Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 29, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 29, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015039.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015039.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000990.2.\nOn Dec 18, 2014 this sequence version replaced NC_015039.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 4328165
topology: linear
so has quality: SO_0000987
location: 1..4328165
location: region:1-4328165:1
RO_0002162: 9103

NC_015039
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4328165:1
position: 4328165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-4328165:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 29
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

LOC104914549
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 29108..39562
location: region:29108-39562:1
so has part: feature:29108-39562:1:exon
subclass of: SO_0000010

104914549
type: Gene
SIO_000068: ncbigene

position:29108:1
position: 29108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39562:1
position: 39562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29108-39562:1:exon

LOC104914549
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914549
product: von Willebrand factor A domain-containing protein 5A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031557025.1
SIO_010081: LOC104914549
subclass of: SO_0000673
so part of: LOC104914549
location: join(29108..29197,31264..31319,31696..31993,32099..32321,32658..32800,32955..33066,33496..33623,33773..33861,34362..34506,34838..34917,35405..35513,36418..36582,36724..36827,37128..37309,37474..37680,38145..38368,38482..38608,38802..39562)
location: region:29108-39562:1
so has part: feature:29108-29197:1:exon
so has part: feature:31264-31319:1:exon
so has part: feature:31696-31993:1:exon
so has part: feature:32099-32321:1:exon
so has part: feature:32658-32800:1:exon
so has part: feature:32955-33066:1:exon
so has part: feature:33496-33623:1:exon
so has part: feature:33773-33861:1:exon
so has part: feature:34362-34506:1:exon
so has part: feature:34838-34917:1:exon
so has part: feature:35405-35513:1:exon
so has part: feature:36418-36582:1:exon
so has part: feature:36724-36827:1:exon
so has part: feature:37128-37309:1:exon
so has part: feature:37474-37680:1:exon
so has part: feature:38145-38368:1:exon
so has part: feature:38482-38608:1:exon
so has part: feature:38802-39562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29108-29197:1:exon

position:29197:1
position: 29197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:31264-31319:1:exon

position:31264:1
position: 31264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31319:1
position: 31319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:31696-31993:1:exon

position:31696:1
position: 31696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31993:1
position: 31993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:32099-32321:1:exon

position:32099:1
position: 32099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32321:1
position: 32321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:32658-32800:1:exon

position:32658:1
position: 32658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32800:1
position: 32800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:32955-33066:1:exon

position:32955:1
position: 32955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33066:1
position: 33066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:33496-33623:1:exon

position:33496:1
position: 33496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33623:1
position: 33623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:33773-33861:1:exon

position:33773:1
position: 33773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33861:1
position: 33861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:34362-34506:1:exon

position:34362:1
position: 34362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34506:1
position: 34506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:34838-34917:1:exon

position:34838:1
position: 34838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34917:1
position: 34917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:35405-35513:1:exon

position:35405:1
position: 35405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35513:1
position: 35513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:36418-36582:1:exon

position:36418:1
position: 36418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36582:1
position: 36582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:36724-36827:1:exon

position:36724:1
position: 36724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36827:1
position: 36827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:37128-37309:1:exon

position:37128:1
position: 37128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37309:1
position: 37309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:37474-37680:1:exon

position:37474:1
position: 37474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37680:1
position: 37680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:38145-38368:1:exon

position:38145:1
position: 38145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38368:1
position: 38368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:38482-38608:1:exon

position:38482:1
position: 38482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38608:1
position: 38608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:38802-39562:1:exon

position:38802:1
position: 38802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104914549
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914549
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: von Willebrand factor A domain-containing protein 5A-like
translation: MSMELAYARKLKTEYSSLARTEDTQVKRRFVSRDVASEFWTFRKKRHQCNVLFVGLDGKVATLSTEPGSFLLGKEFYVPLCSLPLCSAVVDVAIQDYVADVVSELIYHNESLRSSEVTFVFPLDPHMAIYSFQACSEDAKVKAVLQDETQWLHKATAEKENFHYLQYGVEKSGEVFACFLGSLSPGKEMVVTLHYVQELSRKPDGAAQFVLPSTMHPYKTHYTCNCRTDKLHYSLLLTVSLQSPRGVADVQANCALTPLIYTAQDHSAAQVSLAGTPPNHHLELLVYYREPTAVSAVVEKGNPAATAGSLFGDSLVLVTLAPNIPDAKPGLCQSGEFIFVLDSSSLEHTQDPMLFLLKSLPLGCYFNIYCYGGTSEGIYPQSVEYTQDNLNEAMQHIPTTGSRLGDTDLLGTLRTIYNTPRPCGHARQLFIFMSGLPPDKEAIVAEVCRHRNSHRCFSFCFSTDSATLATALARETKGEAIYVSSDNAIVQVLKCLKQALKPVAEGVSLDWTLPSGLEVEVLGGTPQFIFQSQHIFLYAQIHGKEKNMKEASGVMTLQFSLDGQVLTHKIQFPLCPQGDGRMAGHRLAARYLLEKLLPEVASGSGDEPMQRAIEISLTSGIICPFTSYVGVRTSRRAPWYHGPLALLPPRQSFVPCKILLLRGSFNGTSCFPKTIWYPPSWHTALQESWIAIKQLTNGIANLFQQGAHKEAPKQMPPSISSLKYVDSTRFVLCSTISGPWMNDAIAECRELVALQNVDGSWTLSSDLASVLQVDEAEIKGKMPGEVMDPSFWATVLAVTWLQRHNRHCHEIYDLLEAKAVTWLCSQAVSQLDKCLEASNTLLGSTVNPSIFRL
SIO_010081: LOC104914549
subclass of: SO_0000673
so part of: LOC104914549
location: join(29108..29197,31264..31319,31696..31993,32099..32321,32658..32800,32955..33066,33496..33623,33773..33861,34362..34506,34838..34917,35405..35513,36418..36582,36724..36827,37128..37309,37474..37680,38145..38368,38482..38608,38802..38881)
location: region:29108-38881:1
so has part: feature:29108-29197:1:exon
so has part: feature:31264-31319:1:exon
so has part: feature:31696-31993:1:exon
so has part: feature:32099-32321:1:exon
so has part: feature:32658-32800:1:exon
so has part: feature:32955-33066:1:exon
so has part: feature:33496-33623:1:exon
so has part: feature:33773-33861:1:exon
so has part: feature:34362-34506:1:exon
so has part: feature:34838-34917:1:exon
so has part: feature:35405-35513:1:exon
so has part: feature:36418-36582:1:exon
so has part: feature:36724-36827:1:exon
so has part: feature:37128-37309:1:exon
so has part: feature:37474-37680:1:exon
so has part: feature:38145-38368:1:exon
so has part: feature:38482-38608:1:exon
so has part: feature:38802-38881:1:exon

XP_031412885.1
type: Protein
SIO_000068: ncbiprotein

position:38881:1
position: 38881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29108-29197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:31264-31319:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:31696-31993:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:32099-32321:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32658-32800:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32955-33066:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:33496-33623:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:33773-33861:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:34362-34506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:34838-34917:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:35405-35513:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:36418-36582:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:36724-36827:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:37128-37309:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:37474-37680:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:38145-38368:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:38482-38608:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:38802-38881:1:exon

DAD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 41328..44703
location: region:41328-44703:1
so has part: feature:41328-44703:1:exon
subclass of: SO_0000010

100547759
type: Gene
SIO_000068: ncbigene

position:41328:1
position: 41328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44703:1
position: 44703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41328-44703:1:exon

DAD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DAD1
product: defender against cell death 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003212988.3
SIO_010081: DAD1
subclass of: SO_0000673
so part of: DAD1
location: join(41328..42033,43860..44008,44505..44703)
location: region:41328-44703:1
so has part: feature:41328-42033:1:exon
so has part: feature:43860-44008:1:exon
so has part: feature:44505-44703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41328-42033:1:exon

position:42033:1
position: 42033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:43860-44008:1:exon

position:43860:1
position: 43860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44008:1
position: 44008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:44505-44703:1:exon

position:44505:1
position: 44505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DAD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DAD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1
translation: MPQKQTPGLGEKSQVPYWALQIKTGKTHTLRSHSAFCRTAGTPARQAPYKEHRQTATARPQLSPDKDGYGDWQASAHAPVRNTFQPIQHVVMRMRIISRKTSVPPFCEQDNCACALPLTRKWPGHAPALLCCVPEASPFCFRPPQLSWGGGTMSGAAGSGSAGSVGSVVRRFLAEYGSGTSSRLKVLDAYLLYVMLTGALQFGYCLGVGTFPFNSFLSGFISAVGSFILGVCLRIQINPQNKAEFQGISPERAFADFLFANTILHLVVINFVG
SIO_010081: DAD1
subclass of: SO_0000673
so part of: DAD1
location: join(41343..42033,43860..43990)
location: region:41343-43990:1
so has part: feature:41343-42033:1:exon
so has part: feature:43860-43990:1:exon

XP_003213036.2
type: Protein
SIO_000068: ncbiprotein

position:41343:1
position: 41343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43990:1
position: 43990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41343-42033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:43860-43990:1:exon

LOC109371103
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109371103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(44817..49802)
location: region:44817-49802:-1
so has part: feature:44817-49802:-1:exon
subclass of: SO_0000011

109371103
type: Gene
SIO_000068: ncbigene

position:44817:-1
position: 44817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49802:-1
position: 49802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44817-49802:-1:exon

LOC109371103
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109371103
product: uncharacterized LOC109371103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002121779.1
SIO_010081: LOC109371103
subclass of: SO_0000673
so part of: LOC109371103
location: complement(join(44817..45538,48699..49802))
location: region:44817-49802:-1
so has part: feature:48699-49802:-1:exon
so has part: feature:44817-45538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48699-49802:-1:exon

position:48699:-1
position: 48699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44817-45538:-1:exon

position:45538:-1
position: 45538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104914550
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51178..68083)
location: region:51178-68083:-1
so has part: feature:51178-68083:-1:exon
subclass of: SO_0000010

104914550
type: Gene
SIO_000068: ncbigene

position:51178:-1
position: 51178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68083:-1
position: 68083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51178-68083:-1:exon

LOC104914550
type: Constant Region
subclass of: SO_0001834
RO_0002162: 9103
gene: LOC104914550
standard name: M1-specific T cell receptor alpha chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
SIO_010081: LOC104914550
subclass of: SO_0000673
so part of: LOC104914550
location: complement(join(51178..51540,52015..52121,53177..53224,53661..53924,67972..68083))
location: region:51178-68083:-1
so has part: feature:67972-68083:-1:exon
so has part: feature:53661-53924:-1:exon
so has part: feature:53177-53224:-1:exon
so has part: feature:52015-52121:-1:exon
so has part: feature:51178-51540:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67972-68083:-1:exon

position:67972:-1
position: 67972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:53661-53924:-1:exon

position:53661:-1
position: 53661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53924:-1
position: 53924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:53177-53224:-1:exon

position:53177:-1
position: 53177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53224:-1
position: 53224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:52015-52121:-1:exon

position:52015:-1
position: 52015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52121:-1
position: 52121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:51178-51540:-1:exon

position:51540:-1
position: 51540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104914550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914550
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M1-specific T cell receptor alpha chain-like
SIO_010081: LOC104914550
subclass of: SO_0000673
so part of: LOC104914550
location: complement(join(51535..51540,52015..52121,53177..53224,53661..53924,67972..68068))
location: region:51535-68068:-1
so has part: feature:67972-68068:-1:exon
so has part: feature:53661-53924:-1:exon
so has part: feature:53177-53224:-1:exon
so has part: feature:52015-52121:-1:exon
so has part: feature:51535-51540:-1:exon

position:51535:-1
position: 51535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68068:-1
position: 68068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67972-68068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:53661-53924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:53177-53224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:52015-52121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:51535-51540:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 71314..71413
location: region:71314-71413:1
so has part: feature:71314-71413:1:region

position:71314:1
position: 71314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71413:1
position: 71413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71314-71413:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 72751..72850
location: region:72751-72850:1
so has part: feature:72751-72850:1:region

position:72751:1
position: 72751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72850:1
position: 72850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72751-72850:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 74744..74843
location: region:74744-74843:1
so has part: feature:74744-74843:1:region

position:74744:1
position: 74744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74843:1
position: 74843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74744-74843:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 78395..78494
location: region:78395-78494:1
so has part: feature:78395-78494:1:region

position:78395:1
position: 78395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78494:1
position: 78494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78395-78494:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 82560..82659
location: region:82560-82659:1
so has part: feature:82560-82659:1:region

position:82560:1
position: 82560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:82659:1
position: 82659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82560-82659:1:region

LOC100543858
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100543858
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 87932..88731
location: region:87932-88731:1
so has part: feature:87932-88731:1:exon
subclass of: SO_0000010

100543858
type: Gene
SIO_000068: ncbigene

position:87932:1
position: 87932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88731:1
position: 88731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87932-88731:1:exon

LOC100543858
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543858
product: feather keratin Cos1-2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 27% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003214174.2
SIO_010081: LOC100543858
subclass of: SO_0000673
so part of: LOC100543858
location: join(87932..88028,88405..88731)
location: region:87932-88731:1
so has part: feature:87932-88028:1:exon
so has part: feature:88405-88731:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87932-88028:1:exon

position:88028:1
position: 88028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88405-88731:1:exon

position:88405:1
position: 88405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100543858
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543858
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: feather keratin Cos1-2
translation: MPLDMGQXRTIIKGSPGPCLLIHYSSRLLLQNQVHIQTQVMSCCNPCVPCQPCGPTPLASSCNEPCVRQCQDSIIAIEPSPVVVILPGPILSSFPQNTVVGSSTSAAVGSILSCQGVPITSGGFDLSCISNRYCGRRCTPC
SIO_010081: LOC100543858
subclass of: SO_0000673
so part of: LOC100543858
location: join(87932..88028,88405..88731)
location: region:87932-88731:1
so has part: feature:87932-88028:1:exon
so has part: feature:88405-88731:1:exon

XP_003214222.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:87932-88028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88405-88731:1:exon

LOC100549140
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100549140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 108847..109602
location: region:108847-109602:1
so has part: feature:108847-109602:1:exon
subclass of: SO_0000010

100549140
type: Gene
SIO_000068: ncbigene

position:108847:1
position: 108847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109602:1
position: 109602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108847-109602:1:exon

LOC100549140
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100549140
product: feather beta keratin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003212994.2
SIO_010081: LOC100549140
subclass of: SO_0000673
so part of: LOC100549140
location: join(108847..108925,109295..109602)
location: region:108847-109602:1
so has part: feature:108847-108925:1:exon
so has part: feature:109295-109602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:108847-108925:1:exon

position:108925:1
position: 108925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109295-109602:1:exon

position:109295:1
position: 109295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100549140
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100549140
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather beta keratin-like
translation: MKDQYKRQPNSQLSHPLLLPHSPWEPDMSCYSQCVPCRPCGPTPLASSCNEPCVRQCQNSNVIIEPSPVVVTLPGPILSSFPQNTVVGSSTSAAVGSILSSEGVPITSGGFDLSGFGSRYCGRRCYPC
SIO_010081: LOC100549140
subclass of: SO_0000673
so part of: LOC100549140
location: join(108847..108925,109295..109602)
location: region:108847-109602:1
so has part: feature:108847-108925:1:exon
so has part: feature:109295-109602:1:exon

XP_003213042.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:108847-108925:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:109295-109602:1:exon

LOC109371095
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109371095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 117440..117754
location: region:117440-117754:1
so has part: feature:117440-117754:1:exon

109371095
type: Gene
SIO_000068: ncbigene

position:117440:1
position: 117440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117754:1
position: 117754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117440-117754:1:exon

LOC109371095
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC109371095
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109371095
subclass of: SO_0000673
so part of: LOC109371095
location: 117440..117754
location: region:117440-117754:1
so has part: feature:117440-117754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117440-117754:1:exon

LOC104914551
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(126263..126757)
location: region:126263-126757:-1
so has part: feature:126263-126757:-1:exon
subclass of: SO_0000010

104914551
type: Gene
SIO_000068: ncbigene

position:126263:-1
position: 126263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126757:-1
position: 126757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126263-126757:-1:exon

LOC104914551
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914551
product: feather keratin 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724428.2
SIO_010081: LOC104914551
subclass of: SO_0000673
so part of: LOC104914551
location: complement(join(126263..126506,126606..126757))
location: region:126263-126757:-1
so has part: feature:126606-126757:-1:exon
so has part: feature:126263-126506:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:126606-126757:-1:exon

position:126606:-1
position: 126606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:126263-126506:-1:exon

position:126506:-1
position: 126506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104914551
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914551
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin 1-like
translation: MSCYDQCVPRLQCRPCGPTPLGSSCNEPCVRQCQDSNVVIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSSEGVPISSGGFGLSGFGSGICGRRCFPC
SIO_010081: LOC104914551
subclass of: SO_0000673
so part of: LOC104914551
location: complement(join(126344..126506,126606..126757))
location: region:126344-126757:-1
so has part: feature:126606-126757:-1:exon
so has part: feature:126344-126506:-1:exon

XP_010722730.1
type: Protein
SIO_000068: ncbiprotein

position:126344:-1
position: 126344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:126606-126757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:126344-126506:-1:exon

LOC100549445
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100549445
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(131090..131419)
location: region:131090-131419:-1
so has part: feature:131090-131419:-1:exon

100549445
type: Gene
SIO_000068: ncbigene

position:131090:-1
position: 131090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131419:-1
position: 131419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131090-131419:-1:exon

LOC100549445
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC100549445
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC100549445
subclass of: SO_0000673
so part of: LOC100549445
location: complement(131090..131419)
location: region:131090-131419:-1
so has part: feature:131090-131419:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131090-131419:-1:exon

LOC100548829
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100548829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(139598..139978)
location: region:139598-139978:-1
so has part: feature:139598-139978:-1:exon

100548829
type: Gene
SIO_000068: ncbigene

position:139598:-1
position: 139598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139978:-1
position: 139978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139598-139978:-1:exon

LOC100548829
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC100548829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 26% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100548829
subclass of: SO_0000673
so part of: LOC100548829
location: complement(139598..139978)
location: region:139598-139978:-1
so has part: feature:139598-139978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139598-139978:-1:exon

LOC100548675
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100548675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 141772..142086
location: region:141772-142086:1
so has part: feature:141772-142086:1:exon
subclass of: SO_0000010

100548675
type: Gene
SIO_000068: ncbigene

position:141772:1
position: 141772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142086:1
position: 142086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141772-142086:1:exon

LOC100548675
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100548675
product: feather keratin 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins
transcript id: XM_003212992.1
SIO_010081: LOC100548675
subclass of: SO_0000673
so part of: LOC100548675
location: 141772..142086
location: region:141772-142086:1
so has part: feature:141772-142086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141772-142086:1:exon

LOC100548675
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100548675
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: feather keratin 1-like
translation: MSCYDQCVPRLPCQPCGPTPLGSSCNEPCVRQCQDSNVFIQPSPVVVTLPGPILSSFPQNTAVGSSTSAAVGSILSSEGVPISSGGFGLSGFGSRFSGRRFFPC
SIO_010081: LOC100548675
subclass of: SO_0000673
so part of: LOC100548675
location: 141772..142086
location: region:141772-142086:1
so has part: feature:141772-142086:1:exon

XP_003213040.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:141772-142086:1:exon

LOC100548520
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100548520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 151879..163201
location: region:151879-163201:1
so has part: feature:151879-163201:1:exon
subclass of: SO_0000010

100548520
type: Gene
SIO_000068: ncbigene

position:151879:1
position: 151879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163201:1
position: 163201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151879-163201:1:exon

LOC100548520
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100548520
product: gametocyte-specific factor 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_010724429.3
SIO_010081: LOC100548520
subclass of: SO_0000673
so part of: LOC100548520
location: join(151879..152062,157234..157325,158670..158796,159732..159818,160261..160321,161214..161302,162560..163201)
location: region:151879-163201:1
so has part: feature:151879-152062:1:exon
so has part: feature:157234-157325:1:exon
so has part: feature:158670-158796:1:exon
so has part: feature:159732-159818:1:exon
so has part: feature:160261-160321:1:exon
so has part: feature:161214-161302:1:exon
so has part: feature:162560-163201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151879-152062:1:exon

position:152062:1
position: 152062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157234-157325:1:exon

position:157234:1
position: 157234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157325:1
position: 157325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158670-158796:1:exon

position:158670:1
position: 158670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158796:1
position: 158796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:159732-159818:1:exon

position:159732:1
position: 159732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159818:1
position: 159818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:160261-160321:1:exon

position:160261:1
position: 160261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160321:1
position: 160321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:161214-161302:1:exon

position:161214:1
position: 161214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161302:1
position: 161302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162560-163201:1:exon

position:162560:1
position: 162560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100548520
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100548520
product: gametocyte-specific factor 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_010724430.3
SIO_010081: LOC100548520
subclass of: SO_0000673
so part of: LOC100548520
location: join(151879..152062,157234..157325,158670..158796,159732..159818,160261..160321,161220..161302,162560..163201)
location: region:151879-163201:1
so has part: feature:151879-152062:1:exon
so has part: feature:157234-157325:1:exon
so has part: feature:158670-158796:1:exon
so has part: feature:159732-159818:1:exon
so has part: feature:160261-160321:1:exon
so has part: feature:161220-161302:1:exon
so has part: feature:162560-163201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151879-152062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157234-157325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158670-158796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159732-159818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160261-160321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161220-161302:1:exon

position:161220:1
position: 161220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162560-163201:1:exon

LOC100548520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100548520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like isoform X1
translation: MEVEDDLDDPERLIQCPYNKQHQIRACRFPYHLVKCRKSHPEVAKLLATCPFNARHLVPRADLVDHISKCRDKGFIEHDIAHCSSGFQRDEVNAVSTWQAPPCDEDWETELLEQPNSPFVWGMTNSGINSCSVSSGQKNYLPSSVRAPESSPYAASWKD
SIO_010081: LOC100548520
subclass of: SO_0000673
so part of: LOC100548520
location: join(152041..152062,157234..157325,158670..158796,159732..159818,160261..160321,161214..161302,162560..162561)
location: region:152041-162561:1
so has part: feature:152041-152062:1:exon
so has part: feature:157234-157325:1:exon
so has part: feature:158670-158796:1:exon
so has part: feature:159732-159818:1:exon
so has part: feature:160261-160321:1:exon
so has part: feature:161214-161302:1:exon
so has part: feature:162560-162561:1:exon

XP_010722731.1
type: Protein
SIO_000068: ncbiprotein

position:152041:1
position: 152041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162561:1
position: 162561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152041-152062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157234-157325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158670-158796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159732-159818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160261-160321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161214-161302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162560-162561:1:exon

LOC100548520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100548520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1-like isoform X2
translation: MEVEDDLDDPERLIQCPYNKQHQIRACRFPYHLVKCRKSHPEVAKLLATCPFNARHLVPRADLVDHISKCRDKGFIEHDIAHCSSGFQRDEVNAVSTWQAPPCDEDWETELLEQPNSPFVWGMTNSGINSVSSGQKNYLPSSVRAPESSPYAASWKD
SIO_010081: LOC100548520
subclass of: SO_0000673
so part of: LOC100548520
location: join(152041..152062,157234..157325,158670..158796,159732..159818,160261..160321,161220..161302,162560..162561)
location: region:152041-162561:1
so has part: feature:152041-152062:1:exon
so has part: feature:157234-157325:1:exon
so has part: feature:158670-158796:1:exon
so has part: feature:159732-159818:1:exon
so has part: feature:160261-160321:1:exon
so has part: feature:161220-161302:1:exon
so has part: feature:162560-162561:1:exon

XP_010722732.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:152041-152062:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157234-157325:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158670-158796:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:159732-159818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:160261-160321:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:161220-161302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162560-162561:1:exon

GOSR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GOSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(168759..183157)
location: region:168759-183157:-1
so has part: feature:168759-183157:-1:exon
subclass of: SO_0000010

100548369
type: Gene
SIO_000068: ncbigene

position:168759:-1
position: 168759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183157:-1
position: 183157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168759-183157:-1:exon

GOSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GOSR2
product: golgi SNAP receptor complex member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XM_019623363.2
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(168759..171943,176121..176253,177363..177471,180559..180623,183052..183157))
location: region:168759-183157:-1
so has part: feature:183052-183157:-1:exon
so has part: feature:180559-180623:-1:exon
so has part: feature:177363-177471:-1:exon
so has part: feature:176121-176253:-1:exon
so has part: feature:168759-171943:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:183052-183157:-1:exon

position:183052:-1
position: 183052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:180559-180623:-1:exon

position:180559:-1
position: 180559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180623:-1
position: 180623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:177363-177471:-1:exon

position:177363:-1
position: 177363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177471:-1
position: 177471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176121-176253:-1:exon

position:176121:-1
position: 176121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:176253:-1
position: 176253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:168759-171943:-1:exon

position:171943:-1
position: 171943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOSR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GOSR2
product: golgi SNAP receptor complex member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010724431.3
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(168759..171943,173921..174061,176121..176253,177363..177471,180559..180623,183052..183156))
location: region:168759-183156:-1
so has part: feature:183052-183156:-1:exon
so has part: feature:180559-180623:-1:exon
so has part: feature:177363-177471:-1:exon
so has part: feature:176121-176253:-1:exon
so has part: feature:173921-174061:-1:exon
so has part: feature:168759-171943:-1:exon

position:183156:-1
position: 183156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183052-183156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180559-180623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177363-177471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176121-176253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173921-174061:-1:exon

position:173921:-1
position: 173921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:174061:-1
position: 174061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:168759-171943:-1:exon

GOSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GOSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi SNAP receptor complex member 2 isoform X2
translation: MEGLYHQTNKQVHEVQSYMGRLETSDKESVHLVENEIQARIDKVFSNLERLEILSSKEPPNKRQNAKLRVDQLKYDVQHLQTALRNFQHRRYIREQQERQREELLARTFTTNGTQKKILDVANTLGLSNTVMRLIEKRAFQDKYLMIGGMIVTCVIMFLVVQYLT
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(171782..171943,176121..176253,177363..177471,180559..180623,183052..183080))
location: region:171782-183080:-1
so has part: feature:183052-183080:-1:exon
so has part: feature:180559-180623:-1:exon
so has part: feature:177363-177471:-1:exon
so has part: feature:176121-176253:-1:exon
so has part: feature:171782-171943:-1:exon

XP_019478908.1
type: Protein
SIO_000068: ncbiprotein

position:171782:-1
position: 171782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183080:-1
position: 183080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183052-183080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180559-180623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177363-177471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176121-176253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:171782-171943:-1:exon

GOSR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GOSR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Golgi SNAP receptor complex member 2 isoform X1
translation: MEGLYHQTNKQVHEVQSYMGRLETSDKESVHLVENEIQARIDKVFSNLERLEILSSKEPPNKRQNAKLRVDQLKYDVQHLQTALRNFQHRRYIREQQERQREELLARTFTTNDSDTTIPIDETLQFNESLQNAHRGMDDLIGSGTNILQGLRDQRVTLKGTQKKILDVANTLGLSNTVMRLIEKRAFQDKYLMIGGMIVTCVIMFLVVQYLT
SIO_010081: GOSR2
subclass of: SO_0000673
so part of: GOSR2
location: complement(join(171782..171943,173921..174061,176121..176253,177363..177471,180559..180623,183052..183080))
location: region:171782-183080:-1
so has part: feature:183052-183080:-1:exon
so has part: feature:180559-180623:-1:exon
so has part: feature:177363-177471:-1:exon
so has part: feature:176121-176253:-1:exon
so has part: feature:173921-174061:-1:exon
so has part: feature:171782-171943:-1:exon

XP_010722733.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:183052-183080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180559-180623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:177363-177471:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176121-176253:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173921-174061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:171782-171943:-1:exon

WNT9B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: WNT9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(206687..214308)
location: region:206687-214308:-1
so has part: feature:206687-214308:-1:exon
subclass of: SO_0000010

100549597
type: Gene
SIO_000068: ncbigene

position:206687:-1
position: 206687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214308:-1
position: 214308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206687-214308:-1:exon

WNT9B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: WNT9B
product: Wnt family member 9B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031557041.1
SIO_010081: WNT9B
subclass of: SO_0000673
so part of: WNT9B
location: complement(join(206687..209019,209799..210064,214059..214308))
location: region:206687-214308:-1
so has part: feature:214059-214308:-1:exon
so has part: feature:209799-210064:-1:exon
so has part: feature:206687-209019:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:214059-214308:-1:exon

position:214059:-1
position: 214059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:209799-210064:-1:exon

position:209799:-1
position: 209799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210064:-1
position: 210064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206687-209019:-1:exon

position:209019:-1
position: 209019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WNT9B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: WNT9B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-9b
translation: MKQCDLLKLSRKQKRLCRREPGLAETLRDAIRLGIMECQFQFRSERWNCSLEGRTSLLKRGFKETAFLYAVSSAALTHSLARACSAGRMERCTCDDSPDLENRKAWQWGVCGDNLKYSTKFLKKFLGQKRIGKDLRAKVDIHNTNVGIKAVKNGLKTTCKCHGVSGSCAVRTCWKQLSPFHEVGRLLKLRYDDAVKVFSTTNDAVGHSELASPQRHSHSTKHHASPRATDLVYVEDSPSFCRPSKYSLGTAGRTCSREGNCDSMCCGRGYNTQSRLVTFSCHCQVQWCCYVECQQCMQEEVVYSCKQ
SIO_010081: WNT9B
subclass of: SO_0000673
so part of: WNT9B
location: complement(join(208543..209019,209799..210064,214059..214239))
location: region:208543-214239:-1
so has part: feature:214059-214239:-1:exon
so has part: feature:209799-210064:-1:exon
so has part: feature:208543-209019:-1:exon

XP_031412901.1
type: Protein
SIO_000068: ncbiprotein

position:208543:-1
position: 208543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:214239:-1
position: 214239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214059-214239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209799-210064:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:208543-209019:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 235216..235315
location: region:235216-235315:1
so has part: feature:235216-235315:1:region

position:235216:1
position: 235216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235315:1
position: 235315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235216-235315:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 237498..237597
location: region:237498-237597:1
so has part: feature:237498-237597:1:region

position:237498:1
position: 237498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237597:1
position: 237597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237498-237597:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 237978..238077
location: region:237978-238077:1
so has part: feature:237978-238077:1:region

position:237978:1
position: 237978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238077:1
position: 238077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:237978-238077:1:region

WNT3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: WNT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 247547..269848
location: region:247547-269848:1
so has part: feature:247547-269848:1:exon
subclass of: SO_0000010

100549905
type: Gene
SIO_000068: ncbigene

position:247547:1
position: 247547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269848:1
position: 269848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247547-269848:1:exon

WNT3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: WNT3
product: Wnt family member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724432.2
SIO_010081: WNT3
subclass of: SO_0000673
so part of: WNT3
location: join(247547..247692,261596..261837,267134..267399,268701..269848)
location: region:247547-269848:1
so has part: feature:247547-247692:1:exon
so has part: feature:261596-261837:1:exon
so has part: feature:267134-267399:1:exon
so has part: feature:268701-269848:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247547-247692:1:exon

position:247692:1
position: 247692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:261596-261837:1:exon

position:261596:1
position: 261596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261837:1
position: 261837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:267134-267399:1:exon

position:267134:1
position: 267134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267399:1
position: 267399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:268701-269848:1:exon

position:268701:1
position: 268701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNT3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: WNT3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Wnt-3b
translation: MDYHLLGLILSFLFNGTKVLAGYPIWWSLALGQQYSSLGSQPILCGSIPGLVPKQLRFCRNYIEIMPSVAEGVKLGIQECQHQFRGRRWNCTTIDDSLAIFGPVLDKATRESAFVHAIASAGVAFAVTRSCAEGTSTICGCDSHHKGPPGEGWKWGGCSEDADFGVLVSREFADARENRPDARSAMNRHNNEAGRTTILDHMHLKCKCHGLSGSCEVKTCWWAQPDFRAIGDYLKDKYDSASEMVVEKHRESRGWVETLRAKYALFKPPTERDLVYYENSPNFCEPNPETGSFGTRDRTCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCIFHWCCYVSCQECIRVYDVHTCK
SIO_010081: WNT3
subclass of: SO_0000673
so part of: WNT3
location: join(247613..247692,261596..261837,267134..267399,268701..269180)
location: region:247613-269180:1
so has part: feature:247613-247692:1:exon
so has part: feature:261596-261837:1:exon
so has part: feature:267134-267399:1:exon
so has part: feature:268701-269180:1:exon

XP_010722734.1
type: Protein
SIO_000068: ncbiprotein

position:247613:1
position: 247613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269180:1
position: 269180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247613-247692:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:261596-261837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267134-267399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:268701-269180:1:exon

NSF
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NSF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(271069..332771)
location: region:271069-332771:-1
so has part: feature:271069-332771:-1:exon
subclass of: SO_0000010

100550059
type: Gene
SIO_000068: ncbigene

position:271069:-1
position: 271069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332771:-1
position: 332771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271069-332771:-1:exon

NSF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NSF
product: N-ethylmaleimide sensitive factor, vesicle fusing ATPase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_019623365.2
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(271069..272550,273067..273122,278436..278549,279075..279209,285383..285462,285617..285683,286860..286993,287552..287708,287907..288002,290576..290763,291504..291578,291852..292017,293786..293985,303902..304057,307225..307300,307910..308017,308582..308748,319297..319382,332667..332771))
location: region:271069-332771:-1
so has part: feature:332667-332771:-1:exon
so has part: feature:319297-319382:-1:exon
so has part: feature:308582-308748:-1:exon
so has part: feature:307910-308017:-1:exon
so has part: feature:307225-307300:-1:exon
so has part: feature:303902-304057:-1:exon
so has part: feature:293786-293985:-1:exon
so has part: feature:291852-292017:-1:exon
so has part: feature:291504-291578:-1:exon
so has part: feature:290576-290763:-1:exon
so has part: feature:287907-288002:-1:exon
so has part: feature:287552-287708:-1:exon
so has part: feature:286860-286993:-1:exon
so has part: feature:285617-285683:-1:exon
so has part: feature:285383-285462:-1:exon
so has part: feature:279075-279209:-1:exon
so has part: feature:278436-278549:-1:exon
so has part: feature:273067-273122:-1:exon
so has part: feature:271069-272550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332667-332771:-1:exon

position:332667:-1
position: 332667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:319297-319382:-1:exon

position:319297:-1
position: 319297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319382:-1
position: 319382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308582-308748:-1:exon

position:308582:-1
position: 308582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308748:-1
position: 308748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:307910-308017:-1:exon

position:307910:-1
position: 307910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:308017:-1
position: 308017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:307225-307300:-1:exon

position:307225:-1
position: 307225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307300:-1
position: 307300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:303902-304057:-1:exon

position:303902:-1
position: 303902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304057:-1
position: 304057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:293786-293985:-1:exon

position:293786:-1
position: 293786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293985:-1
position: 293985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:291852-292017:-1:exon

position:291852:-1
position: 291852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292017:-1
position: 292017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291504-291578:-1:exon

position:291504:-1
position: 291504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291578:-1
position: 291578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:290576-290763:-1:exon

position:290576:-1
position: 290576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290763:-1
position: 290763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:287907-288002:-1:exon

position:287907:-1
position: 287907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288002:-1
position: 288002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:287552-287708:-1:exon

position:287552:-1
position: 287552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287708:-1
position: 287708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:286860-286993:-1:exon

position:286860:-1
position: 286860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286993:-1
position: 286993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:285617-285683:-1:exon

position:285617:-1
position: 285617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285683:-1
position: 285683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:285383-285462:-1:exon

position:285383:-1
position: 285383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285462:-1
position: 285462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:279075-279209:-1:exon

position:279075:-1
position: 279075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279209:-1
position: 279209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:278436-278549:-1:exon

position:278436:-1
position: 278436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278549:-1
position: 278549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:273067-273122:-1:exon

position:273067:-1
position: 273067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273122:-1
position: 273122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:271069-272550:-1:exon

position:272550:-1
position: 272550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NSF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NSF
product: N-ethylmaleimide sensitive factor, vesicle fusing ATPase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 207 samples with support for all annotated introns
transcript id: XM_010724433.3
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(271069..272550,273067..273122,278436..278549,279075..279209,285383..285462,285617..285683,286860..286993,287552..287708,287907..288002,290576..290763,291504..291578,291852..292017,293786..293985,303902..304057,307225..307300,307910..308017,308582..308748,312139..312178,314025..314124,319297..319382,332667..332771))
location: region:271069-332771:-1
so has part: feature:332667-332771:-1:exon
so has part: feature:319297-319382:-1:exon
so has part: feature:314025-314124:-1:exon
so has part: feature:312139-312178:-1:exon
so has part: feature:308582-308748:-1:exon
so has part: feature:307910-308017:-1:exon
so has part: feature:307225-307300:-1:exon
so has part: feature:303902-304057:-1:exon
so has part: feature:293786-293985:-1:exon
so has part: feature:291852-292017:-1:exon
so has part: feature:291504-291578:-1:exon
so has part: feature:290576-290763:-1:exon
so has part: feature:287907-288002:-1:exon
so has part: feature:287552-287708:-1:exon
so has part: feature:286860-286993:-1:exon
so has part: feature:285617-285683:-1:exon
so has part: feature:285383-285462:-1:exon
so has part: feature:279075-279209:-1:exon
so has part: feature:278436-278549:-1:exon
so has part: feature:273067-273122:-1:exon
so has part: feature:271069-272550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332667-332771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319297-319382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314025-314124:-1:exon

position:314025:-1
position: 314025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314124:-1
position: 314124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:312139-312178:-1:exon

position:312139:-1
position: 312139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312178:-1
position: 312178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:308582-308748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307910-308017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307225-307300:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303902-304057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293786-293985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291852-292017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:291504-291578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:290576-290763:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287907-288002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287552-287708:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:286860-286993:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:285617-285683:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:285383-285462:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:279075-279209:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:278436-278549:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273067-273122:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:271069-272550:-1:exon

NSF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NSF
product: N-ethylmaleimide sensitive factor, vesicle fusing ATPase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_019623366.2
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(271069..272550,273067..273122,278436..278549,279075..279209,285383..285462,285617..285683,286860..286993,287552..287708,287907..288002,290576..290763,291504..291578,291852..292017,293786..293985,303902..304057,307225..307300,307910..308017,308582..308748,319297..319382,330521..330544))
location: region:271069-330544:-1
so has part: feature:330521-330544:-1:exon
so has part: feature:319297-319382:-1:exon
so has part: feature:308582-308748:-1:exon
so has part: feature:307910-308017:-1:exon
so has part: feature:307225-307300:-1:exon
so has part: feature:303902-304057:-1:exon
so has part: feature:293786-293985:-1:exon
so has part: feature:291852-292017:-1:exon
so has part: feature:291504-291578:-1:exon
so has part: feature:290576-290763:-1:exon
so has part: feature:287907-288002:-1:exon
so has part: feature:287552-287708:-1:exon
so has part: feature:286860-286993:-1:exon
so has part: feature:285617-285683:-1:exon
so has part: feature:285383-285462:-1:exon
so has part: feature:279075-279209:-1:exon
so has part: feature:278436-278549:-1:exon
so has part: feature:273067-273122:-1:exon
so has part: feature:271069-272550:-1:exon

position:330544:-1
position: 330544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330521-330544:-1:exon

position:330521:-1
position: 330521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:319297-319382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308582-308748:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307910-308017:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307225-307300:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303902-304057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293786-293985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291852-292017:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291504-291578:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:290576-290763:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287907-288002:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:287552-287708:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:286860-286993:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:285617-285683:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:285383-285462:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:279075-279209:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:278436-278549:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:273067-273122:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:271069-272550:-1:exon

NSF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NSF
product: N-ethylmaleimide sensitive factor, vesicle fusing ATPase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_019623364.2
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(271069..272550,273067..273122,278436..278549,279075..279209,285383..285462,285617..285683,286860..286993,287552..287708,287907..288002,290576..290763,291504..291578,291852..292017,293786..293985,303902..304057,307225..307300,307910..308017,308582..308748,312139..312178,314025..314124,319297..319382,330521..330544))
location: region:271069-330544:-1
so has part: feature:330521-330544:-1:exon
so has part: feature:319297-319382:-1:exon
so has part: feature:314025-314124:-1:exon
so has part: feature:312139-312178:-1:exon
so has part: feature:308582-308748:-1:exon
so has part: feature:307910-308017:-1:exon
so has part: feature:307225-307300:-1:exon
so has part: feature:303902-304057:-1:exon
so has part: feature:293786-293985:-1:exon
so has part: feature:291852-292017:-1:exon
so has part: feature:291504-291578:-1:exon
so has part: feature:290576-290763:-1:exon
so has part: feature:287907-288002:-1:exon
so has part: feature:287552-287708:-1:exon
so has part: feature:286860-286993:-1:exon
so has part: feature:285617-285683:-1:exon
so has part: feature:285383-285462:-1:exon
so has part: feature:279075-279209:-1:exon
so has part: feature:278436-278549:-1:exon
so has part: feature:273067-273122:-1:exon
so has part: feature:271069-272550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330521-330544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319297-319382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314025-314124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312139-312178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308582-308748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307910-308017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307225-307300:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303902-304057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293786-293985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291852-292017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:291504-291578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:290576-290763:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287907-288002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287552-287708:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:286860-286993:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:285617-285683:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:285383-285462:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:279075-279209:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:278436-278549:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273067-273122:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:271069-272550:-1:exon

NSF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NSF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-fusing ATPase isoform X1
translation: MAGRPMQAARCPTDELSLTNCAVVNEADFPSGQHVVVKTSPNHKYIFTLRTHPSVVPGNIAFSLPQRKWAGLSIGQEIDVSLYTFDKSKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNSQAFSVGQQLVFSFNDKLFGLLVKSMEGMDPSILKGESGGSKKQKIEVGLVFGNSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASNKVEVDMEKAESLRVTRGDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKSVWIGIKKLLMLIEMSLQMDPEYRVKKFLALLREEGTVP
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(272541..272550,273067..273122,278436..278549,279075..279209,285383..285462,285617..285683,286860..286993,287552..287708,287907..288002,290576..290763,291504..291578,291852..292017,293786..293985,303902..304057,307225..307300,307910..308017,308582..308748,312139..312178,314025..314124,319297..319382,332667..332678))
location: region:272541-332678:-1
so has part: feature:332667-332678:-1:exon
so has part: feature:319297-319382:-1:exon
so has part: feature:314025-314124:-1:exon
so has part: feature:312139-312178:-1:exon
so has part: feature:308582-308748:-1:exon
so has part: feature:307910-308017:-1:exon
so has part: feature:307225-307300:-1:exon
so has part: feature:303902-304057:-1:exon
so has part: feature:293786-293985:-1:exon
so has part: feature:291852-292017:-1:exon
so has part: feature:291504-291578:-1:exon
so has part: feature:290576-290763:-1:exon
so has part: feature:287907-288002:-1:exon
so has part: feature:287552-287708:-1:exon
so has part: feature:286860-286993:-1:exon
so has part: feature:285617-285683:-1:exon
so has part: feature:285383-285462:-1:exon
so has part: feature:279075-279209:-1:exon
so has part: feature:278436-278549:-1:exon
so has part: feature:273067-273122:-1:exon
so has part: feature:272541-272550:-1:exon

XP_010722735.1
type: Protein
SIO_000068: ncbiprotein

position:272541:-1
position: 272541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332678:-1
position: 332678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:332667-332678:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319297-319382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314025-314124:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312139-312178:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:308582-308748:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307910-308017:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307225-307300:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303902-304057:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:293786-293985:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291852-292017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:291504-291578:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:290576-290763:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287907-288002:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:287552-287708:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:286860-286993:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:285617-285683:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:285383-285462:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:279075-279209:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:278436-278549:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273067-273122:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:272541-272550:-1:exon

NSF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NSF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-fusing ATPase isoform X2
translation: MQAARCPTDELSLTNCAVVNEADFPSGQHVVVKTSPNHKYIFTLRTHPSVVPGNIAFSLPQRKWAGLSIGQEIDVSLYTFDKSKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNSQAFSVGQQLVFSFNDKLFGLLVKSMEGMDPSILKGESGGSKKQKIEVGLVFGNSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASNKVEVDMEKAESLRVTRGDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKSVWIGIKKLLMLIEMSLQMDPEYRVKKFLALLREEGTVP
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(272541..272550,273067..273122,278436..278549,279075..279209,285383..285462,285617..285683,286860..286993,287552..287708,287907..288002,290576..290763,291504..291578,291852..292017,293786..293985,303902..304057,307225..307300,307910..308017,308582..308748,312139..312178,314025..314124,319297..319379))
location: region:272541-319379:-1
so has part: feature:319297-319379:-1:exon
so has part: feature:314025-314124:-1:exon
so has part: feature:312139-312178:-1:exon
so has part: feature:308582-308748:-1:exon
so has part: feature:307910-308017:-1:exon
so has part: feature:307225-307300:-1:exon
so has part: feature:303902-304057:-1:exon
so has part: feature:293786-293985:-1:exon
so has part: feature:291852-292017:-1:exon
so has part: feature:291504-291578:-1:exon
so has part: feature:290576-290763:-1:exon
so has part: feature:287907-288002:-1:exon
so has part: feature:287552-287708:-1:exon
so has part: feature:286860-286993:-1:exon
so has part: feature:285617-285683:-1:exon
so has part: feature:285383-285462:-1:exon
so has part: feature:279075-279209:-1:exon
so has part: feature:278436-278549:-1:exon
so has part: feature:273067-273122:-1:exon
so has part: feature:272541-272550:-1:exon

XP_019478909.1
type: Protein
SIO_000068: ncbiprotein

position:319379:-1
position: 319379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319297-319379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314025-314124:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312139-312178:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:308582-308748:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:307910-308017:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307225-307300:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303902-304057:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:293786-293985:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291852-292017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:291504-291578:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:290576-290763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:287907-288002:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:287552-287708:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:286860-286993:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:285617-285683:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:285383-285462:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:279075-279209:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:278436-278549:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:273067-273122:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:272541-272550:-1:exon

NSF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NSF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-fusing ATPase isoform X3
translation: MRLTSLLDISLYTFDKSKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNSQAFSVGQQLVFSFNDKLFGLLVKSMEGMDPSILKGESGGSKKQKIEVGLVFGNSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASNKVEVDMEKAESLRVTRGDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKSVWIGIKKLLMLIEMSLQMDPEYRVKKFLALLREEGTVP
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(272541..272550,273067..273122,278436..278549,279075..279209,285383..285462,285617..285683,286860..286993,287552..287708,287907..288002,290576..290763,291504..291578,291852..292017,293786..293985,303902..304057,307225..307300,307910..308017,308582..308748,319297..319321))
location: region:272541-319321:-1
so has part: feature:319297-319321:-1:exon
so has part: feature:308582-308748:-1:exon
so has part: feature:307910-308017:-1:exon
so has part: feature:307225-307300:-1:exon
so has part: feature:303902-304057:-1:exon
so has part: feature:293786-293985:-1:exon
so has part: feature:291852-292017:-1:exon
so has part: feature:291504-291578:-1:exon
so has part: feature:290576-290763:-1:exon
so has part: feature:287907-288002:-1:exon
so has part: feature:287552-287708:-1:exon
so has part: feature:286860-286993:-1:exon
so has part: feature:285617-285683:-1:exon
so has part: feature:285383-285462:-1:exon
so has part: feature:279075-279209:-1:exon
so has part: feature:278436-278549:-1:exon
so has part: feature:273067-273122:-1:exon
so has part: feature:272541-272550:-1:exon

XP_019478910.1
type: Protein
SIO_000068: ncbiprotein

position:319321:-1
position: 319321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319297-319321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308582-308748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307910-308017:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307225-307300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303902-304057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293786-293985:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291852-292017:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291504-291578:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290576-290763:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287907-288002:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287552-287708:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286860-286993:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:285617-285683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:285383-285462:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:279075-279209:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:278436-278549:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:273067-273122:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272541-272550:-1:exon

NSF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NSF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-fusing ATPase isoform X3
translation: MRLTSLLDISLYTFDKSKQCIGTMTIEIDFLQKKNIDSNPYDTDKMAAEFIQQFNSQAFSVGQQLVFSFNDKLFGLLVKSMEGMDPSILKGESGGSKKQKIEVGLVFGNSQVAFEKAENSSLNLIGKSKTKENRQSIINPDWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLMARQIGKMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGVHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKIDGVEQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRFQILHIHTVRMREHQLLAEDVDIAELAVETKNFSGAELEGLVRAAQSTAMNRHIKASNKVEVDMEKAESLRVTRGDFFASLENDIKPAFGTNQEDYASYIMNGIIKWGDPVTRVLDDGELLVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKICSPDKMIGFSETAKCQAMKKIFDDAYKSQLSCVVVDDIERLLDYVPIGPRFSNLVLQALLVLLKKAPPQGRKLLIIGTTSRKDVLQEMEMLNAFSTTIHVPNIATGEQLMEALELLGNFKDKERSTIAQNVKGKSVWIGIKKLLMLIEMSLQMDPEYRVKKFLALLREEGTVP
SIO_010081: NSF
subclass of: SO_0000673
so part of: NSF
location: complement(join(272541..272550,273067..273122,278436..278549,279075..279209,285383..285462,285617..285683,286860..286993,287552..287708,287907..288002,290576..290763,291504..291578,291852..292017,293786..293985,303902..304057,307225..307300,307910..308017,308582..308748,319297..319321))
location: region:272541-319321:-1
so has part: feature:319297-319321:-1:exon
so has part: feature:308582-308748:-1:exon
so has part: feature:307910-308017:-1:exon
so has part: feature:307225-307300:-1:exon
so has part: feature:303902-304057:-1:exon
so has part: feature:293786-293985:-1:exon
so has part: feature:291852-292017:-1:exon
so has part: feature:291504-291578:-1:exon
so has part: feature:290576-290763:-1:exon
so has part: feature:287907-288002:-1:exon
so has part: feature:287552-287708:-1:exon
so has part: feature:286860-286993:-1:exon
so has part: feature:285617-285683:-1:exon
so has part: feature:285383-285462:-1:exon
so has part: feature:279075-279209:-1:exon
so has part: feature:278436-278549:-1:exon
so has part: feature:273067-273122:-1:exon
so has part: feature:272541-272550:-1:exon

XP_019478911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:319297-319321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:308582-308748:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:307910-308017:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:307225-307300:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:303902-304057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293786-293985:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291852-292017:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291504-291578:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:290576-290763:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:287907-288002:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:287552-287708:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:286860-286993:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:285617-285683:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:285383-285462:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:279075-279209:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:278436-278549:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:273067-273122:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272541-272550:-1:exon

MEIOC
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MEIOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 336645..354306
location: region:336645-354306:1
so has part: feature:336645-354306:1:exon
subclass of: SO_0000010

100550213
type: Gene
SIO_000068: ncbigene

position:336645:1
position: 336645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354306:1
position: 354306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336645-354306:1:exon

MEIOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MEIOC
product: meiosis specific with coiled-coil domain, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031557043.1
SIO_010081: MEIOC
subclass of: SO_0000673
so part of: MEIOC
location: join(336645..336721,339046..339168,340710..340867,340982..341086,342444..344259,345442..345576,349162..349342,352568..354168)
location: region:336645-354168:1
so has part: feature:336645-336721:1:exon
so has part: feature:339046-339168:1:exon
so has part: feature:340710-340867:1:exon
so has part: feature:340982-341086:1:exon
so has part: feature:342444-344259:1:exon
so has part: feature:345442-345576:1:exon
so has part: feature:349162-349342:1:exon
so has part: feature:352568-354168:1:exon

position:354168:1
position: 354168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336645-336721:1:exon

position:336721:1
position: 336721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339046-339168:1:exon

position:339046:1
position: 339046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339168:1
position: 339168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:340710-340867:1:exon

position:340710:1
position: 340710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340867:1
position: 340867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:340982-341086:1:exon

position:340982:1
position: 340982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341086:1
position: 341086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:342444-344259:1:exon

position:342444:1
position: 342444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344259:1
position: 344259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:345442-345576:1:exon

position:345442:1
position: 345442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345576:1
position: 345576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:349162-349342:1:exon

position:349162:1
position: 349162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349342:1
position: 349342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:352568-354168:1:exon

position:352568:1
position: 352568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEIOC
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: MEIOC
product: meiosis specific with coiled-coil domain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002121780.2
SIO_010081: MEIOC
so part of: MEIOC
location: join(336732..336829,339046..339168,340710..340867,340982..341086,342444..344259,345442..345576,349162..349342,352568..352818,354184..354306)
location: region:336732-354306:1
so has part: feature:336732-336829:1:exon
so has part: feature:339046-339168:1:exon
so has part: feature:340710-340867:1:exon
so has part: feature:340982-341086:1:exon
so has part: feature:342444-344259:1:exon
so has part: feature:345442-345576:1:exon
so has part: feature:349162-349342:1:exon
so has part: feature:352568-352818:1:exon
so has part: feature:354184-354306:1:exon

position:336732:1
position: 336732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336732-336829:1:exon

position:336829:1
position: 336829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339046-339168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340710-340867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340982-341086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342444-344259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345442-345576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349162-349342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352568-352818:1:exon

position:352818:1
position: 352818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:354184-354306:1:exon

position:354184:1
position: 354184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MEIOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MEIOC
product: meiosis specific with coiled-coil domain, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019623368.1
SIO_010081: MEIOC
subclass of: SO_0000673
so part of: MEIOC
location: join(336732..336829,340710..340867,340982..341086,342444..344259,345442..345576,349162..349342,352568..354169)
location: region:336732-354169:1
so has part: feature:336732-336829:1:exon
so has part: feature:340710-340867:1:exon
so has part: feature:340982-341086:1:exon
so has part: feature:342444-344259:1:exon
so has part: feature:345442-345576:1:exon
so has part: feature:349162-349342:1:exon
so has part: feature:352568-354169:1:exon

position:354169:1
position: 354169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336732-336829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340710-340867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340982-341086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:342444-344259:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345442-345576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:349162-349342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352568-354169:1:exon

MEIOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MEIOC
product: meiosis specific with coiled-coil domain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019623367.1
SIO_010081: MEIOC
subclass of: SO_0000673
so part of: MEIOC
location: join(336732..336829,339046..339168,340710..340867,340982..341086,342444..344259,345442..345576,349162..349342,352568..354168)
location: region:336732-354168:1
so has part: feature:336732-336829:1:exon
so has part: feature:339046-339168:1:exon
so has part: feature:340710-340867:1:exon
so has part: feature:340982-341086:1:exon
so has part: feature:342444-344259:1:exon
so has part: feature:345442-345576:1:exon
so has part: feature:349162-349342:1:exon
so has part: feature:352568-354168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336732-336829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339046-339168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340710-340867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340982-341086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342444-344259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345442-345576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349162-349342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352568-354168:1:exon

MEIOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MEIOC
product: meiosis specific with coiled-coil domain, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019623369.1
SIO_010081: MEIOC
subclass of: SO_0000673
so part of: MEIOC
location: join(336732..336829,339046..339168,340710..340867,340982..341086,342702..344259,345442..345576,349162..349342,352568..354168)
location: region:336732-354168:1
so has part: feature:336732-336829:1:exon
so has part: feature:339046-339168:1:exon
so has part: feature:340710-340867:1:exon
so has part: feature:340982-341086:1:exon
so has part: feature:342702-344259:1:exon
so has part: feature:345442-345576:1:exon
so has part: feature:349162-349342:1:exon
so has part: feature:352568-354168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336732-336829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339046-339168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340710-340867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340982-341086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342702-344259:1:exon

position:342702:1
position: 342702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:345442-345576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349162-349342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352568-354168:1:exon

MEIOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MEIOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis-specific coiled-coil domain-containing protein MEIOC isoform X1
translation: MEPKVVCRGGSCCWSSAEAGSRLADVFSSVMAESGSHGCYKPQNEENVDPPQTYSSSLSTPEYSAPVDSSLLYTPWSVCGDDSKQPAAPQLNVKSRIQTERNDYGSEADLYELVSNILEEQDKSQPYCAEGSCSSSLKSVWSMNATRITDHHYLLSETKRPVTAAVSQQSFYSSESTSAAEKQYLQSGNLAPQQKVEECYHGFPATDVEEQCLCPSRNDRANCCNMQANENIKTTPVCQNYPCVKNTFTPPAAYLEVIKDSGGDAYSYRRENACPKGADAQLQQKQAETFSQFHRCNENADYGRYAEYSHFTKAKPTKSINCSFQESKKIVSEMTEASSLDVEPYSKLFQFKSGTQRKIETIPDQQNFTFTKSAGLLSEKQFANEPPFCSDVGQKFEYGLNSLTACQGNSDCANGVDKPQFSKSDLQNPEYCKPLPLLPNSANLSAGANVRQAWMNFQTKPAVPPQSPSMVKLNNHLSTLQKNSSHPNDFLQLASSNVPLNGNLSHKNCQDNSLFFSSLDFGYNASERAQSAALMEALAKTGEENLIEFLSDKKLMQPDRGSSAQQFGTIENVNKHCFQLKPQSEHYELEGQKHSDRLLQNVYQDSVESQGQLNLRQGNGGNNAVNHTTHVQASSFASSCVMGDWKHNHQLGSAAIPSRSARPLGRLVVPLMESYNMFSSDSLNCFYPYVNDLMCDVPALGCQKQVKMNSGTARELRVKLEECYEQCRALEKERKETESALAKSYPGKSISSNNNAPVPRLTSNSSRVDRLIVDQLREQARVVTLLGKMERLRSSPLHVNISTALDKHLEVIRVVQTRRKYEIVNASHRPKQGAPRCQDDRDVLALAVAINEMSAATRHVRTSLWCALQVSLPKPAARQLLTAKALRERARPEEKRTKM
SIO_010081: MEIOC
subclass of: SO_0000673
so part of: MEIOC
location: join(336824..336829,339046..339168,340710..340867,340982..341086,342444..344259,345442..345576,349162..349342,352568..352743)
location: region:336824-352743:1
so has part: feature:336824-336829:1:exon
so has part: feature:339046-339168:1:exon
so has part: feature:340710-340867:1:exon
so has part: feature:340982-341086:1:exon
so has part: feature:342444-344259:1:exon
so has part: feature:345442-345576:1:exon
so has part: feature:349162-349342:1:exon
so has part: feature:352568-352743:1:exon

XP_019478912.1
type: Protein
SIO_000068: ncbiprotein

position:336824:1
position: 336824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352743:1
position: 352743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336824-336829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339046-339168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340710-340867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340982-341086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342444-344259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345442-345576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349162-349342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352568-352743:1:exon

MEIOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MEIOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis-specific coiled-coil domain-containing protein MEIOC isoform X3
translation: MEPKVVCRGGSCCWSSAEAGSRLADVFSSVMAESGSHGCYKPQNEENVDPPQTYSSSLSTPEYSAPVDSSLLYTPWSVCGDDSKQPAAPQLNVKSRIQTERNDYGSEADLYELVSNILEEQDKSQPYCAEGNDRANCCNMQANENIKTTPVCQNYPCVKNTFTPPAAYLEVIKDSGGDAYSYRRENACPKGADAQLQQKQAETFSQFHRCNENADYGRYAEYSHFTKAKPTKSINCSFQESKKIVSEMTEASSLDVEPYSKLFQFKSGTQRKIETIPDQQNFTFTKSAGLLSEKQFANEPPFCSDVGQKFEYGLNSLTACQGNSDCANGVDKPQFSKSDLQNPEYCKPLPLLPNSANLSAGANVRQAWMNFQTKPAVPPQSPSMVKLNNHLSTLQKNSSHPNDFLQLASSNVPLNGNLSHKNCQDNSLFFSSLDFGYNASERAQSAALMEALAKTGEENLIEFLSDKKLMQPDRGSSAQQFGTIENVNKHCFQLKPQSEHYELEGQKHSDRLLQNVYQDSVESQGQLNLRQGNGGNNAVNHTTHVQASSFASSCVMGDWKHNHQLGSAAIPSRSARPLGRLVVPLMESYNMFSSDSLNCFYPYVNDLMCDVPALGCQKQVKMNSGTARELRVKLEECYEQCRALEKERKETESALAKSYPGKSISSNNNAPVPRLTSNSSRVDRLIVDQLREQARVVTLLGKMERLRSSPLHVNISTALDKHLEVIRVVQTRRKYEIVNASHRPKQGAPRCQDDRDVLALAVAINEMSAATRHVRTSLWCALQVSLPKPAARQLLTAKALRERARPEEKRTKM
SIO_010081: MEIOC
subclass of: SO_0000673
so part of: MEIOC
location: join(336824..336829,339046..339168,340710..340867,340982..341086,342702..344259,345442..345576,349162..349342,352568..352743)
location: region:336824-352743:1
so has part: feature:336824-336829:1:exon
so has part: feature:339046-339168:1:exon
so has part: feature:340710-340867:1:exon
so has part: feature:340982-341086:1:exon
so has part: feature:342702-344259:1:exon
so has part: feature:345442-345576:1:exon
so has part: feature:349162-349342:1:exon
so has part: feature:352568-352743:1:exon

XP_019478914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336824-336829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339046-339168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340710-340867:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:340982-341086:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342702-344259:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345442-345576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:349162-349342:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:352568-352743:1:exon

MEIOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MEIOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis-specific coiled-coil domain-containing protein MEIOC isoform X2
translation: MENEENVDPPQTYSSSLSTPEYSAPVDSSLLYTPWSVCGDDSKQPAAPQLNVKSRIQTERNDYGSEADLYELVSNILEEQDKSQPYCAEGSCSSSLKSVWSMNATRITDHHYLLSETKRPVTAAVSQQSFYSSESTSAAEKQYLQSGNLAPQQKVEECYHGFPATDVEEQCLCPSRNDRANCCNMQANENIKTTPVCQNYPCVKNTFTPPAAYLEVIKDSGGDAYSYRRENACPKGADAQLQQKQAETFSQFHRCNENADYGRYAEYSHFTKAKPTKSINCSFQESKKIVSEMTEASSLDVEPYSKLFQFKSGTQRKIETIPDQQNFTFTKSAGLLSEKQFANEPPFCSDVGQKFEYGLNSLTACQGNSDCANGVDKPQFSKSDLQNPEYCKPLPLLPNSANLSAGANVRQAWMNFQTKPAVPPQSPSMVKLNNHLSTLQKNSSHPNDFLQLASSNVPLNGNLSHKNCQDNSLFFSSLDFGYNASERAQSAALMEALAKTGEENLIEFLSDKKLMQPDRGSSAQQFGTIENVNKHCFQLKPQSEHYELEGQKHSDRLLQNVYQDSVESQGQLNLRQGNGGNNAVNHTTHVQASSFASSCVMGDWKHNHQLGSAAIPSRSARPLGRLVVPLMESYNMFSSDSLNCFYPYVNDLMCDVPALGCQKQVKMNSGTARELRVKLEECYEQCRALEKERKETESALAKSYPGKSISSNNNAPVPRLTSNSSRVDRLIVDQLREQARVVTLLGKMERLRSSPLHVNISTALDKHLEVIRVVQTRRKYEIVNASHRPKQGAPRCQDDRDVLALAVAINEMSAATRHVRTSLWCALQVSLPKPAARQLLTAKALRERARPEEKRTKM
SIO_010081: MEIOC
subclass of: SO_0000673
so part of: MEIOC
location: join(336824..336829,340710..340867,340982..341086,342444..344259,345442..345576,349162..349342,352568..352743)
location: region:336824-352743:1
so has part: feature:336824-336829:1:exon
so has part: feature:340710-340867:1:exon
so has part: feature:340982-341086:1:exon
so has part: feature:342444-344259:1:exon
so has part: feature:345442-345576:1:exon
so has part: feature:349162-349342:1:exon
so has part: feature:352568-352743:1:exon

XP_019478913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:336824-336829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340710-340867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340982-341086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:342444-344259:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345442-345576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:349162-349342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352568-352743:1:exon

MEIOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MEIOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meiosis-specific coiled-coil domain-containing protein MEIOC isoform X4
translation: MAESGSHGCYKPQNEENVDPPQTYSSSLSTPEYSAPVDSSLLYTPWSVCGDDSKQPAAPQLNVKSRIQTERNDYGSEADLYELVSNILEEQDKSQPYCAEGSCSSSLKSVWSMNATRITDHHYLLSETKRPVTAAVSQQSFYSSESTSAAEKQYLQSGNLAPQQKVEECYHGFPATDVEEQCLCPSRNDRANCCNMQANENIKTTPVCQNYPCVKNTFTPPAAYLEVIKDSGGDAYSYRRENACPKGADAQLQQKQAETFSQFHRCNENADYGRYAEYSHFTKAKPTKSINCSFQESKKIVSEMTEASSLDVEPYSKLFQFKSGTQRKIETIPDQQNFTFTKSAGLLSEKQFANEPPFCSDVGQKFEYGLNSLTACQGNSDCANGVDKPQFSKSDLQNPEYCKPLPLLPNSANLSAGANVRQAWMNFQTKPAVPPQSPSMVKLNNHLSTLQKNSSHPNDFLQLASSNVPLNGNLSHKNCQDNSLFFSSLDFGYNASERAQSAALMEALAKTGEENLIEFLSDKKLMQPDRGSSAQQFGTIENVNKHCFQLKPQSEHYELEGQKHSDRLLQNVYQDSVESQGQLNLRQGNGGNNAVNHTTHVQASSFASSCVMGDWKHNHQLGSAAIPSRSARPLGRLVVPLMESYNMFSSDSLNCFYPYVNDLMCDVPALGCQKQVKMNSGTARELRVKLEECYEQCRALEKERKETESALAKSYPGKSISSNNNAPVPRLTSNSSRVDRLIVDQLREQARVVTLLGKMERLRSSPLHVNISTALDKHLEVIRVVQTRRKYEIVNASHRPKQGAPRCQDDRDVLALAVAINEMSAATRHVRTSLWCALQVSLPKPAARQLLTAKALRERARPEEKRTKM
SIO_010081: MEIOC
subclass of: SO_0000673
so part of: MEIOC
location: join(339130..339168,340710..340867,340982..341086,342444..344259,345442..345576,349162..349342,352568..352743)
location: region:339130-352743:1
so has part: feature:339130-339168:1:exon
so has part: feature:340710-340867:1:exon
so has part: feature:340982-341086:1:exon
so has part: feature:342444-344259:1:exon
so has part: feature:345442-345576:1:exon
so has part: feature:349162-349342:1:exon
so has part: feature:352568-352743:1:exon

XP_031412903.1
type: Protein
SIO_000068: ncbiprotein

position:339130:1
position: 339130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:339130-339168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:340710-340867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:340982-341086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:342444-344259:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:345442-345576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:349162-349342:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:352568-352743:1:exon

CCDC43
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CCDC43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354937..>362618)
location: region:354937-362618:-1
so has part: feature:354937-362618:-1:exon
subclass of: SO_0000010

100550365
type: Gene
SIO_000068: ncbigene

position:354937:-1
position: 354937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362618:-1
position: 362618
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354937-362618:-1:exon

CCDC43
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC43
product: coiled-coil domain containing 43
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_010724464.3
SIO_010081: CCDC43
subclass of: SO_0000673
so part of: CCDC43
location: complement(join(354937..356371,357044..357102,357421..357556,358675..358762,362487..>362618))
location: region:354937-362618:-1
so has part: feature:362487-362618:-1:exon
so has part: feature:358675-358762:-1:exon
so has part: feature:357421-357556:-1:exon
so has part: feature:357044-357102:-1:exon
so has part: feature:354937-356371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362487-362618:-1:exon

position:362487:-1
position: 362487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358675-358762:-1:exon

position:358675:-1
position: 358675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358762:-1
position: 358762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:357421-357556:-1:exon

position:357421:-1
position: 357421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357556:-1
position: 357556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:357044-357102:-1:exon

position:357044:-1
position: 357044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357102:-1
position: 357102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:354937-356371:-1:exon

position:356371:-1
position: 356371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC43
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC43
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 43
translation: LAARLEALGLDRAVYGAYIAGLLREEESEEERLEALRGVLAACLEEDLLNDVCREVVEKWSESQIVDAKEKKEDEVQAIASMMEKQARIIVKPKEISQEEKQRKAALLAQYANVTDEEDGDDEQDSSTATAVNIGSEKSLFRNTNVEDVLNARKLERELLRDEFQKKKEQDKLQREKDKLAKQERKEKEKKRTQKGERKR
SIO_010081: CCDC43
subclass of: SO_0000673
so part of: CCDC43
location: complement(join(356184..356371,357044..357102,357421..357556,358675..358762,362487..>362618))
location: region:356184-362618:-1
so has part: feature:362487-362618:-1:exon
so has part: feature:358675-358762:-1:exon
so has part: feature:357421-357556:-1:exon
so has part: feature:357044-357102:-1:exon
so has part: feature:356184-356371:-1:exon

XP_010722766.1
type: Protein
SIO_000068: ncbiprotein

position:356184:-1
position: 356184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362487-362618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358675-358762:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357421-357556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357044-357102:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:356184-356371:-1:exon

DBF4B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 362908..372749
location: region:362908-372749:1
so has part: feature:362908-372749:1:exon
subclass of: SO_0000010

104914554
type: Gene
SIO_000068: ncbigene

position:362908:1
position: 362908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372749:1
position: 372749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362908-372749:1:exon

DBF4B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DBF4B
product: DBF4 zinc finger B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_010724436.3
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(362908..363114,365701..365892,366636..366686,367234..367303,368029..368093,368412..368448,369699..369741,370283..370399,370595..370703,371378..371487,371649..372749)
location: region:362908-372749:1
so has part: feature:362908-363114:1:exon
so has part: feature:365701-365892:1:exon
so has part: feature:366636-366686:1:exon
so has part: feature:367234-367303:1:exon
so has part: feature:368029-368093:1:exon
so has part: feature:368412-368448:1:exon
so has part: feature:369699-369741:1:exon
so has part: feature:370283-370399:1:exon
so has part: feature:370595-370703:1:exon
so has part: feature:371378-371487:1:exon
so has part: feature:371649-372749:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:362908-363114:1:exon

position:363114:1
position: 363114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:365701-365892:1:exon

position:365701:1
position: 365701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365892:1
position: 365892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:366636-366686:1:exon

position:366636:1
position: 366636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366686:1
position: 366686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:367234-367303:1:exon

position:367234:1
position: 367234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367303:1
position: 367303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:368029-368093:1:exon

position:368029:1
position: 368029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368093:1
position: 368093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:368412-368448:1:exon

position:368412:1
position: 368412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368448:1
position: 368448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:369699-369741:1:exon

position:369699:1
position: 369699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369741:1
position: 369741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:370283-370399:1:exon

position:370283:1
position: 370283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370399:1
position: 370399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:370595-370703:1:exon

position:370595:1
position: 370595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370703:1
position: 370703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:371378-371487:1:exon

position:371378:1
position: 371378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371487:1
position: 371487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:371649-372749:1:exon

position:371649:1
position: 371649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DBF4B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DBF4B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein DBF4 homolog B
translation: MWQLGTVVRKGERKSCGTTDWWVSPLPGKPWSRSYMKAHRGACGVTESFLSKEVSCVVSSKKEAKRSRARAQAAKRSSVTSEDTKAQSSTPSSSKENHARPQQKPPDTALISRGRELLQKAMKNQDTCSGSSILANARLWGVQIVHVDEMLSYAQQLLRAASGARKQRTEARCPVSGQRAHTGKLKPPFLKVEDQSRQFRPFHHQFKSFPGLNLLAPKGFSPFEPPENLSNSFRARAVEGCKEEKSPQSTAVPKKKRGFCECCQETFEELQKHLQSPQHRCFALDDSHYALVDHVIAQLTNSITGQLPRVPLPCLTDEHLMPRAQCAAGAEVLTAVLGEERQQCEQGAVGLLSADPGPDTKGCSSRLPRNGVGNPTEAEGLSGSCPSGLSAEFRSATAAPSEPHRLLHAPPACRKRPLCPAQPTPLGKKPRVELRTDPTRCPVFLQTPQHNSTTAPRGFGMSSELDWDVPLLSTLPQDSRICSVDRDLLQRTHTSVRDSGYDSQLCLVLRRNSESDRSCRNCCAGSRAAFPPISDLFWQLD
SIO_010081: DBF4B
subclass of: SO_0000673
so part of: DBF4B
location: join(362983..363114,365701..365892,366636..366686,367234..367303,368029..368093,368412..368448,369699..369741,370283..370399,370595..370703,371378..371487,371649..372348)
location: region:362983-372348:1
so has part: feature:362983-363114:1:exon
so has part: feature:365701-365892:1:exon
so has part: feature:366636-366686:1:exon
so has part: feature:367234-367303:1:exon
so has part: feature:368029-368093:1:exon
so has part: feature:368412-368448:1:exon
so has part: feature:369699-369741:1:exon
so has part: feature:370283-370399:1:exon
so has part: feature:370595-370703:1:exon
so has part: feature:371378-371487:1:exon
so has part: feature:371649-372348:1:exon

XP_010722738.1
type: Protein
SIO_000068: ncbiprotein

position:362983:1
position: 362983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372348:1
position: 372348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362983-363114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:365701-365892:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:366636-366686:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:367234-367303:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:368029-368093:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:368412-368448:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:369699-369741:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:370283-370399:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:370595-370703:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:371378-371487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:371649-372348:1:exon

ADAM11
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ADAM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <374300..383871
location: region:374300-383871:1
so has part: feature:374300-383871:1:exon
subclass of: SO_0000010

104914559
type: Gene
SIO_000068: ncbigene

position:374300:1
position: 374300
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:383871:1
position: 383871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374300-383871:1:exon

ADAM11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ADAM11
product: ADAM metallopeptidase domain 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_019623327.1
SIO_010081: ADAM11
subclass of: SO_0000673
so part of: ADAM11
location: join(<374300..374539,374741..374817,375023..375086,375679..375764,375848..375914,376013..376061,376140..376210,376543..376617,376678..376749,377215..377372,377442..377526,377628..377718,377796..377847,378328..378427,378917..378988,379060..379152,379225..379305,379576..379626,380344..380407,380474..380573,380650..380769,381538..381706,381785..381899,381989..382079,382539..383871)
location: region:374300-383871:1
so has part: feature:374300-374539:1:exon
so has part: feature:374741-374817:1:exon
so has part: feature:375023-375086:1:exon
so has part: feature:375679-375764:1:exon
so has part: feature:375848-375914:1:exon
so has part: feature:376013-376061:1:exon
so has part: feature:376140-376210:1:exon
so has part: feature:376543-376617:1:exon
so has part: feature:376678-376749:1:exon
so has part: feature:377215-377372:1:exon
so has part: feature:377442-377526:1:exon
so has part: feature:377628-377718:1:exon
so has part: feature:377796-377847:1:exon
so has part: feature:378328-378427:1:exon
so has part: feature:378917-378988:1:exon
so has part: feature:379060-379152:1:exon
so has part: feature:379225-379305:1:exon
so has part: feature:379576-379626:1:exon
so has part: feature:380344-380407:1:exon
so has part: feature:380474-380573:1:exon
so has part: feature:380650-380769:1:exon
so has part: feature:381538-381706:1:exon
so has part: feature:381785-381899:1:exon
so has part: feature:381989-382079:1:exon
so has part: feature:382539-383871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374300-374539:1:exon

position:374539:1
position: 374539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:374741-374817:1:exon

position:374741:1
position: 374741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374817:1
position: 374817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:375023-375086:1:exon

position:375023:1
position: 375023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375086:1
position: 375086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:375679-375764:1:exon

position:375679:1
position: 375679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375764:1
position: 375764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:375848-375914:1:exon

position:375848:1
position: 375848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375914:1
position: 375914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:376013-376061:1:exon

position:376013:1
position: 376013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376061:1
position: 376061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:376140-376210:1:exon

position:376140:1
position: 376140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376210:1
position: 376210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:376543-376617:1:exon

position:376543:1
position: 376543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376617:1
position: 376617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:376678-376749:1:exon

position:376678:1
position: 376678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376749:1
position: 376749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:377215-377372:1:exon

position:377215:1
position: 377215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377372:1
position: 377372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:377442-377526:1:exon

position:377442:1
position: 377442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377526:1
position: 377526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:377628-377718:1:exon

position:377628:1
position: 377628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377718:1
position: 377718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:377796-377847:1:exon

position:377796:1
position: 377796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377847:1
position: 377847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:378328-378427:1:exon

position:378328:1
position: 378328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378427:1
position: 378427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:378917-378988:1:exon

position:378917:1
position: 378917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378988:1
position: 378988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:379060-379152:1:exon

position:379060:1
position: 379060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379152:1
position: 379152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:379225-379305:1:exon

position:379225:1
position: 379225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379305:1
position: 379305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:379576-379626:1:exon

position:379576:1
position: 379576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379626:1
position: 379626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:380344-380407:1:exon

position:380344:1
position: 380344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380407:1
position: 380407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:380474-380573:1:exon

position:380474:1
position: 380474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380573:1
position: 380573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:380650-380769:1:exon

position:380650:1
position: 380650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380769:1
position: 380769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:381538-381706:1:exon

position:381538:1
position: 381538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381706:1
position: 381706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:381785-381899:1:exon

position:381785:1
position: 381785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381899:1
position: 381899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:381989-382079:1:exon

position:381989:1
position: 381989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382079:1
position: 382079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:382539-383871:1:exon

position:382539:1
position: 382539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ADAM11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ADAM11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disintegrin and metalloproteinase domain-containing protein 11
translation: GTHPTGPTTNHHSRPAGPAGATPQTSTPQQRLPQTGWLEGQALAEVTHPSRLVGHSAGGEVLKHQLDTRVRNESGAGGGPGVHLAQVSFMVRAFGSAFILDLELNHHLLASHYVERHLGVGQNSSSTGTGEHCYYQGRVRGWPRSFAALSSCQGLHGVFSDGRDVFLIEPQAGTEHAEGLQPHLIQRTPSCALPGCMLGAVGQTGSGSSARLRRQRRQVRRAQHTVHSETKYIELAVVNDHQLFLQLRRSVVLTSNFAKSVVNLADMIYKEQLNTRIVLVAMETWAAGDRIRMEEDSMGTLNEFMRHRREEHSDAIHLFSGRTFQSSRSGTAFVGGICSAGRAGGVNEYGNMAAMAVTLAQTLGQNVGMMWNKHRASAGDCRCPDAWLGCIMEDTGYYLPRKFSRCSIDEYNQFLQDGGGSCLFNKPLKLLDPPECGNGFVEAGEECDCGSQTECARSGGNCCKKCTLTHDAMCSDGLCCKGCKYEPRGVSCREAVNECDIPETCTGDSSQCPPNLHKLDGYFCDNEQGRCYGGRCKTRDRQCNALWGRGSAERFCYEKLNVEGTERGNCGREGAGWTQCNKQDVLCGFLLCANISGTPRLGELSGEVATTTFFHQNRYVDCRGGHVQLADGSELSYVEDGTPCGPAMLCLDHKCLPVTAFNFSSCPGSGDGKICFEHGVCSNEGKCICQPEWTGKDCSVYDPIPEPKPTGETERYKGPSGTNIIIGSIAGAVLVAAIVLGGTGWGFKNIRRGRYDPAQQGV
SIO_010081: ADAM11
subclass of: SO_0000673
so part of: ADAM11
location: join(<374300..374539,374741..374817,375023..375086,375679..375764,375848..375914,376013..376061,376140..376210,376543..376617,376678..376749,377215..377372,377442..377526,377628..377718,377796..377847,378328..378427,378917..378988,379060..379152,379225..379305,379576..379626,380344..380407,380474..380573,380650..380769,381538..381706,381785..381899,381989..382079,382539..382584)
location: region:374300-382584:1
so has part: feature:374300-374539:1:exon
so has part: feature:374741-374817:1:exon
so has part: feature:375023-375086:1:exon
so has part: feature:375679-375764:1:exon
so has part: feature:375848-375914:1:exon
so has part: feature:376013-376061:1:exon
so has part: feature:376140-376210:1:exon
so has part: feature:376543-376617:1:exon
so has part: feature:376678-376749:1:exon
so has part: feature:377215-377372:1:exon
so has part: feature:377442-377526:1:exon
so has part: feature:377628-377718:1:exon
so has part: feature:377796-377847:1:exon
so has part: feature:378328-378427:1:exon
so has part: feature:378917-378988:1:exon
so has part: feature:379060-379152:1:exon
so has part: feature:379225-379305:1:exon
so has part: feature:379576-379626:1:exon
so has part: feature:380344-380407:1:exon
so has part: feature:380474-380573:1:exon
so has part: feature:380650-380769:1:exon
so has part: feature:381538-381706:1:exon
so has part: feature:381785-381899:1:exon
so has part: feature:381989-382079:1:exon
so has part: feature:382539-382584:1:exon

XP_019478872.1
type: Protein
SIO_000068: ncbiprotein

position:382584:1
position: 382584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374300-374539:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:374741-374817:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:375023-375086:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:375679-375764:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:375848-375914:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:376013-376061:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:376140-376210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:376543-376617:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:376678-376749:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:377215-377372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:377442-377526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:377628-377718:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:377796-377847:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:378328-378427:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:378917-378988:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:379060-379152:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:379225-379305:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:379576-379626:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:380344-380407:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:380474-380573:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:380650-380769:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:381538-381706:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:381785-381899:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:381989-382079:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:382539-382584:1:exon

GJC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(389546..403283)
location: region:389546-403283:-1
so has part: feature:389546-403283:-1:exon
subclass of: SO_0000010

100550518
type: Gene
SIO_000068: ncbigene

position:389546:-1
position: 389546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:403283:-1
position: 403283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389546-403283:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XM_019623376.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392646,392773..392847,393552..393859,394089..394201,394364..394510,402990..403283))
location: region:389546-403283:-1
so has part: feature:402990-403283:-1:exon
so has part: feature:394364-394510:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:393552-393859:-1:exon
so has part: feature:392773-392847:-1:exon
so has part: feature:389546-392646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402990-403283:-1:exon

position:402990:-1
position: 402990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394364-394510:-1:exon

position:394364:-1
position: 394364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394510:-1
position: 394510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394089-394201:-1:exon

position:394089:-1
position: 394089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:394201:-1
position: 394201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:393552-393859:-1:exon

position:393552:-1
position: 393552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:393859:-1
position: 393859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:392773-392847:-1:exon

position:392773:-1
position: 392773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392847:-1
position: 392847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:389546-392646:-1:exon

position:392646:-1
position: 392646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_031557044.1
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392646,392773..392847,393552..393859,394089..394201,394364..394680,402990..403283))
location: region:389546-403283:-1
so has part: feature:402990-403283:-1:exon
so has part: feature:394364-394680:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:393552-393859:-1:exon
so has part: feature:392773-392847:-1:exon
so has part: feature:389546-392646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402990-403283:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394364-394680:-1:exon

position:394680:-1
position: 394680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394089-394201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393552-393859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392773-392847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389546-392646:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_019623375.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392646,392773..392847,393552..393859,394089..394201,394364..394510,402688..402796))
location: region:389546-402796:-1
so has part: feature:402688-402796:-1:exon
so has part: feature:394364-394510:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:393552-393859:-1:exon
so has part: feature:392773-392847:-1:exon
so has part: feature:389546-392646:-1:exon

position:402796:-1
position: 402796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:402688-402796:-1:exon

position:402688:-1
position: 402688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394364-394510:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394089-394201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393552-393859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392773-392847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389546-392646:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019623373.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392646,392773..392847,393552..393859,394089..394201,394364..394680,402688..402796))
location: region:389546-402796:-1
so has part: feature:402688-402796:-1:exon
so has part: feature:394364-394680:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:393552-393859:-1:exon
so has part: feature:392773-392847:-1:exon
so has part: feature:389546-392646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402688-402796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394364-394680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394089-394201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393552-393859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392773-392847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389546-392646:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_019623371.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392646,392773..392847,393552..393859,394089..394201,394364..394918,402688..402796))
location: region:389546-402796:-1
so has part: feature:402688-402796:-1:exon
so has part: feature:394364-394918:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:393552-393859:-1:exon
so has part: feature:392773-392847:-1:exon
so has part: feature:389546-392646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:402688-402796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394364-394918:-1:exon

position:394918:-1
position: 394918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394089-394201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393552-393859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392773-392847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389546-392646:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_010724447.3
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392646,394089..394201,394364..397794))
location: region:389546-397794:-1
so has part: feature:394364-397794:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:389546-392646:-1:exon

position:397794:-1
position: 397794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394364-397794:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394089-394201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:389546-392646:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_019623374.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392646,392773..392847,393552..393859,394089..394201,394364..394510,394599..397793))
location: region:389546-397793:-1
so has part: feature:394599-397793:-1:exon
so has part: feature:394364-394510:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:393552-393859:-1:exon
so has part: feature:392773-392847:-1:exon
so has part: feature:389546-392646:-1:exon

position:397793:-1
position: 397793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394599-397793:-1:exon

position:394599:-1
position: 394599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394364-394510:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394089-394201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393552-393859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392773-392847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389546-392646:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_019623372.2
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392646,392773..392847,393552..393859,394089..394201,394364..394510,394590..397793))
location: region:389546-397793:-1
so has part: feature:394590-397793:-1:exon
so has part: feature:394364-394510:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:393552-393859:-1:exon
so has part: feature:392773-392847:-1:exon
so has part: feature:389546-392646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394590-397793:-1:exon

position:394590:-1
position: 394590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:394364-394510:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394089-394201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:393552-393859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392773-392847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389546-392646:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 194 samples with support for all annotated introns
transcript id: XM_003213003.4
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392646,392773..392847,394089..394201,394364..397793))
location: region:389546-397793:-1
so has part: feature:394364-397793:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:392773-392847:-1:exon
so has part: feature:389546-392646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394364-397793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394089-394201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:392773-392847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:389546-392646:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_010724446.3
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392646,392773..392847,393552..393635,394089..394201,394364..397793))
location: region:389546-397793:-1
so has part: feature:394364-397793:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:393552-393635:-1:exon
so has part: feature:392773-392847:-1:exon
so has part: feature:389546-392646:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394364-397793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394089-394201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:393552-393635:-1:exon

position:393635:-1
position: 393635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:392773-392847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:389546-392646:-1:exon

GJC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_010724448.3
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(389546..392387,392483..392576))
location: region:389546-392576:-1
so has part: feature:392483-392576:-1:exon
so has part: feature:389546-392387:-1:exon

position:392576:-1
position: 392576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392483-392576:-1:exon

position:392483:-1
position: 392483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:389546-392387:-1:exon

position:392387:-1
position: 392387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X1
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(391443..392627)
location: region:391443-392627:-1
so has part: feature:391443-392627:-1:exon

XP_019478916.1
type: Protein
SIO_000068: ncbiprotein

position:391443:-1
position: 391443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392627:-1
position: 392627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:391443-392627:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X1
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(391443..392627)
location: region:391443-392627:-1
so has part: feature:391443-392627:-1:exon

XP_019478917.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391443-392627:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X1
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(391443..392627)
location: region:391443-392627:-1
so has part: feature:391443-392627:-1:exon

XP_019478918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391443-392627:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X1
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(391443..392627)
location: region:391443-392627:-1
so has part: feature:391443-392627:-1:exon

XP_019478919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391443-392627:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X1
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(391443..392627)
location: region:391443-392627:-1
so has part: feature:391443-392627:-1:exon

XP_019478920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391443-392627:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X1
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(391443..392627)
location: region:391443-392627:-1
so has part: feature:391443-392627:-1:exon

XP_019478921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391443-392627:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X1
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(391443..392627)
location: region:391443-392627:-1
so has part: feature:391443-392627:-1:exon

XP_031412904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391443-392627:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X1
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(391443..392627)
location: region:391443-392627:-1
so has part: feature:391443-392627:-1:exon

XP_003213051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391443-392627:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X1
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(391443..392627)
location: region:391443-392627:-1
so has part: feature:391443-392627:-1:exon

XP_010722748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391443-392627:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X1
translation: MSWSFLTRLLEEIHNHSTFVGKIWLSVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(391443..392627)
location: region:391443-392627:-1
so has part: feature:391443-392627:-1:exon

XP_010722749.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:391443-392627:-1:exon

GJC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction gamma-1 protein isoform X2
translation: MSKIILVATPSVMYLGYAIHKIARMVEHSDVDRRFRSKSFSTRWKQHRGLEEAEDDHEEDPMMYPEIELESERENKEQQPPAKAKHDGRRRIREDGLMRIYVLQLLVRATFEVGFLIGQYLLYGFEVSPVFVCSRKPCPHKIDCFISRPTEKTIFLLIMYGVSCMCLLLNVWEMLHLGFGTIRDTLNSKRKELEDSGTYNYPFTWNTPSAPPGYNIAVKPDQMQYTELSNAKMAYKQNKANIAQEQQYGSNEENIPADLENLQREIKVAQERLDMAIQAYNNQNNPSSSSREKKSKAGSNKSSASSKSGDGKNSVWI
SIO_010081: GJC1
subclass of: SO_0000673
so part of: GJC1
location: complement(join(391443..392387,392483..392491))
location: region:391443-392491:-1
so has part: feature:392483-392491:-1:exon
so has part: feature:391443-392387:-1:exon

XP_010722750.1
type: Protein
SIO_000068: ncbiprotein

position:392491:-1
position: 392491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:392483-392491:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:391443-392387:-1:exon

GJC1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: GJC1
product: gap junction protein gamma 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 201 samples with support for all annotated introns
transcript id: XR_004162081.1
SIO_010081: GJC1
so part of: GJC1
location: complement(join(393547..393859,394089..394201,394364..397784))
location: region:393547-397784:-1
so has part: feature:394364-397784:-1:exon
so has part: feature:394089-394201:-1:exon
so has part: feature:393547-393859:-1:exon

position:393547:-1
position: 393547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397784:-1
position: 397784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394364-397784:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:394089-394201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:393547-393859:-1:exon

EFTUD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: EFTUD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(406375..421304)
location: region:406375-421304:-1
so has part: feature:406375-421304:-1:exon
subclass of: SO_0000010

100549751
type: Gene
SIO_000068: ncbigene

position:406375:-1
position: 406375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421304:-1
position: 421304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406375-421304:-1:exon

EFTUD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EFTUD2
product: elongation factor Tu GTP binding domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_003212998.4
SIO_010081: EFTUD2
subclass of: SO_0000673
so part of: EFTUD2
location: complement(join(406375..406950,407050..407157,407729..407882,408143..408237,408718..408836,409035..409122,409538..409664,409935..410021,410794..410876,411107..411208,411421..411561,411719..411830,412190..412383,412889..413016,413286..413421,413808..413898,414267..414330,415942..416066,416639..416805,417254..417336,417627..417717,418618..418653,418857..418922,419191..419266,420463..420541,420709..420874,421117..421304))
location: region:406375-421304:-1
so has part: feature:421117-421304:-1:exon
so has part: feature:420709-420874:-1:exon
so has part: feature:420463-420541:-1:exon
so has part: feature:419191-419266:-1:exon
so has part: feature:418857-418922:-1:exon
so has part: feature:418618-418653:-1:exon
so has part: feature:417627-417717:-1:exon
so has part: feature:417254-417336:-1:exon
so has part: feature:416639-416805:-1:exon
so has part: feature:415942-416066:-1:exon
so has part: feature:414267-414330:-1:exon
so has part: feature:413808-413898:-1:exon
so has part: feature:413286-413421:-1:exon
so has part: feature:412889-413016:-1:exon
so has part: feature:412190-412383:-1:exon
so has part: feature:411719-411830:-1:exon
so has part: feature:411421-411561:-1:exon
so has part: feature:411107-411208:-1:exon
so has part: feature:410794-410876:-1:exon
so has part: feature:409935-410021:-1:exon
so has part: feature:409538-409664:-1:exon
so has part: feature:409035-409122:-1:exon
so has part: feature:408718-408836:-1:exon
so has part: feature:408143-408237:-1:exon
so has part: feature:407729-407882:-1:exon
so has part: feature:407050-407157:-1:exon
so has part: feature:406375-406950:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421117-421304:-1:exon

position:421117:-1
position: 421117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:420709-420874:-1:exon

position:420709:-1
position: 420709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420874:-1
position: 420874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:420463-420541:-1:exon

position:420463:-1
position: 420463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420541:-1
position: 420541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:419191-419266:-1:exon

position:419191:-1
position: 419191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:419266:-1
position: 419266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:418857-418922:-1:exon

position:418857:-1
position: 418857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418922:-1
position: 418922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:418618-418653:-1:exon

position:418618:-1
position: 418618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418653:-1
position: 418653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:417627-417717:-1:exon

position:417627:-1
position: 417627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417717:-1
position: 417717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:417254-417336:-1:exon

position:417254:-1
position: 417254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417336:-1
position: 417336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:416639-416805:-1:exon

position:416639:-1
position: 416639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416805:-1
position: 416805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:415942-416066:-1:exon

position:415942:-1
position: 415942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416066:-1
position: 416066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:414267-414330:-1:exon

position:414267:-1
position: 414267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414330:-1
position: 414330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:413808-413898:-1:exon

position:413808:-1
position: 413808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413898:-1
position: 413898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:413286-413421:-1:exon

position:413286:-1
position: 413286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413421:-1
position: 413421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:412889-413016:-1:exon

position:412889:-1
position: 412889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413016:-1
position: 413016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:412190-412383:-1:exon

position:412190:-1
position: 412190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412383:-1
position: 412383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:411719-411830:-1:exon

position:411719:-1
position: 411719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411830:-1
position: 411830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:411421-411561:-1:exon

position:411421:-1
position: 411421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411561:-1
position: 411561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:411107-411208:-1:exon

position:411107:-1
position: 411107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411208:-1
position: 411208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:410794-410876:-1:exon

position:410794:-1
position: 410794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410876:-1
position: 410876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:409935-410021:-1:exon

position:409935:-1
position: 409935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410021:-1
position: 410021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:409538-409664:-1:exon

position:409538:-1
position: 409538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409664:-1
position: 409664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:409035-409122:-1:exon

position:409035:-1
position: 409035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409122:-1
position: 409122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:408718-408836:-1:exon

position:408718:-1
position: 408718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408836:-1
position: 408836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:408143-408237:-1:exon

position:408143:-1
position: 408143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408237:-1
position: 408237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:407729-407882:-1:exon

position:407729:-1
position: 407729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407882:-1
position: 407882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:407050-407157:-1:exon

position:407050:-1
position: 407050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407157:-1
position: 407157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:406375-406950:-1:exon

position:406950:-1
position: 406950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFTUD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EFTUD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 116 kDa U5 small nuclear ribonucleoprotein component
translation: MDTDLYDEFGNYIGPELDSDDEDDELGRESKDLDELEDDDDDDDMGDHDEDHPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLADLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGIKSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTERLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVLSPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCKKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEVNRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELAKQDVVLNYPM
SIO_010081: EFTUD2
subclass of: SO_0000673
so part of: EFTUD2
location: complement(join(406855..406950,407050..407157,407729..407882,408143..408237,408718..408836,409035..409122,409538..409664,409935..410021,410794..410876,411107..411208,411421..411561,411719..411830,412190..412383,412889..413016,413286..413421,413808..413898,414267..414330,415942..416066,416639..416805,417254..417336,417627..417717,418618..418653,418857..418922,419191..419266,420463..420541,420709..420874,421117..421221))
location: region:406855-421221:-1
so has part: feature:421117-421221:-1:exon
so has part: feature:420709-420874:-1:exon
so has part: feature:420463-420541:-1:exon
so has part: feature:419191-419266:-1:exon
so has part: feature:418857-418922:-1:exon
so has part: feature:418618-418653:-1:exon
so has part: feature:417627-417717:-1:exon
so has part: feature:417254-417336:-1:exon
so has part: feature:416639-416805:-1:exon
so has part: feature:415942-416066:-1:exon
so has part: feature:414267-414330:-1:exon
so has part: feature:413808-413898:-1:exon
so has part: feature:413286-413421:-1:exon
so has part: feature:412889-413016:-1:exon
so has part: feature:412190-412383:-1:exon
so has part: feature:411719-411830:-1:exon
so has part: feature:411421-411561:-1:exon
so has part: feature:411107-411208:-1:exon
so has part: feature:410794-410876:-1:exon
so has part: feature:409935-410021:-1:exon
so has part: feature:409538-409664:-1:exon
so has part: feature:409035-409122:-1:exon
so has part: feature:408718-408836:-1:exon
so has part: feature:408143-408237:-1:exon
so has part: feature:407729-407882:-1:exon
so has part: feature:407050-407157:-1:exon
so has part: feature:406855-406950:-1:exon

XP_003213046.2
type: Protein
SIO_000068: ncbiprotein

position:406855:-1
position: 406855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421221:-1
position: 421221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421117-421221:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:420709-420874:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:420463-420541:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:419191-419266:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:418857-418922:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418618-418653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:417627-417717:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417254-417336:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416639-416805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:415942-416066:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414267-414330:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:413808-413898:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:413286-413421:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:412889-413016:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:412190-412383:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:411719-411830:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:411421-411561:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:411107-411208:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:410794-410876:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:409935-410021:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:409538-409664:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:409035-409122:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:408718-408836:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:408143-408237:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:407729-407882:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:407050-407157:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:406855-406950:-1:exon

CCDC103
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CCDC103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 422244..425416
location: region:422244-425416:1
so has part: feature:422244-425416:1:exon
subclass of: SO_0000010

100550824
type: Gene
SIO_000068: ncbigene

position:422244:1
position: 422244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425416:1
position: 425416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422244-425416:1:exon

CCDC103
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC103
product: coiled-coil domain containing 103
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 151 samples with support for all annotated introns
transcript id: XM_031557045.1
SIO_010081: CCDC103
subclass of: SO_0000673
so part of: CCDC103
location: join(422244..423186,424917..425416)
location: region:422244-425416:1
so has part: feature:422244-423186:1:exon
so has part: feature:424917-425416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:422244-423186:1:exon

position:423186:1
position: 423186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424917-425416:1:exon

position:424917:1
position: 424917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 103
translation: MYFTLCPLPIPCRDIVLASHLRPLEKKDKMGNKRNVLWNPCAGHTRGQQVTEVEIPQELEQLPGTSAEFYRDWRRCLKSGKEKYQLLLKLEGKALSRIFQAELGFGLLGEFLTVLAENVCHEDRDAVLQILQSLSGTKRFGLNLDLLSTSEKESTRDLFRKLQSMSGGYWTPGHPCGKAEGEAHPTDTVLQKEAEERRVIELMRCYQAS
SIO_010081: CCDC103
subclass of: SO_0000673
so part of: CCDC103
location: join(423016..423186,424917..425375)
location: region:423016-425375:1
so has part: feature:423016-423186:1:exon
so has part: feature:424917-425375:1:exon

XP_031412905.1
type: Protein
SIO_000068: ncbiprotein

position:423016:1
position: 423016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425375:1
position: 425375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:423016-423186:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424917-425375:1:exon

FAM187A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FAM187A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 425508..428639
location: region:425508-428639:1
so has part: feature:425508-428639:1:exon
subclass of: SO_0000010

104914557
type: Gene
SIO_000068: ncbigene

position:425508:1
position: 425508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428639:1
position: 428639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425508-428639:1:exon

FAM187A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FAM187A
product: family with sequence similarity 187 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724452.2
SIO_010081: FAM187A
subclass of: SO_0000673
so part of: FAM187A
location: 425508..428639
location: region:425508-428639:1
so has part: feature:425508-428639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425508-428639:1:exon

FAM187A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FAM187A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Ig-like V-type domain-containing protein FAM187A
translation: MEMGLLGAVLLLCMADVLHSFAIEEKEDIFRRMVCPAFLMFDNAAYLADMTFELPCNCKPEQVSNVVWYFQKNMGGHETTVLTDFSGNMVLDSSHIHVGTDVLKRFTIRMFSLIVFRAQVSDSGHYLCGTKKGDFFYGYDVDVQPTKHITVAFLDTGQHVQDDYTAKAFSLFTTFWDWTTCDRCGVRGEQRRIGLCYVHSARLHPRYRTALPNVTSCGSRAVPARLQRSGRRRKPEVAIRSCVAPCPQEDNPQEGVQAISNVIYKLGQKPWLPRVPTQFYKHPLGRDLVLACPGARPEHAVAWDKDSVRLYRSRYLVGVNRTMRVFIDHGNHLHIRRVRFSDRGTYFCWKEGKLAASLRLRVSYEAQRRRSLDDPETIYVVKAIGVSYVLIGAVFIGVHLCRCCWRVLRFPVRI
SIO_010081: FAM187A
subclass of: SO_0000673
so part of: FAM187A
location: 426641..427885
location: region:426641-427885:1
so has part: feature:426641-427885:1:exon

XP_010722754.1
type: Protein
SIO_000068: ncbiprotein

position:426641:1
position: 426641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427885:1
position: 427885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426641-427885:1:exon

GFAP
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GFAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(428782..435087)
location: region:428782-435087:-1
so has part: feature:428782-435087:-1:exon
subclass of: SO_0000010

100550976
type: Gene
SIO_000068: ncbigene

position:428782:-1
position: 428782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435087:-1
position: 435087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428782-435087:-1:exon

GFAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GFAP
product: glial fibrillary acidic protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_003213006.4
SIO_010081: GFAP
subclass of: SO_0000673
so part of: GFAP
location: complement(join(428782..429885,430019..430104,431021..431064,431206..431426,431537..431662,431769..431930,431998..432093,432259..432319,433398..435087))
location: region:428782-435087:-1
so has part: feature:433398-435087:-1:exon
so has part: feature:432259-432319:-1:exon
so has part: feature:431998-432093:-1:exon
so has part: feature:431769-431930:-1:exon
so has part: feature:431537-431662:-1:exon
so has part: feature:431206-431426:-1:exon
so has part: feature:431021-431064:-1:exon
so has part: feature:430019-430104:-1:exon
so has part: feature:428782-429885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:433398-435087:-1:exon

position:433398:-1
position: 433398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:432259-432319:-1:exon

position:432259:-1
position: 432259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432319:-1
position: 432319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:431998-432093:-1:exon

position:431998:-1
position: 431998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432093:-1
position: 432093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:431769-431930:-1:exon

position:431769:-1
position: 431769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431930:-1
position: 431930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431537-431662:-1:exon

position:431537:-1
position: 431537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431662:-1
position: 431662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:431206-431426:-1:exon

position:431206:-1
position: 431206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431426:-1
position: 431426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:431021-431064:-1:exon

position:431021:-1
position: 431021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431064:-1
position: 431064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:430019-430104:-1:exon

position:430019:-1
position: 430019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430104:-1
position: 430104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:428782-429885:-1:exon

position:429885:-1
position: 429885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GFAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GFAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glial fibrillary acidic protein
translation: MESRRLSYGRRFGPAGSARSPTERPRSRSSQPAPRTSGRMDFSLVNVLNSEFRETRTNEKVEMMELNDRFASYIEKVRLLEQRNKVLVLELNRAREQEPSRLADVYQEELRELRRRVELLGTAKARAEVQRDGLAEELGSLREKLQQEVTLRLEAESTLAAYRQDVDAAALARLDLERRVGSLQDEVAFLQKVHEEELRELQEQLAQHRVHVEVDASKPDLTAALRDIRTQYEAMAASNMQETEEWYKSKFADLTDAAARHAEALRAAKHEANEYRRQLQALTCDLEALRGSNESLERQLRELEERYALETSAYQDTVGRLEEDIRSLKEEMARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITVPVQSFSNLQIRETSLDTKSVSEAHLKRSIVVKTVETRDGEVIKESKQEHKEVV
SIO_010081: GFAP
subclass of: SO_0000673
so part of: GFAP
location: complement(join(429844..429885,430019..430104,431021..431064,431206..431426,431537..431662,431769..431930,431998..432093,432259..432319,433398..433828))
location: region:429844-433828:-1
so has part: feature:433398-433828:-1:exon
so has part: feature:432259-432319:-1:exon
so has part: feature:431998-432093:-1:exon
so has part: feature:431769-431930:-1:exon
so has part: feature:431537-431662:-1:exon
so has part: feature:431206-431426:-1:exon
so has part: feature:431021-431064:-1:exon
so has part: feature:430019-430104:-1:exon
so has part: feature:429844-429885:-1:exon

XP_003213054.1
type: Protein
SIO_000068: ncbiprotein

position:429844:-1
position: 429844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433828:-1
position: 433828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433398-433828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432259-432319:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:431998-432093:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431769-431930:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431537-431662:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:431206-431426:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431021-431064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:430019-430104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:429844-429885:-1:exon

KIF18B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KIF18B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(435179..442245)
location: region:435179-442245:-1
so has part: feature:435179-442245:-1:exon
subclass of: SO_0000010

100551129
type: Gene
SIO_000068: ncbigene

position:435179:-1
position: 435179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442245:-1
position: 442245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435179-442245:-1:exon

KIF18B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KIF18B
product: kinesin family member 18B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019623329.1
SIO_010081: KIF18B
subclass of: SO_0000673
so part of: KIF18B
location: complement(join(435179..435576,435846..435931,436042..436137,436242..436749,437116..437309,437434..437549,437730..437805,437980..438098,438249..438323,438660..438836,438912..439109,439804..439914,440077..440181,440611..440796,442138..442245))
location: region:435179-442245:-1
so has part: feature:442138-442245:-1:exon
so has part: feature:440611-440796:-1:exon
so has part: feature:440077-440181:-1:exon
so has part: feature:439804-439914:-1:exon
so has part: feature:438912-439109:-1:exon
so has part: feature:438660-438836:-1:exon
so has part: feature:438249-438323:-1:exon
so has part: feature:437980-438098:-1:exon
so has part: feature:437730-437805:-1:exon
so has part: feature:437434-437549:-1:exon
so has part: feature:437116-437309:-1:exon
so has part: feature:436242-436749:-1:exon
so has part: feature:436042-436137:-1:exon
so has part: feature:435846-435931:-1:exon
so has part: feature:435179-435576:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442138-442245:-1:exon

position:442138:-1
position: 442138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440611-440796:-1:exon

position:440611:-1
position: 440611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440796:-1
position: 440796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:440077-440181:-1:exon

position:440077:-1
position: 440077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440181:-1
position: 440181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:439804-439914:-1:exon

position:439804:-1
position: 439804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439914:-1
position: 439914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:438912-439109:-1:exon

position:438912:-1
position: 438912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439109:-1
position: 439109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:438660-438836:-1:exon

position:438660:-1
position: 438660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438836:-1
position: 438836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:438249-438323:-1:exon

position:438249:-1
position: 438249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438323:-1
position: 438323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:437980-438098:-1:exon

position:437980:-1
position: 437980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438098:-1
position: 438098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:437730-437805:-1:exon

position:437730:-1
position: 437730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437805:-1
position: 437805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:437434-437549:-1:exon

position:437434:-1
position: 437434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437549:-1
position: 437549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:437116-437309:-1:exon

position:437116:-1
position: 437116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437309:-1
position: 437309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:436242-436749:-1:exon

position:436242:-1
position: 436242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436749:-1
position: 436749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:436042-436137:-1:exon

position:436042:-1
position: 436042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436137:-1
position: 436137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:435846-435931:-1:exon

position:435846:-1
position: 435846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435931:-1
position: 435931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:435179-435576:-1:exon

position:435576:-1
position: 435576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIF18B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KIF18B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF18B
translation: MSRDADEPTGGNGANGQSEGREGLPGDLNAEGRKWRFQTPLSLFAVFAYGATGAGKTYTMLGSEQSPGIMYLTMVELYRRIEARRDEKSCEVLVSYQEVYNEQIHDLLEPKGPLAIREDPEKGVVVQGLSFHQPKSAEQLLEMLANGNKNRTQHPTDANATSSRSHAVFQIYVKQQDRVVGLAQDLQVAKMSLIDLAGSERASVTNTRGERLREGANINRSLLALINVINALADAKSKKTHIPYRDSKLTRLLKDSIGGNCRTIMIAAVSPSSLAYEDTYNTLKYANRAKEIKLSLKSNVLSLDCHISKYATICEQLKTEVADLRAKLRAYEDAAQDAGKQIPVLLPSPRWGCGAGGKKSACRESDGEQQELGAGQDAQLEGEEEVPEEMPPSSPSPTQQADLQLGMKKPNRLPQRLSRSHTDTLIATILSVAQKQYSLLKAANLLTPDMVSEFEELQLLVQQEAAVSLQPTETSGAPPALRTQRGCDASAPTFSTEPRVPMTRAALRRLQQLTPLSSPKLAVKKRRRSEMSNTSRLETPHSLNVRAKRQRKSSPLSAGGEAEALQSPHTPCLTEPQSPQLLPCCIPKICPLTVTKRRVPLMTSAAQNCCTPTVCDLNVTYSLSEDVAKPGVVSLPQFPGWENALCALKKQEGPFVPRASIPVFSMKGSSIPKLSSVSKGSVQKRRRAVSTASRSLGGIQGRITSNSSRRSAQPQSIPEHPPPGLTWKRWGGPRELAARDGAPTAPTSQAVKPLC
SIO_010081: KIF18B
subclass of: SO_0000673
so part of: KIF18B
location: complement(join(435464..435576,435846..435931,436042..436137,436242..436749,437116..437309,437434..437549,437730..437805,437980..438098,438249..438323,438660..438836,438912..439109,439804..439914,440077..440181,440611..440796,442138..442245))
location: region:435464-442245:-1
so has part: feature:442138-442245:-1:exon
so has part: feature:440611-440796:-1:exon
so has part: feature:440077-440181:-1:exon
so has part: feature:439804-439914:-1:exon
so has part: feature:438912-439109:-1:exon
so has part: feature:438660-438836:-1:exon
so has part: feature:438249-438323:-1:exon
so has part: feature:437980-438098:-1:exon
so has part: feature:437730-437805:-1:exon
so has part: feature:437434-437549:-1:exon
so has part: feature:437116-437309:-1:exon
so has part: feature:436242-436749:-1:exon
so has part: feature:436042-436137:-1:exon
so has part: feature:435846-435931:-1:exon
so has part: feature:435464-435576:-1:exon

XP_019478874.1
type: Protein
SIO_000068: ncbiprotein

position:435464:-1
position: 435464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:442138-442245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440611-440796:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:440077-440181:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439804-439914:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:438912-439109:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:438660-438836:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:438249-438323:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:437980-438098:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:437730-437805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:437434-437549:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:437116-437309:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:436242-436749:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:436042-436137:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:435846-435931:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:435464-435576:-1:exon

C1QL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: C1QL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(443012..448738)
location: region:443012-448738:-1
so has part: feature:443012-448738:-1:exon
subclass of: SO_0000010

104914560
type: Gene
SIO_000068: ncbigene

position:443012:-1
position: 443012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448738:-1
position: 448738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443012-448738:-1:exon

C1QL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: C1QL1
product: complement C1q like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724467.2
SIO_010081: C1QL1
subclass of: SO_0000673
so part of: C1QL1
location: complement(join(443012..443520,446974..447211,448584..448738))
location: region:443012-448738:-1
so has part: feature:448584-448738:-1:exon
so has part: feature:446974-447211:-1:exon
so has part: feature:443012-443520:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448584-448738:-1:exon

position:448584:-1
position: 448584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446974-447211:-1:exon

position:446974:-1
position: 446974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447211:-1
position: 447211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:443012-443520:-1:exon

position:443520:-1
position: 443520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C1QL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: C1QL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C1q-related factor
translation: MPAVTSGRSAPQPPVLGCGTRGDTRRSAATKAPGTERGVPQGFVPAITVSAITATYSTVPRVAFYAGLKNPHEGYEILKFDDVVTNLGNSYDAASGKFTCVIPGTYFFTYHVLMRGGDGTSMWADLCKNGQVRASAIAQDADQNYDYASNSVILHLDAGDEVFIKLDGGKAHGGNNNKYSTFSGFIIYSD
SIO_010081: C1QL1
subclass of: SO_0000673
so part of: C1QL1
location: complement(join(443341..443520,446974..447211,448584..448738))
location: region:443341-448738:-1
so has part: feature:448584-448738:-1:exon
so has part: feature:446974-447211:-1:exon
so has part: feature:443341-443520:-1:exon

XP_010722769.1
type: Protein
SIO_000068: ncbiprotein

position:443341:-1
position: 443341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448584-448738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446974-447211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443341-443520:-1:exon

DCAKD
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DCAKD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(454832..460182)
location: region:454832-460182:-1
so has part: feature:454832-460182:-1:exon
subclass of: SO_0000010

104914558
type: Gene
SIO_000068: ncbigene

position:454832:-1
position: 454832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460182:-1
position: 460182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454832-460182:-1:exon

DCAKD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DCAKD
product: dephospho-CoA kinase domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_010724454.2
SIO_010081: DCAKD
subclass of: SO_0000673
so part of: DCAKD
location: complement(join(454832..456313,457797..457914,460007..460182))
location: region:454832-460182:-1
so has part: feature:460007-460182:-1:exon
so has part: feature:457797-457914:-1:exon
so has part: feature:454832-456313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460007-460182:-1:exon

position:460007:-1
position: 460007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:457797-457914:-1:exon

position:457797:-1
position: 457797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457914:-1
position: 457914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:454832-456313:-1:exon

position:456313:-1
position: 456313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCAKD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DCAKD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dephospho-CoA kinase domain-containing protein
translation: MSYTAWCAKPAASAMFLVGLSGGIASGKSTVVAVLRELGCAVIDADVIAREVVQPRLKAYQQIVRCFGPEILQESGEIDREALGNIIFSHPEKRRLLNAITHPEIQKEMLKQVLKYFVLGKGDRGCWLSPCQRGERDREGDRSRAE
SIO_010081: DCAKD
subclass of: SO_0000673
so part of: DCAKD
location: complement(join(456027..456313,457797..457914,460007..460042))
location: region:456027-460042:-1
so has part: feature:460007-460042:-1:exon
so has part: feature:457797-457914:-1:exon
so has part: feature:456027-456313:-1:exon

XP_010722756.1
type: Protein
SIO_000068: ncbiprotein

position:456027:-1
position: 456027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460042:-1
position: 460042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460007-460042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:457797-457914:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456027-456313:-1:exon

NMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 460252..469653
location: region:460252-469653:1
so has part: feature:460252-469653:1:exon
subclass of: SO_0000010

100550671
type: Gene
SIO_000068: ncbigene

position:460252:1
position: 460252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469653:1
position: 469653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460252-469653:1:exon

NMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NMT1
product: N-myristoyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003213004.4
SIO_010081: NMT1
subclass of: SO_0000673
so part of: NMT1
location: join(460252..460425,463291..463402,463960..464104,464887..465005,465192..465283,465701..465817,466231..466401,466770..466878,467485..467655,468170..468337,468480..468617,469368..469653)
location: region:460252-469653:1
so has part: feature:460252-460425:1:exon
so has part: feature:463291-463402:1:exon
so has part: feature:463960-464104:1:exon
so has part: feature:464887-465005:1:exon
so has part: feature:465192-465283:1:exon
so has part: feature:465701-465817:1:exon
so has part: feature:466231-466401:1:exon
so has part: feature:466770-466878:1:exon
so has part: feature:467485-467655:1:exon
so has part: feature:468170-468337:1:exon
so has part: feature:468480-468617:1:exon
so has part: feature:469368-469653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460252-460425:1:exon

position:460425:1
position: 460425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463291-463402:1:exon

position:463291:1
position: 463291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463402:1
position: 463402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:463960-464104:1:exon

position:463960:1
position: 463960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464104:1
position: 464104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464887-465005:1:exon

position:464887:1
position: 464887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465005:1
position: 465005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:465192-465283:1:exon

position:465192:1
position: 465192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465283:1
position: 465283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:465701-465817:1:exon

position:465701:1
position: 465701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465817:1
position: 465817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:466231-466401:1:exon

position:466231:1
position: 466231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466401:1
position: 466401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:466770-466878:1:exon

position:466770:1
position: 466770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466878:1
position: 466878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:467485-467655:1:exon

position:467485:1
position: 467485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467655:1
position: 467655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:468170-468337:1:exon

position:468170:1
position: 468170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468337:1
position: 468337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:468480-468617:1:exon

position:468480:1
position: 468480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468617:1
position: 468617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:469368-469653:1:exon

position:469368:1
position: 469368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycylpeptide N-tetradecanoyltransferase 1
translation: MADDSETAVRRPLARPQRPSSEENDHEHCSDCENEAERGSKRGGLSPVNDSGAKKKKKKPKRKKEKGGDQPDQAQDQPMKVNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSKKLVGFISAIPATIHIYETEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTPGLRPMEHKDIPAVHKLLTEYLKHFHLTPVMSREEVEHWFLPQENIIDTFVVESTPGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTKTPLIDLMSDALILAKSKGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPSMAPEKVGLVLQ
SIO_010081: NMT1
subclass of: SO_0000673
so part of: NMT1
location: join(460298..460425,463291..463402,463960..464104,464887..465005,465192..465283,465701..465817,466231..466401,466770..466878,467485..467655,468170..468337,468480..468617,469368..469388)
location: region:460298-469388:1
so has part: feature:460298-460425:1:exon
so has part: feature:463291-463402:1:exon
so has part: feature:463960-464104:1:exon
so has part: feature:464887-465005:1:exon
so has part: feature:465192-465283:1:exon
so has part: feature:465701-465817:1:exon
so has part: feature:466231-466401:1:exon
so has part: feature:466770-466878:1:exon
so has part: feature:467485-467655:1:exon
so has part: feature:468170-468337:1:exon
so has part: feature:468480-468617:1:exon
so has part: feature:469368-469388:1:exon

XP_003213052.1
type: Protein
SIO_000068: ncbiprotein

position:460298:1
position: 460298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469388:1
position: 469388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460298-460425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463291-463402:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:463960-464104:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464887-465005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:465192-465283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:465701-465817:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:466231-466401:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:466770-466878:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467485-467655:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468170-468337:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:468480-468617:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:469368-469388:1:exon

PLCD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PLCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(470432..480381)
location: region:470432-480381:-1
so has part: feature:470432-480381:-1:exon
subclass of: SO_0000010

100551436
type: Gene
SIO_000068: ncbigene

position:470432:-1
position: 470432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480381:-1
position: 480381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470432-480381:-1:exon

PLCD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PLCD3
product: phospholipase C delta 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_010724456.3
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(470432..470951,471020..471169,471541..471676,471826..471974,472046..472162,472534..472693,472878..473003,473069..473221,473302..473446,473573..473774,474428..474653,475034..475163,475782..476010,477926..478084,479669..480374))
location: region:470432-480374:-1
so has part: feature:479669-480374:-1:exon
so has part: feature:477926-478084:-1:exon
so has part: feature:475782-476010:-1:exon
so has part: feature:475034-475163:-1:exon
so has part: feature:474428-474653:-1:exon
so has part: feature:473573-473774:-1:exon
so has part: feature:473302-473446:-1:exon
so has part: feature:473069-473221:-1:exon
so has part: feature:472878-473003:-1:exon
so has part: feature:472534-472693:-1:exon
so has part: feature:472046-472162:-1:exon
so has part: feature:471826-471974:-1:exon
so has part: feature:471541-471676:-1:exon
so has part: feature:471020-471169:-1:exon
so has part: feature:470432-470951:-1:exon

position:480374:-1
position: 480374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479669-480374:-1:exon

position:479669:-1
position: 479669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477926-478084:-1:exon

position:477926:-1
position: 477926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478084:-1
position: 478084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:475782-476010:-1:exon

position:475782:-1
position: 475782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476010:-1
position: 476010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:475034-475163:-1:exon

position:475034:-1
position: 475034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475163:-1
position: 475163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:474428-474653:-1:exon

position:474428:-1
position: 474428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474653:-1
position: 474653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:473573-473774:-1:exon

position:473573:-1
position: 473573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473774:-1
position: 473774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:473302-473446:-1:exon

position:473302:-1
position: 473302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473446:-1
position: 473446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:473069-473221:-1:exon

position:473069:-1
position: 473069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473221:-1
position: 473221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:472878-473003:-1:exon

position:472878:-1
position: 472878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:473003:-1
position: 473003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:472534-472693:-1:exon

position:472534:-1
position: 472534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472693:-1
position: 472693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:472046-472162:-1:exon

position:472046:-1
position: 472046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:472162:-1
position: 472162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:471826-471974:-1:exon

position:471826:-1
position: 471826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471974:-1
position: 471974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:471541-471676:-1:exon

position:471541:-1
position: 471541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471676:-1
position: 471676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:471020-471169:-1:exon

position:471020:-1
position: 471020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471169:-1
position: 471169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:470432-470951:-1:exon

position:470951:-1
position: 470951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLCD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PLCD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-3
translation: MGEGGWLHGRACKHTYTHVCARTHVHMAAHTHTYVHAILLPPPSDPKSLLQTQPPGSLPVPPRSSPHGPGSAGRLICGRRARPRPEQSGGVLKKLGLSEDEDLQLMLQGSLLLKVTSRRAKERRYRLQEDGITVVSERRFGRMASKHSFSVAHIVSVHRGHHSEGLRRYGCAIPEWNCFTITFEGGRRNLDLGARDEDVALRWVRGLRTLRGRLRGMSQRERLEHWIHGMLQRADKDKDNRMCFQEVQIMLRMANIHMDNAYAHQLFKECDHSGDGRLEDQELEDFCRRLLRRPELEELFGHYSGEDCVLSAEELRDFLQDQGEEGTLHQACAIICAHELNEKARQQGLMTLDGFTMYLLSAAGDILNQEHTEVHQDMSQPLCHYFISSSHNTYLTRNQIGGTSSTEAYVRALMMGCRCVELDCWEGPDGEPIVCHGHTFTSKILFRDVIEAIRDCAFKRSPYPVILSLENHCGVEQQATMARHMKAILGDMLLTQPLEGQDPGVLPSPEQLKGKVLVKGKKLPELQCETCSVTSIPDEEEEEETEEEDRLQAKDASHVAPELSAMVVYCQATPFPGLAQALQQPRPYEMSSFSERKARKLIKEAGPTFVHYTSRQLSRVYPLGLKMTSSNYNPQEMWNAGCQLVALNFQTPGYEMDLNTGRFLGNGGCGYVLKPQFLRSPHSGSPHPLVLRIRVITAQQLPKLNREKLSSIVDPFVRVEIYGVTADCSKQQTAYRSNNGFNPRWEETLTFQLRVPELALVRFVVEDHDSTSCNDFVGQFTLPLGSMREGYRHIHLLSKDGASLAPATLFVHVTCKRP
SIO_010081: PLCD3
subclass of: SO_0000673
so part of: PLCD3
location: complement(join(470863..470951,471020..471169,471541..471676,471826..471974,472046..472162,472534..472693,472878..473003,473069..473221,473302..473446,473573..473774,474428..474653,475034..475163,475782..476010,477926..478084,479669..479954))
location: region:470863-479954:-1
so has part: feature:479669-479954:-1:exon
so has part: feature:477926-478084:-1:exon
so has part: feature:475782-476010:-1:exon
so has part: feature:475034-475163:-1:exon
so has part: feature:474428-474653:-1:exon
so has part: feature:473573-473774:-1:exon
so has part: feature:473302-473446:-1:exon
so has part: feature:473069-473221:-1:exon
so has part: feature:472878-473003:-1:exon
so has part: feature:472534-472693:-1:exon
so has part: feature:472046-472162:-1:exon
so has part: feature:471826-471974:-1:exon
so has part: feature:471541-471676:-1:exon
so has part: feature:471020-471169:-1:exon
so has part: feature:470863-470951:-1:exon

XP_010722758.1
type: Protein
SIO_000068: ncbiprotein

position:470863:-1
position: 470863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479954:-1
position: 479954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479669-479954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477926-478084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475782-476010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475034-475163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474428-474653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473573-473774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473302-473446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:473069-473221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:472878-473003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:472534-472693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:472046-472162:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:471826-471974:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471541-471676:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:471020-471169:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:470863-470951:-1:exon

PLCD3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: PLCD3
product: phospholipase C delta 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_004162083.1
SIO_010081: PLCD3
so part of: PLCD3
location: complement(join(471028..471169,471541..471676,472046..472175,472534..472693,472878..473003,473069..473221,473302..473446,473573..473774,474428..474653,475034..475163,475782..476010,477926..478084,479669..480381))
location: region:471028-480381:-1
so has part: feature:479669-480381:-1:exon
so has part: feature:477926-478084:-1:exon
so has part: feature:475782-476010:-1:exon
so has part: feature:475034-475163:-1:exon
so has part: feature:474428-474653:-1:exon
so has part: feature:473573-473774:-1:exon
so has part: feature:473302-473446:-1:exon
so has part: feature:473069-473221:-1:exon
so has part: feature:472878-473003:-1:exon
so has part: feature:472534-472693:-1:exon
so has part: feature:472046-472175:-1:exon
so has part: feature:471541-471676:-1:exon
so has part: feature:471028-471169:-1:exon

position:471028:-1
position: 471028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479669-480381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477926-478084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475782-476010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475034-475163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474428-474653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473573-473774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473302-473446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:473069-473221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:472878-473003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:472534-472693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:472046-472175:-1:exon

position:472175:-1
position: 472175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:471541-471676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471028-471169:-1:exon

PLCD3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: PLCD3
product: phospholipase C delta 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XR_002121784.2
SIO_010081: PLCD3
so part of: PLCD3
location: complement(join(471028..471169,471541..471676,472046..472162,472534..472693,472878..473003,473069..473221,473302..473446,473573..473774,474428..474653,475034..475163,475782..476010,477926..478084,479669..480379))
location: region:471028-480379:-1
so has part: feature:479669-480379:-1:exon
so has part: feature:477926-478084:-1:exon
so has part: feature:475782-476010:-1:exon
so has part: feature:475034-475163:-1:exon
so has part: feature:474428-474653:-1:exon
so has part: feature:473573-473774:-1:exon
so has part: feature:473302-473446:-1:exon
so has part: feature:473069-473221:-1:exon
so has part: feature:472878-473003:-1:exon
so has part: feature:472534-472693:-1:exon
so has part: feature:472046-472162:-1:exon
so has part: feature:471541-471676:-1:exon
so has part: feature:471028-471169:-1:exon

position:480379:-1
position: 480379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479669-480379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477926-478084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475782-476010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475034-475163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474428-474653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473573-473774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473302-473446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:473069-473221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:472878-473003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:472534-472693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:472046-472162:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:471541-471676:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471028-471169:-1:exon

PLCD3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: PLCD3
product: phospholipase C delta 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XR_004162082.1
SIO_010081: PLCD3
so part of: PLCD3
location: complement(join(471545..471676,471826..471974,472046..472175,472534..472693,472878..473003,473069..473221,473302..473446,473573..473774,474428..474653,475034..475163,475782..476010,477926..478084,479669..480380))
location: region:471545-480380:-1
so has part: feature:479669-480380:-1:exon
so has part: feature:477926-478084:-1:exon
so has part: feature:475782-476010:-1:exon
so has part: feature:475034-475163:-1:exon
so has part: feature:474428-474653:-1:exon
so has part: feature:473573-473774:-1:exon
so has part: feature:473302-473446:-1:exon
so has part: feature:473069-473221:-1:exon
so has part: feature:472878-473003:-1:exon
so has part: feature:472534-472693:-1:exon
so has part: feature:472046-472175:-1:exon
so has part: feature:471826-471974:-1:exon
so has part: feature:471545-471676:-1:exon

position:471545:-1
position: 471545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480380:-1
position: 480380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479669-480380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477926-478084:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475782-476010:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475034-475163:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474428-474653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473573-473774:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:473302-473446:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:473069-473221:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:472878-473003:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:472534-472693:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:472046-472175:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:471826-471974:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:471545-471676:-1:exon

HEXIM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HEXIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <482459..486120
location: region:482459-486120:1
so has part: feature:482459-486120:1:exon
subclass of: SO_0000010

104914561
type: Gene
SIO_000068: ncbigene

position:482459:1
position: 482459
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:486120:1
position: 486120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482459-486120:1:exon

HEXIM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEXIM1
product: HEXIM P-TEFb complex subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031557026.1
SIO_010081: HEXIM1
subclass of: SO_0000673
so part of: HEXIM1
location: join(<482459..482597,483284..483649,484406..484572,484813..484854,485181..485273,485383..486120)
location: region:482459-486120:1
so has part: feature:482459-482597:1:exon
so has part: feature:483284-483649:1:exon
so has part: feature:484406-484572:1:exon
so has part: feature:484813-484854:1:exon
so has part: feature:485181-485273:1:exon
so has part: feature:485383-486120:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482459-482597:1:exon

position:482597:1
position: 482597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:483284-483649:1:exon

position:483284:1
position: 483284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483649:1
position: 483649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:484406-484572:1:exon

position:484406:1
position: 484406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484572:1
position: 484572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:484813-484854:1:exon

position:484813:1
position: 484813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484854:1
position: 484854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:485181-485273:1:exon

position:485181:1
position: 485181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485273:1
position: 485273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:485383-486120:1:exon

position:485383:1
position: 485383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEXIM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEXIM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein HEXIM1
translation: LCSLSLPADEQEQPAEHGQEERANGPASERPEDALPREQQDGQQTPAAVPAAPLLTGAAALPSAPRRFPESAARPPSSQAAGLQQGGGEESAQQEPLQLSPGLAGWRWGPGVSGPFFTLTQAGQLLAERGLVPKSVSAGCVAGRAERGEGGRREGSGGADLAARGSDRDPQLTGAEEDAGSPAVEPQLLPELDAHVAGTVRALQDDMQRVLERLSELELLTCTKDTSGADPGELLAVQAESPWPLPASPHTLLFLVAWPFVTQWLLRRWPGLRPRYRAAVGRAQEWPAKKKHRRRPSKNKRRWKPYSKLSWEEKQQFDERQSLRASRLRAEMFAKGQPVAPYNTTQFLMEDHDQEEPDLKTGLYPRRSAAKSDDTSEEDFLEEAAEEDGGSDGMGGDGSEFLQRDFSETYERYHVESLQNMSKQELVKEYLELEKCLSRMEDENNRLRMESKKHGEAVEAARLLELEVDRLRAENLQLLRERDVRAAEATPE
SIO_010081: HEXIM1
subclass of: SO_0000673
so part of: HEXIM1
location: join(<482459..482597,483284..483649,484406..484572,484813..484854,485181..485273,485383..486054)
location: region:482459-486054:1
so has part: feature:482459-482597:1:exon
so has part: feature:483284-483649:1:exon
so has part: feature:484406-484572:1:exon
so has part: feature:484813-484854:1:exon
so has part: feature:485181-485273:1:exon
so has part: feature:485383-486054:1:exon

XP_031412886.1
type: Protein
SIO_000068: ncbiprotein

position:486054:1
position: 486054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482459-482597:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:483284-483649:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484406-484572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:484813-484854:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485181-485273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:485383-486054:1:exon

LOC116217483
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217483
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(486355..489526)
location: region:486355-489526:-1
so has part: feature:486355-489526:-1:exon
subclass of: SO_0000011

116217483
type: Gene
SIO_000068: ncbigene

position:486355:-1
position: 486355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489526:-1
position: 489526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486355-489526:-1:exon

LOC116217483
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217483
product: uncharacterized LOC116217483
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 74 samples with support for all annotated introns
transcript id: XR_004162084.1
SIO_010081: LOC116217483
subclass of: SO_0000673
so part of: LOC116217483
location: complement(join(486355..486863,489299..489526))
location: region:486355-489526:-1
so has part: feature:489299-489526:-1:exon
so has part: feature:486355-486863:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:489299-489526:-1:exon

position:489299:-1
position: 489299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486355-486863:-1:exon

position:486863:-1
position: 486863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100538449
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100538449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 492018..496269
location: region:492018-496269:1
so has part: feature:492018-496269:1:exon
subclass of: SO_0000010

100538449
type: Gene
SIO_000068: ncbigene

position:492018:1
position: 492018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496269:1
position: 496269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492018-496269:1:exon

LOC100538449
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100538449
product: myosin light chain kinase, smooth muscle-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_010724458.3
SIO_010081: LOC100538449
subclass of: SO_0000673
so part of: LOC100538449
location: join(492018..492163,492991..493091,493497..493622,493774..493864,493980..494183,494312..494529,494648..494771,494849..495001,495209..495329,495413..495503,495880..496269)
location: region:492018-496269:1
so has part: feature:492018-492163:1:exon
so has part: feature:492991-493091:1:exon
so has part: feature:493497-493622:1:exon
so has part: feature:493774-493864:1:exon
so has part: feature:493980-494183:1:exon
so has part: feature:494312-494529:1:exon
so has part: feature:494648-494771:1:exon
so has part: feature:494849-495001:1:exon
so has part: feature:495209-495329:1:exon
so has part: feature:495413-495503:1:exon
so has part: feature:495880-496269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:492018-492163:1:exon

position:492163:1
position: 492163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492991-493091:1:exon

position:492991:1
position: 492991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493091:1
position: 493091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:493497-493622:1:exon

position:493497:1
position: 493497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493622:1
position: 493622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:493774-493864:1:exon

position:493774:1
position: 493774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493864:1
position: 493864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:493980-494183:1:exon

position:493980:1
position: 493980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494183:1
position: 494183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:494312-494529:1:exon

position:494312:1
position: 494312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494529:1
position: 494529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:494648-494771:1:exon

position:494648:1
position: 494648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494771:1
position: 494771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:494849-495001:1:exon

position:494849:1
position: 494849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495001:1
position: 495001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:495209-495329:1:exon

position:495209:1
position: 495209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495329:1
position: 495329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:495413-495503:1:exon

position:495413:1
position: 495413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495503:1
position: 495503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:495880-496269:1:exon

position:495880:1
position: 495880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100538449
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100538449
product: myosin light chain kinase, smooth muscle-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_010724459.3
SIO_010081: LOC100538449
subclass of: SO_0000673
so part of: LOC100538449
location: join(492019..492163,492991..493091,493497..493622,493777..493864,493980..494183,494312..494529,494648..494771,494849..495001,495209..495329,495413..495503,495880..496269)
location: region:492019-496269:1
so has part: feature:492019-492163:1:exon
so has part: feature:492991-493091:1:exon
so has part: feature:493497-493622:1:exon
so has part: feature:493777-493864:1:exon
so has part: feature:493980-494183:1:exon
so has part: feature:494312-494529:1:exon
so has part: feature:494648-494771:1:exon
so has part: feature:494849-495001:1:exon
so has part: feature:495209-495329:1:exon
so has part: feature:495413-495503:1:exon
so has part: feature:495880-496269:1:exon

position:492019:1
position: 492019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492019-492163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492991-493091:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493497-493622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493777-493864:1:exon

position:493777:1
position: 493777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:493980-494183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:494312-494529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:494648-494771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494849-495001:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495209-495329:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:495413-495503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:495880-496269:1:exon

LOC100538449
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100538449
product: myosin light chain kinase, smooth muscle-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019623382.2
SIO_010081: LOC100538449
subclass of: SO_0000673
so part of: LOC100538449
location: join(492347..492652,492991..493091,493497..493622,493774..493864,493980..494183,494312..494529,494648..494771,494849..495001,495209..495329,495413..495503,495880..496269)
location: region:492347-496269:1
so has part: feature:492347-492652:1:exon
so has part: feature:492991-493091:1:exon
so has part: feature:493497-493622:1:exon
so has part: feature:493774-493864:1:exon
so has part: feature:493980-494183:1:exon
so has part: feature:494312-494529:1:exon
so has part: feature:494648-494771:1:exon
so has part: feature:494849-495001:1:exon
so has part: feature:495209-495329:1:exon
so has part: feature:495413-495503:1:exon
so has part: feature:495880-496269:1:exon

position:492347:1
position: 492347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492347-492652:1:exon

position:492652:1
position: 492652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492991-493091:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493497-493622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493774-493864:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493980-494183:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:494312-494529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:494648-494771:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:494849-495001:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495209-495329:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:495413-495503:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:495880-496269:1:exon

LOC100538449
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100538449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase, smooth muscle-like isoform X1
translation: MSQAEAGEEDFECCDVVINSQDKVSDVYTQLEKLGEGKFGTVYQLQEKATGKIRAGKFFRTRTAKEKQAARAEVELMNLLHHPRLVQCLAAFQGPTELVMVMEYVAGGELFERIVDDDFEHTEPSSTQYMRQILEGLQYMHGQAVVHLDLKPENIVCVSPSSHWLKIIDFGLARKLAPDTPVKVLHGTPEFMAPEVVSFEPVGLATDMWSVGVICYILLSGESPFQGENDMETLSNITAARWEFEEEIFSDISQQAKDFISQLLQKDPRCRLSSPGALQHPWLQQPLPRSMKALPKERIKQFLTRRKWQKTGKALLAINRLTLLSQNPDRRASETQDEEDSCCTAEEDQGCGSLPQGDPSTSEPATGEEDNGTMEAAGKA
SIO_010081: LOC100538449
subclass of: SO_0000673
so part of: LOC100538449
location: join(493607..493622,493774..493864,493980..494183,494312..494529,494648..494771,494849..495001,495209..495329,495413..495503,495880..496004)
location: region:493607-496004:1
so has part: feature:493607-493622:1:exon
so has part: feature:493774-493864:1:exon
so has part: feature:493980-494183:1:exon
so has part: feature:494312-494529:1:exon
so has part: feature:494648-494771:1:exon
so has part: feature:494849-495001:1:exon
so has part: feature:495209-495329:1:exon
so has part: feature:495413-495503:1:exon
so has part: feature:495880-496004:1:exon

XP_019478927.1
type: Protein
SIO_000068: ncbiprotein

position:493607:1
position: 493607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496004:1
position: 496004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493607-493622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493774-493864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493980-494183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494312-494529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494648-494771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:494849-495001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495209-495329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495413-495503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495880-496004:1:exon

LOC100538449
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100538449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase, smooth muscle-like isoform X1
translation: MSQAEAGEEDFECCDVVINSQDKVSDVYTQLEKLGEGKFGTVYQLQEKATGKIRAGKFFRTRTAKEKQAARAEVELMNLLHHPRLVQCLAAFQGPTELVMVMEYVAGGELFERIVDDDFEHTEPSSTQYMRQILEGLQYMHGQAVVHLDLKPENIVCVSPSSHWLKIIDFGLARKLAPDTPVKVLHGTPEFMAPEVVSFEPVGLATDMWSVGVICYILLSGESPFQGENDMETLSNITAARWEFEEEIFSDISQQAKDFISQLLQKDPRCRLSSPGALQHPWLQQPLPRSMKALPKERIKQFLTRRKWQKTGKALLAINRLTLLSQNPDRRASETQDEEDSCCTAEEDQGCGSLPQGDPSTSEPATGEEDNGTMEAAGKA
SIO_010081: LOC100538449
subclass of: SO_0000673
so part of: LOC100538449
location: join(493607..493622,493774..493864,493980..494183,494312..494529,494648..494771,494849..495001,495209..495329,495413..495503,495880..496004)
location: region:493607-496004:1
so has part: feature:493607-493622:1:exon
so has part: feature:493774-493864:1:exon
so has part: feature:493980-494183:1:exon
so has part: feature:494312-494529:1:exon
so has part: feature:494648-494771:1:exon
so has part: feature:494849-495001:1:exon
so has part: feature:495209-495329:1:exon
so has part: feature:495413-495503:1:exon
so has part: feature:495880-496004:1:exon

XP_010722760.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493607-493622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493774-493864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493980-494183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494312-494529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494648-494771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:494849-495001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495209-495329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495413-495503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495880-496004:1:exon

LOC100538449
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100538449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain kinase, smooth muscle-like isoform X2
translation: MSQAEGEEDFECCDVVINSQDKVSDVYTQLEKLGEGKFGTVYQLQEKATGKIRAGKFFRTRTAKEKQAARAEVELMNLLHHPRLVQCLAAFQGPTELVMVMEYVAGGELFERIVDDDFEHTEPSSTQYMRQILEGLQYMHGQAVVHLDLKPENIVCVSPSSHWLKIIDFGLARKLAPDTPVKVLHGTPEFMAPEVVSFEPVGLATDMWSVGVICYILLSGESPFQGENDMETLSNITAARWEFEEEIFSDISQQAKDFISQLLQKDPRCRLSSPGALQHPWLQQPLPRSMKALPKERIKQFLTRRKWQKTGKALLAINRLTLLSQNPDRRASETQDEEDSCCTAEEDQGCGSLPQGDPSTSEPATGEEDNGTMEAAGKA
SIO_010081: LOC100538449
subclass of: SO_0000673
so part of: LOC100538449
location: join(493607..493622,493777..493864,493980..494183,494312..494529,494648..494771,494849..495001,495209..495329,495413..495503,495880..496004)
location: region:493607-496004:1
so has part: feature:493607-493622:1:exon
so has part: feature:493777-493864:1:exon
so has part: feature:493980-494183:1:exon
so has part: feature:494312-494529:1:exon
so has part: feature:494648-494771:1:exon
so has part: feature:494849-495001:1:exon
so has part: feature:495209-495329:1:exon
so has part: feature:495413-495503:1:exon
so has part: feature:495880-496004:1:exon

XP_010722761.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:493607-493622:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:493777-493864:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493980-494183:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494312-494529:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494648-494771:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:494849-495001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495209-495329:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495413-495503:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:495880-496004:1:exon

FMNL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FMNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 510022..520234
location: region:510022-520234:1
so has part: feature:510022-520234:1:exon
subclass of: SO_0000010

100538603
type: Gene
SIO_000068: ncbigene

position:510022:1
position: 510022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520234:1
position: 520234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510022-520234:1:exon

FMNL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FMNL1
product: formin like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031557027.1
SIO_010081: FMNL1
subclass of: SO_0000673
so part of: FMNL1
location: join(510022..510189,510484..510567,510659..510732,511336..511419,511634..511774,513239..513347,513626..513702,513774..513867,514197..514271,514682..514792,514900..515049,515152..515253,515354..515373,515479..515633,515873..515920,516034..516248,516794..516996,517112..517346,517432..517500,517593..517673,518114..518243,518354..518517,518649..518750,519001..519099,519315..519438,519790..519890,520148..520234)
location: region:510022-520234:1
so has part: feature:510022-510189:1:exon
so has part: feature:510484-510567:1:exon
so has part: feature:510659-510732:1:exon
so has part: feature:511336-511419:1:exon
so has part: feature:511634-511774:1:exon
so has part: feature:513239-513347:1:exon
so has part: feature:513626-513702:1:exon
so has part: feature:513774-513867:1:exon
so has part: feature:514197-514271:1:exon
so has part: feature:514682-514792:1:exon
so has part: feature:514900-515049:1:exon
so has part: feature:515152-515253:1:exon
so has part: feature:515354-515373:1:exon
so has part: feature:515479-515633:1:exon
so has part: feature:515873-515920:1:exon
so has part: feature:516034-516248:1:exon
so has part: feature:516794-516996:1:exon
so has part: feature:517112-517346:1:exon
so has part: feature:517432-517500:1:exon
so has part: feature:517593-517673:1:exon
so has part: feature:518114-518243:1:exon
so has part: feature:518354-518517:1:exon
so has part: feature:518649-518750:1:exon
so has part: feature:519001-519099:1:exon
so has part: feature:519315-519438:1:exon
so has part: feature:519790-519890:1:exon
so has part: feature:520148-520234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510022-510189:1:exon

position:510189:1
position: 510189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510484-510567:1:exon

position:510484:1
position: 510484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510567:1
position: 510567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:510659-510732:1:exon

position:510659:1
position: 510659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510732:1
position: 510732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:511336-511419:1:exon

position:511336:1
position: 511336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511419:1
position: 511419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:511634-511774:1:exon

position:511634:1
position: 511634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511774:1
position: 511774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:513239-513347:1:exon

position:513239:1
position: 513239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513347:1
position: 513347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:513626-513702:1:exon

position:513626:1
position: 513626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513702:1
position: 513702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:513774-513867:1:exon

position:513774:1
position: 513774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513867:1
position: 513867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:514197-514271:1:exon

position:514197:1
position: 514197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514271:1
position: 514271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:514682-514792:1:exon

position:514682:1
position: 514682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514792:1
position: 514792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:514900-515049:1:exon

position:514900:1
position: 514900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515049:1
position: 515049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:515152-515253:1:exon

position:515152:1
position: 515152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515253:1
position: 515253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:515354-515373:1:exon

position:515354:1
position: 515354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515373:1
position: 515373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:515479-515633:1:exon

position:515479:1
position: 515479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515633:1
position: 515633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:515873-515920:1:exon

position:515873:1
position: 515873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515920:1
position: 515920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:516034-516248:1:exon

position:516034:1
position: 516034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516248:1
position: 516248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:516794-516996:1:exon

position:516794:1
position: 516794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516996:1
position: 516996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:517112-517346:1:exon

position:517112:1
position: 517112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517346:1
position: 517346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:517432-517500:1:exon

position:517432:1
position: 517432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517500:1
position: 517500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:517593-517673:1:exon

position:517593:1
position: 517593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517673:1
position: 517673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:518114-518243:1:exon

position:518114:1
position: 518114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518243:1
position: 518243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:518354-518517:1:exon

position:518354:1
position: 518354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518517:1
position: 518517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:518649-518750:1:exon

position:518649:1
position: 518649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518750:1
position: 518750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:519001-519099:1:exon

position:519001:1
position: 519001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519099:1
position: 519099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:519315-519438:1:exon

position:519315:1
position: 519315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519438:1
position: 519438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:519790-519890:1:exon

position:519790:1
position: 519790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519890:1
position: 519890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:520148-520234:1:exon

position:520148:1
position: 520148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FMNL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FMNL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like protein 1
translation: MGSTLCPEGTLGTAVPLTPVSPQSSMNLPPDKMKLLSQYDNEKKWELVCDQERFQVKNPPSAYIQKLKSYLDTGGVSRKFKRRVQESTQVLRELEISLRTNYIGWVQEFLNEENKGLDVLLEYLAFAQCSVAYDMESTENGSPGSEKGKPLERSVEDLSKSNSSSPTHSISKVRHLTVRLNPSHSRKALRNSRIVNQKDDVHVCIMCLRAIMNYQSGFSLVMNHPACVNEITLSLNNRNARTKALVLELLAAVCLVRGGHDIILAAFDNFKEVCGEKNRFEKLMEYFRNEDSNIDFMVACMQFINIVVHSVENMNFRVFLQYEFTHLGLDQYLESLRLTESDKLQVQIQAYLDNVFDVGAMLEDSETKTAVLEHMEELEEHVSQLTEKLQDAENDSMAKIAELEKQLSQARRELEALREQLSPPRALERRLAELEEKGLVQILRGPDGDVAIEIVPVVIETTAAPMVTGEATATSTDTPAPAPSPAPAPAAPRELVLGMLGCFCEHTGLGLAPPVTLPCSHPAVKVKKPIQTKFRMPVFNWVALKPSQIDGTVFTELNDEKVLQELDMSDFEEQFKTKAQGPGLDISALKVKATQKAPSKVTLMESNRAKNLAITLRKGGRSIQDICMAIETYDQQALSLDFLELLLRFLPTEYERTLIGKFEREQQPAEELSEEDQFMIRFSKIPRLAERMNVMIFLGNFSDTAQLLMPQLNAIIAASMSLKSSSKLRNILEIVLAFGNYMNSSKRGAAYGFRLQSLDALLEMKSTDRKQTLLHYLVRVITEKYPELTGFHTELHFLDKAGTVSLDGVLQDVRSLQQGMELTRKEFMRQDDSLVLKEFLKANTELMEKLQADSKTAKEAYESAVEYFGENPKTSPPTTFFPMFMRFIRAYKKAEQDIELWKKQEAAAKEAESGRPGSEEQLDLKSPFQKAKRQQMDMIAELKKKQMVKEPLIYEGKDGAIEDIISALKTVPFTARTGKRSSRLFCDVSFSEESPL
SIO_010081: FMNL1
subclass of: SO_0000673
so part of: FMNL1
location: join(510037..510189,510484..510567,510659..510732,511336..511419,511634..511774,513239..513347,513626..513702,513774..513867,514197..514271,514682..514792,514900..515049,515152..515253,515354..515373,515479..515633,515873..515920,516034..516248,516794..516996,517112..517346,517432..517500,517593..517673,518114..518243,518354..518517,518649..518750,519001..519099,519315..519438,519790..519881)
location: region:510037-519881:1
so has part: feature:510037-510189:1:exon
so has part: feature:510484-510567:1:exon
so has part: feature:510659-510732:1:exon
so has part: feature:511336-511419:1:exon
so has part: feature:511634-511774:1:exon
so has part: feature:513239-513347:1:exon
so has part: feature:513626-513702:1:exon
so has part: feature:513774-513867:1:exon
so has part: feature:514197-514271:1:exon
so has part: feature:514682-514792:1:exon
so has part: feature:514900-515049:1:exon
so has part: feature:515152-515253:1:exon
so has part: feature:515354-515373:1:exon
so has part: feature:515479-515633:1:exon
so has part: feature:515873-515920:1:exon
so has part: feature:516034-516248:1:exon
so has part: feature:516794-516996:1:exon
so has part: feature:517112-517346:1:exon
so has part: feature:517432-517500:1:exon
so has part: feature:517593-517673:1:exon
so has part: feature:518114-518243:1:exon
so has part: feature:518354-518517:1:exon
so has part: feature:518649-518750:1:exon
so has part: feature:519001-519099:1:exon
so has part: feature:519315-519438:1:exon
so has part: feature:519790-519881:1:exon

XP_031412887.1
type: Protein
SIO_000068: ncbiprotein

position:510037:1
position: 510037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519881:1
position: 519881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510037-510189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510484-510567:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:510659-510732:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:511336-511419:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:511634-511774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:513239-513347:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:513626-513702:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513774-513867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:514197-514271:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:514682-514792:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:514900-515049:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:515152-515253:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:515354-515373:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:515479-515633:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:515873-515920:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:516034-516248:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:516794-516996:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:517112-517346:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:517432-517500:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:517593-517673:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:518114-518243:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:518354-518517:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:518649-518750:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:519001-519099:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:519315-519438:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:519790-519881:1:exon

MAP3K14
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MAP3K14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(521898..536772)
location: region:521898-536772:-1
so has part: feature:521898-536772:-1:exon
subclass of: SO_0000010

100538760
type: Gene
SIO_000068: ncbigene

position:521898:-1
position: 521898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536772:-1
position: 536772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:521898-536772:-1:exon

MAP3K14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MAP3K14
product: mitogen-activated protein kinase kinase kinase 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010724461.3
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: complement(join(521898..523397,523713..523813,524334..524478,525155..525261,525501..525845,526427..526577,526929..527092,527716..527820,528191..528322,528939..529068,529515..529652,530082..530690,530817..531027,531876..531945,532409..532679,536299..536772))
location: region:521898-536772:-1
so has part: feature:536299-536772:-1:exon
so has part: feature:532409-532679:-1:exon
so has part: feature:531876-531945:-1:exon
so has part: feature:530817-531027:-1:exon
so has part: feature:530082-530690:-1:exon
so has part: feature:529515-529652:-1:exon
so has part: feature:528939-529068:-1:exon
so has part: feature:528191-528322:-1:exon
so has part: feature:527716-527820:-1:exon
so has part: feature:526929-527092:-1:exon
so has part: feature:526427-526577:-1:exon
so has part: feature:525501-525845:-1:exon
so has part: feature:525155-525261:-1:exon
so has part: feature:524334-524478:-1:exon
so has part: feature:523713-523813:-1:exon
so has part: feature:521898-523397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536299-536772:-1:exon

position:536299:-1
position: 536299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:532409-532679:-1:exon

position:532409:-1
position: 532409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532679:-1
position: 532679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531876-531945:-1:exon

position:531876:-1
position: 531876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531945:-1
position: 531945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:530817-531027:-1:exon

position:530817:-1
position: 530817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531027:-1
position: 531027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:530082-530690:-1:exon

position:530082:-1
position: 530082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530690:-1
position: 530690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:529515-529652:-1:exon

position:529515:-1
position: 529515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529652:-1
position: 529652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:528939-529068:-1:exon

position:528939:-1
position: 528939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529068:-1
position: 529068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:528191-528322:-1:exon

position:528191:-1
position: 528191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528322:-1
position: 528322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:527716-527820:-1:exon

position:527716:-1
position: 527716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527820:-1
position: 527820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:526929-527092:-1:exon

position:526929:-1
position: 526929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527092:-1
position: 527092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:526427-526577:-1:exon

position:526427:-1
position: 526427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526577:-1
position: 526577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:525501-525845:-1:exon

position:525501:-1
position: 525501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525845:-1
position: 525845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:525155-525261:-1:exon

position:525155:-1
position: 525155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525261:-1
position: 525261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:524334-524478:-1:exon

position:524334:-1
position: 524334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524478:-1
position: 524478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:523713-523813:-1:exon

position:523713:-1
position: 523713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523813:-1
position: 523813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:521898-523397:-1:exon

position:523397:-1
position: 523397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAP3K14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MAP3K14
product: mitogen-activated protein kinase kinase kinase 14, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_019623383.2
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: complement(join(521898..523397,523713..523813,524334..524478,525155..525261,525501..525845,526427..526577,526929..527092,527716..527820,528191..528322,528939..529068,529515..529652,530082..530690,530817..531027,531876..531945,532409..532679,533375..535024))
location: region:521898-535024:-1
so has part: feature:533375-535024:-1:exon
so has part: feature:532409-532679:-1:exon
so has part: feature:531876-531945:-1:exon
so has part: feature:530817-531027:-1:exon
so has part: feature:530082-530690:-1:exon
so has part: feature:529515-529652:-1:exon
so has part: feature:528939-529068:-1:exon
so has part: feature:528191-528322:-1:exon
so has part: feature:527716-527820:-1:exon
so has part: feature:526929-527092:-1:exon
so has part: feature:526427-526577:-1:exon
so has part: feature:525501-525845:-1:exon
so has part: feature:525155-525261:-1:exon
so has part: feature:524334-524478:-1:exon
so has part: feature:523713-523813:-1:exon
so has part: feature:521898-523397:-1:exon

position:535024:-1
position: 535024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:533375-535024:-1:exon

position:533375:-1
position: 533375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:532409-532679:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531876-531945:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530817-531027:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530082-530690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529515-529652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:528939-529068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:528191-528322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:527716-527820:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526929-527092:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526427-526577:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:525501-525845:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525155-525261:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524334-524478:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:523713-523813:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:521898-523397:-1:exon

MAP3K14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MAP3K14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 14
translation: MAVMGIACHGAPAPPAKQQQELSATKGLHEAASEKQNSVCKVEDPKKAIFHSQWKILNDVITKGTAKEETEGGCASISIIAQAECENSQEFSPTLSERSFIAHSKRYSRSDSLDQIPNNVAHATEGRMAPTCWRGRHRGKAKKKRHKKRSKLKMQTVAAGRRGPRTPEQESCTPIPVQEDETHHSALYRNSFWLSELNKSLLYDPPPFEKPEKVLSAGKLHSVGSQHKTDLHKLISPVQCLNHVWKLHYQRDNVPHPETLRPFPYNIVPPPFPHLDNPIHPMKLNALETYFHRDLNYPDSEHRLSGLKLGYSFPKCVSQSVKSSLDKVSVEEYLVDALKGSVSLGEPQNLASLAKTWRGGSLDPKEQFQKADENEGVLLTEKLKPVDYEYREEVHWTKCHGSLGIGSFGEVYKVEDKQTGFQCAAKKVQVEHFRAEELTTCAAITSPKVVPLYGAVKEGPWVTIFMKLMEGGSLGQLIKQSGCLPEDRALSYLGQALEGLEYLHAQNILHGDVKAENVLLSDDGSRALLCDFGHSAHLHPDGLGKCLVTGNYVPGTETHMAPEVVLGKRCDSKVDVWSSCCMMLHMLNGCHPWTQYYNHPLCLKIAKEPPPLREIPPSCNPLTAEIIKMGLEKEPVQRASASELRTKASTALREVGGVTSPWKGEYREPRRLALHKENNPQTSLPPAVSPTSATPDPEPAARGCCASPAPPPALERARQAEGTRWNESRDLSRTWDPPPLSSTPLPLKSCSHTERATTISEQELQQLEIELFLNSLSQPYSLEEQEQMLSCLSIDSPFVSDASEKNSMKASLSLRDTMSSGIHSWNSQTDGQSFSWNNVLSRGRHTDTPSCFNGVKIQIQLLSGENLHIRDFHRTKVGDIATGISSQIPVPAFSLVTKEGHPIHYDMEVPDSGIELQCTLAPDCSVSWAWRVKHGQLENRP
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: complement(join(523233..523397,523713..523813,524334..524478,525155..525261,525501..525845,526427..526577,526929..527092,527716..527820,528191..528322,528939..529068,529515..529652,530082..530690,530817..531027,531876..531945,532409..532661))
location: region:523233-532661:-1
so has part: feature:532409-532661:-1:exon
so has part: feature:531876-531945:-1:exon
so has part: feature:530817-531027:-1:exon
so has part: feature:530082-530690:-1:exon
so has part: feature:529515-529652:-1:exon
so has part: feature:528939-529068:-1:exon
so has part: feature:528191-528322:-1:exon
so has part: feature:527716-527820:-1:exon
so has part: feature:526929-527092:-1:exon
so has part: feature:526427-526577:-1:exon
so has part: feature:525501-525845:-1:exon
so has part: feature:525155-525261:-1:exon
so has part: feature:524334-524478:-1:exon
so has part: feature:523713-523813:-1:exon
so has part: feature:523233-523397:-1:exon

XP_019478928.1
type: Protein
SIO_000068: ncbiprotein

position:523233:-1
position: 523233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532661:-1
position: 532661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532409-532661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531876-531945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530817-531027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530082-530690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529515-529652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528939-529068:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:528191-528322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:527716-527820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:526929-527092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526427-526577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525501-525845:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:525155-525261:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524334-524478:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523713-523813:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:523233-523397:-1:exon

MAP3K14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MAP3K14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 14
translation: MAVMGIACHGAPAPPAKQQQELSATKGLHEAASEKQNSVCKVEDPKKAIFHSQWKILNDVITKGTAKEETEGGCASISIIAQAECENSQEFSPTLSERSFIAHSKRYSRSDSLDQIPNNVAHATEGRMAPTCWRGRHRGKAKKKRHKKRSKLKMQTVAAGRRGPRTPEQESCTPIPVQEDETHHSALYRNSFWLSELNKSLLYDPPPFEKPEKVLSAGKLHSVGSQHKTDLHKLISPVQCLNHVWKLHYQRDNVPHPETLRPFPYNIVPPPFPHLDNPIHPMKLNALETYFHRDLNYPDSEHRLSGLKLGYSFPKCVSQSVKSSLDKVSVEEYLVDALKGSVSLGEPQNLASLAKTWRGGSLDPKEQFQKADENEGVLLTEKLKPVDYEYREEVHWTKCHGSLGIGSFGEVYKVEDKQTGFQCAAKKVQVEHFRAEELTTCAAITSPKVVPLYGAVKEGPWVTIFMKLMEGGSLGQLIKQSGCLPEDRALSYLGQALEGLEYLHAQNILHGDVKAENVLLSDDGSRALLCDFGHSAHLHPDGLGKCLVTGNYVPGTETHMAPEVVLGKRCDSKVDVWSSCCMMLHMLNGCHPWTQYYNHPLCLKIAKEPPPLREIPPSCNPLTAEIIKMGLEKEPVQRASASELRTKASTALREVGGVTSPWKGEYREPRRLALHKENNPQTSLPPAVSPTSATPDPEPAARGCCASPAPPPALERARQAEGTRWNESRDLSRTWDPPPLSSTPLPLKSCSHTERATTISEQELQQLEIELFLNSLSQPYSLEEQEQMLSCLSIDSPFVSDASEKNSMKASLSLRDTMSSGIHSWNSQTDGQSFSWNNVLSRGRHTDTPSCFNGVKIQIQLLSGENLHIRDFHRTKVGDIATGISSQIPVPAFSLVTKEGHPIHYDMEVPDSGIELQCTLAPDCSVSWAWRVKHGQLENRP
SIO_010081: MAP3K14
subclass of: SO_0000673
so part of: MAP3K14
location: complement(join(523233..523397,523713..523813,524334..524478,525155..525261,525501..525845,526427..526577,526929..527092,527716..527820,528191..528322,528939..529068,529515..529652,530082..530690,530817..531027,531876..531945,532409..532661))
location: region:523233-532661:-1
so has part: feature:532409-532661:-1:exon
so has part: feature:531876-531945:-1:exon
so has part: feature:530817-531027:-1:exon
so has part: feature:530082-530690:-1:exon
so has part: feature:529515-529652:-1:exon
so has part: feature:528939-529068:-1:exon
so has part: feature:528191-528322:-1:exon
so has part: feature:527716-527820:-1:exon
so has part: feature:526929-527092:-1:exon
so has part: feature:526427-526577:-1:exon
so has part: feature:525501-525845:-1:exon
so has part: feature:525155-525261:-1:exon
so has part: feature:524334-524478:-1:exon
so has part: feature:523713-523813:-1:exon
so has part: feature:523233-523397:-1:exon

XP_010722763.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:532409-532661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:531876-531945:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:530817-531027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:530082-530690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529515-529652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:528939-529068:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:528191-528322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:527716-527820:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:526929-527092:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526427-526577:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:525501-525845:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:525155-525261:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524334-524478:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523713-523813:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:523233-523397:-1:exon

MYO1D
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MYO1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 558332..595325
location: region:558332-595325:1
so has part: feature:558332-595325:1:exon
subclass of: SO_0000010

100538917
type: Gene
SIO_000068: ncbigene

position:558332:1
position: 558332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595325:1
position: 595325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558332-595325:1:exon

MYO1D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MYO1D
product: myosin ID
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724462.3
SIO_010081: MYO1D
subclass of: SO_0000673
so part of: MYO1D
location: join(558332..558387,558796..559004,559656..559749,560442..560607,560819..560872,561446..561541,562301..562417,562713..562916,563318..563463,563551..563665,563922..564092,566878..566948,567849..567923,568813..568945,573776..573942,576800..577007,583977..584200,585324..585468,585978..586082,590577..590690,594302..595325)
location: region:558332-595325:1
so has part: feature:558332-558387:1:exon
so has part: feature:558796-559004:1:exon
so has part: feature:559656-559749:1:exon
so has part: feature:560442-560607:1:exon
so has part: feature:560819-560872:1:exon
so has part: feature:561446-561541:1:exon
so has part: feature:562301-562417:1:exon
so has part: feature:562713-562916:1:exon
so has part: feature:563318-563463:1:exon
so has part: feature:563551-563665:1:exon
so has part: feature:563922-564092:1:exon
so has part: feature:566878-566948:1:exon
so has part: feature:567849-567923:1:exon
so has part: feature:568813-568945:1:exon
so has part: feature:573776-573942:1:exon
so has part: feature:576800-577007:1:exon
so has part: feature:583977-584200:1:exon
so has part: feature:585324-585468:1:exon
so has part: feature:585978-586082:1:exon
so has part: feature:590577-590690:1:exon
so has part: feature:594302-595325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558332-558387:1:exon

position:558387:1
position: 558387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:558796-559004:1:exon

position:558796:1
position: 558796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559004:1
position: 559004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:559656-559749:1:exon

position:559656:1
position: 559656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559749:1
position: 559749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:560442-560607:1:exon

position:560442:1
position: 560442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560607:1
position: 560607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:560819-560872:1:exon

position:560819:1
position: 560819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560872:1
position: 560872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:561446-561541:1:exon

position:561446:1
position: 561446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561541:1
position: 561541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:562301-562417:1:exon

position:562301:1
position: 562301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562417:1
position: 562417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:562713-562916:1:exon

position:562713:1
position: 562713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562916:1
position: 562916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:563318-563463:1:exon

position:563318:1
position: 563318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563463:1
position: 563463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:563551-563665:1:exon

position:563551:1
position: 563551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563665:1
position: 563665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:563922-564092:1:exon

position:563922:1
position: 563922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564092:1
position: 564092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:566878-566948:1:exon

position:566878:1
position: 566878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566948:1
position: 566948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:567849-567923:1:exon

position:567849:1
position: 567849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567923:1
position: 567923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:568813-568945:1:exon

position:568813:1
position: 568813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568945:1
position: 568945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:573776-573942:1:exon

position:573776:1
position: 573776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573942:1
position: 573942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:576800-577007:1:exon

position:576800:1
position: 576800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577007:1
position: 577007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:583977-584200:1:exon

position:583977:1
position: 583977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584200:1
position: 584200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:585324-585468:1:exon

position:585324:1
position: 585324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:585468:1
position: 585468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:585978-586082:1:exon

position:585978:1
position: 585978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:586082:1
position: 586082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:590577-590690:1:exon

position:590577:1
position: 590577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590690:1
position: 590690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:594302-595325:1:exon

position:594302:1
position: 594302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYO1D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MYO1D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Id
translation: MEHQDPSSPAEVLWCHLMSFEKGRIYTFIGEVVVSMNPYKNLNIYGRDTIEQYKGRELYERPPHLFAIADAAYKAMKRRSKDTCIVISGESGAGKTEASKYIMQYIAAITNPGQRAEVERVKNILLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHINNYLLEKSRVIVQQPGERSFHSFYQLLQGGSDQMLRSLHLQKDASAYSYISPGAQLKCSINDGAEFKAVADAMKVIGFKQEEIQTVYKIVAVILHLGNLKFSVDGDTPLIENSKAVSNIADLLSTKSELVEKALLFRTVATGRDVIDKQHTEQEATYGRDAFAKAIYERLFCWIVTHINDVIEVKNYDTTVHGKNTVIGVLDIYGFEIFDNNSFEQFCINYCNEKLQQLFIQLVLKQEQEEYQREGIPWKHIDYFNNQVIVDLVEQQHKGIIAILDDACMNVGKVTDEMFLEALNSKLGKHAHFSSRKLCATDKTLEFDRDFRIKHYAGDVIYSVSGFIDKNKDTLFQDFKRLMYNSSNPVLKMMWPEGKLSITEVTKRPLTAATLFKNSMIALVDNLASKEPYYVRCIKPNDKKSPQLFDEERCRHQVEYLGLLENVRVRRAGFAYRQTYQKFLHRYKMISEFTWPNHDLPSDKDAVKKLIECHGFQHDVAYGKTKIFIRTPRTLFTLEELHAKMLVRIVLFLQKVWRGTLARLRYKRTRAALTILRHYRRYKVKSYIHEVAQRFRNVRAMKDYGKHVQWPTPPKVLHRFEEALQAIYHRWRAGELIRSIPPKDLPQLRAKVAAMEVLKGLRADLGLQRAWEGDYIALRPDHPQSTGAFLPVATELKRKDKYMNVLFSCHVRKVNRFSKVEDRAIFITDRHLYKMDPMKQYKVMKTIPLYNLVGLSVSNGKDQLVVFHTKDNKDLIVCLFSKEPSNDSRIGELVGVLASHFKRLVLQTHCSQIQNFPRIRVGVTLDFLSVFLHYCWDTRAVIPCVFETTLCLPLLSLYVFIRAWIFGGKCH
SIO_010081: MYO1D
subclass of: SO_0000673
so part of: MYO1D
location: join(558332..558387,558796..559004,559656..559749,560442..560607,560819..560872,561446..561541,562301..562417,562713..562916,563318..563463,563551..563665,563922..564092,566878..566948,567849..567923,568813..568945,573776..573942,576800..577007,583977..584200,585324..585468,585978..586082,590577..590690,594302..594664)
location: region:558332-594664:1
so has part: feature:558332-558387:1:exon
so has part: feature:558796-559004:1:exon
so has part: feature:559656-559749:1:exon
so has part: feature:560442-560607:1:exon
so has part: feature:560819-560872:1:exon
so has part: feature:561446-561541:1:exon
so has part: feature:562301-562417:1:exon
so has part: feature:562713-562916:1:exon
so has part: feature:563318-563463:1:exon
so has part: feature:563551-563665:1:exon
so has part: feature:563922-564092:1:exon
so has part: feature:566878-566948:1:exon
so has part: feature:567849-567923:1:exon
so has part: feature:568813-568945:1:exon
so has part: feature:573776-573942:1:exon
so has part: feature:576800-577007:1:exon
so has part: feature:583977-584200:1:exon
so has part: feature:585324-585468:1:exon
so has part: feature:585978-586082:1:exon
so has part: feature:590577-590690:1:exon
so has part: feature:594302-594664:1:exon

XP_010722764.2
type: Protein
SIO_000068: ncbiprotein

position:594664:1
position: 594664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:558332-558387:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558796-559004:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559656-559749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560442-560607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:560819-560872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:561446-561541:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:562301-562417:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:562713-562916:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:563318-563463:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:563551-563665:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:563922-564092:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:566878-566948:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:567849-567923:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:568813-568945:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:573776-573942:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:576800-577007:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:583977-584200:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:585324-585468:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:585978-586082:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:590577-590690:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:594302-594664:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 605916..606015
location: region:605916-606015:1
so has part: feature:605916-606015:1:region

position:605916:1
position: 605916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606015:1
position: 606015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605916-606015:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 608456..608555
location: region:608456-608555:1
so has part: feature:608456-608555:1:region

position:608456:1
position: 608456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608555:1
position: 608555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608456-608555:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 609037..609136
location: region:609037-609136:1
so has part: feature:609037-609136:1:region

position:609037:1
position: 609037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609136:1
position: 609136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609037-609136:1:region

GPATCH8
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GPATCH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 615838..659562
location: region:615838-659562:1
so has part: feature:615838-659562:1:exon
subclass of: SO_0000010

104914562
type: Gene
SIO_000068: ncbigene

position:615838:1
position: 615838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659562:1
position: 659562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615838-659562:1:exon

GPATCH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GPATCH8
product: G-patch domain containing 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724471.3
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(615838..616976,617721..617795,622713..622785,627775..627842,628347..628433,630033..630176,635846..635976,636599..638227,638784..639782,654183..654188,659295..659562)
location: region:615838-659562:1
so has part: feature:615838-616976:1:exon
so has part: feature:617721-617795:1:exon
so has part: feature:622713-622785:1:exon
so has part: feature:627775-627842:1:exon
so has part: feature:628347-628433:1:exon
so has part: feature:630033-630176:1:exon
so has part: feature:635846-635976:1:exon
so has part: feature:636599-638227:1:exon
so has part: feature:638784-639782:1:exon
so has part: feature:654183-654188:1:exon
so has part: feature:659295-659562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615838-616976:1:exon

position:616976:1
position: 616976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:617721-617795:1:exon

position:617721:1
position: 617721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617795:1
position: 617795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:622713-622785:1:exon

position:622713:1
position: 622713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622785:1
position: 622785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:627775-627842:1:exon

position:627775:1
position: 627775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627842:1
position: 627842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:628347-628433:1:exon

position:628347:1
position: 628347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628433:1
position: 628433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:630033-630176:1:exon

position:630033:1
position: 630033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630176:1
position: 630176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:635846-635976:1:exon

position:635846:1
position: 635846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635976:1
position: 635976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:636599-638227:1:exon

position:636599:1
position: 636599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638227:1
position: 638227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:638784-639782:1:exon

position:638784:1
position: 638784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639782:1
position: 639782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:654183-654188:1:exon

position:654183:1
position: 654183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654188:1
position: 654188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:659295-659562:1:exon

position:659295:1
position: 659295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GPATCH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 8
translation: MLLLGCEGNHFDQYEEGHLEIEQASLDKPIESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMGRMEMELDYAEDATERRRVLEVEKEDTEELRQKYKDYVDKEKAIAKALEDLRANFYCELCDKQYQKHQEFDNHINSYDHAHKQRLKDLKQREFARNVSSRSRKDERKQERALRRLHELAEQRRQPECAPGSGPMFRTTTVAVDEEGGDDDDAAANSSSFTQTSGPGGEMGTERGFLNVGQGGGSAVPGQAPLQAAQAVSFGIKGALGTPLQKIGVSFSFAKKTPVKLETIASVFKDHVDESSSADGAKADEKGSSDGGGLQKAGEGESTNSSDGKAEDDDHDKDSGSLATTLSKLKKMRREDGPTAVEPEYYHYIPPAHCKVKPNFQFLLFMKSTEQTEAENVNKKNTNEARKGNSPKPKPSKHVEKAAESTAQPKEQSEPESTAQQGKEEQKESPEDVSAQESRRLAESSLPEPGVPGDAAQPAPSSKDVPEGPRPPTGPFIPVLSKDESTTLQWPSELLIFTKAEPSVSYSCNPLYFDFKLSRNKDAKGKGAEKSKDPGGLCRENIQNAEFGEVSKAKEADSITEGSGGAEGRSLSQGKQEGGLQGEGEGDESGRSGSGRGKAGKSHKHKKKKKHKKSSRHKRKHKEEPEEKSRKTELGEEKPRKRRRHRRKKVKSSLSTESERALKAELSEECGRFQKKKRCSQESQRKSLSAEEGSSGKKEDSGASRGRSTRSHSQRSLSRKGSRGHESPEERRSGRRDFIRSKIYRSQSPHYFRAARGEGAVKKEDGKGEEPRGSQNSGSGTSRASEGDCSPEERNSVTAKLLLEKVQSRKVEKKPCVAEEMLVGAGKVGIKLKDPPQGYFGPKLPPSLGNKPVLPLIGKLPTVRKPSAKRYEESGMERGEELSDSEGAEDAPLGGQPLLGDAAMGLQDAGLEEQKREEEMPSVPLEAPALPECFSSGDLVLPHTFLAAPGEREALEPMDGGSQPVPVDAAMMPLVPDVEHFPGYVPQGGEPGMEGDRDGGEDSSLAPLESQPITFTPEEMEKYSKLQQAAQQHIQQQLLAKQGPQTSMTINPIMRHSKSTDIFGRLSIKKWLSHYTVFITPFSLSLEGREEVIQLAWNEEKGKMLAKQAAKPSANKGALTTA
SIO_010081: GPATCH8
subclass of: SO_0000673
so part of: GPATCH8
location: join(616956..616976,617721..617795,622713..622785,627775..627842,628347..628433,630033..630176,635846..635976,636599..638227,638784..639782,654183..654188,659295..659547)
location: region:616956-659547:1
so has part: feature:616956-616976:1:exon
so has part: feature:617721-617795:1:exon
so has part: feature:622713-622785:1:exon
so has part: feature:627775-627842:1:exon
so has part: feature:628347-628433:1:exon
so has part: feature:630033-630176:1:exon
so has part: feature:635846-635976:1:exon
so has part: feature:636599-638227:1:exon
so has part: feature:638784-639782:1:exon
so has part: feature:654183-654188:1:exon
so has part: feature:659295-659547:1:exon

XP_010722773.2
type: Protein
SIO_000068: ncbiprotein

position:616956:1
position: 616956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659547:1
position: 659547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616956-616976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617721-617795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622713-622785:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:627775-627842:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:628347-628433:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:630033-630176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:635846-635976:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:636599-638227:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:638784-639782:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:654183-654188:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:659295-659547:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 641146..641245
location: region:641146-641245:1
so has part: feature:641146-641245:1:region

position:641146:1
position: 641146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641245:1
position: 641245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641146-641245:1:region

SLC25A39
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 644991..648959
location: region:644991-648959:1
so has part: feature:644991-648959:1:exon
subclass of: SO_0000010

100544110
type: Gene
SIO_000068: ncbigene

position:644991:1
position: 644991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648959:1
position: 648959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644991-648959:1:exon

SLC25A39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC25A39
product: solute carrier family 25 member 39, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 163 samples with support for all annotated introns
transcript id: XM_019623384.2
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: join(644991..646077,646188..646247,646539..646583,646904..647013,647101..647168,647246..647370,647710..647819,647905..647986,648064..648144,648230..648959)
location: region:644991-648959:1
so has part: feature:644991-646077:1:exon
so has part: feature:646188-646247:1:exon
so has part: feature:646539-646583:1:exon
so has part: feature:646904-647013:1:exon
so has part: feature:647101-647168:1:exon
so has part: feature:647246-647370:1:exon
so has part: feature:647710-647819:1:exon
so has part: feature:647905-647986:1:exon
so has part: feature:648064-648144:1:exon
so has part: feature:648230-648959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644991-646077:1:exon

position:646077:1
position: 646077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:646188-646247:1:exon

position:646188:1
position: 646188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646247:1
position: 646247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:646539-646583:1:exon

position:646539:1
position: 646539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646583:1
position: 646583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:646904-647013:1:exon

position:646904:1
position: 646904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647013:1
position: 647013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:647101-647168:1:exon

position:647101:1
position: 647101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647168:1
position: 647168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:647246-647370:1:exon

position:647246:1
position: 647246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647370:1
position: 647370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:647710-647819:1:exon

position:647710:1
position: 647710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647819:1
position: 647819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:647905-647986:1:exon

position:647905:1
position: 647905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647986:1
position: 647986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:648064-648144:1:exon

position:648064:1
position: 648064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648144:1
position: 648144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:648230-648959:1:exon

position:648230:1
position: 648230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC25A39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC25A39
product: solute carrier family 25 member 39, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010724472.3
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: join(644996..646077,646188..646247,646539..646583,646904..647013,647101..647168,647246..647370,647454..647627,647710..647819,647905..647986,648064..648144,648230..648959)
location: region:644996-648959:1
so has part: feature:644996-646077:1:exon
so has part: feature:646188-646247:1:exon
so has part: feature:646539-646583:1:exon
so has part: feature:646904-647013:1:exon
so has part: feature:647101-647168:1:exon
so has part: feature:647246-647370:1:exon
so has part: feature:647454-647627:1:exon
so has part: feature:647710-647819:1:exon
so has part: feature:647905-647986:1:exon
so has part: feature:648064-648144:1:exon
so has part: feature:648230-648959:1:exon

position:644996:1
position: 644996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644996-646077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646188-646247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646539-646583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:646904-647013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647101-647168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647246-647370:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647454-647627:1:exon

position:647454:1
position: 647454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647627:1
position: 647627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:647710-647819:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:647905-647986:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648064-648144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:648230-648959:1:exon

SLC25A39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC25A39
product: solute carrier family 25 member 39, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003213044.4
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: join(644996..646077,646188..646247,646904..647013,647101..647168,647246..647370,647454..647627,647710..647819,647905..647986,648064..648144,648230..648959)
location: region:644996-648959:1
so has part: feature:644996-646077:1:exon
so has part: feature:646188-646247:1:exon
so has part: feature:646904-647013:1:exon
so has part: feature:647101-647168:1:exon
so has part: feature:647246-647370:1:exon
so has part: feature:647454-647627:1:exon
so has part: feature:647710-647819:1:exon
so has part: feature:647905-647986:1:exon
so has part: feature:648064-648144:1:exon
so has part: feature:648230-648959:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:644996-646077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646188-646247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646904-647013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647101-647168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647246-647370:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647454-647627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647710-647819:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647905-647986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648064-648144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648230-648959:1:exon

SLC25A39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 39 isoform X1
translation: MAEKTSPGPSGAITPLQQMLASGTGAILTSLFVTPLDVVKIRLQAQRTPFSKAWLVRSVPQGSQHATWKCFLYCNGLMDHLYVCQNGNSCTAWYKTPTCFNGTLDAFVKITRHEGIRSLWSGLPPTLVMAVPATVIYFTTYDQLRDYLHARTGSRGHHIPLLAGALARLGAVTLISPLELIRTKMQSRQLSYRELRVCIQSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVREWLCRQTRLDETTFMVSFVSGAISGTVAAVLTLPFDVVKTQRQIQLGDSELHPAAASKPSSTWLLLQRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKTFFQKLNQERRLRGL
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: join(645981..646077,646188..646247,646539..646583,646904..647013,647101..647168,647246..647370,647454..647627,647710..647819,647905..647986,648064..648144,648230..648348)
location: region:645981-648348:1
so has part: feature:645981-646077:1:exon
so has part: feature:646188-646247:1:exon
so has part: feature:646539-646583:1:exon
so has part: feature:646904-647013:1:exon
so has part: feature:647101-647168:1:exon
so has part: feature:647246-647370:1:exon
so has part: feature:647454-647627:1:exon
so has part: feature:647710-647819:1:exon
so has part: feature:647905-647986:1:exon
so has part: feature:648064-648144:1:exon
so has part: feature:648230-648348:1:exon

XP_010722774.1
type: Protein
SIO_000068: ncbiprotein

position:645981:1
position: 645981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:648348:1
position: 648348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:645981-646077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646188-646247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646539-646583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:646904-647013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647101-647168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647246-647370:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647454-647627:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647710-647819:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:647905-647986:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648064-648144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:648230-648348:1:exon

SLC25A39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 39 isoform X3
translation: MAEKTSPGPSGAITPLQQMLASGTGAILTSLFVTPLDVVKIRLQAQRTPFSKAWLVRSVPQGSQHATWKCFLYCNGLMDHLYVCQNGNSCTAWYKTPTCFNGTLDAFVKITRHEGIRSLWSGLPPTLVMAVPATVIYFTTYDQLRDYLHARTGSRGHHIPLLAGALARPLYWFNYELVREWLCRQTRLDETTFMVSFVSGAISGTVAAVLTLPFDVVKTQRQIQLGDSELHPAAASKPSSTWLLLQRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKTFFQKLNQERRLRGL
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: join(645981..646077,646188..646247,646539..646583,646904..647013,647101..647168,647246..647370,647710..647819,647905..647986,648064..648144,648230..648348)
location: region:645981-648348:1
so has part: feature:645981-646077:1:exon
so has part: feature:646188-646247:1:exon
so has part: feature:646539-646583:1:exon
so has part: feature:646904-647013:1:exon
so has part: feature:647101-647168:1:exon
so has part: feature:647246-647370:1:exon
so has part: feature:647710-647819:1:exon
so has part: feature:647905-647986:1:exon
so has part: feature:648064-648144:1:exon
so has part: feature:648230-648348:1:exon

XP_019478929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645981-646077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646188-646247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646539-646583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:646904-647013:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647101-647168:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647246-647370:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647710-647819:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647905-647986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648064-648144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648230-648348:1:exon

SLC25A39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC25A39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 25 member 39 isoform X2
translation: MAEKTSPGPSGAITPLQQMLASGTGAILTSLFVTPLDVVKIRLQAQRTPFSKGKCFLYCNGLMDHLYVCQNGNSCTAWYKTPTCFNGTLDAFVKITRHEGIRSLWSGLPPTLVMAVPATVIYFTTYDQLRDYLHARTGSRGHHIPLLAGALARLGAVTLISPLELIRTKMQSRQLSYRELRVCIQSAVAQDGWLSLWRGWGPTVLRDVPFSALYWFNYELVREWLCRQTRLDETTFMVSFVSGAISGTVAAVLTLPFDVVKTQRQIQLGDSELHPAAASKPSSTWLLLQRIRAESGTRGLFAGFLPRVIKVAPACAIMISTYEFGKTFFQKLNQERRLRGL
SIO_010081: SLC25A39
subclass of: SO_0000673
so part of: SLC25A39
location: join(645981..646077,646188..646247,646904..647013,647101..647168,647246..647370,647454..647627,647710..647819,647905..647986,648064..648144,648230..648348)
location: region:645981-648348:1
so has part: feature:645981-646077:1:exon
so has part: feature:646188-646247:1:exon
so has part: feature:646904-647013:1:exon
so has part: feature:647101-647168:1:exon
so has part: feature:647246-647370:1:exon
so has part: feature:647454-647627:1:exon
so has part: feature:647710-647819:1:exon
so has part: feature:647905-647986:1:exon
so has part: feature:648064-648144:1:exon
so has part: feature:648230-648348:1:exon

XP_003213092.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:645981-646077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:646188-646247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646904-647013:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:647101-647168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647246-647370:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647454-647627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:647710-647819:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:647905-647986:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:648064-648144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:648230-648348:1:exon

LOC100545041
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100545041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<664411..687107)
location: region:664411-687107:-1
so has part: feature:664411-687107:-1:exon
subclass of: SO_0000010

100545041
type: Gene
SIO_000068: ncbigene

position:664411:-1
position: 664411
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:687107:-1
position: 687107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:664411-687107:-1:exon

LOC100545041
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545041
product: microtubule-associated protein tau
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_010724516.2
SIO_010081: LOC100545041
subclass of: SO_0000673
so part of: LOC100545041
location: complement(join(<664411..664571,664721..664802,667999..668091,668240..668332,670909..671174,671575..671625,672069..672201,673223..673393,673926..673981,676296..677153,679262..679327,680477..680548,681539..681625,682888..682967,687005..687107))
location: region:664411-687107:-1
so has part: feature:687005-687107:-1:exon
so has part: feature:682888-682967:-1:exon
so has part: feature:681539-681625:-1:exon
so has part: feature:680477-680548:-1:exon
so has part: feature:679262-679327:-1:exon
so has part: feature:676296-677153:-1:exon
so has part: feature:673926-673981:-1:exon
so has part: feature:673223-673393:-1:exon
so has part: feature:672069-672201:-1:exon
so has part: feature:671575-671625:-1:exon
so has part: feature:670909-671174:-1:exon
so has part: feature:668240-668332:-1:exon
so has part: feature:667999-668091:-1:exon
so has part: feature:664721-664802:-1:exon
so has part: feature:664411-664571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:687005-687107:-1:exon

position:687005:-1
position: 687005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682888-682967:-1:exon

position:682888:-1
position: 682888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682967:-1
position: 682967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:681539-681625:-1:exon

position:681539:-1
position: 681539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681625:-1
position: 681625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:680477-680548:-1:exon

position:680477:-1
position: 680477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680548:-1
position: 680548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:679262-679327:-1:exon

position:679262:-1
position: 679262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679327:-1
position: 679327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:676296-677153:-1:exon

position:676296:-1
position: 676296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677153:-1
position: 677153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:673926-673981:-1:exon

position:673926:-1
position: 673926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673981:-1
position: 673981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:673223-673393:-1:exon

position:673223:-1
position: 673223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673393:-1
position: 673393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:672069-672201:-1:exon

position:672069:-1
position: 672069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672201:-1
position: 672201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:671575-671625:-1:exon

position:671575:-1
position: 671575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671625:-1
position: 671625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:670909-671174:-1:exon

position:670909:-1
position: 670909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671174:-1
position: 671174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:668240-668332:-1:exon

position:668240:-1
position: 668240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668332:-1
position: 668332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:667999-668091:-1:exon

position:667999:-1
position: 667999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668091:-1
position: 668091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:664721-664802:-1:exon

position:664721:-1
position: 664721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664802:-1
position: 664802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:664411-664571:-1:exon

position:664571:-1
position: 664571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100545041
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau
translation: MAEPHQDITVVEDQERQHVPSGYPLQIPVDDGSDEPVSETSDAKSTPTTEDATAPLVEEGDQEDQHGEIPEGTTAEEAGIGATPSLEDHAAGDAAQAPGEPSSPKLQPGLKEQVGGVIKRGSQPMEQLAGVPQEPLLQQETKPAATAPTRIEVTIPIPLDMYQDVRAEDSSELWDRGGREGVGVDPAVGKELGDVCTMGLAGAGGTDASRTADGPTPLDAGAPLKEDTSSWERDEDRDTDGASQQGLLGQRVSPGPKTTKEALKDEGETKSGDVLRDVEREALLVESEARKAEDQEERQQLQGEESYADVTSSEPSETQTEGAGGDAGALMEAAKPPVGLKDGREEGDAAVEEAVLGAGGCGTPKKKPGAADKAVSRVPLLKARIDSKDKEGAETDEKKPKKSSPSTAKPPSDRASIPPHRHTSSSTAPPKSPSSPASTSKRVTPRPASTGTHETKAKGQEMRGGTKPATPRSAAGQAQRNSSNATRIPAKTPTAPKTPPGSGRKEQKKPPPAAAKSEKGEQPKSGDRSGYSSPGSPGTPGSRSRTPSLPTPPAREPKKVAVVRTPPKSPASAKSRVQPSAAPMPDLKNVKSKIGSTENLKHQPGGGKVQIINKKLDFSSVQSKCGSKDNIKHIPGGGSVQIVNQKLDFSSVQSRCGSKDNIKHIPGGGSVQIVYKPVDLSHVTSKCGSLGNIHHKPGGGQVEVKSEKLDFKDKVQSKIGSLDNISHVPGGGNKKVKEGRAAVPRVCEPWG
SIO_010081: LOC100545041
subclass of: SO_0000673
so part of: LOC100545041
location: complement(join(<664411..664571,664721..664802,667999..668091,668240..668332,670909..671174,671575..671625,672069..672201,673223..673393,673926..673981,676296..677153,679262..679327,680477..680548,681539..681625,682888..682951))
location: region:664411-682951:-1
so has part: feature:682888-682951:-1:exon
so has part: feature:681539-681625:-1:exon
so has part: feature:680477-680548:-1:exon
so has part: feature:679262-679327:-1:exon
so has part: feature:676296-677153:-1:exon
so has part: feature:673926-673981:-1:exon
so has part: feature:673223-673393:-1:exon
so has part: feature:672069-672201:-1:exon
so has part: feature:671575-671625:-1:exon
so has part: feature:670909-671174:-1:exon
so has part: feature:668240-668332:-1:exon
so has part: feature:667999-668091:-1:exon
so has part: feature:664721-664802:-1:exon
so has part: feature:664411-664571:-1:exon

XP_010722818.2
type: Protein
SIO_000068: ncbiprotein

position:682951:-1
position: 682951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682888-682951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:681539-681625:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:680477-680548:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:679262-679327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:676296-677153:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:673926-673981:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673223-673393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:672069-672201:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:671575-671625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670909-671174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:668240-668332:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:667999-668091:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:664721-664802:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:664411-664571:-1:exon

LOC116217480
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(690092..>691438)
location: region:690092-691438:-1
so has part: feature:690092-691438:-1:exon
subclass of: SO_0000010

116217480
type: Gene
SIO_000068: ncbigene

position:690092:-1
position: 690092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691438:-1
position: 691438
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:690092-691438:-1:exon

LOC116217480
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC116217480
product: microtubule-associated protein tau-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_031557028.1
SIO_010081: LOC116217480
subclass of: SO_0000673
so part of: LOC116217480
location: complement(join(690092..690911,691235..>691438))
location: region:690092-691438:-1
so has part: feature:691235-691438:-1:exon
so has part: feature:690092-690911:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:691235-691438:-1:exon

position:691235:-1
position: 691235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:690092-690911:-1:exon

position:690911:-1
position: 690911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217480
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC116217480
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein tau-like
translation: FADAFFAPHRLGLGFFTCRERKARKTRAGARLLGPRAQTLLGSRPRCWSHPPPRRGSPQPHIQLGRAPIETHKLTFRENAKAKTDHGAEIVYKSPTISGDASPRRLSNVSSTGSINMVDSPQLATLADEVSASLAKQGL
SIO_010081: LOC116217480
subclass of: SO_0000673
so part of: LOC116217480
location: complement(join(690696..690911,691235..>691438))
location: region:690696-691438:-1
so has part: feature:691235-691438:-1:exon
so has part: feature:690696-690911:-1:exon

XP_031412888.1
type: Protein
SIO_000068: ncbiprotein

position:690696:-1
position: 690696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691235-691438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690696-690911:-1:exon

KANSL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KANSL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 694382..716367
location: region:694382-716367:1
so has part: feature:694382-716367:1:exon
subclass of: SO_0000010

100543955
type: Gene
SIO_000068: ncbigene

position:694382:1
position: 694382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716367:1
position: 716367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694382-716367:1:exon

KANSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KANSL1
product: KAT8 regulatory NSL complex subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031557029.1
SIO_010081: KANSL1
subclass of: SO_0000673
so part of: KANSL1
location: join(694382..694429,697109..697396,700150..700254,704882..704997,706045..706240,707794..707959,710642..710827,711126..711287,711594..711745,713712..713830,714157..714214,714365..714477,715707..715742,716193..716367)
location: region:694382-716367:1
so has part: feature:694382-694429:1:exon
so has part: feature:697109-697396:1:exon
so has part: feature:700150-700254:1:exon
so has part: feature:704882-704997:1:exon
so has part: feature:706045-706240:1:exon
so has part: feature:707794-707959:1:exon
so has part: feature:710642-710827:1:exon
so has part: feature:711126-711287:1:exon
so has part: feature:711594-711745:1:exon
so has part: feature:713712-713830:1:exon
so has part: feature:714157-714214:1:exon
so has part: feature:714365-714477:1:exon
so has part: feature:715707-715742:1:exon
so has part: feature:716193-716367:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:694382-694429:1:exon

position:694429:1
position: 694429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:697109-697396:1:exon

position:697109:1
position: 697109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:697396:1
position: 697396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:700150-700254:1:exon

position:700150:1
position: 700150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:700254:1
position: 700254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:704882-704997:1:exon

position:704882:1
position: 704882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704997:1
position: 704997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:706045-706240:1:exon

position:706045:1
position: 706045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706240:1
position: 706240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:707794-707959:1:exon

position:707794:1
position: 707794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:707959:1
position: 707959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:710642-710827:1:exon

position:710642:1
position: 710642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710827:1
position: 710827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:711126-711287:1:exon

position:711126:1
position: 711126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711287:1
position: 711287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:711594-711745:1:exon

position:711594:1
position: 711594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:711745:1
position: 711745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:713712-713830:1:exon

position:713712:1
position: 713712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:713830:1
position: 713830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:714157-714214:1:exon

position:714157:1
position: 714157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714214:1
position: 714214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:714365-714477:1:exon

position:714365:1
position: 714365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714477:1
position: 714477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:715707-715742:1:exon

position:715707:1
position: 715707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715742:1
position: 715742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:716193-716367:1:exon

position:716193:1
position: 716193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KANSL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KANSL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KAT8 regulatory NSL complex subunit 1
translation: MGRAIEKVGFVSSKLHQWLDGISRAIRRVAFDLPVSSARFSVGCIIKVTLKIIPPPPPSPVCFSRRRRAEWRWAADRAAIVSRWNWLQAHVSDLEYRIRQQTDIYKQIRANKGLIVLGEASPPDPAADDASRPISADVKLEPGAERLSVSGSQPLDSSGLSAASTPESHPTKPCGAPRPVNGVINTLQPGLAEHAQGDGQEAEELLHKKQRMNVVSSASDGTCVAARTRPVLSCKKRRLVRPSSIMPLSKKVHRNSLARCSCDVSPSCALCGARSSAPLDMQYDAPLLERLSQLDSCIHPVLSFPDDVPTSLHFQSMLKSQWQNKPYEKMKAPKKLSLKHRAPMPTSSLTDPARKDRHKLVNSFFTAAKRSQHKTQADKAHRLPLDDFMAVPKAERAPERSLVQPPAHDKKRLRDCSSERSEVLKHHADVGGPSYLAAAATHAPHSPIARQLSASSEGSAPTSTSSQGTSGTAQPRRRRGESSFDINNIVIPMSVAATTRVEKLQYKEILTPSWREVDIGALKASPDEDNEEIEDLSDSAFAARHSKCEEMERARWLWSTSVPPQRRGSRSYRSTDGRTTPHGHIRRGGQLRSMEISHSREQILQQHQRFSRISFCHWAAECVELNTASPSGQDCTLRS
SIO_010081: KANSL1
subclass of: SO_0000673
so part of: KANSL1
location: join(694382..694429,697109..697396,700150..700254,704882..704997,706045..706240,707794..707959,710642..710827,711126..711287,711594..711745,713712..713830,714157..714214,714365..714477,715707..715742,716193..716367)
location: region:694382-716367:1
so has part: feature:694382-694429:1:exon
so has part: feature:697109-697396:1:exon
so has part: feature:700150-700254:1:exon
so has part: feature:704882-704997:1:exon
so has part: feature:706045-706240:1:exon
so has part: feature:707794-707959:1:exon
so has part: feature:710642-710827:1:exon
so has part: feature:711126-711287:1:exon
so has part: feature:711594-711745:1:exon
so has part: feature:713712-713830:1:exon
so has part: feature:714157-714214:1:exon
so has part: feature:714365-714477:1:exon
so has part: feature:715707-715742:1:exon
so has part: feature:716193-716367:1:exon

XP_031412889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:694382-694429:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:697109-697396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:700150-700254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704882-704997:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706045-706240:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707794-707959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:710642-710827:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:711126-711287:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:711594-711745:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:713712-713830:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:714157-714214:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:714365-714477:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:715707-715742:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:716193-716367:1:exon

LOC104914563
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 738216..739921
location: region:738216-739921:1
so has part: feature:738216-739921:1:exon
subclass of: SO_0000010

104914563
type: Gene
SIO_000068: ncbigene

position:738216:1
position: 738216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739921:1
position: 739921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738216-739921:1:exon

LOC104914563
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914563
product: KAT8 regulatory NSL complex subunit 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724473.3
SIO_010081: LOC104914563
subclass of: SO_0000673
so part of: LOC104914563
location: 738216..739921
location: region:738216-739921:1
so has part: feature:738216-739921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:738216-739921:1:exon

LOC104914563
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104914563
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: KAT8 regulatory NSL complex subunit 1-like
translation: MAAMAPALTDAAAEAHHIRFKLAPPSSTLSPGSAESNGNANNILLAANGTKRKAIAPEDPSLDFRNNPTKEELGKLQPLVASYLCSDVTSVSSKEPLKLQGVFNKQTVLKSHSLLSQSFLKTSDLLGRQPVLEFTLENLKTMSTNSQPPLPQAPVNGLAKKLAKSTNSDHENSSALNGGKCASPAAALQGVDYNAGGSELGDLKAGLTNCTLPHRSLDAERTTPFSNNSTANKSSLNSTEQQQVLEGGSGETRLPGVGGHSEFGSGKLEEQKPSLSAGHHSALDSEMRTRALLRRQADIENRARRLQKRLQVVQAKQVERHIQQQLGGFLEKTLSKLPTLDPVRHRSQLMLTRKAEAALRKAASETVTSEGLSSFLKSDSISEELERFTASGMANLRSSEQAFDSDVTDSSSGGESDVEEEELTKADPEQPHVPL
SIO_010081: LOC104914563
subclass of: SO_0000673
so part of: LOC104914563
location: 738299..739606
location: region:738299-739606:1
so has part: feature:738299-739606:1:exon

XP_010722775.1
type: Protein
SIO_000068: ncbiprotein

position:738299:1
position: 738299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:739606:1
position: 739606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738299-739606:1:exon

LOC116217481
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217481
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 762963..769063
location: region:762963-769063:1
so has part: feature:762963-769063:1:exon
subclass of: SO_0000010

116217481
type: Gene
SIO_000068: ncbigene

position:762963:1
position: 762963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:769063:1
position: 769063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762963-769063:1:exon

LOC116217481
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC116217481
product: cell division cycle protein 27 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031557030.1
SIO_010081: LOC116217481
subclass of: SO_0000673
so part of: LOC116217481
location: join(762963..762989,763466..763541,766564..766711,768948..769063)
location: region:762963-769063:1
so has part: feature:762963-762989:1:exon
so has part: feature:763466-763541:1:exon
so has part: feature:766564-766711:1:exon
so has part: feature:768948-769063:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762963-762989:1:exon

position:762989:1
position: 762989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:763466-763541:1:exon

position:763466:1
position: 763466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763541:1
position: 763541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:766564-766711:1:exon

position:766564:1
position: 766564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766711:1
position: 766711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:768948-769063:1:exon

position:768948:1
position: 768948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217481
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC116217481
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 27 homolog
translation: MVFSLSHLKAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLKGHSCTTPQCKYLLAKCCVDLSNRVKTLDCQCCEPCNPFKPLVF
SIO_010081: LOC116217481
subclass of: SO_0000673
so part of: LOC116217481
location: join(762963..762989,763466..763541,766564..766711,768948..769014)
location: region:762963-769014:1
so has part: feature:762963-762989:1:exon
so has part: feature:763466-763541:1:exon
so has part: feature:766564-766711:1:exon
so has part: feature:768948-769014:1:exon

XP_031412890.1
type: Protein
SIO_000068: ncbiprotein

position:769014:1
position: 769014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762963-762989:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:763466-763541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:766564-766711:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:768948-769014:1:exon

CDC27
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CDC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 770481..783717
location: region:770481-783717:1
so has part: feature:770481-783717:1:exon
subclass of: SO_0000010

100543802
type: Gene
SIO_000068: ncbigene

position:770481:1
position: 770481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:783717:1
position: 783717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770481-783717:1:exon

CDC27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CDC27
product: cell division cycle 27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 158 samples with support for all annotated introns
transcript id: XM_031557046.1
SIO_010081: CDC27
subclass of: SO_0000673
so part of: CDC27
location: join(770481..770631,770744..770958,771589..771703,773717..773850,774265..774364,774989..775196,776302..776471,777134..777286,778093..778301,778529..778646,779022..779150,779997..780071,780961..781141,782308..783717)
location: region:770481-783717:1
so has part: feature:770481-770631:1:exon
so has part: feature:770744-770958:1:exon
so has part: feature:771589-771703:1:exon
so has part: feature:773717-773850:1:exon
so has part: feature:774265-774364:1:exon
so has part: feature:774989-775196:1:exon
so has part: feature:776302-776471:1:exon
so has part: feature:777134-777286:1:exon
so has part: feature:778093-778301:1:exon
so has part: feature:778529-778646:1:exon
so has part: feature:779022-779150:1:exon
so has part: feature:779997-780071:1:exon
so has part: feature:780961-781141:1:exon
so has part: feature:782308-783717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:770481-770631:1:exon

position:770631:1
position: 770631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770744-770958:1:exon

position:770744:1
position: 770744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:770958:1
position: 770958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:771589-771703:1:exon

position:771589:1
position: 771589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771703:1
position: 771703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:773717-773850:1:exon

position:773717:1
position: 773717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:773850:1
position: 773850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:774265-774364:1:exon

position:774265:1
position: 774265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:774364:1
position: 774364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:774989-775196:1:exon

position:774989:1
position: 774989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775196:1
position: 775196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:776302-776471:1:exon

position:776302:1
position: 776302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:776471:1
position: 776471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:777134-777286:1:exon

position:777134:1
position: 777134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777286:1
position: 777286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:778093-778301:1:exon

position:778093:1
position: 778093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778301:1
position: 778301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:778529-778646:1:exon

position:778529:1
position: 778529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778646:1
position: 778646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:779022-779150:1:exon

position:779022:1
position: 779022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779150:1
position: 779150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:779997-780071:1:exon

position:779997:1
position: 779997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780071:1
position: 780071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:780961-781141:1:exon

position:780961:1
position: 780961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:781141:1
position: 781141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:782308-783717:1:exon

position:782308:1
position: 782308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CDC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle protein 27 homolog
translation: METPQDTIELNRINLESSNAKYSSLNTDSSMSYIDSAVISPDAVPLGSGTAILSKQAQNKPKTGRSLLGGPAALSPLTPSFGILPLETPSPGDGSYLQNYTNSSSVIDVPSTGAPSKKKLRVMQAVTRISQAGTKSVFSQSGNSREVTPILVAQTQSSGPQTSTTPQVLSPTIAAPPNSLPRRSSRLFTSDSSTTKENSKKLKMKFPPKIANRKTKSKTNKGGITQPNINDSLEITKLDSSIISEGKISTVTPQIQAFTLQKAAAGLMSLLRDMGKGYLALCSYNCKEAINILSHLPSHHYNTGWVLCQIGRAYFELAEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAINIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPKGANNQIKEAIDKRYLPDDEEPITQEEQISECYPYESVGTDESQESSMTDADDTQLHAVESDEF
SIO_010081: CDC27
subclass of: SO_0000673
so part of: CDC27
location: join(770608..770631,770744..770958,771589..771703,773717..773850,774265..774364,774989..775196,776302..776471,777134..777286,778093..778301,778529..778646,779022..779150,779997..780071,780961..781141,782308..782390)
location: region:770608-782390:1
so has part: feature:770608-770631:1:exon
so has part: feature:770744-770958:1:exon
so has part: feature:771589-771703:1:exon
so has part: feature:773717-773850:1:exon
so has part: feature:774265-774364:1:exon
so has part: feature:774989-775196:1:exon
so has part: feature:776302-776471:1:exon
so has part: feature:777134-777286:1:exon
so has part: feature:778093-778301:1:exon
so has part: feature:778529-778646:1:exon
so has part: feature:779022-779150:1:exon
so has part: feature:779997-780071:1:exon
so has part: feature:780961-781141:1:exon
so has part: feature:782308-782390:1:exon

XP_031412906.1
type: Protein
SIO_000068: ncbiprotein

position:770608:1
position: 770608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:782390:1
position: 782390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770608-770631:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770744-770958:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:771589-771703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773717-773850:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:774265-774364:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774989-775196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:776302-776471:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:777134-777286:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:778093-778301:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:778529-778646:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:779022-779150:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:779997-780071:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:780961-781141:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:782308-782390:1:exon

DDX42
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DDX42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 788443..803372
location: region:788443-803372:1
so has part: feature:788443-803372:1:exon
subclass of: SO_0000010

100543184
type: Gene
SIO_000068: ncbigene

position:788443:1
position: 788443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803372:1
position: 803372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788443-803372:1:exon

DDX42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DDX42
product: DEAD-box helicase 42, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_003213038.4
SIO_010081: DDX42
subclass of: SO_0000673
so part of: DDX42
location: join(788443..788696,789001..789151,789753..789814,790562..790598,792040..792189,792466..792570,793158..793277,793781..793957,794443..794571,795106..795205,795866..795913,796461..796558,797793..798069,798735..798961,800158..800268,800810..800911,801784..803372)
location: region:788443-803372:1
so has part: feature:788443-788696:1:exon
so has part: feature:789001-789151:1:exon
so has part: feature:789753-789814:1:exon
so has part: feature:790562-790598:1:exon
so has part: feature:792040-792189:1:exon
so has part: feature:792466-792570:1:exon
so has part: feature:793158-793277:1:exon
so has part: feature:793781-793957:1:exon
so has part: feature:794443-794571:1:exon
so has part: feature:795106-795205:1:exon
so has part: feature:795866-795913:1:exon
so has part: feature:796461-796558:1:exon
so has part: feature:797793-798069:1:exon
so has part: feature:798735-798961:1:exon
so has part: feature:800158-800268:1:exon
so has part: feature:800810-800911:1:exon
so has part: feature:801784-803372:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788443-788696:1:exon

position:788696:1
position: 788696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:789001-789151:1:exon

position:789001:1
position: 789001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789151:1
position: 789151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:789753-789814:1:exon

position:789753:1
position: 789753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789814:1
position: 789814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:790562-790598:1:exon

position:790562:1
position: 790562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790598:1
position: 790598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:792040-792189:1:exon

position:792040:1
position: 792040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792189:1
position: 792189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:792466-792570:1:exon

position:792466:1
position: 792466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:792570:1
position: 792570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:793158-793277:1:exon

position:793158:1
position: 793158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793277:1
position: 793277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:793781-793957:1:exon

position:793781:1
position: 793781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793957:1
position: 793957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:794443-794571:1:exon

position:794443:1
position: 794443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:794571:1
position: 794571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:795106-795205:1:exon

position:795106:1
position: 795106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795205:1
position: 795205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:795866-795913:1:exon

position:795866:1
position: 795866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795913:1
position: 795913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:796461-796558:1:exon

position:796461:1
position: 796461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796558:1
position: 796558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:797793-798069:1:exon

position:797793:1
position: 797793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798069:1
position: 798069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:798735-798961:1:exon

position:798735:1
position: 798735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798961:1
position: 798961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:800158-800268:1:exon

position:800158:1
position: 800158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800268:1
position: 800268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:800810-800911:1:exon

position:800810:1
position: 800810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:800911:1
position: 800911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:801784-803372:1:exon

position:801784:1
position: 801784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DDX42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DDX42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX42 isoform X1
translation: MNWNKGGPGTKRGFGFGGFAITPGKKEEPKLSQQSHSAFGTAGSSAAFAKSGPPQLPSFYKIGSKRANFDEENAYFEDEEEDNSNVDLPYIPAENSPTRQQFNSKSADSDSDDDPLEAFMAEVEDQAARDMKRLEDKDKEKKNAKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSESSDRGNNNSVMSNYEAYKPSSGAMGDRLTAMKAAFQSQYKSHFVAASLNNQKTGSSAAGASGWTSAGSLNSVPTSSAQQNAANPDSPIAATAAAKGVPGFTSTGTLSSVPTFPSVGMQGYNNTNSANASAANREGIGSAGGAPRGGSGGGGGGGIVRERYSDNRNSRHNEVPRRGEGGGRYNDLQHHGEGGGRYSDAYRHGEGRHGDSHRHAESRHFADVGGANRNNVDGRNISEGRSNESRNGENRKDAGSRDNKTDGFAVPEPPKRKKSRWDS
SIO_010081: DDX42
subclass of: SO_0000673
so part of: DDX42
location: join(788476..788696,789001..789151,789753..789814,790562..790598,792040..792189,792466..792570,793158..793277,793781..793957,794443..794571,795106..795205,795866..795913,796461..796558,797793..798069,798735..798961,800158..800268,800810..800911,801784..802503)
location: region:788476-802503:1
so has part: feature:788476-788696:1:exon
so has part: feature:789001-789151:1:exon
so has part: feature:789753-789814:1:exon
so has part: feature:790562-790598:1:exon
so has part: feature:792040-792189:1:exon
so has part: feature:792466-792570:1:exon
so has part: feature:793158-793277:1:exon
so has part: feature:793781-793957:1:exon
so has part: feature:794443-794571:1:exon
so has part: feature:795106-795205:1:exon
so has part: feature:795866-795913:1:exon
so has part: feature:796461-796558:1:exon
so has part: feature:797793-798069:1:exon
so has part: feature:798735-798961:1:exon
so has part: feature:800158-800268:1:exon
so has part: feature:800810-800911:1:exon
so has part: feature:801784-802503:1:exon

XP_003213086.1
type: Protein
SIO_000068: ncbiprotein

position:788476:1
position: 788476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802503:1
position: 802503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788476-788696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:789001-789151:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:789753-789814:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:790562-790598:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:792040-792189:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:792466-792570:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:793158-793277:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:793781-793957:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:794443-794571:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:795106-795205:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:795866-795913:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:796461-796558:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:797793-798069:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:798735-798961:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:800158-800268:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:800810-800911:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:801784-802503:1:exon

DDX42
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DDX42
product: DEAD-box helicase 42, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_019623385.2
SIO_010081: DDX42
subclass of: SO_0000673
so part of: DDX42
location: join(789769..789814,792040..792189,792466..792570,793158..793277,793781..793957,794443..794571,795106..795205,795866..795913,796461..796558,797793..798069,798735..798961,800158..800268,800810..800911,801784..803372)
location: region:789769-803372:1
so has part: feature:789769-789814:1:exon
so has part: feature:792040-792189:1:exon
so has part: feature:792466-792570:1:exon
so has part: feature:793158-793277:1:exon
so has part: feature:793781-793957:1:exon
so has part: feature:794443-794571:1:exon
so has part: feature:795106-795205:1:exon
so has part: feature:795866-795913:1:exon
so has part: feature:796461-796558:1:exon
so has part: feature:797793-798069:1:exon
so has part: feature:798735-798961:1:exon
so has part: feature:800158-800268:1:exon
so has part: feature:800810-800911:1:exon
so has part: feature:801784-803372:1:exon

position:789769:1
position: 789769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789769-789814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792040-792189:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:792466-792570:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793158-793277:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793781-793957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:794443-794571:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:795106-795205:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:795866-795913:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796461-796558:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:797793-798069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:798735-798961:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:800158-800268:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:800810-800911:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:801784-803372:1:exon

DDX42
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DDX42
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX42 isoform X2
translation: MAENPTAGVVQEEEEDNLEYDSDGNPIAPSKKIIDPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIFPSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGYRERPGLGSESSDRGNNNSVMSNYEAYKPSSGAMGDRLTAMKAAFQSQYKSHFVAASLNNQKTGSSAAGASGWTSAGSLNSVPTSSAQQNAANPDSPIAATAAAKGVPGFTSTGTLSSVPTFPSVGMQGYNNTNSANASAANREGIGSAGGAPRGGSGGGGGGGIVRERYSDNRNSRHNEVPRRGEGGGRYNDLQHHGEGGGRYSDAYRHGEGRHGDSHRHAESRHFADVGGANRNNVDGRNISEGRSNESRNGENRKDAGSRDNKTDGFAVPEPPKRKKSRWDS
SIO_010081: DDX42
subclass of: SO_0000673
so part of: DDX42
location: join(792058..792189,792466..792570,793158..793277,793781..793957,794443..794571,795106..795205,795866..795913,796461..796558,797793..798069,798735..798961,800158..800268,800810..800911,801784..802503)
location: region:792058-802503:1
so has part: feature:792058-792189:1:exon
so has part: feature:792466-792570:1:exon
so has part: feature:793158-793277:1:exon
so has part: feature:793781-793957:1:exon
so has part: feature:794443-794571:1:exon
so has part: feature:795106-795205:1:exon
so has part: feature:795866-795913:1:exon
so has part: feature:796461-796558:1:exon
so has part: feature:797793-798069:1:exon
so has part: feature:798735-798961:1:exon
so has part: feature:800158-800268:1:exon
so has part: feature:800810-800911:1:exon
so has part: feature:801784-802503:1:exon

XP_019478930.1
type: Protein
SIO_000068: ncbiprotein

position:792058:1
position: 792058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:792058-792189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:792466-792570:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793158-793277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793781-793957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:794443-794571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:795106-795205:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:795866-795913:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:796461-796558:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:797793-798069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:798735-798961:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:800158-800268:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:800810-800911:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:801784-802503:1:exon

LOC100543646
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100543646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(804767..810859)
location: region:804767-810859:-1
so has part: feature:804767-810859:-1:exon
subclass of: SO_0000010

100543646
type: Gene
SIO_000068: ncbigene

position:804767:-1
position: 804767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810859:-1
position: 810859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804767-810859:-1:exon

LOC100543646
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543646
product: parathyroid hormone/parathyroid hormone-related peptide receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010724475.3
SIO_010081: LOC100543646
subclass of: SO_0000673
so part of: LOC100543646
location: complement(join(804767..806148,806274..806315,806395..806532,806673..806771,806895..806961,807369..807429,807586..807739,807958..808141,808451..808545,808701..808825,808926..809036,809480..809585,810045..810859))
location: region:804767-810859:-1
so has part: feature:810045-810859:-1:exon
so has part: feature:809480-809585:-1:exon
so has part: feature:808926-809036:-1:exon
so has part: feature:808701-808825:-1:exon
so has part: feature:808451-808545:-1:exon
so has part: feature:807958-808141:-1:exon
so has part: feature:807586-807739:-1:exon
so has part: feature:807369-807429:-1:exon
so has part: feature:806895-806961:-1:exon
so has part: feature:806673-806771:-1:exon
so has part: feature:806395-806532:-1:exon
so has part: feature:806274-806315:-1:exon
so has part: feature:804767-806148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:810045-810859:-1:exon

position:810045:-1
position: 810045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:809480-809585:-1:exon

position:809480:-1
position: 809480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809585:-1
position: 809585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:808926-809036:-1:exon

position:808926:-1
position: 808926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809036:-1
position: 809036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:808701-808825:-1:exon

position:808701:-1
position: 808701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808825:-1
position: 808825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:808451-808545:-1:exon

position:808451:-1
position: 808451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808545:-1
position: 808545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:807958-808141:-1:exon

position:807958:-1
position: 807958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:808141:-1
position: 808141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:807586-807739:-1:exon

position:807586:-1
position: 807586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807739:-1
position: 807739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:807369-807429:-1:exon

position:807369:-1
position: 807369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807429:-1
position: 807429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:806895-806961:-1:exon

position:806895:-1
position: 806895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806961:-1
position: 806961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:806673-806771:-1:exon

position:806673:-1
position: 806673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806771:-1
position: 806771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:806395-806532:-1:exon

position:806395:-1
position: 806395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806532:-1
position: 806532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:806274-806315:-1:exon

position:806274:-1
position: 806274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806315:-1
position: 806315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:804767-806148:-1:exon

position:806148:-1
position: 806148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100543646
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543646
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: parathyroid hormone/parathyroid hormone-related peptide receptor-like
translation: MLHLIPHLSSPHSLQHWAGGDTAPIPRWLRPMGSVGRGGIVAALLCCCLLGSARALVDPDDVLTKEEQIYLLVEAREKCQRDIRAQLEKVKDTNCLPEWDGIICWPKGSPSQEVAVPCPDYIYDFNHKGRAYRYCSAYGTWEVTLSLNKTWANYTECAVLFSSESRSREKEVFDRLHLMYTTGYSISLASLIVAVCILSYFKRLHCTRNYIHMHLFTSFICRAASIFLKDAVLYSGVLGSEAKLREEDLGAELSPSPGQRSHLVGCKVVVTLFLYFLATNHYWILVEGLYLHSLIFMAFLSNKNYLWVLIIIGWGLPAVFVSIWASVRASLADTQCWDLSAGNMKWIYQVPILAAVVVNFFLFLNIVRVLASKLWETNTGKLDPRQQYRQLLKSTLVLMPLFGVHYVVFMAMPYTEVSGVLWQIQMHYEMLFNSSQGFFVAFIYCFCNGEVQAEIKKAHFRRSLALDFKQKARASSAAGSCCYGGLMSHGTTSFSVSLTGRGPGGTQPRGLLPPARGSLPGYTPSSCAAELLSHLTQEMSQKTCGENTLGLKDLDESHPSLNKELETML
SIO_010081: LOC100543646
subclass of: SO_0000673
so part of: LOC100543646
location: complement(join(805789..806148,806274..806315,806395..806532,806673..806771,806895..806961,807369..807429,807586..807739,807958..808141,808451..808545,808701..808825,808926..809036,809480..809585,810045..810212))
location: region:805789-810212:-1
so has part: feature:810045-810212:-1:exon
so has part: feature:809480-809585:-1:exon
so has part: feature:808926-809036:-1:exon
so has part: feature:808701-808825:-1:exon
so has part: feature:808451-808545:-1:exon
so has part: feature:807958-808141:-1:exon
so has part: feature:807586-807739:-1:exon
so has part: feature:807369-807429:-1:exon
so has part: feature:806895-806961:-1:exon
so has part: feature:806673-806771:-1:exon
so has part: feature:806395-806532:-1:exon
so has part: feature:806274-806315:-1:exon
so has part: feature:805789-806148:-1:exon

XP_010722777.1
type: Protein
SIO_000068: ncbiprotein

position:805789:-1
position: 805789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810212:-1
position: 810212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:810045-810212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809480-809585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:808926-809036:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808701-808825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:808451-808545:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807958-808141:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:807586-807739:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:807369-807429:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:806895-806961:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:806673-806771:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:806395-806532:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:806274-806315:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:805789-806148:-1:exon

MYL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MYL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 812918..817966
location: region:812918-817966:1
so has part: feature:812918-817966:1:exon
subclass of: SO_0000010

100543339
type: Gene
SIO_000068: ncbigene

position:812918:1
position: 812918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817966:1
position: 817966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812918-817966:1:exon

MYL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MYL4
product: myosin light chain 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 175 samples with support for all annotated introns
transcript id: XM_003213039.4
SIO_010081: MYL4
subclass of: SO_0000673
so part of: MYL4
location: join(812918..813082,813678..813705,815252..815401,815854..816027,816435..816512,817093..817136,817727..817966)
location: region:812918-817966:1
so has part: feature:812918-813082:1:exon
so has part: feature:813678-813705:1:exon
so has part: feature:815252-815401:1:exon
so has part: feature:815854-816027:1:exon
so has part: feature:816435-816512:1:exon
so has part: feature:817093-817136:1:exon
so has part: feature:817727-817966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:812918-813082:1:exon

position:813082:1
position: 813082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:813678-813705:1:exon

position:813678:1
position: 813678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813705:1
position: 813705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:815252-815401:1:exon

position:815252:1
position: 815252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815401:1
position: 815401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:815854-816027:1:exon

position:815854:1
position: 815854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816027:1
position: 816027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:816435-816512:1:exon

position:816435:1
position: 816435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816512:1
position: 816512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:817093-817136:1:exon

position:817093:1
position: 817093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817136:1
position: 817136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:817727-817966:1:exon

position:817727:1
position: 817727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MYL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain 4 isoform X2
translation: MPLKKSDPKKDAAKAAAAPEAPKEFTFDPKSVKIEFAAEQIEEFKEAFSLFDRTPTGAMQISYAQCGDVLRALGHNPTNAEVLKVLGKPKPEDMNTKMLDFETFLPILQHFTRTREQGTFEDFVEGLRVFDKEGNGLVMGAELRHVLVTLGEKMTESEVEQLMAGQEDANGCINYEAFVKHIMSG
SIO_010081: MYL4
subclass of: SO_0000673
so part of: MYL4
location: join(812984..813082,813678..813705,815252..815401,815854..816027,816435..816512,817093..817121)
location: region:812984-817121:1
so has part: feature:812984-813082:1:exon
so has part: feature:813678-813705:1:exon
so has part: feature:815252-815401:1:exon
so has part: feature:815854-816027:1:exon
so has part: feature:816435-816512:1:exon
so has part: feature:817093-817121:1:exon

XP_003213087.1
type: Protein
SIO_000068: ncbiprotein

position:812984:1
position: 812984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817121:1
position: 817121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812984-813082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:813678-813705:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815252-815401:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:815854-816027:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:816435-816512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:817093-817121:1:exon

MYL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MYL4
product: myosin light chain 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019623386.2
SIO_010081: MYL4
subclass of: SO_0000673
so part of: MYL4
location: join(814004..814579,815252..815401,815854..816027,816435..816512,817093..817136,817727..817966)
location: region:814004-817966:1
so has part: feature:814004-814579:1:exon
so has part: feature:815252-815401:1:exon
so has part: feature:815854-816027:1:exon
so has part: feature:816435-816512:1:exon
so has part: feature:817093-817136:1:exon
so has part: feature:817727-817966:1:exon

position:814004:1
position: 814004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814004-814579:1:exon

position:814579:1
position: 814579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:815252-815401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815854-816027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:816435-816512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:817093-817136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:817727-817966:1:exon

MYL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MYL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin light chain 4 isoform X1
translation: MPNRKPKAPDRNSQPTEQNIHQPIVPPSPHEDNDRPIPPSSCSAISELLLSIAKEMDQNLELINAMAIKLSVLSVHTDRLEGLITHLAHLAARRQQDEIQERAEHPLQEKQRLPAHVGLLGKWAPGTKFGARGFTQEQKEWGDLEELSSSRFVPQQQRGTRDEALSSAEFKEAFSLFDRTPTGAMQISYAQCGDVLRALGHNPTNAEVLKVLGKPKPEDMNTKMLDFETFLPILQHFTRTREQGTFEDFVEGLRVFDKEGNGLVMGAELRHVLVTLGEKMTESEVEQLMAGQEDANGCINYEAFVKHIMSG
SIO_010081: MYL4
subclass of: SO_0000673
so part of: MYL4
location: join(814075..814579,815252..815401,815854..816027,816435..816512,817093..817121)
location: region:814075-817121:1
so has part: feature:814075-814579:1:exon
so has part: feature:815252-815401:1:exon
so has part: feature:815854-816027:1:exon
so has part: feature:816435-816512:1:exon
so has part: feature:817093-817121:1:exon

XP_019478931.1
type: Protein
SIO_000068: ncbiprotein

position:814075:1
position: 814075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814075-814579:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815252-815401:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:815854-816027:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:816435-816512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:817093-817121:1:exon

RNF113A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RNF113A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 821174..826534
location: region:821174-826534:1
so has part: feature:821174-826534:1:exon
subclass of: SO_0000010

100543495
type: Gene
SIO_000068: ncbigene

position:821174:1
position: 821174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826534:1
position: 826534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821174-826534:1:exon

RNF113A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF113A
product: ring finger protein 113A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003213040.3
SIO_010081: RNF113A
subclass of: SO_0000673
so part of: RNF113A
location: join(821174..821309,821404..821508,822981..823088,823363..823472,823677..823783,824211..824300,825147..825240,825832..825938,826395..826534)
location: region:821174-826534:1
so has part: feature:821174-821309:1:exon
so has part: feature:821404-821508:1:exon
so has part: feature:822981-823088:1:exon
so has part: feature:823363-823472:1:exon
so has part: feature:823677-823783:1:exon
so has part: feature:824211-824300:1:exon
so has part: feature:825147-825240:1:exon
so has part: feature:825832-825938:1:exon
so has part: feature:826395-826534:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:821174-821309:1:exon

position:821309:1
position: 821309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821404-821508:1:exon

position:821404:1
position: 821404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:821508:1
position: 821508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:822981-823088:1:exon

position:822981:1
position: 822981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823088:1
position: 823088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:823363-823472:1:exon

position:823363:1
position: 823363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823472:1
position: 823472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:823677-823783:1:exon

position:823677:1
position: 823677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823783:1
position: 823783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:824211-824300:1:exon

position:824211:1
position: 824211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824300:1
position: 824300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:825147-825240:1:exon

position:825147:1
position: 825147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825240:1
position: 825240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:825832-825938:1:exon

position:825832:1
position: 825832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825938:1
position: 825938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:826395-826534:1:exon

position:826395:1
position: 826395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF113A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF113A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF113A
translation: MIQKTRRCTKERPSYALSSSDEDDPSKEIGVTYKSTRSAKPVGPEDMGATAVYELDTEKDKDAQAIFERSQKIQEELRGKEDDKIYRGINNYQKYVKPKDTSMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICKDYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGVNDEENYEVSSDEEDMPFKCFICRSSFKNPVVTKCRHYFCESCALQHYRKSQRCYVCDKQTNGVFNPAKELMAKLEKHKGEEEEEEESDHSDHGEDPH
SIO_010081: RNF113A
subclass of: SO_0000673
so part of: RNF113A
location: join(821298..821309,821404..821508,822981..823088,823363..823472,823677..823783,824211..824300,825147..825240,825832..825938,826395..826483)
location: region:821298-826483:1
so has part: feature:821298-821309:1:exon
so has part: feature:821404-821508:1:exon
so has part: feature:822981-823088:1:exon
so has part: feature:823363-823472:1:exon
so has part: feature:823677-823783:1:exon
so has part: feature:824211-824300:1:exon
so has part: feature:825147-825240:1:exon
so has part: feature:825832-825938:1:exon
so has part: feature:826395-826483:1:exon

XP_003213088.2
type: Protein
SIO_000068: ncbiprotein

position:821298:1
position: 821298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826483:1
position: 826483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821298-821309:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:821404-821508:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822981-823088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:823363-823472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:823677-823783:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:824211-824300:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:825147-825240:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825832-825938:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:826395-826483:1:exon

STRADA
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: STRADA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(827411..838363)
location: region:827411-838363:-1
so has part: feature:827411-838363:-1:exon
subclass of: SO_0000010

100542875
type: Gene
SIO_000068: ncbigene

position:827411:-1
position: 827411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838363:-1
position: 838363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827411-838363:-1:exon

STRADA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STRADA
product: STE20 related adaptor alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_010724477.3
SIO_010081: STRADA
subclass of: SO_0000673
so part of: STRADA
location: complement(join(827411..828834,829254..829296,829759..830000,830254..830358,830659..830830,831416..831539,831667..831775,831900..832021,832643..832745,836172..836200,836981..837038,838106..838190,838261..838363))
location: region:827411-838363:-1
so has part: feature:838261-838363:-1:exon
so has part: feature:838106-838190:-1:exon
so has part: feature:836981-837038:-1:exon
so has part: feature:836172-836200:-1:exon
so has part: feature:832643-832745:-1:exon
so has part: feature:831900-832021:-1:exon
so has part: feature:831667-831775:-1:exon
so has part: feature:831416-831539:-1:exon
so has part: feature:830659-830830:-1:exon
so has part: feature:830254-830358:-1:exon
so has part: feature:829759-830000:-1:exon
so has part: feature:829254-829296:-1:exon
so has part: feature:827411-828834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:838261-838363:-1:exon

position:838261:-1
position: 838261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:838106-838190:-1:exon

position:838106:-1
position: 838106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838190:-1
position: 838190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:836981-837038:-1:exon

position:836981:-1
position: 836981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837038:-1
position: 837038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:836172-836200:-1:exon

position:836172:-1
position: 836172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836200:-1
position: 836200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:832643-832745:-1:exon

position:832643:-1
position: 832643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832745:-1
position: 832745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:831900-832021:-1:exon

position:831900:-1
position: 831900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832021:-1
position: 832021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:831667-831775:-1:exon

position:831667:-1
position: 831667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831775:-1
position: 831775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:831416-831539:-1:exon

position:831416:-1
position: 831416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831539:-1
position: 831539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:830659-830830:-1:exon

position:830659:-1
position: 830659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830830:-1
position: 830830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:830254-830358:-1:exon

position:830254:-1
position: 830254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830358:-1
position: 830358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:829759-830000:-1:exon

position:829759:-1
position: 829759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830000:-1
position: 830000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:829254-829296:-1:exon

position:829254:-1
position: 829254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829296:-1
position: 829296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:827411-828834:-1:exon

position:828834:-1
position: 828834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STRADA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STRADA
product: STE20 related adaptor alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_010724478.3
SIO_010081: STRADA
subclass of: SO_0000673
so part of: STRADA
location: complement(join(827411..828834,829254..829296,829759..830000,830254..830358,830659..830830,831416..831539,831667..831775,831900..832021,832643..832745,836172..836200,836981..837038,838130..838190,838261..838362))
location: region:827411-838362:-1
so has part: feature:838261-838362:-1:exon
so has part: feature:838130-838190:-1:exon
so has part: feature:836981-837038:-1:exon
so has part: feature:836172-836200:-1:exon
so has part: feature:832643-832745:-1:exon
so has part: feature:831900-832021:-1:exon
so has part: feature:831667-831775:-1:exon
so has part: feature:831416-831539:-1:exon
so has part: feature:830659-830830:-1:exon
so has part: feature:830254-830358:-1:exon
so has part: feature:829759-830000:-1:exon
so has part: feature:829254-829296:-1:exon
so has part: feature:827411-828834:-1:exon

position:838362:-1
position: 838362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838261-838362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:838130-838190:-1:exon

position:838130:-1
position: 838130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:836981-837038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836172-836200:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:832643-832745:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831900-832021:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831667-831775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:831416-831539:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830659-830830:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:830254-830358:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829759-830000:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:829254-829296:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:827411-828834:-1:exon

STRADA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STRADA
product: STE20 related adaptor alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 214 samples with support for all annotated introns
transcript id: XM_010724479.3
SIO_010081: STRADA
subclass of: SO_0000673
so part of: STRADA
location: complement(join(827411..828834,829254..829296,829759..830000,830254..830358,830659..830830,831416..831539,831667..831775,831900..832021,832643..832745,836981..837038,838130..838196))
location: region:827411-838196:-1
so has part: feature:838130-838196:-1:exon
so has part: feature:836981-837038:-1:exon
so has part: feature:832643-832745:-1:exon
so has part: feature:831900-832021:-1:exon
so has part: feature:831667-831775:-1:exon
so has part: feature:831416-831539:-1:exon
so has part: feature:830659-830830:-1:exon
so has part: feature:830254-830358:-1:exon
so has part: feature:829759-830000:-1:exon
so has part: feature:829254-829296:-1:exon
so has part: feature:827411-828834:-1:exon

position:838196:-1
position: 838196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838130-838196:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836981-837038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832643-832745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831900-832021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831667-831775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831416-831539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830659-830830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830254-830358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829759-830000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:829254-829296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:827411-828834:-1:exon

STRADA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STRADA
product: STE20 related adaptor alpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_010724480.3
SIO_010081: STRADA
subclass of: SO_0000673
so part of: STRADA
location: complement(join(827411..828834,829254..829296,829759..830000,830254..830358,830659..830830,831416..831539,831667..831775,831900..832021,832643..832745,836981..837038,838106..838170))
location: region:827411-838170:-1
so has part: feature:838106-838170:-1:exon
so has part: feature:836981-837038:-1:exon
so has part: feature:832643-832745:-1:exon
so has part: feature:831900-832021:-1:exon
so has part: feature:831667-831775:-1:exon
so has part: feature:831416-831539:-1:exon
so has part: feature:830659-830830:-1:exon
so has part: feature:830254-830358:-1:exon
so has part: feature:829759-830000:-1:exon
so has part: feature:829254-829296:-1:exon
so has part: feature:827411-828834:-1:exon

position:838170:-1
position: 838170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838106-838170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836981-837038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:832643-832745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831900-832021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831667-831775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831416-831539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830659-830830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830254-830358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829759-830000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:829254-829296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:827411-828834:-1:exon

STRADA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STRADA
product: STE20 related adaptor alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019623387.2
SIO_010081: STRADA
subclass of: SO_0000673
so part of: STRADA
location: complement(join(827411..828834,829254..829296,829759..830000,830254..830358,830659..830830,831416..831539,831667..831775,831900..832021,832643..832745,833083..833207,836981..837028))
location: region:827411-837028:-1
so has part: feature:836981-837028:-1:exon
so has part: feature:833083-833207:-1:exon
so has part: feature:832643-832745:-1:exon
so has part: feature:831900-832021:-1:exon
so has part: feature:831667-831775:-1:exon
so has part: feature:831416-831539:-1:exon
so has part: feature:830659-830830:-1:exon
so has part: feature:830254-830358:-1:exon
so has part: feature:829759-830000:-1:exon
so has part: feature:829254-829296:-1:exon
so has part: feature:827411-828834:-1:exon

position:837028:-1
position: 837028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836981-837028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:833083-833207:-1:exon

position:833083:-1
position: 833083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833207:-1
position: 833207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:832643-832745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831900-832021:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831667-831775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831416-831539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830659-830830:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830254-830358:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829759-830000:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:829254-829296:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:827411-828834:-1:exon

STRADA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STRADA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: STE20-related kinase adapter protein alpha isoform X2
translation: MSFLRWVSEKFIVEGLREFELFGEQPPGDSRRKTNEASSESIASSHKSDTMSNFLPDSSCYELLTIIGRGFEDLMVVNLARYKPSGEYVTVRRVNLEACTNEMVTFLQGELHVSKLFNHPNIVPYKATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLKVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSIGITACELANGHVPFKDMPSTQMLLEKLNGTVPCLLDTTTIPADELTMKTSRSSANYGLGESMAVSNVRAANGESTLHPYLRTFSTCFHNFVGQCLQRNPDFRPSAGALLNHPFFKQIKRRASEALPELLRPVTPITNFEGTRPQDPSGIFGLVSNLEQLDVDDWEF
SIO_010081: STRADA
subclass of: SO_0000673
so part of: STRADA
location: complement(join(828682..828834,829254..829296,829759..830000,830254..830358,830659..830830,831416..831539,831667..831775,831900..832021,832643..832745,836172..836200,836981..837038,838130..838141))
location: region:828682-838141:-1
so has part: feature:838130-838141:-1:exon
so has part: feature:836981-837038:-1:exon
so has part: feature:836172-836200:-1:exon
so has part: feature:832643-832745:-1:exon
so has part: feature:831900-832021:-1:exon
so has part: feature:831667-831775:-1:exon
so has part: feature:831416-831539:-1:exon
so has part: feature:830659-830830:-1:exon
so has part: feature:830254-830358:-1:exon
so has part: feature:829759-830000:-1:exon
so has part: feature:829254-829296:-1:exon
so has part: feature:828682-828834:-1:exon

XP_010722780.1
type: Protein
SIO_000068: ncbiprotein

position:828682:-1
position: 828682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:838141:-1
position: 838141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838130-838141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836981-837038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:836172-836200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832643-832745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831900-832021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831667-831775:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831416-831539:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830659-830830:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830254-830358:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:829759-830000:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829254-829296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:828682-828834:-1:exon

STRADA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STRADA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: STE20-related kinase adapter protein alpha isoform X1
translation: MSFLVSKPERIRRWVSEKFIVEGLREFELFGEQPPGDSRRKTNEASSESIASSHKSDTMSNFLPDSSCYELLTIIGRGFEDLMVVNLARYKPSGEYVTVRRVNLEACTNEMVTFLQGELHVSKLFNHPNIVPYKATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLKVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSIGITACELANGHVPFKDMPSTQMLLEKLNGTVPCLLDTTTIPADELTMKTSRSSANYGLGESMAVSNVRAANGESTLHPYLRTFSTCFHNFVGQCLQRNPDFRPSAGALLNHPFFKQIKRRASEALPELLRPVTPITNFEGTRPQDPSGIFGLVSNLEQLDVDDWEF
SIO_010081: STRADA
subclass of: SO_0000673
so part of: STRADA
location: complement(join(828682..828834,829254..829296,829759..830000,830254..830358,830659..830830,831416..831539,831667..831775,831900..832021,832643..832745,836172..836200,836981..837038,838106..838141))
location: region:828682-838141:-1
so has part: feature:838106-838141:-1:exon
so has part: feature:836981-837038:-1:exon
so has part: feature:836172-836200:-1:exon
so has part: feature:832643-832745:-1:exon
so has part: feature:831900-832021:-1:exon
so has part: feature:831667-831775:-1:exon
so has part: feature:831416-831539:-1:exon
so has part: feature:830659-830830:-1:exon
so has part: feature:830254-830358:-1:exon
so has part: feature:829759-830000:-1:exon
so has part: feature:829254-829296:-1:exon
so has part: feature:828682-828834:-1:exon

XP_010722779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:838106-838141:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836981-837038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:836172-836200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:832643-832745:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831900-832021:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831667-831775:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:831416-831539:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:830659-830830:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:830254-830358:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:829759-830000:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:829254-829296:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:828682-828834:-1:exon

STRADA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STRADA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: STE20-related kinase adapter protein alpha isoform X3
translation: MFCASTAFAQTNEASSESIASSHKSDTMSNFLPDSSCYELLTIIGRGFEDLMVVNLARYKPSGEYVTVRRVNLEACTNEMVTFLQGELHVSKLFNHPNIVPYKATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLKVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSIGITACELANGHVPFKDMPSTQMLLEKLNGTVPCLLDTTTIPADELTMKTSRSSANYGLGESMAVSNVRAANGESTLHPYLRTFSTCFHNFVGQCLQRNPDFRPSAGALLNHPFFKQIKRRASEALPELLRPVTPITNFEGTRPQDPSGIFGLVSNLEQLDVDDWEF
SIO_010081: STRADA
subclass of: SO_0000673
so part of: STRADA
location: complement(join(828682..828834,829254..829296,829759..830000,830254..830358,830659..830830,831416..831539,831667..831775,831900..832021,832643..832745,833083..833112))
location: region:828682-833112:-1
so has part: feature:833083-833112:-1:exon
so has part: feature:832643-832745:-1:exon
so has part: feature:831900-832021:-1:exon
so has part: feature:831667-831775:-1:exon
so has part: feature:831416-831539:-1:exon
so has part: feature:830659-830830:-1:exon
so has part: feature:830254-830358:-1:exon
so has part: feature:829759-830000:-1:exon
so has part: feature:829254-829296:-1:exon
so has part: feature:828682-828834:-1:exon

XP_019478932.1
type: Protein
SIO_000068: ncbiprotein

position:833112:-1
position: 833112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:833083-833112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832643-832745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831900-832021:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831667-831775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831416-831539:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830659-830830:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830254-830358:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829759-830000:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:829254-829296:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:828682-828834:-1:exon

STRADA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STRADA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: STE20-related kinase adapter protein alpha isoform X4
translation: MSNFLPDSSCYELLTIIGRGFEDLMVVNLARYKPSGEYVTVRRVNLEACTNEMVTFLQGELHVSKLFNHPNIVPYKATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLKVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSIGITACELANGHVPFKDMPSTQMLLEKLNGTVPCLLDTTTIPADELTMKTSRSSANYGLGESMAVSNVRAANGESTLHPYLRTFSTCFHNFVGQCLQRNPDFRPSAGALLNHPFFKQIKRRASEALPELLRPVTPITNFEGTRPQDPSGIFGLVSNLEQLDVDDWEF
SIO_010081: STRADA
subclass of: SO_0000673
so part of: STRADA
location: complement(join(828682..828834,829254..829296,829759..830000,830254..830358,830659..830830,831416..831539,831667..831775,831900..832021,832643..832694))
location: region:828682-832694:-1
so has part: feature:832643-832694:-1:exon
so has part: feature:831900-832021:-1:exon
so has part: feature:831667-831775:-1:exon
so has part: feature:831416-831539:-1:exon
so has part: feature:830659-830830:-1:exon
so has part: feature:830254-830358:-1:exon
so has part: feature:829759-830000:-1:exon
so has part: feature:829254-829296:-1:exon
so has part: feature:828682-828834:-1:exon

XP_010722781.1
type: Protein
SIO_000068: ncbiprotein

position:832694:-1
position: 832694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832643-832694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831900-832021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831667-831775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831416-831539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:830659-830830:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830254-830358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:829759-830000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829254-829296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:828682-828834:-1:exon

STRADA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STRADA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: STE20-related kinase adapter protein alpha isoform X4
translation: MSNFLPDSSCYELLTIIGRGFEDLMVVNLARYKPSGEYVTVRRVNLEACTNEMVTFLQGELHVSKLFNHPNIVPYKATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLKVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSIGITACELANGHVPFKDMPSTQMLLEKLNGTVPCLLDTTTIPADELTMKTSRSSANYGLGESMAVSNVRAANGESTLHPYLRTFSTCFHNFVGQCLQRNPDFRPSAGALLNHPFFKQIKRRASEALPELLRPVTPITNFEGTRPQDPSGIFGLVSNLEQLDVDDWEF
SIO_010081: STRADA
subclass of: SO_0000673
so part of: STRADA
location: complement(join(828682..828834,829254..829296,829759..830000,830254..830358,830659..830830,831416..831539,831667..831775,831900..832021,832643..832694))
location: region:828682-832694:-1
so has part: feature:832643-832694:-1:exon
so has part: feature:831900-832021:-1:exon
so has part: feature:831667-831775:-1:exon
so has part: feature:831416-831539:-1:exon
so has part: feature:830659-830830:-1:exon
so has part: feature:830254-830358:-1:exon
so has part: feature:829759-830000:-1:exon
so has part: feature:829254-829296:-1:exon
so has part: feature:828682-828834:-1:exon

XP_010722782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:832643-832694:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831900-832021:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831667-831775:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:831416-831539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:830659-830830:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830254-830358:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:829759-830000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:829254-829296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:828682-828834:-1:exon

CCDC47
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CCDC47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(838757..849154)
location: region:838757-849154:-1
so has part: feature:838757-849154:-1:exon
subclass of: SO_0000010

100543029
type: Gene
SIO_000068: ncbigene

position:838757:-1
position: 838757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:849154:-1
position: 849154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838757-849154:-1:exon

CCDC47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC47
product: coiled-coil domain containing 47, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_003213037.4
SIO_010081: CCDC47
subclass of: SO_0000673
so part of: CCDC47
location: complement(join(838757..840294,840617..840784,840952..841061,841324..841382,842341..842426,843000..843110,843789..843890,844797..844862,845470..845591,845850..846024,846117..846224,846346..846611,849049..849154))
location: region:838757-849154:-1
so has part: feature:849049-849154:-1:exon
so has part: feature:846346-846611:-1:exon
so has part: feature:846117-846224:-1:exon
so has part: feature:845850-846024:-1:exon
so has part: feature:845470-845591:-1:exon
so has part: feature:844797-844862:-1:exon
so has part: feature:843789-843890:-1:exon
so has part: feature:843000-843110:-1:exon
so has part: feature:842341-842426:-1:exon
so has part: feature:841324-841382:-1:exon
so has part: feature:840952-841061:-1:exon
so has part: feature:840617-840784:-1:exon
so has part: feature:838757-840294:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:849049-849154:-1:exon

position:849049:-1
position: 849049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:846346-846611:-1:exon

position:846346:-1
position: 846346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846611:-1
position: 846611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:846117-846224:-1:exon

position:846117:-1
position: 846117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846224:-1
position: 846224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:845850-846024:-1:exon

position:845850:-1
position: 845850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846024:-1
position: 846024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:845470-845591:-1:exon

position:845470:-1
position: 845470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845591:-1
position: 845591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:844797-844862:-1:exon

position:844797:-1
position: 844797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844862:-1
position: 844862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:843789-843890:-1:exon

position:843789:-1
position: 843789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843890:-1
position: 843890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:843000-843110:-1:exon

position:843000:-1
position: 843000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843110:-1
position: 843110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:842341-842426:-1:exon

position:842341:-1
position: 842341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842426:-1
position: 842426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:841324-841382:-1:exon

position:841324:-1
position: 841324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841382:-1
position: 841382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:840952-841061:-1:exon

position:840952:-1
position: 840952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841061:-1
position: 841061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:840617-840784:-1:exon

position:840617:-1
position: 840617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840784:-1
position: 840784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:838757-840294:-1:exon

position:840294:-1
position: 840294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC47
product: coiled-coil domain containing 47, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 204 samples with support for all annotated introns
transcript id: XM_010724481.1
SIO_010081: CCDC47
subclass of: SO_0000673
so part of: CCDC47
location: complement(join(838757..840294,840617..840784,840952..841061,841324..841382,842341..842426,843000..843110,843789..843890,844797..844862,845470..845591,845850..846024,846117..846224,846346..846611,848898..849042))
location: region:838757-849042:-1
so has part: feature:848898-849042:-1:exon
so has part: feature:846346-846611:-1:exon
so has part: feature:846117-846224:-1:exon
so has part: feature:845850-846024:-1:exon
so has part: feature:845470-845591:-1:exon
so has part: feature:844797-844862:-1:exon
so has part: feature:843789-843890:-1:exon
so has part: feature:843000-843110:-1:exon
so has part: feature:842341-842426:-1:exon
so has part: feature:841324-841382:-1:exon
so has part: feature:840952-841061:-1:exon
so has part: feature:840617-840784:-1:exon
so has part: feature:838757-840294:-1:exon

position:849042:-1
position: 849042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:848898-849042:-1:exon

position:848898:-1
position: 848898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:846346-846611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846117-846224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845850-846024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845470-845591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844797-844862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:843789-843890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:843000-843110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:842341-842426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:841324-841382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:840952-841061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840617-840784:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:838757-840294:-1:exon

CCDC47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC47
product: coiled-coil domain containing 47, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_031557047.1
SIO_010081: CCDC47
subclass of: SO_0000673
so part of: CCDC47
location: complement(join(838757..840294,840617..840784,840952..841061,841324..841382,842341..842426,843000..843110,843789..843890,844797..844862,845470..845591,845850..846024,846117..846224,846346..846611,847265..847298))
location: region:838757-847298:-1
so has part: feature:847265-847298:-1:exon
so has part: feature:846346-846611:-1:exon
so has part: feature:846117-846224:-1:exon
so has part: feature:845850-846024:-1:exon
so has part: feature:845470-845591:-1:exon
so has part: feature:844797-844862:-1:exon
so has part: feature:843789-843890:-1:exon
so has part: feature:843000-843110:-1:exon
so has part: feature:842341-842426:-1:exon
so has part: feature:841324-841382:-1:exon
so has part: feature:840952-841061:-1:exon
so has part: feature:840617-840784:-1:exon
so has part: feature:838757-840294:-1:exon

position:847298:-1
position: 847298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:847265-847298:-1:exon

position:847265:-1
position: 847265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:846346-846611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846117-846224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845850-846024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845470-845591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844797-844862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:843789-843890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:843000-843110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:842341-842426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:841324-841382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:840952-841061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840617-840784:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:838757-840294:-1:exon

CCDC47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 47 isoform X1
translation: MGELRSSKMKNLYIFFAVLLIPWSFSLAKYDEFEDGDDIMEYDDNDFAEFEDVNEDAVTESPQRIITTEDDEEEATVELEGQDENQEDFDDTDAQEGDTESEPYDDEEFEGYEEKPDASPGKNKDPITIVNVPAHLQNSWESYYMEILMVTGLLAYIMNYIIGKNKNNRLAHAWFNTHRELLESNFALVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARMMRPACDQVQIKVTMNDDDMDTYVFAVGTRKALVRLQKEMQDLSEFCSDKPKSGAKYGLPDSLAILSEMGEVTEGMMDAKMIHFLTHYADKIESVQFSDQFSGPKLMQEEGQLTKLPETKKTLLFTFNVPGSGNTSPKDMESLLPLMSMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKKLEKKQMKMKQIKVKAM
SIO_010081: CCDC47
subclass of: SO_0000673
so part of: CCDC47
location: complement(join(840214..840294,840617..840784,840952..841061,841324..841382,842341..842426,843000..843110,843789..843890,844797..844862,845470..845591,845850..846024,846117..846224,846346..846611,847265..847283))
location: region:840214-847283:-1
so has part: feature:847265-847283:-1:exon
so has part: feature:846346-846611:-1:exon
so has part: feature:846117-846224:-1:exon
so has part: feature:845850-846024:-1:exon
so has part: feature:845470-845591:-1:exon
so has part: feature:844797-844862:-1:exon
so has part: feature:843789-843890:-1:exon
so has part: feature:843000-843110:-1:exon
so has part: feature:842341-842426:-1:exon
so has part: feature:841324-841382:-1:exon
so has part: feature:840952-841061:-1:exon
so has part: feature:840617-840784:-1:exon
so has part: feature:840214-840294:-1:exon

XP_031412907.1
type: Protein
SIO_000068: ncbiprotein

position:840214:-1
position: 840214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:847283:-1
position: 847283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:847265-847283:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:846346-846611:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:846117-846224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845850-846024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845470-845591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:844797-844862:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:843789-843890:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:843000-843110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:842341-842426:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:841324-841382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:840952-841061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840617-840784:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:840214-840294:-1:exon

CCDC47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 47 isoform X2
translation: MKNLYIFFAVLLIPWSFSLAKYDEFEDGDDIMEYDDNDFAEFEDVNEDAVTESPQRIITTEDDEEEATVELEGQDENQEDFDDTDAQEGDTESEPYDDEEFEGYEEKPDASPGKNKDPITIVNVPAHLQNSWESYYMEILMVTGLLAYIMNYIIGKNKNNRLAHAWFNTHRELLESNFALVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARMMRPACDQVQIKVTMNDDDMDTYVFAVGTRKALVRLQKEMQDLSEFCSDKPKSGAKYGLPDSLAILSEMGEVTEGMMDAKMIHFLTHYADKIESVQFSDQFSGPKLMQEEGQLTKLPETKKTLLFTFNVPGSGNTSPKDMESLLPLMSMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKKLEKKQMKMKQIKVKAM
SIO_010081: CCDC47
subclass of: SO_0000673
so part of: CCDC47
location: complement(join(840214..840294,840617..840784,840952..841061,841324..841382,842341..842426,843000..843110,843789..843890,844797..844862,845470..845591,845850..846024,846117..846224,846346..846606))
location: region:840214-846606:-1
so has part: feature:846346-846606:-1:exon
so has part: feature:846117-846224:-1:exon
so has part: feature:845850-846024:-1:exon
so has part: feature:845470-845591:-1:exon
so has part: feature:844797-844862:-1:exon
so has part: feature:843789-843890:-1:exon
so has part: feature:843000-843110:-1:exon
so has part: feature:842341-842426:-1:exon
so has part: feature:841324-841382:-1:exon
so has part: feature:840952-841061:-1:exon
so has part: feature:840617-840784:-1:exon
so has part: feature:840214-840294:-1:exon

XP_003213085.1
type: Protein
SIO_000068: ncbiprotein

position:846606:-1
position: 846606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846346-846606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:846117-846224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:845850-846024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845470-845591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:844797-844862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843789-843890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:843000-843110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842341-842426:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:841324-841382:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:840952-841061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:840617-840784:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840214-840294:-1:exon

CCDC47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 47 isoform X2
translation: MKNLYIFFAVLLIPWSFSLAKYDEFEDGDDIMEYDDNDFAEFEDVNEDAVTESPQRIITTEDDEEEATVELEGQDENQEDFDDTDAQEGDTESEPYDDEEFEGYEEKPDASPGKNKDPITIVNVPAHLQNSWESYYMEILMVTGLLAYIMNYIIGKNKNNRLAHAWFNTHRELLESNFALVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLKFLKRQDLLNVLARMMRPACDQVQIKVTMNDDDMDTYVFAVGTRKALVRLQKEMQDLSEFCSDKPKSGAKYGLPDSLAILSEMGEVTEGMMDAKMIHFLTHYADKIESVQFSDQFSGPKLMQEEGQLTKLPETKKTLLFTFNVPGSGNTSPKDMESLLPLMSMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKKLEKKQMKMKQIKVKAM
SIO_010081: CCDC47
subclass of: SO_0000673
so part of: CCDC47
location: complement(join(840214..840294,840617..840784,840952..841061,841324..841382,842341..842426,843000..843110,843789..843890,844797..844862,845470..845591,845850..846024,846117..846224,846346..846606))
location: region:840214-846606:-1
so has part: feature:846346-846606:-1:exon
so has part: feature:846117-846224:-1:exon
so has part: feature:845850-846024:-1:exon
so has part: feature:845470-845591:-1:exon
so has part: feature:844797-844862:-1:exon
so has part: feature:843789-843890:-1:exon
so has part: feature:843000-843110:-1:exon
so has part: feature:842341-842426:-1:exon
so has part: feature:841324-841382:-1:exon
so has part: feature:840952-841061:-1:exon
so has part: feature:840617-840784:-1:exon
so has part: feature:840214-840294:-1:exon

XP_010722783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:846346-846606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:846117-846224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:845850-846024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:845470-845591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:844797-844862:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:843789-843890:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:843000-843110:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:842341-842426:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:841324-841382:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:840952-841061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:840617-840784:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:840214-840294:-1:exon

MAP3K3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MAP3K3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 859035..877081
location: region:859035-877081:1
so has part: feature:859035-877081:1:exon
subclass of: SO_0000010

100542719
type: Gene
SIO_000068: ncbigene

position:859035:1
position: 859035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:877081:1
position: 877081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859035-877081:1:exon

MAP3K3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MAP3K3
product: mitogen-activated protein kinase kinase kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 197 samples with support for all annotated introns
transcript id: XM_010724484.3
SIO_010081: MAP3K3
subclass of: SO_0000673
so part of: MAP3K3
location: join(859035..859268,861066..861139,862910..862977,863215..863307,864114..864305,866143..866291,868094..868225,868803..868932,870571..870748,873126..877081)
location: region:859035-877081:1
so has part: feature:859035-859268:1:exon
so has part: feature:861066-861139:1:exon
so has part: feature:862910-862977:1:exon
so has part: feature:863215-863307:1:exon
so has part: feature:864114-864305:1:exon
so has part: feature:866143-866291:1:exon
so has part: feature:868094-868225:1:exon
so has part: feature:868803-868932:1:exon
so has part: feature:870571-870748:1:exon
so has part: feature:873126-877081:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:859035-859268:1:exon

position:859268:1
position: 859268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:861066-861139:1:exon

position:861066:1
position: 861066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:861139:1
position: 861139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:862910-862977:1:exon

position:862910:1
position: 862910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:862977:1
position: 862977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863215-863307:1:exon

position:863215:1
position: 863215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863307:1
position: 863307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:864114-864305:1:exon

position:864114:1
position: 864114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:864305:1
position: 864305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:866143-866291:1:exon

position:866143:1
position: 866143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866291:1
position: 866291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:868094-868225:1:exon

position:868094:1
position: 868094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868225:1
position: 868225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:868803-868932:1:exon

position:868803:1
position: 868803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:868932:1
position: 868932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:870571-870748:1:exon

position:870571:1
position: 870571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:870748:1
position: 870748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:873126-877081:1:exon

position:873126:1
position: 873126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAP3K3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MAP3K3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase kinase kinase 3
translation: MNIWILCTCRRHLISVIIKVRHVLLSGSGSQNTGRSSPPPGYVPERQQRIARQGSYTSINSEGEFIPETNEQCMLDPLSSAENSVSGSCQSLDRSADSPSFRKSRMSRAQSFPDNRQEFSDRENQIYDKAGKGGTYPRRYNVSMQHKDYNDGRRTFPRIRRHQGNLFTLVPSSRSLSTNGENLGLALQYLDSRGRLRSADSENALAVQERNIPTKSPSAPINWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHCRDFLKRIFVEARHRPSAEELLRHQFAQLQY
SIO_010081: MAP3K3
subclass of: SO_0000673
so part of: MAP3K3
location: join(859050..859268,861066..861139,862910..862977,863215..863307,864114..864305,866143..866291,868094..868225,868803..868932,870571..870748,873126..873354)
location: region:859050-873354:1
so has part: feature:859050-859268:1:exon
so has part: feature:861066-861139:1:exon
so has part: feature:862910-862977:1:exon
so has part: feature:863215-863307:1:exon
so has part: feature:864114-864305:1:exon
so has part: feature:866143-866291:1:exon
so has part: feature:868094-868225:1:exon
so has part: feature:868803-868932:1:exon
so has part: feature:870571-870748:1:exon
so has part: feature:873126-873354:1:exon

XP_010722786.1
type: Protein
SIO_000068: ncbiprotein

position:859050:1
position: 859050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:873354:1
position: 873354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:859050-859268:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:861066-861139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:862910-862977:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:863215-863307:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:864114-864305:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:866143-866291:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:868094-868225:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:868803-868932:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:870571-870748:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:873126-873354:1:exon

LIMD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LIMD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(882154..886866)
location: region:882154-886866:-1
so has part: feature:882154-886866:-1:exon
subclass of: SO_0000010

100542561
type: Gene
SIO_000068: ncbigene

position:882154:-1
position: 882154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886866:-1
position: 886866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882154-886866:-1:exon

LIMD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LIMD2
product: LIM domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_003213034.4
SIO_010081: LIMD2
subclass of: SO_0000673
so part of: LIMD2
location: complement(join(882154..882902,883122..883261,883380..883424,885324..885459,886773..886866))
location: region:882154-886866:-1
so has part: feature:886773-886866:-1:exon
so has part: feature:885324-885459:-1:exon
so has part: feature:883380-883424:-1:exon
so has part: feature:883122-883261:-1:exon
so has part: feature:882154-882902:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:886773-886866:-1:exon

position:886773:-1
position: 886773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:885324-885459:-1:exon

position:885324:-1
position: 885324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885459:-1
position: 885459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:883380-883424:-1:exon

position:883380:-1
position: 883380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883424:-1
position: 883424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:883122-883261:-1:exon

position:883122:-1
position: 883122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:883261:-1
position: 883261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:882154-882902:-1:exon

position:882902:-1
position: 882902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIMD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LIMD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain-containing protein 2
translation: MFQASEAASTTPSHEAKSNSGGSTVQRSKSFSLKAQVKEMCTACQKTVYPMERLVADKFVFHNSCFCCKHCHAKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDEGFGRKQHKELWVHKEVESGTKSA
SIO_010081: LIMD2
subclass of: SO_0000673
so part of: LIMD2
location: complement(join(882743..882902,883122..883261,883380..883424,885324..885365))
location: region:882743-885365:-1
so has part: feature:885324-885365:-1:exon
so has part: feature:883380-883424:-1:exon
so has part: feature:883122-883261:-1:exon
so has part: feature:882743-882902:-1:exon

XP_003213082.1
type: Protein
SIO_000068: ncbiprotein

position:882743:-1
position: 882743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885365:-1
position: 885365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885324-885365:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:883380-883424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:883122-883261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:882743-882902:-1:exon

LOC104914565
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914565
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 891734..901945
location: region:891734-901945:1
so has part: feature:891734-901945:1:exon
subclass of: SO_0000011

104914565
type: Gene
SIO_000068: ncbigene

position:891734:1
position: 891734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901945:1
position: 901945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891734-901945:1:exon

LOC104914565
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104914565
product: uncharacterized LOC104914565
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 155 samples with support for all annotated introns
transcript id: XR_796064.3
SIO_010081: LOC104914565
subclass of: SO_0000673
so part of: LOC104914565
location: join(891734..891879,892231..892319,895179..895219,898007..898106,898964..899077,901802..901945)
location: region:891734-901945:1
so has part: feature:891734-891879:1:exon
so has part: feature:892231-892319:1:exon
so has part: feature:895179-895219:1:exon
so has part: feature:898007-898106:1:exon
so has part: feature:898964-899077:1:exon
so has part: feature:901802-901945:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891734-891879:1:exon

position:891879:1
position: 891879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892231-892319:1:exon

position:892231:1
position: 892231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892319:1
position: 892319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:895179-895219:1:exon

position:895179:1
position: 895179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895219:1
position: 895219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:898007-898106:1:exon

position:898007:1
position: 898007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898106:1
position: 898106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:898964-899077:1:exon

position:898964:1
position: 898964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899077:1
position: 899077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:901802-901945:1:exon

position:901802:1
position: 901802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCAF7
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DCAF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 906535..922282
location: region:906535-922282:1
so has part: feature:906535-922282:1:exon
subclass of: SO_0000010

100542405
type: Gene
SIO_000068: ncbigene

position:906535:1
position: 906535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922282:1
position: 922282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906535-922282:1:exon

DCAF7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DCAF7
product: DDB1 and CUL4 associated factor 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_010724486.2
SIO_010081: DCAF7
subclass of: SO_0000673
so part of: DCAF7
location: join(906535..906700,912476..912634,913092..913203,913582..913700,914327..914536,915120..915237,915786..922282)
location: region:906535-922282:1
so has part: feature:906535-906700:1:exon
so has part: feature:912476-912634:1:exon
so has part: feature:913092-913203:1:exon
so has part: feature:913582-913700:1:exon
so has part: feature:914327-914536:1:exon
so has part: feature:915120-915237:1:exon
so has part: feature:915786-922282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:906535-906700:1:exon

position:906700:1
position: 906700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:912476-912634:1:exon

position:912476:1
position: 912476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912634:1
position: 912634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:913092-913203:1:exon

position:913092:1
position: 913092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913203:1
position: 913203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:913582-913700:1:exon

position:913582:1
position: 913582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913700:1
position: 913700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:914327-914536:1:exon

position:914327:1
position: 914327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914536:1
position: 914536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:915120-915237:1:exon

position:915120:1
position: 915120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915237:1
position: 915237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:915786-922282:1:exon

position:915786:1
position: 915786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCAF7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DCAF7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 7
translation: MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSEFICRNTFDHPYPTTKLMWIPDTKGVYPDLLATSGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV
SIO_010081: DCAF7
subclass of: SO_0000673
so part of: DCAF7
location: join(906563..906700,912476..912634,913092..913203,913582..913700,914327..914536,915120..915237,915786..915958)
location: region:906563-915958:1
so has part: feature:906563-906700:1:exon
so has part: feature:912476-912634:1:exon
so has part: feature:913092-913203:1:exon
so has part: feature:913582-913700:1:exon
so has part: feature:914327-914536:1:exon
so has part: feature:915120-915237:1:exon
so has part: feature:915786-915958:1:exon

XP_010722788.1
type: Protein
SIO_000068: ncbiprotein

position:906563:1
position: 906563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915958:1
position: 915958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906563-906700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912476-912634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:913092-913203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913582-913700:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914327-914536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:915120-915237:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:915786-915958:1:exon

KCNH6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KCNH6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 930760..956591
location: region:930760-956591:1
so has part: feature:930760-956591:1:exon
subclass of: SO_0000010

104914566
type: Gene
SIO_000068: ncbigene

position:930760:1
position: 930760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956591:1
position: 956591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930760-956591:1:exon

KCNH6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCNH6
product: potassium voltage-gated channel subfamily H member 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010724487.3
SIO_010081: KCNH6
subclass of: SO_0000673
so part of: KCNH6
location: join(930760..930985,937503..937658,939886..939995,941652..941964,943302..943513,947841..948269,949006..949405,949670..949869,951456..951708,952179..952372,952577..952676,952927..953214,953609..953789,954719..954917,955262..956591)
location: region:930760-956591:1
so has part: feature:930760-930985:1:exon
so has part: feature:937503-937658:1:exon
so has part: feature:939886-939995:1:exon
so has part: feature:941652-941964:1:exon
so has part: feature:943302-943513:1:exon
so has part: feature:947841-948269:1:exon
so has part: feature:949006-949405:1:exon
so has part: feature:949670-949869:1:exon
so has part: feature:951456-951708:1:exon
so has part: feature:952179-952372:1:exon
so has part: feature:952577-952676:1:exon
so has part: feature:952927-953214:1:exon
so has part: feature:953609-953789:1:exon
so has part: feature:954719-954917:1:exon
so has part: feature:955262-956591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:930760-930985:1:exon

position:930985:1
position: 930985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:937503-937658:1:exon

position:937503:1
position: 937503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937658:1
position: 937658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:939886-939995:1:exon

position:939886:1
position: 939886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939995:1
position: 939995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:941652-941964:1:exon

position:941652:1
position: 941652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941964:1
position: 941964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:943302-943513:1:exon

position:943302:1
position: 943302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:943513:1
position: 943513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:947841-948269:1:exon

position:947841:1
position: 947841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948269:1
position: 948269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:949006-949405:1:exon

position:949006:1
position: 949006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949405:1
position: 949405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:949670-949869:1:exon

position:949670:1
position: 949670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949869:1
position: 949869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:951456-951708:1:exon

position:951456:1
position: 951456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951708:1
position: 951708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:952179-952372:1:exon

position:952179:1
position: 952179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952372:1
position: 952372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:952577-952676:1:exon

position:952577:1
position: 952577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952676:1
position: 952676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:952927-953214:1:exon

position:952927:1
position: 952927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953214:1
position: 953214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:953609-953789:1:exon

position:953609:1
position: 953609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953789:1
position: 953789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:954719-954917:1:exon

position:954719:1
position: 954719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954917:1
position: 954917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:955262-956591:1:exon

position:955262:1
position: 955262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNH6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCNH6
product: potassium voltage-gated channel subfamily H member 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010724488.3
SIO_010081: KCNH6
subclass of: SO_0000673
so part of: KCNH6
location: join(930760..930985,937503..937658,943302..943513,947841..948269,949006..949405,949670..949869,951456..951708,952179..952372,952577..952676,952927..953214,953609..953789,954719..954917,955262..956591)
location: region:930760-956591:1
so has part: feature:930760-930985:1:exon
so has part: feature:937503-937658:1:exon
so has part: feature:943302-943513:1:exon
so has part: feature:947841-948269:1:exon
so has part: feature:949006-949405:1:exon
so has part: feature:949670-949869:1:exon
so has part: feature:951456-951708:1:exon
so has part: feature:952179-952372:1:exon
so has part: feature:952577-952676:1:exon
so has part: feature:952927-953214:1:exon
so has part: feature:953609-953789:1:exon
so has part: feature:954719-954917:1:exon
so has part: feature:955262-956591:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:930760-930985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937503-937658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943302-943513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947841-948269:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949006-949405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949670-949869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:951456-951708:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:952179-952372:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952577-952676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952927-953214:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953609-953789:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:954719-954917:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:955262-956591:1:exon

KCNH6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCNH6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily H member 6 isoform X1
translation: MENCAIIYCNDGFCEMFGYSRVEVMQRPCTCDFLTGPDTTKSSIAQLTQALLGSEECKLEILYYRKDTSCFRCLVDVVPVKNEDGVVIMFILNFEDLAQLIAKSSGRSLHHRLSQSWRAGEGRRLKFSLPSLRRLKAQRNSLPTSEFDGVAIDYGKPGGDSLILRDLKTSPKENCVQSETESLLEKERRPSLEADPTLQHPIPKQEPPSLGPRGSYSAWGFIRSHPGGSFHSLRRVSSLDNFEAARSEFQRKFRERRANSEASHVKPNPPNSTSDSDLMKYRTISQIPQFTLNFVEFNLEKHRSGSTTEIEIIAPHKVTERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRWTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLNEEQVEEKHWNCSYSCDPLNIIDLIVDIMFIVDIVINFRTTYVNINDEVVSHPGKIAIHYFKGWFLIDMVAAIPFDLLIFRSGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYMEHKIGWLDNLGDQIGKRYNDSDLSSGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPDCLQADICLHLNRTLLQNCKAFRGASKGCLRALAMKFKTTHAPPGDTLVHYGDVLTTLYFISRGSIEILKEDIVVAILGKNDIFGEPISLYARPGKSNADVRALTYCDLHKIQREDLLEVLDMYPAFSDNFWSNLEITFNLRDADSVPRTPLSEEYDCTYRRVRRRKHSLCQPNKPDPDTGTSDAEQYHTYSELTNPQDPLSKDQWDDVGSSTTPCSQTSDDEAKPGSPTKAEPFPLSKKDDFALPALSLITASASGTEVSKQAAESSQSYAATPLDIPNMFTFWEDQRPNHHPEPLQHVSLVHSSRDIPLHSDYRPGQIESRLELLQAQLSRLESRMSSDINIILQLLQRQLSQVPPAYSPISPSSHNLAMYGIIPRSLEPLTPCAPLEDEQRMAPGQSPSYTEVEKFHLKSRDSLSSGMHLTVASDETMTVYSEQEHHSPPLPNPEPPNQRAPNTQGLLRGSRFPSLPEHLEASSEHPDIQRHLSDPVLPGS
SIO_010081: KCNH6
subclass of: SO_0000673
so part of: KCNH6
location: join(930784..930985,937503..937658,939886..939995,941652..941964,943302..943513,947841..948269,949006..949405,949670..949869,951456..951708,952179..952372,952577..952676,952927..953214,953609..953789,954719..954917,955262..955549)
location: region:930784-955549:1
so has part: feature:930784-930985:1:exon
so has part: feature:937503-937658:1:exon
so has part: feature:939886-939995:1:exon
so has part: feature:941652-941964:1:exon
so has part: feature:943302-943513:1:exon
so has part: feature:947841-948269:1:exon
so has part: feature:949006-949405:1:exon
so has part: feature:949670-949869:1:exon
so has part: feature:951456-951708:1:exon
so has part: feature:952179-952372:1:exon
so has part: feature:952577-952676:1:exon
so has part: feature:952927-953214:1:exon
so has part: feature:953609-953789:1:exon
so has part: feature:954719-954917:1:exon
so has part: feature:955262-955549:1:exon

XP_010722789.1
type: Protein
SIO_000068: ncbiprotein

position:930784:1
position: 930784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955549:1
position: 955549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930784-930985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937503-937658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:939886-939995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941652-941964:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:943302-943513:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:947841-948269:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:949006-949405:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:949670-949869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:951456-951708:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952179-952372:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:952577-952676:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952927-953214:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:953609-953789:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:954719-954917:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:955262-955549:1:exon

KCNH6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCNH6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium voltage-gated channel subfamily H member 6 isoform X2
translation: MENCAIIYCNDGFCEMFGYSRVEVMQRPCTCDFLTGPDTTKSSIAQLTQALLGSEECKLEILYYRKDTSCFRCLVDVVPVKNEDGVVIMFILNFEDLAQLIAKSSGRSLHHRLSQSWRAEASHVKPNPPNSTSDSDLMKYRTISQIPQFTLNFVEFNLEKHRSGSTTEIEIIAPHKVTERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRWTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLNEEQVEEKHWNCSYSCDPLNIIDLIVDIMFIVDIVINFRTTYVNINDEVVSHPGKIAIHYFKGWFLIDMVAAIPFDLLIFRSGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYMEHKIGWLDNLGDQIGKRYNDSDLSSGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPDCLQADICLHLNRTLLQNCKAFRGASKGCLRALAMKFKTTHAPPGDTLVHYGDVLTTLYFISRGSIEILKEDIVVAILGKNDIFGEPISLYARPGKSNADVRALTYCDLHKIQREDLLEVLDMYPAFSDNFWSNLEITFNLRDADSVPRTPLSEEYDCTYRRVRRRKHSLCQPNKPDPDTGTSDAEQYHTYSELTNPQDPLSKDQWDDVGSSTTPCSQTSDDEAKPGSPTKAEPFPLSKKDDFALPALSLITASASGTEVSKQAAESSQSYAATPLDIPNMFTFWEDQRPNHHPEPLQHVSLVHSSRDIPLHSDYRPGQIESRLELLQAQLSRLESRMSSDINIILQLLQRQLSQVPPAYSPISPSSHNLAMYGIIPRSLEPLTPCAPLEDEQRMAPGQSPSYTEVEKFHLKSRDSLSSGMHLTVASDETMTVYSEQEHHSPPLPNPEPPNQRAPNTQGLLRGSRFPSLPEHLEASSEHPDIQRHLSDPVLPGS
SIO_010081: KCNH6
subclass of: SO_0000673
so part of: KCNH6
location: join(930784..930985,937503..937658,943302..943513,947841..948269,949006..949405,949670..949869,951456..951708,952179..952372,952577..952676,952927..953214,953609..953789,954719..954917,955262..955549)
location: region:930784-955549:1
so has part: feature:930784-930985:1:exon
so has part: feature:937503-937658:1:exon
so has part: feature:943302-943513:1:exon
so has part: feature:947841-948269:1:exon
so has part: feature:949006-949405:1:exon
so has part: feature:949670-949869:1:exon
so has part: feature:951456-951708:1:exon
so has part: feature:952179-952372:1:exon
so has part: feature:952577-952676:1:exon
so has part: feature:952927-953214:1:exon
so has part: feature:953609-953789:1:exon
so has part: feature:954719-954917:1:exon
so has part: feature:955262-955549:1:exon

XP_010722790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:930784-930985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937503-937658:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943302-943513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:947841-948269:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949006-949405:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949670-949869:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:951456-951708:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:952179-952372:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952577-952676:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:952927-953214:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953609-953789:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:954719-954917:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:955262-955549:1:exon

ACE
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ACE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 965688..981416
location: region:965688-981416:1
so has part: feature:965688-981416:1:exon
subclass of: SO_0000010

100542100
type: Gene
SIO_000068: ncbigene

position:965688:1
position: 965688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981416:1
position: 981416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965688-981416:1:exon

ACE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ACE
product: angiotensin I converting enzyme
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 127 samples with support for all annotated introns
transcript id: XM_010724489.3
SIO_010081: ACE
subclass of: SO_0000673
so part of: ACE
location: join(965688..965946,968721..968888,969979..970066,970496..970639,970872..971063,971195..971292,971557..971729,971938..972161,973762..973906,974205..974303,974533..974655,975147..975358,975725..975861,976016..976174,976579..976666,976869..977012,977302..977493,977623..977720,977974..978146,978493..978715,978928..979072,979273..979371,979649..979771,980286..980473,980753..981416)
location: region:965688-981416:1
so has part: feature:965688-965946:1:exon
so has part: feature:968721-968888:1:exon
so has part: feature:969979-970066:1:exon
so has part: feature:970496-970639:1:exon
so has part: feature:970872-971063:1:exon
so has part: feature:971195-971292:1:exon
so has part: feature:971557-971729:1:exon
so has part: feature:971938-972161:1:exon
so has part: feature:973762-973906:1:exon
so has part: feature:974205-974303:1:exon
so has part: feature:974533-974655:1:exon
so has part: feature:975147-975358:1:exon
so has part: feature:975725-975861:1:exon
so has part: feature:976016-976174:1:exon
so has part: feature:976579-976666:1:exon
so has part: feature:976869-977012:1:exon
so has part: feature:977302-977493:1:exon
so has part: feature:977623-977720:1:exon
so has part: feature:977974-978146:1:exon
so has part: feature:978493-978715:1:exon
so has part: feature:978928-979072:1:exon
so has part: feature:979273-979371:1:exon
so has part: feature:979649-979771:1:exon
so has part: feature:980286-980473:1:exon
so has part: feature:980753-981416:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:965688-965946:1:exon

position:965946:1
position: 965946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:968721-968888:1:exon

position:968721:1
position: 968721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968888:1
position: 968888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:969979-970066:1:exon

position:969979:1
position: 969979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970066:1
position: 970066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:970496-970639:1:exon

position:970496:1
position: 970496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:970639:1
position: 970639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:970872-971063:1:exon

position:970872:1
position: 970872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971063:1
position: 971063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:971195-971292:1:exon

position:971195:1
position: 971195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971292:1
position: 971292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:971557-971729:1:exon

position:971557:1
position: 971557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:971729:1
position: 971729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:971938-972161:1:exon

position:971938:1
position: 971938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:972161:1
position: 972161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:973762-973906:1:exon

position:973762:1
position: 973762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:973906:1
position: 973906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:974205-974303:1:exon

position:974205:1
position: 974205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974303:1
position: 974303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:974533-974655:1:exon

position:974533:1
position: 974533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:974655:1
position: 974655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:975147-975358:1:exon

position:975147:1
position: 975147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975358:1
position: 975358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:975725-975861:1:exon

position:975725:1
position: 975725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:975861:1
position: 975861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:976016-976174:1:exon

position:976016:1
position: 976016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976174:1
position: 976174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:976579-976666:1:exon

position:976579:1
position: 976579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976666:1
position: 976666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:976869-977012:1:exon

position:976869:1
position: 976869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977012:1
position: 977012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:977302-977493:1:exon

position:977302:1
position: 977302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977493:1
position: 977493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:977623-977720:1:exon

position:977623:1
position: 977623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977720:1
position: 977720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:977974-978146:1:exon

position:977974:1
position: 977974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978146:1
position: 978146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:978493-978715:1:exon

position:978493:1
position: 978493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978715:1
position: 978715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:978928-979072:1:exon

position:978928:1
position: 978928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979072:1
position: 979072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:979273-979371:1:exon

position:979273:1
position: 979273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979371:1
position: 979371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:979649-979771:1:exon

position:979649:1
position: 979649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979771:1
position: 979771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:980286-980473:1:exon

position:980286:1
position: 980286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980473:1
position: 980473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:980753-981416:1:exon

position:980753:1
position: 980753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ACE
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: angiotensin-converting enzyme
translation: MPAALGLLLPWLSLVGALQPGLEPPEFDPTEAGAVLFADAYNSTAEIVLFQSVSASWNYNTNLTTANAALQVEASLEEQNFTELWGKKAKELYGNMWSNFSDPQLKKIIGSIQTLGPSNLPLDKRQQYNTILSDMDKIYSTAKVCLDNGTCWDLEPDISDIMASSRSYKKLLYAWEGWHNAAGNPLRAKYEEFVTLSNEAYQMDGFEDTGSYWRSWYDSTTFEDDLEHLYNQLEPLYLNLHAFVRRKLYDRYGPKYINLKGPIPAHLLGNMWAQQWNNIYDLMVPYPDKPNLDVTSTMVNQGWNATHMFRVSEEFFTSLGLLEMPPEFWDKSMLEKPADGREVVCHASAWDFYNRKDFRIKQCTTVTMEQLFTVHHEMGHVQYYLQYKDQPVSFRGGANPGFHEAIGDVMSLSVSTPSHLQKIGLLSSAVEDEESNINYLLKMALEKIAFLPFGYLIDQWRWNVFNGRTPPSRYNYDWWYLRTKYQGICAPVSRNESNFDPGAKYHIPGNTPYIRYFVSFILQFQFHKALCQAANHTGPLHTCDIYMSKEAGAKLREVLKAGSSKSWQEILFNLTGTDKMDAGALLEYFSPVTTWLQEQNNKTNEVLGWPEFDWRPPVPEGYPEGIDKIVDEAQAKEFLSEYNSTAEVVWNAYTEASWDYNTNITDHNREVMLEKNLAMSKHTIEYGMRARQFDPSDFQDETVTRILNKLSVLERAALPEDELMEYNTLLSEMETTYSVAKVCRENNTCHPLDPDLTDILATSRDYNELLFAWKGWRDASGAKIKDKYKRYVELSNKAAVLNGYTDNGAYWRSLYETPTFEEDLERLYLQLQPLYLNLHAYVRRALYNKYGAEHISLRGPIPAHLLGNMWAQSWSNIFDLVMPFPDATKVDATPAMKQQGWTPKMMFEESDRFFTSLGLIPMPQEFWDKSMIEKPADGREVVCHASAWDFYNRKDFRIKQCTVVNMDDLITVHHEMGHVQYFLQYMDQPISFRDGANPGFHEAIGDVMALSVSXPKHLHSINLLDQVTENEESDINYLMSIALDKIAFLPFGYLMDQWRWKVFDGRIKEDEYNQQWWNLRLKYQGLCSPVPRSEDDFDPGAKFHIPANVPYIRYFVSFVIQFQFHEALCKAAGHTGPLHTCDIYQSKEAGKLLGDAMKLGFSKPWPEAMQLITGQPNMSAEALMSYFEPLMTWLVKENTKNGEVLGWPDYSWTPYAATELHAATDTTDFLGMSVGTKQATAGAWVLLALALVFLIVSIFLGVKLFSSRRKAFKSSSEMELK
SIO_010081: ACE
subclass of: SO_0000673
so part of: ACE
location: join(965734..965946,968721..968888,969979..970066,970496..970639,970872..971063,971195..971292,971557..971729,971938..972161,973762..973906,974205..974303,974533..974655,975147..975358,975725..975861,976016..976174,976579..976666,976869..977012,977302..977493,977623..977720,977974..978146,978493..978715,978928..979072,979273..979371,979649..979771,980286..980473,980753..980949)
location: region:965734-980949:1
so has part: feature:965734-965946:1:exon
so has part: feature:968721-968888:1:exon
so has part: feature:969979-970066:1:exon
so has part: feature:970496-970639:1:exon
so has part: feature:970872-971063:1:exon
so has part: feature:971195-971292:1:exon
so has part: feature:971557-971729:1:exon
so has part: feature:971938-972161:1:exon
so has part: feature:973762-973906:1:exon
so has part: feature:974205-974303:1:exon
so has part: feature:974533-974655:1:exon
so has part: feature:975147-975358:1:exon
so has part: feature:975725-975861:1:exon
so has part: feature:976016-976174:1:exon
so has part: feature:976579-976666:1:exon
so has part: feature:976869-977012:1:exon
so has part: feature:977302-977493:1:exon
so has part: feature:977623-977720:1:exon
so has part: feature:977974-978146:1:exon
so has part: feature:978493-978715:1:exon
so has part: feature:978928-979072:1:exon
so has part: feature:979273-979371:1:exon
so has part: feature:979649-979771:1:exon
so has part: feature:980286-980473:1:exon
so has part: feature:980753-980949:1:exon

XP_010722791.1
type: Protein
SIO_000068: ncbiprotein

position:965734:1
position: 965734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980949:1
position: 980949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:965734-965946:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:968721-968888:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969979-970066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:970496-970639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:970872-971063:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:971195-971292:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:971557-971729:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:971938-972161:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:973762-973906:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:974205-974303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:974533-974655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:975147-975358:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:975725-975861:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:976016-976174:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:976579-976666:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:976869-977012:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:977302-977493:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:977623-977720:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:977974-978146:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:978493-978715:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:978928-979072:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:979273-979371:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:979649-979771:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:980286-980473:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:980753-980949:1:exon

LOC100541791
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100541791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 998866..1066414
location: region:998866-1066414:1
so has part: feature:998866-1066414:1:exon
subclass of: SO_0000010

100541791
type: Gene
SIO_000068: ncbigene

position:998866:1
position: 998866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066414:1
position: 1066414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998866-1066414:1:exon

LOC100541791
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100541791
product: protein TANC2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019623389.1
SIO_010081: LOC100541791
subclass of: SO_0000673
so part of: LOC100541791
location: join(998866..999150,1006156..1006281,1012379..1012660,1015608..1015741,1025069..1025300,1027498..1027664,1028436..1029043,1039496..1039604,1042115..1042237,1042450..1042686,1044607..1044792,1045500..1045593,1049801..1049934,1050394..1050517,1053659..1053834,1054465..1054597,1055126..1055155,1055955..1056046,1057535..1057681,1060030..1060130,1062012..1066414)
location: region:998866-1066414:1
so has part: feature:998866-999150:1:exon
so has part: feature:1006156-1006281:1:exon
so has part: feature:1012379-1012660:1:exon
so has part: feature:1015608-1015741:1:exon
so has part: feature:1025069-1025300:1:exon
so has part: feature:1027498-1027664:1:exon
so has part: feature:1028436-1029043:1:exon
so has part: feature:1039496-1039604:1:exon
so has part: feature:1042115-1042237:1:exon
so has part: feature:1042450-1042686:1:exon
so has part: feature:1044607-1044792:1:exon
so has part: feature:1045500-1045593:1:exon
so has part: feature:1049801-1049934:1:exon
so has part: feature:1050394-1050517:1:exon
so has part: feature:1053659-1053834:1:exon
so has part: feature:1054465-1054597:1:exon
so has part: feature:1055126-1055155:1:exon
so has part: feature:1055955-1056046:1:exon
so has part: feature:1057535-1057681:1:exon
so has part: feature:1060030-1060130:1:exon
so has part: feature:1062012-1066414:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:998866-999150:1:exon

position:999150:1
position: 999150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1006156-1006281:1:exon

position:1006156:1
position: 1006156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006281:1
position: 1006281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1012379-1012660:1:exon

position:1012379:1
position: 1012379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012660:1
position: 1012660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1015608-1015741:1:exon

position:1015608:1
position: 1015608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1015741:1
position: 1015741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1025069-1025300:1:exon

position:1025069:1
position: 1025069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025300:1
position: 1025300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1027498-1027664:1:exon

position:1027498:1
position: 1027498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027664:1
position: 1027664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1028436-1029043:1:exon

position:1028436:1
position: 1028436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029043:1
position: 1029043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1039496-1039604:1:exon

position:1039496:1
position: 1039496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1039604:1
position: 1039604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1042115-1042237:1:exon

position:1042115:1
position: 1042115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042237:1
position: 1042237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1042450-1042686:1:exon

position:1042450:1
position: 1042450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1042686:1
position: 1042686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1044607-1044792:1:exon

position:1044607:1
position: 1044607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044792:1
position: 1044792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1045500-1045593:1:exon

position:1045500:1
position: 1045500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045593:1
position: 1045593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1049801-1049934:1:exon

position:1049801:1
position: 1049801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1049934:1
position: 1049934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1050394-1050517:1:exon

position:1050394:1
position: 1050394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050517:1
position: 1050517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1053659-1053834:1:exon

position:1053659:1
position: 1053659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053834:1
position: 1053834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1054465-1054597:1:exon

position:1054465:1
position: 1054465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054597:1
position: 1054597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1055126-1055155:1:exon

position:1055126:1
position: 1055126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055155:1
position: 1055155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1055955-1056046:1:exon

position:1055955:1
position: 1055955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056046:1
position: 1056046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1057535-1057681:1:exon

position:1057535:1
position: 1057535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057681:1
position: 1057681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1060030-1060130:1:exon

position:1060030:1
position: 1060030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060130:1
position: 1060130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1062012-1066414:1:exon

position:1062012:1
position: 1062012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100541791
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100541791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TANC2
translation: MGSGGNLKPWQSQKSSMDSCLYRVDENMTASTYSLNKIPERNLETVLSQSVQSIPLYLMPRPNSVAATSSAHLEDLAYLDEQRHTPLRTSLRMPRQSVAGARTQQDLRVRFAPYRPPDISLKPLLFEVPSITTESVFVGRDWVFHEIDAQLQSSNASVNRGVVIVGNIGFGKTAIISRLVALSCHGTRMRQIASDSPHASPKHVDANRELPLTQPPSAHSSIASGSCPGTPEMRRRQEEAMRRLASQVVAYHYCQADNAYTCLVPEFVHNVAALLCRSPQFVAYREQLLREPHLQSMLSLRSCVQDPMASFRRGILEPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVSFLSKMIGKFPSWLKLVVTVRTSLQEIIKLLPFHRIFLDRLEENEAIDQDLQAYILHRIHSSSEIQNNISLNGKMDNTTFGKLSSHLKTLSQGSYLYLKLTFDLIEKGYLVLKSSSYKVVPVSLSEVYLLQCNMKFPTQSSFDRVMPLLNVAVASLHPLTDEHIFQAINAGNIEGTLEWDDFQQRMENLSMFLIKRRDMTRMFVHPSFREWLIWREEGEKTKFLCDPRSGHTLLAFWFSRQEGKLNRQQTIELGHHILKAHIFKGLSKKVGVSSSILQGLWISYSTEGLSMALASLRNLYTPNIKVSRLLILGGANVNYRTEVLNNAPILCVQSHLGYTEMVALLLEFGANVDAASESGLTPLGYAAAAGFLSIVVLLCKKRAKVDHLDKNGQCALVHAALRGHLEVVKFLIQCDWSMAGQQQGVFKKSHAIQQALIAAASMGYTEIVSYLLDLPEKDEEEVERAQINSFDSLWGETALTAAAGRGKLDVCRLLLEQGAAVAQPNRRGVVPLFSAVRQGHWQIVDLLLTHGADVNMADKQGRTPLMMAASEGHLGTVEFLLAQGASISLMDKEGLTALSWACLKGHLAVVRALVENGAATDHADKNGRTPLDLAAFYGDAEVVQFLVDHGAMIEHVDYSGMRPLDRAVGCRNTSVVVTLLKKGAKIGCQTLPSRPRGPATWAMATSKPDIMIILLSKLMEEGDMFYKKGKVKEAAQRYQYALKKFPREGFGEDLKTFRELKVSLLLNLSRCRRKMNDFGMAEEFATKALELKPKSYEAYYARARAKRSSSRQFAAALEDLNEAIKLCPNNREIQRLLLRVEEECRQVQQQQQQQQQPPPLPAEPEPEAQHEELYSVQDIFEEEYLEQDVENVSIGLQTESRPNQGLPIIQSPPPSPAHRDSAYISGSPLGSHQVFDFRSNSSVGSPTRQAYQSTSPTLSPTHQNSHYRPSPPHTSPAHQGSSYRFSPPPVGSQGKEYQSPPPSPLRRGPQYRASPPADGMSVYRSQSGSPVRYQQEPSAVSPLPGRPKSPLSKMSQRSFQMPQLPVAVPQQGLRLQPAKAQIVRSNQPSSAVHSSTVIPTGAYSQVAHSMASKYQAAAGEMGVNQSRLVYQGSIGGIVGDSRPVQHVQASLSAGAICQHGGLAKEDLPQRPSSAYRGGMRYSQTPQIGRSQSASYYPMCHSKLDLERSSMPSGQLGSPDVSHLIRRPISVNPSEIKPHPPTPRPLLHSQSVGLRFSPSSNSISSTSNLTPNFRPSASIQQMEIPLKPAYDRACDELSPVSPTQGGYPSEPARSRTTPFMGIIDKTARTQQYPHLHQQNRTWAVSSVDTVISPTSPGNLPQPESFSPPSSISNIAFYNKTNNAQNGHLLEEDYYSPHGMLANGSRGDLLERVTQASSYPDVKVARTLPVAQAYQDNLYRQLSRDSRQGQTSPIKPKRPFVESNV
SIO_010081: LOC100541791
subclass of: SO_0000673
so part of: LOC100541791
location: join(998952..999150,1006156..1006281,1012379..1012660,1015608..1015741,1025069..1025300,1027498..1027664,1028436..1029043,1039496..1039604,1042115..1042237,1042450..1042686,1044607..1044792,1045500..1045593,1049801..1049934,1050394..1050517,1053659..1053834,1054465..1054597,1055126..1055155,1055955..1056046,1057535..1057681,1060030..1060130,1062012..1063974)
location: region:998952-1063974:1
so has part: feature:998952-999150:1:exon
so has part: feature:1006156-1006281:1:exon
so has part: feature:1012379-1012660:1:exon
so has part: feature:1015608-1015741:1:exon
so has part: feature:1025069-1025300:1:exon
so has part: feature:1027498-1027664:1:exon
so has part: feature:1028436-1029043:1:exon
so has part: feature:1039496-1039604:1:exon
so has part: feature:1042115-1042237:1:exon
so has part: feature:1042450-1042686:1:exon
so has part: feature:1044607-1044792:1:exon
so has part: feature:1045500-1045593:1:exon
so has part: feature:1049801-1049934:1:exon
so has part: feature:1050394-1050517:1:exon
so has part: feature:1053659-1053834:1:exon
so has part: feature:1054465-1054597:1:exon
so has part: feature:1055126-1055155:1:exon
so has part: feature:1055955-1056046:1:exon
so has part: feature:1057535-1057681:1:exon
so has part: feature:1060030-1060130:1:exon
so has part: feature:1062012-1063974:1:exon

XP_019478934.1
type: Protein
SIO_000068: ncbiprotein

position:998952:1
position: 998952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063974:1
position: 1063974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998952-999150:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1006156-1006281:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1012379-1012660:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015608-1015741:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1025069-1025300:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1027498-1027664:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1028436-1029043:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1039496-1039604:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1042115-1042237:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1042450-1042686:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1044607-1044792:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1045500-1045593:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1049801-1049934:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1050394-1050517:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1053659-1053834:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1054465-1054597:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1055126-1055155:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1055955-1056046:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1057535-1057681:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1060030-1060130:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1062012-1063974:1:exon

LOC100541947
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100541947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1068945..1070715)
location: region:1068945-1070715:-1
so has part: feature:1068945-1070715:-1:exon
subclass of: SO_0000010

100541947
type: Gene
SIO_000068: ncbigene

position:1068945:-1
position: 1068945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070715:-1
position: 1070715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068945-1070715:-1:exon

LOC100541947
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100541947
product: cytochrome b561
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_003213031.3
SIO_010081: LOC100541947
subclass of: SO_0000673
so part of: LOC100541947
location: complement(join(1068945..1069574,1070152..1070309,1070391..1070494,1070562..1070715))
location: region:1068945-1070715:-1
so has part: feature:1070562-1070715:-1:exon
so has part: feature:1070391-1070494:-1:exon
so has part: feature:1070152-1070309:-1:exon
so has part: feature:1068945-1069574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1070562-1070715:-1:exon

position:1070562:-1
position: 1070562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1070391-1070494:-1:exon

position:1070391:-1
position: 1070391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070494:-1
position: 1070494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070152-1070309:-1:exon

position:1070152:-1
position: 1070152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070309:-1
position: 1070309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1068945-1069574:-1:exon

position:1069574:-1
position: 1069574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100541947
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100541947
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b561
translation: MDTAPLLTALSPSALLVYRVFRNEARRSTKALHALLHGLALLIALVGLVAVFESHRAKGISNMYSLHSWCGMAAFVLYLLQWLLGCGFFLVPGMSFSLRGRYKPHHVFFGIALFAFSIATCLLGITETLLFNIRDSYSHFVPEGVLANVLGLLLVAFGLVVGYVLTRDDWKRAPLAEEMALSMDFKTLTEGESPGGSQ
SIO_010081: LOC100541947
subclass of: SO_0000673
so part of: LOC100541947
location: complement(join(1069379..1069574,1070152..1070309,1070391..1070494,1070562..1070700))
location: region:1069379-1070700:-1
so has part: feature:1070562-1070700:-1:exon
so has part: feature:1070391-1070494:-1:exon
so has part: feature:1070152-1070309:-1:exon
so has part: feature:1069379-1069574:-1:exon

XP_003213079.3
type: Protein
SIO_000068: ncbiprotein

position:1069379:-1
position: 1069379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070700:-1
position: 1070700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070562-1070700:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070391-1070494:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1070152-1070309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1069379-1069574:-1:exon

LOC104914579
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1073880..1106250
location: region:1073880-1106250:1
so has part: feature:1073880-1106250:1:exon
subclass of: SO_0000010

104914579
type: Gene
SIO_000068: ncbigene

position:1073880:1
position: 1073880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106250:1
position: 1106250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073880-1106250:1:exon

LOC104914579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914579
product: protein TANC2-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_019623393.2
SIO_010081: LOC104914579
subclass of: SO_0000673
so part of: LOC104914579
location: join(1073880..1074360,1075953..1076021,1102003..1102151,1105803..1106250)
location: region:1073880-1106250:1
so has part: feature:1073880-1074360:1:exon
so has part: feature:1075953-1076021:1:exon
so has part: feature:1102003-1102151:1:exon
so has part: feature:1105803-1106250:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073880-1074360:1:exon

position:1074360:1
position: 1074360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075953-1076021:1:exon

position:1075953:1
position: 1075953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076021:1
position: 1076021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1102003-1102151:1:exon

position:1102003:1
position: 1102003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1102151:1
position: 1102151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1105803-1106250:1:exon

position:1105803:1
position: 1105803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104914579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914579
product: protein TANC2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019623392.2
SIO_010081: LOC104914579
subclass of: SO_0000673
so part of: LOC104914579
location: join(1073886..1074360,1075953..1076132,1102003..1102151,1105803..1106247)
location: region:1073886-1106247:1
so has part: feature:1073886-1074360:1:exon
so has part: feature:1075953-1076132:1:exon
so has part: feature:1102003-1102151:1:exon
so has part: feature:1105803-1106247:1:exon

position:1073886:1
position: 1073886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106247:1
position: 1106247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073886-1074360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075953-1076132:1:exon

position:1076132:1
position: 1076132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1102003-1102151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1105803-1106247:1:exon

LOC104914579
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104914579
product: protein TANC2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_019623391.2
SIO_010081: LOC104914579
subclass of: SO_0000673
so part of: LOC104914579
location: join(1073894..1074360,1075953..1076021,1090765..1090875,1102003..1102151,1105803..1106220)
location: region:1073894-1106220:1
so has part: feature:1073894-1074360:1:exon
so has part: feature:1075953-1076021:1:exon
so has part: feature:1090765-1090875:1:exon
so has part: feature:1102003-1102151:1:exon
so has part: feature:1105803-1106220:1:exon

position:1073894:1
position: 1073894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106220:1
position: 1106220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073894-1074360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075953-1076021:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090765-1090875:1:exon

position:1090765:1
position: 1090765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition