Pelolinea submarina strain MO-CFX1 chromosome, complete genome.
Bacteria; Chloroflexota; Anaerolineae; Anaerolineales; Anaerolineaceae; Pelolinea.
Pelolinea submarina gen. nov., sp. nov., an anaerobic, filamentous bacterium of the phylum Chloroflexi isolated from subseafloor sediment
Int J Syst Evol Microbiol 64 (Pt 3), 812-818 (2014)
Complete genome sequence of Pelolinea submarina MO-CFX1
Submitted (08-DEC-2017) Contact:Hiroyuki Imachi Japan Agency for Maine-Earth Science and Technology, Department of Subsurface Geobiological Analysis and Research; 2-15 Natsushima-cho, Yokosuka, Kanagawa 237-0026, Japan URL :http://www.jamstec.go.jp
REFSEQ INFORMATION: The reference sequence is identical to\nAP018437.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: CLC genomic workbench v. 9.0\nGenome Coverage :: 1000x\nSequencing Technology :: Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/31/2022 01:38:14\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,134\nCDSs (total) :: 3,079\nGenes (coding) :: 3,070\nCDSs (with protein) :: 3,070\nGenes (RNA) :: 55\nrRNAs :: 1, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 1, 1, 1 (5S, 16S, 23S)\ntRNAs :: 49\nncRNAs :: 3\nPseudo Genes (total) :: 9\nCDSs (without protein) :: 9\nPseudo Genes (ambiguous residues) :: 0 of 9\nPseudo Genes (frameshifted) :: 0 of 9\nPseudo Genes (incomplete) :: 9 of 9\nPseudo Genes (internal stop) :: 0 of 9\nCRISPR Arrays :: 1\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_013560310.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_013560309.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560308.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:TIGR01084.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024970.2
COORDINATES: protein motif:HMM:TIGR00377.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_013559427.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015618978.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00964.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_001832303.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_016293571.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560300.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560298.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558879.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558880.1
3-methyl-2-oxobutanoate dehydrogenase subunit VorB
COORDINATES: similar to AA sequence:RefSeq:WP_013558881.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558882.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561358.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561359.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015049.2
COORDINATES: protein motif:HMM:NF004226.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560973.1
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF012318.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:NF013705.2
COORDINATES: protein motif:HMM:NF016874.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558953.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0003677 - DNA binding [Evidence IEA]; GO:0009381 - excinuclease ABC activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558884.1
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03847.1
COORDINATES: protein motif:HMM:TIGR03843.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561128.1
COORDINATES: protein motif:HMM:TIGR01496.1
GO:0004156 - dihydropteroate synthase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00309.1
GO:0016471 - vacuolar proton-transporting V-type ATPase complex [Evidence IEA]
GO:0008553 - P-type proton-exporting transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010744508.1
COORDINATES: protein motif:HMM:NF003220.0
COORDINATES: protein motif:HMM:NF014092.2
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: protein motif:HMM:NF014093.2
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: protein motif:HMM:NF013647.2
V-type ATPase 116kDa subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558437.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019156.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561408.1
GO:0003676 - nucleic acid binding [Evidence IEA]
S1 RNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560896.1
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012376.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558782.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558781.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015957.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558504.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558822.1
GO:0004124 - cysteine synthase activity [Evidence IEA]
GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017638459.1
GO:0009001 - serine O-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012415.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559246.1
GO:0008252 - nucleotidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561470.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561469.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561468.1
GO:0033862 - UMP kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560878.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560883.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560882.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0050066 - lysine 2,3-aminomutase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046440 - L-lysine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00331.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: protein motif:HMM:NF013212.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560886.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560885.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF018076.2
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:NF020442.2
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF012334.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF013630.2
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:TIGR00211.2
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016176834.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_017631298.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013700.2
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04336.1
COORDINATES: protein motif:HMM:NF014517.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558838.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00259.1
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00174
cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: protein motif:HMM:NF024919.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561350.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: protein motif:HMM:NF014571.2
GO:0046353 - aminoglycoside 3-N-acetyltransferase activity [Evidence IEA]
GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:NF017864.2
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: protein motif:HMM:NF020916.2
polyphosphate polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF027640.2
COORDINATES: protein motif:HMM:NF020337.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559300.1
COORDINATES: protein motif:HMM:NF019350.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF022702.2
DUF3048 C-terminal domain-containing protein
COORDINATES: nucleotide motif:Rfam:14.4:RF01051
cyclic di-GMP riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF014711.2
COORDINATES: protein motif:HMM:TIGR01280.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: protein motif:HMM:NF012792.2
COORDINATES: protein motif:HMM:NF016908.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561088.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
COORDINATES: protein motif:HMM:NF004012.0
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: similar to AA sequence:RefSeq:WP_013558627.1
COORDINATES: protein motif:HMM:NF014716.2
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: protein motif:HMM:NF014038.2
COORDINATES: protein motif:HMM:NF017072.2
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF019507.2
COORDINATES: protein motif:HMM:NF027484.2
COORDINATES: protein motif:HMM:TIGR00254.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: protein motif:HMM:NF013508.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560851.1
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:TIGR00087.1
GO:0008254 - 3'-nucleotidase activity [Evidence IEA]; GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559352.1
COORDINATES: protein motif:HMM:TIGR00634.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:TIGR00372.1
GO:0004518 - nuclease activity [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559052.1
COORDINATES: protein motif:HMM:TIGR00621.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF028519.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560852.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558479.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF014003.2
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF019121.2
COORDINATES: similar to AA sequence:RefSeq:WP_004111744.1
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF022112.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559204.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: protein motif:HMM:NF014164.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561253.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase, degradative
COORDINATES: similar to AA sequence:RefSeq:WP_013561252.1
COORDINATES: protein motif:HMM:NF012336.2
Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF025626.2
COORDINATES: protein motif:HMM:NF037170.2
COORDINATES: protein motif:HMM:NF040521.1
C45 family autoproteolytic acyltransferase/hydolase
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: protein motif:HMM:NF013933.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00050
FMN riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013559176.1
COORDINATES: protein motif:HMM:NF024772.2
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559174.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560933.1
GO:0000310 - xanthine phosphoribosyltransferase activity [Evidence IEA]
GO:0046110 - xanthine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561332.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF019322.2
COORDINATES: protein motif:HMM:NF002805.0
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: protein motif:HMM:TIGR00221.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: protein motif:HMM:NF013539.2
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025050.2
COORDINATES: protein motif:HMM:NF012678.2
COORDINATES: protein motif:HMM:TIGR01069.1
GO:0030983 - mismatched DNA binding [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003640.0
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: protein motif:HMM:TIGR02937.1
COORDINATES: protein motif:HMM:NF014679.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560915.1
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF012742.2
LacI family DNA-binding transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00410.1
GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]
COORDINATES: protein motif:HMM:NF023401.2
COORDINATES: protein motif:HMM:NF014368.2
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF014326.2
PTS lactose/cellobiose transporter subunit IIA
COORDINATES: protein motif:HMM:NF013227.2
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:TIGR01774.1
GO:0003824 - catalytic activity [Evidence IEA]
formate C-acetyltransferase/glycerol dehydratase family glycyl radical enzyme
COORDINATES: protein motif:HMM:TIGR02494.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0043687 - post-translational protein modification [Evidence IEA]
glycyl-radical enzyme activating protein
COORDINATES: protein motif:HMM:NF012880.2
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
alpha-ketoacid dehydrogenase subunit alpha/beta
COORDINATES: protein motif:HMM:TIGR01350.1
COORDINATES: protein motif:HMM:NF012424.2
dihydrolipoamide acetyltransferase family protein
COORDINATES: protein motif:HMM:NF012579.2
COORDINATES: protein motif:HMM:NF014798.2
transketolase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012670.2
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: protein motif:HMM:NF012669.2
DeoR/GlpR family DNA-binding transcription regulator
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]; GO:0008982 - protein-N(PI)-phosphohistidine-sugar phosphotransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:TIGR01427.1
GO:0022877 - protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity [Evidence IEA]
fructose-specific PTS transporter subunit EIIC
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558744.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:TIGR04256.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560850.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559056.1
COORDINATES: protein motif:HMM:TIGR00663.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013491.2
PEP/pyruvate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024091.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011303857.1
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: similar to AA sequence:RefSeq:WP_013558598.1
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: similar to AA sequence:RefSeq:WP_013558600.1
R3H domain-containing nucleic acid-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558601.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: protein motif:HMM:NF024760.2
GO:0070007 - glutamic-type endopeptidase activity [Evidence IEA]
PrsW family glutamic-type intramembrane protease
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:TIGR00149.1
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: similar to AA sequence:RefSeq:WP_013560855.1
COORDINATES: protein motif:HMM:NF017807.2
COORDINATES: protein motif:HMM:NF024273.2
COORDINATES: protein motif:HMM:NF017015.2
maleylpyruvate isomerase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF006718.0
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: protein motif:HMM:NF024988.2
COORDINATES: protein motif:HMM:NF013116.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561327.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01128.1
COORDINATES: protein motif:HMM:NF039426.1
COORDINATES: similar to AA sequence:RefSeq:WP_002477499.1
COORDINATES: protein motif:HMM:NF012301.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF025559.2
L-2-amino-thiazoline-4-carboxylic acid hydrolase
COORDINATES: protein motif:HMM:NF024141.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558883.1
ATP-dependent Clp protease ATP-binding subunit
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560866.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: protein motif:HMM:TIGR02290.1
COORDINATES: protein motif:HMM:NF013843.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561206.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561207.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561437.1
COORDINATES: protein motif:HMM:NF015692.2
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF009466.0
COORDINATES: protein motif:HMM:NF012335.2
alcohol dehydrogenase catalytic domain-containing protein
COORDINATES: protein motif:HMM:NF015568.2
COORDINATES: protein motif:HMM:NF005556.0
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
COORDINATES: protein motif:HMM:NF037015.2
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: protein motif:HMM:NF025343.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013560167.1
COORDINATES: protein motif:HMM:NF016013.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561270.1
GO:0008878 - glucose-1-phosphate adenylyltransferase activity [Evidence IEA]
GO:0005978 - glycogen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561492.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558532.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558531.1
COORDINATES: protein motif:HMM:NF015500.2
COORDINATES: protein motif:HMM:NF006126.0
GO:0008998 - ribonucleoside-triphosphate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02495.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: protein motif:HMM:NF012958.2
COORDINATES: protein motif:HMM:TIGR00135.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558748.1
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA
COORDINATES: protein motif:HMM:NF013832.2
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: protein motif:HMM:NF021485.2
COORDINATES: protein motif:HMM:NF019314.2
COORDINATES: protein motif:HMM:TIGR02289.1
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: protein motif:HMM:NF014051.2
COORDINATES: similar to AA sequence:RefSeq:WP_002075262.1
type B chloramphenicol O-acetyltransferase
COORDINATES: protein motif:HMM:NF025953.2
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012745.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_002448057.1
GO:0045148 - tripeptide aminopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024575.2
DNA polymerase III subunit delta' C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024241.2
major facilitator superfamily domain-containing protein 6
COORDINATES: similar to AA sequence:RefSeq:WP_013558716.1
COORDINATES: protein motif:HMM:NF013755.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560932.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013357.2
GO:0003796 - lysozyme activity [Evidence IEA]
GO:0016998 - cell wall macromolecule catabolic process [Evidence IEA]; GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561250.1
Zn-ribbon domain-containing OB-fold protein
COORDINATES: protein motif:HMM:NF019614.2
COORDINATES: protein motif:HMM:NF024867.2
COORDINATES: protein motif:HMM:NF025027.2
COORDINATES: protein motif:HMM:NF022633.2
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF014505.2
type II toxin-antitoxin system PemK/MazF family toxin
COORDINATES: similar to AA sequence:RefSeq:WP_013561354.1
COORDINATES: protein motif:HMM:NF012371.2
COORDINATES: protein motif:HMM:NF013053.2
isochorismatase family cysteine hydrolase
COORDINATES: protein motif:HMM:NF015448.2
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
phenylalanine--tRNA ligase beta subunit-related protein
ferric reductase-like transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF014477.2
COORDINATES: protein motif:HMM:NF015378.2
COORDINATES: protein motif:HMM:NF025601.2
COORDINATES: protein motif:HMM:TIGR00730.1
COORDINATES: protein motif:HMM:NF022641.2
COORDINATES: protein motif:HMM:NF028237.2
GO:0009975 - cyclase activity [Evidence IEA]
GO:0009966 - regulation of signal transduction [Evidence IEA]
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561054.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561262.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559927.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024627.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF024571.2
COORDINATES: similar to AA sequence:RefSeq:WP_005576373.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016370.2
COORDINATES: protein motif:HMM:NF013695.2
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF020397.2
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF013989.2
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF027433.2
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:NF014628.2
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:NF018663.2
COORDINATES: protein motif:HMM:TIGR03987.1
COORDINATES: protein motif:HMM:NF014912.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558756.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558757.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013558758.1
GO:1990610 - acetolactate synthase regulator activity [Evidence IEA]
GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558759.1
GO:0004455 - ketol-acid reductoisomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558760.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0019752 - carboxylic acid metabolic process [Evidence IEA]; GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558762.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013558763.1
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013558764.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558765.1
GO:0003862 - 3-isopropylmalate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005146.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF009475.0
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF009455.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
carbamoyl-phosphate synthase large subunit
zinc-dependent alcohol dehydrogenase family protein
COORDINATES: protein motif:HMM:NF012589.2
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: protein motif:HMM:NF002203.0
GO:0008740 - L-rhamnose isomerase activity [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]
GO:0019299 - rhamnose metabolic process [Evidence IEA]
bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase
COORDINATES: protein motif:HMM:NF016107.2
GO:0004671 - protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity [Evidence IEA]
GO:0006481 - C-terminal protein methylation [Evidence IEA]
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561500.1
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561497.1
COORDINATES: protein motif:HMM:TIGR01490.1
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013424.2
undecaprenyl diphosphate synthase family protein
COORDINATES: protein motif:HMM:NF024799.2
sugar ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF014684.2
sugar ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF009709.0
COORDINATES: protein motif:HMM:NF025019.2
COORDINATES: protein motif:HMM:NF022062.2
COORDINATES: protein motif:HMM:NF012907.2
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016144.2
COORDINATES: protein motif:HMM:TIGR00654.1
PhzF family phenazine biosynthesis protein
COORDINATES: protein motif:HMM:NF016178.2
COORDINATES: protein motif:HMM:TIGR00035.1
aspartate/glutamate racemase family protein
COORDINATES: protein motif:HMM:NF007493.0
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: protein motif:HMM:NF025475.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561336.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561065.1
COORDINATES: protein motif:HMM:NF014724.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:NF012955.2
N-acyl homoserine lactonase family protein
COORDINATES: protein motif:HMM:NF013381.2
uroporphyrinogen decarboxylase family protein
COORDINATES: protein motif:HMM:NF004559.0
COORDINATES: protein motif:HMM:NF014136.2
GO:0047869 - dimethylpropiothetin dethiomethylase activity [Evidence IEA]
dimethylsulfonioproprionate lyase family protein
COORDINATES: protein motif:HMM:NF013429.2
sugar phosphate isomerase/epimerase family protein
COORDINATES: protein motif:HMM:NF022805.2
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: protein motif:HMM:NF014375.2
COORDINATES: protein motif:HMM:NF015999.2
COORDINATES: protein motif:HMM:NF025053.2
protein phosphatase 2C domain-containing protein
COORDINATES: protein motif:HMM:NF028007.2
COORDINATES: protein motif:HMM:NF027890.2
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013559304.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559192.1
COORDINATES: protein motif:HMM:TIGR01730.1
COORDINATES: protein motif:HMM:NF039198.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558934.1
COORDINATES: protein motif:HMM:NF012457.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
cytochrome c biogenesis CcdA family protein
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: protein motif:HMM:TIGR00577.1
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0019104 - DNA N-glycosylase activity [Evidence IEA]; GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
COORDINATES: similar to AA sequence:RefSeq:WP_013559685.1
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: protein motif:HMM:NF003483.0
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559688.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:1903826 - L-arginine transmembrane transport [Evidence IEA]; GO:0015819 - lysine transport [Evidence IEA]; GO:0015822 - ornithine transport [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_013559689.1
cobalamin B12-binding domain-containing protein
COORDINATES: protein motif:HMM:NF016071.2
pre-peptidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560969.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013560970.1
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF024573.2
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: protein motif:HMM:NF012905.2
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: protein motif:HMM:NF012869.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558636.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559480.1
COORDINATES: protein motif:HMM:NF027787.2
DPP IV N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF022441.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558522.1
COORDINATES: protein motif:HMM:TIGR02206.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558842.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558840.1
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558966.1
GO:0016407 - acetyltransferase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: protein motif:HMM:NF024871.2
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558572.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559310.1
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559291.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_013559289.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00613.1
COORDINATES: protein motif:HMM:NF013286.2
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: protein motif:HMM:NF014689.2
manganese efflux pump MntP family protein
COORDINATES: protein motif:HMM:NF013242.2
COORDINATES: protein motif:HMM:NF012592.2
COORDINATES: protein motif:HMM:NF008823.0
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF006920.0
COORDINATES: protein motif:HMM:NF002231.0
putative N-acetylmannosamine-6-phosphate 2-epimerase
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF024701.2
COORDINATES: protein motif:HMM:NF012428.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558537.1
NAD/NADP-dependent octopine/nopaline dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558538.1
COORDINATES: protein motif:HMM:TIGR01910.1
autoinducer 2 ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF018757.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559504.1
COORDINATES: protein motif:HMM:NF014420.2
energy-coupling factor transporter transmembrane component T
COORDINATES: protein motif:HMM:TIGR04520.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
energy-coupling factor transporter ATPase
COORDINATES: protein motif:HMM:NF013607.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560509.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560510.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559708.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559709.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_013559711.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559712.1
COORDINATES: protein motif:HMM:NF037660.2
COORDINATES: protein motif:HMM:TIGR00236.1
GO:0008761 - UDP-N-acetylglucosamine 2-epimerase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]
UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
COORDINATES: protein motif:HMM:NF012360.2
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:TIGR03026.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0003979 - UDP-glucose 6-dehydrogenase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF002016.0
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: protein motif:HMM:NF033611.0
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: protein motif:HMM:NF017885.2
COORDINATES: protein motif:HMM:NF016121.2
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF012298.2
GO:0004672 - protein kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00704.1
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: protein motif:HMM:NF013222.2
bifunctional transcriptional activator/DNA repair protein Ada
COORDINATES: similar to AA sequence:RefSeq:WP_016290028.1
COORDINATES: similar to AA sequence:RefSeq:WP_016290027.1
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: similar to AA sequence:RefSeq:WP_005875762.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017959.2
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559780.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559779.1
GO:0008741 - ribulokinase activity [Evidence IEA]
GO:0019568 - arabinose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559778.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292992.1
GO:0008733 - L-arabinose isomerase activity [Evidence IEA]
GO:0005996 - monosaccharide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: protein motif:HMM:TIGR00030.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561200.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561203.1
dihydroorotate dehydrogenase-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561204.1
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016903 - oxidoreductase activity, acting on the aldehyde or oxo group of donors [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0022900 - electron transport chain [Evidence IEA]
pyruvate:ferredoxin (flavodoxin) oxidoreductase
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559364.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558541.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF021758.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558539.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561493.1
phosphoglucomutase/phosphomannomutase family protein
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561526.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561527.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561528.1
COORDINATES: protein motif:HMM:TIGR03725.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: protein motif:HMM:TIGR00150.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_013558501.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017879.2
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558497.1
COORDINATES: protein motif:HMM:TIGR00131.1
GO:0004335 - galactokinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558496.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013558578.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF019559.2
COORDINATES: protein motif:HMM:NF014627.2
formylglycine-generating enzyme family protein
thrombospondin type-1 domain-containing protein
COORDINATES: protein motif:HMM:NF015149.2
GO:0006011 - UDP-glucose metabolic process [Evidence IEA]
cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:TIGR01003.1
COORDINATES: protein motif:HMM:NF012382.2
COORDINATES: protein motif:HMM:NF024629.2
COORDINATES: protein motif:HMM:NF012772.2
GGDEF domain-containing phosphodiesterase
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: protein motif:HMM:NF004051.0
RpiB/LacA/LacB family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF012246.2
GO:0000287 - magnesium ion binding [Evidence IEA]
RuBisCO large subunit C-terminal-like domain-containing protein
COORDINATES: protein motif:HMM:NF013124.2
COORDINATES: protein motif:HMM:TIGR03831.1
COORDINATES: protein motif:HMM:NF015289.2
EutN/CcmL family microcompartment protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559154.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559153.1
GO:0051301 - cell division [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559150.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559149.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559142.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560325.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00689.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: protein motif:HMM:NF021981.2
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558787.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: protein motif:HMM:TIGR00159.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:NF016777.2
COORDINATES: protein motif:HMM:NF016817.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558573.1
COORDINATES: protein motif:HMM:NF019142.2
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_013558810.1
COORDINATES: protein motif:HMM:NF019325.2
COORDINATES: protein motif:HMM:NF024852.2
COORDINATES: protein motif:HMM:NF025687.2
COORDINATES: protein motif:HMM:NF039408.1
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: protein motif:HMM:NF024803.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558542.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
glutamine--tRNA ligase/YqeY domain fusion protein
COORDINATES: protein motif:HMM:NF014081.2
COORDINATES: protein motif:HMM:NF024183.2
COORDINATES: protein motif:HMM:NF024626.2
COORDINATES: protein motif:HMM:NF025691.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: protein motif:HMM:NF014437.2
COORDINATES: protein motif:HMM:NF012578.2
COORDINATES: similar to AA sequence:RefSeq:WP_016290021.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292232.1
COORDINATES: protein motif:HMM:TIGR00167.1
COORDINATES: similar to AA sequence:RefSeq:WP_016292229.1
galactose ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF025150.2
COORDINATES: protein motif:HMM:NF015566.2
COORDINATES: protein motif:HMM:NF015570.2
PTS system mannose/fructose/sorbose family transporter subunit IID
COORDINATES: protein motif:HMM:NF015567.2
COORDINATES: protein motif:HMM:NF015769.2
COORDINATES: protein motif:HMM:NF004489.0
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
GO:0043096 - purine nucleobase salvage [Evidence IEA]
GO:0016746 - acyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018961.2
COORDINATES: protein motif:HMM:NF025380.2
COORDINATES: protein motif:HMM:NF024816.2
COORDINATES: protein motif:HMM:NF012206.1
GO:0005615 - extracellular space [Evidence IEA]
GO:0005509 - calcium ion binding [Evidence IEA]
M10 family metallopeptidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024247.2
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015508711.1
COORDINATES: similar to AA sequence:RefSeq:WP_010720934.1
LysR substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012517.2
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_013561464.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
FumA C-terminus/TtdB family hydratase beta subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013561463.1
prolyl-tRNA synthetase associated domain-containing protein
COORDINATES: protein motif:HMM:NF024881.2
COORDINATES: protein motif:HMM:TIGR02813.1
COORDINATES: protein motif:HMM:NF026115.2
COORDINATES: protein motif:HMM:TIGR02816.1
COORDINATES: protein motif:HMM:NF019589.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560155.1
PfaD family polyunsaturated fatty acid/polyketide biosynthesis protein
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559009.1
COORDINATES: protein motif:HMM:NF006367.0
acetyl-CoA carboxylase biotin carboxylase subunit
COORDINATES: protein motif:HMM:NF012584.2
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit
COORDINATES: protein motif:HMM:TIGR04391.1
COORDINATES: protein motif:HMM:NF013725.2
COORDINATES: protein motif:HMM:NF015344.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0015439 - ABC-type heme transporter activity [Evidence IEA]
GO:0015886 - heme transport [Evidence IEA]
heme ABC exporter ATP-binding protein CcmA
COORDINATES: protein motif:HMM:NF024637.2
COORDINATES: protein motif:HMM:NF027651.2
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
cytochrome c-type biogenesis CcmF C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015085.2
GO:0017004 - cytochrome complex assembly [Evidence IEA]; GO:0017003 - protein-heme linkage [Evidence IEA]
COORDINATES: protein motif:HMM:NF016115.2
GO:0004061 - arylformamidase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
COORDINATES: protein motif:HMM:NF040142.1
glycosyl-4,4'-diaponeurosporenoate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013559120.1
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF014647.2
BMP family ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_016289947.1
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561097.1
COORDINATES: protein motif:HMM:TIGR01509.1
COORDINATES: protein motif:HMM:NF003251.0
type II glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF012389.2
GO:0004618 - phosphoglycerate kinase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033504.1
GO:0050043 - lactate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002443355.1
COORDINATES: protein motif:HMM:NF012257.2
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:NF013335.2
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: protein motif:HMM:NF028222.2
COORDINATES: protein motif:HMM:NF013916.2
COORDINATES: protein motif:HMM:NF016114.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560027.1
GO:0004459 - L-lactate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013918.2
COORDINATES: protein motif:HMM:NF021235.2
COORDINATES: protein motif:HMM:NF014732.2
Wzz/FepE/Etk N-terminal domain-containing protein
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015898.2
BlaI/MecI/CopY family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_010963775.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:NF006667.0
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase complex E1 component subunit beta
COORDINATES: protein motif:HMM:NF017174.2
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: protein motif:HMM:NF020250.2
GO:0016773 - phosphotransferase activity, alcohol group as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559781.1
L-fucose/L-arabinose isomerase family protein
COORDINATES: protein motif:HMM:NF025839.2
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:TIGR03168.1
1-phosphofructokinase family hexose kinase
thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_013559837.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: protein motif:HMM:NF018288.2
glucose-6-phosphate isomerase family protein
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: protein motif:HMM:NF025793.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560118.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560117.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560116.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558936.1
GO:0009045 - xylose isomerase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560872.1
GO:0005515 - protein binding [Evidence IEA]; GO:0004856 - xylulokinase activity [Evidence IEA]
GO:0042732 - D-xylose metabolic process [Evidence IEA]; GO:0005997 - xylulose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:NF013567.2
COORDINATES: protein motif:HMM:NF013345.2
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: protein motif:HMM:NF013481.2
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: protein motif:HMM:NF024644.2
COORDINATES: protein motif:HMM:NF014692.2
COORDINATES: protein motif:HMM:NF024581.2
COORDINATES: protein motif:HMM:NF016328.2
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF021252.2
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF015390.2
carbohydrate binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559955.1
magnesium transporter CorA family protein
COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF000722.0
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02365.1
GO:0004371 - glycerone kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014753.2
COORDINATES: protein motif:HMM:NF016612.2
neutral/alkaline non-lysosomal ceramidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01489.1
COORDINATES: protein motif:HMM:NF025925.2
COORDINATES: protein motif:HMM:TIGR01460.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559582.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00708.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF000996.0
GO:0008939 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [Evidence IEA]
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
COORDINATES: protein motif:HMM:NF014685.2
GO:0008818 - cobalamin 5'-phosphate synthase activity [Evidence IEA]
adenosylcobinamide-GDP ribazoletransferase
COORDINATES: protein motif:HMM:NF041277.1
cobamide remodeling phosphodiesterase CbiR
COORDINATES: protein motif:HMM:NF014351.2
GO:0043752 - adenosylcobinamide kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
COORDINATES: protein motif:HMM:NF019359.2
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF015251.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559637.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559638.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559639.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF014037.2
COORDINATES: protein motif:HMM:TIGR01494.1
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:TIGR00099.1
COORDINATES: protein motif:HMM:NF025589.2
COORDINATES: protein motif:HMM:NF015052.2
COORDINATES: protein motif:HMM:TIGR03436.1
COORDINATES: protein motif:HMM:NF013557.2
COORDINATES: protein motif:HMM:NF020396.2
COORDINATES: protein motif:HMM:NF012406.2
COORDINATES: protein motif:HMM:NF025802.2
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013383.2
COORDINATES: protein motif:HMM:TIGR00383.1
GO:0015087 - cobalt ion transmembrane transporter activity [Evidence IEA]; GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]; GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558968.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558969.1
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: protein motif:HMM:NF012383.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559641.1
GO:0004349 - glutamate 5-kinase activity [Evidence IEA]
GO:0006561 - proline biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559642.1
GO:0004350 - glutamate-5-semialdehyde dehydrogenase activity [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558671.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558670.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0089714 - UDP-N-acetyl-D-mannosamine dehydrogenase activity [Evidence IEA]
GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA]
UDP-N-acetyl-D-mannosamine dehydrogenase
COORDINATES: protein motif:HMM:NF017672.2
GO:0016811 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [Evidence IEA]
GO:0006672 - ceramide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024698.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014479.2
muconolactone Delta-isomerase family protein
COORDINATES: protein motif:HMM:NF004397.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF013828.2
COORDINATES: protein motif:HMM:TIGR01446.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559112.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014618.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559012.1
sodium ion-translocating decarboxylase subunit beta
COORDINATES: protein motif:HMM:NF016187.2
COORDINATES: protein motif:HMM:NF013225.2
COORDINATES: protein motif:HMM:NF019349.2
COORDINATES: protein motif:HMM:NF041098.2
GO:0006020 - inositol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012398.2
COORDINATES: protein motif:HMM:TIGR01505.1
GO:0008679 - 2-hydroxy-3-oxopropionate reductase activity [Evidence IEA]
GO:0019580 - galactarate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF022338.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559271.1
COORDINATES: protein motif:HMM:NF036822.2
COORDINATES: protein motif:HMM:NF002003.0
GO:0003905 - alkylbase DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03904.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017743.2
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF007853.0
COORDINATES: similar to AA sequence:RefSeq:WP_013559732.1
COORDINATES: protein motif:HMM:NF024835.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561272.1
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560753.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016213.2
COORDINATES: protein motif:HMM:NF036772.2
COORDINATES: protein motif:HMM:NF014672.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561422.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_013561423.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561424.1
COORDINATES: protein motif:HMM:NF024642.2
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: protein motif:HMM:NF001503.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF023128.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561103.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:TIGR00089.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF015013.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558488.1
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF013570.2
COORDINATES: protein motif:HMM:NF024865.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF039823.1
COORDINATES: protein motif:HMM:NF016535.2
sensor domain-containing diguanylate cyclase
COORDINATES: protein motif:HMM:NF013862.2
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:TIGR00685.1
GO:0004805 - trehalose-phosphatase activity [Evidence IEA]
GO:0005992 - trehalose biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013173.2
COORDINATES: protein motif:HMM:NF013377.2
GO:0004555 - alpha,alpha-trehalase activity [Evidence IEA]
GO:0005991 - trehalose metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560747.1
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: protein motif:HMM:NF016826.2
GO:0016861 - intramolecular oxidoreductase activity, interconverting aldoses and ketoses [Evidence IEA]
GO:0019310 - inositol catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR04377.1
GO:0016823 - hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)
COORDINATES: similar to AA sequence:RefSeq:WP_013559138.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: protein motif:HMM:NF025620.2
carbohydrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_017375425.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014624.2
metal-sensitive transcriptional regulator
COORDINATES: protein motif:HMM:TIGR02605.1
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013558767.1
GO:0004664 - prephenate dehydratase activity [Evidence IEA]
GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558618.1
GO:0004106 - chorismate mutase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558619.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012497.2
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013558623.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01357.1
GO:0003856 - 3-dehydroquinate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561316.1
GO:0003855 - 3-dehydroquinate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012304.2
COORDINATES: protein motif:HMM:NF033679.1
COORDINATES: protein motif:HMM:NF012697.2
COORDINATES: protein motif:HMM:TIGR03852.1
GO:0004645 - 1,4-alpha-oligoglucan phosphorylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017280.2
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:TIGR00745.1
COORDINATES: protein motif:HMM:NF012377.2
GO:0071704 - organic substance metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: protein motif:HMM:NF025819.2
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF020419.2
nucleotidyl transferase AbiEii/AbiGii toxin family protein
COORDINATES: protein motif:HMM:NF025186.2
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF024139.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:NF012652.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF016828.2
COORDINATES: protein motif:HMM:NF019428.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559818.1
COORDINATES: protein motif:HMM:NF017085.2
COORDINATES: protein motif:HMM:NF014299.2
COORDINATES: protein motif:HMM:TIGR00041.1
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_004810563.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR00974.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02138.1
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR02136.1
phosphate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558608.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558609.1
COORDINATES: protein motif:HMM:NF019552.2
COORDINATES: protein motif:HMM:NF019265.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560908.1
4Fe-4S cluster-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559758.1
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: protein motif:HMM:NF018178.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560740.1
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013560739.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560738.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560737.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF020067.2
FtsQ-type POTRA domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560735.1
D-alanine--D-alanine ligase family protein
COORDINATES: protein motif:HMM:NF010480.0
GO:0071949 - FAD binding [Evidence IEA]; GO:0008762 - UDP-N-acetylmuramate dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014704.2
GO:0009403 - toxin biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01133.1
GO:0050511 - undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity [Evidence IEA]
undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
COORDINATES: protein motif:HMM:NF013279.2
putative peptidoglycan glycosyltransferase FtsW
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: similar to AA sequence:RefSeq:WP_013560727.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: similar to AA sequence:RefSeq:WP_013560723.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: protein motif:HMM:TIGR00242.1
GO:0043565 - sequence-specific DNA binding [Evidence IEA]
GO:0051302 - regulation of cell division [Evidence IEA]
division/cell wall cluster transcriptional repressor MraZ
COORDINATES: protein motif:HMM:NF012481.2
COORDINATES: protein motif:HMM:NF038017.1
COORDINATES: protein motif:HMM:NF024257.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01055
molybdenum cofactor riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013183.2
COORDINATES: protein motif:HMM:TIGR02666.1
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002465428.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF011068.0
GO:0032324 - molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: protein motif:HMM:NF036525.2
COORDINATES: protein motif:HMM:NF012372.2
COORDINATES: protein motif:HMM:NF013964.2
HNH endonuclease signature motif containing protein
COORDINATES: protein motif:HMM:TIGR00632.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560171.1
YifB family Mg chelatase-like AAA ATPase
COORDINATES: protein motif:HMM:NF024915.2
outer membrane protein assembly factor BamD
COORDINATES: protein motif:HMM:NF013234.2
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF016840.2
COORDINATES: protein motif:HMM:TIGR01382.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: protein motif:HMM:NF040696.1
protein-S-isoprenylcysteine O-methyltransferase
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF002806.0
GO:0004756 - selenide, water dikinase activity [Evidence IEA]
GO:0001887 - selenium compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019262.2
COORDINATES: protein motif:HMM:TIGR03709.1
COORDINATES: protein motif:HMM:NF018024.2
COORDINATES: protein motif:HMM:NF022137.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560038.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560040.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: similar to AA sequence:RefSeq:WP_001686914.1
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF013932.2
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:TIGR03592.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: protein motif:HMM:NF024483.2
RNA-binding cell elongation regulator Jag/EloR
COORDINATES: similar to AA sequence:RefSeq:WP_013560680.1
GO:0016154 - pyrimidine-nucleoside phosphorylase activity [Evidence IEA]
GO:0006213 - pyrimidine nucleoside metabolic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00230
T-box leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013560678.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014088.2
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559406.1
GO:0016829 - lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559409.1
COORDINATES: protein motif:HMM:NF012784.2
COORDINATES: protein motif:HMM:NF013727.2
COORDINATES: protein motif:HMM:NF013915.2
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0009249 - protein lipoylation [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: similar to AA sequence:RefSeq:WP_013559419.1
COORDINATES: protein motif:HMM:TIGR00234.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
FtsW/RodA/SpoVE family cell cycle protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559561.1
GO:0017061 - S-methyl-5-thioadenosine phosphorylase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: protein motif:HMM:NF012708.2
COORDINATES: protein motif:HMM:NF014058.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559557.1
COORDINATES: protein motif:HMM:NF038032.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559553.1
peptide ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR00636.1
COORDINATES: protein motif:HMM:NF015291.2
GH3 auxin-responsive promoter family protein
COORDINATES: protein motif:HMM:NF024883.2
COORDINATES: protein motif:HMM:NF025716.2
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559807.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559808.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559811.1
COORDINATES: similar to AA sequence:RefSeq:WP_003127365.1
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: protein motif:HMM:NF027495.2
BtrH N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025444.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561080.1
GO:0004000 - adenosine deaminase activity [Evidence IEA]
GO:0009168 - purine ribonucleoside monophosphate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560036.1
GO:0004735 - pyrroline-5-carboxylate reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014703.2
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00430.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: protein motif:HMM:NF015000.2
GO:0008081 - phosphoric diester hydrolase activity [Evidence IEA]
GO:0006629 - lipid metabolic process [Evidence IEA]
glycerophosphodiester phosphodiesterase family protein
COORDINATES: protein motif:HMM:NF013126.2
glycoside hydrolase family 3 N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559752.1
COORDINATES: protein motif:HMM:NF025711.2
COORDINATES: protein motif:HMM:TIGR01826.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559744.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_013559743.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561282.1
COORDINATES: protein motif:HMM:NF003367.0
COORDINATES: similar to AA sequence:RefSeq:WP_013559660.1
aspartate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559661.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559662.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_013559251.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559664.1
GO:0019878 - lysine biosynthetic process via aminoadipic acid [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558769.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559742.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00456.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559740.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559739.1
COORDINATES: protein motif:HMM:NF000840.1
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF017368.2
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560412.1
GO:0019180 - dTDP-4-amino-4,6-dideoxygalactose transaminase activity [Evidence IEA]
dTDP-4-amino-4,6-dideoxygalactose transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_013560410.1
COORDINATES: similar to AA sequence:RefSeq:WP_002221803.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: similar to AA sequence:RefSeq:WP_013561304.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
GO:0006282 - regulation of DNA repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03319.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003556.0
GO:0003871 - 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0008652 - amino acid biosynthetic process [Evidence IEA]; GO:0009086 - methionine biosynthetic process [Evidence IEA]
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF015956.2
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00500.1
COORDINATES: protein motif:HMM:NF024748.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561519.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00611.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00138.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
COORDINATES: protein motif:HMM:TIGR01549.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559490.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF020039.2
SMP-30/gluconolactonase/LRE family protein
COORDINATES: protein motif:HMM:NF006695.0
GO:0004516 - nicotinate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015181.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
molybdopterin-guanine dinucleotide biosynthesis protein B
type II CAAX endopeptidase family protein
COORDINATES: protein motif:HMM:NF012618.2
COORDINATES: protein motif:HMM:NF021507.2
phosphodiester glycosidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560152.1
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase
COORDINATES: similar to AA sequence:RefSeq:WP_013560153.1
GO:0008899 - homoserine O-succinyltransferase activity [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00162
SAM riboswitch class I; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013559783.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559785.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013559786.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: protein motif:HMM:TIGR00084.1
GO:0009379 - Holliday junction helicase complex [Evidence IEA]
GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_013559793.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560923.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560922.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:TIGR01993.1
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF001753.0
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00350.1
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF018004.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560010.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560009.1
COORDINATES: protein motif:HMM:TIGR02273.1
GO:0006364 - rRNA processing [Evidence IEA]
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00732.1
GO:0009294 - DNA-mediated transformation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560005.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560003.1
COORDINATES: protein motif:HMM:NF040647.1
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559999.1
decaprenyl-phosphate phosphoribosyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013559998.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559997.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: protein motif:HMM:TIGR03662.1
COORDINATES: protein motif:HMM:NF021570.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559505.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015536.2
GO:0070004 - cysteine-type exopeptidase activity [Evidence IEA]; GO:0016805 - dipeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559510.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: protein motif:HMM:TIGR00191.1
GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013085328.1
GO:0004795 - threonine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00536.1
GO:0018364 - peptidyl-glutamine methylation [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
peptide chain release factor N(5)-glutamine methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_003202249.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560661.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560660.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560658.1
COORDINATES: protein motif:HMM:TIGR03025.1
COORDINATES: protein motif:HMM:NF014740.2
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: protein motif:HMM:NF014445.2
GO:0016755 - aminoacyltransferase activity [Evidence IEA]
GO:0044038 - cell wall macromolecule biosynthetic process [Evidence IEA]
peptidoglycan bridge formation glycyltransferase FemA/FemB family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560649.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558856.1
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559292.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00013
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF021592.2
YhfC family glutamic-type intramembrane protease
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF012364.2
DNA polymerase domain-containing protein
COORDINATES: protein motif:HMM:NF014626.2
COORDINATES: protein motif:HMM:NF024092.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559513.1
COORDINATES: protein motif:HMM:NF015084.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559528.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559896.1
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF000586.1
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014601.2
2-dehydropantoate 2-reductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560469.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560640.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025002.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560637.1
COORDINATES: protein motif:HMM:TIGR00166.1
COORDINATES: protein motif:HMM:TIGR00266.1
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559762.1
COORDINATES: protein motif:HMM:NF014886.2
pyruvate kinase alpha/beta domain-containing protein
COORDINATES: protein motif:HMM:NF014805.2
COORDINATES: protein motif:HMM:TIGR01376.1
choice-of-anchor Q domain-containing protein
COORDINATES: protein motif:HMM:NF014758.2
xanthine dehydrogenase family protein molybdopterin-binding subunit
COORDINATES: protein motif:HMM:NF013923.2
COORDINATES: protein motif:HMM:TIGR02033.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017464543.1
COORDINATES: protein motif:HMM:NF016143.2
COORDINATES: protein motif:HMM:NF025653.2
COORDINATES: protein motif:HMM:NF027567.2
pyridoxamine 5'-phosphate oxidase family protein
COORDINATES: protein motif:HMM:NF017239.2
PqqD family peptide modification chaperone
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559957.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559956.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559795.1
COORDINATES: protein motif:HMM:NF013380.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014615.2
homocysteine S-methyltransferase family protein
COORDINATES: protein motif:HMM:TIGR00937.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559857.1
COORDINATES: protein motif:HMM:NF020650.2
COORDINATES: protein motif:HMM:TIGR02512.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0009055 - electron transfer activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016695 - oxidoreductase activity, acting on hydrogen as donor [Evidence IEA]
COORDINATES: protein motif:HMM:NF013426.2
NADH-ubiquinone oxidoreductase-F iron-sulfur binding region domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560274.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015912.2
RNA polymerase sigma factor region1.1 domain-containing protein
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: protein motif:HMM:NF015925.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560263.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560262.1
GO:0004345 - glucose-6-phosphate dehydrogenase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560256.1
COORDINATES: protein motif:HMM:NF006871.0
COORDINATES: protein motif:HMM:NF015679.2
COORDINATES: protein motif:HMM:NF014619.2
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559921.1
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559920.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559529.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013559232.1
COORDINATES: protein motif:HMM:NF012759.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_009269230.1
COORDINATES: similar to AA sequence:RefSeq:WP_002576322.1
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559581.1
GO:0006002 - fructose 6-phosphate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559584.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: protein motif:HMM:NF016060.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559589.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559592.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00093.1
COORDINATES: protein motif:HMM:TIGR00182.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00010.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559882.1
COORDINATES: protein motif:HMM:TIGR00420.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020287.2
COORDINATES: protein motif:HMM:NF007980.0
GO:0010945 - CoA pyrophosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00731.1
GO:0008097 - 5S rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012570.2
COORDINATES: protein motif:HMM:TIGR01098.1
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR02315.1
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:TIGR01097.1
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: protein motif:HMM:TIGR00765.1
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF020416.2
COORDINATES: protein motif:HMM:NF015721.2
Asp23/Gls24 family envelope stress response protein
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: protein motif:HMM:NF024873.2
ribonuclease H-like domain-containing protein
COORDINATES: protein motif:HMM:NF024214.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559861.1
COORDINATES: protein motif:HMM:NF013134.2
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559855.1
COORDINATES: protein motif:HMM:NF014085.2
GO:0043814 - phospholactate guanylyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01819.1
GO:0043743 - LPPG:FO 2-phospho-L-lactate transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559851.1
GO:0043773 - coenzyme F420-0 gamma-glutamyl ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559850.1
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
COORDINATES: protein motif:HMM:NF005540.0
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF006053.0
COORDINATES: protein motif:HMM:NF018798.2
COORDINATES: protein motif:HMM:NF020977.2
COORDINATES: protein motif:HMM:NF019317.2
COORDINATES: protein motif:HMM:TIGR00043.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013391.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561389.1
COORDINATES: protein motif:HMM:TIGR00633.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560232.1
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560234.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559932.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559933.1
COORDINATES: protein motif:HMM:TIGR03599.1
COORDINATES: protein motif:HMM:NF008168.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559938.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:TIGR00763.1
COORDINATES: protein motif:HMM:TIGR01499.1
folylpolyglutamate synthase/dihydrofolate synthase family protein
COORDINATES: protein motif:HMM:NF016351.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560645.1
COORDINATES: protein motif:HMM:TIGR03960.1
TIGR03960 family B12-binding radical SAM protein
COORDINATES: protein motif:HMM:TIGR03936.1
TIGR03936 family radical SAM-associated protein
COORDINATES: protein motif:HMM:NF015239.2
COORDINATES: protein motif:HMM:NF001986.0
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560214.1
GO:0004587 - ornithine-oxo-acid transaminase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004978.0
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560217.1
2-oxoacid:ferredoxin oxidoreductase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_013560218.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF014625.2
COORDINATES: protein motif:HMM:NF041131.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: similar to AA sequence:RefSeq:WP_013560223.1
COORDINATES: protein motif:HMM:NF024135.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560041.1
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: nucleotide motif:Rfam:14.4:RF00504
glycine riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013560083.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560084.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPA
COORDINATES: similar to AA sequence:RefSeq:WP_013560085.1
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: protein motif:HMM:TIGR00344.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025910.2
COORDINATES: protein motif:HMM:NF025885.2
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:TIGR02395.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: protein motif:HMM:NF003739.0
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
COORDINATES: similar to AA sequence:RefSeq:WP_013560101.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560103.1
COORDINATES: protein motif:HMM:TIGR01129.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00966.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560060.1
COORDINATES: protein motif:HMM:NF025042.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560063.1
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560066.1
COORDINATES: protein motif:HMM:TIGR00048.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: similar to AA sequence:RefSeq:WP_113918868.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF002872.1
COORDINATES: protein motif:HMM:NF014653.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560073.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: protein motif:HMM:TIGR00464.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01215.1
GO:0000910 - cytokinesis [Evidence IEA]; GO:0000918 - division septum site selection [Evidence IEA]
cell division topological specificity factor MinE
COORDINATES: similar to AA sequence:RefSeq:WP_013559399.1
GO:0000918 - division septum site selection [Evidence IEA]
COORDINATES: protein motif:HMM:NF015716.2
COORDINATES: protein motif:HMM:TIGR03423.1
COORDINATES: protein motif:HMM:TIGR00219.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559394.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559608.1
COORDINATES: protein motif:HMM:NF010167.0
COORDINATES: protein motif:HMM:NF018816.2
COORDINATES: protein motif:HMM:TIGR02228.1
COORDINATES: protein motif:HMM:NF012573.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559666.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559665.1
GO:0004056 - argininosuccinate lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558517.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012531.2
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012975.2
GO:0004540 - ribonuclease activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014586.2
COORDINATES: protein motif:HMM:NF012475.2
COORDINATES: protein motif:HMM:TIGR01511.1
GO:0005375 - copper ion transmembrane transporter activity [Evidence IEA]; GO:0043682 - P-type divalent copper transporter activity [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015402.2
energy-coupling factor ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560275.1
glycoside hydrolase family 3 C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561229.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561230.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561231.1
COORDINATES: similar to AA sequence:RefSeq:WP_001014314.1
GO:0003674 - molecular_function [Evidence IEA]
COORDINATES: protein motif:HMM:NF024061.2
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF018753.2
COORDINATES: protein motif:HMM:NF014826.2
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: similar to AA sequence:RefSeq:WP_013560183.1
(2Fe-2S) ferredoxin domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560184.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0010181 - FMN binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: similar to AA sequence:RefSeq:WP_013560185.1
NADH-quinone oxidoreductase subunit NuoE
COORDINATES: similar to AA sequence:RefSeq:WP_013560186.1
COORDINATES: protein motif:HMM:NF012602.2
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559392.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559391.1
COORDINATES: protein motif:HMM:TIGR00100.1
GO:0008901 - ferredoxin hydrogenase activity [Evidence IEA]
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: similar to AA sequence:RefSeq:WP_013560189.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: protein motif:HMM:TIGR00143.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00074.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_013560192.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560193.1
hydrogenase expression/formation protein HypE
COORDINATES: similar to AA sequence:RefSeq:WP_013560197.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560198.1
COORDINATES: protein motif:HMM:NF013614.2
SufD family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560201.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560202.1
COORDINATES: protein motif:HMM:NF024804.2
winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF013999.2
COORDINATES: protein motif:HMM:TIGR00545.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560208.1
pyridoxal phosphate-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560209.1
COORDINATES: protein motif:HMM:NF012562.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560211.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560212.1
GO:0004802 - transketolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002485948.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559682.1
GO:0005507 - copper ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00526.1
GO:0004150 - dihydroneopterin aldolase activity [Evidence IEA]
GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013456.2
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: protein motif:HMM:NF006826.0
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA]; GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560447.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_013560452.1
GO:0000036 - acyl carrier activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560453.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560454.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: protein motif:HMM:NF024813.2
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: similar to AA sequence:RefSeq:WP_013560482.1
COORDINATES: protein motif:HMM:NF019982.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560485.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF024304.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560487.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:NF009154.0
GO:0004518 - nuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013654.2
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560761.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560762.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: protein motif:HMM:TIGR00007.1
GO:0003949 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase activity [Evidence IEA]
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase
COORDINATES: protein motif:HMM:TIGR01855.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: protein motif:HMM:NF002111.0
imidazoleglycerol-phosphate dehydratase HisB
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560767.1
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00070.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560501.1
COORDINATES: protein motif:HMM:TIGR02095.1
COORDINATES: protein motif:HMM:TIGR00217.1
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002387688.1
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015607.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560618.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0016667 - oxidoreductase activity, acting on a sulfur group of donors [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]
protein-methionine-sulfoxide reductase catalytic subunit MsrP
protein-methionine-sulfoxide reductase heme-binding subunit MsrQ
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560129.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560132.1
enoyl-[acyl-carrier-protein] reductase FabL
COORDINATES: similar to AA sequence:RefSeq:WP_013560135.1
COORDINATES: protein motif:HMM:NF017984.2
crosslink repair DNA glycosylase YcaQ family protein
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:TIGR00065.1
COORDINATES: protein motif:HMM:NF007914.0
COORDINATES: protein motif:HMM:NF018508.2
COORDINATES: protein motif:HMM:TIGR04105.1
COORDINATES: protein motif:HMM:NF014904.2
[Fe-Fe] hydrogenase large subunit C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013775.2
aminoglycoside phosphotransferase family protein
COORDINATES: protein motif:HMM:NF010378.0
GO:0004022 - alcohol dehydrogenase (NAD+) activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0006066 - alcohol metabolic process [Evidence IEA]; GO:0015976 - carbon utilization [Evidence IEA]
bifunctional acetaldehyde-CoA/alcohol dehydrogenase
COORDINATES: protein motif:HMM:NF003996.0
redox-sensing transcriptional repressor Rex
COORDINATES: protein motif:HMM:NF012354.2
COORDINATES: protein motif:HMM:NF001965.0
GO:0000156 - phosphorelay response regulator activity [Evidence IEA]; GO:0008984 - protein-glutamate methylesterase activity [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
chemotaxis-specific protein-glutamate methyltransferase CheB
COORDINATES: protein motif:HMM:NF012245.2
HAMP domain-containing methyl-accepting chemotaxis protein
COORDINATES: protein motif:HMM:NF013731.2
COORDINATES: protein motif:HMM:NF013867.2
protein-glutamate O-methyltransferase CheR
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01240.1
GO:0004163 - diphosphomevalonate decarboxylase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560392.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560394.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560439.1
COORDINATES: protein motif:HMM:NF024143.2
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037959.1
COORDINATES: protein motif:HMM:TIGR01906.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560468.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:NF012488.2
alanine--glyoxylate aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560662.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560663.1
COORDINATES: protein motif:HMM:NF024921.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560504.1
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014602.2
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559250.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559249.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559248.1
COORDINATES: protein motif:HMM:TIGR02146.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561041.1
COORDINATES: protein motif:HMM:NF009555.0
YgeY family selenium metabolism-linked hydrolase
COORDINATES: protein motif:HMM:NF015297.2
COORDINATES: protein motif:HMM:NF020543.2
COORDINATES: protein motif:HMM:NF016668.2
COORDINATES: protein motif:HMM:NF020496.2
COORDINATES: protein motif:HMM:NF038196.1
N-terminal region resembles flavodoxins. C-terminal ferrodoxin region binds two 4Fe-4S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR01065.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559757.1
GO:0008108 - UDP-glucose:hexose-1-phosphate uridylyltransferase activity [Evidence IEA]
UDP-glucose--hexose-1-phosphate uridylyltransferase
COORDINATES: protein motif:HMM:NF040906.2
COORDINATES: similar to AA sequence:RefSeq:WP_008376146.1
COORDINATES: protein motif:HMM:NF040907.1
COORDINATES: protein motif:HMM:NF015380.2
COORDINATES: protein motif:HMM:NF015319.2
COORDINATES: protein motif:HMM:TIGR03022.1
undecaprenyl-phosphate galactose phosphotransferase WbaP
COORDINATES: similar to AA sequence:RefSeq:WP_013560841.1
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF017522.2
TylF/MycF/NovP-related O-methyltransferase
COORDINATES: protein motif:HMM:TIGR01007.1
GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA]
polysaccharide biosynthesis tyrosine autokinase
COORDINATES: protein motif:HMM:NF014417.2
transcription termination/antitermination NusG family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558901.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559891.1
COORDINATES: protein motif:HMM:NF012412.2
COORDINATES: protein motif:HMM:NF019011.2
COORDINATES: protein motif:HMM:NF022635.2
COORDINATES: protein motif:HMM:NF023580.2
COORDINATES: protein motif:HMM:NF024209.2
leucine-rich repeat domain-containing protein
COORDINATES: protein motif:HMM:NF024298.2
COORDINATES: protein motif:HMM:NF019344.2
COORDINATES: protein motif:HMM:NF016119.2
GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]
GO:0045184 - establishment of protein localization [Evidence IEA]; GO:0016485 - protein processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF020032.2
COORDINATES: protein motif:HMM:TIGR01187.1
COORDINATES: protein motif:HMM:TIGR00262.1
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013070.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558584.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF024869.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558733.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560023.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560024.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560025.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: protein motif:HMM:NF012610.2
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: protein motif:HMM:TIGR00711.1
COORDINATES: protein motif:HMM:NF013618.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559833.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016293058.1
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559827.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559826.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015102.2
DNA-directed RNA polymerase subunit alpha C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003151132.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560894.1
COORDINATES: protein motif:HMM:TIGR00061.1
COORDINATES: protein motif:HMM:TIGR00475.1
GO:0001514 - selenocysteine incorporation [Evidence IEA]; GO:0006414 - translational elongation [Evidence IEA]
selenocysteine-specific translation elongation factor
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013558895.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558896.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558897.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013558558.1
GO:0008804 - carbamate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558557.1
COORDINATES: protein motif:HMM:TIGR00670.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558553.1
COORDINATES: protein motif:HMM:NF012621.2
COORDINATES: protein motif:HMM:NF024778.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF022747.2
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: protein motif:HMM:NF018649.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560593.1
cation diffusion facilitator family transporter
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559965.1
B12-binding domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559161.1
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00374.1
COORDINATES: protein motif:HMM:NF013766.2
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: protein motif:HMM:NF004036.0
COORDINATES: protein motif:HMM:NF014635.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558669.1
GO:0004488 - methylenetetrahydrofolate dehydrogenase (NADP+) activity [Evidence IEA]
bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD
COORDINATES: protein motif:HMM:TIGR00104.1
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: similar to AA sequence:RefSeq:WP_013559616.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559615.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: protein motif:HMM:NF025616.2
COORDINATES: protein motif:HMM:NF014156.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560035.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559621.1
GO:0004125 - L-seryl-tRNASec selenium transferase activity [Evidence IEA]
GO:0016260 - selenocysteine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559623.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_013559628.1
COORDINATES: protein motif:HMM:NF012686.2
aldehyde ferredoxin oxidoreductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR01407.1
GO:0004527 - exonuclease activity [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016145.2
polysaccharide pyruvyl transferase family protein
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain
COORDINATES: protein motif:HMM:NF015451.2
COORDINATES: protein motif:HMM:NF025636.2
COORDINATES: protein motif:HMM:NF018234.2
COORDINATES: protein motif:HMM:NF027224.2
COORDINATES: protein motif:HMM:NF024660.2
histidine triad nucleotide-binding protein
COORDINATES: protein motif:HMM:TIGR01587.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016293318.1
type I-C CRISPR-associated protein Cas5c
COORDINATES: protein motif:HMM:TIGR01863.1
type I-C CRISPR-associated protein Cas8c/Csd1
COORDINATES: protein motif:HMM:TIGR02589.1
type I-C CRISPR-associated protein Cas7/Csd2
COORDINATES: similar to AA sequence:RefSeq:WP_013559646.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559645.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0051607 - defense response to virus [Evidence IEA]; GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type I-C CRISPR-associated endonuclease Cas1c
COORDINATES: similar to AA sequence:RefSeq:WP_016293323.1
adenine deaminase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF024907.2
COORDINATES: protein motif:HMM:NF036294.2
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: protein motif:HMM:NF014089.2
COORDINATES: protein motif:HMM:TIGR00245.1
iron export ABC transporter permease subunit FetB
COORDINATES: protein motif:HMM:NF009498.0
COORDINATES: protein motif:HMM:NF019625.2
class II D-tagatose-bisphosphate aldolase, non-catalytic subunit
COORDINATES: protein motif:HMM:NF016054.2
N-acetylmannosamine-6-phosphate 2-epimerase
COORDINATES: similar to AA sequence:RefSeq:WP_016291746.1
COORDINATES: protein motif:HMM:NF003784.0
COORDINATES: protein motif:HMM:NF010037.0
GO:0045454 - cell redox homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00026.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0070967 - coenzyme F420 binding [Evidence IEA]
nitroreductase family deazaflavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559542.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021127.2
COORDINATES: protein motif:HMM:TIGR02024.1
GO:0030412 - formimidoyltetrahydrofolate cyclodeaminase activity [Evidence IEA]; GO:0030409 - glutamate formimidoyltransferase activity [Evidence IEA]
GO:0019556 - histidine catabolic process to glutamate and formamide [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559959.1
COORDINATES: similar to AA sequence:RefSeq:WP_003610350.1
COORDINATES: protein motif:HMM:NF003766.0
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008973 - phosphopentomutase activity [Evidence IEA]
GO:0043094 - cellular metabolic compound salvage [Evidence IEA]; GO:0009117 - nucleotide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013353.2
GO:0036361 - racemase activity, acting on amino acids and derivatives [Evidence IEA]
COORDINATES: protein motif:HMM:NF021463.2
COORDINATES: protein motif:HMM:NF013921.2
COORDINATES: similar to AA sequence:RefSeq:WP_011676756.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558849.1
COORDINATES: protein motif:HMM:NF012707.2
basic amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559696.1
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558701.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558700.1
COORDINATES: protein motif:HMM:NF025869.2
COORDINATES: protein motif:HMM:NF024793.2
COORDINATES: protein motif:HMM:TIGR00418.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00168.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558492.1
COORDINATES: similar to AA sequence:RefSeq:WP_009635878.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: protein motif:HMM:NF013798.2
COORDINATES: protein motif:HMM:NF017019.2
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: protein motif:HMM:NF015368.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561045.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_013561044.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561179.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_013561177.1
COORDINATES: similar to AA sequence:RefSeq:WP_002379894.1
COORDINATES: similar to AA sequence:RefSeq:WP_013561164.1
dihydroorotate dehydrogenase electron transfer subunit
COORDINATES: protein motif:HMM:NF005574.0
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02127.1
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559387.1
COORDINATES: protein motif:HMM:NF024110.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560386.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560385.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_013560384.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_013560383.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560327.1
COORDINATES: protein motif:HMM:NF022431.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
COORDINATES: protein motif:HMM:NF003717.0
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559791.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF014838.2
COORDINATES: protein motif:HMM:TIGR01131.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: protein motif:HMM:NF012645.2
COORDINATES: protein motif:HMM:NF009884.0
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
COORDINATES: protein motif:HMM:NF017920.2
COORDINATES: protein motif:HMM:NF012456.2
COORDINATES: protein motif:HMM:NF013697.2
COORDINATES: protein motif:HMM:TIGR02456.1
GO:0047471 - maltose alpha-D-glucosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560368.1
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560370.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558605.1
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021916.2
bifunctional phosphoglucose/phosphomannose isomerase
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559817.1
COORDINATES: protein motif:HMM:NF004281.0
molybdopterin-synthase adenylyltransferase MoeB
COORDINATES: protein motif:HMM:NF015786.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559813.1
COORDINATES: protein motif:HMM:NF015597.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559484.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019057.2
COORDINATES: protein motif:HMM:NF024580.2
COORDINATES: protein motif:HMM:NF024686.2
chitobiase/beta-hexosaminidase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF019291.2
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006304 - DNA modification [Evidence IEA]
Eco57I restriction-modification methylase domain-containing protein
COORDINATES: protein motif:HMM:NF020249.2
COORDINATES: protein motif:HMM:NF024733.2
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
BREX system Lon protease-like protein BrxL
COORDINATES: protein motif:HMM:NF025454.2
COORDINATES: protein motif:HMM:NF016246.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559482.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559481.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: protein motif:HMM:NF001126.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0008360 - regulation of cell shape [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_013559460.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559459.1
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:YP_005229143.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559456.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_004410410.1
COORDINATES: similar to AA sequence:RefSeq:WP_004633577.1
COORDINATES: similar to AA sequence:RefSeq:WP_009125149.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003720928.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559450.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00967.1
COORDINATES: similar to AA sequence:RefSeq:WP_016911111.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559447.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559446.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559445.1
COORDINATES: similar to AA sequence:RefSeq:WP_020062304.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000178880.1
COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559441.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559440.1
COORDINATES: similar to AA sequence:RefSeq:WP_007073026.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559438.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559437.1
COORDINATES: similar to AA sequence:RefSeq:WP_001829782.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559435.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559434.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559433.1
COORDINATES: similar to AA sequence:RefSeq:WP_009770933.1
COORDINATES: protein motif:HMM:NF004363.0
COORDINATES: similar to AA sequence:RefSeq:WP_013559430.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559429.1
COORDINATES: similar to AA sequence:RefSeq:WP_012084982.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559426.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_000246374.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559423.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: protein motif:HMM:TIGR03663.1
COORDINATES: similar to AA sequence:RefSeq:WP_017465099.1
COORDINATES: protein motif:HMM:TIGR01472.1
GO:0008446 - GDP-mannose 4,6-dehydratase activity [Evidence IEA]
low molecular weight protein arginine phosphatase
transglycosylase SLT domain-containing protein
COORDINATES: protein motif:HMM:NF017181.2
COORDINATES: protein motif:HMM:NF013030.2
COORDINATES: protein motif:HMM:NF001236.0
GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561115.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560289.1
COORDINATES: protein motif:HMM:NF017880.2
COORDINATES: protein motif:HMM:NF025255.2
COORDINATES: protein motif:HMM:TIGR01297.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559654.1
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:NF015949.2
COORDINATES: protein motif:HMM:NF026066.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:NF015715.2
COORDINATES: protein motif:HMM:TIGR03943.1
COORDINATES: protein motif:HMM:NF021897.2
type IV secretion system DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559771.1
COORDINATES: protein motif:HMM:NF012599.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559775.1
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558785.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558931.1
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017370549.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016163.2
COORDINATES: protein motif:HMM:NF025879.2
COORDINATES: protein motif:HMM:NF014082.2
bifunctional class I SAM-dependent methyltransferase/glycosyltransferase family 2 protein
COORDINATES: similar to AA sequence:RefSeq:WP_016293117.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
COORDINATES: protein motif:HMM:NF040134.1
COORDINATES: protein motif:HMM:NF014690.2
COORDINATES: protein motif:HMM:NF016141.2
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: similar to AA sequence:RefSeq:WP_013558568.1
COORDINATES: protein motif:HMM:TIGR00103.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: protein motif:HMM:NF004046.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017774.2
COORDINATES: protein motif:HMM:TIGR01439.1
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF015948.2
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558784.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013558694.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558695.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558696.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558697.1
phosphate ABC transporter ATP-binding protein
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF040769.1
COORDINATES: protein motif:HMM:NF014710.2
COORDINATES: protein motif:HMM:TIGR00449.1
COORDINATES: protein motif:HMM:NF018758.2
COORDINATES: protein motif:HMM:NF013362.2
COORDINATES: protein motif:HMM:TIGR00046.1
COORDINATES: similar to AA sequence:RefSeq:WP_013558720.1
GO:1990397 - queuosine salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013560977.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559618.1
GO:0008705 - methionine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006396.0
bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase
COORDINATES: protein motif:HMM:NF024855.2
COORDINATES: protein motif:HMM:TIGR00158.1
COORDINATES: protein motif:HMM:NF013592.2
COORDINATES: protein motif:HMM:NF021384.2
COORDINATES: protein motif:HMM:NF024937.2
COORDINATES: protein motif:HMM:NF016085.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559098.1
thiamine ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR01378.1
GO:0004788 - thiamine diphosphokinase activity [Evidence IEA]
GO:0006772 - thiamine metabolic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_013561383.1
GO:0008890 - glycine C-acetyltransferase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559082.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559081.1
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559078.1
acylneuraminate cytidylyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_013560175.1
COORDINATES: protein motif:HMM:NF017011.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559076.1
N-acetylneuraminate synthase family protein
radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:NF014409.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559065.1
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559063.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
COORDINATES: similar to AA sequence:RefSeq:WP_013560416.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559059.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559058.1
COORDINATES: similar to AA sequence:RefSeq:WP_013559279.1
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559127.1
COORDINATES: protein motif:HMM:NF012739.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561385.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013827.2
COORDINATES: protein motif:HMM:NF039800.1
COORDINATES: protein motif:HMM:NF012546.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
prolyl oligopeptidase family serine peptidase
COORDINATES: protein motif:HMM:NF020950.2
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: protein motif:HMM:NF013672.2
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF039324.1
COORDINATES: similar to AA sequence:RefSeq:WP_016291896.1
COORDINATES: protein motif:HMM:NF040786.1
selenium metabolism-associated LysR family transcriptional regulator
COORDINATES: protein motif:HMM:NF014686.2
NrtA/SsuA/CpmA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF015962.2
GO:0050532 - 2-phosphosulfolactate phosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01953.1
COORDINATES: protein motif:HMM:NF016204.2
COORDINATES: protein motif:HMM:TIGR00487.1
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: protein motif:HMM:TIGR00431.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004162.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
GO:0006747 - FAD biosynthetic process [Evidence IEA]; GO:0009398 - FMN biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014560.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024952.2
COORDINATES: protein motif:HMM:NF016001.2
nitroreductase/quinone reductase family protein
COORDINATES: protein motif:HMM:NF012760.2
COORDINATES: protein motif:HMM:TIGR01417.1
GO:0008965 - phosphoenolpyruvate-protein phosphotransferase activity [Evidence IEA]
GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA]; GO:0006808 - regulation of nitrogen utilization [Evidence IEA]
phosphoenolpyruvate--protein phosphotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_009352491.1
transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00296.1
COORDINATES: protein motif:HMM:NF013670.2
GO:0008745 - N-acetylmuramoyl-L-alanine amidase activity [Evidence IEA]
GO:0009253 - peptidoglycan catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF014414.2
COORDINATES: protein motif:HMM:TIGR04041.1
YjjW family glycine radical enzyme activase
COORDINATES: protein motif:HMM:TIGR04040.1
GO:0004519 - endonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: protein motif:HMM:TIGR02152.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023428.2
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF013356.2
COORDINATES: similar to AA sequence:RefSeq:WP_016291044.1
GO:0004355 - glutamate synthase (NADPH) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004862.0
sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein
COORDINATES: protein motif:HMM:NF039796.1
COORDINATES: protein motif:HMM:NF026235.2
COORDINATES: protein motif:HMM:TIGR00556.1
COORDINATES: protein motif:HMM:NF003417.0
COORDINATES: protein motif:HMM:NF013180.2
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:NF028468.2
COORDINATES: protein motif:HMM:NF013340.2
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: similar to AA sequence:RefSeq:WP_013559035.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_013559836.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: protein motif:HMM:NF015060.2
COORDINATES: protein motif:HMM:NF018991.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561007.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561035.1
COORDINATES: protein motif:HMM:NF012305.2
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559640.1
COORDINATES: protein motif:HMM:NF013757.2
COORDINATES: protein motif:HMM:NF005425.0
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006757.0
GO:0003994 - aconitate hydratase activity [Evidence IEA]
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_013561171.1
COORDINATES: protein motif:HMM:NF014090.2
GO:0005384 - manganese ion transmembrane transporter activity [Evidence IEA]
GO:0030026 - cellular manganese ion homeostasis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00945.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF014470.2
GO:0015031 - protein transport [Evidence IEA]
twin-arginine translocase TatA/TatE family subunit
COORDINATES: protein motif:HMM:TIGR01313.1
COORDINATES: protein motif:HMM:NF013237.2
COORDINATES: protein motif:HMM:NF006765.0
GO:0004616 - phosphogluconate dehydrogenase (decarboxylating) activity [Evidence IEA]
decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase
FadR/GntR family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR03336.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: protein motif:HMM:NF005325.0
indolepyruvate oxidoreductase subunit beta
COORDINATES: protein motif:HMM:NF013665.2
COORDINATES: protein motif:HMM:NF002834.0
GO:0047761 - butyrate kinase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]
GO:0008662 - 1-phosphofructokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01430.1
GO:0043101 - purine-containing compound salvage [Evidence IEA]
COORDINATES: protein motif:HMM:NF036826.2
COORDINATES: protein motif:HMM:NF006850.0
GO:0000034 - adenine deaminase activity [Evidence IEA]
GO:0006146 - adenine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF001960.0
COORDINATES: similar to AA sequence:RefSeq:WP_013560669.1
COORDINATES: protein motif:HMM:NF015953.2
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: protein motif:HMM:TIGR00792.1
GO:0015486 - glycoside-pentoside-hexuronide:cation symporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0006812 - monoatomic cation transport [Evidence IEA]
glycoside-pentoside-hexuronide (GPH):cation symporter
COORDINATES: protein motif:HMM:NF036410.2
CpsD/CapB family tyrosine-protein kinase
COORDINATES: protein motif:HMM:NF015132.2
COORDINATES: protein motif:HMM:NF015549.2
COORDINATES: protein motif:HMM:NF017273.2
COORDINATES: protein motif:HMM:NF024098.2
COORDINATES: protein motif:HMM:NF015531.2
COORDINATES: protein motif:HMM:NF025826.2
COORDINATES: similar to AA sequence:RefSeq:WP_013560674.1
GO:0004619 - phosphoglycerate mutase activity [Evidence IEA]
2,3-diphosphoglycerate-dependent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF020123.2
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF024093.2
COORDINATES: protein motif:HMM:TIGR02364.1
GO:0047324 - phosphoenolpyruvate-glycerone phosphotransferase activity [Evidence IEA]
dihydroxyacetone kinase phosphoryl donor subunit DhaM
COORDINATES: similar to AA sequence:RefSeq:WP_013561135.1
GO:0004370 - glycerol kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02363.1
COORDINATES: protein motif:HMM:NF012455.2
GO:0046872 - metal ion binding [Evidence IEA]
Presence of a B(12) (cobalamin)-binding domain implies dependence on cobalamin itself, in one of its several forms, or in some unusual lineages, dependence on a cobalamin-like analog; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017207.2
monomethylamine:corrinoid methyltransferase
COORDINATES: protein motif:HMM:NF018749.2
COORDINATES: protein motif:HMM:NF003302.0
COORDINATES: protein motif:HMM:NF014649.2
COORDINATES: protein motif:HMM:NF024739.2
COORDINATES: protein motif:HMM:NF020133.2
COORDINATES: similar to AA sequence:RefSeq:WP_013559693.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0032778 - P-type cobalt transporter activity [Evidence IEA]
GO:0006824 - cobalt ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559691.1
energy-coupling factor ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_013559501.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013559500.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF024634.2
COORDINATES: protein motif:HMM:NF013465.2
zinc ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013143.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: protein motif:HMM:NF016202.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561536.1
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013561183.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560312.1
COORDINATES: similar to AA sequence:RefSeq:WP_013560311.1