1:exon
so has part: feature:986555-986657:1:exon
so has part: feature:987475-987636:1:exon
so has part: feature:988063-988168:1:exon
so has part: feature:988284-988383:1:exon
so has part: feature:988598-988806:1:exon
so has part: feature:988913-989094:1:exon

position:983079:1
position: 983079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983079-983347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983468-983683:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:984194-984303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:984453-984567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:984728-984835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:985090-985204:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:985312-985396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:985570-985673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985783-985869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986190-986368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986555-986657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987475-987636:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988063-988168:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988284-988383:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988598-988806:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988913-989094:1:exon

SYTL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 4
translation: MSEAVDLSFLSDAERDLILQVLQRDEELRKAEERRIRRLKNELLEIRRKGAKRGSQRYSERTCARCQQSLGRVSPKANTCRGCNHLVCRDCRSCSPSGSWRCKVCTKEAELKKTTGDWFYDQRVNRFANHLGSDMVRLSLRHRPAASKRETVGQTLLQKAQLSEPKSSSAVRQPSPPAPREGSSLFPDASDPRDGKSDTESMENMSLDSYRPSPADVGGRRNSPERAVPGKQVVVPAGPASSSLTLPLRSKNAFSDGRDATVGTRSSTCEHETLFKKNPRRVVRPADYTKSVIDLRPEDLVGEGGSLGDRSKSVPGLNTELEEEEEDIDNLVEIHRQRVARGSMRSGTSSSTLGSMVSIYSEAGDFGSVAVTGGISFSLSYEQKTQTLFIHVKECRQLAYGDEGRKRSNPYVKTYLLPDKSRQGKRKTTIKRNTINPLYNELLKYEISKSLLLARTLQFSVWHHDRFGRNTFLGEVEVPLDAWNFESHLEEFLPLHGKAGADAAGLHQYKGELVVSMKYIPSAKHPGAGNGRKGKTGEGGELQVWIKEAKNLTAAKSGGTSDSFVKGYLLPHKNKASKRKTPVVKKTLNPHYNHTFVYNGVNPEDLQHICLELTVWDREPLSSNDFLGGVRLGVGNGMSNGQAVDWMDSTGEELNLWQKMCQYPGSWAEGTLQLRSTMAKLRL
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(983238..983347,983468..983683,984194..984303,984453..984567,984728..984835,985090..985204,985312..985396,985570..985673,985783..985869,986190..986368,986555..986657,987475..987636,988063..988168,988284..988383,988598..988806,988913..989055)
location: region:983238-989055:1
so has part: feature:983238-983347:1:exon
so has part: feature:983468-983683:1:exon
so has part: feature:984194-984303:1:exon
so has part: feature:984453-984567:1:exon
so has part: feature:984728-984835:1:exon
so has part: feature:985090-985204:1:exon
so has part: feature:985312-985396:1:exon
so has part: feature:985570-985673:1:exon
so has part: feature:985783-985869:1:exon
so has part: feature:986190-986368:1:exon
so has part: feature:986555-986657:1:exon
so has part: feature:987475-987636:1:exon
so has part: feature:988063-988168:1:exon
so has part: feature:988284-988383:1:exon
so has part: feature:988598-988806:1:exon
so has part: feature:988913-989055:1:exon

XP_015481426.1
type: Protein
SIO_000068: ncbiprotein

position:983238:1
position: 983238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989055:1
position: 989055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983238-983347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983468-983683:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:984194-984303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:984453-984567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:984728-984835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:985090-985204:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:985312-985396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:985570-985673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985783-985869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986190-986368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986555-986657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987475-987636:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988063-988168:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988284-988383:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988598-988806:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988913-989055:1:exon

SYTL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SYTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-like protein 4
translation: MSEAVDLSFLSDAERDLILQVLQRDEELRKAEERRIRRLKNELLEIRRKGAKRGSQRYSERTCARCQQSLGRVSPKANTCRGCNHLVCRDCRSCSPSGSWRCKVCTKEAELKKTTGDWFYDQRVNRFANHLGSDMVRLSLRHRPAASKRETVGQTLLQKAQLSEPKSSSAVRQPSPPAPREGSSLFPDASDPRDGKSDTESMENMSLDSYRPSPADVGGRRNSPERAVPGKQVVVPAGPASSSLTLPLRSKNAFSDGRDATVGTRSSTCEHETLFKKNPRRVVRPADYTKSVIDLRPEDLVGEGGSLGDRSKSVPGLNTELEEEEEDIDNLVEIHRQRVARGSMRSGTSSSTLGSMVSIYSEAGDFGSVAVTGGISFSLSYEQKTQTLFIHVKECRQLAYGDEGRKRSNPYVKTYLLPDKSRQGKRKTTIKRNTINPLYNELLKYEISKSLLLARTLQFSVWHHDRFGRNTFLGEVEVPLDAWNFESHLEEFLPLHGKAGADAAGLHQYKGELVVSMKYIPSAKHPGAGNGRKGKTGEGGELQVWIKEAKNLTAAKSGGTSDSFVKGYLLPHKNKASKRKTPVVKKTLNPHYNHTFVYNGVNPEDLQHICLELTVWDREPLSSNDFLGGVRLGVGNGMSNGQAVDWMDSTGEELNLWQKMCQYPGSWAEGTLQLRSTMAKLRL
SIO_010081: SYTL4
subclass of: SO_0000673
so part of: SYTL4
location: join(983238..983347,983468..983683,984194..984303,984453..984567,984728..984835,985090..985204,985312..985396,985570..985673,985783..985869,986190..986368,986555..986657,987475..987636,988063..988168,988284..988383,988598..988806,988913..989055)
location: region:983238-989055:1
so has part: feature:983238-983347:1:exon
so has part: feature:983468-983683:1:exon
so has part: feature:984194-984303:1:exon
so has part: feature:984453-984567:1:exon
so has part: feature:984728-984835:1:exon
so has part: feature:985090-985204:1:exon
so has part: feature:985312-985396:1:exon
so has part: feature:985570-985673:1:exon
so has part: feature:985783-985869:1:exon
so has part: feature:986190-986368:1:exon
so has part: feature:986555-986657:1:exon
so has part: feature:987475-987636:1:exon
so has part: feature:988063-988168:1:exon
so has part: feature:988284-988383:1:exon
so has part: feature:988598-988806:1:exon
so has part: feature:988913-989055:1:exon

XP_015481429.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:983238-983347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:983468-983683:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:984194-984303:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:984453-984567:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:984728-984835:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:985090-985204:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:985312-985396:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:985570-985673:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985783-985869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986190-986368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:986555-986657:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:987475-987636:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:988063-988168:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:988284-988383:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:988598-988806:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:988913-989055:1:exon

SRPX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(989531..995535)
location: region:989531-995535:-1
so has part: feature:989531-995535:-1:exon
subclass of: SO_0000010

107203741
type: Gene
SIO_000068: ncbigene

position:989531:-1
position: 989531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995535:-1
position: 995535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989531-995535:-1:exon

SRPX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: SRPX2
product: sushi repeat containing protein X-linked 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_015626112.3
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(989531..990303,990595..990716,990784..990917,991047..991226,991333..991454,991548..991674,991990..992166,992450..992641,992728..992811,994559..995535))
location: region:989531-995535:-1
so has part: feature:994559-995535:-1:exon
so has part: feature:992728-992811:-1:exon
so has part: feature:992450-992641:-1:exon
so has part: feature:991990-992166:-1:exon
so has part: feature:991548-991674:-1:exon
so has part: feature:991333-991454:-1:exon
so has part: feature:991047-991226:-1:exon
so has part: feature:990784-990917:-1:exon
so has part: feature:990595-990716:-1:exon
so has part: feature:989531-990303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:994559-995535:-1:exon

position:994559:-1
position: 994559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:992728-992811:-1:exon

position:992728:-1
position: 992728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992811:-1
position: 992811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:992450-992641:-1:exon

position:992450:-1
position: 992450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992641:-1
position: 992641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:991990-992166:-1:exon

position:991990:-1
position: 991990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992166:-1
position: 992166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:991548-991674:-1:exon

position:991548:-1
position: 991548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991674:-1
position: 991674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:991333-991454:-1:exon

position:991333:-1
position: 991333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991454:-1
position: 991454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:991047-991226:-1:exon

position:991047:-1
position: 991047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991226:-1
position: 991226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:990784-990917:-1:exon

position:990784:-1
position: 990784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990917:-1
position: 990917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:990595-990716:-1:exon

position:990595:-1
position: 990595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990716:-1
position: 990716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:989531-990303:-1:exon

position:990303:-1
position: 990303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRPX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: SRPX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sushi repeat-containing protein SRPX2
translation: MAQEAAPVLLVVLARLVSSTWHEGSGYYLESRTNEVYAEEAAPEPALDYRRVPQWCATLIIHRGEASCYSPRGSSYRSSLGTRCELSCARGYRLQGPSTVQCLPSRHWSGMPYCRQIRCHVLPAVLRGSYVCSAGVQMDSRCDYTCLPGYQLEGDRSRVCMEDGRWSGSEPVCVDLEPPKIRCPDSRERIAEPGKLTATVYWDPPRVRDSADGVIKRVMLRGPEPGSEFPEGEHVIRYTAHDQAYNRASCKFSIRVQVRRCPVLKPPQNGYISCTSDGNNYGATCEYLCDGGYERQGTSLRVCQSTQQWTGSQPLCAPMQINTDVSSAASLLDQFHEKRRLFVISAPDPSNRYYKMQISMLQQAACGLDLRHITTVELLGQPPHEVGRIREHRLSLGIIEELRRFLHLTRSHFNAVLLDKAGTDRERYISPVSPDELFVFIDTYLLSEREAARRAQSGDPCE
SIO_010081: SRPX2
subclass of: SO_0000673
so part of: SRPX2
location: complement(join(990123..990303,990595..990716,990784..990917,991047..991226,991333..991454,991548..991674,991990..992166,992450..992641,992728..992811,994559..994628))
location: region:990123-994628:-1
so has part: feature:994559-994628:-1:exon
so has part: feature:992728-992811:-1:exon
so has part: feature:992450-992641:-1:exon
so has part: feature:991990-992166:-1:exon
so has part: feature:991548-991674:-1:exon
so has part: feature:991333-991454:-1:exon
so has part: feature:991047-991226:-1:exon
so has part: feature:990784-990917:-1:exon
so has part: feature:990595-990716:-1:exon
so has part: feature:990123-990303:-1:exon

XP_015481598.1
type: Protein
SIO_000068: ncbiprotein

position:990123:-1
position: 990123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994628:-1
position: 994628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:994559-994628:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:992728-992811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:992450-992641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:991990-992166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:991548-991674:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:991333-991454:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:991047-991226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:990784-990917:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:990595-990716:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:990123-990303:-1:exon

TSPAN6
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 997174..1002487
location: region:997174-1002487:1
so has part: feature:997174-1002487:1:exon
subclass of: SO_0000010

107203659
type: Gene
SIO_000068: ncbigene

position:997174:1
position: 997174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002487:1
position: 1002487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997174-1002487:1:exon

TSPAN6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TSPAN6
product: tetraspanin 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_015625964.3
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(997174..997301,997396..997584,997791..997865,998411..998509,998712..998867,999533..999616,1001464..1001563,1001769..1002487)
location: region:997174-1002487:1
so has part: feature:997174-997301:1:exon
so has part: feature:997396-997584:1:exon
so has part: feature:997791-997865:1:exon
so has part: feature:998411-998509:1:exon
so has part: feature:998712-998867:1:exon
so has part: feature:999533-999616:1:exon
so has part: feature:1001464-1001563:1:exon
so has part: feature:1001769-1002487:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997174-997301:1:exon

position:997301:1
position: 997301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:997396-997584:1:exon

position:997396:1
position: 997396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997584:1
position: 997584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:997791-997865:1:exon

position:997791:1
position: 997791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997865:1
position: 997865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:998411-998509:1:exon

position:998411:1
position: 998411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998509:1
position: 998509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:998712-998867:1:exon

position:998712:1
position: 998712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998867:1
position: 998867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:999533-999616:1:exon

position:999533:1
position: 999533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999616:1
position: 999616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1001464-1001563:1:exon

position:1001464:1
position: 1001464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001563:1
position: 1001563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1001769-1002487:1:exon

position:1001769:1
position: 1001769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TSPAN6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TSPAN6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetraspanin-6
translation: MASPSRRLQTKPVITCLKSVLLTYTFIFWVSGIVLLAVGIWGRVSLAVYFSLLDEKATNVPFVLVGAGTVVVLLGTFGCFATCRGSTWMLKLYAMLLSLIFLIVLVAAIVGFVFRHEIKTNFESNLELALKDYNVTADRHSEAVDTIQRTLHCCGVQSYSDWEKTEYFSQKGIPQSCCKNQNDCSEEDLKDPNKAKLKVFVDGCFFLVTSTMESKMSVVAGISFGIACFQLIGIVLSCCLSRYITNNQYEMV
SIO_010081: TSPAN6
subclass of: SO_0000673
so part of: TSPAN6
location: join(997215..997301,997396..997584,997791..997865,998411..998509,998712..998867,999533..999616,1001464..1001532)
location: region:997215-1001532:1
so has part: feature:997215-997301:1:exon
so has part: feature:997396-997584:1:exon
so has part: feature:997791-997865:1:exon
so has part: feature:998411-998509:1:exon
so has part: feature:998712-998867:1:exon
so has part: feature:999533-999616:1:exon
so has part: feature:1001464-1001532:1:exon

XP_015481450.1
type: Protein
SIO_000068: ncbiprotein

position:997215:1
position: 997215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001532:1
position: 1001532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997215-997301:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:997396-997584:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:997791-997865:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:998411-998509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:998712-998867:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:999533-999616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1001464-1001532:1:exon

TNMD
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: TNMD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1004788..1013283)
location: region:1004788-1013283:-1
so has part: feature:1004788-1013283:-1:exon
subclass of: SO_0000010

107203753
type: Gene
SIO_000068: ncbigene

position:1004788:-1
position: 1004788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013283:-1
position: 1013283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1004788-1013283:-1:exon

TNMD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: TNMD
product: tenomodulin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_015626121.2
SIO_010081: TNMD
subclass of: SO_0000673
so part of: TNMD
location: complement(join(1004788..1005382,1005625..1005797,1006981..1007134,1008835..1008936,1009722..1009862,1012946..1013080,1013203..1013283))
location: region:1004788-1013283:-1
so has part: feature:1013203-1013283:-1:exon
so has part: feature:1012946-1013080:-1:exon
so has part: feature:1009722-1009862:-1:exon
so has part: feature:1008835-1008936:-1:exon
so has part: feature:1006981-1007134:-1:exon
so has part: feature:1005625-1005797:-1:exon
so has part: feature:1004788-1005382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1013203-1013283:-1:exon

position:1013203:-1
position: 1013203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1012946-1013080:-1:exon

position:1012946:-1
position: 1012946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013080:-1
position: 1013080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1009722-1009862:-1:exon

position:1009722:-1
position: 1009722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009862:-1
position: 1009862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1008835-1008936:-1:exon

position:1008835:-1
position: 1008835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008936:-1
position: 1008936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1006981-1007134:-1:exon

position:1006981:-1
position: 1006981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007134:-1
position: 1007134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1005625-1005797:-1:exon

position:1005625:-1
position: 1005625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005797:-1
position: 1005797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1004788-1005382:-1:exon

position:1005382:-1
position: 1005382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TNMD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: TNMD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tenomodulin
translation: MGGTARHSPERCRFLDAEAAKPRKKSCPGYQLCGLLLCVLLLSLILIFFGVRYLWNPAPRKVYDMEHTFFSNGEKKKIVMEIDPLTRTETFSSGNGSEEILEIHDFKNGITGIFFVGLQKCFIKTQTKVLPETTEAKIPELEGQEITTTYFEQSVVWVPGEKPIQNKEFLKSSKIFDICKNVTIFWIHPTPIAAPELANLEGTEEEDPELLMDNQSWLDVGSERELEKEAQAGPKRRARQLTEEDLPVNDYSENGLEFHPLWDERGYCCARCRRANRYCRRVCEPLLGYHPYPYCYQGGRVICRIIMPCNWWIARMLGRV
SIO_010081: TNMD
subclass of: SO_0000673
so part of: TNMD
location: complement(join(1005173..1005382,1005625..1005797,1006981..1007134,1008835..1008936,1009722..1009862,1012946..1013080,1013203..1013250))
location: region:1005173-1013250:-1
so has part: feature:1013203-1013250:-1:exon
so has part: feature:1012946-1013080:-1:exon
so has part: feature:1009722-1009862:-1:exon
so has part: feature:1008835-1008936:-1:exon
so has part: feature:1006981-1007134:-1:exon
so has part: feature:1005625-1005797:-1:exon
so has part: feature:1005173-1005382:-1:exon

XP_015481607.1
type: Protein
SIO_000068: ncbiprotein

position:1005173:-1
position: 1005173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013250:-1
position: 1013250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013203-1013250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1012946-1013080:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1009722-1009862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1008835-1008936:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006981-1007134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1005625-1005797:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005173-1005382:-1:exon

PCDH19
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1039497..1096524
location: region:1039497-1096524:1
so has part: feature:1039497-1096524:1:exon
subclass of: SO_0000010

107203682
type: Gene
SIO_000068: ncbigene

position:1039497:1
position: 1039497
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1096524:1
position: 1096524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039497-1096524:1:exon

PCDH19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PCDH19
product: protocadherin 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015625993.1
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(<1039497..1041619,1044583..1044910,1066576..1066634,1069896..1070065,1091578..1096524)
location: region:1039497-1096524:1
so has part: feature:1039497-1041619:1:exon
so has part: feature:1044583-1044910:1:exon
so has part: feature:1066576-1066634:1:exon
so has part: feature:1069896-1070065:1:exon
so has part: feature:1091578-1096524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1039497-1041619:1:exon

position:1041619:1
position: 1041619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1044583-1044910:1:exon

position:1044583:1
position: 1044583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044910:1
position: 1044910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1066576-1066634:1:exon

position:1066576:1
position: 1066576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066634:1
position: 1066634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1069896-1070065:1:exon

position:1069896:1
position: 1069896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070065:1
position: 1070065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1091578-1096524:1:exon

position:1091578:1
position: 1091578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PCDH19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-19
translation: LLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFRVVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDLNDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRGDGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPAYTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSGAIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENAPPGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLTIQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGNPSLQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGRLSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYLSPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSYGHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVESQNNRNAGSNHIYHHTFTGQSPQQPDLIINGMPLPETENYSFDSNYVNSRAHLIKSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDVLNTSVPSMGSQGPEQEQSEAFHCREECRILGHSDRCWMPRGAVPSRAKSPEHGRNVIALSIEATAVDAEPYADCSTKRTFATFGKEGGEPPAEERLANPKGKRTMDSAACSPKVSGAVREAGNGCEAVSPITSPLHLKSPLSGKPGAPYGAGHCAGSREPLGNTGPSRPSEAEPRGADSESSGQEGNPLLQERREKDSPGARRLKDIVL
SIO_010081: PCDH19
subclass of: SO_0000673
so part of: PCDH19
location: join(<1039497..1041619,1044583..1044910,1066576..1066634,1069896..1070065,1091578..1092161)
location: region:1039497-1092161:1
so has part: feature:1039497-1041619:1:exon
so has part: feature:1044583-1044910:1:exon
so has part: feature:1066576-1066634:1:exon
so has part: feature:1069896-1070065:1:exon
so has part: feature:1091578-1092161:1:exon

XP_015481479.1
type: Protein
SIO_000068: ncbiprotein

position:1092161:1
position: 1092161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039497-1041619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044583-1044910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1066576-1066634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069896-1070065:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1091578-1092161:1:exon

LOC107204067
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107204067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1207003..1225203)
location: region:1207003-1225203:-1
so has part: feature:1207003-1225203:-1:exon
subclass of: SO_0000011

107204067
type: Gene
SIO_000068: ncbigene

position:1207003:-1
position: 1207003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1225203:-1
position: 1225203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1207003-1225203:-1:exon

LOC107204067
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107204067
product: uncharacterized LOC107204067, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004497301.1
SIO_010081: LOC107204067
subclass of: SO_0000673
so part of: LOC107204067
location: complement(join(1207003..1207191,1217970..1219460,1220155..1220222,1225129..1225203))
location: region:1207003-1225203:-1
so has part: feature:1225129-1225203:-1:exon
so has part: feature:1220155-1220222:-1:exon
so has part: feature:1217970-1219460:-1:exon
so has part: feature:1207003-1207191:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225129-1225203:-1:exon

position:1225129:-1
position: 1225129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1220155-1220222:-1:exon

position:1220155:-1
position: 1220155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220222:-1
position: 1220222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1217970-1219460:-1:exon

position:1217970:-1
position: 1217970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219460:-1
position: 1219460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1207003-1207191:-1:exon

position:1207191:-1
position: 1207191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107204067
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107204067
product: uncharacterized LOC107204067, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004497300.1
SIO_010081: LOC107204067
subclass of: SO_0000673
so part of: LOC107204067
location: complement(join(1215840..1216094,1217970..1219460,1220155..1220222,1225129..1225203))
location: region:1215840-1225203:-1
so has part: feature:1225129-1225203:-1:exon
so has part: feature:1220155-1220222:-1:exon
so has part: feature:1217970-1219460:-1:exon
so has part: feature:1215840-1216094:-1:exon

position:1215840:-1
position: 1215840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225129-1225203:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1220155-1220222:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1217970-1219460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1215840-1216094:-1:exon

position:1216094:-1
position: 1216094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107204068
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107204068
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1243268..1253904
location: region:1243268-1253904:1
so has part: feature:1243268-1253904:1:exon
subclass of: SO_0000011

107204068
type: Gene
SIO_000068: ncbigene

position:1243268:1
position: 1243268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253904:1
position: 1253904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1243268-1253904:1:exon

LOC107204068
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107204068
product: uncharacterized LOC107204068
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001521462.2
SIO_010081: LOC107204068
subclass of: SO_0000673
so part of: LOC107204068
location: join(1243268..1243364,1244467..1244641,1253742..1253904)
location: region:1243268-1253904:1
so has part: feature:1243268-1243364:1:exon
so has part: feature:1244467-1244641:1:exon
so has part: feature:1253742-1253904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1243268-1243364:1:exon

position:1243364:1
position: 1243364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1244467-1244641:1:exon

position:1244467:1
position: 1244467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244641:1
position: 1244641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1253742-1253904:1:exon

position:1253742:1
position: 1253742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DIAPH2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1645785..1815826)
location: region:1645785-1815826:-1
so has part: feature:1645785-1815826:-1:exon
subclass of: SO_0000010

107203813
type: Gene
SIO_000068: ncbigene

position:1645785:-1
position: 1645785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815826:-1
position: 1815826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1645785-1815826:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_015626236.3
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1645785..1650385,1697332..1697427,1708055..1708190,1715867..1716031,1732377..1732501,1742955..1743084,1747946..1748185,1753310..1753411,1755087..1755181,1756541..1756642,1774469..1774583,1776850..1777410,1779027..1779131,1779899..1779963,1780437..1780555,1781073..1781189,1782113..1782231,1784011..1784121,1786402..1786513,1787299..1787435,1788480..1788549,1788631..1788705,1789083..1789222,1793240..1793260,1796960..1797064,1797929..1798105,1815646..1815826))
location: region:1645785-1815826:-1
so has part: feature:1815646-1815826:-1:exon
so has part: feature:1797929-1798105:-1:exon
so has part: feature:1796960-1797064:-1:exon
so has part: feature:1793240-1793260:-1:exon
so has part: feature:1789083-1789222:-1:exon
so has part: feature:1788631-1788705:-1:exon
so has part: feature:1788480-1788549:-1:exon
so has part: feature:1787299-1787435:-1:exon
so has part: feature:1786402-1786513:-1:exon
so has part: feature:1784011-1784121:-1:exon
so has part: feature:1782113-1782231:-1:exon
so has part: feature:1781073-1781189:-1:exon
so has part: feature:1780437-1780555:-1:exon
so has part: feature:1779899-1779963:-1:exon
so has part: feature:1779027-1779131:-1:exon
so has part: feature:1776850-1777410:-1:exon
so has part: feature:1774469-1774583:-1:exon
so has part: feature:1756541-1756642:-1:exon
so has part: feature:1755087-1755181:-1:exon
so has part: feature:1753310-1753411:-1:exon
so has part: feature:1747946-1748185:-1:exon
so has part: feature:1742955-1743084:-1:exon
so has part: feature:1732377-1732501:-1:exon
so has part: feature:1715867-1716031:-1:exon
so has part: feature:1708055-1708190:-1:exon
so has part: feature:1697332-1697427:-1:exon
so has part: feature:1645785-1650385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1815646-1815826:-1:exon

position:1815646:-1
position: 1815646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1797929-1798105:-1:exon

position:1797929:-1
position: 1797929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798105:-1
position: 1798105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1796960-1797064:-1:exon

position:1796960:-1
position: 1796960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1797064:-1
position: 1797064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1793240-1793260:-1:exon

position:1793240:-1
position: 1793240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1793260:-1
position: 1793260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1789083-1789222:-1:exon

position:1789083:-1
position: 1789083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789222:-1
position: 1789222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015626235.3
SIO_010081: DIAPH2
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DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_015626234.3
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
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location: region:1645785-1815826:-1
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DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015626238.3
SIO_010081: DIAPH2
subclass of: SO_0000673
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urn:…
SIO_000300: 26
SIO_000628: feature:1697332-1697427:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1645785-1650385:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X3
translation: MDGHAAPGAGGEEALGSGRMNAKRGGRAAEEESRNKPKLRDRITSFRKSAVKREKLLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIIGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELESEVKQLRTQGPGLTEVPAIPPALPSDNALPSPAPSLPGGAIPPPPPLPGGGAIPPPPPLPGGTAIPPPPPLPGGPTIPPPPPLPGGAVIPPPPPLPGASLPPPPPPLPGGAIPPPPPLPGVPPAPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGVPFAPFPMVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDSKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1650321..1650385,1697332..1697427,1708055..1708190,1715867..1716031,1732377..1732501,1742955..1743084,1747946..1748185,1753310..1753411,1755087..1755181,1756541..1756642,1774469..1774583,1776850..1777410,1779027..1779131,1779899..1779963,1780437..1780555,1781073..1781189,1782113..1782231,1784011..1784121,1786402..1786513,1787299..1787435,1788480..1788549,1788631..1788705,1789083..1789222,1793240..1793260,1796960..1797064,1797929..1798105,1815646..1815762))
location: region:1650321-1815762:-1
so has part: feature:1815646-1815762:-1:exon
so has part: feature:1797929-1798105:-1:exon
so has part: feature:1796960-1797064:-1:exon
so has part: feature:1793240-1793260:-1:exon
so has part: feature:1789083-1789222:-1:exon
so has part: feature:1788631-1788705:-1:exon
so has part: feature:1788480-1788549:-1:exon
so has part: feature:1787299-1787435:-1:exon
so has part: feature:1786402-1786513:-1:exon
so has part: feature:1784011-1784121:-1:exon
so has part: feature:1782113-1782231:-1:exon
so has part: feature:1781073-1781189:-1:exon
so has part: feature:1780437-1780555:-1:exon
so has part: feature:1779899-1779963:-1:exon
so has part: feature:1779027-1779131:-1:exon
so has part: feature:1776850-1777410:-1:exon
so has part: feature:1774469-1774583:-1:exon
so has part: feature:1756541-1756642:-1:exon
so has part: feature:1755087-1755181:-1:exon
so has part: feature:1753310-1753411:-1:exon
so has part: feature:1747946-1748185:-1:exon
so has part: feature:1742955-1743084:-1:exon
so has part: feature:1732377-1732501:-1:exon
so has part: feature:1715867-1716031:-1:exon
so has part: feature:1708055-1708190:-1:exon
so has part: feature:1697332-1697427:-1:exon
so has part: feature:1650321-1650385:-1:exon

XP_015481722.1
type: Protein
SIO_000068: ncbiprotein

position:1650321:-1
position: 1650321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815762:-1
position: 1815762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1815646-1815762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1797929-1798105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1796960-1797064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1793240-1793260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1789083-1789222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1788631-1788705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1788480-1788549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1787299-1787435:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786402-1786513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1784011-1784121:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782113-1782231:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1781073-1781189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1780437-1780555:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779899-1779963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1779027-1779131:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1776850-1777410:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1774469-1774583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1756541-1756642:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1755087-1755181:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1753310-1753411:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1747946-1748185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1742955-1743084:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1732377-1732501:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1715867-1716031:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1708055-1708190:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697332-1697427:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1650321-1650385:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X2
translation: MDGHAAPGAGGEEALGSGRMNAKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKSAVKREKLLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIIGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELESEVKQLRTQGPGLTEVPAIPPALPSDNALPSPAPSLPGGAIPPPPPLPGGGAIPPPPPLPGGTAIPPPPPLPGGPTIPPPPPLPGGAVIPPPPPLPGASLPPPPPPLPGGAIPPPPPLPGVPPAPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGVPFAPFPMVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDSKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1650321..1650385,1697332..1697427,1708055..1708190,1715867..1716031,1732377..1732501,1742955..1743084,1747946..1748185,1753310..1753411,1755087..1755181,1756541..1756642,1774469..1774583,1776850..1777410,1779027..1779131,1779899..1779963,1780437..1780555,1781073..1781189,1782113..1782231,1784011..1784121,1786402..1786513,1787299..1787435,1788480..1788549,1788631..1788705,1789083..1789222,1796960..1797064,1797929..1798105,1800361..1800393,1815646..1815762))
location: region:1650321-1815762:-1
so has part: feature:1815646-1815762:-1:exon
so has part: feature:1800361-1800393:-1:exon
so has part: feature:1797929-1798105:-1:exon
so has part: feature:1796960-1797064:-1:exon
so has part: feature:1789083-1789222:-1:exon
so has part: feature:1788631-1788705:-1:exon
so has part: feature:1788480-1788549:-1:exon
so has part: feature:1787299-1787435:-1:exon
so has part: feature:1786402-1786513:-1:exon
so has part: feature:1784011-1784121:-1:exon
so has part: feature:1782113-1782231:-1:exon
so has part: feature:1781073-1781189:-1:exon
so has part: feature:1780437-1780555:-1:exon
so has part: feature:1779899-1779963:-1:exon
so has part: feature:1779027-1779131:-1:exon
so has part: feature:1776850-1777410:-1:exon
so has part: feature:1774469-1774583:-1:exon
so has part: feature:1756541-1756642:-1:exon
so has part: feature:1755087-1755181:-1:exon
so has part: feature:1753310-1753411:-1:exon
so has part: feature:1747946-1748185:-1:exon
so has part: feature:1742955-1743084:-1:exon
so has part: feature:1732377-1732501:-1:exon
so has part: feature:1715867-1716031:-1:exon
so has part: feature:1708055-1708190:-1:exon
so has part: feature:1697332-1697427:-1:exon
so has part: feature:1650321-1650385:-1:exon

XP_015481721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1815646-1815762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800361-1800393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1797929-1798105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1796960-1797064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1789083-1789222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1788631-1788705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1788480-1788549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1787299-1787435:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786402-1786513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1784011-1784121:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782113-1782231:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1781073-1781189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1780437-1780555:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779899-1779963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1779027-1779131:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1776850-1777410:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1774469-1774583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1756541-1756642:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1755087-1755181:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1753310-1753411:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1747946-1748185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1742955-1743084:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1732377-1732501:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1715867-1716031:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1708055-1708190:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697332-1697427:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1650321-1650385:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X1
translation: MDGHAAPGAGGEEALGSGRMNAKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKSAVKREKLLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIIGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELESEVKQLRTQGPGLTEVPAIPPALPSDNALPSPAPSLPGGAIPPPPPLPGGGAIPPPPPLPGGTAIPPPPPLPGGPTIPPPPPLPGGAVIPPPPPLPGASLPPPPPPLPGGAIPPPPPLPGVPPAPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGVPFAPFPMVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDSKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1650321..1650385,1697332..1697427,1708055..1708190,1715867..1716031,1732377..1732501,1742955..1743084,1747946..1748185,1753310..1753411,1755087..1755181,1756541..1756642,1774469..1774583,1776850..1777410,1779027..1779131,1779899..1779963,1780437..1780555,1781073..1781189,1782113..1782231,1784011..1784121,1786402..1786513,1787299..1787435,1788480..1788549,1788631..1788705,1789083..1789222,1793240..1793260,1796960..1797064,1797929..1798105,1800361..1800393,1815646..1815762))
location: region:1650321-1815762:-1
so has part: feature:1815646-1815762:-1:exon
so has part: feature:1800361-1800393:-1:exon
so has part: feature:1797929-1798105:-1:exon
so has part: feature:1796960-1797064:-1:exon
so has part: feature:1793240-1793260:-1:exon
so has part: feature:1789083-1789222:-1:exon
so has part: feature:1788631-1788705:-1:exon
so has part: feature:1788480-1788549:-1:exon
so has part: feature:1787299-1787435:-1:exon
so has part: feature:1786402-1786513:-1:exon
so has part: feature:1784011-1784121:-1:exon
so has part: feature:1782113-1782231:-1:exon
so has part: feature:1781073-1781189:-1:exon
so has part: feature:1780437-1780555:-1:exon
so has part: feature:1779899-1779963:-1:exon
so has part: feature:1779027-1779131:-1:exon
so has part: feature:1776850-1777410:-1:exon
so has part: feature:1774469-1774583:-1:exon
so has part: feature:1756541-1756642:-1:exon
so has part: feature:1755087-1755181:-1:exon
so has part: feature:1753310-1753411:-1:exon
so has part: feature:1747946-1748185:-1:exon
so has part: feature:1742955-1743084:-1:exon
so has part: feature:1732377-1732501:-1:exon
so has part: feature:1715867-1716031:-1:exon
so has part: feature:1708055-1708190:-1:exon
so has part: feature:1697332-1697427:-1:exon
so has part: feature:1650321-1650385:-1:exon

XP_015481720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1815646-1815762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800361-1800393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1797929-1798105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1796960-1797064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1793240-1793260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1789083-1789222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1788631-1788705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1788480-1788549:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1787299-1787435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1786402-1786513:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1784011-1784121:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1782113-1782231:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1781073-1781189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1780437-1780555:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1779899-1779963:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1779027-1779131:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1776850-1777410:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1774469-1774583:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1756541-1756642:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1755087-1755181:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1753310-1753411:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1747946-1748185:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1742955-1743084:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1732377-1732501:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1715867-1716031:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1708055-1708190:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697332-1697427:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1650321-1650385:-1:exon

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X5
translation: MRDRITSFRKSAVKREKLLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIIGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELESEVKQLRTQGPGLTEVPAIPPALPSDNALPSPAPSLPGGAIPPPPPLPGGGAIPPPPPLPGGTAIPPPPPLPGGPTIPPPPPLPGGAVIPPPPPLPGASLPPPPPPLPGGAIPPPPPLPGVPPAPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGVPFAPFPMVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDSKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDNKRVTLERSRSRHNGAIAAV
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1650321..1650385,1697332..1697427,1708055..1708190,1715867..1716031,1732377..1732501,1742955..1743084,1747946..1748185,1753310..1753411,1755087..1755181,1756541..1756642,1774469..1774583,1776850..1777410,1779027..1779131,1779899..1779963,1780437..1780555,1781073..1781189,1782113..1782231,1784011..1784121,1786402..1786513,1787299..1787435,1788480..1788549,1788631..1788705,1789083..1789222,1793240..1793260,1796960..1797064,1797929..1798105,1800329..1800331))
location: region:1650321-1800331:-1
so has part: feature:1800329-1800331:-1:exon
so has part: feature:1797929-1798105:-1:exon
so has part: feature:1796960-1797064:-1:exon
so has part: feature:1793240-1793260:-1:exon
so has part: feature:1789083-1789222:-1:exon
so has part: feature:1788631-1788705:-1:exon
so has part: feature:1788480-1788549:-1:exon
so has part: feature:1787299-1787435:-1:exon
so has part: feature:1786402-1786513:-1:exon
so has part: feature:1784011-1784121:-1:exon
so has part: feature:1782113-1782231:-1:exon
so has part: feature:1781073-1781189:-1:exon
so has part: feature:1780437-1780555:-1:exon
so has part: feature:1779899-1779963:-1:exon
so has part: feature:1779027-1779131:-1:exon
so has part: feature:1776850-1777410:-1:exon
so has part: feature:1774469-1774583:-1:exon
so has part: feature:1756541-1756642:-1:exon
so has part: feature:1755087-1755181:-1:exon
so has part: feature:1753310-1753411:-1:exon
so has part: feature:1747946-1748185:-1:exon
so has part: feature:1742955-1743084:-1:exon
so has part: feature:1732377-1732501:-1:exon
so has part: feature:1715867-1716031:-1:exon
so has part: feature:1708055-1708190:-1:exon
so has part: feature:1697332-1697427:-1:exon
so has part: feature:1650321-1650385:-1:exon

XP_015481724.1
type: Protein
SIO_000068: ncbiprotein

position:1800331:-1
position: 1800331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1800329-1800331:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1797929-1798105:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1796960-1797064:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1793240-1793260:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1789083-1789222:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1788631-1788705:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1788480-1788549:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1787299-1787435:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1786402-1786513:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1784011-1784121:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1782113-1782231:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1781073-1781189:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1780437-1780555:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1779899-1779963:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1779027-1779131:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1776850-1777410:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1774469-1774583:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1756541-1756642:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1755087-1755181:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1753310-1753411:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1747946-1748185:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1742955-1743084:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1732377-1732501:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1715867-1716031:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1708055-1708190:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1697332-1697427:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1650321-1650385:-1:exon

DIAPH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DIAPH2
product: diaphanous related formin 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_015626237.3
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1696049..1696314,1697332..1697427,1708055..1708190,1715867..1716031,1732377..1732501,1742955..1743084,1747946..1748185,1753310..1753411,1755087..1755181,1756541..1756642,1774469..1774583,1776850..1777410,1779027..1779131,1779899..1779963,1780437..1780555,1781073..1781189,1782113..1782231,1784011..1784121,1786402..1786513,1787299..1787435,1788480..1788549,1788631..1788705,1789083..1789222,1793240..1793260,1796960..1797064,1797929..1798105,1800361..1800393,1815646..1815826))
location: region:1696049-1815826:-1
so has part: feature:1815646-1815826:-1:exon
so has part: feature:1800361-1800393:-1:exon
so has part: feature:1797929-1798105:-1:exon
so has part: feature:1796960-1797064:-1:exon
so has part: feature:1793240-1793260:-1:exon
so has part: feature:1789083-1789222:-1:exon
so has part: feature:1788631-1788705:-1:exon
so has part: feature:1788480-1788549:-1:exon
so has part: feature:1787299-1787435:-1:exon
so has part: feature:1786402-1786513:-1:exon
so has part: feature:1784011-1784121:-1:exon
so has part: feature:1782113-1782231:-1:exon
so has part: feature:1781073-1781189:-1:exon
so has part: feature:1780437-1780555:-1:exon
so has part: feature:1779899-1779963:-1:exon
so has part: feature:1779027-1779131:-1:exon
so has part: feature:1776850-1777410:-1:exon
so has part: feature:1774469-1774583:-1:exon
so has part: feature:1756541-1756642:-1:exon
so has part: feature:1755087-1755181:-1:exon
so has part: feature:1753310-1753411:-1:exon
so has part: feature:1747946-1748185:-1:exon
so has part: feature:1742955-1743084:-1:exon
so has part: feature:1732377-1732501:-1:exon
so has part: feature:1715867-1716031:-1:exon
so has part: feature:1708055-1708190:-1:exon
so has part: feature:1697332-1697427:-1:exon
so has part: feature:1696049-1696314:-1:exon

position:1696049:-1
position: 1696049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1815646-1815826:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800361-1800393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1797929-1798105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1796960-1797064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1793240-1793260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1789083-1789222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1788631-1788705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1788480-1788549:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1787299-1787435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1786402-1786513:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1784011-1784121:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1782113-1782231:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1781073-1781189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1780437-1780555:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1779899-1779963:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1779027-1779131:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1776850-1777410:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1774469-1774583:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1756541-1756642:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1755087-1755181:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1753310-1753411:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1747946-1748185:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1742955-1743084:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1732377-1732501:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1715867-1716031:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1708055-1708190:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697332-1697427:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1696049-1696314:-1:exon

position:1696314:-1
position: 1696314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DIAPH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DIAPH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein diaphanous homolog 2 isoform X4
translation: MDGHAAPGAGGEEALGSGRMNAKRGGRAAEEESRNKPKLNIQIKTLADDVRDRITSFRKSAVKREKLLIQHPIDSQPSISEIPHAQALVDERCMNLSEKEVMDLFEKMMEDMNLNEERKAPLRDKDLSTKREMVVQYISATAKSIVGSKVPGGLKNSKHECTLSSQEYIHELRSGISDEKLLNCLESLRVSLTSNPVSWVNNFGHEGLGLLLDALEKLLDKKQQESIDKKNQHKLIQCLKAFMNNKYGLQRILGDERSLLLLSRAIDPKQPHMMTETVKILSAICIIGEENILDKLLGAITTAAERHSREERFSQIVEGLENHEFIQLQVACMQLINALVTSPEDLDFRIHLRNEFLRCGLKKILPALKDKENDELDIQLRVFDENKDEDHFELSHRLNDIKAEMDDVSEVFHLLYNMVKDTSSENYFLSILQHFLLIRNDYYVRPQYYKIIEECVSQIVLHCSGMDPDFKYRGRMDINFTHLVDACVDKAKVEESEKKAAEFSRKFDEEFTARQEAQAELQKREEKIKELESEVKQLRTQGPGLTEVPAIPPALPSDNALPSPAPSLPGGAIPPPPPLPGGGAIPPPPPLPGGTAIPPPPPLPGGPTIPPPPPLPGGAVIPPPPPLPGASLPPPPPPLPGGAIPPPPPLPGVPPAPPLPGGAGPPPPPPLPGGAIPPPPPFGGPPMPPPLGGVPFAPFPMVPALPHGMKEKKKYKLEVSMKRINWSKIEPQEIGENSFWVKAEEDKFEDPELFAKLALTFGTQMKAKKPVEESEEKKAAQSKKKIKELRVLDGKSAQNLSIFLGSFRLPYEEIKNIILEVDEEKLSESLIQNLVKNLPEQKELNALAELKDEYNDLAEPEQFGVVMSSVKMLRARLNGILFRLMFEEHVNNIKPDIMAVTLACEELKKSESFSKLLELVLFLGNYMNSGSRNAQSLGFNISFLCKIRDTKSSDQKTTLLHFLAEICEENYRDILKFPDELQHVESASKVSAQTLKSNLDSMNQQIQRLEKDIENFPKTQDEHDKFVEKMSSFAESAREQYEKLSNMHNNMTKLYENLGEYFTFDSKAISIEEFFGDLSNFRTLFLEALKENNKRRELEEKTKRAKLAKEKAERERLERQKKKQQLIDMNKEGDETGVMDSLLEALQSGAAFRDRRKRTPRAQDQM
SIO_010081: DIAPH2
subclass of: SO_0000673
so part of: DIAPH2
location: complement(join(1696304..1696314,1697332..1697427,1708055..1708190,1715867..1716031,1732377..1732501,1742955..1743084,1747946..1748185,1753310..1753411,1755087..1755181,1756541..1756642,1774469..1774583,1776850..1777410,1779027..1779131,1779899..1779963,1780437..1780555,1781073..1781189,1782113..1782231,1784011..1784121,1786402..1786513,1787299..1787435,1788480..1788549,1788631..1788705,1789083..1789222,1793240..1793260,1796960..1797064,1797929..1798105,1800361..1800393,1815646..1815762))
location: region:1696304-1815762:-1
so has part: feature:1815646-1815762:-1:exon
so has part: feature:1800361-1800393:-1:exon
so has part: feature:1797929-1798105:-1:exon
so has part: feature:1796960-1797064:-1:exon
so has part: feature:1793240-1793260:-1:exon
so has part: feature:1789083-1789222:-1:exon
so has part: feature:1788631-1788705:-1:exon
so has part: feature:1788480-1788549:-1:exon
so has part: feature:1787299-1787435:-1:exon
so has part: feature:1786402-1786513:-1:exon
so has part: feature:1784011-1784121:-1:exon
so has part: feature:1782113-1782231:-1:exon
so has part: feature:1781073-1781189:-1:exon
so has part: feature:1780437-1780555:-1:exon
so has part: feature:1779899-1779963:-1:exon
so has part: feature:1779027-1779131:-1:exon
so has part: feature:1776850-1777410:-1:exon
so has part: feature:1774469-1774583:-1:exon
so has part: feature:1756541-1756642:-1:exon
so has part: feature:1755087-1755181:-1:exon
so has part: feature:1753310-1753411:-1:exon
so has part: feature:1747946-1748185:-1:exon
so has part: feature:1742955-1743084:-1:exon
so has part: feature:1732377-1732501:-1:exon
so has part: feature:1715867-1716031:-1:exon
so has part: feature:1708055-1708190:-1:exon
so has part: feature:1697332-1697427:-1:exon
so has part: feature:1696304-1696314:-1:exon

XP_015481723.1
type: Protein
SIO_000068: ncbiprotein

position:1696304:-1
position: 1696304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1815646-1815762:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800361-1800393:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1797929-1798105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1796960-1797064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1793240-1793260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1789083-1789222:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1788631-1788705:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1788480-1788549:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1787299-1787435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1786402-1786513:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1784011-1784121:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1782113-1782231:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1781073-1781189:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1780437-1780555:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1779899-1779963:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1779027-1779131:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1776850-1777410:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1774469-1774583:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1756541-1756642:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1755087-1755181:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1753310-1753411:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1747946-1748185:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1742955-1743084:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1732377-1732501:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1715867-1716031:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1708055-1708190:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1697332-1697427:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1696304-1696314:-1:exon

LOC109022623
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC109022623
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1829925..1871732
location: region:1829925-1871732:1
so has part: feature:1829925-1871732:1:exon
subclass of: SO_0000011

109022623
type: Gene
SIO_000068: ncbigene

position:1829925:1
position: 1829925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1871732:1
position: 1871732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1829925-1871732:1:exon

LOC109022623
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC109022623
product: uncharacterized LOC109022623, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004497298.1
SIO_010081: LOC109022623
subclass of: SO_0000673
so part of: LOC109022623
location: join(1829925..1830068,1864596..1864660,1867154..1867236,1867981..1871732)
location: region:1829925-1871732:1
so has part: feature:1829925-1830068:1:exon
so has part: feature:1864596-1864660:1:exon
so has part: feature:1867154-1867236:1:exon
so has part: feature:1867981-1871732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1829925-1830068:1:exon

position:1830068:1
position: 1830068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1864596-1864660:1:exon

position:1864596:1
position: 1864596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864660:1
position: 1864660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1867154-1867236:1:exon

position:1867154:1
position: 1867154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1867236:1
position: 1867236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1867981-1871732:1:exon

position:1867981:1
position: 1867981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109022623
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC109022623
product: uncharacterized LOC109022623, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002001695.2
SIO_010081: LOC109022623
subclass of: SO_0000673
so part of: LOC109022623
location: join(1829925..1830068,1864596..1864660,1867154..1867232,1867981..1871732)
location: region:1829925-1871732:1
so has part: feature:1829925-1830068:1:exon
so has part: feature:1864596-1864660:1:exon
so has part: feature:1867154-1867232:1:exon
so has part: feature:1867981-1871732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1829925-1830068:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1864596-1864660:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1867154-1867232:1:exon

position:1867232:1
position: 1867232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1867981-1871732:1:exon

LOC107203640
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107203640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1882390..1900887
location: region:1882390-1900887:1
so has part: feature:1882390-1900887:1:exon
subclass of: SO_0000011

107203640
type: Gene
SIO_000068: ncbigene

position:1882390:1
position: 1882390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1900887:1
position: 1900887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882390-1900887:1:exon

LOC107203640
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107203640
product: uncharacterized LOC107203640, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_001521287.2
SIO_010081: LOC107203640
subclass of: SO_0000673
so part of: LOC107203640
location: join(1882390..1882570,1892042..1892186,1895861..1896017,1899946..1900887)
location: region:1882390-1900887:1
so has part: feature:1882390-1882570:1:exon
so has part: feature:1892042-1892186:1:exon
so has part: feature:1895861-1896017:1:exon
so has part: feature:1899946-1900887:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1882390-1882570:1:exon

position:1882570:1
position: 1882570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1892042-1892186:1:exon

position:1892042:1
position: 1892042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1892186:1
position: 1892186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1895861-1896017:1:exon

position:1895861:1
position: 1895861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1896017:1
position: 1896017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1899946-1900887:1:exon

position:1899946:1
position: 1899946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107203640
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107203640
product: uncharacterized LOC107203640, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004497327.1
SIO_010081: LOC107203640
subclass of: SO_0000673
so part of: LOC107203640
location: join(1882607..1882696,1892042..1892186,1895861..1896017,1899946..1900887)
location: region:1882607-1900887:1
so has part: feature:1882607-1882696:1:exon
so has part: feature:1892042-1892186:1:exon
so has part: feature:1895861-1896017:1:exon
so has part: feature:1899946-1900887:1:exon

position:1882607:1
position: 1882607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1882607-1882696:1:exon

position:1882696:1
position: 1882696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1892042-1892186:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1895861-1896017:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1899946-1900887:1:exon

LOC109022626
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC109022626
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2061378..2081226
location: region:2061378-2081226:1
so has part: feature:2061378-2081226:1:exon
subclass of: SO_0000011

109022626
type: Gene
SIO_000068: ncbigene

position:2061378:1
position: 2061378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081226:1
position: 2081226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2061378-2081226:1:exon

LOC109022626
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC109022626
product: uncharacterized LOC109022626
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002001697.1
SIO_010081: LOC109022626
subclass of: SO_0000673
so part of: LOC109022626
location: join(2061378..2061455,2062451..2062563,2071523..2071661,2079652..2079693,2080403..2081226)
location: region:2061378-2081226:1
so has part: feature:2061378-2061455:1:exon
so has part: feature:2062451-2062563:1:exon
so has part: feature:2071523-2071661:1:exon
so has part: feature:2079652-2079693:1:exon
so has part: feature:2080403-2081226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2061378-2061455:1:exon

position:2061455:1
position: 2061455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2062451-2062563:1:exon

position:2062451:1
position: 2062451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2062563:1
position: 2062563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2071523-2071661:1:exon

position:2071523:1
position: 2071523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071661:1
position: 2071661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2079652-2079693:1:exon

position:2079652:1
position: 2079652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2079693:1
position: 2079693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2080403-2081226:1:exon

position:2080403:1
position: 2080403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH11X
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2351570..2780930)
location: region:2351570-2780930:-1
so has part: feature:2351570-2780930:-1:exon
subclass of: SO_0000010

107203986
type: Gene
SIO_000068: ncbigene

position:2351570:-1
position: 2351570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2780930:-1
position: 2780930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2351570-2780930:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019006551.2
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2351570..2356154,2476128..2476326,2584264..2584335,2710612..2713098,2735743..2736326,2780441..2780930))
location: region:2351570-2780930:-1
so has part: feature:2780441-2780930:-1:exon
so has part: feature:2735743-2736326:-1:exon
so has part: feature:2710612-2713098:-1:exon
so has part: feature:2584264-2584335:-1:exon
so has part: feature:2476128-2476326:-1:exon
so has part: feature:2351570-2356154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2780441-2780930:-1:exon

position:2780441:-1
position: 2780441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2735743-2736326:-1:exon

position:2735743:-1
position: 2735743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736326:-1
position: 2736326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2710612-2713098:-1:exon

position:2710612:-1
position: 2710612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2713098:-1
position: 2713098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2584264-2584335:-1:exon

position:2584264:-1
position: 2584264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2584335:-1
position: 2584335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2476128-2476326:-1:exon

position:2476128:-1
position: 2476128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2476326:-1
position: 2476326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2351570-2356154:-1:exon

position:2356154:-1
position: 2356154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015626720.3
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2351570..2356154,2476128..2476326,2584264..2584335,2710612..2713098,2716196..2716243,2735743..2736326,2780441..2780930))
location: region:2351570-2780930:-1
so has part: feature:2780441-2780930:-1:exon
so has part: feature:2735743-2736326:-1:exon
so has part: feature:2716196-2716243:-1:exon
so has part: feature:2710612-2713098:-1:exon
so has part: feature:2584264-2584335:-1:exon
so has part: feature:2476128-2476326:-1:exon
so has part: feature:2351570-2356154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2780441-2780930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2735743-2736326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2716196-2716243:-1:exon

position:2716196:-1
position: 2716196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2716243:-1
position: 2716243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2710612-2713098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2584264-2584335:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2476128-2476326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2351570-2356154:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X2
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGILSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHSEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNGSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGASASHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALTQFQQPNPSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQGGPRPQFYNTCERHCTSEDPVKVIPLANFAASHPAPGAASSTTFIHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2355763..2356154,2476128..2476326,2584264..2584335,2710612..2713098,2735743..2736282))
location: region:2355763-2736282:-1
so has part: feature:2735743-2736282:-1:exon
so has part: feature:2710612-2713098:-1:exon
so has part: feature:2584264-2584335:-1:exon
so has part: feature:2476128-2476326:-1:exon
so has part: feature:2355763-2356154:-1:exon

XP_018862096.1
type: Protein
SIO_000068: ncbiprotein

position:2355763:-1
position: 2355763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2736282:-1
position: 2736282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735743-2736282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2710612-2713098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2584264-2584335:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2476128-2476326:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2355763-2356154:-1:exon

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X1
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGILSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHSEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNGSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQHTKEVGRPQTPLKETTLEPWTQPQPQRRVTFHLPDGSQESCSDSGLGDHEPTSGASASHPLPLGFPQDEFYEQASPNSRTEGDGNSDPESTIEVNLQKALAEASENCTQECLILGHSDNCWMPPALTQFQQPNPSLPSFGFQQGWGRGARPEGRHTLGRPLPKDDSDKGQGGPRPQFYNTCERHCTSEDPVKVIPLANFAASHPAPGAASSTTFIHEHQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2355763..2356154,2476128..2476326,2584264..2584335,2710612..2713098,2716196..2716243,2735743..2736282))
location: region:2355763-2736282:-1
so has part: feature:2735743-2736282:-1:exon
so has part: feature:2716196-2716243:-1:exon
so has part: feature:2710612-2713098:-1:exon
so has part: feature:2584264-2584335:-1:exon
so has part: feature:2476128-2476326:-1:exon
so has part: feature:2355763-2356154:-1:exon

XP_015482206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2735743-2736282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2716196-2716243:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2710612-2713098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2584264-2584335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2476128-2476326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2355763-2356154:-1:exon

PCDH11X
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: PCDH11X
product: protocadherin 11 X-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015626722.3
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2700658..2704548,2710612..2713098,2716196..2716243,2735743..2736326,2780441..2780927))
location: region:2700658-2780927:-1
so has part: feature:2780441-2780927:-1:exon
so has part: feature:2735743-2736326:-1:exon
so has part: feature:2716196-2716243:-1:exon
so has part: feature:2710612-2713098:-1:exon
so has part: feature:2700658-2704548:-1:exon

position:2700658:-1
position: 2700658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2780927:-1
position: 2780927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2780441-2780927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2735743-2736326:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2716196-2716243:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2710612-2713098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2700658-2704548:-1:exon

position:2704548:-1
position: 2704548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH11X
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: PCDH11X
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-11 X-linked isoform X3
translation: MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDVPLSSPLQFKLVYKTGDVPLVRVEENTGEIFTAANRIDREKLCAGILSENRCFYEVEVAVLPDEVFRLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLKPKTAPKRTFGSITNDQGQNVFGLDITETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDGGSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQIHFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVNVTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADQNGKVTCFTDHDVPFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAPVFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTAVRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHSEYNFYVPENLPMYGTVGLITVTDADAGDNAAVTLSILNGRDNFIIDPLTGVIRPNITFDREQQGSYTFQVKAVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDNDTGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYTIALVHLFVNETVTNGSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTVILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVTIEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPTFQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGPIHTRQL
SIO_010081: PCDH11X
subclass of: SO_0000673
so part of: PCDH11X
location: complement(join(2704543..2704548,2710612..2713098,2716196..2716243,2735743..2736282))
location: region:2704543-2736282:-1
so has part: feature:2735743-2736282:-1:exon
so has part: feature:2716196-2716243:-1:exon
so has part: feature:2710612-2713098:-1:exon
so has part: feature:2704543-2704548:-1:exon

XP_015482208.1
type: Protein
SIO_000068: ncbiprotein

position:2704543:-1
position: 2704543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2735743-2736282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2716196-2716243:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2710612-2713098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2704543-2704548:-1:exon

LOC107203665
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107203665
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2795253..2800447
location: region:2795253-2800447:1
so has part: feature:2795253-2800447:1:exon
subclass of: SO_0000011

107203665
type: Gene
SIO_000068: ncbigene

position:2795253:1
position: 2795253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2800447:1
position: 2800447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2795253-2800447:1:exon

LOC107203665
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107203665
product: uncharacterized LOC107203665
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_001521298.2
SIO_010081: LOC107203665
subclass of: SO_0000673
so part of: LOC107203665
location: join(2795253..2795443,2796251..2796353,2797969..2798015,2798143..2800447)
location: region:2795253-2800447:1
so has part: feature:2795253-2795443:1:exon
so has part: feature:2796251-2796353:1:exon
so has part: feature:2797969-2798015:1:exon
so has part: feature:2798143-2800447:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2795253-2795443:1:exon

position:2795443:1
position: 2795443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2796251-2796353:1:exon

position:2796251:1
position: 2796251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2796353:1
position: 2796353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2797969-2798015:1:exon

position:2797969:1
position: 2797969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2798015:1
position: 2798015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2798143-2800447:1:exon

position:2798143:1
position: 2798143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107204056
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107204056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2815848..2818883
location: region:2815848-2818883:1
so has part: feature:2815848-2818883:1:exon
subclass of: SO_0000011

107204056
type: Gene
SIO_000068: ncbigene

position:2815848:1
position: 2815848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2818883:1
position: 2818883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2815848-2818883:1:exon

LOC107204056
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107204056
product: uncharacterized LOC107204056
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001521448.1
SIO_010081: LOC107204056
subclass of: SO_0000673
so part of: LOC107204056
location: join(2815848..2816012,2818632..2818883)
location: region:2815848-2818883:1
so has part: feature:2815848-2816012:1:exon
so has part: feature:2818632-2818883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2815848-2816012:1:exon

position:2816012:1
position: 2816012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2818632-2818883:1:exon

position:2818632:1
position: 2818632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLHL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3695694..3732149)
location: region:3695694-3732149:-1
so has part: feature:3695694-3732149:-1:exon
subclass of: SO_0000010

107204020
type: Gene
SIO_000068: ncbigene

position:3695694:-1
position: 3695694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3732149:-1
position: 3732149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3695694-3732149:-1:exon

KLHL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: KLHL4
product: kelch like family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015626772.3
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3695694..3697323,3698007..3698178,3699211..3699423,3701888..3702050,3703913..3704137,3707065..3707251,3708291..3708503,3711323..3711519,3712023..3712159,3712599..3712769,3730988..3732149))
location: region:3695694-3732149:-1
so has part: feature:3730988-3732149:-1:exon
so has part: feature:3712599-3712769:-1:exon
so has part: feature:3712023-3712159:-1:exon
so has part: feature:3711323-3711519:-1:exon
so has part: feature:3708291-3708503:-1:exon
so has part: feature:3707065-3707251:-1:exon
so has part: feature:3703913-3704137:-1:exon
so has part: feature:3701888-3702050:-1:exon
so has part: feature:3699211-3699423:-1:exon
so has part: feature:3698007-3698178:-1:exon
so has part: feature:3695694-3697323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3730988-3732149:-1:exon

position:3730988:-1
position: 3730988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3712599-3712769:-1:exon

position:3712599:-1
position: 3712599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3712769:-1
position: 3712769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3712023-3712159:-1:exon

position:3712023:-1
position: 3712023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3712159:-1
position: 3712159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3711323-3711519:-1:exon

position:3711323:-1
position: 3711323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3711519:-1
position: 3711519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3708291-3708503:-1:exon

position:3708291:-1
position: 3708291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3708503:-1
position: 3708503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3707065-3707251:-1:exon

position:3707065:-1
position: 3707065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3707251:-1
position: 3707251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3703913-3704137:-1:exon

position:3703913:-1
position: 3703913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3704137:-1
position: 3704137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3701888-3702050:-1:exon

position:3701888:-1
position: 3701888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3702050:-1
position: 3702050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3699211-3699423:-1:exon

position:3699211:-1
position: 3699211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3699423:-1
position: 3699423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3698007-3698178:-1:exon

position:3698007:-1
position: 3698007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3698178:-1
position: 3698178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3695694-3697323:-1:exon

position:3697323:-1
position: 3697323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: KLHL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 4
translation: MSVSGKKEFDVKQILRLRWRWFSHPSQGSAGSGGCHQQEGFEHRGTPVQNRLKSHSRDRNGLKKNSSPVHHNILAPVPGPTPVHHRSIHSWHQQNLIEQLRASEDIPKNSTEENSAKEDSSKTSQELQMITEQNADESAERLSTTSSSLGMSTNGSDEYFQSTNHAEQTFRKMENYLQQKQLCDVLLIAGDQKIPAHRLVLSAVSDYFAAMFTSDVREAKQEEIKMEGVDPEALKALVRYAYTGILELKEDTIESLLAAACLLQLSQVIEVCCNFLMKQLHPSNCLGIRSFGDAQGCSELLKVAHTYTMEHFIEVIKNQEFLLLPANEIAKLLSSDDINVPDEEAIFQALMMWVRHDLQNRQRDLGMLLSYIRLPLLPPQLLADLENSPMFADDLECQKLLMEAMKYHLLPERRSMMQSPRTKPRKSTVGALYAVGGMDATKGTTTIEKYDLRTNSWIQIGTMNGRRLQFGVAVIDNKLYIVGGRDGLKTSNIVECFNPVTKAWTVMPPMSTHRHGLGVAMLEGPMYAVGGHDGWSYLNTVERWDPQARQWNYVASMSTPRSTVGVAALNSKLYAVGGRDGSSCLKSMECFDPHTNKWSLCASMSKRRGGVGVATYNGFLYAVGGHDAPASNHCSRLSDCVERYDPKTDAWTTVAPLSVPRDAVGICPLGDRLYAVGGYDGHSYLDTVESYDAQNNEWTEEVPVNIGRAGACVVVVKLP
SIO_010081: KLHL4
subclass of: SO_0000673
so part of: KLHL4
location: complement(join(3697264..3697323,3698007..3698178,3699211..3699423,3701888..3702050,3703913..3704137,3707065..3707251,3708291..3708503,3711323..3711519,3712023..3712159,3712599..3712769,3730988..3731409))
location: region:3697264-3731409:-1
so has part: feature:3730988-3731409:-1:exon
so has part: feature:3712599-3712769:-1:exon
so has part: feature:3712023-3712159:-1:exon
so has part: feature:3711323-3711519:-1:exon
so has part: feature:3708291-3708503:-1:exon
so has part: feature:3707065-3707251:-1:exon
so has part: feature:3703913-3704137:-1:exon
so has part: feature:3701888-3702050:-1:exon
so has part: feature:3699211-3699423:-1:exon
so has part: feature:3698007-3698178:-1:exon
so has part: feature:3697264-3697323:-1:exon

XP_015482258.1
type: Protein
SIO_000068: ncbiprotein

position:3697264:-1
position: 3697264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3731409:-1
position: 3731409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3730988-3731409:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3712599-3712769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3712023-3712159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3711323-3711519:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3708291-3708503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3707065-3707251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3703913-3704137:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3701888-3702050:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3699211-3699423:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3698007-3698178:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3697264-3697323:-1:exon

DACH2
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3883339..4129689)
location: region:3883339-4129689:-1
so has part: feature:3883339-4129689:-1:exon
subclass of: SO_0000010

107203965
type: Gene
SIO_000068: ncbigene

position:3883339:-1
position: 3883339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4129689:-1
position: 4129689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3883339-4129689:-1:exon

DACH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: DACH2
product: dachshund family transcription factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015626682.1
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3883339..3884226,3892636..3892701,3895687..3895830,3897192..3897339,3897861..3898006,3927608..3927688,3929294..3929429,3940310..3940482,3943820..3943975,3968679..3968810,4008000..4008115,4129278..4129689))
location: region:3883339-4129689:-1
so has part: feature:4129278-4129689:-1:exon
so has part: feature:4008000-4008115:-1:exon
so has part: feature:3968679-3968810:-1:exon
so has part: feature:3943820-3943975:-1:exon
so has part: feature:3940310-3940482:-1:exon
so has part: feature:3929294-3929429:-1:exon
so has part: feature:3927608-3927688:-1:exon
so has part: feature:3897861-3898006:-1:exon
so has part: feature:3897192-3897339:-1:exon
so has part: feature:3895687-3895830:-1:exon
so has part: feature:3892636-3892701:-1:exon
so has part: feature:3883339-3884226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4129278-4129689:-1:exon

position:4129278:-1
position: 4129278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4008000-4008115:-1:exon

position:4008000:-1
position: 4008000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4008115:-1
position: 4008115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3968679-3968810:-1:exon

position:3968679:-1
position: 3968679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3968810:-1
position: 3968810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3943820-3943975:-1:exon

position:3943820:-1
position: 3943820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3943975:-1
position: 3943975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3940310-3940482:-1:exon

position:3940310:-1
position: 3940310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3940482:-1
position: 3940482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3929294-3929429:-1:exon

position:3929294:-1
position: 3929294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3929429:-1
position: 3929429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3927608-3927688:-1:exon

position:3927608:-1
position: 3927608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3927688:-1
position: 3927688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3897861-3898006:-1:exon

position:3897861:-1
position: 3897861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3898006:-1
position: 3898006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3897192-3897339:-1:exon

position:3897192:-1
position: 3897192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3897339:-1
position: 3897339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3895687-3895830:-1:exon

position:3895687:-1
position: 3895687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3895830:-1
position: 3895830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3892636-3892701:-1:exon

position:3892636:-1
position: 3892636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3892701:-1
position: 3892701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3883339-3884226:-1:exon

position:3884226:-1
position: 3884226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DACH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: DACH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dachshund homolog 2
translation: MVDLHGVKVASFLVEGQELICLPQVFDLFLKHLVGGLHTVYTKLKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLYNDCTNASSRPGRPPKRSLGVAIQENARLLPHGVPGLLSPGLISPTGLTAAAMAEAMKLQKMKLMAMNSLHGSGSQNGTESENEELNSNAGGSESSWDKDKLQSPITTGSQHSIGHPTLSGQSSLGSAHPLSPLQQNHLLTNRIDLPFMMMPHPLLPVSLPPASVAMAMNQMNHLNTIANMAAAAQMHSPLSRAGASVIKERIQDSPSPAPSLEDSQRPGSHASSHPSSSVSSSPSQLDNTPDRIAMLTNSREGELIDQETGNSLKKIQKEKEEVQIAIPIMKPTLDKVQLAGQALPPGFPAPFLFADGLSSVETLLTNIQGLLKVAVDNARVQEKQIQQEKKELKMELCRERELRESLERQLTAELQSRATIQKRLKKEKKAKRKLQEALEFESKRREQVEQALKQATSGDGLRMLNDAGIPDMEIEHNGTQHDSAAMQENRTYIKPTIMY
SIO_010081: DACH2
subclass of: SO_0000673
so part of: DACH2
location: complement(join(3884189..3884226,3892636..3892701,3895687..3895830,3897192..3897339,3897861..3898006,3927608..3927688,3929294..3929429,3940310..3940482,3943820..3943975,3968679..3968810,4008000..4008115,4129278..4129558))
location: region:3884189-4129558:-1
so has part: feature:4129278-4129558:-1:exon
so has part: feature:4008000-4008115:-1:exon
so has part: feature:3968679-3968810:-1:exon
so has part: feature:3943820-3943975:-1:exon
so has part: feature:3940310-3940482:-1:exon
so has part: feature:3929294-3929429:-1:exon
so has part: feature:3927608-3927688:-1:exon
so has part: feature:3897861-3898006:-1:exon
so has part: feature:3897192-3897339:-1:exon
so has part: feature:3895687-3895830:-1:exon
so has part: feature:3892636-3892701:-1:exon
so has part: feature:3884189-3884226:-1:exon

XP_015482168.1
type: Protein
SIO_000068: ncbiprotein

position:3884189:-1
position: 3884189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4129558:-1
position: 4129558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4129278-4129558:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4008000-4008115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3968679-3968810:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3943820-3943975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3940310-3940482:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3929294-3929429:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3927608-3927688:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3897861-3898006:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3897192-3897339:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3895687-3895830:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3892636-3892701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3884189-3884226:-1:exon

LOC107203648
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107203648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4133686..4146880)
location: region:4133686-4146880:-1
so has part: feature:4133686-4146880:-1:exon
subclass of: SO_0000011

107203648
type: Gene
SIO_000068: ncbigene

position:4133686:-1
position: 4133686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4146880:-1
position: 4146880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4133686-4146880:-1:exon

LOC107203648
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107203648
product: uncharacterized LOC107203648, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004497326.1
SIO_010081: LOC107203648
subclass of: SO_0000673
so part of: LOC107203648
location: complement(join(4133686..4134291,4141890..4142061,4143208..4143357,4145876..4146880))
location: region:4133686-4146880:-1
so has part: feature:4145876-4146880:-1:exon
so has part: feature:4143208-4143357:-1:exon
so has part: feature:4141890-4142061:-1:exon
so has part: feature:4133686-4134291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4145876-4146880:-1:exon

position:4145876:-1
position: 4145876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4143208-4143357:-1:exon

position:4143208:-1
position: 4143208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4143357:-1
position: 4143357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4141890-4142061:-1:exon

position:4141890:-1
position: 4141890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4142061:-1
position: 4142061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4133686-4134291:-1:exon

position:4134291:-1
position: 4134291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107203648
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107203648
product: uncharacterized LOC107203648, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001521294.2
SIO_010081: LOC107203648
subclass of: SO_0000673
so part of: LOC107203648
location: complement(join(4133686..4134291,4141890..4142061,4143208..4146880))
location: region:4133686-4146880:-1
so has part: feature:4143208-4146880:-1:exon
so has part: feature:4141890-4142061:-1:exon
so has part: feature:4133686-4134291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4143208-4146880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4141890-4142061:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4133686-4134291:-1:exon

CHM
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: CHM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4147530..4206725
location: region:4147530-4206725:1
so has part: feature:4147530-4206725:1:exon
subclass of: SO_0000010

107203968
type: Gene
SIO_000068: ncbigene

position:4147530:1
position: 4147530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4206725:1
position: 4206725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4147530-4206725:1:exon

CHM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CHM
product: CHM Rab escort protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019006552.2
SIO_010081: CHM
subclass of: SO_0000673
so part of: CHM
location: join(4147530..4147603,4157892..4157958,4163591..4163663,4164813..4164937,4168617..4169064,4170188..4170304,4170960..4171080,4173303..4173528,4183498..4183575,4188399..4188503,4189252..4189315,4189911..4190007,4192239..4192331,4194757..4194923,4199125..4199293,4201953..4206725)
location: region:4147530-4206725:1
so has part: feature:4147530-4147603:1:exon
so has part: feature:4157892-4157958:1:exon
so has part: feature:4163591-4163663:1:exon
so has part: feature:4164813-4164937:1:exon
so has part: feature:4168617-4169064:1:exon
so has part: feature:4170188-4170304:1:exon
so has part: feature:4170960-4171080:1:exon
so has part: feature:4173303-4173528:1:exon
so has part: feature:4183498-4183575:1:exon
so has part: feature:4188399-4188503:1:exon
so has part: feature:4189252-4189315:1:exon
so has part: feature:4189911-4190007:1:exon
so has part: feature:4192239-4192331:1:exon
so has part: feature:4194757-4194923:1:exon
so has part: feature:4199125-4199293:1:exon
so has part: feature:4201953-4206725:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4147530-4147603:1:exon

position:4147603:1
position: 4147603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4157892-4157958:1:exon

position:4157892:1
position: 4157892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4157958:1
position: 4157958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4163591-4163663:1:exon

position:4163591:1
position: 4163591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4163663:1
position: 4163663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4164813-4164937:1:exon

position:4164813:1
position: 4164813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4164937:1
position: 4164937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4168617-4169064:1:exon

position:4168617:1
position: 4168617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4169064:1
position: 4169064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4170188-4170304:1:exon

position:4170188:1
position: 4170188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4170304:1
position: 4170304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4170960-4171080:1:exon

position:4170960:1
position: 4170960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4171080:1
position: 4171080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4173303-4173528:1:exon

position:4173303:1
position: 4173303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4173528:1
position: 4173528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4183498-4183575:1:exon

position:4183498:1
position: 4183498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4183575:1
position: 4183575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4188399-4188503:1:exon

position:4188399:1
position: 4188399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4188503:1
position: 4188503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4189252-4189315:1:exon

position:4189252:1
position: 4189252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4189315:1
position: 4189315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4189911-4190007:1:exon

position:4189911:1
position: 4189911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4190007:1
position: 4190007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4192239-4192331:1:exon

position:4192239:1
position: 4192239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4192331:1
position: 4192331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4194757-4194923:1:exon

position:4194757:1
position: 4194757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4194923:1
position: 4194923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4199125-4199293:1:exon

position:4199125:1
position: 4199125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4199293:1
position: 4199293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4201953-4206725:1:exon

position:4201953:1
position: 4201953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: CHM
product: CHM Rab escort protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_015626688.1
SIO_010081: CHM
subclass of: SO_0000673
so part of: CHM
location: join(4147530..4147603,4157892..4157958,4163591..4163663,4164813..4164937,4168617..4169064,4170188..4170304,4170960..4171080,4173303..4173528,4183498..4183575,4188399..4188503,4189252..4189315,4189911..4190007,4192239..4192331,4194757..4194923,4199125..4201163)
location: region:4147530-4201163:1
so has part: feature:4147530-4147603:1:exon
so has part: feature:4157892-4157958:1:exon
so has part: feature:4163591-4163663:1:exon
so has part: feature:4164813-4164937:1:exon
so has part: feature:4168617-4169064:1:exon
so has part: feature:4170188-4170304:1:exon
so has part: feature:4170960-4171080:1:exon
so has part: feature:4173303-4173528:1:exon
so has part: feature:4183498-4183575:1:exon
so has part: feature:4188399-4188503:1:exon
so has part: feature:4189252-4189315:1:exon
so has part: feature:4189911-4190007:1:exon
so has part: feature:4192239-4192331:1:exon
so has part: feature:4194757-4194923:1:exon
so has part: feature:4199125-4201163:1:exon

position:4201163:1
position: 4201163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4147530-4147603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4157892-4157958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4163591-4163663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4164813-4164937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4168617-4169064:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4170188-4170304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4170960-4171080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4173303-4173528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4183498-4183575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4188399-4188503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4189252-4189315:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4189911-4190007:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4192239-4192331:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4194757-4194923:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4199125-4201163:1:exon

CHM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CHM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab proteins geranylgeranyltransferase component A 1 isoform X2
translation: MADNLPTEFDVVVVGTGLPESIIAAACARSGQRVLHVDSRNYYGGNWASFSFSGLLSWIKENQQKTDLSDECDDWRKLILEDEEAIPLSSKDKTIQHVEDFCFGDQDSAEGVEEAGALPKLPVFGAPAAQGVSPGSEKESPAVEGISLGSEESPAAEGISPGSEEENPAVESPREEPLTPEPEQALSTEAAPGDGAGAAPGSGAAPSTASGESAPEPAETEAAPSESAAQEPKKITYSQIVREGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNATRVLAFREGKVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCLDYEEHPEEYREYESSTFAQFLQTRKLTPSLQHFILHSIAMVSETESSTLEGLQATKKFLQCLGRYGNTPFLFPLYGQGEIPQCFCRLCAVFGGIYCLRHAVRCLVLDRASGRCKAIVDHFGQRISANYFIVEDSYLSESTCTNVCYRQISRAVLITDQSVLNTDSEQQVSILTVPPLEEGRAAVRVIELCSSTMTCMKDTYLVHLTCPSTKTAREDLEPVVQKLFNLNTAKETENEELEKPRVLWAVYFNMRDSSGVEKSSYAGLPSNVYVCSGPDSALGNDCAVKQAETIFREMFPTEEFCPPPPNPEDIIYDEDEIEPEEAGLNNSPETKPDSPAEENSSGGLLVVTAPVEAFSAMKLLRLLFLVMMMLRTI
SIO_010081: CHM
subclass of: SO_0000673
so part of: CHM
location: join(4147555..4147603,4157892..4157958,4163591..4163663,4164813..4164937,4168617..4169064,4170188..4170304,4170960..4171080,4173303..4173528,4183498..4183575,4188399..4188503,4189252..4189315,4189911..4190007,4192239..4192331,4194757..4194923,4199125..4199293,4201953..4202047)
location: region:4147555-4202047:1
so has part: feature:4147555-4147603:1:exon
so has part: feature:4157892-4157958:1:exon
so has part: feature:4163591-4163663:1:exon
so has part: feature:4164813-4164937:1:exon
so has part: feature:4168617-4169064:1:exon
so has part: feature:4170188-4170304:1:exon
so has part: feature:4170960-4171080:1:exon
so has part: feature:4173303-4173528:1:exon
so has part: feature:4183498-4183575:1:exon
so has part: feature:4188399-4188503:1:exon
so has part: feature:4189252-4189315:1:exon
so has part: feature:4189911-4190007:1:exon
so has part: feature:4192239-4192331:1:exon
so has part: feature:4194757-4194923:1:exon
so has part: feature:4199125-4199293:1:exon
so has part: feature:4201953-4202047:1:exon

XP_018862097.1
type: Protein
SIO_000068: ncbiprotein

position:4147555:1
position: 4147555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4202047:1
position: 4202047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4147555-4147603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4157892-4157958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4163591-4163663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4164813-4164937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4168617-4169064:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4170188-4170304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4170960-4171080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4173303-4173528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4183498-4183575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4188399-4188503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4189252-4189315:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4189911-4190007:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4192239-4192331:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4194757-4194923:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4199125-4199293:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4201953-4202047:1:exon

CHM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: CHM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab proteins geranylgeranyltransferase component A 1 isoform X1
translation: MADNLPTEFDVVVVGTGLPESIIAAACARSGQRVLHVDSRNYYGGNWASFSFSGLLSWIKENQQKTDLSDECDDWRKLILEDEEAIPLSSKDKTIQHVEDFCFGDQDSAEGVEEAGALPKLPVFGAPAAQGVSPGSEKESPAVEGISLGSEESPAAEGISPGSEEENPAVESPREEPLTPEPEQALSTEAAPGDGAGAAPGSGAAPSTASGESAPEPAETEAAPSESAAQEPKKITYSQIVREGRRFNIDLVSKLLYSRGLLIDLLIKSNVSRYAEFKNATRVLAFREGKVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCLDYEEHPEEYREYESSTFAQFLQTRKLTPSLQHFILHSIAMVSETESSTLEGLQATKKFLQCLGRYGNTPFLFPLYGQGEIPQCFCRLCAVFGGIYCLRHAVRCLVLDRASGRCKAIVDHFGQRISANYFIVEDSYLSESTCTNVCYRQISRAVLITDQSVLNTDSEQQVSILTVPPLEEGRAAVRVIELCSSTMTCMKDTYLVHLTCPSTKTAREDLEPVVQKLFNLNTAKETENEELEKPRVLWAVYFNMRDSSGVEKSSYAGLPSNVYVCSGPDSALGNDCAVKQAETIFREMFPTEEFCPPPPNPEDIIYDEDEIEPEEAGLNNSPETKPDSPAEENSSGGGAAVIKEE
SIO_010081: CHM
subclass of: SO_0000673
so part of: CHM
location: join(4147555..4147603,4157892..4157958,4163591..4163663,4164813..4164937,4168617..4169064,4170188..4170304,4170960..4171080,4173303..4173528,4183498..4183575,4188399..4188503,4189252..4189315,4189911..4190007,4192239..4192331,4194757..4194923,4199125..4199322)
location: region:4147555-4199322:1
so has part: feature:4147555-4147603:1:exon
so has part: feature:4157892-4157958:1:exon
so has part: feature:4163591-4163663:1:exon
so has part: feature:4164813-4164937:1:exon
so has part: feature:4168617-4169064:1:exon
so has part: feature:4170188-4170304:1:exon
so has part: feature:4170960-4171080:1:exon
so has part: feature:4173303-4173528:1:exon
so has part: feature:4183498-4183575:1:exon
so has part: feature:4188399-4188503:1:exon
so has part: feature:4189252-4189315:1:exon
so has part: feature:4189911-4190007:1:exon
so has part: feature:4192239-4192331:1:exon
so has part: feature:4194757-4194923:1:exon
so has part: feature:4199125-4199322:1:exon

XP_015482174.1
type: Protein
SIO_000068: ncbiprotein

position:4199322:1
position: 4199322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4147555-4147603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4157892-4157958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4163591-4163663:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4164813-4164937:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4168617-4169064:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4170188-4170304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4170960-4171080:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4173303-4173528:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4183498-4183575:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4188399-4188503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4189252-4189315:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4189911-4190007:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4192239-4192331:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4194757-4194923:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4199125-4199322:1:exon

POF1B
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: POF1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4239577..4257224
location: region:4239577-4257224:1
so has part: feature:4239577-4257224:1:exon
subclass of: SO_0000010

107203920
type: Gene
SIO_000068: ncbigene

position:4239577:1
position: 4239577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4257224:1
position: 4257224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4239577-4257224:1:exon

POF1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: POF1B
product: POF1B actin binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015626538.3
SIO_010081: POF1B
subclass of: SO_0000673
so part of: POF1B
location: join(4239577..4239924,4245252..4245290,4245676..4245777,4247178..4247360,4248302..4248432,4249394..4249421,4250233..4250307,4252455..4252547,4253261..4253374,4253529..4253681,4253797..4253907,4254523..4254651,4254935..4255008,4255095..4255209,4256247..4257224)
location: region:4239577-4257224:1
so has part: feature:4239577-4239924:1:exon
so has part: feature:4245252-4245290:1:exon
so has part: feature:4245676-4245777:1:exon
so has part: feature:4247178-4247360:1:exon
so has part: feature:4248302-4248432:1:exon
so has part: feature:4249394-4249421:1:exon
so has part: feature:4250233-4250307:1:exon
so has part: feature:4252455-4252547:1:exon
so has part: feature:4253261-4253374:1:exon
so has part: feature:4253529-4253681:1:exon
so has part: feature:4253797-4253907:1:exon
so has part: feature:4254523-4254651:1:exon
so has part: feature:4254935-4255008:1:exon
so has part: feature:4255095-4255209:1:exon
so has part: feature:4256247-4257224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4239577-4239924:1:exon

position:4239924:1
position: 4239924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4245252-4245290:1:exon

position:4245252:1
position: 4245252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4245290:1
position: 4245290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4245676-4245777:1:exon

position:4245676:1
position: 4245676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4245777:1
position: 4245777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4247178-4247360:1:exon

position:4247178:1
position: 4247178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4247360:1
position: 4247360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4248302-4248432:1:exon

position:4248302:1
position: 4248302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4248432:1
position: 4248432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4249394-4249421:1:exon

position:4249394:1
position: 4249394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4249421:1
position: 4249421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4250233-4250307:1:exon

position:4250233:1
position: 4250233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4250307:1
position: 4250307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4252455-4252547:1:exon

position:4252455:1
position: 4252455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4252547:1
position: 4252547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4253261-4253374:1:exon

position:4253261:1
position: 4253261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4253374:1
position: 4253374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4253529-4253681:1:exon

position:4253529:1
position: 4253529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4253681:1
position: 4253681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4253797-4253907:1:exon

position:4253797:1
position: 4253797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4253907:1
position: 4253907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4254523-4254651:1:exon

position:4254523:1
position: 4254523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4254651:1
position: 4254651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4254935-4255008:1:exon

position:4254935:1
position: 4254935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4255008:1
position: 4255008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4255095-4255209:1:exon

position:4255095:1
position: 4255095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4255209:1
position: 4255209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4256247-4257224:1:exon

position:4256247:1
position: 4256247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POF1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: POF1B
product: POF1B actin binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015626537.3
SIO_010081: POF1B
subclass of: SO_0000673
so part of: POF1B
location: join(4239577..4239924,4245252..4245290,4245676..4245777,4247178..4247360,4248302..4248432,4249394..4249421,4250233..4250307,4252455..4252547,4253261..4253374,4253529..4253681,4253797..4253907,4254523..4254651,4254935..4255008,4255095..4255974)
location: region:4239577-4255974:1
so has part: feature:4239577-4239924:1:exon
so has part: feature:4245252-4245290:1:exon
so has part: feature:4245676-4245777:1:exon
so has part: feature:4247178-4247360:1:exon
so has part: feature:4248302-4248432:1:exon
so has part: feature:4249394-4249421:1:exon
so has part: feature:4250233-4250307:1:exon
so has part: feature:4252455-4252547:1:exon
so has part: feature:4253261-4253374:1:exon
so has part: feature:4253529-4253681:1:exon
so has part: feature:4253797-4253907:1:exon
so has part: feature:4254523-4254651:1:exon
so has part: feature:4254935-4255008:1:exon
so has part: feature:4255095-4255974:1:exon

position:4255974:1
position: 4255974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4239577-4239924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4245252-4245290:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4245676-4245777:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4247178-4247360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4248302-4248432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4249394-4249421:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4250233-4250307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4252455-4252547:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4253261-4253374:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4253529-4253681:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4253797-4253907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4254523-4254651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4254935-4255008:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4255095-4255974:1:exon

POF1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: POF1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein POF1B isoform X2
translation: MFGVQQQLQPPALPPHLSQQQHHYYRRQQHYSTLPVRRACPEPPPCPEPPPCPEPPRPLPCLDPAPHQQQDGAVAYDRVRTYGPGCRRVSTSCSSRAASPLDCGHGCDPPQGTIRRIIIENPDQEPLSPFLRGASFSPGNNVIYEKTIRKYELLNPLQERQFQLCPPEQCVPCPPCPPPAVTQQCQQTQTGSPCELCPGPGSDECRVQPVRRSTVPPELVSCPQDSPEQLDCRFFGELLAELHRKSTDLYSCLLQHVEKIGTRNHDIEFTCQTEDIEELIPKGLSEATKQQIRYLLQMRATSDKSLRLVLSTFKNLREELCHLQDDLGKLETDNVLLKKDLAFKDSQVKEYETMLASLRENNRQQQQGLRDSTARCRSLEEQLLSLRLSEGDKDCQLKELEYSKRALEQEIQSLKLQSCSSPTLQTTTDELSSRYVEMINNLREDKDREIRSLRSQLCQFQQDITRREGSNSDLQMRLHELTSLLEDKEAFIKQQQEELFRLKHEKLSGSQSPGVTAIITKKYRNQYPILGLLSDDYKVTSPVNKSQTIVIERTGEIWKHE
SIO_010081: POF1B
subclass of: SO_0000673
so part of: POF1B
location: join(4239592..4239924,4245252..4245290,4245676..4245777,4247178..4247360,4248302..4248432,4249394..4249421,4250233..4250307,4252455..4252547,4253261..4253374,4253529..4253681,4253797..4253907,4254523..4254651,4254935..4255008,4255095..4255209,4256247..4256252)
location: region:4239592-4256252:1
so has part: feature:4239592-4239924:1:exon
so has part: feature:4245252-4245290:1:exon
so has part: feature:4245676-4245777:1:exon
so has part: feature:4247178-4247360:1:exon
so has part: feature:4248302-4248432:1:exon
so has part: feature:4249394-4249421:1:exon
so has part: feature:4250233-4250307:1:exon
so has part: feature:4252455-4252547:1:exon
so has part: feature:4253261-4253374:1:exon
so has part: feature:4253529-4253681:1:exon
so has part: feature:4253797-4253907:1:exon
so has part: feature:4254523-4254651:1:exon
so has part: feature:4254935-4255008:1:exon
so has part: feature:4255095-4255209:1:exon
so has part: feature:4256247-4256252:1:exon

XP_015482024.1
type: Protein
SIO_000068: ncbiprotein

position:4239592:1
position: 4239592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4256252:1
position: 4256252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4239592-4239924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4245252-4245290:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4245676-4245777:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4247178-4247360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4248302-4248432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4249394-4249421:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4250233-4250307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4252455-4252547:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4253261-4253374:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4253529-4253681:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4253797-4253907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4254523-4254651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4254935-4255008:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4255095-4255209:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4256247-4256252:1:exon

POF1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: POF1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein POF1B isoform X1
translation: MFGVQQQLQPPALPPHLSQQQHHYYRRQQHYSTLPVRRACPEPPPCPEPPPCPEPPRPLPCLDPAPHQQQDGAVAYDRVRTYGPGCRRVSTSCSSRAASPLDCGHGCDPPQGTIRRIIIENPDQEPLSPFLRGASFSPGNNVIYEKTIRKYELLNPLQERQFQLCPPEQCVPCPPCPPPAVTQQCQQTQTGSPCELCPGPGSDECRVQPVRRSTVPPELVSCPQDSPEQLDCRFFGELLAELHRKSTDLYSCLLQHVEKIGTRNHDIEFTCQTEDIEELIPKGLSEATKQQIRYLLQMRATSDKSLRLVLSTFKNLREELCHLQDDLGKLETDNVLLKKDLAFKDSQVKEYETMLASLRENNRQQQQGLRDSTARCRSLEEQLLSLRLSEGDKDCQLKELEYSKRALEQEIQSLKLQSCSSPTLQTTTDELSSRYVEMINNLREDKDREIRSLRSQLCQFQQDITRREGSNSDLQMRLHELTSLLEDKEAFIKQQQEELFRLKHEKLSGSQSPGVTAIITKKYRNQYPILGLLSDDYKVTSPVNKSQTIVIERTGEIWKHVSLPGHGLFPLHSLSVQFNFKASTTQTESSEMPSW
SIO_010081: POF1B
subclass of: SO_0000673
so part of: POF1B
location: join(4239592..4239924,4245252..4245290,4245676..4245777,4247178..4247360,4248302..4248432,4249394..4249421,4250233..4250307,4252455..4252547,4253261..4253374,4253529..4253681,4253797..4253907,4254523..4254651,4254935..4255008,4255095..4255317)
location: region:4239592-4255317:1
so has part: feature:4239592-4239924:1:exon
so has part: feature:4245252-4245290:1:exon
so has part: feature:4245676-4245777:1:exon
so has part: feature:4247178-4247360:1:exon
so has part: feature:4248302-4248432:1:exon
so has part: feature:4249394-4249421:1:exon
so has part: feature:4250233-4250307:1:exon
so has part: feature:4252455-4252547:1:exon
so has part: feature:4253261-4253374:1:exon
so has part: feature:4253529-4253681:1:exon
so has part: feature:4253797-4253907:1:exon
so has part: feature:4254523-4254651:1:exon
so has part: feature:4254935-4255008:1:exon
so has part: feature:4255095-4255317:1:exon

XP_015482023.1
type: Protein
SIO_000068: ncbiprotein

position:4255317:1
position: 4255317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4239592-4239924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4245252-4245290:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4245676-4245777:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4247178-4247360:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4248302-4248432:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4249394-4249421:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4250233-4250307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4252455-4252547:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4253261-4253374:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4253529-4253681:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4253797-4253907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4254523-4254651:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4254935-4255008:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4255095-4255317:1:exon

ZNF711
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4251484..4275620)
location: region:4251484-4275620:-1
so has part: feature:4251484-4275620:-1:exon
subclass of: SO_0000010

107203918
type: Gene
SIO_000068: ncbigene

position:4251484:-1
position: 4251484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4275620:-1
position: 4275620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4251484-4275620:-1:exon

ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZNF711
product: zinc finger protein 711, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_033514035.1
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4251484..4254049,4256387..4256474,4257797..4257870,4258843..4258920,4259263..4259641,4259731..4259769,4259860..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275620))
location: region:4251484-4275620:-1
so has part: feature:4275446-4275620:-1:exon
so has part: feature:4274171-4274701:-1:exon
so has part: feature:4266873-4267031:-1:exon
so has part: feature:4265934-4266080:-1:exon
so has part: feature:4265221-4265358:-1:exon
so has part: feature:4264035-4264082:-1:exon
so has part: feature:4263375-4263518:-1:exon
so has part: feature:4259860-4262912:-1:exon
so has part: feature:4259731-4259769:-1:exon
so has part: feature:4259263-4259641:-1:exon
so has part: feature:4258843-4258920:-1:exon
so has part: feature:4257797-4257870:-1:exon
so has part: feature:4256387-4256474:-1:exon
so has part: feature:4251484-4254049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4275446-4275620:-1:exon

position:4275446:-1
position: 4275446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
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ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZNF711
product: zinc finger protein 711, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_033514033.1
SIO_010081: ZNF711
subclass of: SO_0000673
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location: region:4251484-4275620:-1
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urn:…
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SIO_000300: 9
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SIO_000300: 10
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SIO_000628: feature:4257797-4257870:-1:exon

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SIO_000628: feature:4256387-4256474:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4251484-4254049:-1:exon

ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZNF711
product: zinc finger protein 711, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033514036.1
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4251484..4252844,4256387..4256474,4257797..4257870,4258843..4258920,4259263..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275620))
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urn:…
SIO_000300: 1
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urn:…
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SIO_000628: feature:4257797-4257870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4256387-4256474:-1:exon

urn:…
SIO_000300: 12
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position:4252844:-1
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reference: sequence
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ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZNF711
product: zinc finger protein 711, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_033514032.1
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4251484..4252917,4256387..4256474,4257797..4257870,4258843..4258920,4259263..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275620))
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urn:…
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SIO_000300: 10
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SIO_000300: 11
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SIO_000300: 12
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position:4252917:-1
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reference: sequence
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ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZNF711
product: zinc finger protein 711, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_033514034.1
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4251484..4252917,4253694..4254049,4256387..4256474,4257797..4257870,4258843..4258920,4259263..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275620))
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urn:…
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urn:…
SIO_000300: 13
SIO_000628: feature:4251484-4252917:-1:exon

ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZNF711
product: zinc finger protein 711, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_015626534.2
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4251484..4254049,4256387..4256474,4257797..4257870,4258843..4258920,4259263..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275620))
location: region:4251484-4275620:-1
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urn:…
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urn:…
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SIO_000628: feature:4251484-4254049:-1:exon

ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZNF711
product: zinc finger protein 711, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015626535.2
SIO_010081: ZNF711
subclass of: SO_0000673
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urn:…
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ZNF711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: ZNF711
product: zinc finger protein 711, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_015626536.2
SIO_010081: ZNF711
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urn:…
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urn:…
SIO_000300: 7
SIO_000628: feature:4263375-4263518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4259263-4262912:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4258843-4258920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4257797-4257870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4256387-4256474:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4251484-4254049:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X2
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTSDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDSVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4261735..4262912,4263483..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275524))
location: region:4261735-4275524:-1
so has part: feature:4275446-4275524:-1:exon
so has part: feature:4274171-4274701:-1:exon
so has part: feature:4266873-4267031:-1:exon
so has part: feature:4265934-4266080:-1:exon
so has part: feature:4265221-4265358:-1:exon
so has part: feature:4264035-4264082:-1:exon
so has part: feature:4263483-4263518:-1:exon
so has part: feature:4261735-4262912:-1:exon

XP_015482021.1
type: Protein
SIO_000068: ncbiprotein

position:4261735:-1
position: 4261735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4275524:-1
position: 4275524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4275446-4275524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274171-4274701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266873-4267031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265934-4266080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4265221-4265358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4264035-4264082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4263483-4263518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4261735-4262912:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X1
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTSDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDSVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4261735..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275524))
location: region:4261735-4275524:-1
so has part: feature:4275446-4275524:-1:exon
so has part: feature:4274171-4274701:-1:exon
so has part: feature:4266873-4267031:-1:exon
so has part: feature:4265934-4266080:-1:exon
so has part: feature:4265221-4265358:-1:exon
so has part: feature:4264035-4264082:-1:exon
so has part: feature:4263375-4263518:-1:exon
so has part: feature:4261735-4262912:-1:exon

XP_033369923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4275446-4275524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274171-4274701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266873-4267031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265934-4266080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4265221-4265358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4264035-4264082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4263375-4263518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4261735-4262912:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X1
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTSDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDSVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4261735..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275524))
location: region:4261735-4275524:-1
so has part: feature:4275446-4275524:-1:exon
so has part: feature:4274171-4274701:-1:exon
so has part: feature:4266873-4267031:-1:exon
so has part: feature:4265934-4266080:-1:exon
so has part: feature:4265221-4265358:-1:exon
so has part: feature:4264035-4264082:-1:exon
so has part: feature:4263375-4263518:-1:exon
so has part: feature:4261735-4262912:-1:exon

XP_033369924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4275446-4275524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274171-4274701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266873-4267031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265934-4266080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4265221-4265358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4264035-4264082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4263375-4263518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4261735-4262912:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X1
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTSDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDSVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4261735..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275524))
location: region:4261735-4275524:-1
so has part: feature:4275446-4275524:-1:exon
so has part: feature:4274171-4274701:-1:exon
so has part: feature:4266873-4267031:-1:exon
so has part: feature:4265934-4266080:-1:exon
so has part: feature:4265221-4265358:-1:exon
so has part: feature:4264035-4264082:-1:exon
so has part: feature:4263375-4263518:-1:exon
so has part: feature:4261735-4262912:-1:exon

XP_033369925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4275446-4275524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274171-4274701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266873-4267031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265934-4266080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4265221-4265358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4264035-4264082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4263375-4263518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4261735-4262912:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X1
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTSDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDSVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4261735..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275524))
location: region:4261735-4275524:-1
so has part: feature:4275446-4275524:-1:exon
so has part: feature:4274171-4274701:-1:exon
so has part: feature:4266873-4267031:-1:exon
so has part: feature:4265934-4266080:-1:exon
so has part: feature:4265221-4265358:-1:exon
so has part: feature:4264035-4264082:-1:exon
so has part: feature:4263375-4263518:-1:exon
so has part: feature:4261735-4262912:-1:exon

XP_033369926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4275446-4275524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274171-4274701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266873-4267031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265934-4266080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4265221-4265358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4264035-4264082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4263375-4263518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4261735-4262912:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X1
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTSDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDSVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4261735..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275524))
location: region:4261735-4275524:-1
so has part: feature:4275446-4275524:-1:exon
so has part: feature:4274171-4274701:-1:exon
so has part: feature:4266873-4267031:-1:exon
so has part: feature:4265934-4266080:-1:exon
so has part: feature:4265221-4265358:-1:exon
so has part: feature:4264035-4264082:-1:exon
so has part: feature:4263375-4263518:-1:exon
so has part: feature:4261735-4262912:-1:exon

XP_033369927.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4275446-4275524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274171-4274701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266873-4267031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265934-4266080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4265221-4265358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4264035-4264082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4263375-4263518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4261735-4262912:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X1
translation: MDPGGGSLGLQTQESKMPHTMIMQDFVAGMAGTAHIDGDHIVVSVPEAVLVSDVVTDDGITLDHGLAAEVVQGPDIITETDVVTEGVIVPDSVLEADVAIEEALDTSDHVLTSDLITETVRVPDQVFVADLVTGPEGHLEHVVQDSVAGADSPTMVSEEVLVTNSDSEAVIQAAGTVPGSTVTIKTEDDDDGKSTSEDYLMISLDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4261735..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4274171..4274701,4275446..4275524))
location: region:4261735-4275524:-1
so has part: feature:4275446-4275524:-1:exon
so has part: feature:4274171-4274701:-1:exon
so has part: feature:4266873-4267031:-1:exon
so has part: feature:4265934-4266080:-1:exon
so has part: feature:4265221-4265358:-1:exon
so has part: feature:4264035-4264082:-1:exon
so has part: feature:4263375-4263518:-1:exon
so has part: feature:4261735-4262912:-1:exon

XP_015482020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4275446-4275524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4274171-4274701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4266873-4267031:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265934-4266080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4265221-4265358:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4264035-4264082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4263375-4263518:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4261735-4262912:-1:exon

ZNF711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: ZNF711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 711 isoform X3
translation: MHYSGDLKATTDPHWSWPGVDDVGEKLDHIGSTPLKISTEVANDDVAKDDGFGSEVIKVYIFKAEAEDDVEIGGTEIVTESDFHNGHSVAGVIEQGGVGRMQREKMVYMAVKDSSQEDEDISCAEIADEVYMEVIVGEEEATSLPDTQLEDSGVNKTFVPVAWAAAYGDERRLPRRYEDGQAAGNNLDTRLENKNGNATQYLQICDSISTNRVLKQKTKKRRRGEARQWQTAVIIGPDGQPLTVYPCHICGKKFKSRGFLKRHMKNHPDHMIKKKYQCTDCDFTTNKKVSFHNHLESHKLINKVDKTHEFTEYTRRYREASPLSSNKLILRDKEPKLHKCKYCDYETAEQGLLNRHLLAVHSKNFPHVCVECGKGFRHPSELKKHMRTHTGEKPYQCQHCVFRCADQSNLKTHIKTKHGTDLPFKCEHCPQAFADEKELQQHTELFQGHKTHQCPHCDHKSTNSSDLKRHIISVHTKDFPHKCEVCEKGFHRPSELKKHSETHKGKKIHQCRHCDFKTSDPFVLSGHILSVHTKDLPFKCKRCKRGFRQQNELKKHMKTHSGRKVYQCQYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEAIM
SIO_010081: ZNF711
subclass of: SO_0000673
so part of: ZNF711
location: complement(join(4261735..4262912,4263375..4263518,4264035..4264082,4265221..4265358,4265934..4266080,4266873..4267031,4270629..4270686))
location: region:4261735-4270686:-1
so has part: feature:4270629-4270686:-1:exon
so has part: feature:4266873-4267031:-1:exon
so has part: feature:4265934-4266080:-1:exon
so has part: feature:4265221-4265358:-1:exon
so has part: feature:4264035-4264082:-1:exon
so has part: feature:4263375-4263518:-1:exon
so has part: feature:4261735-4262912:-1:exon

XP_015482022.1
type: Protein
SIO_000068: ncbiprotein

position:4270686:-1
position: 4270686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4270629-4270686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4266873-4267031:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4265934-4266080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4265221-4265358:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4264035-4264082:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4263375-4263518:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4261735-4262912:-1:exon

LOC107203995
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107203995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4282014..4291378)
location: region:4282014-4291378:-1
so has part: feature:4282014-4291378:-1:exon
subclass of: SO_0000010

107203995
type: Gene
SIO_000068: ncbigene

position:4282014:-1
position: 4282014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4291378:-1
position: 4291378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4282014-4291378:-1:exon

LOC107203995
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107203995
product: uncharacterized LOC107203995
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015626733.2
SIO_010081: LOC107203995
subclass of: SO_0000673
so part of: LOC107203995
location: complement(join(4282014..4282696,4283149..4283287,4284094..4284182,4285112..4285211,4285928..4286101,4286932..4287037,4289241..4291378))
location: region:4282014-4291378:-1
so has part: feature:4289241-4291378:-1:exon
so has part: feature:4286932-4287037:-1:exon
so has part: feature:4285928-4286101:-1:exon
so has part: feature:4285112-4285211:-1:exon
so has part: feature:4284094-4284182:-1:exon
so has part: feature:4283149-4283287:-1:exon
so has part: feature:4282014-4282696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4289241-4291378:-1:exon

position:4289241:-1
position: 4289241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4286932-4287037:-1:exon

position:4286932:-1
position: 4286932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4287037:-1
position: 4287037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4285928-4286101:-1:exon

position:4285928:-1
position: 4285928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4286101:-1
position: 4286101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4285112-4285211:-1:exon

position:4285112:-1
position: 4285112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4285211:-1
position: 4285211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4284094-4284182:-1:exon

position:4284094:-1
position: 4284094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4284182:-1
position: 4284182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4283149-4283287:-1:exon

position:4283149:-1
position: 4283149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4283287:-1
position: 4283287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4282014-4282696:-1:exon

position:4282696:-1
position: 4282696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107203995
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107203995
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107203995
translation: MSFLKVLLCVLVLAGPWLSEASAPNCTGVADFKACLGNADEFCPKSISCQCKNEKPFCRCDYFRSGWKEYWYMGPKCNHLWNTLDFILVATLPAVGLVIIVVVIFSVVYCLKVEKAGKQPQPPPSGAQQNPAFNGDTAASLGHGHHQPAGDTWVGQIPKVVLKRQDFNDASVPNQRQNYSPVYAQPLRPADPSSDYFPQSRAQRDKFDYPRKDLPYPVYPEARQYQRY
SIO_010081: LOC107203995
subclass of: SO_0000673
so part of: LOC107203995
location: complement(join(4282688..4282696,4283149..4283287,4284094..4284182,4285112..4285211,4285928..4286101,4286932..4287037,4289241..4289310))
location: region:4282688-4289310:-1
so has part: feature:4289241-4289310:-1:exon
so has part: feature:4286932-4287037:-1:exon
so has part: feature:4285928-4286101:-1:exon
so has part: feature:4285112-4285211:-1:exon
so has part: feature:4284094-4284182:-1:exon
so has part: feature:4283149-4283287:-1:exon
so has part: feature:4282688-4282696:-1:exon

XP_015482219.1
type: Protein
SIO_000068: ncbiprotein

position:4282688:-1
position: 4282688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4289310:-1
position: 4289310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4289241-4289310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4286932-4287037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4285928-4286101:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4285112-4285211:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4284094-4284182:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4283149-4283287:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4282688-4282696:-1:exon

APOOL
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: APOOL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4292044..4305211)
location: region:4292044-4305211:-1
so has part: feature:4292044-4305211:-1:exon
subclass of: SO_0000010

107203994
type: Gene
SIO_000068: ncbigene

position:4292044:-1
position: 4292044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4305211:-1
position: 4305211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4292044-4305211:-1:exon

APOOL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: APOOL
product: apolipoprotein O like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_015626732.1
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4292044..4295656,4297327..4297483,4299064..4299150,4299500..4299591,4299924..4300022,4300173..4300227,4301299..4301418,4301992..4302096,4305147..4305211))
location: region:4292044-4305211:-1
so has part: feature:4305147-4305211:-1:exon
so has part: feature:4301992-4302096:-1:exon
so has part: feature:4301299-4301418:-1:exon
so has part: feature:4300173-4300227:-1:exon
so has part: feature:4299924-4300022:-1:exon
so has part: feature:4299500-4299591:-1:exon
so has part: feature:4299064-4299150:-1:exon
so has part: feature:4297327-4297483:-1:exon
so has part: feature:4292044-4295656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4305147-4305211:-1:exon

position:4305147:-1
position: 4305147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4301992-4302096:-1:exon

position:4301992:-1
position: 4301992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4302096:-1
position: 4302096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4301299-4301418:-1:exon

position:4301299:-1
position: 4301299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4301418:-1
position: 4301418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4300173-4300227:-1:exon

position:4300173:-1
position: 4300173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4300227:-1
position: 4300227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4299924-4300022:-1:exon

position:4299924:-1
position: 4299924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4300022:-1
position: 4300022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4299500-4299591:-1:exon

position:4299500:-1
position: 4299500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4299591:-1
position: 4299591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4299064-4299150:-1:exon

position:4299064:-1
position: 4299064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4299150:-1
position: 4299150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4297327-4297483:-1:exon

position:4297327:-1
position: 4297327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4297483:-1
position: 4297483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4292044-4295656:-1:exon

position:4295656:-1
position: 4295656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APOOL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: APOOL
product: apolipoprotein O like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_015626731.2
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4292044..4295656,4297327..4297483,4299064..4299150,4299500..4299591,4299924..4300022,4300173..4300227,4301299..4301418,4301992..4302096,4303511..4303596,4305147..4305196))
location: region:4292044-4305196:-1
so has part: feature:4305147-4305196:-1:exon
so has part: feature:4303511-4303596:-1:exon
so has part: feature:4301992-4302096:-1:exon
so has part: feature:4301299-4301418:-1:exon
so has part: feature:4300173-4300227:-1:exon
so has part: feature:4299924-4300022:-1:exon
so has part: feature:4299500-4299591:-1:exon
so has part: feature:4299064-4299150:-1:exon
so has part: feature:4297327-4297483:-1:exon
so has part: feature:4292044-4295656:-1:exon

position:4305196:-1
position: 4305196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4305147-4305196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4303511-4303596:-1:exon

position:4303511:-1
position: 4303511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4303596:-1
position: 4303596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4301992-4302096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4301299-4301418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4300173-4300227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4299924-4300022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4299500-4299591:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4299064-4299150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4297327-4297483:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4292044-4295656:-1:exon

APOOL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: APOOL
product: apolipoprotein O like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033514092.1
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4292044..4295656,4297327..4297483,4299064..4299150,4299500..4299591,4299924..4300022,4300173..4300227,4301299..4301418,4301992..4302096,4303511..4303596,4304221..4304239))
location: region:4292044-4304239:-1
so has part: feature:4304221-4304239:-1:exon
so has part: feature:4303511-4303596:-1:exon
so has part: feature:4301992-4302096:-1:exon
so has part: feature:4301299-4301418:-1:exon
so has part: feature:4300173-4300227:-1:exon
so has part: feature:4299924-4300022:-1:exon
so has part: feature:4299500-4299591:-1:exon
so has part: feature:4299064-4299150:-1:exon
so has part: feature:4297327-4297483:-1:exon
so has part: feature:4292044-4295656:-1:exon

position:4304239:-1
position: 4304239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4304221-4304239:-1:exon

position:4304221:-1
position: 4304221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4303511-4303596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4301992-4302096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4301299-4301418:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4300173-4300227:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4299924-4300022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4299500-4299591:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4299064-4299150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4297327-4297483:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4292044-4295656:-1:exon

APOOL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: APOOL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC27 isoform X2
translation: MAAKVAKLAAVSSGLPFVCITVYAATEKESKSQLVKPDKLPIYSAPPLKSKYIEEQPGRLQQQLTAVRTTTGRYFGWCQSVYVFIKNGIMDTIQFGKDAYVYLNNPPPEFLPKAAVITVSGLVGVVLARKGSRFKRIAYPLGLTTVGYSVCYPAQSVVIAKVTGKKLLCASHQTYEAVRSLWADKETVTKLQQESKPIMQEDKKKKGISNTKPESAVESRSFNTTESSPGESRSNEEPVPSSGTGKKSKFKPNPKLVDHGQSSPEDVDMYSTRS
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4295559..4295656,4297327..4297483,4299064..4299150,4299500..4299591,4299924..4300022,4300173..4300227,4301299..4301418,4301992..4302096,4305147..4305158))
location: region:4295559-4305158:-1
so has part: feature:4305147-4305158:-1:exon
so has part: feature:4301992-4302096:-1:exon
so has part: feature:4301299-4301418:-1:exon
so has part: feature:4300173-4300227:-1:exon
so has part: feature:4299924-4300022:-1:exon
so has part: feature:4299500-4299591:-1:exon
so has part: feature:4299064-4299150:-1:exon
so has part: feature:4297327-4297483:-1:exon
so has part: feature:4295559-4295656:-1:exon

XP_015482218.1
type: Protein
SIO_000068: ncbiprotein

position:4295559:-1
position: 4295559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4305158:-1
position: 4305158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4305147-4305158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4301992-4302096:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4301299-4301418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4300173-4300227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4299924-4300022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4299500-4299591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4299064-4299150:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4297327-4297483:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4295559-4295656:-1:exon

APOOL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: APOOL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC27 isoform X1
translation: MQRLKAKIIQVAKLAAVSSGLPFVCITVYAATEKESKSQLVKPDKLPIYSAPPLKSKYIEEQPGRLQQQLTAVRTTTGRYFGWCQSVYVFIKNGIMDTIQFGKDAYVYLNNPPPEFLPKAAVITVSGLVGVVLARKGSRFKRIAYPLGLTTVGYSVCYPAQSVVIAKVTGKKLLCASHQTYEAVRSLWADKETVTKLQQESKPIMQEDKKKKGISNTKPESAVESRSFNTTESSPGESRSNEEPVPSSGTGKKSKFKPNPKLVDHGQSSPEDVDMYSTRS
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4295559..4295656,4297327..4297483,4299064..4299150,4299500..4299591,4299924..4300022,4300173..4300227,4301299..4301418,4301992..4302096,4303511..4303540))
location: region:4295559-4303540:-1
so has part: feature:4303511-4303540:-1:exon
so has part: feature:4301992-4302096:-1:exon
so has part: feature:4301299-4301418:-1:exon
so has part: feature:4300173-4300227:-1:exon
so has part: feature:4299924-4300022:-1:exon
so has part: feature:4299500-4299591:-1:exon
so has part: feature:4299064-4299150:-1:exon
so has part: feature:4297327-4297483:-1:exon
so has part: feature:4295559-4295656:-1:exon

XP_033369983.1
type: Protein
SIO_000068: ncbiprotein

position:4303540:-1
position: 4303540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4303511-4303540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4301992-4302096:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4301299-4301418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4300173-4300227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4299924-4300022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4299500-4299591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4299064-4299150:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4297327-4297483:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4295559-4295656:-1:exon

APOOL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: APOOL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MICOS complex subunit MIC27 isoform X1
translation: MQRLKAKIIQVAKLAAVSSGLPFVCITVYAATEKESKSQLVKPDKLPIYSAPPLKSKYIEEQPGRLQQQLTAVRTTTGRYFGWCQSVYVFIKNGIMDTIQFGKDAYVYLNNPPPEFLPKAAVITVSGLVGVVLARKGSRFKRIAYPLGLTTVGYSVCYPAQSVVIAKVTGKKLLCASHQTYEAVRSLWADKETVTKLQQESKPIMQEDKKKKGISNTKPESAVESRSFNTTESSPGESRSNEEPVPSSGTGKKSKFKPNPKLVDHGQSSPEDVDMYSTRS
SIO_010081: APOOL
subclass of: SO_0000673
so part of: APOOL
location: complement(join(4295559..4295656,4297327..4297483,4299064..4299150,4299500..4299591,4299924..4300022,4300173..4300227,4301299..4301418,4301992..4302096,4303511..4303540))
location: region:4295559-4303540:-1
so has part: feature:4303511-4303540:-1:exon
so has part: feature:4301992-4302096:-1:exon
so has part: feature:4301299-4301418:-1:exon
so has part: feature:4300173-4300227:-1:exon
so has part: feature:4299924-4300022:-1:exon
so has part: feature:4299500-4299591:-1:exon
so has part: feature:4299064-4299150:-1:exon
so has part: feature:4297327-4297483:-1:exon
so has part: feature:4295559-4295656:-1:exon

XP_015482217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4303511-4303540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4301992-4302096:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4301299-4301418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4300173-4300227:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4299924-4300022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4299500-4299591:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4299064-4299150:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4297327-4297483:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4295559-4295656:-1:exon

LOC107203976
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107203976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4309894..4478648)
location: region:4309894-4478648:-1
so has part: feature:4309894-4478648:-1:exon
subclass of: SO_0000010

107203976
type: Gene
SIO_000068: ncbigene

position:4309894:-1
position: 4309894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4478648:-1
position: 4478648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4309894-4478648:-1:exon

LOC107203976
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107203976
product: connector enhancer of kinase suppressor of ras 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033514099.1
SIO_010081: LOC107203976
subclass of: SO_0000673
so part of: LOC107203976
location: complement(join(4309894..4313077,4313710..4313909,4314224..4314731,4316034..4316137,4316864..4316934,4326807..4326878,4332253..4332326,4333790..4333965,4335042..4335090,4337909..4337957,4343789..4343823,4352827..4353074,4354644..4354730,4358395..4358600,4359158..4359291,4363158..4363304,4371958..4372026,4376401..4376460,4385104..4385223,4387681..4387722,4394016..4394103,4395363..4395565,4415202..4415365,4478115..4478188,4478441..4478648))
location: region:4309894-4478648:-1
so has part: feature:4478441-4478648:-1:exon
so has part: feature:4478115-4478188:-1:exon
so has part: feature:4415202-4415365:-1:exon
so has part: feature:4395363-4395565:-1:exon
so has part: feature:4394016-4394103:-1:exon
so has part: feature:4387681-4387722:-1:exon
so has part: feature:4385104-4385223:-1:exon
so has part: feature:4376401-4376460:-1:exon
so has part: feature:4371958-4372026:-1:exon
so has part: feature:4363158-4363304:-1:exon
so has part: feature:4359158-4359291:-1:exon
so has part: feature:4358395-4358600:-1:exon
so has part: feature:4354644-4354730:-1:exon
so has part: feature:4352827-4353074:-1:exon
so has part: feature:4343789-4343823:-1:exon
so has part: feature:4337909-4337957:-1:exon
so has part: feature:4335042-4335090:-1:exon
so has part: feature:4333790-4333965:-1:exon
so has part: feature:4332253-4332326:-1:exon
so has part: feature:4326807-4326878:-1:exon
so has part: feature:4316864-4316934:-1:exon
so has part: feature:4316034-4316137:-1:exon
so has part: feature:4314224-4314731:-1:exon
so has part: feature:4313710-4313909:-1:exon
so has part: feature:4309894-4313077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4478441-4478648:-1:exon

position:4478441:-1
position: 4478441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4478115-4478188:-1:exon

position:4478115:-1
position: 4478115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4478188:-1
position: 4478188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4415202-4415365:-1:exon

position:4415202:-1
position: 4415202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4415365:-1
position: 4415365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4395363-4395565:-1:exon

position:4395363:-1
position: 4395363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4395565:-1
position: 4395565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4394016-4394103:-1:exon

position:4394016:-1
position: 4394016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4394103:-1
position: 4394103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4387681-4387722:-1:exon

position:4387681:-1
position: 4387681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4387722:-1
position: 4387722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4385104-4385223:-1:exon

position:4385104:-1
position: 4385104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4385223:-1
position: 4385223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4376401-4376460:-1:exon

position:4376401:-1
position: 4376401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4376460:-1
position: 4376460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4371958-4372026:-1:exon

position:4371958:-1
position: 4371958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4372026:-1
position: 4372026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4363158-4363304:-1:exon

position:4363158:-1
position: 4363158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4363304:-1
position: 4363304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4359158-4359291:-1:exon

position:4359158:-1
position: 4359158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4359291:-1
position: 4359291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4358395-4358600:-1:exon

position:4358395:-1
position: 4358395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4358600:-1
position: 4358600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4354644-4354730:-1:exon

position:4354644:-1
position: 4354644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4354730:-1
position: 4354730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4352827-4353074:-1:exon

position:4352827:-1
position: 4352827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4353074:-1
position: 4353074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4343789-4343823:-1:exon

position:4343789:-1
position: 4343789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4343823:-1
position: 4343823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4337909-4337957:-1:exon

position:4337909:-1
position: 4337909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4337957:-1
position: 4337957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4335042-4335090:-1:exon

position:4335042:-1
position: 4335042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4335090:-1
position: 4335090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4333790-4333965:-1:exon

position:4333790:-1
position: 4333790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4333965:-1
position: 4333965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4332253-4332326:-1:exon

position:4332253:-1
position: 4332253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4332326:-1
position: 4332326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4326807-4326878:-1:exon

position:4326807:-1
position: 4326807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4326878:-1
position: 4326878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4316864-4316934:-1:exon

position:4316864:-1
position: 4316864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4316934:-1
position: 4316934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4316034-4316137:-1:exon

position:4316034:-1
position: 4316034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4316137:-1
position: 4316137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4314224-4314731:-1:exon

position:4314224:-1
position: 4314224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4314731:-1
position: 4314731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4313710-4313909:-1:exon

position:4313710:-1
position: 4313710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4313909:-1
position: 4313909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4309894-4313077:-1:exon

position:4313077:-1
position: 4313077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107203976
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: LOC107203976
product: connector enhancer of kinase suppressor of ras 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_033514100.1
SIO_010081: LOC107203976
subclass of: SO_0000673
so part of: LOC107203976
location: complement(join(4309894..4313077,4313710..4313909,4314224..4314731,4316034..4316134,4316864..4316934,4326807..4326878,4332253..4332326,4333790..4333965,4335042..4335090,4337909..4337957,4343789..4343823,4352827..4353074,4354644..4354730,4358395..4358600,4359158..4359291,4363158..4363304,4371958..4372026,4376401..4376460,4385104..4385223,4387681..4387722,4394016..4394103,4395363..4395565,4415202..4415365,4478115..4478188,4478441..4478647))
location: region:4309894-4478647:-1
so has part: feature:4478441-4478647:-1:exon
so has part: feature:4478115-4478188:-1:exon
so has part: feature:4415202-4415365:-1:exon
so has part: feature:4395363-4395565:-1:exon
so has part: feature:4394016-4394103:-1:exon
so has part: feature:4387681-4387722:-1:exon
so has part: feature:4385104-4385223:-1:exon
so has part: feature:4376401-4376460:-1:exon
so has part: feature:4371958-4372026:-1:exon
so has part: feature:4363158-4363304:-1:exon
so has part: feature:4359158-4359291:-1:exon
so has part: feature:4358395-4358600:-1:exon
so has part: feature:4354644-4354730:-1:exon
so has part: feature:4352827-4353074:-1:exon
so has part: feature:4343789-4343823:-1:exon
so has part: feature:4337909-4337957:-1:exon
so has part: feature:4335042-4335090:-1:exon
so has part: feature:4333790-4333965:-1:exon
so has part: feature:4332253-4332326:-1:exon
so has part: feature:4326807-4326878:-1:exon
so has part: feature:4316864-4316934:-1:exon
so has part: feature:4316034-4316134:-1:exon
so has part: feature:4314224-4314731:-1:exon
so has part: feature:4313710-4313909:-1:exon
so has part: feature:4309894-4313077:-1:exon

position:4478647:-1
position: 4478647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4478441-4478647:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4478115-4478188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4415202-4415365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4395363-4395565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4394016-4394103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4387681-4387722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4385104-4385223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4376401-4376460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4371958-4372026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4363158-4363304:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4359158-4359291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4358395-4358600:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4354644-4354730:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4352827-4353074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4343789-4343823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4337909-4337957:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4335042-4335090:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4333790-4333965:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4332253-4332326:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4326807-4326878:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4316864-4316934:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4316034-4316134:-1:exon

position:4316134:-1
position: 4316134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4314224-4314731:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4313710-4313909:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4309894-4313077:-1:exon

LOC107203976
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107203976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: connector enhancer of kinase suppressor of ras 2-like isoform X2
translation: MFYPCRWLGGQSLCDLMMALVMEPISKWTPKQVVDWMKGLDDCLQQYIKNFEREKINGEQLLHITHQELEELGVTRIGHQELILEAVDLLCALNYGLETENLRTLSHKLNASAKNLQNFITGRRRSGHYDGRASRRLPNDFLTSVVDLIGAAKNLLAWLDRSPFVSVTEYSLLKNNIVQLCLELTTIVQQDCTVYETENKILHVCKTLSGICDHIISLSSDSLVSQSAHLEVVHLTSIMPSEGLGMYIKSTYDGLHVITGTTENSPADQCKKIHAGDEVIQVNHQTVVGWQLKNLVNALWEDPNGVILTLKKRPQNTLVSAPALLKNVRWKPLALQPVIPTSPTSSSTTPTSTMGMSSKMDNSALQDVFILSPMSGLYGPRDEIGIMSCDDISKYGKSGMKGSESPNYFLEHESGKYYTLIEGESHPGSSEYERSRATGVRRREKTPTHGDLRPVSMPTEYSWIGESKEQNMYKRGSRDSENSLLRYLSDDKILVIQEEPLAQKDSKRDTGRRSRKKGKAPGNPSYPISPSVLASSIRLEPGQQDVLSFSLAENNTVPLYHRAGDTVSGDTERYASSAIDHPGNTSMRKSFHYASLRVKSRKWSKGSSLSSVSRRRISCKDLGHGDCEGWLWKKKDAKGYFTQKWKKYWFILKDSSLYWYTNQNDEKAEGFISLPEFRIDRAIECRRKHAFKACHPKIKSFYFATDCLEEMNRWMNRLGLAAIGYTPDDKDIHPDEDYWSESDQDDIDGSLTLKQEGSSTLCDTYHRTPSVNSSSPFPEAKQGRHFSSESTYSHSSAEDSRQDAAGSTHSSGCRPPYRERRSWQDLIETPLTSSGLHFLQTVPPEAEYVSGRPGMSPDKRRQATLPVQRRHNFEQDGPFPLVECPRGHGSHGRPQKQRSQSLPRNRDVRGKGRVKSIEGPDDSLEEKVPIRRHNSFCAEENIKEIEEITDGLQELYRTLEEASLSAFGEQRPSTKQEFRKSFVKRCNDPVINEKLHHIRVLKSTLKAKEGDLTVINNLLDDPNLTSKKFKDWKLKNYEFFLDICEYSAAGKSQNGASELASSAPMLTHTHSFIETHV
SIO_010081: LOC107203976
subclass of: SO_0000673
so part of: LOC107203976
location: complement(join(4312862..4313077,4313710..4313909,4314224..4314731,4316034..4316134,4316864..4316934,4326807..4326878,4332253..4332326,4333790..4333965,4335042..4335090,4337909..4337957,4343789..4343823,4352827..4353074,4354644..4354730,4358395..4358600,4359158..4359291,4363158..4363304,4371958..4372026,4376401..4376460,4385104..4385223,4387681..4387722,4394016..4394103,4395363..4395565,4415202..4415365,4478115..4478188,4478441..4478481))
location: region:4312862-4478481:-1
so has part: feature:4478441-4478481:-1:exon
so has part: feature:4478115-4478188:-1:exon
so has part: feature:4415202-4415365:-1:exon
so has part: feature:4395363-4395565:-1:exon
so has part: feature:4394016-4394103:-1:exon
so has part: feature:4387681-4387722:-1:exon
so has part: feature:4385104-4385223:-1:exon
so has part: feature:4376401-4376460:-1:exon
so has part: feature:4371958-4372026:-1:exon
so has part: feature:4363158-4363304:-1:exon
so has part: feature:4359158-4359291:-1:exon
so has part: feature:4358395-4358600:-1:exon
so has part: feature:4354644-4354730:-1:exon
so has part: feature:4352827-4353074:-1:exon
so has part: feature:4343789-4343823:-1:exon
so has part: feature:4337909-4337957:-1:exon
so has part: feature:4335042-4335090:-1:exon
so has part: feature:4333790-4333965:-1:exon
so has part: feature:4332253-4332326:-1:exon
so has part: feature:4326807-4326878:-1:exon
so has part: feature:4316864-4316934:-1:exon
so has part: feature:4316034-4316134:-1:exon
so has part: feature:4314224-4314731:-1:exon
so has part: feature:4313710-4313909:-1:exon
so has part: feature:4312862-4313077:-1:exon

XP_033369991.1
type: Protein
SIO_000068: ncbiprotein

position:4312862:-1
position: 4312862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4478481:-1
position: 4478481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4478441-4478481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4478115-4478188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4415202-4415365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4395363-4395565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4394016-4394103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4387681-4387722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4385104-4385223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4376401-4376460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4371958-4372026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4363158-4363304:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4359158-4359291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4358395-4358600:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4354644-4354730:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4352827-4353074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4343789-4343823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4337909-4337957:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4335042-4335090:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4333790-4333965:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4332253-4332326:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4326807-4326878:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4316864-4316934:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4316034-4316134:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4314224-4314731:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4313710-4313909:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4312862-4313077:-1:exon

LOC107203976
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: LOC107203976
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: connector enhancer of kinase suppressor of ras 2-like isoform X1
translation: MFYPCRWLGGQSLCDLMMALVMEPISKWTPKQVVDWMKGLDDCLQQYIKNFEREKINGEQLLHITHQELEELGVTRIGHQELILEAVDLLCALNYGLETENLRTLSHKLNASAKNLQNFITGRRRSGHYDGRASRRLPNDFLTSVVDLIGAAKNLLAWLDRSPFVSVTEYSLLKNNIVQLCLELTTIVQQDCTVYETENKILHVCKTLSGICDHIISLSSDSLVSQSAHLEVVHLTSIMPSEGLGMYIKSTYDGLHVITGTTENSPADQCKKIHAGDEVIQVNHQTVVGWQLKNLVNALWEDPNGVILTLKKRPQNTLVSAPALLKNVRWKPLALQPVIPTSPTSSSTTPTSTMGMSSKMDNSALQDVFILSPMSGLYGPRDEIGIMSCDDISKYGKSGMKGSESPNYFLEHESGKYYTLIEGESHPGSSEYERSRATGVRRREKTPTHGDLRPVSMPTEYSWIGESKEQNMYKRGSRDSENSLLRYLSDDKILVIQEEPLAQKDSKRDTGRRSRKKGKAPGNPSYPISPSVLASSIRLEPGQQDVLSFSLAENNTVPLYHRAGDTVSGDTERYASSAIDHPGNTSMRKSFHYASLRVKSRKWSKGSSLSSVSRRRISCKDLGHGDCEGWLWKKKDAKGYFTQKWKKYWFILKDSSLYWYTNQNDEKAEGFISLPEFRIDRAIECRRKHAFKACHPKIKSFYFATDCLEEMNRWMNRLGLAAIGYTPDDKDIHPDEADYWSESDQDDIDGSLTLKQEGSSTLCDTYHRTPSVNSSSPFPEAKQGRHFSSESTYSHSSAEDSRQDAAGSTHSSGCRPPYRERRSWQDLIETPLTSSGLHFLQTVPPEAEYVSGRPGMSPDKRRQATLPVQRRHNFEQDGPFPLVECPRGHGSHGRPQKQRSQSLPRNRDVRGKGRVKSIEGPDDSLEEKVPIRRHNSFCAEENIKEIEEITDGLQELYRTLEEASLSAFGEQRPSTKQEFRKSFVKRCNDPVINEKLHHIRVLKSTLKAKEGDLTVINNLLDDPNLTSKKFKDWKLKNYEFFLDICEYSAAGKSQNGASELASSAPMLTHTHSFIETHV
SIO_010081: LOC107203976
subclass of: SO_0000673
so part of: LOC107203976
location: complement(join(4312862..4313077,4313710..4313909,4314224..4314731,4316034..4316137,4316864..4316934,4326807..4326878,4332253..4332326,4333790..4333965,4335042..4335090,4337909..4337957,4343789..4343823,4352827..4353074,4354644..4354730,4358395..4358600,4359158..4359291,4363158..4363304,4371958..4372026,4376401..4376460,4385104..4385223,4387681..4387722,4394016..4394103,4395363..4395565,4415202..4415365,4478115..4478188,4478441..4478481))
location: region:4312862-4478481:-1
so has part: feature:4478441-4478481:-1:exon
so has part: feature:4478115-4478188:-1:exon
so has part: feature:4415202-4415365:-1:exon
so has part: feature:4395363-4395565:-1:exon
so has part: feature:4394016-4394103:-1:exon
so has part: feature:4387681-4387722:-1:exon
so has part: feature:4385104-4385223:-1:exon
so has part: feature:4376401-4376460:-1:exon
so has part: feature:4371958-4372026:-1:exon
so has part: feature:4363158-4363304:-1:exon
so has part: feature:4359158-4359291:-1:exon
so has part: feature:4358395-4358600:-1:exon
so has part: feature:4354644-4354730:-1:exon
so has part: feature:4352827-4353074:-1:exon
so has part: feature:4343789-4343823:-1:exon
so has part: feature:4337909-4337957:-1:exon
so has part: feature:4335042-4335090:-1:exon
so has part: feature:4333790-4333965:-1:exon
so has part: feature:4332253-4332326:-1:exon
so has part: feature:4326807-4326878:-1:exon
so has part: feature:4316864-4316934:-1:exon
so has part: feature:4316034-4316137:-1:exon
so has part: feature:4314224-4314731:-1:exon
so has part: feature:4313710-4313909:-1:exon
so has part: feature:4312862-4313077:-1:exon

XP_033369990.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4478441-4478481:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4478115-4478188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4415202-4415365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4395363-4395565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4394016-4394103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4387681-4387722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4385104-4385223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4376401-4376460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4371958-4372026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4363158-4363304:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4359158-4359291:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4358395-4358600:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4354644-4354730:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4352827-4353074:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4343789-4343823:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4337909-4337957:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4335042-4335090:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4333790-4333965:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4332253-4332326:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4326807-4326878:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4316864-4316934:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4316034-4316137:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4314224-4314731:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4313710-4313909:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4312862-4313077:-1:exon

HDX
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: HDX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4496766..4538077
location: region:4496766-4538077:1
so has part: feature:4496766-4538077:1:exon
subclass of: SO_0000010

107203961
type: Gene
SIO_000068: ncbigene

position:4496766:1
position: 4496766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4538077:1
position: 4538077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4496766-4538077:1:exon

HDX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: HDX
product: highly divergent homeobox, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015626668.2
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4496766..4496926,4500531..4500663,4504291..4504437,4506284..4507402,4511172..4511225,4520759..4520905,4524329..4524536,4527504..4527583,4529136..4529219,4531250..4531372,4531576..4538077)
location: region:4496766-4538077:1
so has part: feature:4496766-4496926:1:exon
so has part: feature:4500531-4500663:1:exon
so has part: feature:4504291-4504437:1:exon
so has part: feature:4506284-4507402:1:exon
so has part: feature:4511172-4511225:1:exon
so has part: feature:4520759-4520905:1:exon
so has part: feature:4524329-4524536:1:exon
so has part: feature:4527504-4527583:1:exon
so has part: feature:4529136-4529219:1:exon
so has part: feature:4531250-4531372:1:exon
so has part: feature:4531576-4538077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4496766-4496926:1:exon

position:4496926:1
position: 4496926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4500531-4500663:1:exon

position:4500531:1
position: 4500531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4500663:1
position: 4500663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4504291-4504437:1:exon

position:4504291:1
position: 4504291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4504437:1
position: 4504437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4506284-4507402:1:exon

position:4506284:1
position: 4506284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4507402:1
position: 4507402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4511172-4511225:1:exon

position:4511172:1
position: 4511172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4511225:1
position: 4511225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4520759-4520905:1:exon

position:4520759:1
position: 4520759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4520905:1
position: 4520905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4524329-4524536:1:exon

position:4524329:1
position: 4524329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4524536:1
position: 4524536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4527504-4527583:1:exon

position:4527504:1
position: 4527504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4527583:1
position: 4527583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4529136-4529219:1:exon

position:4529136:1
position: 4529136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4529219:1
position: 4529219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4531250-4531372:1:exon

position:4531250:1
position: 4531250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4531372:1
position: 4531372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4531576-4538077:1:exon

position:4531576:1
position: 4531576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9157
gene: HDX
product: highly divergent homeobox, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_015626669.2
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4496766..4496926,4504291..4504437,4506284..4507402,4511172..4511225,4520759..4520905,4524329..4524536,4527504..4527583,4529136..4529219,4531250..4531372,4531576..4538077)
location: region:4496766-4538077:1
so has part: feature:4496766-4496926:1:exon
so has part: feature:4504291-4504437:1:exon
so has part: feature:4506284-4507402:1:exon
so has part: feature:4511172-4511225:1:exon
so has part: feature:4520759-4520905:1:exon
so has part: feature:4524329-4524536:1:exon
so has part: feature:4527504-4527583:1:exon
so has part: feature:4529136-4529219:1:exon
so has part: feature:4531250-4531372:1:exon
so has part: feature:4531576-4538077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4496766-4496926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4504291-4504437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4506284-4507402:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511172-4511225:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4520759-4520905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4524329-4524536:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4527504-4527583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4529136-4529219:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4531250-4531372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4531576-4538077:1:exon

HDX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: HDX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: highly divergent homeobox isoform X1
translation: MWILRFETKMNLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMSSKIATESGGIPPGTAPATPSMPPEAAVRNVVNIARSQSQQSSWSSSNNDVIVTGIYSSASSSGRPGAAKYTNASVAELHKTSIPRLPGRSDADFQQQHIPLGRQIPHCKNASLLVGEKTIILARQTSVLNSANSIYSHTKKSYGSSSVQTAELVLPQKPMICHRPCKAEPLGCQRSHKPEHAALASHVSPGPRAHPRDPACGTQNLEIREVFSLAVTDQPQRLVAGSTTQKHPSLEGSCLSIAMETGDVDDEYAREEELASMGAQIQSCSRYCEGSGSGRWDNQSAAGPGRSGGCGAQLGSARDVPDNLLYHSREFHLPARTSLHTTSSTIYNTSNAARSTFSPHFTSSSQLKLSQNQNNYQISGNLTVPWITGCSRKRALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVAAELNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSDQSEFVSKSALNPGEETATEVGDDNDRNDEVSICLSEGSSQEETNEALQNEEIGHKDDDQNPVSTDNVKIEILDDEESDLISNSEVDQMSSLLDYKSEEVRFIESQLENHKQKYFELQTFTRSLILAIKADDKEQQQALLSDLPPELEEMDFNHTSPEPDDTSFSLSSLSEKNASDSL
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4500637..4500663,4504291..4504437,4506284..4507402,4511172..4511225,4520759..4520905,4524329..4524536,4527504..4527583,4529136..4529219,4531250..4531372,4531576..4531701)
location: region:4500637-4531701:1
so has part: feature:4500637-4500663:1:exon
so has part: feature:4504291-4504437:1:exon
so has part: feature:4506284-4507402:1:exon
so has part: feature:4511172-4511225:1:exon
so has part: feature:4520759-4520905:1:exon
so has part: feature:4524329-4524536:1:exon
so has part: feature:4527504-4527583:1:exon
so has part: feature:4529136-4529219:1:exon
so has part: feature:4531250-4531372:1:exon
so has part: feature:4531576-4531701:1:exon

XP_015482154.1
type: Protein
SIO_000068: ncbiprotein

position:4500637:1
position: 4500637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4531701:1
position: 4531701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4500637-4500663:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4504291-4504437:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4506284-4507402:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4511172-4511225:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4520759-4520905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4524329-4524536:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4527504-4527583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4529136-4529219:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4531250-4531372:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4531576-4531701:1:exon

HDX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9157
gene: HDX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: highly divergent homeobox isoform X2
translation: MNLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMSSKIATESGGIPPGTAPATPSMPPEAAVRNVVNIARSQSQQSSWSSSNNDVIVTGIYSSASSSGRPGAAKYTNASVAELHKTSIPRLPGRSDADFQQQHIPLGRQIPHCKNASLLVGEKTIILARQTSVLNSANSIYSHTKKSYGSSSVQTAELVLPQKPMICHRPCKAEPLGCQRSHKPEHAALASHVSPGPRAHPRDPACGTQNLEIREVFSLAVTDQPQRLVAGSTTQKHPSLEGSCLSIAMETGDVDDEYAREEELASMGAQIQSCSRYCEGSGSGRWDNQSAAGPGRSGGCGAQLGSARDVPDNLLYHSREFHLPARTSLHTTSSTIYNTSNAARSTFSPHFTSSSQLKLSQNQNNYQISGNLTVPWITGCSRKRALQDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVAAELNVDCEIVRTWIGNRRRKYRLMGIEVPPPRGGPADFSDQSEFVSKSALNPGEETATEVGDDNDRNDEVSICLSEGSSQEETNEALQNEEIGHKDDDQNPVSTDNVKIEILDDEESDLISNSEVDQMSSLLDYKSEEVRFIESQLENHKQKYFELQTFTRSLILAIKADDKEQQQALLSDLPPELEEMDFNHTSPEPDDTSFSLSSLSEKNASDSL
SIO_010081: HDX
subclass of: SO_0000673
so part of: HDX
location: join(4504291..4504437,4506284..4507402,4511172..4511225,4520759..4520905,4524329..4524536,4527504..4527583,4529136..4529219,4531250..4531372,4531576..4531701)
location: region:4504291-4531701:1
so has part: feature:4504291-4504437:1:exon
so has part: feature:4506284-4507402:1:exon
so has part: feature:4511172-4511225:1:exon
so has part: feature:4520759-4520905:1:exon
so has part: feature:4524329-4524536:1:exon
so has part: feature:4527504-4527583:1:exon
so has part: feature:4529136-4529219:1:exon
so has part: feature:4531250-4531372:1:exon
so has part: feature:4531576-4531701:1:exon

XP_015482155.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4504291-4504437:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4506284-4507402:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4511172-4511225:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4520759-4520905:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4524329-4524536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4527504-4527583:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4529136-4529219:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4531250-4531372:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4531576-4531701:1:exon

LOC107203909
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: LOC107203909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4546983..4553888)
location: region:4546983-4553888:-1
so has part: feature:4546983-4553888:-1:exon
subclass of: SO_0000011

107203909
type: Gene
SIO_000068: ncbigene

position:4546983:-1
position: 4546983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4553888:-1
position: 4553888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4546983-4553888:-1:exon

LOC107203909
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9157
nc RNA class: lncRNA
gene: LOC107203909
product: uncharacterized LOC107203909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_001521410.2
SIO_010081: LOC107203909
subclass of: SO_0000673
so part of: LOC107203909
location: complement(join(4546983..4548640,4551297..4551470,4553006..4553888))
location: region:4546983-4553888:-1
so has part: feature:4553006-4553888:-1:exon
so has part: feature:4551297-4551470:-1:exon
so has part: feature:4546983-4548640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4553006-4553888:-1:exon

position:4553006:-1
position: 4553006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4551297-4551470:-1:exon

position:4551297:-1
position: 4551297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4551470:-1
position: 4551470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4546983-4548640:-1:exon

position:4548640:-1
position: 4548640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS6KA6
type: Gene
subclass of: SO_0000704
RO_0002162: 9157
gene: RPS6KA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4554977..4591062
location: region:4554977-4591062:1
so has part: feature:4554977-4591062:1:exon
subclass of: SO_0000010

107203908
type: Gene
SIO_000068: ncbigene