Grus americana isolate bGruAme1 chromosome 32, bGruAme1.mat, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Gruiformes; Gruidae; Grus.
REFSEQ INFORMATION: The reference sequence is identical to\nCM054336.1.\nAssembly name: bGruAme1.mat\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2023/02/24. The original whole-genome shotgun project has the\naccession JARBUS000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-FEB-2022\nAssembly Method :: TrioCanu v. 2.1; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; salsa v. 2.2; Arrow\n polishing & gap filling v. 2.0.2; Merfin\n polishing v. 1.0; Freebayes polishing v.\n 1.3.1\nAssembly Name :: bGruAme1.mat\nDiploid :: Maternal Haplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 232.6x\nSequencing Technology :: PacBio Sequel II CLR; 10X Gemonics linked\n reads; Arima Hi-C v1; Bionano DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_028858705.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Gnomon; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/31/2023\n##Genome-Annotation-Data-END##
zinc finger protein 345-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 104 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon.
immediate early response 3; Derived by automated computational analysis using gene prediction method: Gnomon.
COORDINATES: polyA evidence [ECO:0006239]
radiation-inducible immediate-early gene IEX-1
discoidin domain receptor tyrosine kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
discoidin domain receptor tyrosine kinase 1, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
discoidin domain receptor tyrosine kinase 1, transcript variant X1
discoidin domain receptor tyrosine kinase 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
discoidin domain receptor tyrosine kinase 1, transcript variant X2
epithelial discoidin domain-containing receptor 1 isoform X3
epithelial discoidin domain-containing receptor 1 isoform X2
epithelial discoidin domain-containing receptor 1 isoform X1
epithelial discoidin domain-containing receptor 1 isoform X4
discoidin domain receptor tyrosine kinase 1, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
epithelial discoidin domain-containing receptor 1 isoform X5
killer cell lectin-like receptor subfamily B member 1C; Derived by automated computational analysis using gene prediction method: Gnomon.
killer cell lectin-like receptor subfamily B member 1C
C-type lectin domain family 2 member B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member B-like, transcript variant X1
C-type lectin domain family 2 member B-like, transcript variant X2
C-type lectin domain family 2 member B-like
general transcription factor IIH subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon.
general transcription factor IIH subunit 4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read
valyl-tRNA synthetase 2, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon.
putative surface-exposed virulence protein BigA; Derived by automated computational analysis using gene prediction method: Gnomon.
putative surface-exposed virulence protein BigA
uncharacterized LOC129198226; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 3 bases at 3 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC129198226
splicing factor 3A subunit 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
cell surface glycoprotein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory subunit 18; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory subunit 18, transcript variant X2
protein phosphatase 1 regulatory subunit 18, transcript variant X1
DEAH-box helicase 16; Derived by automated computational analysis using gene prediction method: Gnomon.
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
chromosome 32 C6orf136 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
chromosome 32 C6orf136 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
chromosome 32 C6orf136 homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
uncharacterized protein C6orf136 homolog isoform X2
uncharacterized protein C6orf136 homolog isoform X1
alpha tubulin acetyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha tubulin acetyltransferase 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 8 Proteins
alpha tubulin acetyltransferase 1, transcript variant X3
alpha tubulin acetyltransferase 1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
alpha-tubulin N-acetyltransferase 1 isoform X3
alpha-tubulin N-acetyltransferase 1 isoform X1
alpha-tubulin N-acetyltransferase 1 isoform X2
mitochondrial ribosomal protein S18B; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
28S ribosomal protein S18b, mitochondrial
protein phosphatase 1 regulatory subunit 10; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory subunit 10, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 4 Proteins
protein phosphatase 1 regulatory subunit 10, transcript variant X7
protein phosphatase 1 regulatory subunit 10, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
protein phosphatase 1 regulatory subunit 10, transcript variant X4
protein phosphatase 1 regulatory subunit 10, transcript variant X2
protein phosphatase 1 regulatory subunit 10, transcript variant X1
protein phosphatase 1 regulatory subunit 10, transcript variant X6
serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1
serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X2
ATP binding cassette subfamily F member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ATP binding cassette subfamily F member 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein
ATP-binding cassette sub-family F member 1 isoform X1
ATP binding cassette subfamily F member 1, transcript variant X2
ATP-binding cassette sub-family F member 1 isoform X2
G protein nucleolar 1 (putative); Derived by automated computational analysis using gene prediction method: Gnomon.
guanine nucleotide-binding protein-like 1
ribonuclease P/MRP subunit p21; Derived by automated computational analysis using gene prediction method: Gnomon.
ribonuclease P/MRP subunit p21, transcript variant X4
ribonuclease P/MRP subunit p21, transcript variant X2
ribonuclease P/MRP subunit p21, transcript variant X1
ribonuclease P/MRP subunit p21, transcript variant X5
ribonuclease P/MRP subunit p21, transcript variant X3
ribonuclease P protein subunit p21 isoform X4
ribonuclease P protein subunit p21 isoform X5
ribonuclease P protein subunit p21 isoform X3
ribonuclease P protein subunit p21 isoform X2
ribonuclease P protein subunit p21 isoform X1
tripartite motif containing 39; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory inhibitor subunit 11; Derived by automated computational analysis using gene prediction method: Gnomon.
protein phosphatase 1 regulatory inhibitor subunit 11
RNA polymerase I subunit H; Derived by automated computational analysis using gene prediction method: Gnomon.
DNA-directed RNA polymerase I subunit RPA12
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase; Derived by automated computational analysis using gene prediction method: Gnomon.
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X1
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X2
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X4
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X5
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, transcript variant X3
alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase
E3 ubiquitin-protein ligase TRIM11-like; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM11-like, transcript variant X2
E3 ubiquitin-protein ligase TRIM11-like, transcript variant X4
E3 ubiquitin-protein ligase TRIM11-like, transcript variant X3
E3 ubiquitin-protein ligase TRIM11-like, transcript variant X1
E3 ubiquitin-protein ligase TRIM11-like, transcript variant X5
uncharacterized protein LOC129198302 isoform X3
E3 ubiquitin-protein ligase TRIM11-like isoform X4
uncharacterized protein LOC129198302 isoform X1
histone H1.11R-like; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM7-like; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X3
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X2
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X5
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X4
E3 ubiquitin-protein ligase TRIM7-like, transcript variant X1
uncharacterized protein LOC129198334 isoform X2
E3 ubiquitin-protein ligase TRIM7-like isoform X5
uncharacterized protein LOC129198334 isoform X4
uncharacterized protein LOC129198334 isoform X1
uncharacterized protein LOC129198334 isoform X3
butyrophilin subfamily 1 member A1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
butyrophilin subfamily 1 member A1-like, transcript variant X2
butyrophilin subfamily 1 member A1-like, transcript variant X1
butyrophilin subfamily 1 member A1-like, transcript variant X3
butyrophilin subfamily 1 member A1-like isoform X1
butyrophilin subfamily 1 member A1-like isoform X3
butyrophilin subfamily 1 member A1-like isoform X2
C-type lectin domain family 2 member E-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member E-like, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins
C-type lectin domain family 2 member E-like, transcript variant X5
C-type lectin domain family 2 member E-like, transcript variant X4
C-type lectin domain family 2 member E-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins
C-type lectin domain family 2 member E-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 23 Proteins
C-type lectin domain family 2 member E-like, transcript variant X6
C-type lectin domain family 2 member E-like, transcript variant X7
C-type lectin domain family 2 member E-like isoform X2
C-type lectin domain family 2 member D-like isoform X1
C-type lectin domain family 2 member E-like isoform X3
killer cell lectin-like receptor subfamily B member 1B allele A; Derived by automated computational analysis using gene prediction method: Gnomon.
killer cell lectin-like receptor subfamily B member 1B allele A, transcript variant X1
killer cell lectin-like receptor subfamily B member 1B allele A, transcript variant X2
killer cell lectin-like receptor subfamily B member 1B allele A isoform X1
killer cell lectin-like receptor subfamily B member 1B allele B isoform X2
C-type lectin domain family 2 member A-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member A-like, transcript variant X1
C-type lectin domain family 2 member A-like, transcript variant X4
C-type lectin domain family 2 member A-like, transcript variant X2
C-type lectin domain family 2 member A-like, transcript variant X3
C-type lectin domain family 2 member A-like isoform X3
C-type lectin domain family 2 member A-like isoform X2
killer cell lectin-like receptor subfamily F member 1; Derived by automated computational analysis using gene prediction method: Gnomon.
killer cell lectin-like receptor subfamily F member 1, transcript variant X1
killer cell lectin-like receptor subfamily F member 1, transcript variant X3
killer cell lectin-like receptor subfamily F member 1, transcript variant X2
killer cell lectin-like receptor subfamily F member 1 isoform X3
uncharacterized protein LOC129198348 isoform X2
uncharacterized protein LOC129198348 isoform X1
C-type lectin domain family 2 member B-like, transcript variant X4
C-type lectin domain family 2 member B-like, transcript variant X6
C-type lectin domain family 2 member B-like, transcript variant X7
C-type lectin domain family 2 member B-like, transcript variant X3
C-type lectin domain family 2 member B-like, transcript variant X5
killer cell lectin-like receptor subfamily G member 1 isoform X4
killer cell lectin-like receptor subfamily B member 1A; Derived by automated computational analysis using gene prediction method: Gnomon.
killer cell lectin-like receptor subfamily B member 1A
C-type lectin domain family 2 member B-like isoform X1
C-type lectin domain family 2 member B-like isoform X2
zinc finger protein 692-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 692-like, transcript variant X2
zinc finger protein 692-like, transcript variant X1
uncharacterized LOC129198391; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 long SRA reads, 29 Proteins
zinc finger protein 420-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 152 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: zinc finger protein 420-like
zinc finger protein CKR1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein CKR1-like, transcript variant X1
zinc finger protein CKR1-like, transcript variant X4
zinc finger protein CKR1-like, transcript variant X2
zinc finger protein CKR1-like, transcript variant X3
zinc finger protein CKR1-like, transcript variant X5
zinc finger protein CKR1-like isoform X2
zinc finger protein CKR1-like isoform X1
zinc finger protein CKR1-like isoform X3
transfer RNA leucine (anticodon CAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon CUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
interleukin 4 induced 1; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transfer RNA asparagine (anticodon GUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
E3 ubiquitin-protein ligase TRIM7-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
E3 ubiquitin-protein ligase TRIM7-like isoform X1
transfer RNA lysine (anticodon CUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
E3 ubiquitin-protein ligase TRIM39-like; Derived by automated computational analysis using gene prediction method: Gnomon.
E3 ubiquitin-protein ligase TRIM39-like, transcript variant X2
E3 ubiquitin-protein ligase TRIM39-like, transcript variant X1
E3 ubiquitin-protein ligase TRIM39-like isoform X2
E3 ubiquitin-protein ligase TRIM39-like isoform X1
zinc finger protein RFP-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 15 Proteins
E3 ubiquitin-protein ligase TRIM39-like, transcript variant X3
E3 ubiquitin-protein ligase TRIM39-like, transcript variant X4
E3 ubiquitin-protein ligase TRIM39-like isoform X3
tripartite motif-containing protein 15-like isoform X4
uncharacterized LOC129198386; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198386, transcript variant X2
uncharacterized LOC129198386, transcript variant X1
E3 ubiquitin-protein ligase TRIM41-like; Derived by automated computational analysis using gene prediction method: Gnomon.
receptor for activated C kinase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
receptor of activated protein C kinase 1
tripartite motif-containing protein 10-like; Derived by automated computational analysis using gene prediction method: Gnomon.
tripartite motif-containing protein 10-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
tripartite motif-containing protein 10-like, transcript variant X2
tripartite motif-containing protein 10-like isoform X1
tripartite motif-containing protein 10-like isoform X2
zinc finger protein 239-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 239-like, transcript variant X1
zinc finger protein 271-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 271-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 287 Proteins
zinc finger protein 271-like, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 229 Proteins
SH3 binding domain protein 5 like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 135-like; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger protein 135-like, transcript variant X2
zinc finger protein 135-like, transcript variant X3
zinc finger protein 135-like, transcript variant X4
zinc finger protein 135-like, transcript variant X1
zinc finger protein 239-like, transcript variant X2
gamma-aminobutyric acid type B receptor subunit 1; Derived by automated computational analysis using gene prediction method: Gnomon.
gamma-aminobutyric acid type B receptor subunit 1
RING finger protein 225-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Gnomon.
flotillin 1; Derived by automated computational analysis using gene prediction method: Gnomon.
tubulin beta class I; Derived by automated computational analysis using gene prediction method: Gnomon.
mediator of DNA damage checkpoint 1; Derived by automated computational analysis using gene prediction method: Gnomon.
mediator of DNA damage checkpoint 1, transcript variant X1
mediator of DNA damage checkpoint 1, transcript variant X2
mediator of DNA damage checkpoint 1, transcript variant X3
mediator of DNA damage checkpoint protein 1 isoform X1
mediator of DNA damage checkpoint protein 1 isoform X2
mediator of DNA damage checkpoint protein 1 isoform X3
uncharacterized LOC129198336; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198232; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil alpha-helical rod protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
coiled-coil alpha-helical rod protein 1-like, transcript variant X3
coiled-coil alpha-helical rod protein 1-like, transcript variant X2
coiled-coil alpha-helical rod protein 1-like, transcript variant X1
coiled-coil alpha-helical rod protein 1-like, transcript variant X5
coiled-coil alpha-helical rod protein 1-like, transcript variant X4
coiled-coil alpha-helical rod protein 1-like, transcript variant X6
coiled-coil alpha-helical rod protein 1-like isoform X1
coiled-coil alpha-helical rod protein 1-like isoform X2
butyrophilin subfamily 3 member A2-like isoform X2
butyrophilin subfamily 3 member A2-like isoform X3
zinc finger protein OZF-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 276 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 237 Proteins
butyrophilin subfamily 3 member A2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
butyrophilin subfamily 3 member A2-like, transcript variant X2
butyrophilin subfamily 3 member A2-like, transcript variant X1
butyrophilin subfamily 3 member A2-like isoform X1
zinc finger protein 665-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 201 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins
1-acylglycerol-3-phosphate O-acyltransferase 1; Derived by automated computational analysis using gene prediction method: Gnomon.
1-acylglycerol-3-phosphate O-acyltransferase 1
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha
ring finger protein 5; Derived by automated computational analysis using gene prediction method: Gnomon.
ring finger protein 5, transcript variant X1
ring finger protein 5, transcript variant X2
E3 ubiquitin-protein ligase RNF5 isoform X1
E3 ubiquitin-protein ligase RNF5 isoform X2
activating transcription factor 6 beta; Derived by automated computational analysis using gene prediction method: Gnomon.
activating transcription factor 6 beta, transcript variant X2
activating transcription factor 6 beta, transcript variant X3
activating transcription factor 6 beta, transcript variant X1
cyclic AMP-dependent transcription factor ATF-6 beta isoform X2
cyclic AMP-dependent transcription factor ATF-6 beta isoform X3
cyclic AMP-dependent transcription factor ATF-6 beta isoform X1
FKBP prolyl isomerase like; Derived by automated computational analysis using gene prediction method: Gnomon.
proline rich transmembrane protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
carnitine O-acetyltransferase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
palmitoyl-protein thioesterase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
histone-lysine N-methyltransferase EHMT2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
histone-lysine N-methyltransferase EHMT2-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
LOW QUALITY PROTEIN: histone-lysine N-methyltransferase EHMT2-like
uncharacterized LOC129198387; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 12; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
zinc finger and BTB domain-containing protein 12
uncharacterized LOC129198236; Derived by automated computational analysis using gene prediction method: Gnomon.
complement C2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
butyrophilin subfamily 1 member A1-like, transcript variant X5
butyrophilin subfamily 3 member A2-like, transcript variant X4
butyrophilin subfamily 3 member A2-like, transcript variant X3
butyrophilin subfamily 3 member A2-like isoform X4
butyrophilin subfamily 1 member A1-like, transcript variant X7
butyrophilin subfamily 1 member A1-like, transcript variant X9
butyrophilin subfamily 1 member A1-like, transcript variant X11
butyrophilin subfamily 1 member A1-like, transcript variant X10
butyrophilin subfamily 1 member A1-like, transcript variant X8
uncharacterized protein LOC129198296 isoform X1
butyrophilin subfamily 1 member A1-like isoform X5
butyrophilin subfamily 1 member A1-like isoform X7
butyrophilin subfamily 1 member A1-like isoform X9
butyrophilin subfamily 1 member A1-like isoform X8
uncharacterized protein LOC129198296 isoform X6
butyrophilin subfamily 1 member A1-like, transcript variant X6
butyrophilin subfamily 1 member A1-like, transcript variant X4
butyrophilin subfamily 1 member A1-like, transcript variant X12
butyrophilin subfamily 1 member A1-like, transcript variant X13
butyrophilin subfamily 1 member A1-like isoform X4
butyrophilin subfamily 1 member A1-like isoform X10
butyrophilin subfamily 1 member A1-like isoform X11
zinc finger protein 420-like, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 3 Proteins
zinc finger protein 420-like, transcript variant X3
zinc finger protein 420-like, transcript variant X1
zinc finger protein 420-like, transcript variant X2
zinc finger protein ZFP2-like isoform X1
zinc finger protein ZFP2-like isoform X2
class I histocompatibility antigen, F10 alpha chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
class I histocompatibility antigen, F10 alpha chain-like
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 397 Proteins
LOW QUALITY PROTEIN: butyrophilin subfamily 3 member A2-like
ohanin-like; Derived by automated computational analysis using gene prediction method: Gnomon.
HLA class II histocompatibility antigen, DM beta chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
butyrophilin-like protein 2; Derived by automated computational analysis using gene prediction method: Gnomon.
class II histocompatibility antigen, M beta 1 chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198385; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads
class I histocompatibility antigen, F10 alpha chain-like, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 389 Proteins
class I histocompatibility antigen, F10 alpha chain-like, transcript variant X1
class I histocompatibility antigen, F10 alpha chain-like isoform X1
class I histocompatibility antigen, F10 alpha chain-like isoform X2
HLA class II histocompatibility antigen, DM beta chain-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: HLA class II histocompatibility antigen, DM beta chain-like
class I histocompatibility antigen, F10 alpha chain-like, transcript variant X3
class I histocompatibility antigen, F10 alpha chain-like, transcript variant X5
class I histocompatibility antigen, F10 alpha chain-like, transcript variant X6
class I histocompatibility antigen, F10 alpha chain-like, transcript variant X4
class I histocompatibility antigen, F10 alpha chain-like isoform X5
class I histocompatibility antigen, F10 alpha chain-like isoform X4
class I histocompatibility antigen, F10 alpha chain-like isoform X3
class I histocompatibility antigen, F10 alpha chain-like isoform X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
uncharacterized LOC129198384; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198384, transcript variant X2
uncharacterized LOC129198384, transcript variant X6
uncharacterized LOC129198384, transcript variant X4
uncharacterized LOC129198384, transcript variant X1
uncharacterized LOC129198384, transcript variant X3
uncharacterized LOC129198384, transcript variant X5
C-type lectin domain family 2 member D-like; Derived by automated computational analysis using gene prediction method: Gnomon.
C-type lectin domain family 2 member D-like
butyrophilin subfamily 2 member A2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198388; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198390; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
class II histocompatibility antigen, M alpha chain; Derived by automated computational analysis using gene prediction method: Gnomon.
class II histocompatibility antigen, M alpha chain
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 10 Proteins
bromodomain containing 2; Derived by automated computational analysis using gene prediction method: Gnomon.
bromodomain containing 2, transcript variant X2
bromodomain containing 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 long SRA reads, 6 Proteins
bromodomain containing 2, transcript variant X4
bromodomain containing 2, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 long SRA reads, 25 Proteins
bromodomain containing 2, transcript variant X6
bromodomain-containing protein 2 isoform X1
bromodomain-containing protein 2 isoform X3
bromodomain-containing protein 2 isoform X4
bromodomain-containing protein 2 isoform X2
bromodomain containing 2, transcript variant X5
bromodomain-containing protein 2 isoform X5
class II histocompatibility antigen, B-L beta chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
class II histocompatibility antigen, B-L beta chain-like
HLA class II histocompatibility antigen, DR alpha chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
HLA class II histocompatibility antigen, DR alpha chain-like
collagen type XI alpha 2 chain; Derived by automated computational analysis using gene prediction method: Gnomon.
solute carrier family 39 member 7; Derived by automated computational analysis using gene prediction method: Gnomon.
hydroxysteroid 17-beta dehydrogenase 8; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: (3R)-3-hydroxyacyl-CoA dehydrogenase
ring finger protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
ring finger protein 1, transcript variant X1
ring finger protein 1, transcript variant X2
E3 ubiquitin-protein ligase RING1 isoform X1
E3 ubiquitin-protein ligase RING1 isoform X2
VPS52 subunit of GARP complex; Derived by automated computational analysis using gene prediction method: Gnomon.
vacuolar protein sorting-associated protein 52 homolog
ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Gnomon.
WD repeat domain 46; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins
beta-1,3-galactosyltransferase 4; Derived by automated computational analysis using gene prediction method: Gnomon.
prefoldin subunit 6; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
ral guanine nucleotide dissociation stimulator like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
ral guanine nucleotide dissociation stimulator like 2
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
LOW QUALITY PROTEIN: ral guanine nucleotide dissociation stimulator-like 2
TAP binding protein; Derived by automated computational analysis using gene prediction method: Gnomon.
TAP binding protein, transcript variant X3
TAP binding protein, transcript variant X1
TAP binding protein, transcript variant X2
zinc finger and BTB domain containing 22; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain containing 22
zinc finger and BTB domain-containing protein 22
death domain associated protein; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198412; Derived by automated computational analysis using gene prediction method: Gnomon.
kinesin family member C1; Derived by automated computational analysis using gene prediction method: Gnomon.
kinesin family member C1, transcript variant X1
kinesin family member C1, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 5 Proteins
PHD finger protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
PHD finger protein 1, transcript variant X1
PHD finger protein 1, transcript variant X2
PHD finger protein 1, transcript variant X3
cutA divalent cation tolerance homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
cutA divalent cation tolerance homolog, transcript variant X5
cutA divalent cation tolerance homolog, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins
cutA divalent cation tolerance homolog, transcript variant X3
cutA divalent cation tolerance homolog, transcript variant X4
cutA divalent cation tolerance homolog, transcript variant X1
synaptic Ras GTPase activating protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
synaptic Ras GTPase activating protein 1, transcript variant X2
synaptic Ras GTPase activating protein 1, transcript variant X4
synaptic Ras GTPase activating protein 1, transcript variant X1
synaptic Ras GTPase activating protein 1, transcript variant X3
synaptic Ras GTPase activating protein 1, transcript variant X5
synaptic Ras GTPase activating protein 1, transcript variant X6
synaptic Ras GTPase activating protein 1, transcript variant X9
ras/Rap GTPase-activating protein SynGAP isoform X3
ras/Rap GTPase-activating protein SynGAP isoform X5
ras/Rap GTPase-activating protein SynGAP isoform X6
ras/Rap GTPase-activating protein SynGAP isoform X4
ras/Rap GTPase-activating protein SynGAP isoform X1
ras/Rap GTPase-activating protein SynGAP isoform X2
synaptic Ras GTPase activating protein 1, transcript variant X8
ras/Rap GTPase-activating protein SynGAP isoform X8
synaptic Ras GTPase activating protein 1, transcript variant X7
ras/Rap GTPase-activating protein SynGAP isoform X7
synaptic Ras GTPase activating protein 1, transcript variant X10
ras/Rap GTPase-activating protein SynGAP isoform X9
synaptic Ras GTPase activating protein 1, transcript variant X11
ras/Rap GTPase-activating protein SynGAP isoform X10
uncharacterized LOC129198416; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198416, transcript variant X2
uncharacterized LOC129198416, transcript variant X1
zinc finger and BTB domain containing 9; Derived by automated computational analysis using gene prediction method: Gnomon.
zinc finger and BTB domain-containing protein 9
butyrophilin like 2; Derived by automated computational analysis using gene prediction method: Gnomon.
transporter 2, ATP binding cassette subfamily B member; Derived by automated computational analysis using gene prediction method: Gnomon.
transporter 2, ATP binding cassette subfamily B member, transcript variant X3
transporter 2, ATP binding cassette subfamily B member, transcript variant X1
transporter 2, ATP binding cassette subfamily B member, transcript variant X2
transporter 1, ATP binding cassette subfamily B member; Derived by automated computational analysis using gene prediction method: Gnomon.
transporter 1, ATP binding cassette subfamily B member, transcript variant X1
transporter 1, ATP binding cassette subfamily B member, transcript variant X4
transporter 1, ATP binding cassette subfamily B member, transcript variant X2
transporter 1, ATP binding cassette subfamily B member, transcript variant X3
transporter 1, ATP binding cassette subfamily B member, transcript variant X6
transporter 1, ATP binding cassette subfamily B member, transcript variant X5
antigen peptide transporter 1 isoform X4
antigen peptide transporter 1 isoform X5
antigen peptide transporter 1 isoform X2
antigen peptide transporter 1 isoform X6
antigen peptide transporter 1 isoform X3
antigen peptide transporter 1 isoform X1
uncharacterized LOC129198430; Derived by automated computational analysis using gene prediction method: Gnomon.
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 183 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 73 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 378 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 372 Proteins
myelin-oligodendrocyte glycoprotein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
myelin-oligodendrocyte glycoprotein-like, transcript variant X1
myelin-oligodendrocyte glycoprotein-like, transcript variant X2
myelin-oligodendrocyte glycoprotein-like isoform X1
myelin-oligodendrocyte glycoprotein-like isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 379 Proteins
uncharacterized LOC129198431; Derived by automated computational analysis using gene prediction method: Gnomon.
tenascin-X-like; Derived by automated computational analysis using gene prediction method: Gnomon.
steroid 21-hydroxylase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
centromere protein A; Derived by automated computational analysis using gene prediction method: Gnomon.
complement C4-B-like; Derived by automated computational analysis using gene prediction method: Gnomon.
leukotriene B4 receptor; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198272; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC129198272
uncharacterized LOC129198436; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198436, transcript variant X2
uncharacterized LOC129198436, transcript variant X1
uncharacterized LOC129198436, transcript variant X3
uncharacterized protein LOC129198436 isoform X2
uncharacterized protein LOC129198436 isoform X1
class II histocompatibility antigen, M alpha chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198275; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC129198275
class II histocompatibility antigen, M alpha chain-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: class II histocompatibility antigen, M alpha chain-like
uncharacterized LOC129198278; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC129198278
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198282; Derived by automated computational analysis using gene prediction method: Gnomon.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
LOW QUALITY PROTEIN: uncharacterized protein LOC129198282
uncharacterized LOC129198284; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: uncharacterized protein LOC129198284
uncharacterized LOC129198437; Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC129198437, transcript variant X2
uncharacterized LOC129198437, transcript variant X1
uncharacterized LOC129198437, transcript variant X3
ADP-ribosylhydrolase ARH1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
ADP-ribosylhydrolase ARH1-like, transcript variant X1
ADP-ribosylhydrolase ARH1-like, transcript variant X2
uncharacterized protein LOC129198435 isoform X1
ADP-ribosylhydrolase ARH1-like isoform X2