Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 30, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 30, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015040.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015040.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000991.2.\nOn Dec 18, 2014 this sequence version replaced NC_015040.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 4611874
topology: linear
so has quality: SO_0000987
location: 1..4611874
location: region:1-4611874:1
RO_0002162: 9103

NC_015040
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4611874:1
position: 4611874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4611874:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 30
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

TMPRSS9
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TMPRSS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10782..22871
location: region:10782-22871:1
so has part: feature:10782-22871:1:exon
subclass of: SO_0000010

100551130
type: Gene
SIO_000068: ncbigene

position:10782:1
position: 10782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22871:1
position: 22871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10782-22871:1:exon

TMPRSS9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TMPRSS9
product: transmembrane serine protease 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031557094.1
SIO_010081: TMPRSS9
subclass of: SO_0000673
so part of: TMPRSS9
location: join(10782..10924,11727..11854,12196..12263,12652..12830,13522..13563,13893..14006,14880..15051,15248..15522,15649..15785,16363..16675,17205..17376,18233..18504,19181..19317,19855..20212,20293..20409,20652..20823,21103..21368,21869..22005,22468..22871)
location: region:10782-22871:1
so has part: feature:10782-10924:1:exon
so has part: feature:11727-11854:1:exon
so has part: feature:12196-12263:1:exon
so has part: feature:12652-12830:1:exon
so has part: feature:13522-13563:1:exon
so has part: feature:13893-14006:1:exon
so has part: feature:14880-15051:1:exon
so has part: feature:15248-15522:1:exon
so has part: feature:15649-15785:1:exon
so has part: feature:16363-16675:1:exon
so has part: feature:17205-17376:1:exon
so has part: feature:18233-18504:1:exon
so has part: feature:19181-19317:1:exon
so has part: feature:19855-20212:1:exon
so has part: feature:20293-20409:1:exon
so has part: feature:20652-20823:1:exon
so has part: feature:21103-21368:1:exon
so has part: feature:21869-22005:1:exon
so has part: feature:22468-22871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10782-10924:1:exon

position:10924:1
position: 10924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11727-11854:1:exon

position:11727:1
position: 11727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11854:1
position: 11854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12196-12263:1:exon

position:12196:1
position: 12196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12263:1
position: 12263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12652-12830:1:exon

position:12652:1
position: 12652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12830:1
position: 12830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:13522-13563:1:exon

position:13522:1
position: 13522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13563:1
position: 13563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:13893-14006:1:exon

position:13893:1
position: 13893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14006:1
position: 14006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14880-15051:1:exon

position:14880:1
position: 14880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15051:1
position: 15051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15248-15522:1:exon

position:15248:1
position: 15248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15522:1
position: 15522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15649-15785:1:exon

position:15649:1
position: 15649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15785:1
position: 15785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:16363-16675:1:exon

position:16363:1
position: 16363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16675:1
position: 16675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17205-17376:1:exon

position:17205:1
position: 17205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17376:1
position: 17376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:18233-18504:1:exon

position:18233:1
position: 18233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18504:1
position: 18504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:19181-19317:1:exon

position:19181:1
position: 19181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19317:1
position: 19317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:19855-20212:1:exon

position:19855:1
position: 19855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20212:1
position: 20212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:20293-20409:1:exon

position:20293:1
position: 20293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20409:1
position: 20409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:20652-20823:1:exon

position:20652:1
position: 20652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20823:1
position: 20823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:21103-21368:1:exon

position:21103:1
position: 21103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:21368:1
position: 21368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:21869-22005:1:exon

position:21869:1
position: 21869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22005:1
position: 22005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:22468-22871:1:exon

position:22468:1
position: 22468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMPRSS9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TMPRSS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 9
translation: MDQIKPVLGRRGPRASCWKVTIIATVVGSVTALYLGILLACHPTAETSFEHTVELRGITFNSSLQAENSDYYRVLTPALERLFLSSFQDSQLDWSCTGCTILDYSRSGNSSVIVRFRLRFAPQDSQPLSSATEEDALRHGLAAALQEQGLSLAAFGTISSASLTAPSDVSPYRPGLKAGSCPGDVFMCHNTQCVWKENPECDGRKDCADASDEKGCDCGSRPAMQTASRIVGGTEASRGEFPWQVSLRENNEHFCGAAILTDRWLVSAAHCFTEFQDPAMWAAYAGTTSISGADSSAVRMGIARIIPHPSYNTDTADYDVAVLELKRPVTFTKYIQPVCLPHAGHHFPTNKKCLISGWGYLKEDFLVKPEFLQKATVKLLDQALCSSLYSHALTDRMLCAGYLEGKIDSCQGDSGGPLVCEEPSGKFFLAGIVSWGIGCAEARRPGVYTRVTKLRDWILDAISPFPTSITRTVPLIHSSTNSNVVTAEELNATTSTAIPTSSLAASKPATAPRPQECGGRPGLSKPNKIVGGTDASRGEIPWQVSLQEDSMHFCGATIIGDRWLLSAAHCFNETNPEEIEAYMGTTSLNGTDGSAVKVSVTRVIPHPLFNPILLDFDVAVLELARPLVFNKYIQPICLPLAVQKFPVGKKCIISGWGNLQEGNVTMSESLQKASVGIIDQKTCNFLYNFSLTERMICAGFLEGKIDSCQGDSGGPLACEVTPGVFYLAGIVSWGIGCAQAKKPGVYSRITKLNDWILDTISEFPSPSTGAPSSSATTRTTADILTLHPSTTATSPISESTLSEKTTTTVEETSTALKSTEPAKPTHAPVVPCTSLTFRCSSNVCIGKENPECDEIVDCSNGFDESNCDCGLTTALAFSKIVGGSSAARGEWPWQVSLWLRQKEHKCGAVLIADRWLLSAAHCFDIYSDPKMWVAFLGTPFLNGNDGKMEKIFRIYKHPFYNVYSLDYDVALLELSVPVRFSSTIKPICLPDNSHIFQEGARCFITGWGSTKEGGLMTKHLQKAAVNVIGDQDCKKFYPVQISSRMVCAGFPQGTIDSCSGDAGGPLACKEPSGRWFLAGITSWGYGCARPYFPGVYTKVTAVQGWIAQNLKL
SIO_010081: TMPRSS9
subclass of: SO_0000673
so part of: TMPRSS9
location: join(10807..10924,11727..11854,12196..12263,12652..12830,13522..13563,13893..14006,14880..15051,15248..15522,15649..15785,16363..16675,17205..17376,18233..18504,19181..19317,19855..20212,20293..20409,20652..20823,21103..21368,21869..22005,22468..22629)
location: region:10807-22629:1
so has part: feature:10807-10924:1:exon
so has part: feature:11727-11854:1:exon
so has part: feature:12196-12263:1:exon
so has part: feature:12652-12830:1:exon
so has part: feature:13522-13563:1:exon
so has part: feature:13893-14006:1:exon
so has part: feature:14880-15051:1:exon
so has part: feature:15248-15522:1:exon
so has part: feature:15649-15785:1:exon
so has part: feature:16363-16675:1:exon
so has part: feature:17205-17376:1:exon
so has part: feature:18233-18504:1:exon
so has part: feature:19181-19317:1:exon
so has part: feature:19855-20212:1:exon
so has part: feature:20293-20409:1:exon
so has part: feature:20652-20823:1:exon
so has part: feature:21103-21368:1:exon
so has part: feature:21869-22005:1:exon
so has part: feature:22468-22629:1:exon

XP_031412954.1
type: Protein
SIO_000068: ncbiprotein

position:10807:1
position: 10807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22629:1
position: 22629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10807-10924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11727-11854:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12196-12263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12652-12830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:13522-13563:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:13893-14006:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14880-15051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15248-15522:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15649-15785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16363-16675:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:17205-17376:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:18233-18504:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:19181-19317:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:19855-20212:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:20293-20409:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:20652-20823:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:21103-21368:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:21869-22005:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:22468-22629:1:exon

TIMM13
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TIMM13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(23830..24145)
location: region:23830-24145:-1
so has part: feature:23830-24145:-1:exon
subclass of: SO_0000010

100550672
type: Gene
SIO_000068: ncbigene

position:23830:-1
position: 23830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24145:-1
position: 24145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23830-24145:-1:exon

TIMM13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TIMM13
product: translocase of inner mitochondrial membrane 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003213153.3
SIO_010081: TIMM13
subclass of: SO_0000673
so part of: TIMM13
location: complement(join(23830..23977,24051..24145))
location: region:23830-24145:-1
so has part: feature:24051-24145:-1:exon
so has part: feature:23830-23977:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24051-24145:-1:exon

position:24051:-1
position: 24051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23830-23977:-1:exon

position:23977:-1
position: 23977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TIMM13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit Tim13
translation: MTDKCFRKCIGKPGGALDNSEQKCIAMCMDRYMDAWNAVSRAYNSRLQRERANM
SIO_010081: TIMM13
subclass of: SO_0000673
so part of: TIMM13
location: complement(join(23879..23977,24051..24116))
location: region:23879-24116:-1
so has part: feature:24051-24116:-1:exon
so has part: feature:23879-23977:-1:exon

XP_003213201.1
type: Protein
SIO_000068: ncbiprotein

position:23879:-1
position: 23879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24116:-1
position: 24116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24051-24116:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23879-23977:-1:exon

LOC100550977
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100550977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 24958..40237
location: region:24958-40237:1
so has part: feature:24958-40237:1:exon
subclass of: SO_0000010

100550977
type: Gene
SIO_000068: ncbigene

position:24958:1
position: 24958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40237:1
position: 40237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24958-40237:1:exon

LOC100550977
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100550977
product: ceramide synthase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_010724738.2
SIO_010081: LOC100550977
subclass of: SO_0000673
so part of: LOC100550977
location: join(24958..25463,26894..27001,28321..30907,31996..32113,33001..33119,34209..34266,34738..34788,35499..35591,36799..36927,37190..37296,37838..37982,40035..40237)
location: region:24958-40237:1
so has part: feature:24958-25463:1:exon
so has part: feature:26894-27001:1:exon
so has part: feature:28321-30907:1:exon
so has part: feature:31996-32113:1:exon
so has part: feature:33001-33119:1:exon
so has part: feature:34209-34266:1:exon
so has part: feature:34738-34788:1:exon
so has part: feature:35499-35591:1:exon
so has part: feature:36799-36927:1:exon
so has part: feature:37190-37296:1:exon
so has part: feature:37838-37982:1:exon
so has part: feature:40035-40237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24958-25463:1:exon

position:25463:1
position: 25463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:26894-27001:1:exon

position:26894:1
position: 26894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27001:1
position: 27001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28321-30907:1:exon

position:28321:1
position: 28321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30907:1
position: 30907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:31996-32113:1:exon

position:31996:1
position: 31996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32113:1
position: 32113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:33001-33119:1:exon

position:33001:1
position: 33001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33119:1
position: 33119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:34209-34266:1:exon

position:34209:1
position: 34209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34266:1
position: 34266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:34738-34788:1:exon

position:34738:1
position: 34738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34788:1
position: 34788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:35499-35591:1:exon

position:35499:1
position: 35499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35591:1
position: 35591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:36799-36927:1:exon

position:36799:1
position: 36799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36927:1
position: 36927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:37190-37296:1:exon

position:37190:1
position: 37190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37296:1
position: 37296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:37838-37982:1:exon

position:37838:1
position: 37838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37982:1
position: 37982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:40035-40237:1:exon

position:40035:1
position: 40035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100550977
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100550977
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 4-like
translation: MGLSEKLWHHQYWLPPGATWEDMRESADTHYPKPQDLWLCIPGALLLIVVRCVFERTIALPLGRRLGVRDKQRPKAQPSATLEGFYKLLGRIPKEEDLISVAKQSGLPVRAVQTWFRHRRAQDHPRLTKRFCEASWRFTFYFTSFFSGVALLYDKPWVWDHTVCWLKYPQQPLLPTLGWFYLLELSFYWSLVITLPFDVKRKDFKEQIIHHIATITLIFVSYCANLIRLGVMIMLVHDASDYLLELAKVLHYMKWKRVCEAVFIVFAVVFISSRLVIFPLITYYYYMTKFEMFFLSCLINAFLMVLQLLHIFWSYLILRMIFGVILYGAKKKDARSDTEESDGSEAEDAAKNE
SIO_010081: LOC100550977
subclass of: SO_0000673
so part of: LOC100550977
location: join(30741..30907,31996..32113,33001..33119,34209..34266,34738..34788,35499..35591,36799..36927,37190..37296,37838..37982,40035..40109)
location: region:30741-40109:1
so has part: feature:30741-30907:1:exon
so has part: feature:31996-32113:1:exon
so has part: feature:33001-33119:1:exon
so has part: feature:34209-34266:1:exon
so has part: feature:34738-34788:1:exon
so has part: feature:35499-35591:1:exon
so has part: feature:36799-36927:1:exon
so has part: feature:37190-37296:1:exon
so has part: feature:37838-37982:1:exon
so has part: feature:40035-40109:1:exon

XP_010723040.1
type: Protein
SIO_000068: ncbiprotein

position:30741:1
position: 30741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40109:1
position: 40109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30741-30907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31996-32113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:33001-33119:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34209-34266:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34738-34788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:35499-35591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:36799-36927:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:37190-37296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:37838-37982:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:40035-40109:1:exon

LOC104914634
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(42361..49103)
location: region:42361-49103:-1
so has part: feature:42361-49103:-1:exon
subclass of: SO_0000010

104914634
type: Gene
SIO_000068: ncbigene

position:42361:-1
position: 42361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49103:-1
position: 49103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42361-49103:-1:exon

LOC104914634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914634
product: kelch-like protein 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_010724737.3
SIO_010081: LOC104914634
subclass of: SO_0000673
so part of: LOC104914634
location: complement(join(42361..42715,45230..45641,46405..49103))
location: region:42361-49103:-1
so has part: feature:46405-49103:-1:exon
so has part: feature:45230-45641:-1:exon
so has part: feature:42361-42715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46405-49103:-1:exon

position:46405:-1
position: 46405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:45230-45641:-1:exon

position:45230:-1
position: 45230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45641:-1
position: 45641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:42361-42715:-1:exon

position:42715:-1
position: 42715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104914634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 24
translation: MSEGCVRTKLKLTARPSAAMGSAQELEELDSQAGAVADTVLEVGERLFQVSRGALSLHSRYFEAMFFGGTRESSEHHIVIRGIDAEPFQALLEFTRTAQVLIGQENVTSLLETADFFQFDRVKLLCEKFLERELHVSNCLGLMAYSQRFAFIELHASAMNVALTHWGDVMSQEEFKALPKETLMQFLKSDDLFVPREDVVFDSIMMWIMEDPETRERDFLDLVAEVRVGFLSLSFLDILVKRSKRPGQADTFSRLIRRLDSCPPPSWQNVMLCPCTSRSYDNLYVLGGKRDKEQQELFLFQPKTGTWQACSPLQRRNLTQYAVAAVGSFLFVTGGYFRDEFVWYSVDWVLIYNCLSNSWLEGPAMKKSRNSHCAVGVGLYLYVLGGNTDEGIIAEVERMALGDSEWESMSPMVQPVERGDAVSVGTRIYVVCGLDENGHVYDGVQRLNTETDSWDVISFSPLPRYDLCITSLNGALYTIGGEAFRFDVETDEWTHVNEECLTQKFFMGCCTVNGQIYLLGQRKGNSAIPIVVLFDPYVDMCQVIDNKLPCPLPIHGCVSVRRFDT
SIO_010081: LOC104914634
subclass of: SO_0000673
so part of: LOC104914634
location: complement(join(42409..42715,45230..45641,46405..47383))
location: region:42409-47383:-1
so has part: feature:46405-47383:-1:exon
so has part: feature:45230-45641:-1:exon
so has part: feature:42409-42715:-1:exon

XP_010723039.1
type: Protein
SIO_000068: ncbiprotein

position:42409:-1
position: 42409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47383:-1
position: 47383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46405-47383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:45230-45641:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:42409-42715:-1:exon

LSM7
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LSM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(49353..54945)
location: region:49353-54945:-1
so has part: feature:49353-54945:-1:exon
subclass of: SO_0000010

100550366
type: Gene
SIO_000068: ncbigene

position:49353:-1
position: 49353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54945:-1
position: 54945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49353-54945:-1:exon

LSM7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LSM7
product: LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003213151.4
SIO_010081: LSM7
subclass of: SO_0000673
so part of: LSM7
location: complement(join(49353..50399,52848..52919,54278..54368,54685..54945))
location: region:49353-54945:-1
so has part: feature:54685-54945:-1:exon
so has part: feature:54278-54368:-1:exon
so has part: feature:52848-52919:-1:exon
so has part: feature:49353-50399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54685-54945:-1:exon

position:54685:-1
position: 54685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:54278-54368:-1:exon

position:54278:-1
position: 54278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54368:-1
position: 54368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:52848-52919:-1:exon

position:52848:-1
position: 52848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52919:-1
position: 52919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:49353-50399:-1:exon

position:50399:-1
position: 50399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LSM7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LSM7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U6 snRNA-associated Sm-like protein LSm7
translation: MPGPPRRRPLLFLAGPGRAPSAPGIPATRPGSSAPEIKYRKSHLGGPQGANGLRRRETSLLVAVNEMANVGGGGGGVGKMADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDDQYKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
SIO_010081: LSM7
subclass of: SO_0000673
so part of: LSM7
location: complement(join(50257..50399,52848..52919,54278..54368,54685..54927))
location: region:50257-54927:-1
so has part: feature:54685-54927:-1:exon
so has part: feature:54278-54368:-1:exon
so has part: feature:52848-52919:-1:exon
so has part: feature:50257-50399:-1:exon

XP_003213199.2
type: Protein
SIO_000068: ncbiprotein

position:50257:-1
position: 50257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54927:-1
position: 54927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54685-54927:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:54278-54368:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:52848-52919:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:50257-50399:-1:exon

SPPL2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SPPL2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 54850..90932
location: region:54850-90932:1
so has part: feature:54850-90932:1:exon
subclass of: SO_0000010

100550519
type: Gene
SIO_000068: ncbigene

position:54850:1
position: 54850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90932:1
position: 90932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54850-90932:1:exon

SPPL2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SPPL2B
product: signal peptide peptidase like 2B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 192 samples with support for all annotated introns
transcript id: XM_003213152.4
SIO_010081: SPPL2B
subclass of: SO_0000673
so part of: SPPL2B
location: join(54850..54979,61502..61621,64893..65075,68927..69016,70468..70607,71301..71443,72247..72343,72502..72618,76757..76838,78072..78146,78275..78337,79595..79694,80345..80422,81896..82056,83768..90932)
location: region:54850-90932:1
so has part: feature:54850-54979:1:exon
so has part: feature:61502-61621:1:exon
so has part: feature:64893-65075:1:exon
so has part: feature:68927-69016:1:exon
so has part: feature:70468-70607:1:exon
so has part: feature:71301-71443:1:exon
so has part: feature:72247-72343:1:exon
so has part: feature:72502-72618:1:exon
so has part: feature:76757-76838:1:exon
so has part: feature:78072-78146:1:exon
so has part: feature:78275-78337:1:exon
so has part: feature:79595-79694:1:exon
so has part: feature:80345-80422:1:exon
so has part: feature:81896-82056:1:exon
so has part: feature:83768-90932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54850-54979:1:exon

position:54979:1
position: 54979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61502-61621:1:exon

position:61502:1
position: 61502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:61621:1
position: 61621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:64893-65075:1:exon

position:64893:1
position: 64893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65075:1
position: 65075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:68927-69016:1:exon

position:68927:1
position: 68927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69016:1
position: 69016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:70468-70607:1:exon

position:70468:1
position: 70468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70607:1
position: 70607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:71301-71443:1:exon

position:71301:1
position: 71301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71443:1
position: 71443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:72247-72343:1:exon

position:72247:1
position: 72247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72343:1
position: 72343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:72502-72618:1:exon

position:72502:1
position: 72502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72618:1
position: 72618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:76757-76838:1:exon

position:76757:1
position: 76757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:76838:1
position: 76838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:78072-78146:1:exon

position:78072:1
position: 78072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78146:1
position: 78146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:78275-78337:1:exon

position:78275:1
position: 78275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78337:1
position: 78337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:79595-79694:1:exon

position:79595:1
position: 79595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79694:1
position: 79694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:80345-80422:1:exon

position:80345:1
position: 80345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:80422:1
position: 80422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:81896-82056:1:exon

position:81896:1
position: 81896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82056:1
position: 82056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:83768-90932:1:exon

position:83768:1
position: 83768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPPL2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SPPL2B
product: signal peptide peptidase like 2B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_019609977.2
SIO_010081: SPPL2B
subclass of: SO_0000673
so part of: SPPL2B
location: join(54850..54979,61502..61621,64893..65075,68927..69016,70468..70607,71301..71443,72247..72343,72502..72618,76757..76838,78072..78146,78275..78337,79595..79694,80345..80422,81896..82056,83768..84011,84653..90932)
location: region:54850-90932:1
so has part: feature:54850-54979:1:exon
so has part: feature:61502-61621:1:exon
so has part: feature:64893-65075:1:exon
so has part: feature:68927-69016:1:exon
so has part: feature:70468-70607:1:exon
so has part: feature:71301-71443:1:exon
so has part: feature:72247-72343:1:exon
so has part: feature:72502-72618:1:exon
so has part: feature:76757-76838:1:exon
so has part: feature:78072-78146:1:exon
so has part: feature:78275-78337:1:exon
so has part: feature:79595-79694:1:exon
so has part: feature:80345-80422:1:exon
so has part: feature:81896-82056:1:exon
so has part: feature:83768-84011:1:exon
so has part: feature:84653-90932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54850-54979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61502-61621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64893-65075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68927-69016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70468-70607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71301-71443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72247-72343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72502-72618:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76757-76838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:78072-78146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78275-78337:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:79595-79694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80345-80422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81896-82056:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83768-84011:1:exon

position:84011:1
position: 84011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:84653-90932:1:exon

position:84653:1
position: 84653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPPL2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SPPL2B
product: signal peptide peptidase like 2B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_010724736.3
SIO_010081: SPPL2B
subclass of: SO_0000673
so part of: SPPL2B
location: join(54850..54979,61502..61621,64893..65075,68927..69016,70468..70607,71301..71443,72247..72343,72502..72618,76757..76838,78072..78146,78275..78337,79595..79694,80345..80422,81896..82124,83768..83871)
location: region:54850-83871:1
so has part: feature:54850-54979:1:exon
so has part: feature:61502-61621:1:exon
so has part: feature:64893-65075:1:exon
so has part: feature:68927-69016:1:exon
so has part: feature:70468-70607:1:exon
so has part: feature:71301-71443:1:exon
so has part: feature:72247-72343:1:exon
so has part: feature:72502-72618:1:exon
so has part: feature:76757-76838:1:exon
so has part: feature:78072-78146:1:exon
so has part: feature:78275-78337:1:exon
so has part: feature:79595-79694:1:exon
so has part: feature:80345-80422:1:exon
so has part: feature:81896-82124:1:exon
so has part: feature:83768-83871:1:exon

position:83871:1
position: 83871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54850-54979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61502-61621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64893-65075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68927-69016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70468-70607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71301-71443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72247-72343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72502-72618:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76757-76838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:78072-78146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78275-78337:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:79595-79694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80345-80422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81896-82124:1:exon

position:82124:1
position: 82124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:83768-83871:1:exon

SPPL2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SPPL2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptide peptidase-like 2B isoform X2
translation: MAARWAQLLLLPLLSLPQVYCEYGMVHVLSEKGSSKGKDYCILFNSQWAHLPHDLGKASLLQLQDQTASVLCSPSDVPDGGFNNRIPMVMRGNCTFYEKVRLAQINGARGLLIVSRERLVPPGGNRSQYEEIDIPVALLSYSDMLDIVKSFGRSVKGAMYAPNEPVLDYNMVIIFVMAVGTVAIGGYWAGSRDVKKRYMKHKRDDGAEKHDDETVDVTPIMICVFVVMCCSMLVLLYFFYDHLVYVIIGIFCLAASIGLYSCLSPFVRRFPLGKCRIPDNNLPYFHKRPQVRMLLLAVFCISVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKGCTLLLLVLFVYDVFFVFITPFLTKTGESIMVEVAAGPSDSATHEKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGIGLLVTFVALALMQMGQPALLYLVPCTLITSFAVALWRKELAMFWTGSGFAKDLPQPPLVIASVNCPQLPKDSNVPASQQETEDMANPTLHVKELHSPTLAAEEPADDTKTEQSEVSITKSEEPAGHKDDLESTCVGY
SIO_010081: SPPL2B
subclass of: SO_0000673
so part of: SPPL2B
location: join(54926..54979,61502..61621,64893..65075,68927..69016,70468..70607,71301..71443,72247..72343,72502..72618,76757..76838,78072..78146,78275..78337,79595..79694,80345..80422,81896..82056,83768..84011,84653..84672)
location: region:54926-84672:1
so has part: feature:54926-54979:1:exon
so has part: feature:61502-61621:1:exon
so has part: feature:64893-65075:1:exon
so has part: feature:68927-69016:1:exon
so has part: feature:70468-70607:1:exon
so has part: feature:71301-71443:1:exon
so has part: feature:72247-72343:1:exon
so has part: feature:72502-72618:1:exon
so has part: feature:76757-76838:1:exon
so has part: feature:78072-78146:1:exon
so has part: feature:78275-78337:1:exon
so has part: feature:79595-79694:1:exon
so has part: feature:80345-80422:1:exon
so has part: feature:81896-82056:1:exon
so has part: feature:83768-84011:1:exon
so has part: feature:84653-84672:1:exon

XP_019465522.1
type: Protein
SIO_000068: ncbiprotein

position:54926:1
position: 54926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84672:1
position: 84672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54926-54979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61502-61621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64893-65075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68927-69016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70468-70607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71301-71443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72247-72343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72502-72618:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76757-76838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:78072-78146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78275-78337:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:79595-79694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80345-80422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81896-82056:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83768-84011:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:84653-84672:1:exon

SPPL2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SPPL2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptide peptidase-like 2B isoform X1
translation: MAARWAQLLLLPLLSLPQVYCEYGMVHVLSEKGSSKGKDYCILFNSQWAHLPHDLGKASLLQLQDQTASVLCSPSDVPDGGFNNRIPMVMRGNCTFYEKVRLAQINGARGLLIVSRERLVPPGGNRSQYEEIDIPVALLSYSDMLDIVKSFGRSVKGAMYAPNEPVLDYNMVIIFVMAVGTVAIGGYWAGSRDVKKRYMKHKRDDGAEKHDDETVDVTPIMICVFVVMCCSMLVLLYFFYDHLVYVIIGIFCLAASIGLYSCLSPFVRRFPLGKCRIPDNNLPYFHKRPQVRMLLLAVFCISVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKGCTLLLLVLFVYDVFFVFITPFLTKTGESIMVEVAAGPSDSATHEKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGIGLLVTFVALALMQMGQPALLYLVPCTLITSFAVALWRKELAMFWTGSGFAKDLPQPPLVIASVNCPQLPKDSNVPASQQETEDMANPTLHVKELHSPTLAAEEPADDTKTEQSEVSITKSEEPAGHKDDLESKSLNLKQKQLE
SIO_010081: SPPL2B
subclass of: SO_0000673
so part of: SPPL2B
location: join(54926..54979,61502..61621,64893..65075,68927..69016,70468..70607,71301..71443,72247..72343,72502..72618,76757..76838,78072..78146,78275..78337,79595..79694,80345..80422,81896..82056,83768..84049)
location: region:54926-84049:1
so has part: feature:54926-54979:1:exon
so has part: feature:61502-61621:1:exon
so has part: feature:64893-65075:1:exon
so has part: feature:68927-69016:1:exon
so has part: feature:70468-70607:1:exon
so has part: feature:71301-71443:1:exon
so has part: feature:72247-72343:1:exon
so has part: feature:72502-72618:1:exon
so has part: feature:76757-76838:1:exon
so has part: feature:78072-78146:1:exon
so has part: feature:78275-78337:1:exon
so has part: feature:79595-79694:1:exon
so has part: feature:80345-80422:1:exon
so has part: feature:81896-82056:1:exon
so has part: feature:83768-84049:1:exon

XP_003213200.1
type: Protein
SIO_000068: ncbiprotein

position:84049:1
position: 84049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54926-54979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61502-61621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64893-65075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68927-69016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70468-70607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71301-71443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72247-72343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72502-72618:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76757-76838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:78072-78146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78275-78337:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:79595-79694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80345-80422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81896-82056:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:83768-84049:1:exon

SPPL2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SPPL2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptide peptidase-like 2B isoform X3
translation: MAARWAQLLLLPLLSLPQVYCEYGMVHVLSEKGSSKGKDYCILFNSQWAHLPHDLGKASLLQLQDQTASVLCSPSDVPDGGFNNRIPMVMRGNCTFYEKVRLAQINGARGLLIVSRERLVPPGGNRSQYEEIDIPVALLSYSDMLDIVKSFGRSVKGAMYAPNEPVLDYNMVIIFVMAVGTVAIGGYWAGSRDVKKRYMKHKRDDGAEKHDDETVDVTPIMICVFVVMCCSMLVLLYFFYDHLVYVIIGIFCLAASIGLYSCLSPFVRRFPLGKCRIPDNNLPYFHKRPQVRMLLLAVFCISVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKGCTLLLLVLFVYDVFFVFITPFLTKTGESIMVEVAAGPSDSATHEKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGIGLLVTFVALALMQMGQPALLYLVPCTLITSFAVALWRKELAMFWTGSGFAVNTSLI
SIO_010081: SPPL2B
subclass of: SO_0000673
so part of: SPPL2B
location: join(54926..54979,61502..61621,64893..65075,68927..69016,70468..70607,71301..71443,72247..72343,72502..72618,76757..76838,78072..78146,78275..78337,79595..79694,80345..80422,81896..82077)
location: region:54926-82077:1
so has part: feature:54926-54979:1:exon
so has part: feature:61502-61621:1:exon
so has part: feature:64893-65075:1:exon
so has part: feature:68927-69016:1:exon
so has part: feature:70468-70607:1:exon
so has part: feature:71301-71443:1:exon
so has part: feature:72247-72343:1:exon
so has part: feature:72502-72618:1:exon
so has part: feature:76757-76838:1:exon
so has part: feature:78072-78146:1:exon
so has part: feature:78275-78337:1:exon
so has part: feature:79595-79694:1:exon
so has part: feature:80345-80422:1:exon
so has part: feature:81896-82077:1:exon

XP_010723038.1
type: Protein
SIO_000068: ncbiprotein

position:82077:1
position: 82077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54926-54979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61502-61621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64893-65075:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:68927-69016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70468-70607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71301-71443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:72247-72343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:72502-72618:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76757-76838:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:78072-78146:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:78275-78337:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:79595-79694:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:80345-80422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:81896-82077:1:exon

HNRNPM
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HNRNPM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(94093..118689)
location: region:94093-118689:-1
so has part: feature:94093-118689:-1:exon
subclass of: SO_0000010

100550825
type: Gene
SIO_000068: ncbigene

position:94093:-1
position: 94093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118689:-1
position: 118689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:94093-118689:-1:exon

HNRNPM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HNRNPM
product: heterogeneous nuclear ribonucleoprotein M, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_010724745.2
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94093..94524,95466..95517,95783..95853,96511..96564,98078..98176,98656..98730,99106..99150,99731..99832,102063..102123,102511..102560,103414..103567,104523..104717,106313..106402,106912..107005,107092..107099,107933..107985,115398..115529))
location: region:94093-115529:-1
so has part: feature:115398-115529:-1:exon
so has part: feature:107933-107985:-1:exon
so has part: feature:107092-107099:-1:exon
so has part: feature:106912-107005:-1:exon
so has part: feature:106313-106402:-1:exon
so has part: feature:104523-104717:-1:exon
so has part: feature:103414-103567:-1:exon
so has part: feature:102511-102560:-1:exon
so has part: feature:102063-102123:-1:exon
so has part: feature:99731-99832:-1:exon
so has part: feature:99106-99150:-1:exon
so has part: feature:98656-98730:-1:exon
so has part: feature:98078-98176:-1:exon
so has part: feature:96511-96564:-1:exon
so has part: feature:95783-95853:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94093-94524:-1:exon

position:115529:-1
position: 115529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:115398-115529:-1:exon

position:115398:-1
position: 115398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107933-107985:-1:exon

position:107933:-1
position: 107933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107985:-1
position: 107985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107092-107099:-1:exon

position:107092:-1
position: 107092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107099:-1
position: 107099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:106912-107005:-1:exon

position:106912:-1
position: 106912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107005:-1
position: 107005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:106313-106402:-1:exon

position:106313:-1
position: 106313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106402:-1
position: 106402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:104523-104717:-1:exon

position:104523:-1
position: 104523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104717:-1
position: 104717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:103414-103567:-1:exon

position:103414:-1
position: 103414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103567:-1
position: 103567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:102511-102560:-1:exon

position:102511:-1
position: 102511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102560:-1
position: 102560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:102063-102123:-1:exon

position:102063:-1
position: 102063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102123:-1
position: 102123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:99731-99832:-1:exon

position:99731:-1
position: 99731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99832:-1
position: 99832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:99106-99150:-1:exon

position:99106:-1
position: 99106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99150:-1
position: 99150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:98656-98730:-1:exon

position:98656:-1
position: 98656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98730:-1
position: 98730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:98078-98176:-1:exon

position:98078:-1
position: 98078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98176:-1
position: 98176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:96511-96564:-1:exon

position:96511:-1
position: 96511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96564:-1
position: 96564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:95783-95853:-1:exon

position:95783:-1
position: 95783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95853:-1
position: 95853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:95466-95517:-1:exon

position:95466:-1
position: 95466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95517:-1
position: 95517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:94093-94524:-1:exon

position:94524:-1
position: 94524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HNRNPM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HNRNPM
product: heterogeneous nuclear ribonucleoprotein M, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_010724744.2
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94093..94524,95466..95517,95783..95865,96511..96564,98078..98176,98656..98730,99106..99150,99731..99832,102063..102123,102511..102560,103414..103567,104523..104717,106313..106402,106912..107005,107092..107099,107933..107985,115398..115529))
location: region:94093-115529:-1
so has part: feature:115398-115529:-1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
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SIO_000300: 13
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SIO_000300: 14
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urn:…
SIO_000300: 15
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position:95865:-1
position: 95865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 17
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HNRNPM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HNRNPM
product: heterogeneous nuclear ribonucleoprotein M, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_010724743.2
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94287..94524,95466..95517,95783..96564,98078..98176,98656..98730,99106..99150,102063..102123,102511..102560,103414..103567,104523..104717,106912..107005,107092..107099,107933..107985,115398..115567,118665..118689))
location: region:94287-118689:-1
so has part: feature:118665-118689:-1:exon
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so has part: feature:95783-96564:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94287-94524:-1:exon

position:94287:-1
position: 94287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118665-118689:-1:exon

position:118665:-1
position: 118665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:115398-115567:-1:exon

position:115567:-1
position: 115567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107933-107985:-1:exon

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SIO_000300: 4
SIO_000628: feature:107092-107099:-1:exon

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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 13
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urn:…
SIO_000300: 14
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94287-94524:-1:exon

HNRNPM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HNRNPM
product: heterogeneous nuclear ribonucleoprotein M, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_010724742.2
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94287..94524,95466..95517,95783..96564,98078..98176,98656..98730,99106..99150,99731..99832,102063..102123,102511..102560,103414..103567,104523..104717,106912..107005,107092..107099,107933..107985,115398..115567,118665..118689))
location: region:94287-118689:-1
so has part: feature:118665-118689:-1:exon
so has part: feature:115398-115567:-1:exon
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so has part: feature:95783-96564:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94287-94524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118665-118689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115398-115567:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 10
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SIO_000300: 11
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SIO_000300: 12
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SIO_000300: 13
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SIO_000300: 14
SIO_000628: feature:95783-96564:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94287-94524:-1:exon

HNRNPM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HNRNPM
product: heterogeneous nuclear ribonucleoprotein M, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_010724741.2
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94287..94524,95466..95517,95783..96564,98078..98176,98656..98730,99106..99150,99731..99832,102063..102123,102511..102560,103414..103567,104523..104717,106313..106402,106912..107005,107092..107099,107933..107985,115398..115567,118665..118689))
location: region:94287-118689:-1
so has part: feature:118665-118689:-1:exon
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so has part: feature:98656-98730:-1:exon
so has part: feature:98078-98176:-1:exon
so has part: feature:95783-96564:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94287-94524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118665-118689:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:115398-115567:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 13
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urn:…
SIO_000300: 17
SIO_000628: feature:94287-94524:-1:exon

HNRNPM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HNRNPM
product: heterogeneous nuclear ribonucleoprotein M, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_010724739.3
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94287..94524,95466..95517,95783..96564,98078..98176,98656..98730,99106..99150,99731..99832,102063..102123,102511..102560,103414..103567,104523..104717,106313..106399,106912..107005,107092..107099,107933..107985,115398..115529))
location: region:94287-115529:-1
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so has part: feature:98078-98176:-1:exon
so has part: feature:95783-96564:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94287-94524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:115398-115529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107933-107985:-1:exon

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urn:…
SIO_000300: 5
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position:106399:-1
position: 106399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:104523-104717:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103414-103567:-1:exon

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SIO_000300: 8
SIO_000628: feature:102511-102560:-1:exon

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SIO_000300: 10
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SIO_000300: 12
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SIO_000300: 13
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SIO_000300: 15
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94287-94524:-1:exon

HNRNPM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HNRNPM
product: heterogeneous nuclear ribonucleoprotein M, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_010724740.3
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94287..94524,95466..95517,95783..96564,98078..98176,98656..98730,99106..99150,102063..102123,102511..102560,103414..103567,104523..104717,106313..106402,106912..107005,107092..107099,107933..107985,115398..115529))
location: region:94287-115529:-1
so has part: feature:115398-115529:-1:exon
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so has part: feature:95466-95517:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:115398-115529:-1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:107092-107099:-1:exon

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SIO_000300: 4
SIO_000628: feature:106912-107005:-1:exon

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SIO_000300: 5
SIO_000628: feature:106313-106402:-1:exon

urn:…
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urn:…
SIO_000300: 7
SIO_000628: feature:103414-103567:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102511-102560:-1:exon

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SIO_000300: 9
SIO_000628: feature:102063-102123:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99106-99150:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98656-98730:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:98078-98176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95783-96564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94287-94524:-1:exon

HNRNPM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HNRNPM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein M isoform X5
translation: MDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLGGRPLKVKEDPDGEHARRAMQKVMAAGGMGIGPGPGGPGMINIPPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGAVVRADILEDKDGKSRGIGTVTFEQAIEAVQAISMFNGQLLFDRPMHVKMDERAFPKGDFFPPERPQQLPRMGMEGMGFGMNKMGGMEGPFGGMENIGRFPAGMNMGRMSEMDRAMGGGFEREFGRNEMGMSRSFGETLERGIGGGNASIPGIERMAPGIDRMGSGIERIPSGMGHGMERVGSEIDRMGLVLDRMSSNVDRIGSGIDRMAPLGIDHIAPNIERMGPAIERMGSGIERMGSGIGFGIERMGAAIDRVGTTMDRMGSGVERMGSGMDRMGIGMERMVPAGMGTGMGQVIERMPAGLDRIGATPMERIGIDRMGAASMERMGLERIGATNMERMGPAMGQGMGAGIDRMGLAMGSNFERTMEMERGNFAGNFAGSLGGTGGPAAGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVRFESPEVAERACRMMNGIQLRGREIDVRIDRNA
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94361..94524,95466..95517,95783..96564,98078..98176,98656..98730,99106..99150,102063..102123,102511..102560,103414..103567,104523..104717,106912..107005,107092..107099,107933..107956))
location: region:94361-107956:-1
so has part: feature:107933-107956:-1:exon
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so has part: feature:94361-94524:-1:exon

XP_010723045.1
type: Protein
SIO_000068: ncbiprotein

position:94361:-1
position: 94361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107956:-1
position: 107956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107933-107956:-1:exon

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SIO_000300: 2
SIO_000628: feature:107092-107099:-1:exon

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SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:104523-104717:-1:exon

urn:…
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:102063-102123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99106-99150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98656-98730:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98078-98176:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95783-96564:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:94361-94524:-1:exon

HNRNPM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HNRNPM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein M isoform X4
translation: MDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLGGRPLKVKEDPDGEHARRAMQKVMAAGGMGIGPGPGGPGMINIPPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGAVVRADILEDKDGKSRGIGTVTFEQAIEAVQAISMFNGQLLFDRPMHVKMDERAFPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGMGMGNMGPGGMGMEGMGFGMNKMGGMEGPFGGMENIGRFPAGMNMGRMSEMDRAMGGGFEREFGRNEMGMSRSFGETLERGIGGGNASIPGIERMAPGIDRMGSGIERIPSGMGHGMERVGSEIDRMGLVLDRMSSNVDRIGSGIDRMAPLGIDHIAPNIERMGPAIERMGSGIERMGSGIGFGIERMGAAIDRVGTTMDRMGSGVERMGSGMDRMGIGMERMVPAGMGTGMGQVIERMPAGLDRIGATPMERIGIDRMGAASMERMGLERIGATNMERMGPAMGQGMGAGIDRMGLAMGSNFERTMEMERGNFAGNFAGSLGGTGGPAAGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVRFESPEVAERACRMMNGIQLRGREIDVRIDRNA
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94361..94524,95466..95517,95783..96564,98078..98176,98656..98730,99106..99150,99731..99832,102063..102123,102511..102560,103414..103567,104523..104717,106912..107005,107092..107099,107933..107956))
location: region:94361-107956:-1
so has part: feature:107933-107956:-1:exon
so has part: feature:107092-107099:-1:exon
so has part: feature:106912-107005:-1:exon
so has part: feature:104523-104717:-1:exon
so has part: feature:103414-103567:-1:exon
so has part: feature:102511-102560:-1:exon
so has part: feature:102063-102123:-1:exon
so has part: feature:99731-99832:-1:exon
so has part: feature:99106-99150:-1:exon
so has part: feature:98656-98730:-1:exon
so has part: feature:98078-98176:-1:exon
so has part: feature:95783-96564:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94361-94524:-1:exon

XP_010723044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107933-107956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107092-107099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106912-107005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104523-104717:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:103414-103567:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102511-102560:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102063-102123:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:99731-99832:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99106-99150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98656-98730:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98078-98176:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95783-96564:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:94361-94524:-1:exon

HNRNPM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HNRNPM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein M isoform X1
translation: MDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLGGRPLKVKELRTCSYIKGPIKQKSRETSSVLTVTLGRRDPDGEHARRAMQKVMAAGGMGIGPGPGGPGMINIPPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGAVVRADILEDKDGKSRGIGTVTFEQAIEAVQAISMFNGQLLFDRPMHVKMDERAFPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGMGMGNMGPGGMGMEGMGFGMNKMGGMEGPFGGMENIGRFPAGMNMGRMSEMDRAMGGGFEREFGRNEMGMSRSFGETLERGIGGGNASIPGIERMAPGIDRMGSGIERIPSGMGHGMERVGSEIDRMGLVLDRMSSNVDRIGSGIDRMAPLGIDHIAPNIERMGPAIERMGSGIERMGSGIGFGIERMGAAIDRVGTTMDRMGSGVERMGSGMDRMGIGMERMVPAGMGTGMGQVIERMPAGLDRIGATPMERIGIDRMGAASMERMGLERIGATNMERMGPAMGQGMGAGIDRMGLAMGSNFERTMEMERGNFAGNFAGSLGGTGGPAAGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVRFESPEVAERACRMMNGIQLRGREIDVRIDRNA
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94361..94524,95466..95517,95783..96564,98078..98176,98656..98730,99106..99150,99731..99832,102063..102123,102511..102560,103414..103567,104523..104717,106313..106399,106912..107005,107092..107099,107933..107956))
location: region:94361-107956:-1
so has part: feature:107933-107956:-1:exon
so has part: feature:107092-107099:-1:exon
so has part: feature:106912-107005:-1:exon
so has part: feature:106313-106399:-1:exon
so has part: feature:104523-104717:-1:exon
so has part: feature:103414-103567:-1:exon
so has part: feature:102511-102560:-1:exon
so has part: feature:102063-102123:-1:exon
so has part: feature:99731-99832:-1:exon
so has part: feature:99106-99150:-1:exon
so has part: feature:98656-98730:-1:exon
so has part: feature:98078-98176:-1:exon
so has part: feature:95783-96564:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94361-94524:-1:exon

XP_010723041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107933-107956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107092-107099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106912-107005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106313-106399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104523-104717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103414-103567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102511-102560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102063-102123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99731-99832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99106-99150:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98656-98730:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:98078-98176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95783-96564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94361-94524:-1:exon

HNRNPM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HNRNPM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein M isoform X2
translation: MDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLGGRPLKVKEQLRTCSYIKGPIKQKSRETSSVLTVTLGRRDPDGEHARRAMQKVMAAGGMGIGPGPGGPGMINIPPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGAVVRADILEDKDGKSRGIGTVTFEQAIEAVQAISMFNGQLLFDRPMHVKMDERAFPKGDFFPPERPQQLPRMGMEGMGFGMNKMGGMEGPFGGMENIGRFPAGMNMGRMSEMDRAMGGGFEREFGRNEMGMSRSFGETLERGIGGGNASIPGIERMAPGIDRMGSGIERIPSGMGHGMERVGSEIDRMGLVLDRMSSNVDRIGSGIDRMAPLGIDHIAPNIERMGPAIERMGSGIERMGSGIGFGIERMGAAIDRVGTTMDRMGSGVERMGSGMDRMGIGMERMVPAGMGTGMGQVIERMPAGLDRIGATPMERIGIDRMGAASMERMGLERIGATNMERMGPAMGQGMGAGIDRMGLAMGSNFERTMEMERGNFAGNFAGSLGGTGGPAAGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVRFESPEVAERACRMMNGIQLRGREIDVRIDRNA
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94361..94524,95466..95517,95783..96564,98078..98176,98656..98730,99106..99150,102063..102123,102511..102560,103414..103567,104523..104717,106313..106402,106912..107005,107092..107099,107933..107956))
location: region:94361-107956:-1
so has part: feature:107933-107956:-1:exon
so has part: feature:107092-107099:-1:exon
so has part: feature:106912-107005:-1:exon
so has part: feature:106313-106402:-1:exon
so has part: feature:104523-104717:-1:exon
so has part: feature:103414-103567:-1:exon
so has part: feature:102511-102560:-1:exon
so has part: feature:102063-102123:-1:exon
so has part: feature:99106-99150:-1:exon
so has part: feature:98656-98730:-1:exon
so has part: feature:98078-98176:-1:exon
so has part: feature:95783-96564:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94361-94524:-1:exon

XP_010723042.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107933-107956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107092-107099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106912-107005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106313-106402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104523-104717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103414-103567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102511-102560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102063-102123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99106-99150:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:98656-98730:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98078-98176:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:95783-96564:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:94361-94524:-1:exon

HNRNPM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HNRNPM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein M isoform X7
translation: MDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLGGRPLKVKEQLRTCSYIKGPIKQKSRETSSVLTVTLGRRDPDGEHARRAMQKVMAAGGMGIGPGPGGPGMINIPPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGAVVRADILEDKDGKSRGIGTVTFEQAIEAVQAISMFNGQLLFDRPMHVKMDERAFPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGMGMGNMGPGGMGMEGMGFGMNKMGGMEGPFGGMENIGRFPAGMNMGRMSEMDRAMGGGFEREFGRNEMGMSRSFGETLERGIGGGNASIPGIERMAPGIDRSLGGTGGPAAGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVRFESPEVAERACRMMNGIQLRGREIDVRIDRNA
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94361..94524,95466..95517,95783..95853,96511..96564,98078..98176,98656..98730,99106..99150,99731..99832,102063..102123,102511..102560,103414..103567,104523..104717,106313..106402,106912..107005,107092..107099,107933..107956))
location: region:94361-107956:-1
so has part: feature:107933-107956:-1:exon
so has part: feature:107092-107099:-1:exon
so has part: feature:106912-107005:-1:exon
so has part: feature:106313-106402:-1:exon
so has part: feature:104523-104717:-1:exon
so has part: feature:103414-103567:-1:exon
so has part: feature:102511-102560:-1:exon
so has part: feature:102063-102123:-1:exon
so has part: feature:99731-99832:-1:exon
so has part: feature:99106-99150:-1:exon
so has part: feature:98656-98730:-1:exon
so has part: feature:98078-98176:-1:exon
so has part: feature:96511-96564:-1:exon
so has part: feature:95783-95853:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94361-94524:-1:exon

XP_010723047.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107933-107956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107092-107099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106912-107005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106313-106402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104523-104717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103414-103567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102511-102560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102063-102123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99731-99832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99106-99150:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98656-98730:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:98078-98176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96511-96564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95783-95853:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94361-94524:-1:exon

HNRNPM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HNRNPM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein M isoform X6
translation: MDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLGGRPLKVKEQLRTCSYIKGPIKQKSRETSSVLTVTLGRRDPDGEHARRAMQKVMAAGGMGIGPGPGGPGMINIPPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGAVVRADILEDKDGKSRGIGTVTFEQAIEAVQAISMFNGQLLFDRPMHVKMDERAFPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGMGMGNMGPGGMGMEGMGFGMNKMGGMEGPFGGMENIGRFPAGMNMGRMSEMDRAMGGGFEREFGRNEMGMSRSFGETLERGIGGGNASIPGIERMAPGIDRNFAGSLGGTGGPAAGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVRFESPEVAERACRMMNGIQLRGREIDVRIDRNA
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94361..94524,95466..95517,95783..95865,96511..96564,98078..98176,98656..98730,99106..99150,99731..99832,102063..102123,102511..102560,103414..103567,104523..104717,106313..106402,106912..107005,107092..107099,107933..107956))
location: region:94361-107956:-1
so has part: feature:107933-107956:-1:exon
so has part: feature:107092-107099:-1:exon
so has part: feature:106912-107005:-1:exon
so has part: feature:106313-106402:-1:exon
so has part: feature:104523-104717:-1:exon
so has part: feature:103414-103567:-1:exon
so has part: feature:102511-102560:-1:exon
so has part: feature:102063-102123:-1:exon
so has part: feature:99731-99832:-1:exon
so has part: feature:99106-99150:-1:exon
so has part: feature:98656-98730:-1:exon
so has part: feature:98078-98176:-1:exon
so has part: feature:96511-96564:-1:exon
so has part: feature:95783-95865:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94361-94524:-1:exon

XP_010723046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107933-107956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107092-107099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106912-107005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106313-106402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104523-104717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103414-103567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102511-102560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102063-102123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99731-99832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99106-99150:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98656-98730:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:98078-98176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96511-96564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95783-95865:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94361-94524:-1:exon

HNRNPM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HNRNPM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoprotein M isoform X3
translation: MDAEGKSRGCAVVEFKMEESMKKAAEVLNKHSLGGRPLKVKEQLRTCSYIKGPIKQKSRETSSVLTVTLGRRDPDGEHARRAMQKVMAAGGMGIGPGPGGPGMINIPPSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGAVVRADILEDKDGKSRGIGTVTFEQAIEAVQAISMFNGQLLFDRPMHVKMDERAFPKGDFFPPERPQQLPHGLGGIGMGLGPGGQPIDANHLNKGMGMGNMGPGGMGMEGMGFGMNKMGGMEGPFGGMENIGRFPAGMNMGRMSEMDRAMGGGFEREFGRNEMGMSRSFGETLERGIGGGNASIPGIERMAPGIDRMGSGIERIPSGMGHGMERVGSEIDRMGLVLDRMSSNVDRIGSGIDRMAPLGIDHIAPNIERMGPAIERMGSGIERMGSGIGFGIERMGAAIDRVGTTMDRMGSGVERMGSGMDRMGIGMERMVPAGMGTGMGQVIERMPAGLDRIGATPMERIGIDRMGAASMERMGLERIGATNMERMGPAMGQGMGAGIDRMGLAMGSNFERTMEMERGNFAGNFAGSLGGTGGPAAGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVRFESPEVAERACRMMNGIQLRGREIDVRIDRNA
SIO_010081: HNRNPM
subclass of: SO_0000673
so part of: HNRNPM
location: complement(join(94361..94524,95466..95517,95783..96564,98078..98176,98656..98730,99106..99150,99731..99832,102063..102123,102511..102560,103414..103567,104523..104717,106313..106402,106912..107005,107092..107099,107933..107956))
location: region:94361-107956:-1
so has part: feature:107933-107956:-1:exon
so has part: feature:107092-107099:-1:exon
so has part: feature:106912-107005:-1:exon
so has part: feature:106313-106402:-1:exon
so has part: feature:104523-104717:-1:exon
so has part: feature:103414-103567:-1:exon
so has part: feature:102511-102560:-1:exon
so has part: feature:102063-102123:-1:exon
so has part: feature:99731-99832:-1:exon
so has part: feature:99106-99150:-1:exon
so has part: feature:98656-98730:-1:exon
so has part: feature:98078-98176:-1:exon
so has part: feature:95783-96564:-1:exon
so has part: feature:95466-95517:-1:exon
so has part: feature:94361-94524:-1:exon

XP_010723043.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:107933-107956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107092-107099:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:106912-107005:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106313-106402:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104523-104717:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:103414-103567:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102511-102560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102063-102123:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:99731-99832:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99106-99150:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98656-98730:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:98078-98176:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95783-96564:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:95466-95517:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94361-94524:-1:exon

TIMM44
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TIMM44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(121607..140883)
location: region:121607-140883:-1
so has part: feature:121607-140883:-1:exon
subclass of: SO_0000010

100550214
type: Gene
SIO_000068: ncbigene

position:121607:-1
position: 121607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140883:-1
position: 140883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121607-140883:-1:exon

TIMM44
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TIMM44
product: translocase of inner mitochondrial membrane 44
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003213150.3
SIO_010081: TIMM44
subclass of: SO_0000673
so part of: TIMM44
location: complement(join(121607..122368,126425..126535,130345..130434,132502..132552,133183..133307,133629..133721,136492..136577,137028..137167,137705..137854,138844..138924,139555..139725,140107..140214,140582..140746,140854..140883))
location: region:121607-140883:-1
so has part: feature:140854-140883:-1:exon
so has part: feature:140582-140746:-1:exon
so has part: feature:140107-140214:-1:exon
so has part: feature:139555-139725:-1:exon
so has part: feature:138844-138924:-1:exon
so has part: feature:137705-137854:-1:exon
so has part: feature:137028-137167:-1:exon
so has part: feature:136492-136577:-1:exon
so has part: feature:133629-133721:-1:exon
so has part: feature:133183-133307:-1:exon
so has part: feature:132502-132552:-1:exon
so has part: feature:130345-130434:-1:exon
so has part: feature:126425-126535:-1:exon
so has part: feature:121607-122368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140854-140883:-1:exon

position:140854:-1
position: 140854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140582-140746:-1:exon

position:140582:-1
position: 140582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140746:-1
position: 140746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:140107-140214:-1:exon

position:140107:-1
position: 140107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140214:-1
position: 140214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:139555-139725:-1:exon

position:139555:-1
position: 139555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139725:-1
position: 139725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:138844-138924:-1:exon

position:138844:-1
position: 138844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138924:-1
position: 138924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:137705-137854:-1:exon

position:137705:-1
position: 137705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137854:-1
position: 137854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:137028-137167:-1:exon

position:137028:-1
position: 137028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137167:-1
position: 137167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:136492-136577:-1:exon

position:136492:-1
position: 136492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136577:-1
position: 136577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:133629-133721:-1:exon

position:133629:-1
position: 133629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133721:-1
position: 133721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:133183-133307:-1:exon

position:133183:-1
position: 133183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133307:-1
position: 133307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:132502-132552:-1:exon

position:132502:-1
position: 132502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132552:-1
position: 132552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:130345-130434:-1:exon

position:130345:-1
position: 130345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:130434:-1
position: 130434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:126425-126535:-1:exon

position:126425:-1
position: 126425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126535:-1
position: 126535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:121607-122368:-1:exon

position:122368:-1
position: 122368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TIMM44
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TIMM44
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial import inner membrane translocase subunit TIM44
translation: MYHSNSVGKIPGEPRVRRSVGRGRLLLLLSPSAARVFDSRGCSPLPRPYPHRRFLSEAAQRPELRKCLISGMWLMPRRYPVPAVHSGAVYRASRPVSEINQSRCYSSGGRKGFISGFVENIKQELAKNKEMKESIKKFRDEAKKLEESDALREARRKYKTIESETVKTSEVIKKKLEEITGTVKESLDEVSKSDIGRKIKEGVEEAAKTAKQSAESVTKGGEKLGKTAAFKAISQGVETVKKEIDESVLGQTGPYKRPERLRKRTEFSGERIKEERIFEANEEAMGMVLHKDSRWYQQWKDFKDNNVVFNRFFEMKMKYDESDNAFIRASRAVTDKVTDLIGGLFSKTEMSEVLTEILKVDPSFDKDRFLKQCERDIIPNVLEAMISGELDILKDWCYEATYSQLAHPIQQAKAMGLQFHSRILDIDNIDLAMGKMMEQGPVLIITFQAQVVMVIKNQKGEVVEGDPDKVLRMLYVWALCRDQDELNPYAAWRLLDISSSSSEQVL
SIO_010081: TIMM44
subclass of: SO_0000673
so part of: TIMM44
location: complement(join(122249..122368,126425..126535,130345..130434,132502..132552,133183..133307,133629..133721,136492..136577,137028..137167,137705..137854,138844..138924,139555..139725,140107..140214,140582..140746,140854..140883))
location: region:122249-140883:-1
so has part: feature:140854-140883:-1:exon
so has part: feature:140582-140746:-1:exon
so has part: feature:140107-140214:-1:exon
so has part: feature:139555-139725:-1:exon
so has part: feature:138844-138924:-1:exon
so has part: feature:137705-137854:-1:exon
so has part: feature:137028-137167:-1:exon
so has part: feature:136492-136577:-1:exon
so has part: feature:133629-133721:-1:exon
so has part: feature:133183-133307:-1:exon
so has part: feature:132502-132552:-1:exon
so has part: feature:130345-130434:-1:exon
so has part: feature:126425-126535:-1:exon
so has part: feature:122249-122368:-1:exon

XP_003213198.2
type: Protein
SIO_000068: ncbiprotein

position:122249:-1
position: 122249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140854-140883:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140582-140746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:140107-140214:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139555-139725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:138844-138924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137705-137854:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:137028-137167:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:136492-136577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:133629-133721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:133183-133307:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:132502-132552:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:130345-130434:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:126425-126535:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:122249-122368:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 141232..141331
location: region:141232-141331:1
so has part: feature:141232-141331:1:region

position:141232:1
position: 141232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141331:1
position: 141331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141232-141331:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 167406..167505
location: region:167406-167505:1
so has part: feature:167406-167505:1:region

position:167406:1
position: 167406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167505:1
position: 167505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167406-167505:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 168809..168908
location: region:168809-168908:1
so has part: feature:168809-168908:1:region

position:168809:1
position: 168809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168908:1
position: 168908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168809-168908:1:region

LOC100539644
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100539644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 171823..189283
location: region:171823-189283:1
so has part: feature:171823-189283:1:exon
subclass of: SO_0000010

100539644
type: Gene
SIO_000068: ncbigene

position:171823:1
position: 171823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189283:1
position: 189283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171823-189283:1:exon

LOC100539644
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100539644
product: ceramide synthase 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019609940.1
SIO_010081: LOC100539644
subclass of: SO_0000673
so part of: LOC100539644
location: join(171823..171858,172570..172688,175592..175649,178925..178975,182139..182231,183412..183540,183813..183919,184324..184480,188299..189283)
location: region:171823-189283:1
so has part: feature:171823-171858:1:exon
so has part: feature:172570-172688:1:exon
so has part: feature:175592-175649:1:exon
so has part: feature:178925-178975:1:exon
so has part: feature:182139-182231:1:exon
so has part: feature:183412-183540:1:exon
so has part: feature:183813-183919:1:exon
so has part: feature:184324-184480:1:exon
so has part: feature:188299-189283:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171823-171858:1:exon

position:171858:1
position: 171858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172570-172688:1:exon

position:172570:1
position: 172570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172688:1
position: 172688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:175592-175649:1:exon

position:175592:1
position: 175592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175649:1
position: 175649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:178925-178975:1:exon

position:178925:1
position: 178925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178975:1
position: 178975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:182139-182231:1:exon

position:182139:1
position: 182139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182231:1
position: 182231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:183412-183540:1:exon

position:183412:1
position: 183412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183540:1
position: 183540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:183813-183919:1:exon

position:183813:1
position: 183813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183919:1
position: 183919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:184324-184480:1:exon

position:184324:1
position: 184324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184480:1
position: 184480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:188299-189283:1:exon

position:188299:1
position: 188299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100539644
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100539644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 4-like
translation: MVVDTDLYSTLRGELISLAKQCDLPVRKVERWFRRRRNTDRPSLSKKFCEACWRFAFYIVSFFTGLAVLYDKPWLWDHRECWTGYPQQPLQPSLFWYYMLELSFYCSLVFTLPFDVKRKDFKEQIVHHAATIFLISFSYCANYIRIGTLVMVIHDASDCFLEPTKIFNYMKWKKTCDSLFMIFSAVFLISRLVIFPYTVLYNTYYYSMEIFQPFFGYYFVNALLITLQLLHIFWSCLIIHMVYKFMLQGTMEKDMRSETEESDVDEERENMEKEKNGIAHFSNVTSSNYIQRNGSEPLNNRAHLTNGHIKER
SIO_010081: LOC100539644
subclass of: SO_0000673
so part of: LOC100539644
location: join(171823..171858,172570..172688,175592..175649,178925..178975,182139..182231,183412..183540,183813..183919,184324..184480,188299..188487)
location: region:171823-188487:1
so has part: feature:171823-171858:1:exon
so has part: feature:172570-172688:1:exon
so has part: feature:175592-175649:1:exon
so has part: feature:178925-178975:1:exon
so has part: feature:182139-182231:1:exon
so has part: feature:183412-183540:1:exon
so has part: feature:183813-183919:1:exon
so has part: feature:184324-184480:1:exon
so has part: feature:188299-188487:1:exon

XP_019465485.1
type: Protein
SIO_000068: ncbiprotein

position:188487:1
position: 188487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171823-171858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172570-172688:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:175592-175649:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178925-178975:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182139-182231:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183412-183540:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183813-183919:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:184324-184480:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:188299-188487:1:exon

LOC104914636
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(358343..370682)
location: region:358343-370682:-1
so has part: feature:358343-370682:-1:exon
subclass of: SO_0000010

104914636
type: Gene
SIO_000068: ncbigene

position:358343:-1
position: 358343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370682:-1
position: 370682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358343-370682:-1:exon

LOC104914636
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914636
product: fibrillin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_031557093.1
SIO_010081: LOC104914636
subclass of: SO_0000673
so part of: LOC104914636
location: complement(join(358343..358568,362449..362544,368147..368245,370523..370682))
location: region:358343-370682:-1
so has part: feature:370523-370682:-1:exon
so has part: feature:368147-368245:-1:exon
so has part: feature:362449-362544:-1:exon
so has part: feature:358343-358568:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:370523-370682:-1:exon

position:370523:-1
position: 370523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:368147-368245:-1:exon

position:368147:-1
position: 368147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368245:-1
position: 368245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362449-362544:-1:exon

position:362449:-1
position: 362449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362544:-1
position: 362544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:358343-358568:-1:exon

position:358568:-1
position: 358568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104914636
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914636
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrillin-2-like
translation: MYRISSGAFQKQRKKLFLIFRPNVCGSRFHSYCCPGWKTLPGGNQCIVPICRNSCGDGFCSRPNMCTCSNGQLSPNCGSTGVQTCNVRCMNGGSCNEESCLCQKGYTGTYCGQPVCENSCQNGGRCIGPNRCACVYGFTGPQCERGKKHLHIITD
SIO_010081: LOC104914636
subclass of: SO_0000673
so part of: LOC104914636
location: complement(join(358441..358568,362449..362544,368147..368245,370523..370667))
location: region:358441-370667:-1
so has part: feature:370523-370667:-1:exon
so has part: feature:368147-368245:-1:exon
so has part: feature:362449-362544:-1:exon
so has part: feature:358441-358568:-1:exon

XP_031412953.1
type: Protein
SIO_000068: ncbiprotein

position:358441:-1
position: 358441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370667:-1
position: 370667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370523-370667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:368147-368245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362449-362544:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358441-358568:-1:exon

LOC104914637
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(399688..415953)
location: region:399688-415953:-1
so has part: feature:399688-415953:-1:exon
subclass of: SO_0000010

104914637
type: Gene
SIO_000068: ncbigene

position:399688:-1
position: 399688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415953:-1
position: 415953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:399688-415953:-1:exon

LOC104914637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914637
product: fibrillin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_031557097.1
SIO_010081: LOC104914637
subclass of: SO_0000673
so part of: LOC104914637
location: complement(join(399688..400097,413565..413690,415760..415953))
location: region:399688-415953:-1
so has part: feature:415760-415953:-1:exon
so has part: feature:413565-413690:-1:exon
so has part: feature:399688-400097:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:415760-415953:-1:exon

position:415760:-1
position: 415760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413565-413690:-1:exon

position:413565:-1
position: 413565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413690:-1
position: 413690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:399688-400097:-1:exon

position:400097:-1
position: 400097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104914637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrillin-1-like
translation: MCQGQLSGIVCTKTMCCATIGRAWGHPCEMCPAQPHPCRRGFIPNIRTGACQDVDECQAIPGLCQGGNCINTVGSYECKCPAGHKQSETSHRCEDVDECGTISGVCDGGECTNTAGSYVCTCPRGFMTSHDGSRCIGKMLTILETQTSHHDSDL
SIO_010081: LOC104914637
subclass of: SO_0000673
so part of: LOC104914637
location: complement(join(399916..400097,413565..413690,415760..415916))
location: region:399916-415916:-1
so has part: feature:415760-415916:-1:exon
so has part: feature:413565-413690:-1:exon
so has part: feature:399916-400097:-1:exon

XP_031412957.1
type: Protein
SIO_000068: ncbiprotein

position:399916:-1
position: 399916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415916:-1
position: 415916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:415760-415916:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413565-413690:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:399916-400097:-1:exon

LOC100539490
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100539490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(425048..441175)
location: region:425048-441175:-1
so has part: feature:425048-441175:-1:exon
subclass of: SO_0000010

100539490
type: Gene
SIO_000068: ncbigene

position:425048:-1
position: 425048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441175:-1
position: 441175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425048-441175:-1:exon

LOC100539490
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100539490
product: fibrillin-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010724748.3
SIO_010081: LOC100539490
subclass of: SO_0000673
so part of: LOC100539490
location: complement(join(425048..427163,427546..427671,427819..428046,428741..428866,429348..429398,429478..429615,430361..430480,431272..431397,432296..432421,433880..433933,434343..434618,435295..435417,435988..436113,438325..438444,439037..439180,439813..440010,440693..441175))
location: region:425048-441175:-1
so has part: feature:440693-441175:-1:exon
so has part: feature:439813-440010:-1:exon
so has part: feature:439037-439180:-1:exon
so has part: feature:438325-438444:-1:exon
so has part: feature:435988-436113:-1:exon
so has part: feature:435295-435417:-1:exon
so has part: feature:434343-434618:-1:exon
so has part: feature:433880-433933:-1:exon
so has part: feature:432296-432421:-1:exon
so has part: feature:431272-431397:-1:exon
so has part: feature:430361-430480:-1:exon
so has part: feature:429478-429615:-1:exon
so has part: feature:429348-429398:-1:exon
so has part: feature:428741-428866:-1:exon
so has part: feature:427819-428046:-1:exon
so has part: feature:427546-427671:-1:exon
so has part: feature:425048-427163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:440693-441175:-1:exon

position:440693:-1
position: 440693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439813-440010:-1:exon

position:439813:-1
position: 439813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440010:-1
position: 440010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:439037-439180:-1:exon

position:439037:-1
position: 439037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439180:-1
position: 439180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:438325-438444:-1:exon

position:438325:-1
position: 438325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438444:-1
position: 438444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:435988-436113:-1:exon

position:435988:-1
position: 435988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436113:-1
position: 436113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:435295-435417:-1:exon

position:435295:-1
position: 435295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435417:-1
position: 435417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:434343-434618:-1:exon

position:434343:-1
position: 434343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434618:-1
position: 434618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:433880-433933:-1:exon

position:433880:-1
position: 433880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433933:-1
position: 433933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:432296-432421:-1:exon

position:432296:-1
position: 432296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432421:-1
position: 432421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:431272-431397:-1:exon

position:431272:-1
position: 431272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431397:-1
position: 431397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:430361-430480:-1:exon

position:430361:-1
position: 430361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430480:-1
position: 430480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:429478-429615:-1:exon

position:429478:-1
position: 429478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429615:-1
position: 429615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:429348-429398:-1:exon

position:429348:-1
position: 429348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429398:-1
position: 429398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:428741-428866:-1:exon

position:428741:-1
position: 428741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428866:-1
position: 428866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:427819-428046:-1:exon

position:427819:-1
position: 427819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428046:-1
position: 428046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:427546-427671:-1:exon

position:427546:-1
position: 427546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427671:-1
position: 427671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:425048-427163:-1:exon

position:427163:-1
position: 427163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100539490
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100539490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrillin-2
translation: MQCCCDSGRCWAIGQTPEMCPVRGSDEYRRLCIEGLPVVPGFPGSFPGIPGFGPNGVGPGLNGPGGIGPNGANGQGGIPGLPGMGPGSSSIGTATLNQTIDICKHFTNLCLNGRCIPTPSSYRCECNMGYKQDVRGECIDVDECSSSPCVHGDCVNTPGSYHCKCHEGFQSTPTKQACIDIDECIMNGVMCRNGRCVNTDGSFQCICNAGFEITPDGKNCVDHDECATTNMCLNGMCINEDGSFKCICKPGFVLAPNGRYCVDIDECETPGICMNGWCINTEGSFRCECLGGLAIGVDGRVCVDTHMRSTCYGGIKKGTCARPFPGAVTKSECCCANPDHGFGEPCQPCPAKNSAEFQALCSSGIGITADGRDINECALNPDICPNGMCENLRGSYRCICNLGYESDPTGKNCVDVDECTINRLLCDNGLCRNTPGSYTCTCPKGFVFRTETDTCEDINECTSNPCVNGVCRNNAGSFACECSPGSKLDSSGTICVDSMKGTCWLNIQDGRCEVNINGATLKSECCATLGAAWGSPCERCEIDTACPRGYARMKGVTCEDVNECDVFPGVCPNGRCVNTAGSFRCECPEGLTLDGTARTCVDVRVEQCYMKWDEDECTEPLPGKYRIDMCCCSVGSAWGIDCEECPKVGSNEYKAICPRGPGFANRGDVLSGRPFYKDVNECKVFSGLCTHGTCRNTIGSFRCICGNGFALDAEERNCTDIDECRISPDLCGHGTCVNTPGSFECECFEGYESGFMMMKNCMGKG
SIO_010081: LOC100539490
subclass of: SO_0000673
so part of: LOC100539490
location: complement(join(427024..427163,427546..427671,427819..428046,428741..428866,429348..429398,429478..429615,430361..430480,431272..431397,432296..432421,433880..433933,434343..434618,435295..435417,435988..436113,438325..438444,439037..439180,439813..440010,440693..440768))
location: region:427024-440768:-1
so has part: feature:440693-440768:-1:exon
so has part: feature:439813-440010:-1:exon
so has part: feature:439037-439180:-1:exon
so has part: feature:438325-438444:-1:exon
so has part: feature:435988-436113:-1:exon
so has part: feature:435295-435417:-1:exon
so has part: feature:434343-434618:-1:exon
so has part: feature:433880-433933:-1:exon
so has part: feature:432296-432421:-1:exon
so has part: feature:431272-431397:-1:exon
so has part: feature:430361-430480:-1:exon
so has part: feature:429478-429615:-1:exon
so has part: feature:429348-429398:-1:exon
so has part: feature:428741-428866:-1:exon
so has part: feature:427819-428046:-1:exon
so has part: feature:427546-427671:-1:exon
so has part: feature:427024-427163:-1:exon

XP_010723050.1
type: Protein
SIO_000068: ncbiprotein

position:427024:-1
position: 427024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440768:-1
position: 440768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440693-440768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:439813-440010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439037-439180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438325-438444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:435988-436113:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:435295-435417:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:434343-434618:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:433880-433933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:432296-432421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431272-431397:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430361-430480:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:429478-429615:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:429348-429398:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:428741-428866:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:427819-428046:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:427546-427671:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:427024-427163:-1:exon

FBN3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FBN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(449943..475082)
location: region:449943-475082:-1
so has part: feature:449943-475082:-1:exon
subclass of: SO_0000010

100538712
type: Gene
SIO_000068: ncbigene

position:449943:-1
position: 449943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475082:-1
position: 475082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:449943-475082:-1:exon

FBN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBN3
product: fibrillin 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_010724750.3
SIO_010081: FBN3
subclass of: SO_0000673
so part of: FBN3
location: complement(join(449943..452154,452751..452919,454045..454276,454476..454595,455130..455258,455487..455603,455952..456074,456861..456986,457248..457454,458266..458391,458950..459081,459348..459470,460017..460136,460357..460482,460758..460823,461277..461429,461805..461930,462318..462437,463058..463186,463434..463550,463792..463917,464504..464629,465072..465197,466257..466328,466668..466817,466988..467113,467440..467565,467797..467865,468370..468531,468790..468912,469622..469744,470339..470464,470827..470949,471654..471776,472217..472342,472486..472611,472898..473020,473361..473486,474406..475082))
location: region:449943-475082:-1
so has part: feature:474406-475082:-1:exon
so has part: feature:473361-473486:-1:exon
so has part: feature:472898-473020:-1:exon
so has part: feature:472486-472611:-1:exon
so has part: feature:472217-472342:-1:exon
so has part: feature:471654-471776:-1:exon
so has part: feature:470827-470949:-1:exon
so has part: feature:470339-470464:-1:exon
so has part: feature:469622-469744:-1:exon
so has part: feature:468790-468912:-1:exon
so has part: feature:468370-468531:-1:exon
so has part: feature:467797-467865:-1:exon
so has part: feature:467440-467565:-1:exon
so has part: feature:466988-467113:-1:exon
so has part: feature:466668-466817:-1:exon
so has part: feature:466257-466328:-1:exon
so has part: feature:465072-465197:-1:exon
so has part: feature:464504-464629:-1:exon
so has part: feature:463792-463917:-1:exon
so has part: feature:463434-463550:-1:exon
so has part: feature:463058-463186:-1:exon
so has part: feature:462318-462437:-1:exon
so has part: feature:461805-461930:-1:exon
so has part: feature:461277-461429:-1:exon
so has part: feature:460758-460823:-1:exon
so has part: feature:460357-460482:-1:exon
so has part: feature:460017-460136:-1:exon
so has part: feature:459348-459470:-1:exon
so has part: feature:458950-459081:-1:exon
so has part: feature:458266-458391:-1:exon
so has part: feature:457248-457454:-1:exon
so has part: feature:456861-456986:-1:exon
so has part: feature:455952-456074:-1:exon
so has part: feature:455487-455603:-1:exon
so has part: feature:455130-455258:-1:exon
so has part: feature:454476-454595:-1:exon
so has part: feature:454045-454276:-1:exon
so has part: feature:452751-452919:-1:exon
so has part: feature:449943-452154:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:474406-475082:-1:exon

position:474406:-1
position: 474406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:473361-473486:-1:exon

position:473361:-1
position: 473361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473486:-1
position: 473486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:472898-473020:-1:exon

position:472898:-1
position: 472898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473020:-1
position: 473020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:472486-472611:-1:exon

position:472486:-1
position: 472486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472611:-1
position: 472611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:472217-472342:-1:exon

position:472217:-1
position: 472217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472342:-1
position: 472342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:471654-471776:-1:exon

position:471654:-1
position: 471654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471776:-1
position: 471776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:470827-470949:-1:exon

position:470827:-1
position: 470827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470949:-1
position: 470949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:470339-470464:-1:exon

position:470339:-1
position: 470339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:470464:-1
position: 470464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:469622-469744:-1:exon

position:469622:-1
position: 469622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469744:-1
position: 469744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:468790-468912:-1:exon

position:468790:-1
position: 468790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468912:-1
position: 468912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:468370-468531:-1:exon

position:468370:-1
position: 468370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:468531:-1
position: 468531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:467797-467865:-1:exon

position:467797:-1
position: 467797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467865:-1
position: 467865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:467440-467565:-1:exon

position:467440:-1
position: 467440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467565:-1
position: 467565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:466988-467113:-1:exon

position:466988:-1
position: 466988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467113:-1
position: 467113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:466668-466817:-1:exon

position:466668:-1
position: 466668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466817:-1
position: 466817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:466257-466328:-1:exon

position:466257:-1
position: 466257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466328:-1
position: 466328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:465072-465197:-1:exon

position:465072:-1
position: 465072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465197:-1
position: 465197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:464504-464629:-1:exon

position:464504:-1
position: 464504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464629:-1
position: 464629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:463792-463917:-1:exon

position:463792:-1
position: 463792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463917:-1
position: 463917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:463434-463550:-1:exon

position:463434:-1
position: 463434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463550:-1
position: 463550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:463058-463186:-1:exon

position:463058:-1
position: 463058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463186:-1
position: 463186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:462318-462437:-1:exon

position:462318:-1
position: 462318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462437:-1
position: 462437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:461805-461930:-1:exon

position:461805:-1
position: 461805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461930:-1
position: 461930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:461277-461429:-1:exon

position:461277:-1
position: 461277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461429:-1
position: 461429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:460758-460823:-1:exon

position:460758:-1
position: 460758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460823:-1
position: 460823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:460357-460482:-1:exon

position:460357:-1
position: 460357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460482:-1
position: 460482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:460017-460136:-1:exon

position:460017:-1
position: 460017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460136:-1
position: 460136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:459348-459470:-1:exon

position:459348:-1
position: 459348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459470:-1
position: 459470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:458950-459081:-1:exon

position:458950:-1
position: 458950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459081:-1
position: 459081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:458266-458391:-1:exon

position:458266:-1
position: 458266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458391:-1
position: 458391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:457248-457454:-1:exon

position:457248:-1
position: 457248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457454:-1
position: 457454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:456861-456986:-1:exon

position:456861:-1
position: 456861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456986:-1
position: 456986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:455952-456074:-1:exon

position:455952:-1
position: 455952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456074:-1
position: 456074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:455487-455603:-1:exon

position:455487:-1
position: 455487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455603:-1
position: 455603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:455130-455258:-1:exon

position:455130:-1
position: 455130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455258:-1
position: 455258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:454476-454595:-1:exon

position:454476:-1
position: 454476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454595:-1
position: 454595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:454045-454276:-1:exon

position:454045:-1
position: 454045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454276:-1
position: 454276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:452751-452919:-1:exon

position:452751:-1
position: 452751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452919:-1
position: 452919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:449943-452154:-1:exon

position:452154:-1
position: 452154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FBN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrillin-3
translation: MAPASPYHLKSPAEGICQPLFMSPSADINECERDPLLCRGGICMNTDGSFECICPPGHELTSEGNTCIDINECSLSDNLCRNGRCVNVIGTYQCACDSGFQATPDRQGCVDIDECTITNGGCDTHCSNSEGSYECSCSEGYALMPDKRSCADIDECEDNPDICDGGQCTNIPGEYRCLCFDGFMASLDMKTCIDVNECDLNPNICLHGECENTKGSFICHCQLGYFVKKGTTGCTDIDECEIGAHNCDMHASCINVPGSFKCKCRTGWLGDGLKCNDLDECATEEHKCNLNANCINTPGSYRCACREGFNGDGFSCSDVDECADNVNLCENGQCLNAPGGYRCECEMGFNPTEDSKACQDIDECTFQNICVFGTCQNLPGMFRCACDDGYELDRSGGNCTDINECADPVNCINGLCVNTPGSYLCNCPQDFELNPTGVGCVDTRVGNCFLDTQDRGDGGISCSAEIGVGVTRASCCCSLGRAWGNPCELCPPANTTEYKTLCPGGEGFRPNPITVILEDIDECQELPGLCQGGNCVNTFGSFQCECPLGYYLNEDTRICEDIDECSAHIGICGPGTCYNTLGNYTCVCPPEYMQVNGGNNCMDMRKSVCYRNYNDTCENELSFNMTKKMCCCSYNIGKAWNKPCEPCPTPASPEYQILCGNQAPGFIIDIHTGKPIDIDECSEIPAICTNGVCINQIGSFRCECPIGFSYNNILLICEDIDECSSGENLCQRNADCINIPGSYRCECSTGYKLSPSGACVGRNECQEIPNVCSHGDCVDTEGSYICICHNGFKATGEQTMCMDIDECDRQPCGNGTCKNTVGSYNCLCFPGFELTHNNDCMDIDECSSMVGQVCRNGQCINSIGSFQCLCQEGYDRTPDGKNCVDINECVSLPGTCSPGTCQNLEGSFRCICPPGYEVQNDNCIDINECEEEPNICLFGTCTNTPGSFQCVCPPGFVLSDNGRRCFDTRQSFCFTRFDNGKCSVPKAFNTTKARCCCSKMPGEGWGDPCELCPQEGNVAFQELCPYGHGAIPGPGDTREDVNECSENLGVCINGACINTDGSFRCECPFGYNLDYTGVNCVDTDECSIGNPCGNGTCTNVVGGFECACDEGFEPGPMMTCEDINECASNPLLCAFRCINTFGSYECTCPSGYALRDDRRMCRDLDECAEGLHDCESRGMLCKNLIGTFMCICPPGMQRRPDGEGCTDENECRTKPGICPNGRCINTVGSYRCDCNEGFEVSPSGTECIDTRQGFCFTEVLQTMCQMSSTNRNLVTKSECCCNSGRSWGPQCELCPLLGTAQYKKMCPHGPGYSTDGRDIDECKVLPNLCKNGQCINSIGSFRCHCRLGYTADITGTACVDLDECNQSPKPCNFICKNTDGSYQCSCPRGYVLQEDGKICKDLDECSTKQHNCQFLCVNVIGGFNCKCPPGFTQHHSSCIDNNECTAQPSLCGAKGQCLNTPGSYNCECQKGFSLDSSGVNCEDVDECDGNHRCQHGCQNVLGGYRCGCPQGYVQHYQWNQCVDENECSSPTACGSASCYNTLGSFKCVCPSGFDFDQAFGGCQDVDECSAGGSPCSYGCSNTDGGYLCGCPGGYFRAGQGHCISGLGFGKGSYLPAPQEEDEDNLLSPETCYECKINGYPKRGRQRRSVNGTERHKDHTVNLASMDVETPLSMMLNLSDLAHNEHILELLPAVEPLENRVRYLISHGNEDGYFRIHQKEGLSFLHLGRKKIVPGTYLLEIMSVPLYRKRELQKLEAKNDLNYLAGELGQALRMKLQLQLY
SIO_010081: FBN3
subclass of: SO_0000673
so part of: FBN3
location: complement(join(451780..452154,452751..452919,454045..454276,454476..454595,455130..455258,455487..455603,455952..456074,456861..456986,457248..457454,458266..458391,458950..459081,459348..459470,460017..460136,460357..460482,460758..460823,461277..461429,461805..461930,462318..462437,463058..463186,463434..463550,463792..463917,464504..464629,465072..465197,466257..466328,466668..466817,466988..467113,467440..467565,467797..467865,468370..468531,468790..468912,469622..469744,470339..470464,470827..470949,471654..471776,472217..472342,472486..472611,472898..473020,473361..473486,474406..474610))
location: region:451780-474610:-1
so has part: feature:474406-474610:-1:exon
so has part: feature:473361-473486:-1:exon
so has part: feature:472898-473020:-1:exon
so has part: feature:472486-472611:-1:exon
so has part: feature:472217-472342:-1:exon
so has part: feature:471654-471776:-1:exon
so has part: feature:470827-470949:-1:exon
so has part: feature:470339-470464:-1:exon
so has part: feature:469622-469744:-1:exon
so has part: feature:468790-468912:-1:exon
so has part: feature:468370-468531:-1:exon
so has part: feature:467797-467865:-1:exon
so has part: feature:467440-467565:-1:exon
so has part: feature:466988-467113:-1:exon
so has part: feature:466668-466817:-1:exon
so has part: feature:466257-466328:-1:exon
so has part: feature:465072-465197:-1:exon
so has part: feature:464504-464629:-1:exon
so has part: feature:463792-463917:-1:exon
so has part: feature:463434-463550:-1:exon
so has part: feature:463058-463186:-1:exon
so has part: feature:462318-462437:-1:exon
so has part: feature:461805-461930:-1:exon
so has part: feature:461277-461429:-1:exon
so has part: feature:460758-460823:-1:exon
so has part: feature:460357-460482:-1:exon
so has part: feature:460017-460136:-1:exon
so has part: feature:459348-459470:-1:exon
so has part: feature:458950-459081:-1:exon
so has part: feature:458266-458391:-1:exon
so has part: feature:457248-457454:-1:exon
so has part: feature:456861-456986:-1:exon
so has part: feature:455952-456074:-1:exon
so has part: feature:455487-455603:-1:exon
so has part: feature:455130-455258:-1:exon
so has part: feature:454476-454595:-1:exon
so has part: feature:454045-454276:-1:exon
so has part: feature:452751-452919:-1:exon
so has part: feature:451780-452154:-1:exon

XP_010723052.1
type: Protein
SIO_000068: ncbiprotein

position:451780:-1
position: 451780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474610:-1
position: 474610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474406-474610:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:473361-473486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472898-473020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472486-472611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472217-472342:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471654-471776:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:470827-470949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470339-470464:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:469622-469744:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468790-468912:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468370-468531:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:467797-467865:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:467440-467565:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:466988-467113:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:466668-466817:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:466257-466328:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:465072-465197:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:464504-464629:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:463792-463917:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:463434-463550:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:463058-463186:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:462318-462437:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:461805-461930:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:461277-461429:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:460758-460823:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:460357-460482:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:460017-460136:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:459348-459470:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:458950-459081:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:458266-458391:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:457248-457454:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:456861-456986:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:455952-456074:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:455487-455603:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:455130-455258:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:454476-454595:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:454045-454276:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:452751-452919:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:451780-452154:-1:exon

CTXN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CTXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 485808..495816
location: region:485808-495816:1
so has part: feature:485808-495816:1:exon
subclass of: SO_0000010

104914638
type: Gene
SIO_000068: ncbigene

position:485808:1
position: 485808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495816:1
position: 495816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485808-495816:1:exon

CTXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CTXN1
product: cortexin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010724751.3
SIO_010081: CTXN1
subclass of: SO_0000673
so part of: CTXN1
location: join(485808..486005,486578..486700,491044..491154,492093..492273)
location: region:485808-492273:1
so has part: feature:485808-486005:1:exon
so has part: feature:486578-486700:1:exon
so has part: feature:491044-491154:1:exon
so has part: feature:492093-492273:1:exon

position:492273:1
position: 492273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485808-486005:1:exon

position:486005:1
position: 486005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486578-486700:1:exon

position:486578:1
position: 486578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486700:1
position: 486700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:491044-491154:1:exon

position:491044:1
position: 491044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491154:1
position: 491154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:492093-492273:1:exon

position:492093:1
position: 492093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CTXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cortexin-1 isoform X1
translation: MQALPRILLCSEVPIAVPEVCPAGLWRRRACGPGSTAVGQRRERQSPAVPQVKPFRLSLELRANKVPPWLLDCIHDTVQLNPASLIIVLIFQFHSWNRSALQPKKAGSWRSLLSDVAVGRQSSAFPATAMLVHPHSWSELLVCTGENPELLGSA
SIO_010081: CTXN1
subclass of: SO_0000673
so part of: CTXN1
location: join(485823..486005,486578..486700,491044..491154,492093..492140)
location: region:485823-492140:1
so has part: feature:485823-486005:1:exon
so has part: feature:486578-486700:1:exon
so has part: feature:491044-491154:1:exon
so has part: feature:492093-492140:1:exon

XP_010723053.1
type: Protein
SIO_000068: ncbiprotein

position:485823:1
position: 485823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492140:1
position: 492140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485823-486005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:486578-486700:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:491044-491154:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:492093-492140:1:exon

CTXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CTXN1
product: cortexin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_010724753.3
SIO_010081: CTXN1
subclass of: SO_0000673
so part of: CTXN1
location: join(485873..486005,491044..491154,492093..495816)
location: region:485873-495816:1
so has part: feature:485873-486005:1:exon
so has part: feature:491044-491154:1:exon
so has part: feature:492093-495816:1:exon

position:485873:1
position: 485873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:485873-486005:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:491044-491154:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:492093-495816:1:exon

CTXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CTXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cortexin-1 isoform X2
translation: MNDASTMDYELLSPSLVEHPASTAGMDAEQKTVFAFVIFLLVFLVMLMVRCFRILLDPYSRMPASSWTDHKEGLERGQFDYALV
SIO_010081: CTXN1
subclass of: SO_0000673
so part of: CTXN1
location: 492273..492527
location: region:492273-492527:1
so has part: feature:492273-492527:1:exon

XP_010723055.1
type: Protein
SIO_000068: ncbiprotein

position:492527:1
position: 492527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492273-492527:1:exon

LOC104914639
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914639
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(504196..505699)
location: region:504196-505699:-1
so has part: feature:504196-505699:-1:exon

104914639
type: Gene
SIO_000068: ncbigene

position:504196:-1
position: 504196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505699:-1
position: 505699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504196-505699:-1:exon

LOC104914639
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104914639
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104914639
subclass of: SO_0000673
so part of: LOC104914639
location: complement(504196..504237)
location: region:504196-504237:-1
so has part: feature:504196-504237:-1:exon

position:504237:-1
position: 504237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504196-504237:-1:exon

LOC104914639
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104914639
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104914639
subclass of: SO_0000673
so part of: LOC104914639
location: complement(505070..505699)
location: region:505070-505699:-1
so has part: feature:505070-505699:-1:exon

position:505070:-1
position: 505070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505070-505699:-1:exon

LMNB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LMNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(534724..558617)
location: region:534724-558617:-1
so has part: feature:534724-558617:-1:exon
subclass of: SO_0000010

100551283
type: Gene
SIO_000068: ncbigene

position:534724:-1
position: 534724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:558617:-1
position: 558617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:534724-558617:-1:exon

LMNB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LMNB2
product: lamin B2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 22 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724755.2
SIO_010081: LMNB2
subclass of: SO_0000673
so part of: LMNB2
location: complement(join(534724..539677,540883..540984,541836..541955,542748..542855,543306..543597,544165..544385,546157..546282,548237..548407,550127..550252,550869..551025,553349..553485,558483..558617))
location: region:534724-558617:-1
so has part: feature:558483-558617:-1:exon
so has part: feature:553349-553485:-1:exon
so has part: feature:550869-551025:-1:exon
so has part: feature:550127-550252:-1:exon
so has part: feature:548237-548407:-1:exon
so has part: feature:546157-546282:-1:exon
so has part: feature:544165-544385:-1:exon
so has part: feature:543306-543597:-1:exon
so has part: feature:542748-542855:-1:exon
so has part: feature:541836-541955:-1:exon
so has part: feature:540883-540984:-1:exon
so has part: feature:534724-539677:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558483-558617:-1:exon

position:558483:-1
position: 558483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553349-553485:-1:exon

position:553349:-1
position: 553349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553485:-1
position: 553485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:550869-551025:-1:exon

position:550869:-1
position: 550869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551025:-1
position: 551025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:550127-550252:-1:exon

position:550127:-1
position: 550127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550252:-1
position: 550252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:548237-548407:-1:exon

position:548237:-1
position: 548237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548407:-1
position: 548407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:546157-546282:-1:exon

position:546157:-1
position: 546157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546282:-1
position: 546282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:544165-544385:-1:exon

position:544165:-1
position: 544165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544385:-1
position: 544385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:543306-543597:-1:exon

position:543306:-1
position: 543306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543597:-1
position: 543597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:542748-542855:-1:exon

position:542748:-1
position: 542748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542855:-1
position: 542855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:541836-541955:-1:exon

position:541836:-1
position: 541836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541955:-1
position: 541955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:540883-540984:-1:exon

position:540883:-1
position: 540883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540984:-1
position: 540984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:534724-539677:-1:exon

position:539677:-1
position: 539677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMNB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LMNB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lamin-B2
translation: MKWESSHDECCNGHLIKPHPQVVERLVGFIVRLLQMIFEASRLMAVSGIKNLYESELADARRVLDETAKERARLQIEIGKLRAELEEFNKSYKKKDADLSVAQGRIKDLEVLFHRSEAELNTVLNEKRNLEAEVADLRAQLAKAEDGHAVAKKQLEKETLMRVDLENRCQSLQEDLDFRKNVFEEEIRETRKRHEHRLVEVDTSRQQEYENKMAQALEDLRNQHDEQVKLYKMELEQTYQAKLENAILASDQNDKAAGAAREELKEARMRIESLSYQLSGLQKQASAAEDRIRELEETMAGERDKFRKMLDAKEREMTEMRDQMQLQLTEYQELLDVKLALDMEISAYRKLLEGEEERLKLSPSPSSRVTVSRATSSSSSSSTSLVRSSRGKRRRIEAEELSGSGTSGIGTGSISGSSSSSSFQMSQQASATGSISIEEIDLEGKYVQLKNNSEKDQSLGNWRLKRQIGDGEEIAYKFTPKYVLRAGQTVTIWGADAGVSHSPPSVLVWKNQGSWGTGGNIRTYLVNSDGEEVAVRTVTKSVVMRENEEEEDEADFGEEDLFNQQGDPRTTSRGCSVM
SIO_010081: LMNB2
subclass of: SO_0000673
so part of: LMNB2
location: complement(join(539636..539677,540883..540984,541836..541955,542748..542855,543306..543597,544165..544385,546157..546282,548237..548407,550127..550252,550869..551025,553349..553485,558483..558617))
location: region:539636-558617:-1
so has part: feature:558483-558617:-1:exon
so has part: feature:553349-553485:-1:exon
so has part: feature:550869-551025:-1:exon
so has part: feature:550127-550252:-1:exon
so has part: feature:548237-548407:-1:exon
so has part: feature:546157-546282:-1:exon
so has part: feature:544165-544385:-1:exon
so has part: feature:543306-543597:-1:exon
so has part: feature:542748-542855:-1:exon
so has part: feature:541836-541955:-1:exon
so has part: feature:540883-540984:-1:exon
so has part: feature:539636-539677:-1:exon

XP_010723057.2
type: Protein
SIO_000068: ncbiprotein

position:539636:-1
position: 539636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558483-558617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553349-553485:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550869-551025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550127-550252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548237-548407:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546157-546282:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:544165-544385:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543306-543597:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542748-542855:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:541836-541955:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:540883-540984:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:539636-539677:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 563909..564008
location: region:563909-564008:1
so has part: feature:563909-564008:1:region

position:563909:1
position: 563909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564008:1
position: 564008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:563909-564008:1:region

LOC104914640
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 569066..572995
location: region:569066-572995:1
so has part: feature:569066-572995:1:exon
subclass of: SO_0000011

104914640
type: Gene
SIO_000068: ncbigene

position:569066:1
position: 569066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572995:1
position: 572995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:569066-572995:1:exon

LOC104914640
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104914640
product: uncharacterized LOC104914640, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_796086.2
SIO_010081: LOC104914640
subclass of: SO_0000673
so part of: LOC104914640
location: join(569066..570851,571377..571613,571918..572995)
location: region:569066-572995:1
so has part: feature:569066-570851:1:exon
so has part: feature:571377-571613:1:exon
so has part: feature:571918-572995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569066-570851:1:exon

position:570851:1
position: 570851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:571377-571613:1:exon

position:571377:1
position: 571377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571613:1
position: 571613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:571918-572995:1:exon

position:571918:1
position: 571918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104914640
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104914640
product: uncharacterized LOC104914640, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002109505.1
SIO_010081: LOC104914640
subclass of: SO_0000673
so part of: LOC104914640
location: join(569066..570851,571377..571613,571918..572041,572854..572995)
location: region:569066-572995:1
so has part: feature:569066-570851:1:exon
so has part: feature:571377-571613:1:exon
so has part: feature:571918-572041:1:exon
so has part: feature:572854-572995:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:569066-570851:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571377-571613:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:571918-572041:1:exon

position:572041:1
position: 572041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:572854-572995:1:exon

position:572854:1
position: 572854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC1A6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC1A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(592064..621364)
location: region:592064-621364:-1
so has part: feature:592064-621364:-1:exon
subclass of: SO_0000010

100539633
type: Gene
SIO_000068: ncbigene

position:592064:-1
position: 592064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621364:-1
position: 621364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592064-621364:-1:exon

SLC1A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC1A6
product: solute carrier family 1 member 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010724759.3
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(592064..593712,594353..594389,596254..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607536,612923..613078,621013..621360))
location: region:592064-621360:-1
so has part: feature:621013-621360:-1:exon
so has part: feature:612923-613078:-1:exon
so has part: feature:607289-607536:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:596254-596357:-1:exon
so has part: feature:594353-594389:-1:exon
so has part: feature:592064-593712:-1:exon

position:621360:-1
position: 621360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621013-621360:-1:exon

position:621013:-1
position: 621013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:612923-613078:-1:exon

position:612923:-1
position: 612923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613078:-1
position: 613078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:607289-607536:-1:exon

position:607289:-1
position: 607289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607536:-1
position: 607536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:606731-606868:-1:exon

position:606731:-1
position: 606731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606868:-1
position: 606868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:605647-605851:-1:exon

position:605647:-1
position: 605647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605851:-1
position: 605851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:603498-603540:-1:exon

position:603498:-1
position: 603498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603540:-1
position: 603540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:602235-602575:-1:exon

position:602235:-1
position: 602235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602575:-1
position: 602575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:599823-600056:-1:exon

position:599823:-1
position: 599823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600056:-1
position: 600056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:598734-598928:-1:exon

position:598734:-1
position: 598734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598928:-1
position: 598928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:598164-598298:-1:exon

position:598164:-1
position: 598164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:598298:-1
position: 598298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:596254-596357:-1:exon

position:596254:-1
position: 596254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596357:-1
position: 596357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:594353-594389:-1:exon

position:594353:-1
position: 594353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594389:-1
position: 594389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:592064-593712:-1:exon

position:593712:-1
position: 593712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC1A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC1A6
product: solute carrier family 1 member 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_010724758.3
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(593596..593712,596254..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607536,612923..613078,621013..621359))
location: region:593596-621359:-1
so has part: feature:621013-621359:-1:exon
so has part: feature:612923-613078:-1:exon
so has part: feature:607289-607536:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:596254-596357:-1:exon
so has part: feature:593596-593712:-1:exon

position:593596:-1
position: 593596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621359:-1
position: 621359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621013-621359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612923-613078:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607289-607536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:596254-596357:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:593596-593712:-1:exon

SLC1A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC1A6
product: solute carrier family 1 member 6, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_019609979.2
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(593596..593712,596254..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607536,608697..608823))
location: region:593596-608823:-1
so has part: feature:608697-608823:-1:exon
so has part: feature:607289-607536:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:596254-596357:-1:exon
so has part: feature:593596-593712:-1:exon

position:608823:-1
position: 608823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608697-608823:-1:exon

position:608697:-1
position: 608697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:607289-607536:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:596254-596357:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:593596-593712:-1:exon

SLC1A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC1A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: excitatory amino acid transporter 4 isoform X2
translation: MSEQSHVNSLFLNEDAAKRLHAEGRVQRLRQAVQKRAARAKKRMSSITADSAKSFFRRNAFVLFTIAAVLLGIILAFSLRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLITGMASLDGRASGKMGMRAVVYYMVTTIIAVFIGILMVIIIHPGKGSKDKLHREGRIEQVQTTDAFMDLVRNMFPPNLVEACFKQYKTQYSTRVFTRTVLHSSNLTASMATTQLPAPENSTGILENVTHALGTISEVLTFEEVIPIPGSANGVNALGLVVFSMCFGLVIGSMKQKGRALREFFNCLNEAIMRLVAIIIWYAPVGIMFLIAGKILEMDDLAVMGGQLGMYTLTVIVGLLIHALCILPLLYFIVTHRNPWVFIAGLLQALITALGTSSSSATLPITFRCLEENNGVDRRITRFVLPVGATINMDGTALYEALAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRQELDAQECELDYLSNFSRKH
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(593681..593712,596254..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607502))
location: region:593681-607502:-1
so has part: feature:607289-607502:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:596254-596357:-1:exon
so has part: feature:593681-593712:-1:exon

XP_019465524.1
type: Protein
SIO_000068: ncbiprotein

position:593681:-1
position: 593681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607502:-1
position: 607502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607289-607502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596254-596357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:593681-593712:-1:exon

SLC1A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC1A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: excitatory amino acid transporter 4 isoform X2
translation: MSEQSHVNSLFLNEDAAKRLHAEGRVQRLRQAVQKRAARAKKRMSSITADSAKSFFRRNAFVLFTIAAVLLGIILAFSLRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLITGMASLDGRASGKMGMRAVVYYMVTTIIAVFIGILMVIIIHPGKGSKDKLHREGRIEQVQTTDAFMDLVRNMFPPNLVEACFKQYKTQYSTRVFTRTVLHSSNLTASMATTQLPAPENSTGILENVTHALGTISEVLTFEEVIPIPGSANGVNALGLVVFSMCFGLVIGSMKQKGRALREFFNCLNEAIMRLVAIIIWYAPVGIMFLIAGKILEMDDLAVMGGQLGMYTLTVIVGLLIHALCILPLLYFIVTHRNPWVFIAGLLQALITALGTSSSSATLPITFRCLEENNGVDRRITRFVLPVGATINMDGTALYEALAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRQELDAQECELDYLSNFSRKH
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(593681..593712,596254..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607502))
location: region:593681-607502:-1
so has part: feature:607289-607502:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:596254-596357:-1:exon
so has part: feature:593681-593712:-1:exon

XP_010723060.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:607289-607502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596254-596357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:593681-593712:-1:exon

SLC1A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC1A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: excitatory amino acid transporter 4 isoform X3
translation: MSEQSHVNSLFLNEDAAKRLHAEGRVQRLRQAVQKRAARAKKRMSSITADSAKSFFRRNAFVLFTIAAVLLGIILAFSLRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLITGMASLDGRASGKMGMRAVVYYMVTTIIAVFIGILMVIIIHPGKGSKDKLHREGRIEQVQTTDAFMDLVRNMFPPNLVEACFKQYKTQYSTRVFTRTVLHSSNLTASMATTQLPAPENSTGILENVTHALGTISEVLTFEEVIPIPGSANGVNALGLVVFSMCFGLVIGSMKQKGRALREFFNCLNEAIMRLVAIIIWYAPVGIMFLIAGKILEMDDLAVMGGQLGMYTLTVIVGLLIHALCILPLLYFIVTHRNPWVFIAGLLQALITALGTSSSSATLPITFRCLEENNGVDRRITRFVLPVGATINMDGTALYEALAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRQELDAQECELD
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(594385..594389,596254..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607502))
location: region:594385-607502:-1
so has part: feature:607289-607502:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:596254-596357:-1:exon
so has part: feature:594385-594389:-1:exon

XP_010723061.1
type: Protein
SIO_000068: ncbiprotein

position:594385:-1
position: 594385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607289-607502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596254-596357:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:594385-594389:-1:exon

SLC1A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC1A6
product: solute carrier family 1 member 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019609978.2
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(595816..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607536,608697..608976,612923..613078,621013..621364))
location: region:595816-621364:-1
so has part: feature:621013-621364:-1:exon
so has part: feature:612923-613078:-1:exon
so has part: feature:608697-608976:-1:exon
so has part: feature:607289-607536:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:595816-596357:-1:exon

position:595816:-1
position: 595816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621013-621364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612923-613078:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:608697-608976:-1:exon

position:608976:-1
position: 608976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:607289-607536:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:595816-596357:-1:exon

SLC1A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC1A6
product: solute carrier family 1 member 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010724756.3
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(595816..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607536,612923..613078,621013..621363))
location: region:595816-621363:-1
so has part: feature:621013-621363:-1:exon
so has part: feature:612923-613078:-1:exon
so has part: feature:607289-607536:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:595816-596357:-1:exon

position:621363:-1
position: 621363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621013-621363:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:612923-613078:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607289-607536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:595816-596357:-1:exon

SLC1A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC1A6
product: solute carrier family 1 member 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_010724757.3
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(595816..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607536,612923..613078,619822..619951))
location: region:595816-619951:-1
so has part: feature:619822-619951:-1:exon
so has part: feature:612923-613078:-1:exon
so has part: feature:607289-607536:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:595816-596357:-1:exon

position:619951:-1
position: 619951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619822-619951:-1:exon

position:619822:-1
position: 619822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:612923-613078:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607289-607536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:595816-596357:-1:exon

SLC1A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC1A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: excitatory amino acid transporter 4 isoform X1
translation: MSEQSHVNSLFLNEDAAKRLHAEGRVQRLRQAVQKRAARAKKRMSSITADSAKSFFRRNAFVLFTIAAVLLGIILAFSLRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLITGMASLDGRASGKMGMRAVVYYMVTTIIAVFIGILMVIIIHPGKGSKDKLHREGRIEQVQTTDAFMDLVRNMFPPNLVEACFKQYKTQYSTRVFTRTVLHSSNLTASMATTQLPAPENSTGILENVTHALGTISEVLTFEEVIPIPGSANGVNALGLVVFSMCFGLVIGSMKQKGRALREFFNCLNEAIMRLVAIIIWYAPVGIMFLIAGKILEMDDLAVMGGQLGMYTLTVIVGLLIHALCILPLLYFIVTHRNPWVFIAGLLQALITALGTSSSSATLPITFRCLEENNGVDRRITRFVLPVGATINMDGTALYEALAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRQELDAQECELGNSGIEEKEQPCQRVCTHNDSLRHPSRETAL
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(596159..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607502))
location: region:596159-607502:-1
so has part: feature:607289-607502:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:596159-596357:-1:exon

XP_019465523.1
type: Protein
SIO_000068: ncbiprotein

position:596159:-1
position: 596159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607289-607502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596159-596357:-1:exon

SLC1A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC1A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: excitatory amino acid transporter 4 isoform X1
translation: MSEQSHVNSLFLNEDAAKRLHAEGRVQRLRQAVQKRAARAKKRMSSITADSAKSFFRRNAFVLFTIAAVLLGIILAFSLRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLITGMASLDGRASGKMGMRAVVYYMVTTIIAVFIGILMVIIIHPGKGSKDKLHREGRIEQVQTTDAFMDLVRNMFPPNLVEACFKQYKTQYSTRVFTRTVLHSSNLTASMATTQLPAPENSTGILENVTHALGTISEVLTFEEVIPIPGSANGVNALGLVVFSMCFGLVIGSMKQKGRALREFFNCLNEAIMRLVAIIIWYAPVGIMFLIAGKILEMDDLAVMGGQLGMYTLTVIVGLLIHALCILPLLYFIVTHRNPWVFIAGLLQALITALGTSSSSATLPITFRCLEENNGVDRRITRFVLPVGATINMDGTALYEALAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRQELDAQECELGNSGIEEKEQPCQRVCTHNDSLRHPSRETAL
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(596159..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607502))
location: region:596159-607502:-1
so has part: feature:607289-607502:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:596159-596357:-1:exon

XP_010723058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:607289-607502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596159-596357:-1:exon

SLC1A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC1A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: excitatory amino acid transporter 4 isoform X1
translation: MSEQSHVNSLFLNEDAAKRLHAEGRVQRLRQAVQKRAARAKKRMSSITADSAKSFFRRNAFVLFTIAAVLLGIILAFSLRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLITGMASLDGRASGKMGMRAVVYYMVTTIIAVFIGILMVIIIHPGKGSKDKLHREGRIEQVQTTDAFMDLVRNMFPPNLVEACFKQYKTQYSTRVFTRTVLHSSNLTASMATTQLPAPENSTGILENVTHALGTISEVLTFEEVIPIPGSANGVNALGLVVFSMCFGLVIGSMKQKGRALREFFNCLNEAIMRLVAIIIWYAPVGIMFLIAGKILEMDDLAVMGGQLGMYTLTVIVGLLIHALCILPLLYFIVTHRNPWVFIAGLLQALITALGTSSSSATLPITFRCLEENNGVDRRITRFVLPVGATINMDGTALYEALAAIFIAQVNNYELDFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRQELDAQECELGNSGIEEKEQPCQRVCTHNDSLRHPSRETAL
SIO_010081: SLC1A6
subclass of: SO_0000673
so part of: SLC1A6
location: complement(join(596159..596357,598164..598298,598734..598928,599823..600056,602235..602575,603498..603540,605647..605851,606731..606868,607289..607502))
location: region:596159-607502:-1
so has part: feature:607289-607502:-1:exon
so has part: feature:606731-606868:-1:exon
so has part: feature:605647-605851:-1:exon
so has part: feature:603498-603540:-1:exon
so has part: feature:602235-602575:-1:exon
so has part: feature:599823-600056:-1:exon
so has part: feature:598734-598928:-1:exon
so has part: feature:598164-598298:-1:exon
so has part: feature:596159-596357:-1:exon

XP_010723059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:607289-607502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:606731-606868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605647-605851:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:603498-603540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602235-602575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:599823-600056:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:598734-598928:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:598164-598298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:596159-596357:-1:exon

RANBP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RANBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 633640..674552
location: region:633640-674552:1
so has part: feature:633640-674552:1:exon
subclass of: SO_0000010

100539481
type: Gene
SIO_000068: ncbigene

position:633640:1
position: 633640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674552:1
position: 674552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633640-674552:1:exon

RANBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RANBP3
product: RAN binding protein 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031557104.1
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(633640..633679,642653..642708,645638..645718,653927..653963,654043..654129,659746..659817,660967..661032,662398..662490,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670058..670182,670787..670907,671526..671668,672143..672323,672917..674552)
location: region:633640-674552:1
so has part: feature:633640-633679:1:exon
so has part: feature:642653-642708:1:exon
so has part: feature:645638-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:659746-659817:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:662398-662490:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670058-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-674552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633640-633679:1:exon

position:633679:1
position: 633679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:642653-642708:1:exon

position:642653:1
position: 642653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642708:1
position: 642708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:645638-645718:1:exon

position:645638:1
position: 645638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645718:1
position: 645718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:653927-653963:1:exon

position:653927:1
position: 653927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653963:1
position: 653963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:654043-654129:1:exon

position:654043:1
position: 654043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654129:1
position: 654129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:659746-659817:1:exon

position:659746:1
position: 659746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659817:1
position: 659817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:660967-661032:1:exon

position:660967:1
position: 660967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661032:1
position: 661032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:662398-662490:1:exon

position:662398:1
position: 662398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662490:1
position: 662490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:663629-663732:1:exon

position:663629:1
position: 663629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663732:1
position: 663732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:665739-665858:1:exon

position:665739:1
position: 665739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665858:1
position: 665858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:666449-666552:1:exon

position:666449:1
position: 666449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666552:1
position: 666552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:668505-668583:1:exon

position:668505:1
position: 668505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668583:1
position: 668583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:669410-669512:1:exon

position:669410:1
position: 669410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669512:1
position: 669512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:670058-670182:1:exon

position:670058:1
position: 670058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670182:1
position: 670182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:670787-670907:1:exon

position:670787:1
position: 670787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670907:1
position: 670907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:671526-671668:1:exon

position:671526:1
position: 671526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671668:1
position: 671668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:672143-672323:1:exon

position:672143:1
position: 672143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672323:1
position: 672323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:672917-674552:1:exon

position:672917:1
position: 672917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RANBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RANBP3
product: RAN binding protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_031557100.1
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(642658..642708,645638..645718,653927..653963,654043..654129,660967..661032,662398..662490,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670058..670182,670787..670907,671526..671668,672143..672323,672917..674552)
location: region:642658-674552:1
so has part: feature:642658-642708:1:exon
so has part: feature:645638-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:662398-662490:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670058-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-674552:1:exon

position:642658:1
position: 642658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642658-642708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645638-645718:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662398-662490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670058-670182:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672917-674552:1:exon

RANBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RANBP3
product: RAN binding protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_031557101.1
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(642658..642708,645638..645718,653927..653963,654043..654129,660967..661032,662398..662490,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670073..670182,670787..670907,671526..671668,672143..672323,672917..674552)
location: region:642658-674552:1
so has part: feature:642658-642708:1:exon
so has part: feature:645638-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:662398-662490:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670073-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-674552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:642658-642708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:645638-645718:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662398-662490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670073-670182:1:exon

position:670073:1
position: 670073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672917-674552:1:exon

RANBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RANBP3
product: RAN binding protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_031557099.1
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(645647..645718,653927..653963,654043..654129,659746..659817,660967..661032,662398..662490,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670073..670182,670787..670907,671526..671668,672143..672323,672917..674552)
location: region:645647-674552:1
so has part: feature:645647-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:659746-659817:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:662398-662490:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670073-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-674552:1:exon

position:645647:1
position: 645647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645647-645718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659746-659817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662398-662490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670073-670182:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672917-674552:1:exon

RANBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RANBP3
product: RAN binding protein 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_031557102.1
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(645647..645718,653927..653963,654043..654129,659746..659817,660967..661032,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670058..670182,670787..670907,671526..671668,672143..672323,672917..674552)
location: region:645647-674552:1
so has part: feature:645647-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:659746-659817:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670058-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-674552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:645647-645718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659746-659817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670058-670182:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672917-674552:1:exon

RANBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RANBP3
product: RAN binding protein 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_031557103.1
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(645647..645718,653927..653963,654043..654129,660967..661032,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670058..670182,670787..670907,671526..671668,672143..672323,672917..674552)
location: region:645647-674552:1
so has part: feature:645647-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670058-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-674552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:645647-645718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670058-670182:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:672917-674552:1:exon

RANBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RANBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 3 isoform X7
translation: MALRSDSGCSEELVQAADQRSADGSSPEDGDESDREDGNYCPPVKRERTSSLTQFPPSQSVTKNNVFMPSSFCEPSAGNSDSEPEEKSSGFRLKPPILIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQPKAFSQMVLSSGTNGVNIPPDSAATSESLSNATLKSSDTEDKAGECQKKESNSTSDDDSGDKAELNAQQAFVFGQNLRDRVKLGDDSDETADVQNAGLPTSDTPSATNYFLQYISSSIENSTNSADASSNKFVFGQNMSERVLSPPKSNEGSTESNKENAATESGSESSSQEATPEKANNISESLAESAAAYTKATARKCLLAKVEVITGEEAESNVLQIQCKLFVFDKNSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEVKNVAPEPEVTQSNEEDSDDDVLAPSGSVGSGPSDERDGQNASST
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(645662..645718,653927..653963,654043..654129,659746..659817,660967..661032,662398..662490,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670058..670182,670787..670907,671526..671668,672143..672323,672917..672960)
location: region:645662-672960:1
so has part: feature:645662-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:659746-659817:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:662398-662490:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670058-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-672960:1:exon

XP_031412964.1
type: Protein
SIO_000068: ncbiprotein

position:645662:1
position: 645662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672960:1
position: 672960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645662-645718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659746-659817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662398-662490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670058-670182:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672917-672960:1:exon

RANBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RANBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 3 isoform X1
translation: MALRSDSGCSEELVQAADQRSADGSSPEDGDESDREDGNYCPPVKRERTSSLTQFPPSQSVTKNNVFMPSSFCEPSAGNSDSEPEEKSSGFRLKPPILIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQPKAFSQMVLSSGTNGVNIPPDSAATSESLSNATLKSSDTEDKAGECQKKESNSTSDDDSGDKAELNAQQAFVFGQNLRDRVKLGDDSDETADVQNAGLPTSDTPSATNYFLQYISSSIENSTNSADASSNKFVFGQNMSERVLSPPKSNEGSTESNKENAATESGSESSSQEATPEKESLAESAAAYTKATARKCLLAKVEVITGEEAESNVLQIQCKLFVFDKNSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEVKNVAPEPEVTQSNEEDSDDDVLAPSGSVGSGPSDERDGQNASST
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(645662..645718,653927..653963,654043..654129,659746..659817,660967..661032,662398..662490,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670073..670182,670787..670907,671526..671668,672143..672323,672917..672960)
location: region:645662-672960:1
so has part: feature:645662-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:659746-659817:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:662398-662490:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670073-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-672960:1:exon

XP_031412959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645662-645718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659746-659817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662398-662490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670073-670182:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672917-672960:1:exon

RANBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RANBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 3 isoform X5
translation: MALRSDSGCSEELVQAADQRSADGSSPEDGDESDREDGNYCPPVKRERTSSLTQFPPSQSVTKNNVFMPSSFCEPSAGNSDSEPEEKSSGFRLKPPILIHGQAPSAVLSSGTNGVNIPPDSAATSESLSNATLKSSDTEDKAGECQKKESNSTSDDDSGDKAELNAQQAFVFGQNLRDRVKLGDDSDETADVQNAGLPTSDTPSATNYFLQYISSSIENSTNSADASSNKFVFGQNMSERVLSPPKSNEGSTESNKENAATESGSESSSQEATPEKANNISESLAESAAAYTKATARKCLLAKVEVITGEEAESNVLQIQCKLFVFDKNSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEVKNVAPEPEVTQSNEEDSDDDVLAPSGSVGSGPSDERDGQNASST
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(645662..645718,653927..653963,654043..654129,659746..659817,660967..661032,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670058..670182,670787..670907,671526..671668,672143..672323,672917..672960)
location: region:645662-672960:1
so has part: feature:645662-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:659746-659817:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670058-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-672960:1:exon

XP_031412962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645662-645718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659746-659817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670058-670182:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672917-672960:1:exon

RANBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RANBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 3 isoform X3
translation: MALRSDSGCSEELVQAADQRSADGSSPEDGDESDREDGNYCPPVKRERTSSLTQFPPSQSEEKSSGFRLKPPILIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQPKAFSQMVLSSGTNGVNIPPDSAATSESLSNATLKSSDTEDKAGECQKKESNSTSDDDSGDKAELNAQQAFVFGQNLRDRVKLGDDSDETADVQNAGLPTSDTPSATNYFLQYISSSIENSTNSADASSNKFVFGQNMSERVLSPPKSNEGSTESNKENAATESGSESSSQEATPEKANNISESLAESAAAYTKATARKCLLAKVEVITGEEAESNVLQIQCKLFVFDKNSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEVKNVAPEPEVTQSNEEDSDDDVLAPSGSVGSGPSDERDGQNASST
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(645662..645718,653927..653963,654043..654129,660967..661032,662398..662490,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670058..670182,670787..670907,671526..671668,672143..672323,672917..672960)
location: region:645662-672960:1
so has part: feature:645662-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:662398-662490:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670058-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-672960:1:exon

XP_031412960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645662-645718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662398-662490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670058-670182:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672917-672960:1:exon

RANBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RANBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 3 isoform X4
translation: MALRSDSGCSEELVQAADQRSADGSSPEDGDESDREDGNYCPPVKRERTSSLTQFPPSQSEEKSSGFRLKPPILIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQPKAFSQMVLSSGTNGVNIPPDSAATSESLSNATLKSSDTEDKAGECQKKESNSTSDDDSGDKAELNAQQAFVFGQNLRDRVKLGDDSDETADVQNAGLPTSDTPSATNYFLQYISSSIENSTNSADASSNKFVFGQNMSERVLSPPKSNEGSTESNKENAATESGSESSSQEATPEKESLAESAAAYTKATARKCLLAKVEVITGEEAESNVLQIQCKLFVFDKNSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEVKNVAPEPEVTQSNEEDSDDDVLAPSGSVGSGPSDERDGQNASST
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(645662..645718,653927..653963,654043..654129,660967..661032,662398..662490,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670073..670182,670787..670907,671526..671668,672143..672323,672917..672960)
location: region:645662-672960:1
so has part: feature:645662-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:662398-662490:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670073-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-672960:1:exon

XP_031412961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645662-645718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662398-662490:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670073-670182:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672917-672960:1:exon

RANBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RANBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 3 isoform X6
translation: MALRSDSGCSEELVQAADQRSADGSSPEDGDESDREDGNYCPPVKRERTSSLTQFPPSQSEEKSSGFRLKPPILIHGQAPSAVLSSGTNGVNIPPDSAATSESLSNATLKSSDTEDKAGECQKKESNSTSDDDSGDKAELNAQQAFVFGQNLRDRVKLGDDSDETADVQNAGLPTSDTPSATNYFLQYISSSIENSTNSADASSNKFVFGQNMSERVLSPPKSNEGSTESNKENAATESGSESSSQEATPEKANNISESLAESAAAYTKATARKCLLAKVEVITGEEAESNVLQIQCKLFVFDKNSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEVKNVAPEPEVTQSNEEDSDDDVLAPSGSVGSGPSDERDGQNASST
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(645662..645718,653927..653963,654043..654129,660967..661032,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670058..670182,670787..670907,671526..671668,672143..672323,672917..672960)
location: region:645662-672960:1
so has part: feature:645662-645718:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670058-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-672960:1:exon

XP_031412963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645662-645718:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670058-670182:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:672917-672960:1:exon

RANBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RANBP3
product: RAN binding protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019609983.2
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(651438..651470,653927..653963,654043..654129,659746..659817,660967..661032,662398..662490,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670058..670182,670787..670907,671526..671668,672143..672323,672917..674552)
location: region:651438-674552:1
so has part: feature:651438-651470:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:659746-659817:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:662398-662490:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670058-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-674552:1:exon

position:651438:1
position: 651438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651438-651470:1:exon

position:651470:1
position: 651470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659746-659817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662398-662490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670058-670182:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672917-674552:1:exon

RANBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RANBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-binding protein 3 isoform X2
translation: MNSPHKRSADGSSPEDGDESDREDGNYCPPVKRERTSSLTQFPPSQSVTKNNVFMPSSFCEPSAGNSDSEPEEKSSGFRLKPPILIHGQAPSAGLPSQKPKEQQRSVLRPAVLQAPQPKAFSQMVLSSGTNGVNIPPDSAATSESLSNATLKSSDTEDKAGECQKKESNSTSDDDSGDKAELNAQQAFVFGQNLRDRVKLGDDSDETADVQNAGLPTSDTPSATNYFLQYISSSIENSTNSADASSNKFVFGQNMSERVLSPPKSNEGSTESNKENAATESGSESSSQEATPEKANNISESLAESAAAYTKATARKCLLAKVEVITGEEAESNVLQIQCKLFVFDKNSQSWVERGRGLLRLNDMASTDDGTLQSRLVMRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAALHHRILALRSRVEQEQEVKNVAPEPEVTQSNEEDSDDDVLAPSGSVGSGPSDERDGQNASST
SIO_010081: RANBP3
subclass of: SO_0000673
so part of: RANBP3
location: join(651453..651470,653927..653963,654043..654129,659746..659817,660967..661032,662398..662490,663629..663732,665739..665858,666449..666552,668505..668583,669410..669512,670058..670182,670787..670907,671526..671668,672143..672323,672917..672960)
location: region:651453-672960:1
so has part: feature:651453-651470:1:exon
so has part: feature:653927-653963:1:exon
so has part: feature:654043-654129:1:exon
so has part: feature:659746-659817:1:exon
so has part: feature:660967-661032:1:exon
so has part: feature:662398-662490:1:exon
so has part: feature:663629-663732:1:exon
so has part: feature:665739-665858:1:exon
so has part: feature:666449-666552:1:exon
so has part: feature:668505-668583:1:exon
so has part: feature:669410-669512:1:exon
so has part: feature:670058-670182:1:exon
so has part: feature:670787-670907:1:exon
so has part: feature:671526-671668:1:exon
so has part: feature:672143-672323:1:exon
so has part: feature:672917-672960:1:exon

XP_019465528.1
type: Protein
SIO_000068: ncbiprotein

position:651453:1
position: 651453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651453-651470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:653927-653963:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:654043-654129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:659746-659817:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:660967-661032:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662398-662490:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663629-663732:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:665739-665858:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666449-666552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:668505-668583:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:669410-669512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:670058-670182:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:670787-670907:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:671526-671668:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:672143-672323:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:672917-672960:1:exon

LOC104914652
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 675341..678923
location: region:675341-678923:1
so has part: feature:675341-678923:1:exon
subclass of: SO_0000010

104914652
type: Gene
SIO_000068: ncbigene

position:675341:1
position: 675341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678923:1
position: 678923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675341-678923:1:exon

LOC104914652
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914652
product: platelet glycoprotein Ib alpha chain-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724810.1
SIO_010081: LOC104914652
subclass of: SO_0000673
so part of: LOC104914652
location: join(675341..675409,676988..678923)
location: region:675341-678923:1
so has part: feature:675341-675409:1:exon
so has part: feature:676988-678923:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:675341-675409:1:exon

position:675409:1
position: 675409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:676988-678923:1:exon

position:676988:1
position: 676988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104914652
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914652
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: platelet glycoprotein Ib alpha chain-like
translation: MVMEVMDLVAYVGCYEEDPHLGEELPAGLLRDLEKLETLWLSGNRLRALPSGFFPEGHLFAYVFLTNNPWHCDCSLVYLRSWILRNEGSVYEPERGLGKTKVELAPEKVLCHSPDEHQHKPIIRFKPDCGHVGDAEEDEYDYPDVEWTTKKPLLTSLIPTYPPSSKEPTAAPRTLTQPPLTSISPPLSIPAGPDLTPTAFLTTPAHTMAPSTAPPASTSPPVTPSSTVHPSQPPSTAPFYTAPPSTSHRPTSSLTDAPSTSRHPQSTLTTRAASSPLTTTGAFSTSPSALPSPTKPESTSITTSSPSALTSPTLVVPNTTLSAHTPTLSAPLDITHFPRPSPPLPPPLLCPCSTPAQTLSVLHSQAAVKGLHWEHWVLSHCCLLRWLLYLGCLALLLLSVLLLACCLVWMCLTKHNSLQTKEVQHPLLRWGNSTQSHTTHLCIFQSPQQRSRFCTTKEVELCPEVATSHTYCTIKDLGVQRSPPAKSFCTTKELWIHHGPPNAPSNPFPTELTASKLGSLRSPSAHSLDRGVRAIGAVRVKHAANTL
SIO_010081: LOC104914652
subclass of: SO_0000673
so part of: LOC104914652
location: join(675341..675409,676988..678563)
location: region:675341-678563:1
so has part: feature:675341-675409:1:exon
so has part: feature:676988-678563:1:exon

XP_010723112.1
type: Protein
SIO_000068: ncbiprotein

position:678563:1
position: 678563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675341-675409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:676988-678563:1:exon

KLHL33
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KLHL33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(682506..687216)
location: region:682506-687216:-1
so has part: feature:682506-687216:-1:exon
subclass of: SO_0000010

100539326
type: Gene
SIO_000068: ncbigene

position:682506:-1
position: 682506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687216:-1
position: 687216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682506-687216:-1:exon

KLHL33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KLHL33
product: kelch like family member 33
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_010724768.3
SIO_010081: KLHL33
subclass of: SO_0000673
so part of: KLHL33
location: complement(join(682506..683355,683751..683921,684293..685226,685468..685995,686644..687216))
location: region:682506-687216:-1
so has part: feature:686644-687216:-1:exon
so has part: feature:685468-685995:-1:exon
so has part: feature:684293-685226:-1:exon
so has part: feature:683751-683921:-1:exon
so has part: feature:682506-683355:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686644-687216:-1:exon

position:686644:-1
position: 686644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:685468-685995:-1:exon

position:685468:-1
position: 685468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685995:-1
position: 685995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:684293-685226:-1:exon

position:684293:-1
position: 684293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685226:-1
position: 685226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:683751-683921:-1:exon

position:683751:-1
position: 683751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683921:-1
position: 683921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:682506-683355:-1:exon

position:683355:-1
position: 683355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KLHL33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 33
translation: MWVTEGPAPAQWQLRDGAHAKHFLATANDLRTAGQLVDVAVGPEGDVAHAVVLASVSSFFLCFLEDRTREMRRGPPSRVPLPPGATLWGWRALLAFAYEGTVPHGREREVEESARVLGAPRVVAACAPRPEGDHQEGGPEALEEQWETLRAMEQLHASGLGCDLQLQAGDEVIPVQRLALSCSCDFFRALFTCPMRESTHDPTAPLSTGLTPAELRLLLSFAYTGAVVGPWSAVLEAAETSLRYQAWGLLTLCLDVFTHGLTPETGLDVLAFAVAYGLAQVSRTAEDYVLATFPTVVATPAFLDLPAHLLIRLLRSDGLNVLHELEALEAASRWLKANGDGKEDLTKEVLSSVRFALMSGQELKKIPSVTAGVVDPGLLRQLVVDSLSPMVQLPCRVRSLQEVLVVCGGDKLTPNMAARKPSRNLWFAHRYLNAVGLVKHVEWRALGNFPDGPRFRHAVAVVGNTLYVLGGKRYYGIRDTLASVYRYQPMDNSWERLASMTCGRSYFAAVALDGSIYALGGSSGDLYCTDTVECYNVAADTWRRCQSLPMALCGHAACALDGALYVSGGCDEAYQCQTALLRYIPGAPATLLAPMNGQRAGHIMEEAGGQLYVAGGLCQRDGQTGYRDQLAFEVYSPKLDIWVLLSPLPHAHVVGGAAVLGGELLVLGGYSHETYRDTHLIHAYQPGARRWITRGTLPHAYTDLQVCVLTVPPALRGPSCLEDPSRSPDALCNT
SIO_010081: KLHL33
subclass of: SO_0000673
so part of: KLHL33
location: complement(join(682779..683355,683751..683921,684293..685226,685468..685990))
location: region:682779-685990:-1
so has part: feature:685468-685990:-1:exon
so has part: feature:684293-685226:-1:exon
so has part: feature:683751-683921:-1:exon
so has part: feature:682779-683355:-1:exon

XP_010723070.1
type: Protein
SIO_000068: ncbiprotein

position:682779:-1
position: 682779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685990:-1
position: 685990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685468-685990:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:684293-685226:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:683751-683921:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:682779-683355:-1:exon

NDUFA11
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NDUFA11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(687312..689763)
location: region:687312-689763:-1
so has part: feature:687312-689763:-1:exon
subclass of: SO_0000010

109363710
type: Gene
SIO_000068: ncbigene

position:687312:-1
position: 687312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689763:-1
position: 689763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687312-689763:-1:exon

NDUFA11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NDUFA11
product: NADH:ubiquinone oxidoreductase subunit A11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 181 samples with support for all annotated introns
transcript id: XM_019609986.2
SIO_010081: NDUFA11
subclass of: SO_0000673
so part of: NDUFA11
location: complement(join(687312..687512,688358..688480,689592..689763))
location: region:687312-689763:-1
so has part: feature:689592-689763:-1:exon
so has part: feature:688358-688480:-1:exon
so has part: feature:687312-687512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:689592-689763:-1:exon

position:689592:-1
position: 689592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688358-688480:-1:exon

position:688358:-1
position: 688358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688480:-1
position: 688480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:687312-687512:-1:exon

position:687512:-1
position: 687512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFA11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NDUFA11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
translation: MLFVQPRGEATLGAVFGLTTCLSAQVREEHESPLDYFIGGCTTGAVLGARAHSYMTGTVACLGFGTTAALMKIGNKEGWRLTGPPKL
SIO_010081: NDUFA11
subclass of: SO_0000673
so part of: NDUFA11
location: complement(join(687400..687512,688358..688480,689592..689619))
location: region:687400-689619:-1
so has part: feature:689592-689619:-1:exon
so has part: feature:688358-688480:-1:exon
so has part: feature:687400-687512:-1:exon

XP_019465531.1
type: Protein
SIO_000068: ncbiprotein

position:687400:-1
position: 687400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689619:-1
position: 689619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:689592-689619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688358-688480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:687400-687512:-1:exon

LOC104914642
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(691997..694402)
location: region:691997-694402:-1
so has part: feature:691997-694402:-1:exon
subclass of: SO_0000010

104914642
type: Gene
SIO_000068: ncbigene

position:691997:-1
position: 691997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694402:-1
position: 694402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691997-694402:-1:exon

LOC104914642
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914642
product: platelet glycoprotein Ib alpha chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_010724769.3
SIO_010081: LOC104914642
subclass of: SO_0000673
so part of: LOC104914642
location: complement(join(691997..693190,693717..694402))
location: region:691997-694402:-1
so has part: feature:693717-694402:-1:exon
so has part: feature:691997-693190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693717-694402:-1:exon

position:693717:-1
position: 693717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:691997-693190:-1:exon

position:693190:-1
position: 693190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104914642
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet glycoprotein Ib alpha chain-like
translation: MAMRFPALLLLILAALPPAAVPTAPPPPCPWEMNKVKDIVEVNCTGRDLGAVPAGLPEDTGILLLNANRLPSVSTAAFQPLPALQDLDLSDNGLRAVHAEAPLPSLKELLLSRNALEALPALQGLPALTRLALAHNQLRALAPAAFRAVPRLQDLDLRGNALRTLPEDAFAELRALRDLDLSDNALEELPAGLLRDLEKLETLWLSGNRLRALPSGFFPEGHLFAYVFLTNNSWHCDCSLVYLRSWILRNEGSVYEPERGLGKTKVELAPEKVLCHSPDEHQHKPIIRFKPDCGHVGDAEEDEYDYPDVEWTTKKPLVTSLP
SIO_010081: LOC104914642
subclass of: SO_0000673
so part of: LOC104914642
location: complement(join(692225..693190,693717..693719))
location: region:692225-693719:-1
so has part: feature:693717-693719:-1:exon
so has part: feature:692225-693190:-1:exon

XP_010723071.1
type: Protein
SIO_000068: ncbiprotein

position:692225:-1
position: 692225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693719:-1
position: 693719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693717-693719:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:692225-693190:-1:exon

LOC100539172
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100539172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(694687..702760)
location: region:694687-702760:-1
so has part: feature:694687-702760:-1:exon
subclass of: SO_0000010

100539172
type: Gene
SIO_000068: ncbigene

position:694687:-1
position: 694687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702760:-1
position: 702760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694687-702760:-1:exon

LOC100539172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100539172
product: butyrophilin subfamily 1 member A1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010724771.3
SIO_010081: LOC100539172
subclass of: SO_0000673
so part of: LOC100539172
location: complement(join(694687..697309,697768..697800,698272..698292,698380..698400,698515..698535,698869..698889,699080..699184,699304..699585,701343..701681,701775..701878,702407..702760))
location: region:694687-702760:-1
so has part: feature:702407-702760:-1:exon
so has part: feature:701775-701878:-1:exon
so has part: feature:701343-701681:-1:exon
so has part: feature:699304-699585:-1:exon
so has part: feature:699080-699184:-1:exon
so has part: feature:698869-698889:-1:exon
so has part: feature:698515-698535:-1:exon
so has part: feature:698380-698400:-1:exon
so has part: feature:698272-698292:-1:exon
so has part: feature:697768-697800:-1:exon
so has part: feature:694687-697309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702407-702760:-1:exon

position:702407:-1
position: 702407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701775-701878:-1:exon

position:701775:-1
position: 701775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701878:-1
position: 701878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:701343-701681:-1:exon

position:701343:-1
position: 701343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:701681:-1
position: 701681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:699304-699585:-1:exon

position:699304:-1
position: 699304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699585:-1
position: 699585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:699080-699184:-1:exon

position:699080:-1
position: 699080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699184:-1
position: 699184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:698869-698889:-1:exon

position:698869:-1
position: 698869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698889:-1
position: 698889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:698515-698535:-1:exon

position:698515:-1
position: 698515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698535:-1
position: 698535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:698380-698400:-1:exon

position:698380:-1
position: 698380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698400:-1
position: 698400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:698272-698292:-1:exon

position:698272:-1
position: 698272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698292:-1
position: 698292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:697768-697800:-1:exon

position:697768:-1
position: 697768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697800:-1
position: 697800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:694687-697309:-1:exon

position:697309:-1
position: 697309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100539172
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100539172
product: butyrophilin subfamily 1 member A1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_019609984.2
SIO_010081: LOC100539172
subclass of: SO_0000673
so part of: LOC100539172
location: complement(join(694687..697309,697768..697800,698272..698292,698380..698400,698515..698535,698869..698889,699080..699184,699304..699585,701343..701681,701775..701878,702411..702463))
location: region:694687-702463:-1
so has part: feature:702411-702463:-1:exon
so has part: feature:701775-701878:-1:exon
so has part: feature:701343-701681:-1:exon
so has part: feature:699304-699585:-1:exon
so has part: feature:699080-699184:-1:exon
so has part: feature:698869-698889:-1:exon
so has part: feature:698515-698535:-1:exon
so has part: feature:698380-698400:-1:exon
so has part: feature:698272-698292:-1:exon
so has part: feature:697768-697800:-1:exon
so has part: feature:694687-697309:-1:exon

position:702463:-1
position: 702463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702411-702463:-1:exon

position:702411:-1
position: 702411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:701775-701878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701343-701681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699304-699585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699080-699184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698869-698889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698515-698535:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698380-698400:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:698272-698292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:697768-697800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:694687-697309:-1:exon

LOC100539172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100539172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X1
translation: MGVLDVTSHSAVAFPAPALHPLLAEPGLHGWVGFMKTMFFGCCFHCPMLAAVLYSFVFHIHELQSAPFSVQGPPDPVAVAVGQDVVLQCRLFPEQSTQDMEVTWFRDQFTPFVHRYRDGQDQYGDQELRYQGRTEMRLANGSVSLRILRVQLSDKGCYTCFVRTDLGYDEAVVELKVTASGSAPLIALQRYQDGGIRVACRSAGWFPQPQLLWRDPHGQWLPSLSENVTQDGDGLYTAESVLVLASGVSQELACVVRAALHNQEKESAFSIADPFFQNARPWKIALSVVLVAVVALSIVAVYLLKMKGKYEKKIAAQAAELGDRDSTIEKQAGELVWRRYAVPIEDVKVVLDPDTAHCDLILADDGRSVKRTDRRQDVPSRPERFDPWRCVLGCKGFTERRHCWEVEVVLDGGGWTVGVSREDVRRKGEIEFSPEEGIWAVGQWAGQFQALTSPQRTLLPDVHTPTRVRVALDYELGRVAFFSVDEENPIFTFPPVSFHGIKVHPWLWLGPGTQLKMWP
SIO_010081: LOC100539172
subclass of: SO_0000673
so part of: LOC100539172
location: complement(join(696789..697309,697768..697800,698272..698292,698380..698400,698515..698535,698869..698889,699080..699184,699304..699585,701343..701681,701775..701878,702407..702498))
location: region:696789-702498:-1
so has part: feature:702407-702498:-1:exon
so has part: feature:701775-701878:-1:exon
so has part: feature:701343-701681:-1:exon
so has part: feature:699304-699585:-1:exon
so has part: feature:699080-699184:-1:exon
so has part: feature:698869-698889:-1:exon
so has part: feature:698515-698535:-1:exon
so has part: feature:698380-698400:-1:exon
so has part: feature:698272-698292:-1:exon
so has part: feature:697768-697800:-1:exon
so has part: feature:696789-697309:-1:exon

XP_010723073.1
type: Protein
SIO_000068: ncbiprotein

position:696789:-1
position: 696789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702498:-1
position: 702498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702407-702498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701775-701878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701343-701681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699304-699585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:699080-699184:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698869-698889:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698515-698535:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698380-698400:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:698272-698292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:697768-697800:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:696789-697309:-1:exon

LOC100539172
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100539172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: butyrophilin subfamily 1 member A1-like isoform X2
translation: MKTMFFGCCFHCPMLAAVLYSFVFHIHELQSAPFSVQGPPDPVAVAVGQDVVLQCRLFPEQSTQDMEVTWFRDQFTPFVHRYRDGQDQYGDQELRYQGRTEMRLANGSVSLRILRVQLSDKGCYTCFVRTDLGYDEAVVELKVTASGSAPLIALQRYQDGGIRVACRSAGWFPQPQLLWRDPHGQWLPSLSENVTQDGDGLYTAESVLVLASGVSQELACVVRAALHNQEKESAFSIADPFFQNARPWKIALSVVLVAVVALSIVAVYLLKMKGKYEKKIAAQAAELGDRDSTIEKQAGELVWRRYAVPIEDVKVVLDPDTAHCDLILADDGRSVKRTDRRQDVPSRPERFDPWRCVLGCKGFTERRHCWEVEVVLDGGGWTVGVSREDVRRKGEIEFSPEEGIWAVGQWAGQFQALTSPQRTLLPDVHTPTRVRVALDYELGRVAFFSVDEENPIFTFPPVSFHGIKVHPWLWLGPGTQLKMWP
SIO_010081: LOC100539172
subclass of: SO_0000673
so part of: LOC100539172
location: complement(join(696789..697309,697768..697800,698272..698292,698380..698400,698515..698535,698869..698889,699080..699184,699304..699585,701343..701681,701775..701868))
location: region:696789-701868:-1
so has part: feature:701775-701868:-1:exon
so has part: feature:701343-701681:-1:exon
so has part: feature:699304-699585:-1:exon
so has part: feature:699080-699184:-1:exon
so has part: feature:698869-698889:-1:exon
so has part: feature:698515-698535:-1:exon
so has part: feature:698380-698400:-1:exon
so has part: feature:698272-698292:-1:exon
so has part: feature:697768-697800:-1:exon
so has part: feature:696789-697309:-1:exon

XP_019465529.1
type: Protein
SIO_000068: ncbiprotein

position:701868:-1
position: 701868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:701775-701868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701343-701681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699304-699585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:699080-699184:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:698869-698889:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698515-698535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:698380-698400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698272-698292:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:697768-697800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:696789-697309:-1:exon

LOC104914643
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 703028..705097
location: region:703028-705097:1
so has part: feature:703028-705097:1:exon
subclass of: SO_0000010

104914643
type: Gene
SIO_000068: ncbigene

position:703028:1
position: 703028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705097:1
position: 705097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703028-705097:1:exon

LOC104914643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914643
product: thaicobrin-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_019609985.2
SIO_010081: LOC104914643
subclass of: SO_0000673
so part of: LOC104914643
location: join(703028..703306,703470..703578,704178..705097)
location: region:703028-705097:1
so has part: feature:703028-703306:1:exon
so has part: feature:703470-703578:1:exon
so has part: feature:704178-705097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:703028-703306:1:exon

position:703306:1
position: 703306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:703470-703578:1:exon

position:703470:1
position: 703470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703578:1
position: 703578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:704178-705097:1:exon

position:704178:1
position: 704178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104914643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914643
product: thaicobrin-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_010724775.3
SIO_010081: LOC104914643
subclass of: SO_0000673
so part of: LOC104914643
location: join(703030..703351,703457..703578,704178..705097)
location: region:703030-705097:1
so has part: feature:703030-703351:1:exon
so has part: feature:703457-703578:1:exon
so has part: feature:704178-705097:1:exon

position:703030:1
position: 703030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703030-703351:1:exon

position:703351:1
position: 703351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:703457-703578:1:exon

position:703457:1
position: 703457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:704178-705097:1:exon

LOC104914643
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914643
product: thaicobrin-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
transcript id: XM_010724774.3
SIO_010081: LOC104914643
subclass of: SO_0000673
so part of: LOC104914643
location: join(703030..703306,703457..703578,704178..705097)
location: region:703030-705097:1
so has part: feature:703030-703306:1:exon
so has part: feature:703457-703578:1:exon
so has part: feature:704178-705097:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:703030-703306:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:703457-703578:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704178-705097:1:exon

LOC104914643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thaicobrin-like
translation: MLISKMEGEEMETLANEEERSERADFTLDPNTANPFLLLADDGRDVRRGDVWASLPDGPERFGTEPCVLGDRGFSSGQHCWEVEVADGGDWWAVGVAQHSVRRKGVLSFTPQEGIWAVGQWFGQYYAFTCPDWTALRLAQLPRAIRVSLDFGGGQVVFADAESKDRIFAFCLASRPEEMLYPWLWVGKDSWLKLCP
SIO_010081: LOC104914643
subclass of: SO_0000673
so part of: LOC104914643
location: join(703509..703578,704178..704698)
location: region:703509-704698:1
so has part: feature:703509-703578:1:exon
so has part: feature:704178-704698:1:exon

XP_019465530.1
type: Protein
SIO_000068: ncbiprotein

position:703509:1
position: 703509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704698:1
position: 704698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703509-703578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704178-704698:1:exon

LOC104914643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thaicobrin-like
translation: MLISKMEGEEMETLANEEERSERADFTLDPNTANPFLLLADDGRDVRRGDVWASLPDGPERFGTEPCVLGDRGFSSGQHCWEVEVADGGDWWAVGVAQHSVRRKGVLSFTPQEGIWAVGQWFGQYYAFTCPDWTALRLAQLPRAIRVSLDFGGGQVVFADAESKDRIFAFCLASRPEEMLYPWLWVGKDSWLKLCP
SIO_010081: LOC104914643
subclass of: SO_0000673
so part of: LOC104914643
location: join(703509..703578,704178..704698)
location: region:703509-704698:1
so has part: feature:703509-703578:1:exon
so has part: feature:704178-704698:1:exon

XP_010723076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:703509-703578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704178-704698:1:exon

LOC104914643
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914643
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thaicobrin-like
translation: MLISKMEGEEMETLANEEERSERADFTLDPNTANPFLLLADDGRDVRRGDVWASLPDGPERFGTEPCVLGDRGFSSGQHCWEVEVADGGDWWAVGVAQHSVRRKGVLSFTPQEGIWAVGQWFGQYYAFTCPDWTALRLAQLPRAIRVSLDFGGGQVVFADAESKDRIFAFCLASRPEEMLYPWLWVGKDSWLKLCP
SIO_010081: LOC104914643
subclass of: SO_0000673
so part of: LOC104914643
location: join(703509..703578,704178..704698)
location: region:703509-704698:1
so has part: feature:703509-703578:1:exon
so has part: feature:704178-704698:1:exon

XP_010723077.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:703509-703578:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704178-704698:1:exon

MARCHF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MARCHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(708819..725326)
location: region:708819-725326:-1
so has part: feature:708819-725326:-1:exon
subclass of: SO_0000010

100538761
type: Gene
SIO_000068: ncbigene

position:708819:-1
position: 708819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725326:-1
position: 725326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708819-725326:-1:exon

MARCHF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MARCHF2
product: membrane associated ring-CH-type finger 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_003213161.4
SIO_010081: MARCHF2
subclass of: SO_0000673
so part of: MARCHF2
location: complement(join(708819..711104,712367..712576,718675..718870,721192..721397,724756..725326))
location: region:708819-725326:-1
so has part: feature:724756-725326:-1:exon
so has part: feature:721192-721397:-1:exon
so has part: feature:718675-718870:-1:exon
so has part: feature:712367-712576:-1:exon
so has part: feature:708819-711104:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:724756-725326:-1:exon

position:724756:-1
position: 724756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721192-721397:-1:exon

position:721192:-1
position: 721192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721397:-1
position: 721397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:718675-718870:-1:exon

position:718675:-1
position: 718675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718870:-1
position: 718870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:712367-712576:-1:exon

position:712367:-1
position: 712367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712576:-1
position: 712576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:708819-711104:-1:exon

position:711104:-1
position: 711104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MARCHF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MARCHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase MARCH2
translation: MREALGLALPALGSFDGFSSGARKSCLGLLSAVCKVPAAARCRAAMTTGDCCHLPGSLCDCPGSAALSKSVEDSDMGRPQFVTQVTAKDGRLLSTVIKALGAQSDGPICRICHEGGNGEGLLSPCDCTGTLGTVHKSCLEKWLSSSNTSYCELCHTEFVVERRPRPLTEWLKDPGPRNEKRTLFCDMVCFLFITPLAAISGWLCLRGAQDHLQFNSRLEAIGLIALTIALFTIYVLWTLVSFRYHCQLYSEWRRTNQKVRLMLPANRSPHPAPHSLLSAKLMKKAADETSV
SIO_010081: MARCHF2
subclass of: SO_0000673
so part of: MARCHF2
location: complement(join(710946..711104,712367..712576,718675..718870,721192..721397,724756..724860))
location: region:710946-724860:-1
so has part: feature:724756-724860:-1:exon
so has part: feature:721192-721397:-1:exon
so has part: feature:718675-718870:-1:exon
so has part: feature:712367-712576:-1:exon
so has part: feature:710946-711104:-1:exon

XP_003213209.2
type: Protein
SIO_000068: ncbiprotein

position:710946:-1
position: 710946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724860:-1
position: 724860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724756-724860:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721192-721397:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718675-718870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:712367-712576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710946-711104:-1:exon

RAB11B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RAB11B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(726945..737169)
location: region:726945-737169:-1
so has part: feature:726945-737169:-1:exon
subclass of: SO_0000010

100539016
type: Gene
SIO_000068: ncbigene

position:726945:-1
position: 726945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737169:-1
position: 737169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726945-737169:-1:exon

RAB11B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RAB11B
product: RAB11B, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 80 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031557105.1
SIO_010081: RAB11B
subclass of: SO_0000673
so part of: RAB11B
location: complement(join(726945..728746,733303..733383,734944..735137,736286..736481,737079..737169))
location: region:726945-737169:-1
so has part: feature:737079-737169:-1:exon
so has part: feature:736286-736481:-1:exon
so has part: feature:734944-735137:-1:exon
so has part: feature:733303-733383:-1:exon
so has part: feature:726945-728746:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:737079-737169:-1:exon

position:737079:-1
position: 737079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736286-736481:-1:exon

position:736286:-1
position: 736286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736481:-1
position: 736481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734944-735137:-1:exon

position:734944:-1
position: 734944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735137:-1
position: 735137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:733303-733383:-1:exon

position:733303:-1
position: 733303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733383:-1
position: 733383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:726945-728746:-1:exon

position:728746:-1
position: 728746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB11B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RAB11B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-11B
translation: MKLVIFTWQRTEMSPTWRGSCASLSFVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRSAHDESPGNNVVDISVPPTTDGQKSNKLQCCQNL
SIO_010081: RAB11B
subclass of: SO_0000673
so part of: RAB11B
location: complement(join(728601..728746,733303..733383,734944..735137,736286..736481,737079..737154))
location: region:728601-737154:-1
so has part: feature:737079-737154:-1:exon
so has part: feature:736286-736481:-1:exon
so has part: feature:734944-735137:-1:exon
so has part: feature:733303-733383:-1:exon
so has part: feature:728601-728746:-1:exon

XP_031412965.1
type: Protein
SIO_000068: ncbiprotein

position:728601:-1
position: 728601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737154:-1
position: 737154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737079-737154:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736286-736481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:734944-735137:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:733303-733383:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:728601-728746:-1:exon

ANGPTL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ANGPTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(745138..>753111)
location: region:745138-753111:-1
so has part: feature:745138-753111:-1:exon
subclass of: SO_0000010

100539175
type: Gene
SIO_000068: ncbigene

position:745138:-1
position: 745138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753111:-1
position: 753111
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:745138-753111:-1:exon

ANGPTL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ANGPTL4
product: angiopoietin like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 154 samples with support for all annotated introns
transcript id: XM_010724777.3
SIO_010081: ANGPTL4
subclass of: SO_0000673
so part of: ANGPTL4
location: complement(join(745138..746691,747237..747512,747816..747911,748003..748116,751507..751639,752108..752218,752698..>753111))
location: region:745138-753111:-1
so has part: feature:752698-753111:-1:exon
so has part: feature:752108-752218:-1:exon
so has part: feature:751507-751639:-1:exon
so has part: feature:748003-748116:-1:exon
so has part: feature:747816-747911:-1:exon
so has part: feature:747237-747512:-1:exon
so has part: feature:745138-746691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:752698-753111:-1:exon

position:752698:-1
position: 752698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752108-752218:-1:exon

position:752108:-1
position: 752108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752218:-1
position: 752218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751507-751639:-1:exon

position:751507:-1
position: 751507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:751639:-1
position: 751639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:748003-748116:-1:exon

position:748003:-1
position: 748003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748116:-1
position: 748116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:747816-747911:-1:exon

position:747816:-1
position: 747816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747911:-1
position: 747911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:747237-747512:-1:exon

position:747237:-1
position: 747237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747512:-1
position: 747512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:745138-746691:-1:exon

position:746691:-1
position: 746691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANGPTL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ANGPTL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiopoietin-related protein 4
translation: GGKERRAQFASWDEVNVIAHGLLQLGHGLKEHVDRTKGQMRELGSRLSAHNSSMGRLLRQARETQEQGELLRASVRELEGRGRQLFNLSETLRQRLEEVAADKAEIQGRLEQLEGRVRQALQARPAENQSSKDLGALQTLMDAQNSKIEELLQKIKQQQYKLDKQNLQIKSLQSKVNLLIPLHLKDNKTQSPKWKINPKKSFSHTNQSHNVSVEPALPHKLPEDCQQLFLAGQQSSGVFQVQPSGSQPFKVYCDMTAEGGWTVIQRRTDGSVDFDQLWDAYKNGFGDLHGDFWLGLEKIHHLVQEGRYNLLIELEDWEGNSQEIQFEFSLGGESTAYTLNLLGPLSGELENAIGDFRQLPFSTRDRDHDLKADTNCAKHLSGGWWFSTCGHANLNGKYFRSIPRQRHERKQGIFWKTWKGRYYPLKSTTMKIQPTVLEAEP
SIO_010081: ANGPTL4
subclass of: SO_0000673
so part of: ANGPTL4
location: complement(join(746510..746691,747237..747512,747816..747911,748003..748116,751507..751639,752108..752218,752698..>753111))
location: region:746510-753111:-1
so has part: feature:752698-753111:-1:exon
so has part: feature:752108-752218:-1:exon
so has part: feature:751507-751639:-1:exon
so has part: feature:748003-748116:-1:exon
so has part: feature:747816-747911:-1:exon
so has part: feature:747237-747512:-1:exon
so has part: feature:746510-746691:-1:exon

XP_010723079.2
type: Protein
SIO_000068: ncbiprotein

position:746510:-1
position: 746510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:752698-753111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752108-752218:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751507-751639:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:748003-748116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:747816-747911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:747237-747512:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:746510-746691:-1:exon

KANK3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KANK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 773775..779629
location: region:773775-779629:1
so has part: feature:773775-779629:1:exon
subclass of: SO_0000010

100538765
type: Gene
SIO_000068: ncbigene

position:773775:1
position: 773775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779629:1
position: 779629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773775-779629:1:exon

KANK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KANK3
product: KN motif and ankyrin repeat domains 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724811.3
SIO_010081: KANK3
subclass of: SO_0000673
so part of: KANK3
location: join(773775..773855,774116..775119,775473..775746,775814..775913,776021..776254,776685..776772,776974..777193,777290..777432,777673..777873,777963..778061,778347..779629)
location: region:773775-779629:1
so has part: feature:773775-773855:1:exon
so has part: feature:774116-775119:1:exon
so has part: feature:775473-775746:1:exon
so has part: feature:775814-775913:1:exon
so has part: feature:776021-776254:1:exon
so has part: feature:776685-776772:1:exon
so has part: feature:776974-777193:1:exon
so has part: feature:777290-777432:1:exon
so has part: feature:777673-777873:1:exon
so has part: feature:777963-778061:1:exon
so has part: feature:778347-779629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:773775-773855:1:exon

position:773855:1
position: 773855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:774116-775119:1:exon

position:774116:1
position: 774116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775119:1
position: 775119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:775473-775746:1:exon

position:775473:1
position: 775473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775746:1
position: 775746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:775814-775913:1:exon

position:775814:1
position: 775814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775913:1
position: 775913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:776021-776254:1:exon

position:776021:1
position: 776021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776254:1
position: 776254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:776685-776772:1:exon

position:776685:1
position: 776685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776772:1
position: 776772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:776974-777193:1:exon

position:776974:1
position: 776974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777193:1
position: 777193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:777290-777432:1:exon

position:777290:1
position: 777290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777432:1
position: 777432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:777673-777873:1:exon

position:777673:1
position: 777673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777873:1
position: 777873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:777963-778061:1:exon

position:777963:1
position: 777963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778061:1
position: 778061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:778347-779629:1:exon

position:778347:1
position: 778347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KANK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KANK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KN motif and ankyrin repeat domain-containing protein 3
translation: MAQPAHLNQNLPDLGGPFLYRDQDDGEKSSYSVETPYGFLLDLDFLKYVDDIESGQTLKKVPLPRRAKGTRPQPGTLRSPSSHPSAWTSTESLASTLSEDGRSALLLSPQGRAVPEPPGKQTSLPTSPPPAVRLLPPPARKCLARNPQVEKTLLETSRRLEQEQSRSQPGAPSQVHSWVPAGSEGQPGSMRMSPGSSGRSTPAAGLGTAPLQHVREQMAAALRQLRELEEQVKTIPLLEMQICELQREKAKLMEKLSAEPGKVLLDHPDGSEEQPQAEPEGEVEPAKGRTSKIAELRKLTEKLAVPERSGRSAQGKSVAARPRAAERQCRSVAVGEERAMSDGVFYYADTGAADPHPTSVGPADPGPAVPACEQTEPAVCDAGSQQPPPGSPSAPSPQRAAVLEAIGAATHPAALSAEMEDGGQEPARDGRAAPSPAARALKSIMKKRDGPPRSEAEGSKKSLQFVGVLNGEYESTSSEEEEEEEEEEGDSSSEKASADSTDSEEPAGTDTSEEEEEDAEDGDGQSELSRQQEGEGASTAPPEPPEVKEKFELSPRMREACLIVKTHLGHPTATKSKEALASSSLVLQEWFRLSSQKSSIPDTVANHLLAFAELSPALLAHVVNLADGNGNTALHYSVSHSNFHIVRLLLDTGVCNVDHQNKAGYTALMLAALAAVEQEDDMNVVRRLFSMGNVNAKASQAGQTALMLAVSHGRQEMVEALLACGADVNLQDEEGSTALMCACEHGRVETVKLLLAQPTCDVSIVDSDGNNAVTIALEAGHSNIAVLLYAHLNGTKAQPQQGTSTAGTKSPVSPKKPN
SIO_010081: KANK3
subclass of: SO_0000673
so part of: KANK3
location: join(773819..773855,774116..775119,775473..775746,775814..775913,776021..776254,776685..776772,776974..777193,777290..777432,777673..777873,777963..778061,778347..778403)
location: region:773819-778403:1
so has part: feature:773819-773855:1:exon
so has part: feature:774116-775119:1:exon
so has part: feature:775473-775746:1:exon
so has part: feature:775814-775913:1:exon
so has part: feature:776021-776254:1:exon
so has part: feature:776685-776772:1:exon
so has part: feature:776974-777193:1:exon
so has part: feature:777290-777432:1:exon
so has part: feature:777673-777873:1:exon
so has part: feature:777963-778061:1:exon
so has part: feature:778347-778403:1:exon

XP_010723113.1
type: Protein
SIO_000068: ncbiprotein

position:773819:1
position: 773819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778403:1
position: 778403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:773819-773855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:774116-775119:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:775473-775746:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:775814-775913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776021-776254:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:776685-776772:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:776974-777193:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777290-777432:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:777673-777873:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:777963-778061:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:778347-778403:1:exon

NDUFA7
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NDUFA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 781857..782842
location: region:781857-782842:1
so has part: feature:781857-782842:1:exon
subclass of: SO_0000010

100551441
type: Gene
SIO_000068: ncbigene

position:781857:1
position: 781857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782842:1
position: 782842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781857-782842:1:exon

NDUFA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NDUFA7
product: NADH:ubiquinone oxidoreductase subunit A7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010724778.3
SIO_010081: NDUFA7
subclass of: SO_0000673
so part of: NDUFA7
location: join(781857..781965,782075..782124,782221..782370,782686..782842)
location: region:781857-782842:1
so has part: feature:781857-781965:1:exon
so has part: feature:782075-782124:1:exon
so has part: feature:782221-782370:1:exon
so has part: feature:782686-782842:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:781857-781965:1:exon

position:781965:1
position: 781965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:782075-782124:1:exon

position:782075:1
position: 782075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782124:1
position: 782124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:782221-782370:1:exon

position:782221:1
position: 782221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782370:1
position: 782370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782686-782842:1:exon

position:782686:1
position: 782686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDUFA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NDUFA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7
translation: MHRTLPPRPSLPFTTAKMATATRLIQRLRNFLAGRDLQAKLALRYTEISKRTQPPPRLPVGPSHKLADNYYCTRDGRREAGPPIVVASGLKTLTAGTEGSSSSSAVTAADKKPVTPGPVLKKWEISKDQPYL
SIO_010081: NDUFA7
subclass of: SO_0000673
so part of: NDUFA7
location: join(781864..781965,782075..782124,782221..782370,782686..782782)
location: region:781864-782782:1
so has part: feature:781864-781965:1:exon
so has part: feature:782075-782124:1:exon
so has part: feature:782221-782370:1:exon
so has part: feature:782686-782782:1:exon

XP_010723080.1
type: Protein
SIO_000068: ncbiprotein

position:781864:1
position: 781864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782782:1
position: 782782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781864-781965:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782075-782124:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:782221-782370:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782686-782782:1:exon

CD320
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CD320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 784580..788990
location: region:784580-788990:1
so has part: feature:784580-788990:1:exon
subclass of: SO_0000010

100538608
type: Gene
SIO_000068: ncbigene

position:784580:1
position: 784580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788990:1
position: 788990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784580-788990:1:exon

CD320
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: CD320
product: CD320 molecule, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XR_004162101.1
SIO_010081: CD320
so part of: CD320
location: join(784580..784811,785043..785219,786390..786467,787340..787488,787618..787797,787891..788990)
location: region:784580-788990:1
so has part: feature:784580-784811:1:exon
so has part: feature:785043-785219:1:exon
so has part: feature:786390-786467:1:exon
so has part: feature:787340-787488:1:exon
so has part: feature:787618-787797:1:exon
so has part: feature:787891-788990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784580-784811:1:exon

position:784811:1
position: 784811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:785043-785219:1:exon

position:785043:1
position: 785043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785219:1
position: 785219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:786390-786467:1:exon

position:786390:1
position: 786390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786467:1
position: 786467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:787340-787488:1:exon

position:787340:1
position: 787340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787488:1
position: 787488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:787618-787797:1:exon

position:787618:1
position: 787618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787797:1
position: 787797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:787891-788990:1:exon

position:787891:1
position: 787891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CD320
product: CD320 molecule, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_003214022.4
SIO_010081: CD320
subclass of: SO_0000673
so part of: CD320
location: join(784580..784811,785043..785219,786390..786467,787340..787488,787891..788990)
location: region:784580-788990:1
so has part: feature:784580-784811:1:exon
so has part: feature:785043-785219:1:exon
so has part: feature:786390-786467:1:exon
so has part: feature:787340-787488:1:exon
so has part: feature:787891-788990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784580-784811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785043-785219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:786390-786467:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:787340-787488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:787891-788990:1:exon

CD320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CD320
product: CD320 molecule, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 210 samples with support for all annotated introns
transcript id: XM_010724780.3
SIO_010081: CD320
subclass of: SO_0000673
so part of: CD320
location: join(784580..784811,785043..785219,786390..786467,787891..788990)
location: region:784580-788990:1
so has part: feature:784580-784811:1:exon
so has part: feature:785043-785219:1:exon
so has part: feature:786390-786467:1:exon
so has part: feature:787891-788990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:784580-784811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785043-785219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:786390-786467:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:787891-788990:1:exon

CD320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CD320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD320 antigen isoform X2
translation: MSAQGAWPLEGRAPARGRLLAERRGVAHALCPPATRFIDARRQAGDRHGGAAVGLVVLLRAVRPLPTSASGNGSLAQCLPEQFHCSEPYDPQTDCYPLEWLCDGHPDCDDGRDEWSCGTNWSTAVPTAGGTEASAVPSPRHALPSRNHGRMWMLIVAGIFHCEVVRWD
SIO_010081: CD320
subclass of: SO_0000673
so part of: CD320
location: join(784595..784811,785043..785219,786390..786467,787891..787925)
location: region:784595-787925:1
so has part: feature:784595-784811:1:exon
so has part: feature:785043-785219:1:exon
so has part: feature:786390-786467:1:exon
so has part: feature:787891-787925:1:exon

XP_010723082.1
type: Protein
SIO_000068: ncbiprotein

position:784595:1
position: 784595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:787925:1
position: 787925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784595-784811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785043-785219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:786390-786467:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:787891-787925:1:exon

CD320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CD320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CD320 antigen isoform X1
translation: MSAQGAWPLEGRAPARGRLLAERRGVAHALCPPATRFIDARRQAGDRHGGAAVGLVVLLRAVRPLPTSASGNGSLAQCLPEQFHCSEPYDPQTDCYPLEWLCDGHPDCDDGRDEWSCGTNWSTAVPTAGGTEASAVPSPRHALPSRNHGRMWMLIVAVLLSCLVAVGGIAAWGKSEAKSRSDIFSLENVSREQLVPDKSQADLFS
SIO_010081: CD320
subclass of: SO_0000673
so part of: CD320
location: join(784595..784811,785043..785219,786390..786467,787340..787485)
location: region:784595-787485:1
so has part: feature:784595-784811:1:exon
so has part: feature:785043-785219:1:exon
so has part: feature:786390-786467:1:exon
so has part: feature:787340-787485:1:exon

XP_003214070.1
type: Protein
SIO_000068: ncbiprotein

position:787485:1
position: 787485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:784595-784811:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:785043-785219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:786390-786467:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:787340-787485:1:exon

LOC100538454
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100538454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 790457..793252
location: region:790457-793252:1
so has part: feature:790457-793252:1:exon
subclass of: SO_0000010

100538454
type: Gene
SIO_000068: ncbigene

position:790457:1
position: 790457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793252:1
position: 793252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790457-793252:1:exon

LOC100538454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100538454
product: potassium voltage-gated channel subfamily V member 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_010724812.2
SIO_010081: LOC100538454
subclass of: SO_0000673
so part of: LOC100538454
location: join(790457..791704,792738..793252)
location: region:790457-793252:1
so has part: feature:790457-791704:1:exon
so has part: feature:792738-793252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:790457-791704:1:exon

position:791704:1
position: 791704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:792738-793252:1:exon

position:792738:1
position: 792738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100538454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100538454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily V member 2-like
translation: MGRLGRRRASLCASLKPGARRGGRTPEEEELHIPFAQDSLVKQWSSMQNVADRSQEESKVPVWRNKYFLNINVGGKLFHIACRVVARYPVTRLGKLATCSDPTKKLKLCDDYSVQKNEYFFDRDPSIFHYIFHFYCSGVLWIMDEMCPSNFVEEIEYWGIHLKHSQRCCRILFEEKQDELSEYLKIQKELEAELEPMDSAGQFEGKCLGKFRRAIWNLIENPYSSVPAKIIAVMSSFFVLISIVGMTLSTVEEMKHKTGKKWMEQMEMICAIFFTSEYLMRLISSSSFKNFLRAALNAIDLVAILPFYIQILFENLDEGETLYHEELHKMENVSKLGKVLKLIKLMRIFRILKLARHSTGLRAFGFTMRQCYQQVCCLFLFIAMGVFTFSALMHSVEHDVPGTNFTSIPYAWWWAAVSLSTVGYGDTVPDTVLGRIVAFGCISFGIILNGMPISILYNKFSDYYAKLKAHENESSLSLKLSRRLRLKQRILQKVSQCCCPDPRHVGC
SIO_010081: LOC100538454
subclass of: SO_0000673
so part of: LOC100538454
location: join(790457..791704,792738..793013)
location: region:790457-793013:1
so has part: feature:790457-791704:1:exon
so has part: feature:792738-793013:1:exon

XP_010723114.1
type: Protein
SIO_000068: ncbiprotein

position:793013:1
position: 793013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790457-791704:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792738-793013:1:exon

LOC104909259
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104909259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(793583..794507)
location: region:793583-794507:-1
so has part: feature:793583-794507:-1:exon
subclass of: SO_0000010

104909259
type: Gene
SIO_000068: ncbigene

position:793583:-1
position: 793583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794507:-1
position: 794507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793583-794507:-1:exon

LOC104909259
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104909259
product: protein decapentaplegic-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_010724813.2
SIO_010081: LOC104909259
subclass of: SO_0000673
so part of: LOC104909259
location: complement(join(793583..794002,794252..794507))
location: region:793583-794507:-1
so has part: feature:794252-794507:-1:exon
so has part: feature:793583-794002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:794252-794507:-1:exon

position:794252:-1
position: 794252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:793583-794002:-1:exon

position:794002:-1
position: 794002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104909259
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104909259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein decapentaplegic-like
translation: MGTLPQPRPTVVTLCLLPQVRDWTQDESSNRGLLVTVHSLGGSTLEAPAVQFASSGDHHESKKPMLVLFTDDGRRGASLPMAGVPASQPRDFPAKLTGPRSTRSLDRLQPCQRHPLSVDFEEIGWSGWIISPRGYNAYHCRGSCPFPLGENMRPTNHATVQSIINALKLSEGVSSPCCVPDKLYSINLLYFDDDENVVLKQYDDMVAGSCGCH
SIO_010081: LOC104909259
subclass of: SO_0000673
so part of: LOC104909259
location: complement(join(793617..794002,794252..794507))
location: region:793617-794507:-1
so has part: feature:794252-794507:-1:exon
so has part: feature:793617-794002:-1:exon

XP_010723115.1
type: Protein
SIO_000068: ncbiprotein

position:793617:-1
position: 793617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794252-794507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:793617-794002:-1:exon

POLE4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: POLE4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(798285..>800250)
location: region:798285-800250:-1
so has part: feature:798285-800250:-1:exon
subclass of: SO_0000010

104914653
type: Gene
SIO_000068: ncbigene

position:798285:-1
position: 798285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800250:-1
position: 800250
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798285-800250:-1:exon

POLE4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: POLE4
product: DNA polymerase epsilon 4, accessory subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_019609988.2
SIO_010081: POLE4
subclass of: SO_0000673
so part of: POLE4
location: complement(join(798285..798576,799932..799973,800094..>800250))
location: region:798285-800250:-1
so has part: feature:800094-800250:-1:exon
so has part: feature:799932-799973:-1:exon
so has part: feature:798285-798576:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:800094-800250:-1:exon

position:800094:-1
position: 800094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:799932-799973:-1:exon

position:799932:-1
position: 799932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799973:-1
position: 799973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:798285-798576:-1:exon

position:798576:-1
position: 798576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLE4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: POLE4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase epsilon subunit 4
translation: GAGPGAGLRSAPFLRATLRVLCPQELFVETIAKDAFVYAQQGKRKTLQRKDLDNAIEAVDEFAFLEGGAVAELLS
SIO_010081: POLE4
subclass of: SO_0000673
so part of: POLE4
location: complement(join(798548..798576,799932..799973,800094..>800250))
location: region:798548-800250:-1
so has part: feature:800094-800250:-1:exon
so has part: feature:799932-799973:-1:exon
so has part: feature:798548-798576:-1:exon

XP_019465533.1
type: Protein
SIO_000068: ncbiprotein

position:798548:-1
position: 798548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800094-800250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:799932-799973:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798548-798576:-1:exon

PRAM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PRAM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <803279..806217
location: region:803279-806217:1
so has part: feature:803279-806217:1:exon
subclass of: SO_0000010

109363699
type: Gene
SIO_000068: ncbigene

position:803279:1
position: 803279
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:806217:1
position: 806217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803279-806217:1:exon

PRAM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PRAM1
product: PML-RARA regulated adaptor molecule 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_019609941.2
SIO_010081: PRAM1
subclass of: SO_0000673
so part of: PRAM1
location: join(<803279..803366,804216..804261,804430..804557,804745..804799,805007..805100,805304..805465,805599..805632,805846..805880,806039..806217)
location: region:803279-806217:1
so has part: feature:803279-803366:1:exon
so has part: feature:804216-804261:1:exon
so has part: feature:804430-804557:1:exon
so has part: feature:804745-804799:1:exon
so has part: feature:805007-805100:1:exon
so has part: feature:805304-805465:1:exon
so has part: feature:805599-805632:1:exon
so has part: feature:805846-805880:1:exon
so has part: feature:806039-806217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:803279-803366:1:exon

position:803366:1
position: 803366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:804216-804261:1:exon

position:804216:1
position: 804216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804261:1
position: 804261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:804430-804557:1:exon

position:804430:1
position: 804430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804557:1
position: 804557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:804745-804799:1:exon

position:804745:1
position: 804745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804799:1
position: 804799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:805007-805100:1:exon

position:805007:1
position: 805007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805100:1
position: 805100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:805304-805465:1:exon

position:805304:1
position: 805304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805465:1
position: 805465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:805599-805632:1:exon

position:805599:1
position: 805599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805632:1
position: 805632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:805846-805880:1:exon

position:805846:1
position: 805846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805880:1
position: 805880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:806039-806217:1:exon

position:806039:1
position: 806039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRAM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PRAM1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: PML-RARA-regulated adapter molecule 1
translation: VDLEKFQFHRAATPGEPGRTAVGSRSAVLGSPTPFPPRDALSTAGGEEEIYDDVESVELLRRDRSFPPPPTFRPPAHLHPRGGGGRAGGGAARAPSTVALLVAAQRVAQNSWKTKPMTLKECKKEEKADREFQKKFKFEGNITVLTQMMVDPATTEKRGGGRXLPLRRGEILDVIQFTNKEQILCRNSQRRYGYVPRAVMLHLDRDIYDDVDLYE
SIO_010081: PRAM1
subclass of: SO_0000673
so part of: PRAM1
location: join(<803279..803366,804216..804261,804430..804557,804745..804799,805007..805100,805304..805465,805599..805632,805846..805880,806039..806043)
location: region:803279-806043:1
so has part: feature:803279-803366:1:exon
so has part: feature:804216-804261:1:exon
so has part: feature:804430-804557:1:exon
so has part: feature:804745-804799:1:exon
so has part: feature:805007-805100:1:exon
so has part: feature:805304-805465:1:exon
so has part: feature:805599-805632:1:exon
so has part: feature:805846-805880:1:exon
so has part: feature:806039-806043:1:exon

XP_019465486.1
type: Protein
SIO_000068: ncbiprotein

position:806043:1
position: 806043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803279-803366:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:804216-804261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:804430-804557:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:804745-804799:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805007-805100:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:805304-805465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:805599-805632:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:805846-805880:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806039-806043:1:exon

LOC100539942
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100539942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 806255..812866
location: region:806255-812866:1
so has part: feature:806255-812866:1:exon
subclass of: SO_0000010

100539942
type: Gene
SIO_000068: ncbigene

position:806255:1
position: 806255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812866:1
position: 812866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806255-812866:1:exon

LOC100539942
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100539942
product: excitatory amino acid transporter 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031557106.1
SIO_010081: LOC100539942
subclass of: SO_0000673
so part of: LOC100539942
location: join(806255..808066,808281..808493,808645..808687,809349..809571,809874..809973,810136..810369,810908..811102,811284..811418,812092..812191,812300..812866)
location: region:806255-812866:1
so has part: feature:806255-808066:1:exon
so has part: feature:808281-808493:1:exon
so has part: feature:808645-808687:1:exon
so has part: feature:809349-809571:1:exon
so has part: feature:809874-809973:1:exon
so has part: feature:810136-810369:1:exon
so has part: feature:810908-811102:1:exon
so has part: feature:811284-811418:1:exon
so has part: feature:812092-812191:1:exon
so has part: feature:812300-812866:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806255-808066:1:exon

position:808066:1
position: 808066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808281-808493:1:exon

position:808281:1
position: 808281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808493:1
position: 808493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:808645-808687:1:exon

position:808645:1
position: 808645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808687:1
position: 808687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:809349-809571:1:exon

position:809349:1
position: 809349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809571:1
position: 809571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:809874-809973:1:exon

position:809874:1
position: 809874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809973:1
position: 809973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:810136-810369:1:exon

position:810136:1
position: 810136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810369:1
position: 810369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:810908-811102:1:exon

position:810908:1
position: 810908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811102:1
position: 811102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:811284-811418:1:exon

position:811284:1
position: 811284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811418:1
position: 811418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:812092-812191:1:exon

position:812092:1
position: 812092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812191:1
position: 812191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:812300-812866:1:exon

position:812300:1
position: 812300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100539942
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100539942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: excitatory amino acid transporter 5-like
translation: MLCSLQEKQYFSFPGELLMRMLKMLILPLITSSLMSGLATMEPRACGKMGVITITYYLWTTFMAVTMGIILVVSIHPGAAAQKEDYSAGKVVLSSADALLDLIRNMFPSNLVEASFQQYRTVIVPVVKSPRFPTIPGKSLSFIYFAPDEENPEIHRPVFLELTPSPEMTYRTLPGTSNEMNVLGIVIFSATIGLLLGKMGERGAPLVNVCQCLNEAVMKIVSMAVWYFPFGIVFLIAGKILEMEDPSVTSQKLGLYAITVVSGLAIHGLVLLPLLFILITKKNPYAFIKGILQALLIALATSSSSATLPITLKCLLENNGIDRRVARFVLPVGATINMDGTALYEAVAAIFIAQVNEYDLDLGQIVTISITATAASIGAAGIPQSGLVTMVIVLTSVGLPTADITLIIAVDWALDRFRTMTNVLGDALAAGIIQHVCEKDFAPKPPRQDTVSDTDKFPSAEPPLLHPKDNVIQLLEDTLFEQMGVHYNICQV
SIO_010081: LOC100539942
subclass of: SO_0000673
so part of: LOC100539942
location: join(807969..808066,808281..808493,808645..808687,809349..809571,809874..809973,810136..810369,810908..811102,811284..811418,812092..812191,812300..812437)
location: region:807969-812437:1
so has part: feature:807969-808066:1:exon
so has part: feature:808281-808493:1:exon
so has part: feature:808645-808687:1:exon
so has part: feature:809349-809571:1:exon
so has part: feature:809874-809973:1:exon
so has part: feature:810136-810369:1:exon
so has part: feature:810908-811102:1:exon
so has part: feature:811284-811418:1:exon
so has part: feature:812092-812191:1:exon
so has part: feature:812300-812437:1:exon

XP_031412966.1
type: Protein
SIO_000068: ncbiprotein

position:807969:1
position: 807969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812437:1
position: 812437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807969-808066:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808281-808493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808645-808687:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:809349-809571:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:809874-809973:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:810136-810369:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:810908-811102:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:811284-811418:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:812092-812191:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:812300-812437:1:exon

ELAVL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ELAVL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(820841..844750)
location: region:820841-844750:-1
so has part: feature:820841-844750:-1:exon
subclass of: SO_0000010

100539787
type: Gene
SIO_000068: ncbigene

position:820841:-1
position: 820841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844750:-1
position: 844750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820841-844750:-1:exon

ELAVL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ELAVL1
product: ELAV like RNA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 148 samples with support for all annotated introns
transcript id: XM_010724781.3
SIO_010081: ELAVL1
subclass of: SO_0000673
so part of: ELAVL1
location: complement(join(820841..827017,828142..828255,832137..832362,835865..836018,836288..836391,844549..844750))
location: region:820841-844750:-1
so has part: feature:844549-844750:-1:exon
so has part: feature:836288-836391:-1:exon
so has part: feature:835865-836018:-1:exon
so has part: feature:832137-832362:-1:exon
so has part: feature:828142-828255:-1:exon
so has part: feature:820841-827017:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:844549-844750:-1:exon

position:844549:-1
position: 844549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:836288-836391:-1:exon

position:836288:-1
position: 836288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836391:-1
position: 836391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:835865-836018:-1:exon

position:835865:-1
position: 835865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836018:-1
position: 836018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:832137-832362:-1:exon

position:832137:-1
position: 832137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832362:-1
position: 832362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:828142-828255:-1:exon

position:828142:-1
position: 828142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:828255:-1
position: 828255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:820841-827017:-1:exon

position:827017:-1
position: 827017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELAVL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ELAVL1
product: ELAV like RNA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010724782.3
SIO_010081: ELAVL1
subclass of: SO_0000673
so part of: ELAVL1
location: complement(join(820841..827017,832137..832362,835865..836018,836288..836391,844549..844749))
location: region:820841-844749:-1
so has part: feature:844549-844749:-1:exon
so has part: feature:836288-836391:-1:exon
so has part: feature:835865-836018:-1:exon
so has part: feature:832137-832362:-1:exon
so has part: feature:820841-827017:-1:exon

position:844749:-1
position: 844749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:844549-844749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836288-836391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835865-836018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832137-832362:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:820841-827017:-1:exon

ELAVL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ELAVL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELAV-like protein 1 isoform X2
translation: MSNGYEDHMAEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLCHSPARRFGGPVHHQAQRFRFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNKSHK
SIO_010081: ELAVL1
subclass of: SO_0000673
so part of: ELAVL1
location: complement(join(826693..827017,832137..832362,835865..836018,836288..836391,844549..844720))
location: region:826693-844720:-1
so has part: feature:844549-844720:-1:exon
so has part: feature:836288-836391:-1:exon
so has part: feature:835865-836018:-1:exon
so has part: feature:832137-832362:-1:exon
so has part: feature:826693-827017:-1:exon

XP_010723084.1
type: Protein
SIO_000068: ncbiprotein

position:826693:-1
position: 826693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844720:-1
position: 844720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:844549-844720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836288-836391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835865-836018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832137-832362:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:826693-827017:-1:exon

ELAVL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ELAVL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ELAV-like protein 1 isoform X1
translation: MSNGYEDHMAEDCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTLNGLRLQSKTIKVSYARPSSEVIKDANLYISGLPRSMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITNFNGHKPPGSSEPITVKFAANPNQNKNVALLSQLCHSPARRFGGPVHHQAQRFRSAENQDLPPPCPWQRAARVPHLSGLHITSGTPQFGNPWFSPMGVDHMSGLSGVNVPGNASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKILQVSFKTNKSHK
SIO_010081: ELAVL1
subclass of: SO_0000673
so part of: ELAVL1
location: complement(join(826693..827017,828142..828255,832137..832362,835865..836018,836288..836391,844549..844720))
location: region:826693-844720:-1
so has part: feature:844549-844720:-1:exon
so has part: feature:836288-836391:-1:exon
so has part: feature:835865-836018:-1:exon
so has part: feature:832137-832362:-1:exon
so has part: feature:828142-828255:-1:exon
so has part: feature:826693-827017:-1:exon

XP_010723083.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:844549-844720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836288-836391:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835865-836018:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832137-832362:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828142-828255:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:826693-827017:-1:exon

MATK
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MATK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 854912..860497
location: region:854912-860497:1
so has part: feature:854912-860497:1:exon
subclass of: SO_0000010

100541640
type: Gene
SIO_000068: ncbigene

position:854912:1
position: 854912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860497:1
position: 860497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854912-860497:1:exon

MATK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MATK
product: megakaryocyte-associated tyrosine kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_010724784.3
SIO_010081: MATK
subclass of: SO_0000673
so part of: MATK
location: join(854912..855355,856407..856462,856631..856744,856838..856953,857359..857578,858248..858341,858417..858482,858608..858707,858788..858872,859007..859080,859225..859420,859692..859778,859856..860497)
location: region:854912-860497:1
so has part: feature:854912-855355:1:exon
so has part: feature:856407-856462:1:exon
so has part: feature:856631-856744:1:exon
so has part: feature:856838-856953:1:exon
so has part: feature:857359-857578:1:exon
so has part: feature:858248-858341:1:exon
so has part: feature:858417-858482:1:exon
so has part: feature:858608-858707:1:exon
so has part: feature:858788-858872:1:exon
so has part: feature:859007-859080:1:exon
so has part: feature:859225-859420:1:exon
so has part: feature:859692-859778:1:exon
so has part: feature:859856-860497:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:854912-855355:1:exon

position:855355:1
position: 855355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:856407-856462:1:exon

position:856407:1
position: 856407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856462:1
position: 856462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:856631-856744:1:exon

position:856631:1
position: 856631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856744:1
position: 856744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:856838-856953:1:exon

position:856838:1
position: 856838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:856953:1
position: 856953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:857359-857578:1:exon

position:857359:1
position: 857359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:857578:1
position: 857578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:858248-858341:1:exon

position:858248:1
position: 858248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858341:1
position: 858341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:858417-858482:1:exon

position:858417:1
position: 858417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858482:1
position: 858482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:858608-858707:1:exon

position:858608:1
position: 858608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858707:1
position: 858707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:858788-858872:1:exon

position:858788:1
position: 858788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:858872:1
position: 858872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:859007-859080:1:exon

position:859007:1
position: 859007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859080:1
position: 859080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:859225-859420:1:exon

position:859225:1
position: 859225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859420:1
position: 859420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:859692-859778:1:exon

position:859692:1
position: 859692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:859778:1
position: 859778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:859856-860497:1:exon

position:859856:1
position: 859856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MATK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MATK
product: megakaryocyte-associated tyrosine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_010724785.3
SIO_010081: MATK
subclass of: SO_0000673
so part of: MATK
location: join(854918..855355,856407..856462,856631..856744,856838..856953,857359..857578,858248..858341,858417..858482,858608..858707,858788..858872,859007..859080,859225..859420,859692..859778,859875..860497)
location: region:854918-860497:1
so has part: feature:854918-855355:1:exon
so has part: feature:856407-856462:1:exon
so has part: feature:856631-856744:1:exon
so has part: feature:856838-856953:1:exon
so has part: feature:857359-857578:1:exon
so has part: feature:858248-858341:1:exon
so has part: feature:858417-858482:1:exon
so has part: feature:858608-858707:1:exon
so has part: feature:858788-858872:1:exon
so has part: feature:859007-859080:1:exon
so has part: feature:859225-859420:1:exon
so has part: feature:859692-859778:1:exon
so has part: feature:859875-860497:1:exon

position:854918:1
position: 854918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:854918-855355:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:856407-856462:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856631-856744:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856838-856953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:857359-857578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858248-858341:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858417-858482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858608-858707:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:858788-858872:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859007-859080:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859225-859420:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859692-859778:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:859875-860497:1:exon

position:859875:1
position: 859875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MATK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MATK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: megakaryocyte-associated tyrosine-protein kinase isoform X1
translation: MSRKHWPAGTQCVTKHDHTKPKAGELAFRKGDVVTIIEAVEGRNWFRARHNESGQEGLLAAGALRERGAIRADHRLSLMPWFHGKISGVEAVQELQPPEDGLFLVRESVRHPGDYVLCVSFGKEVIHYRVLHQENTLSIDSEQYFCNLIDMIEHYTEQQGALCTKLVKPKAKSGMKSAEEELAKAGWLLNLQHLTLGERIGQGEFGDVLQGEYMGQKVAVKNIKCDVTAQAFLAETAAMTKVRHKNLVRLLGVILHNGLYIVMEFMSKGNLVNFLRTRGRALVPLPQLLQFSLDVAQGMDYLESKKLVHRDLAARNILISEDNVAKVSDFGLARVNPHGEDTTLLPVKWTAPEALKHNKFSSKSDVWSYGILLWEVFSFGRAPYPKLLPAPPAEPEGGDRAAGAGVPHGAPRGLPAHRVCTDEELLGDGAGQAAVLQEAHREAAERAEAPEGRLTYAPHPRSSQDPQEKPPSWGAV
SIO_010081: MATK
subclass of: SO_0000673
so part of: MATK
location: join(856454..856462,856631..856744,856838..856953,857359..857578,858248..858341,858417..858482,858608..858707,858788..858872,859007..859080,859225..859420,859692..859778,859856..860125)
location: region:856454-860125:1
so has part: feature:856454-856462:1:exon
so has part: feature:856631-856744:1:exon
so has part: feature:856838-856953:1:exon
so has part: feature:857359-857578:1:exon
so has part: feature:858248-858341:1:exon
so has part: feature:858417-858482:1:exon
so has part: feature:858608-858707:1:exon
so has part: feature:858788-858872:1:exon
so has part: feature:859007-859080:1:exon
so has part: feature:859225-859420:1:exon
so has part: feature:859692-859778:1:exon
so has part: feature:859856-860125:1:exon

XP_010723086.1
type: Protein
SIO_000068: ncbiprotein

position:856454:1
position: 856454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:860125:1
position: 860125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856454-856462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:856631-856744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856838-856953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857359-857578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858248-858341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858417-858482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858608-858707:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858788-858872:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859007-859080:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859225-859420:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859692-859778:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859856-860125:1:exon

MATK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MATK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: megakaryocyte-associated tyrosine-protein kinase isoform X2
translation: MSRKHWPAGTQCVTKHDHTKPKAGELAFRKGDVVTIIEAVEGRNWFRARHNESGQEGLLAAGALRERGAIRADHRLSLMPWFHGKISGVEAVQELQPPEDGLFLVRESVRHPGDYVLCVSFGKEVIHYRVLHQENTLSIDSEQYFCNLIDMIEHYTEQQGALCTKLVKPKAKSGMKSAEEELAKAGWLLNLQHLTLGERIGQGEFGDVLQGEYMGQKVAVKNIKCDVTAQAFLAETAAMTKVRHKNLVRLLGVILHNGLYIVMEFMSKGNLVNFLRTRGRALVPLPQLLQFSLDVAQGMDYLESKKLVHRDLAARNILISEDNVAKVSDFGLARVNPHGEDTTLLPVKWTAPEALKHNKFSSKSDVWSYGILLWEVFSFGRAPYPKLSLKEVTEQLEQGYRMEPPEGCPPTVYALMRSCWEMEPGKRPSFKKLTEKLQKELKHLKDV
SIO_010081: MATK
subclass of: SO_0000673
so part of: MATK
location: join(856454..856462,856631..856744,856838..856953,857359..857578,858248..858341,858417..858482,858608..858707,858788..858872,859007..859080,859225..859420,859692..859778,859875..860057)
location: region:856454-860057:1
so has part: feature:856454-856462:1:exon
so has part: feature:856631-856744:1:exon
so has part: feature:856838-856953:1:exon
so has part: feature:857359-857578:1:exon
so has part: feature:858248-858341:1:exon
so has part: feature:858417-858482:1:exon
so has part: feature:858608-858707:1:exon
so has part: feature:858788-858872:1:exon
so has part: feature:859007-859080:1:exon
so has part: feature:859225-859420:1:exon
so has part: feature:859692-859778:1:exon
so has part: feature:859875-860057:1:exon

XP_010723087.1
type: Protein
SIO_000068: ncbiprotein

position:860057:1
position: 860057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856454-856462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:856631-856744:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856838-856953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:857359-857578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:858248-858341:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:858417-858482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:858608-858707:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858788-858872:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:859007-859080:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:859225-859420:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:859692-859778:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:859875-860057:1:exon

LOC100541793
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100541793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 860572..864188
location: region:860572-864188:1
so has part: feature:860572-864188:1:exon
subclass of: SO_0000010

100541793
type: Gene
SIO_000068: ncbigene

position:860572:1
position: 860572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864188:1
position: 864188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:860572-864188:1:exon

LOC100541793
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100541793
product: complexin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_003213177.4
SIO_010081: LOC100541793
subclass of: SO_0000673
so part of: LOC100541793
location: join(860572..861292,862018..862105,862417..864188)
location: region:860572-864188:1
so has part: feature:860572-861292:1:exon
so has part: feature:862018-862105:1:exon
so has part: feature:862417-864188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:860572-861292:1:exon

position:861292:1
position: 861292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:862018-862105:1:exon

position:862018:1
position: 862018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862105:1
position: 862105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862417-864188:1:exon

position:862417:1
position: 862417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100541793
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100541793
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complexin-3-like
translation: MAAFFTAALRNLRGGEEEPKAPPKDGKAAALPHGMSREEFEEYQRQLLEEKIERDKTFAHKKAERATVRMHLRDKYHLAQDERDDAQLHVVGGAVELPQELAAMVRGEEEEEEEEGTFAFLTKLQDVDLVALRGRALGTVDEVKEKCSLM
SIO_010081: LOC100541793
subclass of: SO_0000673
so part of: LOC100541793
location: join(861141..861292,862018..862105,862417..862629)
location: region:861141-862629:1
so has part: feature:861141-861292:1:exon
so has part: feature:862018-862105:1:exon
so has part: feature:862417-862629:1:exon

XP_003213225.1
type: Protein
SIO_000068: ncbiprotein

position:861141:1
position: 861141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862629:1
position: 862629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861141-861292:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:862018-862105:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862417-862629:1:exon

RAX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RAX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 864627..870874
location: region:864627-870874:1
so has part: feature:864627-870874:1:exon
subclass of: SO_0000010

100540252
type: Gene
SIO_000068: ncbigene

position:864627:1
position: 864627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870874:1
position: 870874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864627-870874:1:exon

RAX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RAX2
product: retina and anterior neural fold homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_010724786.3
SIO_010081: RAX2
subclass of: SO_0000673
so part of: RAX2
location: join(864627..867386,867974..868000,868801..869051,870357..870874)
location: region:864627-870874:1
so has part: feature:864627-867386:1:exon
so has part: feature:867974-868000:1:exon
so has part: feature:868801-869051:1:exon
so has part: feature:870357-870874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:864627-867386:1:exon

position:867386:1
position: 867386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:867974-868000:1:exon

position:867974:1
position: 867974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868000:1
position: 868000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:868801-869051:1:exon

position:868801:1
position: 868801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869051:1
position: 869051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:870357-870874:1:exon

position:870357:1
position: 870357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RAX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retina and anterior neural fold homeobox protein 2
translation: MFLNKCEGDLGELRKPGDGEGTPPAAAEEEQPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMKVNLPEVRVQVWFQNRRAKWRRQEKMEASSMKLHDTPMLSFNRPPMTANVGPMSNSLPLDPWLTSPISSATPVHSILGFMGAPQALQPPYGGHSFLNTPPGMAQGMQPMAPAPYQCSTPFVDKFPLEDVDQRSSSIASLRMKAKEHIQTIDKTWQPI
SIO_010081: RAX2
subclass of: SO_0000673
so part of: RAX2
location: join(868809..869051,870357..870800)
location: region:868809-870800:1
so has part: feature:868809-869051:1:exon
so has part: feature:870357-870800:1:exon

XP_010723088.1
type: Protein
SIO_000068: ncbiprotein

position:868809:1
position: 868809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870800:1
position: 870800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868809-869051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:870357-870800:1:exon

LOC100540409
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100540409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<872804..878022)
location: region:872804-878022:-1
so has part: feature:872804-878022:-1:exon
subclass of: SO_0000010

100540409
type: Gene
SIO_000068: ncbigene

position:872804:-1
position: 872804
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:878022:-1
position: 878022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:872804-878022:-1:exon

LOC100540409
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100540409
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019609942.1
SIO_010081: LOC100540409
subclass of: SO_0000673
so part of: LOC100540409
location: complement(join(<872804..872926,873006..873140,873225..873382,873585..873731,873804..873931,874286..874360,874480..874657,874782..874985,875093..875128,875198..875245,875355..875451,875554..875732,875952..876105,876182..876312,876988..877154,877262..877372,877507..877556,878011..878022))
location: region:872804-878022:-1
so has part: feature:878011-878022:-1:exon
so has part: feature:877507-877556:-1:exon
so has part: feature:877262-877372:-1:exon
so has part: feature:876988-877154:-1:exon
so has part: feature:876182-876312:-1:exon
so has part: feature:875952-876105:-1:exon
so has part: feature:875554-875732:-1:exon
so has part: feature:875355-875451:-1:exon
so has part: feature:875198-875245:-1:exon
so has part: feature:875093-875128:-1:exon
so has part: feature:874782-874985:-1:exon
so has part: feature:874480-874657:-1:exon
so has part: feature:874286-874360:-1:exon
so has part: feature:873804-873931:-1:exon
so has part: feature:873585-873731:-1:exon
so has part: feature:873225-873382:-1:exon
so has part: feature:873006-873140:-1:exon
so has part: feature:872804-872926:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878011-878022:-1:exon

position:878011:-1
position: 878011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:877507-877556:-1:exon

position:877507:-1
position: 877507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877556:-1
position: 877556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:877262-877372:-1:exon

position:877262:-1
position: 877262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877372:-1
position: 877372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:876988-877154:-1:exon

position:876988:-1
position: 876988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:877154:-1
position: 877154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:876182-876312:-1:exon

position:876182:-1
position: 876182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876312:-1
position: 876312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:875952-876105:-1:exon

position:875952:-1
position: 875952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876105:-1
position: 876105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:875554-875732:-1:exon

position:875554:-1
position: 875554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875732:-1
position: 875732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:875355-875451:-1:exon

position:875355:-1
position: 875355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875451:-1
position: 875451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:875198-875245:-1:exon

position:875198:-1
position: 875198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875245:-1
position: 875245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:875093-875128:-1:exon

position:875093:-1
position: 875093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875128:-1
position: 875128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:874782-874985:-1:exon

position:874782:-1
position: 874782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874985:-1
position: 874985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:874480-874657:-1:exon

position:874480:-1
position: 874480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874657:-1
position: 874657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:874286-874360:-1:exon

position:874286:-1
position: 874286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874360:-1
position: 874360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:873804-873931:-1:exon

position:873804:-1
position: 873804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873931:-1
position: 873931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:873585-873731:-1:exon

position:873585:-1
position: 873585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873731:-1
position: 873731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:873225-873382:-1:exon

position:873225:-1
position: 873225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873382:-1
position: 873382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:873006-873140:-1:exon

position:873006:-1
position: 873006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873140:-1
position: 873140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:872804-872926:-1:exon

position:872926:-1
position: 872926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100540409
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100540409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like
translation: MCSLKVLEPLGSPTQSLLQLLAERECSLRYLRGCLHRMGHTQACQLLNCAVHDVIRITVQPESQVVAEGTRVSLTCWASGPPGLTYQWFCGKQEVPGATAPELMVDTAAPPGLPQWYICRVSCGAAFAFSRWAHIQVERSHSPESASGYCPSMAGLQILQQPQPCHLAEGDPLVLECRALGNPPPQYQWFRNRRPVEGARGPRLQVQLVTTAERGTYSCRVFNLFHELWSQEVDVEIGPRLFASGAPWQEGDGDSPEPGSPDQLYATDKVALLVGNMHYTHHKDLRAPMVDVHALSALLRQLDFKVVSLLDLRRDEMQMAVDEFLLLLDKGVYGLLYYAGHGYENFGTSFMVPIDAPGSYTSAHCLCVQHVLQRMQQRRTGLNIFLLDMCRKRNLNDDVLPQVGALEVTANIVFGYATCADAEAYELSQGELSNGVFVTFLKRWLLEDEKITVLLDKVAEDMGTLELTRGRQALELRSNLSERRALTDPIRSLGRAETSARNLQWAKAHVLPESRHLRFDCGVTVQLGFAAEFSNIMIIYTRILATPGDITECVAKLTDLPEELDVDLKYTNRESPEELGSPLVPTWSLTCPSCCLYSRLCGLQRLRQELTFTVCLQFRYRGVADFVEERRAVSVGRPLIAKLNLSPR
SIO_010081: LOC100540409
subclass of: SO_0000673
so part of: LOC100540409
location: complement(join(<872804..872926,873006..873140,873225..873382,873585..873731,873804..873931,874286..874360,874480..874657,874782..874985,875093..875128,875198..875245,875355..875451,875554..875732,875952..876105,876182..876312,876988..877138))
location: region:872804-877138:-1
so has part: feature:876988-877138:-1:exon
so has part: feature:876182-876312:-1:exon
so has part: feature:875952-876105:-1:exon
so has part: feature:875554-875732:-1:exon
so has part: feature:875355-875451:-1:exon
so has part: feature:875198-875245:-1:exon
so has part: feature:875093-875128:-1:exon
so has part: feature:874782-874985:-1:exon
so has part: feature:874480-874657:-1:exon
so has part: feature:874286-874360:-1:exon
so has part: feature:873804-873931:-1:exon
so has part: feature:873585-873731:-1:exon
so has part: feature:873225-873382:-1:exon
so has part: feature:873006-873140:-1:exon
so has part: feature:872804-872926:-1:exon

XP_019465487.1
type: Protein
SIO_000068: ncbiprotein

position:877138:-1
position: 877138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:876988-877138:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:876182-876312:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:875952-876105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:875554-875732:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:875355-875451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:875198-875245:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:875093-875128:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:874782-874985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:874480-874657:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:874286-874360:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:873804-873931:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:873585-873731:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:873225-873382:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:873006-873140:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:872804-872926:-1:exon

MRPL54
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MRPL54
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(878015..879104)
location: region:878015-879104:-1
so has part: feature:878015-879104:-1:exon
subclass of: SO_0000010

100541949
type: Gene
SIO_000068: ncbigene

position:878015:-1
position: 878015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:879104:-1
position: 879104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:878015-879104:-1:exon

MRPL54
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MRPL54
product: mitochondrial ribosomal protein L54
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 80% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724815.2
SIO_010081: MRPL54
subclass of: SO_0000673
so part of: MRPL54
location: complement(join(878015..878278,878439..878635,879015..879104))
location: region:878015-879104:-1
so has part: feature:879015-879104:-1:exon
so has part: feature:878439-878635:-1:exon
so has part: feature:878015-878278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879015-879104:-1:exon

position:879015:-1
position: 879015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:878439-878635:-1:exon

position:878439:-1
position: 878439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878635:-1
position: 878635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:878015-878278:-1:exon

position:878278:-1
position: 878278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPL54
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MRPL54
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L54, mitochondrial
translation: MGLEPGPRSQSRSRVPTGALPRVPFPYPSRPPTLPHITVFPPPGVKVKGKSTPKEQLKGPEVCTDPVTLANYAVGVNYLKDSPEVALKPDSEYPEWLFQIYLGPPKKLEEMDPDSLEYWRRLRKYNSWQRNKLKKSRKL
SIO_010081: MRPL54
subclass of: SO_0000673
so part of: MRPL54
location: complement(join(878146..878278,878439..878635,879015..879104))
location: region:878146-879104:-1
so has part: feature:879015-879104:-1:exon
so has part: feature:878439-878635:-1:exon
so has part: feature:878146-878278:-1:exon

XP_010723117.1
type: Protein
SIO_000068: ncbiprotein

position:878146:-1
position: 878146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879015-879104:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:878439-878635:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:878146-878278:-1:exon

APBA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: APBA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 879228..884501
location: region:879228-884501:1
so has part: feature:879228-884501:1:exon
subclass of: SO_0000010

100543121
type: Gene
SIO_000068: ncbigene

position:879228:1
position: 879228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884501:1
position: 884501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879228-884501:1:exon

APBA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: APBA3
product: amyloid beta precursor protein binding family A member 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_019609994.2
SIO_010081: APBA3
subclass of: SO_0000673
so part of: APBA3
location: join(879228..880194,880452..880491,880943..881088,881191..881277,881555..881713,882003..882182,882382..882594,882816..882935,883305..883445,883586..884501)
location: region:879228-884501:1
so has part: feature:879228-880194:1:exon
so has part: feature:880452-880491:1:exon
so has part: feature:880943-881088:1:exon
so has part: feature:881191-881277:1:exon
so has part: feature:881555-881713:1:exon
so has part: feature:882003-882182:1:exon
so has part: feature:882382-882594:1:exon
so has part: feature:882816-882935:1:exon
so has part: feature:883305-883445:1:exon
so has part: feature:883586-884501:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:879228-880194:1:exon

position:880194:1
position: 880194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:880452-880491:1:exon

position:880452:1
position: 880452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880491:1
position: 880491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:880943-881088:1:exon

position:880943:1
position: 880943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881088:1
position: 881088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:881191-881277:1:exon

position:881191:1
position: 881191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881277:1
position: 881277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:881555-881713:1:exon

position:881555:1
position: 881555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881713:1
position: 881713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:882003-882182:1:exon

position:882003:1
position: 882003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882182:1
position: 882182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:882382-882594:1:exon

position:882382:1
position: 882382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882594:1
position: 882594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:882816-882935:1:exon

position:882816:1
position: 882816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882935:1
position: 882935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:883305-883445:1:exon

position:883305:1
position: 883305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883445:1
position: 883445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:883586-884501:1:exon

position:883586:1
position: 883586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APBA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: APBA3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: amyloid-beta A4 precursor protein-binding family A member 3
translation: MESTMDFQPAPDPPAMDTEEGQRGAPRPTAAEGQLEGPTFSDTAVDQQRSLEPGSGRASAMNLNSGDEQSGLCRNSGREMEEEVVTTGPQGPTDWRPSTGSTSRDTGPPRTPSSGTMELDEEPEEEPSEMQGLLAQLETLSPSLCDAPNTAPVAGKRGYAECRGECQPCPLHVATGRGLAVHPCCAQRSARSRPCHGLLFAEADREDLLNLLCYEGGXPEADTETPLTCSEVLTGTKLEMLQTPEEHSAADGLGGPDGSEEGPSSSWIYGDGLSEDKPTCEGSRDSSPEPTWAELSPAVTPEKERPPQSSVTNKESPSSCLAFKEVPGPCDPEDLLDGVIFGAKYLGSTQLVSERNPPTSVRMAQAQEAVDRIKAPEGESQPMTEVDLFVSTQRIKVLTADTQEAMMDHSLQTISYIADIGSLVVLMARRKLPRKAEAAEEKRLYKMICHVFHSADAQVIAQAIGQAFGVAYQRFLEANSIDPSELSPRQYSRALEDQEQHNAELTHFSRQENCKDVCIRKQKGEILGIAIVESGWGSILPTVVIANLMHGGPAERSGELSIGDRLMSINGTSLVGLPLTTCQNIIRELKHQTEVMLNIVHCSPVTTAVIRRPDSKYQLGFCVENGVICSLMRGGIAEKGGIRVGHRIIEINGQSVVATPHEKIIQILTQAVSEVHIKTMPASTYRLLTGQEQPVFL
SIO_010081: APBA3
subclass of: SO_0000673
so part of: APBA3
location: join(879260..880194,880452..880491,880943..881088,881191..881277,881555..881713,882003..882182,882382..882594,882816..882935,883305..883445,883586..883657)
location: region:879260-883657:1
so has part: feature:879260-880194:1:exon
so has part: feature:880452-880491:1:exon
so has part: feature:880943-881088:1:exon
so has part: feature:881191-881277:1:exon
so has part: feature:881555-881713:1:exon
so has part: feature:882003-882182:1:exon
so has part: feature:882382-882594:1:exon
so has part: feature:882816-882935:1:exon
so has part: feature:883305-883445:1:exon
so has part: feature:883586-883657:1:exon

XP_019465539.1
type: Protein
SIO_000068: ncbiprotein

position:879260:1
position: 879260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883657:1
position: 883657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:879260-880194:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:880452-880491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:880943-881088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:881191-881277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:881555-881713:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:882003-882182:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:882382-882594:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:882816-882935:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:883305-883445:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:883586-883657:1:exon

TJP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TJP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(884739..896678)
location: region:884739-896678:-1
so has part: feature:884739-896678:-1:exon
subclass of: SO_0000010

100543275
type: Gene
SIO_000068: ncbigene

position:884739:-1
position: 884739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896678:-1
position: 896678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884739-896678:-1:exon

TJP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TJP3
product: tight junction protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019609993.1
SIO_010081: TJP3
subclass of: SO_0000673
so part of: TJP3
location: complement(join(884739..885067,885175..885221,885424..885648,885747..886058,886145..886215,886498..886593,886687..886883,887186..887405,887837..887945,888304..888460,888595..888673,888835..888899,889104..889194,889283..889445,889966..890069,890343..890808,891019..891121,891237..891361,891439..891627,896161..896281,896659..896678))
location: region:884739-896678:-1
so has part: feature:896659-896678:-1:exon
so has part: feature:896161-896281:-1:exon
so has part: feature:891439-891627:-1:exon
so has part: feature:891237-891361:-1:exon
so has part: feature:891019-891121:-1:exon
so has part: feature:890343-890808:-1:exon
so has part: feature:889966-890069:-1:exon
so has part: feature:889283-889445:-1:exon
so has part: feature:889104-889194:-1:exon
so has part: feature:888835-888899:-1:exon
so has part: feature:888595-888673:-1:exon
so has part: feature:888304-888460:-1:exon
so has part: feature:887837-887945:-1:exon
so has part: feature:887186-887405:-1:exon
so has part: feature:886687-886883:-1:exon
so has part: feature:886498-886593:-1:exon
so has part: feature:886145-886215:-1:exon
so has part: feature:885747-886058:-1:exon
so has part: feature:885424-885648:-1:exon
so has part: feature:885175-885221:-1:exon
so has part: feature:884739-885067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896659-896678:-1:exon

position:896659:-1
position: 896659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:896161-896281:-1:exon

position:896161:-1
position: 896161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896281:-1
position: 896281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891439-891627:-1:exon

position:891439:-1
position: 891439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891627:-1
position: 891627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:891237-891361:-1:exon

position:891237:-1
position: 891237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891361:-1
position: 891361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:891019-891121:-1:exon

position:891019:-1
position: 891019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891121:-1
position: 891121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:890343-890808:-1:exon

position:890343:-1
position: 890343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890808:-1
position: 890808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:889966-890069:-1:exon

position:889966:-1
position: 889966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890069:-1
position: 890069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:889283-889445:-1:exon

position:889283:-1
position: 889283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889445:-1
position: 889445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:889104-889194:-1:exon

position:889104:-1
position: 889104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889194:-1
position: 889194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:888835-888899:-1:exon

position:888835:-1
position: 888835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888899:-1
position: 888899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:888595-888673:-1:exon

position:888595:-1
position: 888595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888673:-1
position: 888673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:888304-888460:-1:exon

position:888304:-1
position: 888304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888460:-1
position: 888460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:887837-887945:-1:exon

position:887837:-1
position: 887837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887945:-1
position: 887945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:887186-887405:-1:exon

position:887186:-1
position: 887186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887405:-1
position: 887405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:886687-886883:-1:exon

position:886687:-1
position: 886687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886883:-1
position: 886883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:886498-886593:-1:exon

position:886498:-1
position: 886498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886593:-1
position: 886593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:886145-886215:-1:exon

position:886145:-1
position: 886145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886215:-1
position: 886215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:885747-886058:-1:exon

position:885747:-1
position: 885747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886058:-1
position: 886058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:885424-885648:-1:exon

position:885424:-1
position: 885424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885648:-1
position: 885648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:885175-885221:-1:exon

position:885175:-1
position: 885175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885221:-1
position: 885221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:884739-885067:-1:exon

position:885067:-1
position: 885067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TJP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TJP3
product: tight junction protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_010724791.3
SIO_010081: TJP3
subclass of: SO_0000673
so part of: TJP3
location: complement(join(884739..885067,885175..885221,885424..885648,885747..886058,886145..886215,886498..886593,886687..886883,887186..887405,887837..887945,888304..888460,888595..888673,888835..888899,889104..889194,889283..889445,889966..890069,890343..890808,891019..891121,891237..891361,891439..891495,896161..896241))
location: region:884739-896241:-1
so has part: feature:896161-896241:-1:exon
so has part: feature:891439-891495:-1:exon
so has part: feature:891237-891361:-1:exon
so has part: feature:891019-891121:-1:exon
so has part: feature:890343-890808:-1:exon
so has part: feature:889966-890069:-1:exon
so has part: feature:889283-889445:-1:exon
so has part: feature:889104-889194:-1:exon
so has part: feature:888835-888899:-1:exon
so has part: feature:888595-888673:-1:exon
so has part: feature:888304-888460:-1:exon
so has part: feature:887837-887945:-1:exon
so has part: feature:887186-887405:-1:exon
so has part: feature:886687-886883:-1:exon
so has part: feature:886498-886593:-1:exon
so has part: feature:886145-886215:-1:exon
so has part: feature:885747-886058:-1:exon
so has part: feature:885424-885648:-1:exon
so has part: feature:885175-885221:-1:exon
so has part: feature:884739-885067:-1:exon

position:896241:-1
position: 896241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896161-896241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891439-891495:-1:exon

position:891495:-1
position: 891495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:891237-891361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891019-891121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890343-890808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889966-890069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889283-889445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889104-889194:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888835-888899:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888595-888673:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888304-888460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887837-887945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887186-887405:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886687-886883:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886498-886593:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:886145-886215:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885747-886058:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:885424-885648:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:885175-885221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:884739-885067:-1:exon

TJP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TJP3
product: tight junction protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_010724790.2
SIO_010081: TJP3
subclass of: SO_0000673
so part of: TJP3
location: complement(join(884739..885067,885175..885221,885424..885648,885747..886058,886145..886215,886498..886593,886687..886883,887186..887405,887837..887945,888304..888460,888595..888673,888835..888899,889104..889194,889283..889445,889966..890069,890343..890808,891019..891121,891237..891361,891439..891495,892389..892441))
location: region:884739-892441:-1
so has part: feature:892389-892441:-1:exon
so has part: feature:891439-891495:-1:exon
so has part: feature:891237-891361:-1:exon
so has part: feature:891019-891121:-1:exon
so has part: feature:890343-890808:-1:exon
so has part: feature:889966-890069:-1:exon
so has part: feature:889283-889445:-1:exon
so has part: feature:889104-889194:-1:exon
so has part: feature:888835-888899:-1:exon
so has part: feature:888595-888673:-1:exon
so has part: feature:888304-888460:-1:exon
so has part: feature:887837-887945:-1:exon
so has part: feature:887186-887405:-1:exon
so has part: feature:886687-886883:-1:exon
so has part: feature:886498-886593:-1:exon
so has part: feature:886145-886215:-1:exon
so has part: feature:885747-886058:-1:exon
so has part: feature:885424-885648:-1:exon
so has part: feature:885175-885221:-1:exon
so has part: feature:884739-885067:-1:exon

position:892441:-1
position: 892441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892389-892441:-1:exon

position:892389:-1
position: 892389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891439-891495:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891237-891361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891019-891121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890343-890808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889966-890069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889283-889445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889104-889194:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888835-888899:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888595-888673:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888304-888460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887837-887945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887186-887405:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886687-886883:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886498-886593:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:886145-886215:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885747-886058:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:885424-885648:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:885175-885221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:884739-885067:-1:exon

TJP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TJP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-3 isoform X1
translation: MAVRFQVAAMEEMLIWEQHTVTLSKDPHRGFGFAVSGGRDRPNRVTGDTAVIVSDVVSRGPAFGQLQRKDQIVMVNGLSMENVSSSFAIQTLKTCGKIANITLKRQKKIHLPMSKSSPASPAATRRYDSDEDFDPRGVDPALRSASQHRSRDDLDHNQGYDGDSSSERSSGHHQDDRRHHKSSRSRRRSQDSSHWRQSPDSGSEHRGYSRHRSANGFGHEGDTNGLALVSGFKRLPHRDVPMKPITSVLVKKKEDEEYGLKLGSQLFIKHIVESGLAARRSSLQEGDLILKINGVASKDMSLADTQRLIEQTEGILTLLVLRDHRQFLINIPNMEDYQSDSSRMDDISDIDSDLSHPPSPKTSPRLPAAARMNSPGERRQSSKNAAINTNMDDALSHDMLEAVEQDGHHSPHSRPSARAAPKDGYSPDSRVVQFVKARSVGLQLAGGNDVGIFVSGVQEGSPADSQGIEEGDQILQVNGTSFQNLTREEAVQYLMKLPPGEDVTLWIQSKQNIYRKMISSNVRDSFYIRTHFDYEKDTPSGLSFARGDVFHVLDTMYRGKLGNWLAVRMGRDLQEQEKGIIPNQSRAEQFASLESVLKTTPGTNPSGARAEFWKLRGLRGAKKTLRKSREDLSALTKQGHYPPYERVVLKEASFKRPVVILGPITDIAMQKLSMEQPELFEIAPSVPRDGASSKVIKLDSVRQIAEKDKHALLDITPSAVERLNYVQYYPVVVFCEPESRQGIKAMRQWLAPDSRKSSRRLYAQASKMKKYCSHLFTATITLSGSGNAWYEEIKNIIRTQQSQPIWTAAEHVDAALEDGLELLNPPSRAASGYLTCDSHANSDYDDTDGEGGAYTDGEAEDAYSHPALSRSSEPAQTYPSHGVSEQVTDQQPQGQWAQEHLRDYEHEAVRKRFTRARDDSDEDEGYEWGPATDV
SIO_010081: TJP3
subclass of: SO_0000673
so part of: TJP3
location: complement(join(884968..885067,885175..885221,885424..885648,885747..886058,886145..886215,886498..886593,886687..886883,887186..887405,887837..887945,888304..888460,888595..888673,888835..888899,889104..889194,889283..889445,889966..890069,890343..890808,891019..891121,891237..891361,891439..891495,892389..892406))
location: region:884968-892406:-1
so has part: feature:892389-892406:-1:exon
so has part: feature:891439-891495:-1:exon
so has part: feature:891237-891361:-1:exon
so has part: feature:891019-891121:-1:exon
so has part: feature:890343-890808:-1:exon
so has part: feature:889966-890069:-1:exon
so has part: feature:889283-889445:-1:exon
so has part: feature:889104-889194:-1:exon
so has part: feature:888835-888899:-1:exon
so has part: feature:888595-888673:-1:exon
so has part: feature:888304-888460:-1:exon
so has part: feature:887837-887945:-1:exon
so has part: feature:887186-887405:-1:exon
so has part: feature:886687-886883:-1:exon
so has part: feature:886498-886593:-1:exon
so has part: feature:886145-886215:-1:exon
so has part: feature:885747-886058:-1:exon
so has part: feature:885424-885648:-1:exon
so has part: feature:885175-885221:-1:exon
so has part: feature:884968-885067:-1:exon

XP_010723092.1
type: Protein
SIO_000068: ncbiprotein

position:884968:-1
position: 884968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892406:-1
position: 892406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:892389-892406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891439-891495:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891237-891361:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891019-891121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:890343-890808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889966-890069:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889283-889445:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:889104-889194:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888835-888899:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888595-888673:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888304-888460:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887837-887945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887186-887405:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886687-886883:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886498-886593:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:886145-886215:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885747-886058:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:885424-885648:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:885175-885221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:884968-885067:-1:exon

TJP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TJP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-3 isoform X2
translation: MEEMLIWEQHTVTLSKDPHRGFGFAVSGGRDRPNRVTGDTAVIVSDVVSRGPAFGQLQRKDQIVMVNGLSMENVSSSFAIQTLKTCGKIANITLKRQKKIHLPMSKSSPASPAATRRYDSDEDFDPRGVDPALRSASQHRSRDDLDHNQGYDGDSSSERSSGHHQDDRRHHKSSRSRRRSQDSSHWRQSPDSGSEHRGYSRHRSANGFGHEGDTNGLALVSGFKRLPHRDVPMKPITSVLVKKKEDEEYGLKLGSQLFIKHIVESGLAARRSSLQEGDLILKINGVASKDMSLADTQRLIEQTEGILTLLVLRDHRQFLINIPNMEDYQSDSSRMDDISDIDSDLSHPPSPKTSPRLPAAARMNSPGERRQSSKNAAINTNMDDALSHDMLEAVEQDGHHSPHSRPSARAAPKDGYSPDSRVVQFVKARSVGLQLAGGNDVGIFVSGVQEGSPADSQGIEEGDQILQVNGTSFQNLTREEAVQYLMKLPPGEDVTLWIQSKQNIYRKMISSNVRDSFYIRTHFDYEKDTPSGLSFARGDVFHVLDTMYRGKLGNWLAVRMGRDLQEQEKGIIPNQSRAEQFASLESVLKTTPGTNPSGARAEFWKLRGLRGAKKTLRKSREDLSALTKQGHYPPYERVVLKEASFKRPVVILGPITDIAMQKLSMEQPELFEIAPSVPRDGASSKVIKLDSVRQIAEKDKHALLDITPSAVERLNYVQYYPVVVFCEPESRQGIKAMRQWLAPDSRKSSRRLYAQASKMKKYCSHLFTATITLSGSGNAWYEEIKNIIRTQQSQPIWTAAEHVDAALEDGLELLNPPSRAASGYLTCDSHANSDYDDTDGEGGAYTDGEAEDAYSHPALSRSSEPAQTYPSHGVSEQVTDQQPQGQWAQEHLRDYEHEAVRKRFTRARDDSDEDEGYEWGPATDV
SIO_010081: TJP3
subclass of: SO_0000673
so part of: TJP3
location: complement(join(884968..885067,885175..885221,885424..885648,885747..886058,886145..886215,886498..886593,886687..886883,887186..887405,887837..887945,888304..888460,888595..888673,888835..888899,889104..889194,889283..889445,889966..890069,890343..890808,891019..891121,891237..891361,891439..891486))
location: region:884968-891486:-1
so has part: feature:891439-891486:-1:exon
so has part: feature:891237-891361:-1:exon
so has part: feature:891019-891121:-1:exon
so has part: feature:890343-890808:-1:exon
so has part: feature:889966-890069:-1:exon
so has part: feature:889283-889445:-1:exon
so has part: feature:889104-889194:-1:exon
so has part: feature:888835-888899:-1:exon
so has part: feature:888595-888673:-1:exon
so has part: feature:888304-888460:-1:exon
so has part: feature:887837-887945:-1:exon
so has part: feature:887186-887405:-1:exon
so has part: feature:886687-886883:-1:exon
so has part: feature:886498-886593:-1:exon
so has part: feature:886145-886215:-1:exon
so has part: feature:885747-886058:-1:exon
so has part: feature:885424-885648:-1:exon
so has part: feature:885175-885221:-1:exon
so has part: feature:884968-885067:-1:exon

XP_019465538.1
type: Protein
SIO_000068: ncbiprotein

position:891486:-1
position: 891486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891439-891486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891237-891361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891019-891121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890343-890808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889966-890069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889283-889445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889104-889194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:888835-888899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888595-888673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888304-888460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:887837-887945:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887186-887405:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:886687-886883:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886498-886593:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886145-886215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885747-886058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885424-885648:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:885175-885221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:884968-885067:-1:exon

TJP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TJP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tight junction protein ZO-3 isoform X2
translation: MEEMLIWEQHTVTLSKDPHRGFGFAVSGGRDRPNRVTGDTAVIVSDVVSRGPAFGQLQRKDQIVMVNGLSMENVSSSFAIQTLKTCGKIANITLKRQKKIHLPMSKSSPASPAATRRYDSDEDFDPRGVDPALRSASQHRSRDDLDHNQGYDGDSSSERSSGHHQDDRRHHKSSRSRRRSQDSSHWRQSPDSGSEHRGYSRHRSANGFGHEGDTNGLALVSGFKRLPHRDVPMKPITSVLVKKKEDEEYGLKLGSQLFIKHIVESGLAARRSSLQEGDLILKINGVASKDMSLADTQRLIEQTEGILTLLVLRDHRQFLINIPNMEDYQSDSSRMDDISDIDSDLSHPPSPKTSPRLPAAARMNSPGERRQSSKNAAINTNMDDALSHDMLEAVEQDGHHSPHSRPSARAAPKDGYSPDSRVVQFVKARSVGLQLAGGNDVGIFVSGVQEGSPADSQGIEEGDQILQVNGTSFQNLTREEAVQYLMKLPPGEDVTLWIQSKQNIYRKMISSNVRDSFYIRTHFDYEKDTPSGLSFARGDVFHVLDTMYRGKLGNWLAVRMGRDLQEQEKGIIPNQSRAEQFASLESVLKTTPGTNPSGARAEFWKLRGLRGAKKTLRKSREDLSALTKQGHYPPYERVVLKEASFKRPVVILGPITDIAMQKLSMEQPELFEIAPSVPRDGASSKVIKLDSVRQIAEKDKHALLDITPSAVERLNYVQYYPVVVFCEPESRQGIKAMRQWLAPDSRKSSRRLYAQASKMKKYCSHLFTATITLSGSGNAWYEEIKNIIRTQQSQPIWTAAEHVDAALEDGLELLNPPSRAASGYLTCDSHANSDYDDTDGEGGAYTDGEAEDAYSHPALSRSSEPAQTYPSHGVSEQVTDQQPQGQWAQEHLRDYEHEAVRKRFTRARDDSDEDEGYEWGPATDV
SIO_010081: TJP3
subclass of: SO_0000673
so part of: TJP3
location: complement(join(884968..885067,885175..885221,885424..885648,885747..886058,886145..886215,886498..886593,886687..886883,887186..887405,887837..887945,888304..888460,888595..888673,888835..888899,889104..889194,889283..889445,889966..890069,890343..890808,891019..891121,891237..891361,891439..891486))
location: region:884968-891486:-1
so has part: feature:891439-891486:-1:exon
so has part: feature:891237-891361:-1:exon
so has part: feature:891019-891121:-1:exon
so has part: feature:890343-890808:-1:exon
so has part: feature:889966-890069:-1:exon
so has part: feature:889283-889445:-1:exon
so has part: feature:889104-889194:-1:exon
so has part: feature:888835-888899:-1:exon
so has part: feature:888595-888673:-1:exon
so has part: feature:888304-888460:-1:exon
so has part: feature:887837-887945:-1:exon
so has part: feature:887186-887405:-1:exon
so has part: feature:886687-886883:-1:exon
so has part: feature:886498-886593:-1:exon
so has part: feature:886145-886215:-1:exon
so has part: feature:885747-886058:-1:exon
so has part: feature:885424-885648:-1:exon
so has part: feature:885175-885221:-1:exon
so has part: feature:884968-885067:-1:exon

XP_010723093.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:891439-891486:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:891237-891361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891019-891121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:890343-890808:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:889966-890069:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:889283-889445:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:889104-889194:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:888835-888899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:888595-888673:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888304-888460:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:887837-887945:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887186-887405:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:886687-886883:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:886498-886593:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:886145-886215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:885747-886058:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:885424-885648:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:885175-885221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:884968-885067:-1:exon

PIP5K1C
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PIP5K1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 896137..929139
location: region:896137-929139:1
so has part: feature:896137-929139:1:exon
subclass of: SO_0000010

100543434
type: Gene
SIO_000068: ncbigene

position:896137:1
position: 896137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929139:1
position: 929139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896137-929139:1:exon

PIP5K1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PIP5K1C
product: phosphatidylinositol-4-phosphate 5-kinase type 1 gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031557076.1
SIO_010081: PIP5K1C
subclass of: SO_0000673
so part of: PIP5K1C
location: join(896137..896217,897239..897344,910222..910253,911838..911915,912240..912370,912961..913078,914882..915034,916351..916650,917311..917516,918310..918393,918905..918953,919935..920019,920286..920447,921357..921495,921776..921808,923862..923966,924209..924341,928263..928346,928732..929139)
location: region:896137-929139:1
so has part: feature:896137-896217:1:exon
so has part: feature:897239-897344:1:exon
so has part: feature:910222-910253:1:exon
so has part: feature:911838-911915:1:exon
so has part: feature:912240-912370:1:exon
so has part: feature:912961-913078:1:exon
so has part: feature:914882-915034:1:exon
so has part: feature:916351-916650:1:exon
so has part: feature:917311-917516:1:exon
so has part: feature:918310-918393:1:exon
so has part: feature:918905-918953:1:exon
so has part: feature:919935-920019:1:exon
so has part: feature:920286-920447:1:exon
so has part: feature:921357-921495:1:exon
so has part: feature:921776-921808:1:exon
so has part: feature:923862-923966:1:exon
so has part: feature:924209-924341:1:exon
so has part: feature:928263-928346:1:exon
so has part: feature:928732-929139:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:896137-896217:1:exon

position:896217:1
position: 896217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:897239-897344:1:exon

position:897239:1
position: 897239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897344:1
position: 897344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:910222-910253:1:exon

position:910222:1
position: 910222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910253:1
position: 910253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:911838-911915:1:exon

position:911838:1
position: 911838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911915:1
position: 911915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:912240-912370:1:exon

position:912240:1
position: 912240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912370:1
position: 912370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:912961-913078:1:exon

position:912961:1
position: 912961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913078:1
position: 913078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:914882-915034:1:exon

position:914882:1
position: 914882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915034:1
position: 915034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:916351-916650:1:exon

position:916351:1
position: 916351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916650:1
position: 916650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:917311-917516:1:exon

position:917311:1
position: 917311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917516:1
position: 917516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:918310-918393:1:exon

position:918310:1
position: 918310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918393:1
position: 918393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:918905-918953:1:exon

position:918905:1
position: 918905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918953:1
position: 918953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:919935-920019:1:exon

position:919935:1
position: 919935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920019:1
position: 920019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:920286-920447:1:exon

position:920286:1
position: 920286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920447:1
position: 920447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:921357-921495:1:exon

position:921357:1
position: 921357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921495:1
position: 921495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:921776-921808:1:exon

position:921776:1
position: 921776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921808:1
position: 921808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:923862-923966:1:exon

position:923862:1
position: 923862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923966:1
position: 923966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:924209-924341:1:exon

position:924209:1
position: 924209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924341:1
position: 924341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:928263-928346:1:exon

position:928263:1
position: 928263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928346:1
position: 928346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:928732-929139:1:exon

position:928732:1
position: 928732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIP5K1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PIP5K1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 5-kinase type-1 gamma
translation: MFQFPSTHRVVARPPRLNLTRKELSARAPLPWQRPGSAAIATLRPRPLRPGTAGAALSPPLYGLAPKKAAITEGPGQPGQGKKIGHRSVDASGETTYKKTTSSTLKGAIQLGIGYTVGNLSSKPERDVLMQDFYVVESIFFPSEGSNLTPAHHYADFRFKTYAPVAFRYFRELFGIRPDDYLYSLCNEPLIELSNPGASGSLFYVTSDDEFIIKTVMHKEAEFLQKLLPGYYMNLNQNPRTLLPKFYGLYCVQSGGKNIRVVVMNNILPRVVKMHLKFDLKGSTYKRRASKKEKEKSSPTYKDLDFIQDMPEGLMLDADTFSALVKTLQRDCLVLESFKIMDYSLLLGVHNIDQQERERQSEGAHSTSDEKRPVGQKALYSTAMESIQGGAARGESIDTDDTMGGIPAVNGKGERLLLHVGIIDILQSYRFIKKLEHTWKALVHDGDTVSVHRPSFYAERFFKFMTNTVFRKNSSLKSSPSKKGRSALLAVKTSGPTAAFSASQLPSEKDETQYDLRAARSYPTLDDEGRPDLLPCTPPSFEEATTASIATTLSSTSLSVPERSPSETSEQPRYRRRTHSSGQDGRSHEEVRVEEELQQISVELEPKCDVEIVAPEEDDKEEAASSACAIVMSTATIEVETASQASEPASQASDEDDVPVTDIYFPTDERSWVYSPLHYSAQLHSVSDEESDT
SIO_010081: PIP5K1C
subclass of: SO_0000673
so part of: PIP5K1C
location: join(896137..896217,897239..897344,910222..910253,911838..911915,912240..912370,912961..913078,914882..915034,916351..916650,917311..917516,918310..918393,918905..918953,919935..920019,920286..920447,921357..921495,921776..921808,923862..923966,924209..924341,928263..928346,928732..928734)
location: region:896137-928734:1
so has part: feature:896137-896217:1:exon
so has part: feature:897239-897344:1:exon
so has part: feature:910222-910253:1:exon
so has part: feature:911838-911915:1:exon
so has part: feature:912240-912370:1:exon
so has part: feature:912961-913078:1:exon
so has part: feature:914882-915034:1:exon
so has part: feature:916351-916650:1:exon
so has part: feature:917311-917516:1:exon
so has part: feature:918310-918393:1:exon
so has part: feature:918905-918953:1:exon
so has part: feature:919935-920019:1:exon
so has part: feature:920286-920447:1:exon
so has part: feature:921357-921495:1:exon
so has part: feature:921776-921808:1:exon
so has part: feature:923862-923966:1:exon
so has part: feature:924209-924341:1:exon
so has part: feature:928263-928346:1:exon
so has part: feature:928732-928734:1:exon

XP_031412936.1
type: Protein
SIO_000068: ncbiprotein

position:928734:1
position: 928734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:896137-896217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:897239-897344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910222-910253:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911838-911915:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912240-912370:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:912961-913078:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:914882-915034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:916351-916650:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:917311-917516:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:918310-918393:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:918905-918953:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:919935-920019:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:920286-920447:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:921357-921495:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:921776-921808:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:923862-923966:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:924209-924341:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:928263-928346:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:928732-928734:1:exon

CACTIN
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CACTIN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <932461..936589
location: region:932461-936589:1
so has part: feature:932461-936589:1:exon
subclass of: SO_0000010

100543588
type: Gene
SIO_000068: ncbigene

position:932461:1
position: 932461
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:936589:1
position: 936589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932461-936589:1:exon

CACTIN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CACTIN
product: cactin, spliceosome C complex subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010724792.3
SIO_010081: CACTIN
subclass of: SO_0000673
so part of: CACTIN
location: join(<932461..932955,933479..933574,933971..934116,934200..934362,934460..934577,934781..934973,935078..935200,935327..935595,935979..936589)
location: region:932461-936589:1
so has part: feature:932461-932955:1:exon
so has part: feature:933479-933574:1:exon
so has part: feature:933971-934116:1:exon
so has part: feature:934200-934362:1:exon
so has part: feature:934460-934577:1:exon
so has part: feature:934781-934973:1:exon
so has part: feature:935078-935200:1:exon
so has part: feature:935327-935595:1:exon
so has part: feature:935979-936589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:932461-932955:1:exon

position:932955:1
position: 932955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:933479-933574:1:exon

position:933479:1
position: 933479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933574:1
position: 933574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:933971-934116:1:exon

position:933971:1
position: 933971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934116:1
position: 934116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:934200-934362:1:exon

position:934200:1
position: 934200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934362:1
position: 934362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:934460-934577:1:exon

position:934460:1
position: 934460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934577:1
position: 934577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:934781-934973:1:exon

position:934781:1
position: 934781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934973:1
position: 934973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:935078-935200:1:exon

position:935078:1
position: 935078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935200:1
position: 935200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:935327-935595:1:exon

position:935327:1
position: 935327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935595:1
position: 935595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:935979-936589:1:exon

position:935979:1
position: 935979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CACTIN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CACTIN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cactin
translation: ISPPSSDSDNERQKRKKKNKSRDQHHKSQRKHRSRSRGRSSDSSAERDRRRARSRDRRRRRAGSKSSVSSVSSPSPPRSRGQEESGQQLSLQERLRMKEEKKKQAALMKALETPEEKRARRLAKKEAKERKKREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWSKALEKKGISHLDEKDLKERNKRIQEDNRLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRIRDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVSDMEDLVEDIQVYMELEQGKNVDFWRDMTIITEDEIAKLRKLEASGKGGPGERRDGVNASVSSDVQSVFKGKTYNQLQVLYQGIESKIRAGGPNLDIGYWESLLQQLKAYMARARLRERHQDVLRQKLYKLKQEQGVESEPLFPIIKREPASPSDRLDAEESIVVQPGPSSEPEAEQDVEVKEEAEGEAVLMEEDLIQQSLDDYDAGKYSPRLLGTNELPFDAHVLEAEEDAHRLLLLRQQLQVTGNATESADDIFFRKAKEGMGADEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQTHYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACQDNKDFAILRFHAGPPYEDIAFKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR
SIO_010081: CACTIN
subclass of: SO_0000673
so part of: CACTIN
location: join(<932461..932955,933479..933574,933971..934116,934200..934362,934460..934577,934781..934973,935078..935200,935327..935595,935979..936469)
location: region:932461-936469:1
so has part: feature:932461-932955:1:exon
so has part: feature:933479-933574:1:exon
so has part: feature:933971-934116:1:exon
so has part: feature:934200-934362:1:exon
so has part: feature:934460-934577:1:exon
so has part: feature:934781-934973:1:exon
so has part: feature:935078-935200:1:exon
so has part: feature:935327-935595:1:exon
so has part: feature:935979-936469:1:exon

XP_010723094.2
type: Protein
SIO_000068: ncbiprotein

position:936469:1
position: 936469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932461-932955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:933479-933574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:933971-934116:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:934200-934362:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:934460-934577:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:934781-934973:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:935078-935200:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:935327-935595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:935979-936469:1:exon

TBXA2R
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TBXA2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 938309..943410
location: region:938309-943410:1
so has part: feature:938309-943410:1:exon
subclass of: SO_0000010

100543742
type: Gene
SIO_000068: ncbigene

position:938309:1
position: 938309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943410:1
position: 943410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:938309-943410:1:exon

TBXA2R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TBXA2R
product: thromboxane A2 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 219 samples with support for all annotated introns
transcript id: XM_010724793.2
SIO_010081: TBXA2R
subclass of: SO_0000673
so part of: TBXA2R
location: join(938309..941198,942900..943410)
location: region:938309-943410:1
so has part: feature:938309-941198:1:exon
so has part: feature:942900-943410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:938309-941198:1:exon

position:941198:1
position: 941198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:942900-943410:1:exon

position:942900:1
position: 942900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TBXA2R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TBXA2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thromboxane A2 receptor
translation: MGDPTSAGSGWVTCVRVRISIKVRARVSVGLRITIRVRVLVPNAPLTPQSPVGSAPAPRTRHGAQFGGRLRPPGWGWGDTEPPNVSLASQPHTCFGVVNLSLSLNVTQPKAIASPWFSTAFGLIGLCSNLFALYVLLSSSRQLSSRSRSSFLVFLCGLVVTDFMGLLVTAAVIIPYHFTKFNWAQVDPGCHLCNFLGFSMVFFGQCPLLLGATMAGERFVGINRPFSRSTSVSKRRAWAIVAAVWGFSCALGLLPVLGLGRYTLQYPGSWCFLTLLPDTGNVVFCLLFALLGVCSVLLSFVFNTVSVVTLCRVYHDRESVQRRRDSEVEMMVQLVGIMVIATICWMPLLIFIIQTTLQQLRTGDPLPMLPGQTQQLLLIYIRMVTWNQILDPWVYILFRRAVLQRLHPGLRTRPSLLSLYPVLNPSLRRKLTQEGRLQ
SIO_010081: TBXA2R
subclass of: SO_0000673
so part of: TBXA2R
location: join(940152..941198,942900..943169)
location: region:940152-943169:1
so has part: feature:940152-941198:1:exon
so has part: feature:942900-943169:1:exon

XP_010723095.1
type: Protein
SIO_000068: ncbiprotein

position:940152:1
position: 940152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943169:1
position: 943169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:940152-941198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:942900-943169:1:exon

GIPC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GIPC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(943264..>946415)
location: region:943264-946415:-1
so has part: feature:943264-946415:-1:exon
subclass of: SO_0000010

100542257
type: Gene
SIO_000068: ncbigene

position:943264:-1
position: 943264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946415:-1
position: 946415
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:943264-946415:-1:exon

GIPC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GIPC3
product: GIPC PDZ domain containing family member 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031557077.1
SIO_010081: GIPC3
subclass of: SO_0000673
so part of: GIPC3
location: complement(join(943264..943283,943895..944032,944107..944188,944277..944392,945048..945228,945377..945562,945639..>946415))
location: region:943264-946415:-1
so has part: feature:945639-946415:-1:exon
so has part: feature:945377-945562:-1:exon
so has part: feature:945048-945228:-1:exon
so has part: feature:944277-944392:-1:exon
so has part: feature:944107-944188:-1:exon
so has part: feature:943895-944032:-1:exon
so has part: feature:943264-943283:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945639-946415:-1:exon

position:945639:-1
position: 945639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:945377-945562:-1:exon

position:945377:-1
position: 945377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945562:-1
position: 945562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:945048-945228:-1:exon

position:945048:-1
position: 945048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945228:-1
position: 945228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:944277-944392:-1:exon

position:944277:-1
position: 944277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944392:-1
position: 944392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:944107-944188:-1:exon

position:944107:-1
position: 944107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944188:-1
position: 944188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:943895-944032:-1:exon

position:943895:-1
position: 943895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944032:-1
position: 944032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:943264-943283:-1:exon

position:943283:-1
position: 943283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GIPC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GIPC3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 3 codons; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(946320..946322),aa:OTHER)
transl except: (pos:complement(946253..946255),aa:OTHER)
product: LOW QUALITY PROTEIN: PDZ domain-containing protein GIPC3
translation: PFSLACKVGALSVEKSPGCHLVAAGLGWRWEXINXGRKKPQHFGVGAFVLXGGLXSSSGCSLSSFHNPVLYLGVLSPFILVSSRPLSSCLWLTALCRPMTLSVTALSSSFPPHPHIQDAATALRGTAHPISGTDPCIRSGSQPRDHLTGXPIHNSAPAARCGGRAGAAGRPRRNAPWRTAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRARPRLVFRTQLAHGSPTGRIEGFTNVKELYGKIAEVFSISPTEILFCTLNTHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVTKTEDALGLTITDNGAGYAFIKRIKEGSIINRIQTVSVGDSIEAINDHTIVGCRHYEVARMLRELPRAQPFTLRLVQPKKAFDMIGQRTRSSSKCPPEGRVSSGKETLRLRAQGPATLQEGPSTVEEEAARRVDDLLESYMGIRDCELAATMVEMAKCSPAAAALACALDSVLGEFAFPQEFVAEVWAAVCSPRAPAAAR
SIO_010081: GIPC3
subclass of: SO_0000673
so part of: GIPC3
location: complement(join(943264..943283,943895..944032,944107..944188,944277..944392,945048..945228,945377..945562,945639..>946415))
location: region:943264-946415:-1
so has part: feature:945639-946415:-1:exon
so has part: feature:945377-945562:-1:exon
so has part: feature:945048-945228:-1:exon
so has part: feature:944277-944392:-1:exon
so has part: feature:944107-944188:-1:exon
so has part: feature:943895-944032:-1:exon
so has part: feature:943264-943283:-1:exon

XP_031412937.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:945639-946415:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:945377-945562:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:945048-945228:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:944277-944392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:944107-944188:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:943895-944032:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:943264-943283:-1:exon

HMG20B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HMG20B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(946294..950965)
location: region:946294-950965:-1
so has part: feature:946294-950965:-1:exon
subclass of: SO_0000010

100543899
type: Gene
SIO_000068: ncbigene

position:946294:-1
position: 946294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950965:-1
position: 950965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946294-950965:-1:exon

HMG20B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HMG20B
product: high mobility group 20B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_019610000.2
SIO_010081: HMG20B
subclass of: SO_0000673
so part of: HMG20B
location: complement(join(946294..946984,947098..947230,947535..947750,947825..947900,948152..948204,948307..948427,948700..948903,949111..949216,950231..950297,950941..950965))
location: region:946294-950965:-1
so has part: feature:950941-950965:-1:exon
so has part: feature:950231-950297:-1:exon
so has part: feature:949111-949216:-1:exon
so has part: feature:948700-948903:-1:exon
so has part: feature:948307-948427:-1:exon
so has part: feature:948152-948204:-1:exon
so has part: feature:947825-947900:-1:exon
so has part: feature:947535-947750:-1:exon
so has part: feature:947098-947230:-1:exon
so has part: feature:946294-946984:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950941-950965:-1:exon

position:950941:-1
position: 950941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950231-950297:-1:exon

position:950231:-1
position: 950231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950297:-1
position: 950297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:949111-949216:-1:exon

position:949111:-1
position: 949111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:949216:-1
position: 949216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:948700-948903:-1:exon

position:948700:-1
position: 948700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948903:-1
position: 948903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:948307-948427:-1:exon

position:948307:-1
position: 948307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948427:-1
position: 948427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:948152-948204:-1:exon

position:948152:-1
position: 948152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:948204:-1
position: 948204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:947825-947900:-1:exon

position:947825:-1
position: 947825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947900:-1
position: 947900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:947535-947750:-1:exon

position:947535:-1
position: 947535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947750:-1
position: 947750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:947098-947230:-1:exon

position:947098:-1
position: 947098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:947230:-1
position: 947230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:946294-946984:-1:exon

position:946984:-1
position: 946984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMG20B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HMG20B
product: high mobility group 20B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 184 samples with support for all annotated introns
transcript id: XM_010724795.2
SIO_010081: HMG20B
subclass of: SO_0000673
so part of: HMG20B
location: complement(join(946294..946984,947098..947230,947535..947750,947825..947900,948152..948204,948307..948427,948700..948903,949111..949216,950231..950297,950911..950953))
location: region:946294-950953:-1
so has part: feature:950911-950953:-1:exon
so has part: feature:950231-950297:-1:exon
so has part: feature:949111-949216:-1:exon
so has part: feature:948700-948903:-1:exon
so has part: feature:948307-948427:-1:exon
so has part: feature:948152-948204:-1:exon
so has part: feature:947825-947900:-1:exon
so has part: feature:947535-947750:-1:exon
so has part: feature:947098-947230:-1:exon
so has part: feature:946294-946984:-1:exon

position:950953:-1
position: 950953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950911-950953:-1:exon

position:950911:-1
position: 950911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950231-950297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:949111-949216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:948700-948903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:948307-948427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:948152-948204:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947825-947900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947535-947750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:947098-947230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:946294-946984:-1:exon

HMG20B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HMG20B
product: high mobility group 20B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_019609999.2
SIO_010081: HMG20B
subclass of: SO_0000673
so part of: HMG20B
location: complement(join(946294..946984,947098..947230,947535..947750,947825..947900,948152..948204,948307..948427,948700..948903,949111..949216,950231..950297,950900..950922))
location: region:946294-950922:-1
so has part: feature:950900-950922:-1:exon
so has part: feature:950231-950297:-1:exon
so has part: feature:949111-949216:-1:exon
so has part: feature:948700-948903:-1:exon
so has part: feature:948307-948427:-1:exon
so has part: feature:948152-948204:-1:exon
so has part: feature:947825-947900:-1:exon
so has part: feature:947535-947750:-1:exon
so has part: feature:947098-947230:-1:exon
so has part: feature:946294-946984:-1:exon

position:950922:-1
position: 950922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950900-950922:-1:exon

position:950900:-1
position: 950900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:950231-950297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:949111-949216:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:948700-948903:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:948307-948427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:948152-948204:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947825-947900:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947535-947750:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:947098-947230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:946294-946984:-1:exon

HMG20B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HMG20B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
translation: MAHSAKQPSAVMLHATGKAQHGNFLVAIKQEKGEVARASGEKPHGEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTQHPDLPFPEITKMLGAEWSKLQLSEKQRYLDEAEREKQQYMKELREYQQSEAYKMCTEKIQEKKIKKEDASSAAANTLLNGHPQKAGECSDAFSTFDVPIFTEEFLDQNKAREAELRRLRKMNTEFEEQNAILQKHTESMNCAKEKLEQELAQEERQTLALQQQLQSVRQALTTSFASLPIPGTGETPTLSTLDFYMAKLHSAIESNPLQHEKLVVRIKEILSRIASEHL
SIO_010081: HMG20B
subclass of: SO_0000673
so part of: HMG20B
location: complement(join(946972..946984,947098..947230,947535..947750,947825..947900,948152..948204,948307..948427,948700..948903,949111..949216,950231..950268))
location: region:946972-950268:-1
so has part: feature:950231-950268:-1:exon
so has part: feature:949111-949216:-1:exon
so has part: feature:948700-948903:-1:exon
so has part: feature:948307-948427:-1:exon
so has part: feature:948152-948204:-1:exon
so has part: feature:947825-947900:-1:exon
so has part: feature:947535-947750:-1:exon
so has part: feature:947098-947230:-1:exon
so has part: feature:946972-946984:-1:exon

XP_019465544.1
type: Protein
SIO_000068: ncbiprotein

position:946972:-1
position: 946972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950268:-1
position: 950268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950231-950268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949111-949216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:948700-948903:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:948307-948427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:948152-948204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:947825-947900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947535-947750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947098-947230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946972-946984:-1:exon

HMG20B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HMG20B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
translation: MAHSAKQPSAVMLHATGKAQHGNFLVAIKQEKGEVARASGEKPHGEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTQHPDLPFPEITKMLGAEWSKLQLSEKQRYLDEAEREKQQYMKELREYQQSEAYKMCTEKIQEKKIKKEDASSAAANTLLNGHPQKAGECSDAFSTFDVPIFTEEFLDQNKAREAELRRLRKMNTEFEEQNAILQKHTESMNCAKEKLEQELAQEERQTLALQQQLQSVRQALTTSFASLPIPGTGETPTLSTLDFYMAKLHSAIESNPLQHEKLVVRIKEILSRIASEHL
SIO_010081: HMG20B
subclass of: SO_0000673
so part of: HMG20B
location: complement(join(946972..946984,947098..947230,947535..947750,947825..947900,948152..948204,948307..948427,948700..948903,949111..949216,950231..950268))
location: region:946972-950268:-1
so has part: feature:950231-950268:-1:exon
so has part: feature:949111-949216:-1:exon
so has part: feature:948700-948903:-1:exon
so has part: feature:948307-948427:-1:exon
so has part: feature:948152-948204:-1:exon
so has part: feature:947825-947900:-1:exon
so has part: feature:947535-947750:-1:exon
so has part: feature:947098-947230:-1:exon
so has part: feature:946972-946984:-1:exon

XP_019465545.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:950231-950268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949111-949216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:948700-948903:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:948307-948427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:948152-948204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:947825-947900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947535-947750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947098-947230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946972-946984:-1:exon

HMG20B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HMG20B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
translation: MAHSAKQPSAVMLHATGKAQHGNFLVAIKQEKGEVARASGEKPHGEEEPVKKRGWPKGKKRKKILPNGPKAPVTGYVRFLNERREQIRTQHPDLPFPEITKMLGAEWSKLQLSEKQRYLDEAEREKQQYMKELREYQQSEAYKMCTEKIQEKKIKKEDASSAAANTLLNGHPQKAGECSDAFSTFDVPIFTEEFLDQNKAREAELRRLRKMNTEFEEQNAILQKHTESMNCAKEKLEQELAQEERQTLALQQQLQSVRQALTTSFASLPIPGTGETPTLSTLDFYMAKLHSAIESNPLQHEKLVVRIKEILSRIASEHL
SIO_010081: HMG20B
subclass of: SO_0000673
so part of: HMG20B
location: complement(join(946972..946984,947098..947230,947535..947750,947825..947900,948152..948204,948307..948427,948700..948903,949111..949216,950231..950268))
location: region:946972-950268:-1
so has part: feature:950231-950268:-1:exon
so has part: feature:949111-949216:-1:exon
so has part: feature:948700-948903:-1:exon
so has part: feature:948307-948427:-1:exon
so has part: feature:948152-948204:-1:exon
so has part: feature:947825-947900:-1:exon
so has part: feature:947535-947750:-1:exon
so has part: feature:947098-947230:-1:exon
so has part: feature:946972-946984:-1:exon

XP_010723097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:950231-950268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:949111-949216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:948700-948903:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:948307-948427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:948152-948204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:947825-947900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:947535-947750:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:947098-947230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:946972-946984:-1:exon

MFSD12
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MFSD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <953033..959580
location: region:953033-959580:1
so has part: feature:953033-959580:1:exon
subclass of: SO_0000010

100544054
type: Gene
SIO_000068: ncbigene

position:953033:1
position: 953033
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:959580:1
position: 959580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953033-959580:1:exon

MFSD12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MFSD12
product: major facilitator superfamily domain containing 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 197 samples with support for all annotated introns
transcript id: XM_003213190.3
SIO_010081: MFSD12
subclass of: SO_0000673
so part of: MFSD12
location: join(<953033..953273,955243..955453,956073..956196,956437..956634,956716..956808,956918..957010,957683..957853,958018..958112,958469..958599,959149..959580)
location: region:953033-959580:1
so has part: feature:953033-953273:1:exon
so has part: feature:955243-955453:1:exon
so has part: feature:956073-956196:1:exon
so has part: feature:956437-956634:1:exon
so has part: feature:956716-956808:1:exon
so has part: feature:956918-957010:1:exon
so has part: feature:957683-957853:1:exon
so has part: feature:958018-958112:1:exon
so has part: feature:958469-958599:1:exon
so has part: feature:959149-959580:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:953033-953273:1:exon

position:953273:1
position: 953273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:955243-955453:1:exon

position:955243:1
position: 955243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955453:1
position: 955453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:956073-956196:1:exon

position:956073:1
position: 956073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956196:1
position: 956196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:956437-956634:1:exon

position:956437:1
position: 956437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956634:1
position: 956634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:956716-956808:1:exon

position:956716:1
position: 956716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956808:1
position: 956808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:956918-957010:1:exon

position:956918:1
position: 956918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957010:1
position: 957010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:957683-957853:1:exon

position:957683:1
position: 957683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957853:1
position: 957853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:958018-958112:1:exon

position:958018:1
position: 958018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958112:1
position: 958112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:958469-958599:1:exon

position:958469:1
position: 958469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958599:1
position: 958599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:959149-959580:1:exon

position:959149:1
position: 959149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MFSD12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MFSD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 12
translation: LRARLSFAAGHFLNDLCASLWFTYLLLYLHAVLGYSHGLAGGLLLAGQVADGLCTPLLGYEADRSAGCGRYGRRKSWHLAGTTCVLISFPFIFNPCLGCKEGTPQWAAFIYYLPFIVIFQFGWAATQISHLSLIPELVTSDHEKVELTAFRYAFTVMANITVYGLAWLLLNLQVDQPERTEHLGIQDVSVFRNLSLIVVGLGAVFSLIFHLGTKEKLYPLGSVSQPQESTPLLQKEPTRSPRSLLVWKDWLLEPSFYQVAVLYMATRLIVNLSQTYIAMYLTNSLLLPKKYIATIPLVMYISGFLSSFLMKPVNKWIGRNLTYFVGILVILAFASWVSLSREMGAEIYGVAVLLGAGSATILVTSLSMTADLIGTNTHSSAFVYGAMSFTDKMANGLAVMLIQNLHPCPTELCCPACVSFYHWVMVLVTGGIAMAATVFLCCIMIWPIRVRFHNVALQELNDAGIQYHETESAEDRSLSSTVN
SIO_010081: MFSD12
subclass of: SO_0000673
so part of: MFSD12
location: join(<953033..953273,955243..955453,956073..956196,956437..956634,956716..956808,956918..957010,957683..957853,958018..958112,958469..958599,959149..959243)
location: region:953033-959243:1
so has part: feature:953033-953273:1:exon
so has part: feature:955243-955453:1:exon
so has part: feature:956073-956196:1:exon
so has part: feature:956437-956634:1:exon
so has part: feature:956716-956808:1:exon
so has part: feature:956918-957010:1:exon
so has part: feature:957683-957853:1:exon
so has part: feature:958018-958112:1:exon
so has part: feature:958469-958599:1:exon
so has part: feature:959149-959243:1:exon

XP_003213238.2
type: Protein
SIO_000068: ncbiprotein

position:959243:1
position: 959243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953033-953273:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:955243-955453:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:956073-956196:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956437-956634:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:956716-956808:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956918-957010:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:957683-957853:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:958018-958112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958469-958599:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:959149-959243:1:exon

LOC104914647
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 959814..963996
location: region:959814-963996:1
so has part: feature:959814-963996:1:exon
subclass of: SO_0000010

104914647
type: Gene
SIO_000068: ncbigene

position:959814:1
position: 959814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963996:1
position: 963996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959814-963996:1:exon

LOC104914647
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914647
product: GRAM domain-containing protein 2A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_010724797.2
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(959814..959998,961815..961937,962048..962120,962217..962390,962458..962556,962628..962699,962769..962837,962965..963028,963173..963259,963337..963418,963490..963597,963667..963996)
location: region:959814-963996:1
so has part: feature:959814-959998:1:exon
so has part: feature:961815-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962769-962837:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959814-959998:1:exon

position:959998:1
position: 959998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961815-961937:1:exon

position:961815:1
position: 961815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961937:1
position: 961937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:962048-962120:1:exon

position:962048:1
position: 962048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962120:1
position: 962120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:962217-962390:1:exon

position:962217:1
position: 962217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962390:1
position: 962390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:962458-962556:1:exon

position:962458:1
position: 962458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962556:1
position: 962556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:962628-962699:1:exon

position:962628:1
position: 962628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962699:1
position: 962699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:962769-962837:1:exon

position:962769:1
position: 962769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962837:1
position: 962837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:962965-963028:1:exon

position:962965:1
position: 962965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963028:1
position: 963028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:963173-963259:1:exon

position:963173:1
position: 963173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963259:1
position: 963259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:963337-963418:1:exon

position:963337:1
position: 963337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963418:1
position: 963418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:963490-963597:1:exon

position:963490:1
position: 963490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963597:1
position: 963597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:963667-963996:1:exon

position:963667:1
position: 963667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104914647
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914647
product: GRAM domain-containing protein 2A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_031557107.1
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(959814..959998,961815..961937,962048..962120,962217..962390,962458..962556,962628..962699,962965..963028,963173..963259,963337..963418,963490..963597,963667..963996)
location: region:959814-963996:1
so has part: feature:959814-959998:1:exon
so has part: feature:961815-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963996:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959814-959998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961815-961937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963667-963996:1:exon

LOC104914647
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRAM domain-containing protein 2A-like isoform X1
translation: MATARERWKEMIGSWAHCPAPCGPAANGNAPYRTGVGSRPALPSPQLRSGLAPLPRSTPGCSMSRRLRRSRRVVLEKPWQSLEERGSAQPDQHPALARSRTYDASTCIETPEASGQPGSPNPLSKRRAAFHKAFEEIAGREALLACFSCAWQREVPYHGRLYISSGHLCFHASLLLRDIKAVVPVASVCALKKTNTALLVPNALSIRTEQGEKFLFVSLRRREATYQLLKSLCRHLQDDAWSPPASPLNHSTEQSPKKSLTSSHSDLERCTPEPDDLLELQDEPNPTLNRAEEDEEEEEEMAEDTPVLGRGGPHTALAAQSAAQLRAFNTIIVLYLLLMVALLLTSGYIGLRILELEQQLAAMGAWPELRLVQRHKKT
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(959829..959998,961815..961937,962048..962120,962217..962390,962458..962556,962628..962699,962769..962837,962965..963028,963173..963259,963337..963418,963490..963597,963667..963682)
location: region:959829-963682:1
so has part: feature:959829-959998:1:exon
so has part: feature:961815-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962769-962837:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963682:1:exon

XP_010723099.1
type: Protein
SIO_000068: ncbiprotein

position:959829:1
position: 959829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963682:1
position: 963682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959829-959998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961815-961937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962769-962837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963667-963682:1:exon

LOC104914647
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRAM domain-containing protein 2A-like isoform X2
translation: MATARERWKEMIGSWAHCPAPCGPAANGNAPYRTGVGSRPALPSPQLRSGLAPLPRSTPGCSMSRRLRRSRRVVLEKPWQSLEERGSAQPDQHPALARSRTYDASTCIETPEASGQPGSPNPLSKRRAAFHKAFEEIAGREALLACFSCAWQREVPYHGRLYISSGHLCFHASLLLRDIKAVVPVASVCALKKTNTALLVPNALSIRTEQGEKFLFVSLRRREATYQLLKSLCRHLQTSSHSDLERCTPEPDDLLELQDEPNPTLNRAEEDEEEEEEMAEDTPVLGRGGPHTALAAQSAAQLRAFNTIIVLYLLLMVALLLTSGYIGLRILELEQQLAAMGAWPELRLVQRHKKT
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(959829..959998,961815..961937,962048..962120,962217..962390,962458..962556,962628..962699,962965..963028,963173..963259,963337..963418,963490..963597,963667..963682)
location: region:959829-963682:1
so has part: feature:959829-959998:1:exon
so has part: feature:961815-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963682:1:exon

XP_031412967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:959829-959998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:961815-961937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963667-963682:1:exon

LOC104914647
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914647
product: GRAM domain-containing protein 2A-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_010724801.2
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(960000..960079,961815..961937,962048..962120,962217..962390,962458..962556,962628..962699,962769..962837,962965..963028,963173..963259,963337..963418,963490..963597,963667..963996)
location: region:960000-963996:1
so has part: feature:960000-960079:1:exon
so has part: feature:961815-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962769-962837:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963996:1:exon

position:960000:1
position: 960000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960000-960079:1:exon

position:960079:1
position: 960079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961815-961937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962769-962837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963667-963996:1:exon

LOC104914647
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914647
product: GRAM domain-containing protein 2A-like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010724802.2
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(960215..960288,961815..961937,962048..962120,962217..962390,962458..962556,962628..962699,962769..962837,962965..963028,963173..963259,963337..963418,963490..963597,963667..963996)
location: region:960215-963996:1
so has part: feature:960215-960288:1:exon
so has part: feature:961815-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962769-962837:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963996:1:exon

position:960215:1
position: 960215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960215-960288:1:exon

position:960288:1
position: 960288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961815-961937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962769-962837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963667-963996:1:exon

LOC104914647
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914647
product: GRAM domain-containing protein 2A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_010724800.3
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(960424..961242,961815..961937,962048..962120,962217..962390,962458..962556,962628..962699,962769..962837,962965..963028,963173..963259,963337..963418,963490..963597,963667..963996)
location: region:960424-963996:1
so has part: feature:960424-961242:1:exon
so has part: feature:961815-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962769-962837:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963996:1:exon

position:960424:1
position: 960424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960424-961242:1:exon

position:961242:1
position: 961242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961815-961937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962769-962837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963667-963996:1:exon

LOC104914647
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914647
product: GRAM domain-containing protein 2A-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_031557108.1
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(961264..961731,961815..961937,962048..962120,962217..962390,962458..962556,962628..962699,962769..962837,962965..963028,963173..963259,963337..963418,963490..963597,963667..963996)
location: region:961264-963996:1
so has part: feature:961264-961731:1:exon
so has part: feature:961815-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962769-962837:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963996:1:exon

position:961264:1
position: 961264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961264-961731:1:exon

position:961731:1
position: 961731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961815-961937:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962769-962837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:963667-963996:1:exon

LOC104914647
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRAM domain-containing protein 2A-like isoform X3
translation: MSRRLRRSRRVVLEKPWQSLEERGSAQPDQHPALARSRTYDASTCIETPEASGQPGSPNPLSKRRAAFHKAFEEIAGREALLACFSCAWQREVPYHGRLYISSGHLCFHASLLLRDIKAVVPVASVCALKKTNTALLVPNALSIRTEQGEKFLFVSLRRREATYQLLKSLCRHLQDDAWSPPASPLNHSTEQSPKKSLTSSHSDLERCTPEPDDLLELQDEPNPTLNRAEEDEEEEEEMAEDTPVLGRGGPHTALAAQSAAQLRAFNTIIVLYLLLMVALLLTSGYIGLRILELEQQLAAMGAWPELRLVQRHKKT
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(961831..961937,962048..962120,962217..962390,962458..962556,962628..962699,962769..962837,962965..963028,963173..963259,963337..963418,963490..963597,963667..963682)
location: region:961831-963682:1
so has part: feature:961831-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962769-962837:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963682:1:exon

XP_031412968.1
type: Protein
SIO_000068: ncbiprotein

position:961831:1
position: 961831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961831-961937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962769-962837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963667-963682:1:exon

LOC104914647
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRAM domain-containing protein 2A-like isoform X3
translation: MSRRLRRSRRVVLEKPWQSLEERGSAQPDQHPALARSRTYDASTCIETPEASGQPGSPNPLSKRRAAFHKAFEEIAGREALLACFSCAWQREVPYHGRLYISSGHLCFHASLLLRDIKAVVPVASVCALKKTNTALLVPNALSIRTEQGEKFLFVSLRRREATYQLLKSLCRHLQDDAWSPPASPLNHSTEQSPKKSLTSSHSDLERCTPEPDDLLELQDEPNPTLNRAEEDEEEEEEMAEDTPVLGRGGPHTALAAQSAAQLRAFNTIIVLYLLLMVALLLTSGYIGLRILELEQQLAAMGAWPELRLVQRHKKT
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(961831..961937,962048..962120,962217..962390,962458..962556,962628..962699,962769..962837,962965..963028,963173..963259,963337..963418,963490..963597,963667..963682)
location: region:961831-963682:1
so has part: feature:961831-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962769-962837:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963682:1:exon

XP_010723102.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:961831-961937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962769-962837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963667-963682:1:exon

LOC104914647
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRAM domain-containing protein 2A-like isoform X3
translation: MSRRLRRSRRVVLEKPWQSLEERGSAQPDQHPALARSRTYDASTCIETPEASGQPGSPNPLSKRRAAFHKAFEEIAGREALLACFSCAWQREVPYHGRLYISSGHLCFHASLLLRDIKAVVPVASVCALKKTNTALLVPNALSIRTEQGEKFLFVSLRRREATYQLLKSLCRHLQDDAWSPPASPLNHSTEQSPKKSLTSSHSDLERCTPEPDDLLELQDEPNPTLNRAEEDEEEEEEMAEDTPVLGRGGPHTALAAQSAAQLRAFNTIIVLYLLLMVALLLTSGYIGLRILELEQQLAAMGAWPELRLVQRHKKT
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(961831..961937,962048..962120,962217..962390,962458..962556,962628..962699,962769..962837,962965..963028,963173..963259,963337..963418,963490..963597,963667..963682)
location: region:961831-963682:1
so has part: feature:961831-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962769-962837:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963682:1:exon

XP_010723103.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:961831-961937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962769-962837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963667-963682:1:exon

LOC104914647
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914647
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRAM domain-containing protein 2A-like isoform X3
translation: MSRRLRRSRRVVLEKPWQSLEERGSAQPDQHPALARSRTYDASTCIETPEASGQPGSPNPLSKRRAAFHKAFEEIAGREALLACFSCAWQREVPYHGRLYISSGHLCFHASLLLRDIKAVVPVASVCALKKTNTALLVPNALSIRTEQGEKFLFVSLRRREATYQLLKSLCRHLQDDAWSPPASPLNHSTEQSPKKSLTSSHSDLERCTPEPDDLLELQDEPNPTLNRAEEDEEEEEEMAEDTPVLGRGGPHTALAAQSAAQLRAFNTIIVLYLLLMVALLLTSGYIGLRILELEQQLAAMGAWPELRLVQRHKKT
SIO_010081: LOC104914647
subclass of: SO_0000673
so part of: LOC104914647
location: join(961831..961937,962048..962120,962217..962390,962458..962556,962628..962699,962769..962837,962965..963028,963173..963259,963337..963418,963490..963597,963667..963682)
location: region:961831-963682:1
so has part: feature:961831-961937:1:exon
so has part: feature:962048-962120:1:exon
so has part: feature:962217-962390:1:exon
so has part: feature:962458-962556:1:exon
so has part: feature:962628-962699:1:exon
so has part: feature:962769-962837:1:exon
so has part: feature:962965-963028:1:exon
so has part: feature:963173-963259:1:exon
so has part: feature:963337-963418:1:exon
so has part: feature:963490-963597:1:exon
so has part: feature:963667-963682:1:exon

XP_010723104.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:961831-961937:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:962048-962120:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962217-962390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962458-962556:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962628-962699:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962769-962837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:962965-963028:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:963173-963259:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:963337-963418:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:963490-963597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:963667-963682:1:exon

C30H19orf71
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: C30H19orf71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(963954..965057)
location: region:963954-965057:-1
so has part: feature:963954-965057:-1:exon
subclass of: SO_0000010

104914646
type: Gene
SIO_000068: ncbigene

position:963954:-1
position: 963954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965057:-1
position: 965057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963954-965057:-1:exon

C30H19orf71
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: C30H19orf71
product: chromosome 30 C19orf71 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010724796.3
SIO_010081: C30H19orf71
subclass of: SO_0000673
so part of: C30H19orf71
location: complement(join(963954..964275,964355..964480,964650..964864,964938..965057))
location: region:963954-965057:-1
so has part: feature:964938-965057:-1:exon
so has part: feature:964650-964864:-1:exon
so has part: feature:964355-964480:-1:exon
so has part: feature:963954-964275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:964938-965057:-1:exon

position:964938:-1
position: 964938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:964650-964864:-1:exon

position:964650:-1
position: 964650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964864:-1
position: 964864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:964355-964480:-1:exon

position:964355:-1
position: 964355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:964480:-1
position: 964480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:963954-964275:-1:exon

position:964275:-1
position: 964275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C30H19orf71
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: C30H19orf71
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C19orf71 homolog
translation: MKPGVHRAWVPQSTLETDFPLPLGSEQYVTLRGPRCAPVVRQAVRWKMTPLGRDAAGQSWWTEPSCHGAEDVRDGLTHGTAWQRSHGPPELEPLPPVYDQHLREVACWDPTVPAAYPGPGTRWGAFLWQECPILGKEYVATRSQSTAGPGGSSGYVPLLSFCSPQTTARDVCTWSLLQHQPSTSHK
SIO_010081: C30H19orf71
subclass of: SO_0000673
so part of: C30H19orf71
location: complement(join(964130..964275,964355..964480,964650..964864,964938..965011))
location: region:964130-965011:-1
so has part: feature:964938-965011:-1:exon
so has part: feature:964650-964864:-1:exon
so has part: feature:964355-964480:-1:exon
so has part: feature:964130-964275:-1:exon

XP_010723098.1
type: Protein
SIO_000068: ncbiprotein

position:964130:-1
position: 964130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965011:-1
position: 965011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964938-965011:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:964650-964864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:964355-964480:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:964130-964275:-1:exon

FZR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FZR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(967829..977711)
location: region:967829-977711:-1
so has part: feature:967829-977711:-1:exon
subclass of: SO_0000010

100542102
type: Gene
SIO_000068: ncbigene

position:967829:-1
position: 967829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977711:-1
position: 977711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967829-977711:-1:exon

FZR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FZR1
product: fizzy and cell division cycle 20 related 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 108 samples with support for all annotated introns
transcript id: XM_010724806.3
SIO_010081: FZR1
subclass of: SO_0000673
so part of: FZR1
location: complement(join(967829..968011,968655..968759,968840..969073,969927..970111,970670..970772,971213..971278,971458..971641,972042..972124,972569..972696,973130..973193,973413..973538,974466..974607,976586..977711))
location: region:967829-977711:-1
so has part: feature:976586-977711:-1:exon
so has part: feature:974466-974607:-1:exon
so has part: feature:973413-973538:-1:exon
so has part: feature:973130-973193:-1:exon
so has part: feature:972569-972696:-1:exon
so has part: feature:972042-972124:-1:exon
so has part: feature:971458-971641:-1:exon
so has part: feature:971213-971278:-1:exon
so has part: feature:970670-970772:-1:exon
so has part: feature:969927-970111:-1:exon
so has part: feature:968840-969073:-1:exon
so has part: feature:968655-968759:-1:exon
so has part: feature:967829-968011:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:976586-977711:-1:exon

position:976586:-1
position: 976586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974466-974607:-1:exon

position:974466:-1
position: 974466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974607:-1
position: 974607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:973413-973538:-1:exon

position:973413:-1
position: 973413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973538:-1
position: 973538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:973130-973193:-1:exon

position:973130:-1
position: 973130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973193:-1
position: 973193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:972569-972696:-1:exon

position:972569:-1
position: 972569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972696:-1
position: 972696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:972042-972124:-1:exon

position:972042:-1
position: 972042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972124:-1
position: 972124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:971458-971641:-1:exon

position:971458:-1
position: 971458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971641:-1
position: 971641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:971213-971278:-1:exon

position:971213:-1
position: 971213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971278:-1
position: 971278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:970670-970772:-1:exon

position:970670:-1
position: 970670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970772:-1
position: 970772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:969927-970111:-1:exon

position:969927:-1
position: 969927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970111:-1
position: 970111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:968840-969073:-1:exon

position:968840:-1
position: 968840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969073:-1
position: 969073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:968655-968759:-1:exon

position:968655:-1
position: 968655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968759:-1
position: 968759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:967829-968011:-1:exon

position:968011:-1
position: 968011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FZR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FZR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fizzy-related protein homolog
translation: MDQDYERRLLRQINIQNENTMPCVAEMRRTLTPSNSPMSSPSKHGDRFIPSRAGANWSINFHRINENEKSPSQNRKAKDATSDNGKDGLAYSALLKNELLGAGIEKVQDPQTEDRRLQPSTPEKKSLFTYSLSTKRSSPDDGNEVSPYSLSPVSNKSQKLLRSPRKPTRKISKIPFKVLDAPELQDDFYLNLVDWSSLNVLSVGLGTCVYLWSACTSQVTRLCDLSVEGDSVTSVGWSERGTLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNADQLSSGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWSTDHQLLASGGNDNKLLVWNHSSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCIDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIVTGAGDETLRFWNVFSKTRSTKVRVRAAAAGIQAVCSLLLPHLWVH
SIO_010081: FZR1
subclass of: SO_0000673
so part of: FZR1
location: complement(join(967844..968011,968655..968759,968840..969073,969927..970111,970670..970772,971213..971278,971458..971641,972042..972124,972569..972696,973130..973193,973413..973538,974466..974534))
location: region:967844-974534:-1
so has part: feature:974466-974534:-1:exon
so has part: feature:973413-973538:-1:exon
so has part: feature:973130-973193:-1:exon
so has part: feature:972569-972696:-1:exon
so has part: feature:972042-972124:-1:exon
so has part: feature:971458-971641:-1:exon
so has part: feature:971213-971278:-1:exon
so has part: feature:970670-970772:-1:exon
so has part: feature:969927-970111:-1:exon
so has part: feature:968840-969073:-1:exon
so has part: feature:968655-968759:-1:exon
so has part: feature:967844-968011:-1:exon

XP_010723108.1
type: Protein
SIO_000068: ncbiprotein

position:967844:-1
position: 967844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974534:-1
position: 974534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:974466-974534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:973413-973538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:973130-973193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:972569-972696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:972042-972124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971458-971641:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971213-971278:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:970670-970772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:969927-970111:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:968840-969073:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:968655-968759:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:967844-968011:-1:exon

LOC104914649
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 979281..981892
location: region:979281-981892:1
so has part: feature:979281-981892:1:exon
subclass of: SO_0000010

104914649
type: Gene
SIO_000068: ncbigene

position:979281:1
position: 979281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981892:1
position: 981892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979281-981892:1:exon

LOC104914649
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914649
product: protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 215 samples with support for all annotated introns
transcript id: XM_010724807.2
SIO_010081: LOC104914649
subclass of: SO_0000673
so part of: LOC104914649
location: join(979281..979462,980589..981892)
location: region:979281-981892:1
so has part: feature:979281-979462:1:exon
so has part: feature:980589-981892:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979281-979462:1:exon

position:979462:1
position: 979462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:980589-981892:1:exon

position:980589:1
position: 980589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104914649
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like isoform X1
translation: MRERLLVLLCALARRAGGRRRAMAGRWDGPQRRAWIRHYYSQRQKRLMTLLIARRRRTSCYFYPRAWPSLRGADWWERVVLKEFGPQDWLEKFRMSRETFFYICNHLRPGLAPHSSHFHPTLPLEKRVAVALWHLATNVEYQTLSPLFGVGPSTVQTCVREVSYAVVLLLKPLYLRLPDEKELENMVRIFRTRWGFPHCIGALDSLHIPINPPLRLSADYCNGQGWHSILTQATVDGLGQFWDVSTAFPGSMENSAVLESSSLWVLAKEGRLCPNRPRTSWARHRSTCCWVTPLTPCRTGFSSPTRRMRASPSASCSSIIASSGRTA
SIO_010081: LOC104914649
subclass of: SO_0000673
so part of: LOC104914649
location: join(979316..979462,980589..981425)
location: region:979316-981425:1
so has part: feature:979316-979462:1:exon
so has part: feature:980589-981425:1:exon

XP_010723109.1
type: Protein
SIO_000068: ncbiprotein

position:979316:1
position: 979316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981425:1
position: 981425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979316-979462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:980589-981425:1:exon

LOC104914649
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914649
product: protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 157 samples with support for all annotated introns
transcript id: XM_010724808.3
SIO_010081: LOC104914649
subclass of: SO_0000673
so part of: LOC104914649
location: join(979927..980116,980589..981892)
location: region:979927-981892:1
so has part: feature:979927-980116:1:exon
so has part: feature:980589-981892:1:exon

position:979927:1
position: 979927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979927-980116:1:exon

position:980116:1
position: 980116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:980589-981892:1:exon

LOC104914649
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914649
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like isoform X2
translation: MDTKDRKDTEGTQVTGTPRLLIARRRRTSCYFYPRAWPSLRGADWWERVVLKEFGPQDWLEKFRMSRETFFYICNHLRPGLAPHSSHFHPTLPLEKRVAVALWHLATNVEYQTLSPLFGVGPSTVQTCVREVSYAVVLLLKPLYLRLPDEKELENMVRIFRTRWGFPHCIGALDSLHIPINPPLRLSADYCNGQGWHSILTQATVDGLGQFWDVSTAFPGSMENSAVLESSSLWVLAKEGRLCPNRPRTSWARHRSTCCWVTPLTPCRTGFSSPTRRMRASPSASCSSIIASSGRTA
SIO_010081: LOC104914649
subclass of: SO_0000673
so part of: LOC104914649
location: join(980060..980116,980589..981425)
location: region:980060-981425:1
so has part: feature:980060-980116:1:exon
so has part: feature:980589-981425:1:exon

XP_010723110.1
type: Protein
SIO_000068: ncbiprotein

position:980060:1
position: 980060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980060-980116:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:980589-981425:1:exon

DOHH
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DOHH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 983123..986244
location: region:983123-986244:1
so has part: feature:983123-986244:1:exon
subclass of: SO_0000010

100542254
type: Gene
SIO_000068: ncbigene

position:983123:1
position: 983123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986244:1
position: 986244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983123-986244:1:exon

DOHH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DOHH
product: deoxyhypusine hydroxylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_003213180.3
SIO_010081: DOHH
subclass of: SO_0000673
so part of: DOHH
location: join(983123..983221,983472..983782,984640..984716,984911..985148,985805..986244)
location: region:983123-986244:1
so has part: feature:983123-983221:1:exon
so has part: feature:983472-983782:1:exon
so has part: feature:984640-984716:1:exon
so has part: feature:984911-985148:1:exon
so has part: feature:985805-986244:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:983123-983221:1:exon

position:983221:1
position: 983221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:983472-983782:1:exon

position:983472:1
position: 983472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983782:1
position: 983782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:984640-984716:1:exon

position:984640:1
position: 984640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984716:1
position: 984716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:984911-985148:1:exon

position:984911:1
position: 984911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985148:1
position: 985148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:985805-986244:1:exon

position:985805:1
position: 985805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DOHH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DOHH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxyhypusine hydroxylase
translation: MVTEEEVAAVGRTLLDAAQPLPARFRALFTLRNLGGPAAIDCIVRGFADSSALLKHELAFCLGQMRDRAAIPALLGVLQDSRQEPMVRHEAGEALGAIGDPEVLDILRHYSEDPVVEVAETCQLAVRRLEWLQEHGEEPGSSPYHSVDPAPPAEETDVATLHAVLLDESRPLFDRYRAMFALRNLGGRDAVLALADGLRAGSALFRHEIGYVLGQMQDEACVPQLTAALCSRAENPMVRHECAEALGSIARPSCLETLRAFAQDEERVVRESCEVALDMYEYENGPQFQYADGLCRLQA
SIO_010081: DOHH
subclass of: SO_0000673
so part of: DOHH
location: join(983509..983782,984640..984716,984911..985148,985805..986115)
location: region:983509-986115:1
so has part: feature:983509-983782:1:exon
so has part: feature:984640-984716:1:exon
so has part: feature:984911-985148:1:exon
so has part: feature:985805-986115:1:exon

XP_003213228.1
type: Protein
SIO_000068: ncbiprotein

position:983509:1
position: 983509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986115:1
position: 986115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983509-983782:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:984640-984716:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:984911-985148:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985805-986115:1:exon

SMIM24
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SMIM24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 990468..991198
location: region:990468-991198:1
so has part: feature:990468-991198:1:exon
subclass of: SO_0000010

104914650
type: Gene
SIO_000068: ncbigene

position:990468:1
position: 990468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991198:1
position: 991198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990468-991198:1:exon

SMIM24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SMIM24
product: small integral membrane protein 24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_010724809.2
SIO_010081: SMIM24
subclass of: SO_0000673
so part of: SMIM24
location: join(990468..990766,990845..990883,990996..991198)
location: region:990468-991198:1
so has part: feature:990468-990766:1:exon
so has part: feature:990845-990883:1:exon
so has part: feature:990996-991198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:990468-990766:1:exon

position:990766:1
position: 990766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:990845-990883:1:exon

position:990845:1
position: 990845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990883:1
position: 990883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:990996-991198:1:exon

position:990996:1
position: 990996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMIM24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SMIM24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 24
translation: MSPSPSPVPTAVPTLIPVLCSHPYRCPHRHRCPSPRLSPFPPIHVHVPTRVPAPPAAGSRQLQPWLIGLTAVVVFLFVVFVLLLAGRLWRLRTRREREDDSEKRSTHSMERAAYSNAAAEKDSDDEREKSKATSL
SIO_010081: SMIM24
subclass of: SO_0000673
so part of: SMIM24
location: join(990483..990766,990845..990883,990996..991080)
location: region:990483-991080:1
so has part: feature:990483-990766:1:exon
so has part: feature:990845-990883:1:exon
so has part: feature:990996-991080:1:exon

XP_010723111.1
type: Protein
SIO_000068: ncbiprotein

position:990483:1
position: 990483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991080:1
position: 991080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990483-990766:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:990845-990883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:990996-991080:1:exon

LOC116217493
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(999666..1003683)
location: region:999666-1003683:-1
so has part: feature:999666-1003683:-1:exon
subclass of: SO_0000010

116217493
type: Gene
SIO_000068: ncbigene

position:999666:-1
position: 999666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003683:-1
position: 1003683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999666-1003683:-1:exon

LOC116217493
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC116217493
product: proline-rich receptor-like protein kinase PERK2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_031557110.1
SIO_010081: LOC116217493
subclass of: SO_0000673
so part of: LOC116217493
location: complement(join(999666..1001386,1002309..1003683))
location: region:999666-1003683:-1
so has part: feature:1002309-1003683:-1:exon
so has part: feature:999666-1001386:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002309-1003683:-1:exon

position:1002309:-1
position: 1002309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:999666-1001386:-1:exon

position:1001386:-1
position: 1001386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217493
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC116217493
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich receptor-like protein kinase PERK2
translation: MPQTQRPLCSQCTHHLHAPHCVHPAQHPAPSPRIRRPLQWCSGVAKHPELCATCICVPCIQPPVHPMHCAHSVPFTRHCEHPLHPSPCAPSAPCTQHLVHPTLPSPCVPNTLCILCTVHPAPHALLVLCTLCMQQPMYPILPSPHALCAPSALCTMNPTPPCSMHHSRCAPSTPCTMQPAPHAPHAPSTPCTMHPTPHAPCAPCAPCRQHPMHAMHPAPHTPCAPCAPCTQQLRHSMHPAPRTPGTGCTPRTQLPAPRSLCTDTSGDLHPCSSPQDLRTTAPAPNTEGPGDPLLSPSRVWHHCGGQSRPSHAGSGRIEAGTVIPPPCDPQVGSHRFRQL
SIO_010081: LOC116217493
subclass of: SO_0000673
so part of: LOC116217493
location: complement(1002561..1003580)
location: region:1002561-1003580:-1
so has part: feature:1002561-1003580:-1:exon

XP_031412970.1
type: Protein
SIO_000068: ncbiprotein

position:1002561:-1
position: 1002561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003580:-1
position: 1003580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002561-1003580:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1006511..1006610
location: region:1006511-1006610:1
so has part: feature:1006511-1006610:1:region

position:1006511:1
position: 1006511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006610:1
position: 1006610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006511-1006610:1:region

NFIC
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NFIC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1006902..1018451)
location: region:1006902-1018451:-1
so has part: feature:1006902-1018451:-1:exon
subclass of: SO_0000010

100550419
type: Gene
SIO_000068: ncbigene

position:1006902:-1
position: 1006902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018451:-1
position: 1018451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006902-1018451:-1:exon

NFIC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NFIC
product: nuclear factor I C
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031557109.1
SIO_010081: NFIC
subclass of: SO_0000673
so part of: NFIC
location: complement(join(1006902..1007294,1007392..1007466,1007734..1007805,1016654..1017185,1017731..1018451))
location: region:1006902-1018451:-1
so has part: feature:1017731-1018451:-1:exon
so has part: feature:1016654-1017185:-1:exon
so has part: feature:1007734-1007805:-1:exon
so has part: feature:1007392-1007466:-1:exon
so has part: feature:1006902-1007294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1017731-1018451:-1:exon

position:1017731:-1
position: 1017731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1016654-1017185:-1:exon

position:1016654:-1
position: 1016654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017185:-1
position: 1017185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1007734-1007805:-1:exon

position:1007734:-1
position: 1007734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007805:-1
position: 1007805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1007392-1007466:-1:exon

position:1007392:-1
position: 1007392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1007466:-1
position: 1007466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1006902-1007294:-1:exon

position:1007294:-1
position: 1007294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NFIC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NFIC
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nuclear factor 1 C-type
translation: MCRVPALWVLAGWGRGTAWHKWPEDEFHPFIEALLPHVRAFAYTWFNLQARKRKYFKKHEKRMTKDEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPECREDFVLSITGKKPSCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKAGQCTNPILCIQPHHISVSVKELDLYLAYFVRERDSEQSSSPRTGIASDQEDTKPNTLDSTDFQESFVTSGVFSVTELIQVSRTPVVTGTGPNFSLGELQGHLAYDLNPSSTGMRRTLPSTSSSGWVPPGDAGAMPGPVQARLCGMAWARRVLPCAARLPALRGGWGKLGEWAAALLLWYRASIWVPRHGSGTPAHFGYPDTVLATWF
SIO_010081: NFIC
subclass of: SO_0000673
so part of: NFIC
location: complement(join(1006917..1007294,1007392..1007466,1007734..1007805,1016654..1017185,1017731..1017802))
location: region:1006917-1017802:-1
so has part: feature:1017731-1017802:-1:exon
so has part: feature:1016654-1017185:-1:exon
so has part: feature:1007734-1007805:-1:exon
so has part: feature:1007392-1007466:-1:exon
so has part: feature:1006917-1007294:-1:exon

XP_031412969.1
type: Protein
SIO_000068: ncbiprotein

position:1006917:-1
position: 1006917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017802:-1
position: 1017802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017731-1017802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1016654-1017185:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1007734-1007805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1007392-1007466:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006917-1007294:-1:exon

UNC13A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: UNC13A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1059328..1085420
location: region:1059328-1085420:1
so has part: feature:1059328-1085420:1:exon
subclass of: SO_0000010

100549757
type: Gene
SIO_000068: ncbigene

position:1059328:1
position: 1059328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085420:1
position: 1085420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059328-1085420:1:exon

UNC13A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UNC13A
product: unc-13 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724818.1
SIO_010081: UNC13A
subclass of: SO_0000673
so part of: UNC13A
location: join(1059328..1059405,1060676..1060705,1060909..1061008,1061263..1061380,1061579..1061702,1061779..1061852,1061932..1061986,1062133..1062168,1062259..1062469,1064341..1064910,1066032..1066125,1066930..1066979,1067599..1067677,1068684..1068689,1068776..1068861,1069423..1069640,1070128..1070355,1070725..1070866,1070997..1071166,1071358..1071473,1071558..1071721,1071872..1072022,1073522..1073590,1073682..1073771,1073850..1073984,1074127..1074260,1074551..1074636,1074794..1074920,1075002..1075098,1075187..1075330,1075493..1075576,1075809..1075886,1076091..1076179,1076266..1076418,1076635..1076758,1077939..1077944,1079637..1079675,1080390..1080419,1081240..1081296,1081382..1081462,1081555..1081702,1083144..1083236,1083311..1083470,1083992..1085420)
location: region:1059328-1085420:1
so has part: feature:1059328-1059405:1:exon
so has part: feature:1060676-1060705:1:exon
so has part: feature:1060909-1061008:1:exon
so has part: feature:1061263-1061380:1:exon
so has part: feature:1061579-1061702:1:exon
so has part: feature:1061779-1061852:1:exon
so has part: feature:1061932-1061986:1:exon
so has part: feature:1062133-1062168:1:exon
so has part: feature:1062259-1062469:1:exon
so has part: feature:1064341-1064910:1:exon
so has part: feature:1066032-1066125:1:exon
so has part: feature:1066930-1066979:1:exon
so has part: feature:1067599-1067677:1:exon
so has part: feature:1068684-1068689:1:exon
so has part: feature:1068776-1068861:1:exon
so has part: feature:1069423-1069640:1:exon
so has part: feature:1070128-1070355:1:exon
so has part: feature:1070725-1070866:1:exon
so has part: feature:1070997-1071166:1:exon
so has part: feature:1071358-1071473:1:exon
so has part: feature:1071558-1071721:1:exon
so has part: feature:1071872-1072022:1:exon
so has part: feature:1073522-1073590:1:exon
so has part: feature:1073682-1073771:1:exon
so has part: feature:1073850-1073984:1:exon
so has part: feature:1074127-1074260:1:exon
so has part: feature:1074551-1074636:1:exon
so has part: feature:1074794-1074920:1:exon
so has part: feature:1075002-1075098:1:exon
so has part: feature:1075187-1075330:1:exon
so has part: feature:1075493-1075576:1:exon
so has part: feature:1075809-1075886:1:exon
so has part: feature:1076091-1076179:1:exon
so has part: feature:1076266-1076418:1:exon
so has part: feature:1076635-1076758:1:exon
so has part: feature:1077939-1077944:1:exon
so has part: feature:1079637-1079675:1:exon
so has part: feature:1080390-1080419:1:exon
so has part: feature:1081240-1081296:1:exon
so has part: feature:1081382-1081462:1:exon
so has part: feature:1081555-1081702:1:exon
so has part: feature:1083144-1083236:1:exon
so has part: feature:1083311-1083470:1:exon
so has part: feature:1083992-1085420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1059328-1059405:1:exon

position:1059405:1
position: 1059405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1060676-1060705:1:exon

position:1060676:1
position: 1060676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060705:1
position: 1060705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1060909-1061008:1:exon

position:1060909:1
position: 1060909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061008:1
position: 1061008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1061263-1061380:1:exon

position:1061263:1
position: 1061263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061380:1
position: 1061380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1061579-1061702:1:exon

position:1061579:1
position: 1061579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061702:1
position: 1061702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1061779-1061852:1:exon

position:1061779:1
position: 1061779
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