Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 26, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 26, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015036.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015036.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000987.2.\nOn Dec 18, 2014 this sequence version replaced NC_015036.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6432859
topology: linear
so has quality: SO_0000987
location: 1..6432859
location: region:1-6432859:1
RO_0002162: 9103

NC_015036
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6432859:1
position: 6432859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6432859:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 26
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

LOC104914338
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 13226..13901
location: region:13226-13901:1
so has part: feature:13226-13901:1:exon

104914338
type: Gene
SIO_000068: ncbigene

position:13226:1
position: 13226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13901:1
position: 13901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13226-13901:1:exon

LOC104914338
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104914338
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 14% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104914338
subclass of: SO_0000673
so part of: LOC104914338
location: 13226..13901
location: region:13226-13901:1
so has part: feature:13226-13901:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13226-13901:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 17093..17192
location: region:17093-17192:1
so has part: feature:17093-17192:1:region

position:17093:1
position: 17093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17192:1
position: 17192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17093-17192:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 25895..25994
location: region:25895-25994:1
so has part: feature:25895-25994:1:region

position:25895:1
position: 25895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25994:1
position: 25994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25895-25994:1:region

LOC116217449
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217449
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(26194..32054)
location: region:26194-32054:-1
so has part: feature:26194-32054:-1:exon
subclass of: SO_0000011

116217449
type: Gene
SIO_000068: ncbigene

position:26194:-1
position: 26194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32054:-1
position: 32054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26194-32054:-1:exon

LOC116217449
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217449
product: uncharacterized LOC116217449
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004161995.1
SIO_010081: LOC116217449
subclass of: SO_0000673
so part of: LOC116217449
location: complement(join(26194..27415,28698..28830,31600..32054))
location: region:26194-32054:-1
so has part: feature:31600-32054:-1:exon
so has part: feature:28698-28830:-1:exon
so has part: feature:26194-27415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31600-32054:-1:exon

position:31600:-1
position: 31600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:28698-28830:-1:exon

position:28698:-1
position: 28698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28830:-1
position: 28830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:26194-27415:-1:exon

position:27415:-1
position: 27415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C2CD2L
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(41148..64290)
location: region:41148-64290:-1
so has part: feature:41148-64290:-1:exon
subclass of: SO_0000010

100541627
type: Gene
SIO_000068: ncbigene

position:41148:-1
position: 41148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64290:-1
position: 64290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41148-64290:-1:exon

C2CD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: C2CD2L
product: C2CD2 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010723782.2
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(41148..43045,48910..49119,50884..51166,51650..51783,52424..52525,53193..53364,53657..53784,54323..54387,54856..54979,55131..55248,55674..55790,56642..56752,58486..58605,59064..59159,63963..64082,64237..64290))
location: region:41148-64290:-1
so has part: feature:64237-64290:-1:exon
so has part: feature:63963-64082:-1:exon
so has part: feature:59064-59159:-1:exon
so has part: feature:58486-58605:-1:exon
so has part: feature:56642-56752:-1:exon
so has part: feature:55674-55790:-1:exon
so has part: feature:55131-55248:-1:exon
so has part: feature:54856-54979:-1:exon
so has part: feature:54323-54387:-1:exon
so has part: feature:53657-53784:-1:exon
so has part: feature:53193-53364:-1:exon
so has part: feature:52424-52525:-1:exon
so has part: feature:51650-51783:-1:exon
so has part: feature:50884-51166:-1:exon
so has part: feature:48910-49119:-1:exon
so has part: feature:41148-43045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64237-64290:-1:exon

position:64237:-1
position: 64237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63963-64082:-1:exon

position:63963:-1
position: 63963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64082:-1
position: 64082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:59064-59159:-1:exon

position:59064:-1
position: 59064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59159:-1
position: 59159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:58486-58605:-1:exon

position:58486:-1
position: 58486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58605:-1
position: 58605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:56642-56752:-1:exon

position:56642:-1
position: 56642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56752:-1
position: 56752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:55674-55790:-1:exon

position:55674:-1
position: 55674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55790:-1
position: 55790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:55131-55248:-1:exon

position:55131:-1
position: 55131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55248:-1
position: 55248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:54856-54979:-1:exon

position:54856:-1
position: 54856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54979:-1
position: 54979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:54323-54387:-1:exon

position:54323:-1
position: 54323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54387:-1
position: 54387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:53657-53784:-1:exon

position:53657:-1
position: 53657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53784:-1
position: 53784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:53193-53364:-1:exon

position:53193:-1
position: 53193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53364:-1
position: 53364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:52424-52525:-1:exon

position:52424:-1
position: 52424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52525:-1
position: 52525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:51650-51783:-1:exon

position:51650:-1
position: 51650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51783:-1
position: 51783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:50884-51166:-1:exon

position:50884:-1
position: 50884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:51166:-1
position: 51166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:48910-49119:-1:exon

position:48910:-1
position: 48910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49119:-1
position: 49119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:41148-43045:-1:exon

position:43045:-1
position: 43045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C2CD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: C2CD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid transfer protein C2CD2L
translation: MGAQLLLPALLEEGDPGQAASRSSWQPATRLSGQKGWTRRLERKPCTRAPERKAENSESSVQITFEEGPQLPPAANISCVTCKGQSGHSMVLCCHLSAEAVKFPVSVTQQSAVAVSVDTYHVTLALLQAEVEIHLEEIQNQGLLVSWIFKDRPDLDLSVLPRLQPCEKNEGKADLSTIKDLIEDTIVSTQPAMMVNLKACTAGTGTVSSSKVTQESPYSVVEAPLGSKLLLRNLRVLNLGSQRSGGVGEICCVAELDNPPQQKWTRPVRAGSAGIAAEMEWNEELFLELGPRSKELKLQVLGNSSKGEAVLLAHATLLLDSLGKQPSGRQVCSLASGAGQALAAEATIVLELLYQDSSASLNAQHATSLHTSITPTKKVEMDRTIMPDGTIVTTVTTIQSRPKVDCKLDSPSRSPSKVEVTEKKTTVLLESSCPHNSLSSSSRGSQMPNGLDPVAETAIRQLTETNNKPAKKTPTKRSTLIISGVSKVPLAQDEMALSLGYAASMEATVYGDTGAVCASDQVHDSTESSQLLEASPSEQRASQELDETTRSDISERPSVEDVESETGSTGALETRSLKDHKVSFLRSGTKLIFRRRSKQKEAGLSQSHDDLSNVTASSATKKKAGSFSHRLIKRFSFKSKSKPKTGDNTTTAHGYGR
SIO_010081: C2CD2L
subclass of: SO_0000673
so part of: C2CD2L
location: complement(join(43026..43045,48910..49119,50884..51166,51650..51783,52424..52525,53193..53364,53657..53784,54323..54387,54856..54979,55131..55248,55674..55790,56642..56752,58486..58605,59064..59159,63963..64082,64237..64290))
location: region:43026-64290:-1
so has part: feature:64237-64290:-1:exon
so has part: feature:63963-64082:-1:exon
so has part: feature:59064-59159:-1:exon
so has part: feature:58486-58605:-1:exon
so has part: feature:56642-56752:-1:exon
so has part: feature:55674-55790:-1:exon
so has part: feature:55131-55248:-1:exon
so has part: feature:54856-54979:-1:exon
so has part: feature:54323-54387:-1:exon
so has part: feature:53657-53784:-1:exon
so has part: feature:53193-53364:-1:exon
so has part: feature:52424-52525:-1:exon
so has part: feature:51650-51783:-1:exon
so has part: feature:50884-51166:-1:exon
so has part: feature:48910-49119:-1:exon
so has part: feature:43026-43045:-1:exon

XP_010722084.1
type: Protein
SIO_000068: ncbiprotein

position:43026:-1
position: 43026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64237-64290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63963-64082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:59064-59159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:58486-58605:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:56642-56752:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:55674-55790:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:55131-55248:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:54856-54979:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:54323-54387:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:53657-53784:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:53193-53364:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:52424-52525:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:51650-51783:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:50884-51166:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:48910-49119:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:43026-43045:-1:exon

DPAGT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DPAGT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 63921..70385
location: region:63921-70385:1
so has part: feature:63921-70385:1:exon
subclass of: SO_0000010

100541475
type: Gene
SIO_000068: ncbigene

position:63921:1
position: 63921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:70385:1
position: 70385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63921-70385:1:exon

DPAGT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DPAGT1
product: dolichyl-phosphate N-acetylglucosaminephosphotransferase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_003211380.4
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(63921..65607,65683..65803,65888..66101,66660..66806,66929..67013,67273..67460,68069..68156,68505..68660,69822..70385)
location: region:63921-70385:1
so has part: feature:63921-65607:1:exon
so has part: feature:65683-65803:1:exon
so has part: feature:65888-66101:1:exon
so has part: feature:66660-66806:1:exon
so has part: feature:66929-67013:1:exon
so has part: feature:67273-67460:1:exon
so has part: feature:68069-68156:1:exon
so has part: feature:68505-68660:1:exon
so has part: feature:69822-70385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63921-65607:1:exon

position:65607:1
position: 65607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65683-65803:1:exon

position:65683:1
position: 65683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65803:1
position: 65803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:65888-66101:1:exon

position:65888:1
position: 65888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66101:1
position: 66101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:66660-66806:1:exon

position:66660:1
position: 66660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66806:1
position: 66806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:66929-67013:1:exon

position:66929:1
position: 66929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67013:1
position: 67013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:67273-67460:1:exon

position:67273:1
position: 67273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67460:1
position: 67460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:68069-68156:1:exon

position:68069:1
position: 68069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68156:1
position: 68156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:68505-68660:1:exon

position:68505:1
position: 68505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:68660:1
position: 68660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:69822-70385:1:exon

position:69822:1
position: 69822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPAGT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DPAGT1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase
translation: MVTSGATPSPQGSFQRRRPPGPHTESPCIVSRRRPCSGALPLSAVAVHRATKHIKTSGLGREALGTGAAARNAKATRALVTDYQTARAALSGLTRLPQGVGREEGESDVCDGGTEIAPAHCQDQRWRSPHGLSGKGARVSGASYSSAQPARCAERRSVPLSGPASAAAMAAWPAAPLLINLGGSLLGFVATLTLIPAFKDHFLAARLVGEDLNKAFRRPIPEAQGMISGAVFLIILFCFIPVPFLRCFIEEQCTAFPHDEFVELIGSLLAICCMIFLGFADDVLNLRWRHKLLLPTMASLPLLMVYFTNFGNTTIVVPKPFRVLLGMHLDLGILYYAYMGMLAVFCTNAINILAGINGIEAGQSLVIAGSIITFNLVELNGDYQDDHIFSLYFMIPFFFTTLGLFYHNWYPSQVFVGDTFCYFAGMTFAVVGILGHFSKTMLXFFIPQVLNFLYSLPQLFHIIPCPRHRLPRLNPTTGKLEMSYSKFKTKSLSTLGTYILKVVKILHIVDVRSGMDEDGEYSECNNMTLINFVIKLIGPIHERNLTLLLLLIQVLGSMIAFSIRYQLVRLFYDV
SIO_010081: DPAGT1
subclass of: SO_0000673
so part of: DPAGT1
location: join(64949..65607,65683..65803,65888..66101,66660..66806,66929..67013,67273..67460,68069..68156,68505..68660,69822..69887)
location: region:64949-69887:1
so has part: feature:64949-65607:1:exon
so has part: feature:65683-65803:1:exon
so has part: feature:65888-66101:1:exon
so has part: feature:66660-66806:1:exon
so has part: feature:66929-67013:1:exon
so has part: feature:67273-67460:1:exon
so has part: feature:68069-68156:1:exon
so has part: feature:68505-68660:1:exon
so has part: feature:69822-69887:1:exon

XP_003211428.2
type: Protein
SIO_000068: ncbiprotein

position:64949:1
position: 64949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:69887:1
position: 69887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64949-65607:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65683-65803:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:65888-66101:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66660-66806:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66929-67013:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67273-67460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:68069-68156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:68505-68660:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:69822-69887:1:exon

LOC100541781
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100541781
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 70510..71950
location: region:70510-71950:1
so has part: feature:70510-71950:1:exon
subclass of: SO_0000010

100541781
type: Gene
SIO_000068: ncbigene

position:70510:1
position: 70510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71950:1
position: 71950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70510-71950:1:exon

LOC100541781
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100541781
product: histone H2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010723545.3
SIO_010081: LOC100541781
subclass of: SO_0000673
so part of: LOC100541781
location: 70510..71950
location: region:70510-71950:1
so has part: feature:70510-71950:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70510-71950:1:exon

LOC100541781
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100541781
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone H2A
translation: MSGRGKSGGKARAKAKSRSSRAGLQFPVGRVHRLLRRGHYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGGSAASPAKAGKKGGGQQSQEY
SIO_010081: LOC100541781
subclass of: SO_0000673
so part of: LOC100541781
location: 71137..71568
location: region:71137-71568:1
so has part: feature:71137-71568:1:exon

XP_010721847.1
type: Protein
SIO_000068: ncbiprotein

position:71137:1
position: 71137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:71568:1
position: 71568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:71137-71568:1:exon

HMBS
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(72557..82681)
location: region:72557-82681:-1
so has part: feature:72557-82681:-1:exon
subclass of: SO_0000010

100541937
type: Gene
SIO_000068: ncbigene

position:72557:-1
position: 72557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82681:-1
position: 82681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72557-82681:-1:exon

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HMBS
product: hydroxymethylbilane synthase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010723546.3
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(72557..72881,73775..73861,74329..74382,74614..74733,75933..75971,76445..76558,77220..77295,78347..78424,78726..78803,79830..79885,80006..80055,80577..80649,82343..82396,82560..82681))
location: region:72557-82681:-1
so has part: feature:82560-82681:-1:exon
so has part: feature:82343-82396:-1:exon
so has part: feature:80577-80649:-1:exon
so has part: feature:80006-80055:-1:exon
so has part: feature:79830-79885:-1:exon
so has part: feature:78726-78803:-1:exon
so has part: feature:78347-78424:-1:exon
so has part: feature:77220-77295:-1:exon
so has part: feature:76445-76558:-1:exon
so has part: feature:75933-75971:-1:exon
so has part: feature:74614-74733:-1:exon
so has part: feature:74329-74382:-1:exon
so has part: feature:73775-73861:-1:exon
so has part: feature:72557-72881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82560-82681:-1:exon

position:82560:-1
position: 82560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82343-82396:-1:exon

position:82343:-1
position: 82343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82396:-1
position: 82396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80577-80649:-1:exon

position:80577:-1
position: 80577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80649:-1
position: 80649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:80006-80055:-1:exon

position:80006:-1
position: 80006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80055:-1
position: 80055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:79830-79885:-1:exon

position:79830:-1
position: 79830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79885:-1
position: 79885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:78726-78803:-1:exon

position:78726:-1
position: 78726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78803:-1
position: 78803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:78347-78424:-1:exon

position:78347:-1
position: 78347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78424:-1
position: 78424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:77220-77295:-1:exon

position:77220:-1
position: 77220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77295:-1
position: 77295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:76445-76558:-1:exon

position:76445:-1
position: 76445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76558:-1
position: 76558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:75933-75971:-1:exon

position:75933:-1
position: 75933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75971:-1
position: 75971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:74614-74733:-1:exon

position:74614:-1
position: 74614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74733:-1
position: 74733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:74329-74382:-1:exon

position:74329:-1
position: 74329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74382:-1
position: 74382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:73775-73861:-1:exon

position:73775:-1
position: 73775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73861:-1
position: 73861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:72557-72881:-1:exon

position:72881:-1
position: 72881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HMBS
product: hydroxymethylbilane synthase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_019622916.2
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(72557..72881,73775..73861,74329..74382,74614..74733,75933..75971,76445..76558,77220..77295,78347..78424,78726..78803,79830..79885,80006..80055,80577..80649,82560..82604))
location: region:72557-82604:-1
so has part: feature:82560-82604:-1:exon
so has part: feature:80577-80649:-1:exon
so has part: feature:80006-80055:-1:exon
so has part: feature:79830-79885:-1:exon
so has part: feature:78726-78803:-1:exon
so has part: feature:78347-78424:-1:exon
so has part: feature:77220-77295:-1:exon
so has part: feature:76445-76558:-1:exon
so has part: feature:75933-75971:-1:exon
so has part: feature:74614-74733:-1:exon
so has part: feature:74329-74382:-1:exon
so has part: feature:73775-73861:-1:exon
so has part: feature:72557-72881:-1:exon

position:82604:-1
position: 82604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82560-82604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80577-80649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80006-80055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79830-79885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78726-78803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78347-78424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77220-77295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76445-76558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75933-75971:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:74614-74733:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:74329-74382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:73775-73861:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:72557-72881:-1:exon

HMBS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HMBS
product: hydroxymethylbilane synthase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_010723547.3
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(72557..72881,73775..73861,74329..74382,74614..74733,75933..75971,76445..76558,77220..77295,78347..78424,78726..78803,79830..79885,80006..80055,80577..80649,81854..81946,82343..82360))
location: region:72557-82360:-1
so has part: feature:82343-82360:-1:exon
so has part: feature:81854-81946:-1:exon
so has part: feature:80577-80649:-1:exon
so has part: feature:80006-80055:-1:exon
so has part: feature:79830-79885:-1:exon
so has part: feature:78726-78803:-1:exon
so has part: feature:78347-78424:-1:exon
so has part: feature:77220-77295:-1:exon
so has part: feature:76445-76558:-1:exon
so has part: feature:75933-75971:-1:exon
so has part: feature:74614-74733:-1:exon
so has part: feature:74329-74382:-1:exon
so has part: feature:73775-73861:-1:exon
so has part: feature:72557-72881:-1:exon

position:82360:-1
position: 82360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82343-82360:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:81854-81946:-1:exon

position:81854:-1
position: 81854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81946:-1
position: 81946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:80577-80649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80006-80055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79830-79885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78726-78803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78347-78424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77220-77295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76445-76558:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75933-75971:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:74614-74733:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:74329-74382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:73775-73861:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:72557-72881:-1:exon

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase isoform X2
translation: MAEVRPAALARIQTDSVVEMLREFYPDLCFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSVLHDGETVLCCIAERAFMKHLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSDSLKETMQASVNYPQRNEDGPNDDVQHVGITAKNVSGQAQEAAENLGIELASLLLSKGAKHILRVARQLNDAC
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(72708..72881,73775..73861,74329..74382,74614..74733,75933..75971,76445..76558,77220..77295,78347..78424,78726..78803,79830..79885,80006..80055,80577..80649,82560..82583))
location: region:72708-82583:-1
so has part: feature:82560-82583:-1:exon
so has part: feature:80577-80649:-1:exon
so has part: feature:80006-80055:-1:exon
so has part: feature:79830-79885:-1:exon
so has part: feature:78726-78803:-1:exon
so has part: feature:78347-78424:-1:exon
so has part: feature:77220-77295:-1:exon
so has part: feature:76445-76558:-1:exon
so has part: feature:75933-75971:-1:exon
so has part: feature:74614-74733:-1:exon
so has part: feature:74329-74382:-1:exon
so has part: feature:73775-73861:-1:exon
so has part: feature:72708-72881:-1:exon

XP_019478461.1
type: Protein
SIO_000068: ncbiprotein

position:72708:-1
position: 72708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82583:-1
position: 82583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82560-82583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80577-80649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80006-80055:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:79830-79885:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78726-78803:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78347-78424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77220-77295:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:76445-76558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:75933-75971:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:74614-74733:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:74329-74382:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:73775-73861:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:72708-72881:-1:exon

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase isoform X1
translation: MAEVRPAAGENGIGNRAIRVGTRRSQLARIQTDSVVEMLREFYPDLCFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSVLHDGETVLCCIAERAFMKHLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSDSLKETMQASVNYPQRNEDGPNDDVQHVGITAKNVSGQAQEAAENLGIELASLLLSKGAKHILRVARQLNDAC
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(72708..72881,73775..73861,74329..74382,74614..74733,75933..75971,76445..76558,77220..77295,78347..78424,78726..78803,79830..79885,80006..80055,80577..80649,82343..82396,82560..82583))
location: region:72708-82583:-1
so has part: feature:82560-82583:-1:exon
so has part: feature:82343-82396:-1:exon
so has part: feature:80577-80649:-1:exon
so has part: feature:80006-80055:-1:exon
so has part: feature:79830-79885:-1:exon
so has part: feature:78726-78803:-1:exon
so has part: feature:78347-78424:-1:exon
so has part: feature:77220-77295:-1:exon
so has part: feature:76445-76558:-1:exon
so has part: feature:75933-75971:-1:exon
so has part: feature:74614-74733:-1:exon
so has part: feature:74329-74382:-1:exon
so has part: feature:73775-73861:-1:exon
so has part: feature:72708-72881:-1:exon

XP_010721848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:82560-82583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82343-82396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:80577-80649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:80006-80055:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:79830-79885:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78726-78803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:78347-78424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77220-77295:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:76445-76558:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:75933-75971:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:74614-74733:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:74329-74382:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:73775-73861:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:72708-72881:-1:exon

HMBS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HMBS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: porphobilinogen deaminase isoform X3
translation: MLREFYPDLCFEIVAMSTTGDKILDTALSKIGEKSLFTKELENALERNEVDLVVHSLKDLPTSLPPGFTIGAICKRENPLDAVVFHPKNCGKTLSLLPEKSVIGTSSLRRAAQLKKKFPQLEFRDIRGNLNTRLKKLDEKEDFSAIILAAAGLKRMGWENRIGQLLSPEDCLYAVGQGALAVEVRAKDQETLNMVSVLHDGETVLCCIAERAFMKHLEGGCSVPVAVNTMLKDGQLYLTGAVYSLDGSDSLKETMQASVNYPQRNEDGPNDDVQHVGITAKNVSGQAQEAAENLGIELASLLLSKGAKHILRVARQLNDAC
SIO_010081: HMBS
subclass of: SO_0000673
so part of: HMBS
location: complement(join(72708..72881,73775..73861,74329..74382,74614..74733,75933..75971,76445..76558,77220..77295,78347..78424,78726..78803,79830..79885,80006..80055,80577..80616))
location: region:72708-80616:-1
so has part: feature:80577-80616:-1:exon
so has part: feature:80006-80055:-1:exon
so has part: feature:79830-79885:-1:exon
so has part: feature:78726-78803:-1:exon
so has part: feature:78347-78424:-1:exon
so has part: feature:77220-77295:-1:exon
so has part: feature:76445-76558:-1:exon
so has part: feature:75933-75971:-1:exon
so has part: feature:74614-74733:-1:exon
so has part: feature:74329-74382:-1:exon
so has part: feature:73775-73861:-1:exon
so has part: feature:72708-72881:-1:exon

XP_010721849.1
type: Protein
SIO_000068: ncbiprotein

position:80616:-1
position: 80616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80577-80616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:80006-80055:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79830-79885:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78726-78803:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78347-78424:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:77220-77295:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:76445-76558:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:75933-75971:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:74614-74733:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:74329-74382:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:73775-73861:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:72708-72881:-1:exon

VPS11
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(82818..90557)
location: region:82818-90557:-1
so has part: feature:82818-90557:-1:exon
subclass of: SO_0000010

104914379
type: Gene
SIO_000068: ncbigene

position:82818:-1
position: 82818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90557:-1
position: 90557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82818-90557:-1:exon

VPS11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: VPS11
product: VPS11 core subunit of CORVET and HOPS complexes
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019622903.2
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(82818..83101,84023..84245,84348..84519,85071..85273,85578..85717,86156..86317,86607..86834,88056..88355,88455..88618,89578..89713,89827..89975,90372..90557))
location: region:82818-90557:-1
so has part: feature:90372-90557:-1:exon
so has part: feature:89827-89975:-1:exon
so has part: feature:89578-89713:-1:exon
so has part: feature:88455-88618:-1:exon
so has part: feature:88056-88355:-1:exon
so has part: feature:86607-86834:-1:exon
so has part: feature:86156-86317:-1:exon
so has part: feature:85578-85717:-1:exon
so has part: feature:85071-85273:-1:exon
so has part: feature:84348-84519:-1:exon
so has part: feature:84023-84245:-1:exon
so has part: feature:82818-83101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90372-90557:-1:exon

position:90372:-1
position: 90372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89827-89975:-1:exon

position:89827:-1
position: 89827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89975:-1
position: 89975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89578-89713:-1:exon

position:89578:-1
position: 89578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89713:-1
position: 89713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88455-88618:-1:exon

position:88455:-1
position: 88455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88618:-1
position: 88618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:88056-88355:-1:exon

position:88056:-1
position: 88056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88355:-1
position: 88355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:86607-86834:-1:exon

position:86607:-1
position: 86607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86834:-1
position: 86834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:86156-86317:-1:exon

position:86156:-1
position: 86156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86317:-1
position: 86317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:85578-85717:-1:exon

position:85578:-1
position: 85578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85717:-1
position: 85717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:85071-85273:-1:exon

position:85071:-1
position: 85071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85273:-1
position: 85273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:84348-84519:-1:exon

position:84348:-1
position: 84348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84519:-1
position: 84519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:84023-84245:-1:exon

position:84023:-1
position: 84023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84245:-1
position: 84245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:82818-83101:-1:exon

position:83101:-1
position: 83101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VPS11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: VPS11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vacuolar protein sorting-associated protein 11 homolog
translation: MAAYLQWRRFVFFDREMVKEPPGPEAAGGKPFALPPGITVCDSGRGNLVFGDMEGRIWFLPRSLQLSGFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDGGNPLCTRIFPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTGLAFRQSGKTTHLFVVTTENIQSYLLSVKDYSHLELDNHGCGLHCSSLSDPSQDLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKYVSLEQLHFLFNRCSFWRLMSCDPYWLPLQNYQEALHYIGKLPFDQAESNMKRYGKILMHHVPKETTELLKNLCTDYQPSGNSEGPGILEGKKANSEEFIPVFANNSRELKAFLEHMTEVQSDSPQGVYDTLLELRLQNWAHEVDKQIKEKLHDEALTLLKSGRFKTVFDKALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEEDCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSCQIEQDGQRIQKYRDETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTLITDLPLGKSATTIEAGLQRELLMHTKRST
SIO_010081: VPS11
subclass of: SO_0000673
so part of: VPS11
location: complement(join(82937..83101,84023..84245,84348..84519,85071..85273,85578..85717,86156..86317,86607..86834,88056..88355,88455..88618,89578..89713,89827..89975,90372..90525))
location: region:82937-90525:-1
so has part: feature:90372-90525:-1:exon
so has part: feature:89827-89975:-1:exon
so has part: feature:89578-89713:-1:exon
so has part: feature:88455-88618:-1:exon
so has part: feature:88056-88355:-1:exon
so has part: feature:86607-86834:-1:exon
so has part: feature:86156-86317:-1:exon
so has part: feature:85578-85717:-1:exon
so has part: feature:85071-85273:-1:exon
so has part: feature:84348-84519:-1:exon
so has part: feature:84023-84245:-1:exon
so has part: feature:82937-83101:-1:exon

XP_019478448.1
type: Protein
SIO_000068: ncbiprotein

position:82937:-1
position: 82937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90525:-1
position: 90525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90372-90525:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89827-89975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89578-89713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88455-88618:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:88056-88355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:86607-86834:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:86156-86317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:85578-85717:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:85071-85273:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:84348-84519:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:84023-84245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:82937-83101:-1:exon

SIK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SIK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 98497..138237
location: region:98497-138237:1
so has part: feature:98497-138237:1:exon
subclass of: SO_0000010

100542921
type: Gene
SIO_000068: ncbigene

position:98497:1
position: 98497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138237:1
position: 138237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98497-138237:1:exon

SIK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SIK2
product: salt inducible kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019622904.1
SIO_010081: SIK2
subclass of: SO_0000673
so part of: SIK2
location: join(98497..98552,98676..98886,99665..99728,106217..106378,117400..117524,119073..119196,122079..122299,123640..123792,125904..126068,129832..130060,130612..130878,131013..131176,132181..132294,132921..133012,134461..138237)
location: region:98497-138237:1
so has part: feature:98497-98552:1:exon
so has part: feature:98676-98886:1:exon
so has part: feature:99665-99728:1:exon
so has part: feature:106217-106378:1:exon
so has part: feature:117400-117524:1:exon
so has part: feature:119073-119196:1:exon
so has part: feature:122079-122299:1:exon
so has part: feature:123640-123792:1:exon
so has part: feature:125904-126068:1:exon
so has part: feature:129832-130060:1:exon
so has part: feature:130612-130878:1:exon
so has part: feature:131013-131176:1:exon
so has part: feature:132181-132294:1:exon
so has part: feature:132921-133012:1:exon
so has part: feature:134461-138237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:98497-98552:1:exon

position:98552:1
position: 98552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:98676-98886:1:exon

position:98676:1
position: 98676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98886:1
position: 98886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:99665-99728:1:exon

position:99665:1
position: 99665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99728:1
position: 99728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:106217-106378:1:exon

position:106217:1
position: 106217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:106378:1
position: 106378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:117400-117524:1:exon

position:117400:1
position: 117400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117524:1
position: 117524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:119073-119196:1:exon

position:119073:1
position: 119073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:119196:1
position: 119196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:122079-122299:1:exon

position:122079:1
position: 122079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:122299:1
position: 122299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:123640-123792:1:exon

position:123640:1
position: 123640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123792:1
position: 123792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:125904-126068:1:exon

position:125904:1
position: 125904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:126068:1
position: 126068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:129832-130060:1:exon

position:129832:1
position: 129832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130060:1
position: 130060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:130612-130878:1:exon

position:130612:1
position: 130612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130878:1
position: 130878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:131013-131176:1:exon

position:131013:1
position: 131013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131176:1
position: 131176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:132181-132294:1:exon

position:132181:1
position: 132181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132294:1
position: 132294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:132921-133012:1:exon

position:132921:1
position: 132921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133012:1
position: 133012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:134461-138237:1:exon

position:134461:1
position: 134461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SIK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase SIK2
translation: MSRLCVEPMLSLFQYPFWRKKLPSIWDCGIYNEDKGVRGSSNLSIAFWLQVAIKIIDKSQLDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEFAKNGEIFDYLASHGRLSESEARRKFWQILSAVEYCHNQKVVHRDLKAENLLLDNNMNIKIADFGFGNFYKSGEPLTTWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQRVLEGRFRIPYFMSEDCEHLIRRMLVLDPSKRLTIAQIKEHKWMLIEVPAQRSVLYAPGQENQPSIGEYNEQVLRLMHSLGIDQQKTIESLQNKSYNHFAAIYYLLVERLKSHRSSFPVEQRFDARQRRPSTIAEQTVAKAQAVVPSVNLCSENTRLLRSPGLPPTSGAEVFSFPPSNCQTETAFMEEERVNTPKVNGCLLDPVPPMVIRKGCQSLPTSVMETSIDEGIETEGEAEDDPAQAFAALQAARSGKRRHTLAEVTDQLVVVPGTGKVYSLDENSSLGSSIESEYDMGSVQRNVGLLGDAPPLKDVVQLAAPFLGLRPTNPAMQALASQKRETHNRSPVSFREGRRASDTSLTQGIVAFRQHLQNLARTKGILELNKVQLLYEQMRSEEEPLLPSAAPQLQDLATNSAQEERPQQQEAAATFPSGAHTPVLSRRQSLEAQYLQHRLQKPTLLSKVPNTCQLYCKELPRSLEQQLQEHRLHQKRLFLQKQSQLQAYFNQMQIAESSYPRSSQMPLSCQEEQQPSAQQQSTQFSLQQTLSPVMEPSSEQMQYDLFLSHYQKVQLDPPPLSPLTSSSQLSSPIQVQQPPQSLQYSYQTCELPVVPSSEPDYSDQCQYSMDPAQQSSVALPDSQGCLAAQEPQSNYDALTLSELPGLFDCEMMETVDPQHSGYVLVN
SIO_010081: SIK2
subclass of: SO_0000673
so part of: SIK2
location: join(98497..98552,98676..98886,99665..99728,106217..106378,117400..117524,119073..119196,122079..122299,123640..123792,125904..126068,129832..130060,130612..130878,131013..131176,132181..132294,132921..133012,134461..135049)
location: region:98497-135049:1
so has part: feature:98497-98552:1:exon
so has part: feature:98676-98886:1:exon
so has part: feature:99665-99728:1:exon
so has part: feature:106217-106378:1:exon
so has part: feature:117400-117524:1:exon
so has part: feature:119073-119196:1:exon
so has part: feature:122079-122299:1:exon
so has part: feature:123640-123792:1:exon
so has part: feature:125904-126068:1:exon
so has part: feature:129832-130060:1:exon
so has part: feature:130612-130878:1:exon
so has part: feature:131013-131176:1:exon
so has part: feature:132181-132294:1:exon
so has part: feature:132921-133012:1:exon
so has part: feature:134461-135049:1:exon

XP_019478449.1
type: Protein
SIO_000068: ncbiprotein

position:135049:1
position: 135049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98497-98552:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:98676-98886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:99665-99728:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:106217-106378:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:117400-117524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:119073-119196:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:122079-122299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:123640-123792:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:125904-126068:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129832-130060:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:130612-130878:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:131013-131176:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:132181-132294:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:132921-133012:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:134461-135049:1:exon

FEZ1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FEZ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 171060..180894
location: region:171060-180894:1
so has part: feature:171060-180894:1:exon
subclass of: SO_0000010

100542765
type: Gene
SIO_000068: ncbigene

position:171060:1
position: 171060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180894:1
position: 180894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:171060-180894:1:exon

FEZ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FEZ1
product: fasciculation and elongation protein zeta 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 164 samples with support for all annotated introns
transcript id: XM_019622917.1
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(171060..171165,172819..173119,174881..174977,176298..176384,176585..176795,178034..178304,178634..178714,179040..179115,179810..179875,180734..180894)
location: region:171060-180894:1
so has part: feature:171060-171165:1:exon
so has part: feature:172819-173119:1:exon
so has part: feature:174881-174977:1:exon
so has part: feature:176298-176384:1:exon
so has part: feature:176585-176795:1:exon
so has part: feature:178034-178304:1:exon
so has part: feature:178634-178714:1:exon
so has part: feature:179040-179115:1:exon
so has part: feature:179810-179875:1:exon
so has part: feature:180734-180894:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:171060-171165:1:exon

position:171165:1
position: 171165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172819-173119:1:exon

position:172819:1
position: 172819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173119:1
position: 173119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:174881-174977:1:exon

position:174881:1
position: 174881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174977:1
position: 174977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:176298-176384:1:exon

position:176298:1
position: 176298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176384:1
position: 176384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:176585-176795:1:exon

position:176585:1
position: 176585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176795:1
position: 176795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:178034-178304:1:exon

position:178034:1
position: 178034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178304:1
position: 178304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:178634-178714:1:exon

position:178634:1
position: 178634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178714:1
position: 178714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:179040-179115:1:exon

position:179040:1
position: 179040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179115:1
position: 179115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:179810-179875:1:exon

position:179810:1
position: 179810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:179875:1
position: 179875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:180734-180894:1:exon

position:180734:1
position: 180734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FEZ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FEZ1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: fasciculation and elongation protein zeta-1
translation: MEAPLVSLEEEFEEGPGDNGGAPQRTMDPALAELESFSTEMMSFKSMEDLVQEFDEKLTVCFRNYDATTEGLAPVRGRLQAQEEEEHLQDEEVWDALTDGFVPRGSPQPWMHPEAEAPDGTDPQLCEKEDEELAERSEHDSGINEEPLLTAEQVIEELEELMQSSPDPEADPEGDEDEEEEEDEEEDAEVNAEGDGGGRGMEPIVLRELHTFSPTFNNNCSHEGLEQLTAGELAAAAGRAEAASRALSAELVAQLARRDELAFEKEVKTAFIGALLAVQGEQREQREAARRRRRDRGLSLQGGRPERXGHMPRKRFSMEGISSILQSGLRQTFGPAANEKQYLNTVIPYEKKGSPPSVEDLQMLTNILFAMKEGNEKVPTLLTDYILKVLCPT
SIO_010081: FEZ1
subclass of: SO_0000673
so part of: FEZ1
location: join(172845..173119,174881..174977,176298..176384,176585..176795,178034..178304,178634..178714,179040..179115,179810..179875,180734..180750)
location: region:172845-180750:1
so has part: feature:172845-173119:1:exon
so has part: feature:174881-174977:1:exon
so has part: feature:176298-176384:1:exon
so has part: feature:176585-176795:1:exon
so has part: feature:178034-178304:1:exon
so has part: feature:178634-178714:1:exon
so has part: feature:179040-179115:1:exon
so has part: feature:179810-179875:1:exon
so has part: feature:180734-180750:1:exon

XP_019478462.1
type: Protein
SIO_000068: ncbiprotein

position:172845:1
position: 172845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180750:1
position: 180750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172845-173119:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174881-174977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:176298-176384:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:176585-176795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:178034-178304:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:178634-178714:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:179040-179115:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:179810-179875:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:180734-180750:1:exon

PKNOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PKNOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(183043..247192)
location: region:183043-247192:-1
so has part: feature:183043-247192:-1:exon
subclass of: SO_0000010

100541992
type: Gene
SIO_000068: ncbigene

position:183043:-1
position: 183043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:247192:-1
position: 247192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183043-247192:-1:exon

PKNOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PKNOX2
product: PBX/knotted 1 homeobox 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010723550.3
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(183043..184625,185024..185202,185722..185798,187106..187225,189022..189119,189190..189321,193888..194076,196509..196680,200359..200495,204654..204762,210842..210920,211250..211401,245821..245941,246549..247192))
location: region:183043-247192:-1
so has part: feature:246549-247192:-1:exon
so has part: feature:245821-245941:-1:exon
so has part: feature:211250-211401:-1:exon
so has part: feature:210842-210920:-1:exon
so has part: feature:204654-204762:-1:exon
so has part: feature:200359-200495:-1:exon
so has part: feature:196509-196680:-1:exon
so has part: feature:193888-194076:-1:exon
so has part: feature:189190-189321:-1:exon
so has part: feature:189022-189119:-1:exon
so has part: feature:187106-187225:-1:exon
so has part: feature:185722-185798:-1:exon
so has part: feature:185024-185202:-1:exon
so has part: feature:183043-184625:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:246549-247192:-1:exon

position:246549:-1
position: 246549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:245821-245941:-1:exon

position:245821:-1
position: 245821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245941:-1
position: 245941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:211250-211401:-1:exon

position:211250:-1
position: 211250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:211401:-1
position: 211401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:210842-210920:-1:exon

position:210842:-1
position: 210842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:210920:-1
position: 210920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:204654-204762:-1:exon

position:204654:-1
position: 204654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204762:-1
position: 204762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:200359-200495:-1:exon

position:200359:-1
position: 200359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200495:-1
position: 200495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:196509-196680:-1:exon

position:196509:-1
position: 196509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196680:-1
position: 196680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:193888-194076:-1:exon

position:193888:-1
position: 193888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194076:-1
position: 194076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:189190-189321:-1:exon

position:189190:-1
position: 189190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189321:-1
position: 189321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:189022-189119:-1:exon

position:189022:-1
position: 189022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189119:-1
position: 189119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:187106-187225:-1:exon

position:187106:-1
position: 187106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187225:-1
position: 187225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:185722-185798:-1:exon

position:185722:-1
position: 185722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185798:-1
position: 185798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:185024-185202:-1:exon

position:185024:-1
position: 185024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185202:-1
position: 185202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:183043-184625:-1:exon

position:184625:-1
position: 184625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PKNOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PKNOX2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: homeobox protein PKNOX2
translation: MHHVSPAPALTMMATQTVPPPPYQDSPQMTATAQQPSKAQPVHLSAAPAPTAAVPPAAGDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNPSSISLHPQEMLQSSPAALPAASNXPPGIVVPAAALPPGNLAMGSGAGSPAVPGGALYQPVTMVTSQGQVLAQAIAPGALQIPNAQVNLDLTSLLDGEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGNSGTNPDGSLAMDNLQPLSSATATMAMQQAMLAAHEDSLDGTEEDDDEEDEDEMEEEEEEEEELEEEPGGLPTAPGANLGLDHSDSLE
SIO_010081: PKNOX2
subclass of: SO_0000673
so part of: PKNOX2
location: complement(join(184381..184625,185024..185202,185722..185798,187106..187225,189022..189119,189190..189321,193888..194076,196509..196680,200359..200495,204654..204737))
location: region:184381-204737:-1
so has part: feature:204654-204737:-1:exon
so has part: feature:200359-200495:-1:exon
so has part: feature:196509-196680:-1:exon
so has part: feature:193888-194076:-1:exon
so has part: feature:189190-189321:-1:exon
so has part: feature:189022-189119:-1:exon
so has part: feature:187106-187225:-1:exon
so has part: feature:185722-185798:-1:exon
so has part: feature:185024-185202:-1:exon
so has part: feature:184381-184625:-1:exon

XP_010721852.2
type: Protein
SIO_000068: ncbiprotein

position:184381:-1
position: 184381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204737:-1
position: 204737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:204654-204737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:200359-200495:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:196509-196680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193888-194076:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:189190-189321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:189022-189119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187106-187225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:185722-185798:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:185024-185202:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:184381-184625:-1:exon

SLC37A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(258768..>263453)
location: region:258768-263453:-1
so has part: feature:258768-263453:-1:exon
subclass of: SO_0000010

100543075
type: Gene
SIO_000068: ncbigene

position:258768:-1
position: 258768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263453:-1
position: 263453
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258768-263453:-1:exon

SLC37A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC37A2
product: solute carrier family 37 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_031556853.1
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(258768..258942,259024..259088,259211..259308,259409..259487,259778..259851,260176..260224,260573..260658,261011..261073,261158..261248,261329..261448,261690..261727,262040..262206,262278..262354,262525..262660,262747..262825,263129..263216,263319..>263453))
location: region:258768-263453:-1
so has part: feature:263319-263453:-1:exon
so has part: feature:263129-263216:-1:exon
so has part: feature:262747-262825:-1:exon
so has part: feature:262525-262660:-1:exon
so has part: feature:262278-262354:-1:exon
so has part: feature:262040-262206:-1:exon
so has part: feature:261690-261727:-1:exon
so has part: feature:261329-261448:-1:exon
so has part: feature:261158-261248:-1:exon
so has part: feature:261011-261073:-1:exon
so has part: feature:260573-260658:-1:exon
so has part: feature:260176-260224:-1:exon
so has part: feature:259778-259851:-1:exon
so has part: feature:259409-259487:-1:exon
so has part: feature:259211-259308:-1:exon
so has part: feature:259024-259088:-1:exon
so has part: feature:258768-258942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:263319-263453:-1:exon

position:263319:-1
position: 263319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:263129-263216:-1:exon

position:263129:-1
position: 263129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:263216:-1
position: 263216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:262747-262825:-1:exon

position:262747:-1
position: 262747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262825:-1
position: 262825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:262525-262660:-1:exon

position:262525:-1
position: 262525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262660:-1
position: 262660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262278-262354:-1:exon

position:262278:-1
position: 262278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262354:-1
position: 262354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:262040-262206:-1:exon

position:262040:-1
position: 262040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:262206:-1
position: 262206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:261690-261727:-1:exon

position:261690:-1
position: 261690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261727:-1
position: 261727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:261329-261448:-1:exon

position:261329:-1
position: 261329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261448:-1
position: 261448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:261158-261248:-1:exon

position:261158:-1
position: 261158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261248:-1
position: 261248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:261011-261073:-1:exon

position:261011:-1
position: 261011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261073:-1
position: 261073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:260573-260658:-1:exon

position:260573:-1
position: 260573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260658:-1
position: 260658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:260176-260224:-1:exon

position:260176:-1
position: 260176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:260224:-1
position: 260224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:259778-259851:-1:exon

position:259778:-1
position: 259778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259851:-1
position: 259851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:259409-259487:-1:exon

position:259409:-1
position: 259409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259487:-1
position: 259487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:259211-259308:-1:exon

position:259211:-1
position: 259211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259308:-1
position: 259308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:259024-259088:-1:exon

position:259024:-1
position: 259024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259088:-1
position: 259088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:258768-258942:-1:exon

position:258942:-1
position: 258942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC37A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC37A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate exchanger SLC37A2
translation: GGNWLLLNPLSLTPLSCSYRGLTLVLTFLSYTSYHLSRKPISIVKSQLHLNCSALGTNPHNDSNSTTWCSWAPFDQDNYKELFGALDNAFLVAYAIGMFISGIFGERLPLRYYLSVGMLLSGIFTALFGFGYFWNIHVLWYYIIVQVCNGLAQTTGWPSVVACVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGAWVSSEWGLSFIVPGIIIAVIGIVCFFFLVEHPEDVGCSPPQQHDASDEKEPEGMTSEDRSSTDPKELAEELEAISFLGALRIPGVVEFSLCLLFAKLVSYTFLYWLPLYIVNVAHFGAKEAGDLSTLFDVGGILGGIFAGLISDYTGGRATTCCVMLVVAAPMLFLYNHVGQNGIGTSIAMLIVCGALVNGPYALITTAVSADLGTHESLKGNARALSTVTAIIDGTGSVGAALGPLLAGLISPTGWNNVFYMLIAADVLACLLLARVVVKEVRAWYGCMARKRGSSVQLTESVLDGK
SIO_010081: SLC37A2
subclass of: SO_0000673
so part of: SLC37A2
location: complement(join(258900..258942,259024..259088,259211..259308,259409..259487,259778..259851,260176..260224,260573..260658,261011..261073,261158..261248,261329..261448,261690..261727,262040..262206,262278..262354,262525..262660,262747..262825,263129..263216,263319..>263453))
location: region:258900-263453:-1
so has part: feature:263319-263453:-1:exon
so has part: feature:263129-263216:-1:exon
so has part: feature:262747-262825:-1:exon
so has part: feature:262525-262660:-1:exon
so has part: feature:262278-262354:-1:exon
so has part: feature:262040-262206:-1:exon
so has part: feature:261690-261727:-1:exon
so has part: feature:261329-261448:-1:exon
so has part: feature:261158-261248:-1:exon
so has part: feature:261011-261073:-1:exon
so has part: feature:260573-260658:-1:exon
so has part: feature:260176-260224:-1:exon
so has part: feature:259778-259851:-1:exon
so has part: feature:259409-259487:-1:exon
so has part: feature:259211-259308:-1:exon
so has part: feature:259024-259088:-1:exon
so has part: feature:258900-258942:-1:exon

XP_031412713.1
type: Protein
SIO_000068: ncbiprotein

position:258900:-1
position: 258900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:263319-263453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:263129-263216:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:262747-262825:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262525-262660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262278-262354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262040-262206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:261690-261727:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:261329-261448:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:261158-261248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:261011-261073:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:260573-260658:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:260176-260224:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259778-259851:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:259409-259487:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:259211-259308:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:259024-259088:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:258900-258942:-1:exon

CCDC15
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(267229..281853)
location: region:267229-281853:-1
so has part: feature:267229-281853:-1:exon
subclass of: SO_0000010

100543229
type: Gene
SIO_000068: ncbigene

position:267229:-1
position: 267229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281853:-1
position: 281853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:267229-281853:-1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_019622920.2
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(267229..267565,268319..268386,268535..268714,270796..270899,271002..271049,272625..272744,274410..274565,274850..274948,278085..278201,278745..278924,279726..279875,281574..281850))
location: region:267229-281850:-1
so has part: feature:281574-281850:-1:exon
so has part: feature:279726-279875:-1:exon
so has part: feature:278745-278924:-1:exon
so has part: feature:278085-278201:-1:exon
so has part: feature:274850-274948:-1:exon
so has part: feature:274410-274565:-1:exon
so has part: feature:272625-272744:-1:exon
so has part: feature:271002-271049:-1:exon
so has part: feature:270796-270899:-1:exon
so has part: feature:268535-268714:-1:exon
so has part: feature:268319-268386:-1:exon
so has part: feature:267229-267565:-1:exon

position:281850:-1
position: 281850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281574-281850:-1:exon

position:281574:-1
position: 281574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:279726-279875:-1:exon

position:279726:-1
position: 279726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279875:-1
position: 279875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:278745-278924:-1:exon

position:278745:-1
position: 278745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278924:-1
position: 278924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278085-278201:-1:exon

position:278085:-1
position: 278085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278201:-1
position: 278201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:274850-274948:-1:exon

position:274850:-1
position: 274850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274948:-1
position: 274948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:274410-274565:-1:exon

position:274410:-1
position: 274410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274565:-1
position: 274565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:272625-272744:-1:exon

position:272625:-1
position: 272625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272744:-1
position: 272744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:271002-271049:-1:exon

position:271002:-1
position: 271002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271049:-1
position: 271049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:270796-270899:-1:exon

position:270796:-1
position: 270796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270899:-1
position: 270899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:268535-268714:-1:exon

position:268535:-1
position: 268535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268714:-1
position: 268714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:268319-268386:-1:exon

position:268319:-1
position: 268319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268386:-1
position: 268386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:267229-267565:-1:exon

position:267565:-1
position: 267565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_019622919.2
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(267229..267565,268319..268467,268535..268714,270796..270899,271002..271049,272625..272744,274410..274565,274850..274948,278085..278201,278745..278924,279726..279875,281574..281837))
location: region:267229-281837:-1
so has part: feature:281574-281837:-1:exon
so has part: feature:279726-279875:-1:exon
so has part: feature:278745-278924:-1:exon
so has part: feature:278085-278201:-1:exon
so has part: feature:274850-274948:-1:exon
so has part: feature:274410-274565:-1:exon
so has part: feature:272625-272744:-1:exon
so has part: feature:271002-271049:-1:exon
so has part: feature:270796-270899:-1:exon
so has part: feature:268535-268714:-1:exon
so has part: feature:268319-268467:-1:exon
so has part: feature:267229-267565:-1:exon

position:281837:-1
position: 281837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281574-281837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279726-279875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278745-278924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278085-278201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274850-274948:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274410-274565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272625-272744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:271002-271049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:270796-270899:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:268535-268714:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:268319-268467:-1:exon

position:268467:-1
position: 268467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:267229-267565:-1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_010723552.3
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(267229..267565,268319..268467,268535..268714,270796..270899,272625..272744,274410..274565,274850..274948,278085..278201,278745..278924,279726..279875,281574..281829))
location: region:267229-281829:-1
so has part: feature:281574-281829:-1:exon
so has part: feature:279726-279875:-1:exon
so has part: feature:278745-278924:-1:exon
so has part: feature:278085-278201:-1:exon
so has part: feature:274850-274948:-1:exon
so has part: feature:274410-274565:-1:exon
so has part: feature:272625-272744:-1:exon
so has part: feature:270796-270899:-1:exon
so has part: feature:268535-268714:-1:exon
so has part: feature:268319-268467:-1:exon
so has part: feature:267229-267565:-1:exon

position:281829:-1
position: 281829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281574-281829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279726-279875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278745-278924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278085-278201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274850-274948:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274410-274565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272625-272744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:270796-270899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268535-268714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:268319-268467:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267229-267565:-1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_019622921.2
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(267229..267565,268319..268467,268535..268714,270796..270899,271002..271049,272625..272744,274410..274565,278085..278201,278745..278924,279726..279875,281574..281828))
location: region:267229-281828:-1
so has part: feature:281574-281828:-1:exon
so has part: feature:279726-279875:-1:exon
so has part: feature:278745-278924:-1:exon
so has part: feature:278085-278201:-1:exon
so has part: feature:274410-274565:-1:exon
so has part: feature:272625-272744:-1:exon
so has part: feature:271002-271049:-1:exon
so has part: feature:270796-270899:-1:exon
so has part: feature:268535-268714:-1:exon
so has part: feature:268319-268467:-1:exon
so has part: feature:267229-267565:-1:exon

position:281828:-1
position: 281828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281574-281828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279726-279875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278745-278924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278085-278201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274410-274565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272625-272744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271002-271049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:270796-270899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268535-268714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:268319-268467:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267229-267565:-1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15 isoform X4
translation: MRLRHFQGEVKRRVNQQVKMRRKQQLQRSWEATEKESNLAMQCLGSVLQLTPKKNTCVFRSRPVPTICSPAALARQEEQGVPSEPFQQQAAQLSKAMRQVRRRLASCRTVRRGMQAPELPGGTWRLGQSQDESVLCAPVPTEGENEELILAGHHDLPAELQDQMTAPHQAEQDDFYIKMEFRKFSDGSAKDLNSPESLQRTTLGCQAPLVLWAGIDQEESKKQSLAIRRLLRILWRKSERRIEYLRCRRLFMSAEREQVKEQQRQKERQKRIAEIKSKKENQRQVEEQRMQKAAEQQEPFLGDGVCKVLAQLELEERRLNKVKQKEQRNKEYTRYVEALRAEVKEKMKLYNINLPPLCSCSSDFWESHPDTCANNCIFYKNHKAYSHALQSVISSCDLVDGRPKLPLRHLAALCTCPAKL
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(267453..267565,268319..268467,268535..268714,270796..270899,271002..271049,272625..272744,274410..274565,278085..278201,278745..278924,279726..279821))
location: region:267453-279821:-1
so has part: feature:279726-279821:-1:exon
so has part: feature:278745-278924:-1:exon
so has part: feature:278085-278201:-1:exon
so has part: feature:274410-274565:-1:exon
so has part: feature:272625-272744:-1:exon
so has part: feature:271002-271049:-1:exon
so has part: feature:270796-270899:-1:exon
so has part: feature:268535-268714:-1:exon
so has part: feature:268319-268467:-1:exon
so has part: feature:267453-267565:-1:exon

XP_019478466.1
type: Protein
SIO_000068: ncbiprotein

position:267453:-1
position: 267453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279821:-1
position: 279821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279726-279821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278745-278924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278085-278201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274410-274565:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:272625-272744:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:271002-271049:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270796-270899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268535-268714:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268319-268467:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267453-267565:-1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15 isoform X2
translation: MRLRHFQGEVKRRVNQQVKMRRKQQLQRSWEATEKESNLAMQCLGSVLQLTPKKNTCVFRSRPVPTICSPAALARQEEQGVPSEPFQQQAAQLSKAMRQVRRRLASCRTVRRGMQAPELPGGTWRLGQSQDEPAHLPSERAQNECHLSNPAHPTSLQSEVLPRKESVLCAPVPTEGENEELILAGHHDLPAELQDQMTAPHQAEQDDFYIKMEFRKFSDGSAKDLNSPESLQRTTLGCQAPLVLWAGIDQEESKKQRRIEYLRCRRLFMSAEREQVKEQQRQKERQKRIAEIKSKKENQRQVEEQRMQKAAEQQEPFLGDGVCKVLAQLELEERRLNKVKQKEQRNKEYTRYVEALRAEVKEKMKLYNINLPPLCSCSSDFWESHPDTCANNCIFYKNHKAYSHALQSVISSCDLVDGRPKLPLRHLAALCTCPAKL
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(267453..267565,268319..268467,268535..268714,270796..270899,272625..272744,274410..274565,274850..274948,278085..278201,278745..278924,279726..279821))
location: region:267453-279821:-1
so has part: feature:279726-279821:-1:exon
so has part: feature:278745-278924:-1:exon
so has part: feature:278085-278201:-1:exon
so has part: feature:274850-274948:-1:exon
so has part: feature:274410-274565:-1:exon
so has part: feature:272625-272744:-1:exon
so has part: feature:270796-270899:-1:exon
so has part: feature:268535-268714:-1:exon
so has part: feature:268319-268467:-1:exon
so has part: feature:267453-267565:-1:exon

XP_010721854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279726-279821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278745-278924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278085-278201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274850-274948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274410-274565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272625-272744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:270796-270899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:268535-268714:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268319-268467:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:267453-267565:-1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15 isoform X3
translation: MRLRHFQGEVKRRVNQQVKMRRKQQLQRSWEATEKESNLAMQCLGSVLQLTPKKNTCVFRSRPVPTICSPAALARQEEQGVPSEPFQQQAAQLSKAMRQVRRRLASCRTVRRGMQAPELPGGTWRLGQSQDEPAHLPSERAQNECHLSNPAHPTSLQSEVLPRKESVLCAPVPTEGENEELILAGHHDLPAELQDQMTAPHQAEQDDFYIKMEFRKFSDGSAKDLNSPESLQRTTLGCQAPLVLWAGIDQEESKKQSLAIRRLLRILWRKSERRIEYLRCRRLFMSAEREQVKEQQRQKERQKRIAEIKSKKENQRQVEEQRMQKAAEQQEPFLGDGVCKVLAQLELEERRLNKVKQKEQRNKEYTSSDFWESHPDTCANNCIFYKNHKAYSHALQSVISSCDLVDGRPKLPLRHLAALCTCPAKL
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(267453..267565,268319..268386,268535..268714,270796..270899,271002..271049,272625..272744,274410..274565,274850..274948,278085..278201,278745..278924,279726..279821))
location: region:267453-279821:-1
so has part: feature:279726-279821:-1:exon
so has part: feature:278745-278924:-1:exon
so has part: feature:278085-278201:-1:exon
so has part: feature:274850-274948:-1:exon
so has part: feature:274410-274565:-1:exon
so has part: feature:272625-272744:-1:exon
so has part: feature:271002-271049:-1:exon
so has part: feature:270796-270899:-1:exon
so has part: feature:268535-268714:-1:exon
so has part: feature:268319-268386:-1:exon
so has part: feature:267453-267565:-1:exon

XP_019478465.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279726-279821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278745-278924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278085-278201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274850-274948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274410-274565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272625-272744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271002-271049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:270796-270899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268535-268714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:268319-268386:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267453-267565:-1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15 isoform X1
translation: MRLRHFQGEVKRRVNQQVKMRRKQQLQRSWEATEKESNLAMQCLGSVLQLTPKKNTCVFRSRPVPTICSPAALARQEEQGVPSEPFQQQAAQLSKAMRQVRRRLASCRTVRRGMQAPELPGGTWRLGQSQDEPAHLPSERAQNECHLSNPAHPTSLQSEVLPRKESVLCAPVPTEGENEELILAGHHDLPAELQDQMTAPHQAEQDDFYIKMEFRKFSDGSAKDLNSPESLQRTTLGCQAPLVLWAGIDQEESKKQSLAIRRLLRILWRKSERRIEYLRCRRLFMSAEREQVKEQQRQKERQKRIAEIKSKKENQRQVEEQRMQKAAEQQEPFLGDGVCKVLAQLELEERRLNKVKQKEQRNKEYTRYVEALRAEVKEKMKLYNINLPPLCSCSSDFWESHPDTCANNCIFYKNHKAYSHALQSVISSCDLVDGRPKLPLRHLAALCTCPAKL
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(267453..267565,268319..268467,268535..268714,270796..270899,271002..271049,272625..272744,274410..274565,274850..274948,278085..278201,278745..278924,279726..279821))
location: region:267453-279821:-1
so has part: feature:279726-279821:-1:exon
so has part: feature:278745-278924:-1:exon
so has part: feature:278085-278201:-1:exon
so has part: feature:274850-274948:-1:exon
so has part: feature:274410-274565:-1:exon
so has part: feature:272625-272744:-1:exon
so has part: feature:271002-271049:-1:exon
so has part: feature:270796-270899:-1:exon
so has part: feature:268535-268714:-1:exon
so has part: feature:268319-268467:-1:exon
so has part: feature:267453-267565:-1:exon

XP_019478464.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279726-279821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278745-278924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278085-278201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274850-274948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274410-274565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272625-272744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271002-271049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:270796-270899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268535-268714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:268319-268467:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267453-267565:-1:exon

CCDC15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC15
product: coiled-coil domain containing 15, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_019622922.2
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(268334..268467,268573..268714,270796..270899,271002..271049,272625..272744,274410..274565,274850..274948,278085..278201,278745..278924,279726..279875,281574..281853))
location: region:268334-281853:-1
so has part: feature:281574-281853:-1:exon
so has part: feature:279726-279875:-1:exon
so has part: feature:278745-278924:-1:exon
so has part: feature:278085-278201:-1:exon
so has part: feature:274850-274948:-1:exon
so has part: feature:274410-274565:-1:exon
so has part: feature:272625-272744:-1:exon
so has part: feature:271002-271049:-1:exon
so has part: feature:270796-270899:-1:exon
so has part: feature:268573-268714:-1:exon
so has part: feature:268334-268467:-1:exon

position:268334:-1
position: 268334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281574-281853:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279726-279875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278745-278924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278085-278201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274850-274948:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:274410-274565:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:272625-272744:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:271002-271049:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:270796-270899:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:268573-268714:-1:exon

position:268573:-1
position: 268573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:268334-268467:-1:exon

CCDC15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 15 isoform X5
translation: MRLRHFQGEVKRRVNQQVKMRRKQQLQRSWEATEKESNLAMQCLGSVLQLTPKKNTCVFRSRPVPTICSPAALARQEEQGVPSEPFQQQAAQLSKAMRQVRRRLASCRTVRRGMQAPELPGGTWRLGQSQDEPAHLPSERAQNECHLSNPAHPTSLQSEVLPRKESVLCAPVPTEGENEELILAGHHDLPAELQDQMTAPHQAEQDDFYIKMEFRKFSDGSAKDLNSPESLQRTTLGCQAPLVLWAGIDQEESKKQSLAIRRLLRILWRKSERRIEYLRCRRLFMSAEREQVKEQQRQKERQKRIAEIKSKKENQRQVEEQRMQKAAEQQEPFLGDGVCKVLAQLELEERRLNKVCRSFKSRGEGEDETVQHQLASPVLLQL
SIO_010081: CCDC15
subclass of: SO_0000673
so part of: CCDC15
location: complement(join(268381..268467,268573..268714,270796..270899,271002..271049,272625..272744,274410..274565,274850..274948,278085..278201,278745..278924,279726..279821))
location: region:268381-279821:-1
so has part: feature:279726-279821:-1:exon
so has part: feature:278745-278924:-1:exon
so has part: feature:278085-278201:-1:exon
so has part: feature:274850-274948:-1:exon
so has part: feature:274410-274565:-1:exon
so has part: feature:272625-272744:-1:exon
so has part: feature:271002-271049:-1:exon
so has part: feature:270796-270899:-1:exon
so has part: feature:268573-268714:-1:exon
so has part: feature:268381-268467:-1:exon

XP_019478467.1
type: Protein
SIO_000068: ncbiprotein

position:268381:-1
position: 268381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279726-279821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:278745-278924:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278085-278201:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:274850-274948:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:274410-274565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:272625-272744:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:271002-271049:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:270796-270899:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:268573-268714:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:268381-268467:-1:exon

HEPACAM
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 284127..288746
location: region:284127-288746:1
so has part: feature:284127-288746:1:exon
subclass of: SO_0000010

100543388
type: Gene
SIO_000068: ncbigene

position:284127:1
position: 284127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288746:1
position: 288746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284127-288746:1:exon

HEPACAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEPACAM
product: hepatic and glial cell adhesion molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010723555.2
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: join(284127..285828,286066..286347,286436..286529,287033..287103,287171..287241,287319..288746)
location: region:284127-288746:1
so has part: feature:284127-285828:1:exon
so has part: feature:286066-286347:1:exon
so has part: feature:286436-286529:1:exon
so has part: feature:287033-287103:1:exon
so has part: feature:287171-287241:1:exon
so has part: feature:287319-288746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284127-285828:1:exon

position:285828:1
position: 285828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:286066-286347:1:exon

position:286066:1
position: 286066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286347:1
position: 286347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:286436-286529:1:exon

position:286436:1
position: 286436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286529:1
position: 286529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:287033-287103:1:exon

position:287033:1
position: 287033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287103:1
position: 287103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:287171-287241:1:exon

position:287171:1
position: 287171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287241:1
position: 287241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:287319-288746:1:exon

position:287319:1
position: 287319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEPACAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEPACAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hepatocyte cell adhesion molecule
translation: MLAAAPGGDFPFFGEPGRGARCLPTSPGLLAGVNITSPSALVRGTAGKAALLSVRYASASPDKPVVKWQLKRDKPVTVVQSIGTEIIGNLRPDYRDRIRVLENGSLLISPLQLADEGSYEVEVSITDDTFTGEKTINLTVDIPISKPQVLVASSTVLELSEFFTLNCSHENGTKPTYTWLKDGRPLNNDSRLLLSPDQKILTITRVLMADDDVYSCLVENPISQGRSVPVKLTVYRRSSLYIILSTGGIFLLVTLVTVCACWKPSKKPKQQAEPPPPDYTEQDEEHPKHEADTIPRGADHDRKTPLALYILKEQDTAAPQEDSSPPAGRSPGRGARRYHRSPAPARPPRSPPGSPARSRSAARLLRATGVPAIREQEEGSALEISA
SIO_010081: HEPACAM
subclass of: SO_0000673
so part of: HEPACAM
location: join(285405..285828,286066..286347,286436..286529,287033..287103,287171..287241,287319..287537)
location: region:285405-287537:1
so has part: feature:285405-285828:1:exon
so has part: feature:286066-286347:1:exon
so has part: feature:286436-286529:1:exon
so has part: feature:287033-287103:1:exon
so has part: feature:287171-287241:1:exon
so has part: feature:287319-287537:1:exon

XP_010721857.1
type: Protein
SIO_000068: ncbiprotein

position:285405:1
position: 285405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287537:1
position: 287537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285405-285828:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286066-286347:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286436-286529:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:287033-287103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287171-287241:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:287319-287537:1:exon

ROBO4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 288999..299016
location: region:288999-299016:1
so has part: feature:288999-299016:1:exon
subclass of: SO_0000010

104914380
type: Gene
SIO_000068: ncbigene

position:288999:1
position: 288999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299016:1
position: 299016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288999-299016:1:exon

ROBO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ROBO4
product: roundabout guidance receptor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019622923.2
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: join(288999..289277,289364..289642,289717..289855,289931..290058,290715..290830,290905..291124,291199..291323,291578..291749,291829..291979,292059..292189,292731..292853,292930..293209,293319..294117,298222..299016)
location: region:288999-299016:1
so has part: feature:288999-289277:1:exon
so has part: feature:289364-289642:1:exon
so has part: feature:289717-289855:1:exon
so has part: feature:289931-290058:1:exon
so has part: feature:290715-290830:1:exon
so has part: feature:290905-291124:1:exon
so has part: feature:291199-291323:1:exon
so has part: feature:291578-291749:1:exon
so has part: feature:291829-291979:1:exon
so has part: feature:292059-292189:1:exon
so has part: feature:292731-292853:1:exon
so has part: feature:292930-293209:1:exon
so has part: feature:293319-294117:1:exon
so has part: feature:298222-299016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:288999-289277:1:exon

position:289277:1
position: 289277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:289364-289642:1:exon

position:289364:1
position: 289364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289642:1
position: 289642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:289717-289855:1:exon

position:289717:1
position: 289717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289855:1
position: 289855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289931-290058:1:exon

position:289931:1
position: 289931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290058:1
position: 290058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290715-290830:1:exon

position:290715:1
position: 290715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290830:1
position: 290830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:290905-291124:1:exon

position:290905:1
position: 290905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291124:1
position: 291124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:291199-291323:1:exon

position:291199:1
position: 291199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291323:1
position: 291323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:291578-291749:1:exon

position:291578:1
position: 291578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291749:1
position: 291749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291829-291979:1:exon

position:291829:1
position: 291829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291979:1
position: 291979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:292059-292189:1:exon

position:292059:1
position: 292059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292189:1
position: 292189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:292731-292853:1:exon

position:292731:1
position: 292731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292853:1
position: 292853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:292930-293209:1:exon

position:292930:1
position: 292930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293209:1
position: 293209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:293319-294117:1:exon

position:293319:1
position: 293319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294117:1
position: 294117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:298222-299016:1:exon

position:298222:1
position: 298222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ROBO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ROBO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 4
translation: MEGGWAMALGLWATALCLGGCHPPGGDMESHSTQRPAELRDNFRLQPGDLVVVAGQALELDCVPPAGQPEPRVTWRKDGVTLRLAGGRHQLTRGKLRVASARRSDAGVYVCVAANAAGERHSRGAQVTILEKPVIVRRPSDVTAVAGSTVELSCGAQGDPAPRVQWHKESGDLPWGRHEVDQEHTLRLHAVTAADGGAYVCTAQSQLGSAAATARLRVEGQLPAGRWETTRQNLLAVQLQLDNGTALPTNATVWLRWRMVTPGPAPEGFVVLYRCLLPASTAWSQQDVGRELSAVIPALQRGYQYEFKVRPYAGGTQGLDSNSWHLWIPEEAVPSAAPQRVTVGQAAPGNGTVIVSWEPPPPDAHNGIIRGYQVWSLGEGWLQPTNRTVDGGTRRLETLLHGPGARYCIQVAAFNGAGLGIPSNVTCGVLEMMAGSTGVVRVLQQPAVIAATGSLLWLALLALLLLICQRRASQGSMAQHGQEDTDVPWLSSPWKPVCVPQNLSGSSSLSSRLLGSDSRDPQPSPLTSELPSLSPATTPSCSHLCREHPKTSTSSLALWEHIRKRELDRTHSSPVPVAGLRAIPVPLCAGEWGTHFDSVDRWPQQKGQDGDTALAGEDPWWLPTISSPKPRRSSVASIGAGMLVAPAGHPHVWHPMGTRFPAMGCSRDTSPVTGNPKDTSTVTGNPGDMSPVTRSPKNVSPVTRNSKNTRKHRDMSSVTRSPVDMSPATVSRKEMLLATRPSRDVSPVTECPRVRSPVIGHSKEKSPATRSPRDLSSASSHSLATTVQEDMSPFTQHPRDMFSATRCPRDTFPAARHPDDMPMIPQNPRDTSVFTRGPRDTLVATKDVSPEPGRLSPALSDGVLTPQRVAEDLERVQEAHRPTNIPRPEVSPAHPQRVPVPRPLSPPHTYGYICGPPPSAMGDGEXEEEEEEEEEEEKPEVWGHEGSPGGSLLNGWGSVTEDTVPSTRCSLASSSDGSFLLDASFARVLAVAVDSLCFSLEDIDGGGEGAAAPLHRLASSPLCGEVALGTGTGKGMEMGSLVGMPRVGSQWGGLLSRDRRDRSVAAPVLKQC
SIO_010081: ROBO4
subclass of: SO_0000673
so part of: ROBO4
location: join(289166..289277,289364..289642,289717..289855,289931..290058,290715..290830,290905..291124,291199..291323,291578..291749,291829..291979,292059..292189,292731..292853,292930..293209,293319..294117,298222..298665)
location: region:289166-298665:1
so has part: feature:289166-289277:1:exon
so has part: feature:289364-289642:1:exon
so has part: feature:289717-289855:1:exon
so has part: feature:289931-290058:1:exon
so has part: feature:290715-290830:1:exon
so has part: feature:290905-291124:1:exon
so has part: feature:291199-291323:1:exon
so has part: feature:291578-291749:1:exon
so has part: feature:291829-291979:1:exon
so has part: feature:292059-292189:1:exon
so has part: feature:292731-292853:1:exon
so has part: feature:292930-293209:1:exon
so has part: feature:293319-294117:1:exon
so has part: feature:298222-298665:1:exon

XP_019478468.1
type: Protein
SIO_000068: ncbiprotein

position:289166:1
position: 289166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298665:1
position: 298665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289166-289277:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:289364-289642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289717-289855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289931-290058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290715-290830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:290905-291124:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291199-291323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291578-291749:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291829-291979:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:292059-292189:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:292731-292853:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:292930-293209:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:293319-294117:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:298222-298665:1:exon

ROBO3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ROBO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(298883..306363)
location: region:298883-306363:-1
so has part: feature:298883-306363:-1:exon
subclass of: SO_0000010

104914381
type: Gene
SIO_000068: ncbigene

position:298883:-1
position: 298883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306363:-1
position: 306363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:298883-306363:-1:exon

ROBO3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ROBO3
product: roundabout guidance receptor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556837.1
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: complement(join(298883..298955,299151..299232,299313..299419,299994..300155,300221..300368,300441..300614,300687..300757,300825..300966,301035..301220,301329..301500,301950..302062,302138..302539,302623..302789,302875..303040,303125..303206,303439..303647,303722..304093,304334..304461,304969..305107,305178..305298,305369..305526,305834..306363))
location: region:298883-306363:-1
so has part: feature:305834-306363:-1:exon
so has part: feature:305369-305526:-1:exon
so has part: feature:305178-305298:-1:exon
so has part: feature:304969-305107:-1:exon
so has part: feature:304334-304461:-1:exon
so has part: feature:303722-304093:-1:exon
so has part: feature:303439-303647:-1:exon
so has part: feature:303125-303206:-1:exon
so has part: feature:302875-303040:-1:exon
so has part: feature:302623-302789:-1:exon
so has part: feature:302138-302539:-1:exon
so has part: feature:301950-302062:-1:exon
so has part: feature:301329-301500:-1:exon
so has part: feature:301035-301220:-1:exon
so has part: feature:300825-300966:-1:exon
so has part: feature:300687-300757:-1:exon
so has part: feature:300441-300614:-1:exon
so has part: feature:300221-300368:-1:exon
so has part: feature:299994-300155:-1:exon
so has part: feature:299313-299419:-1:exon
so has part: feature:299151-299232:-1:exon
so has part: feature:298883-298955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:305834-306363:-1:exon

position:305834:-1
position: 305834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:305369-305526:-1:exon

position:305369:-1
position: 305369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305526:-1
position: 305526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305178-305298:-1:exon

position:305178:-1
position: 305178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305298:-1
position: 305298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:304969-305107:-1:exon

position:304969:-1
position: 304969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305107:-1
position: 305107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:304334-304461:-1:exon

position:304334:-1
position: 304334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304461:-1
position: 304461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:303722-304093:-1:exon

position:303722:-1
position: 303722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304093:-1
position: 304093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:303439-303647:-1:exon

position:303439:-1
position: 303439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303647:-1
position: 303647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:303125-303206:-1:exon

position:303125:-1
position: 303125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303206:-1
position: 303206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:302875-303040:-1:exon

position:302875:-1
position: 302875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303040:-1
position: 303040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:302623-302789:-1:exon

position:302623:-1
position: 302623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302789:-1
position: 302789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:302138-302539:-1:exon

position:302138:-1
position: 302138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302539:-1
position: 302539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:301950-302062:-1:exon

position:301950:-1
position: 301950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302062:-1
position: 302062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:301329-301500:-1:exon

position:301329:-1
position: 301329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301500:-1
position: 301500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:301035-301220:-1:exon

position:301035:-1
position: 301035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301220:-1
position: 301220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:300825-300966:-1:exon

position:300825:-1
position: 300825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300966:-1
position: 300966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:300687-300757:-1:exon

position:300687:-1
position: 300687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300757:-1
position: 300757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:300441-300614:-1:exon

position:300441:-1
position: 300441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300614:-1
position: 300614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:300221-300368:-1:exon

position:300221:-1
position: 300221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300368:-1
position: 300368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:299994-300155:-1:exon

position:299994:-1
position: 299994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300155:-1
position: 300155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:299313-299419:-1:exon

position:299313:-1
position: 299313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299419:-1
position: 299419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:299151-299232:-1:exon

position:299151:-1
position: 299151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299232:-1
position: 299232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:298883-298955:-1:exon

position:298955:-1
position: 298955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROBO3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ROBO3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 3
translation: MSHPSPGSHPRLEDSAPRIVEHPSDLLVSRGEPATLSCRAEGRPSPTVEWYKDGERVETDHEDPRSHRMLLPSGSLFFLRIVHGRRSKPDEGIYVCVARNYLGEATSRNASLEVAVLRDDFRQSPGDVVVAAGEPAVLECVPPRGHPEPTVTWKKDGTRLSDKDERITIRGGKLMMATTRKSDAGIYVCVATNMVGERDSEPAELVVFERPAFGRRPQNQAVLEDQAAEFPCEALGDPPPTARWRREDGELPAGRWELLADNTLRISRVRAEDEGTYTCMAENSVGRSEASGTLIVRVPPQLITRPRNQTVPPGQSVTFQCETTGNPPPAVFWQKEGSQVRPLPTSAPTAPHRAPKPSASPSAQTLLFPGQSPPAAGRISVASSGAMTIATVQPTDAGYYLCQAISVAGSVLAKALLEVEAAPAQPRPPVIRWGPANLTVLPVGATAQLPCWAEGEPSPHVGWLKDGRTVLGSESRASLLENGTLLISNMRVTDSGQYECVATSSMGEMRWSGSLQVQGDGSLLSPPSPEPGILPGPPSTPLVTNITKSSVTLTWKGNEQSGGTAVTYIVEAFSEAMGGPWQTVAANVEGETHTVQGLVPDTVYLFLVRALNAHGLSDPSGISEPIRTQADTSPTPQVSPELARVAVHLQEPVVLPPGAVRLAWTVSVGTRRVGGDTVLHLCHPPHLPCPQVEPPSPSVQGYQVLYRRRGGRWEAWDVRAPGERGALLTGLRHGQDYEVKVRPFYLHLHGPDSAVRALRMPEAAPSAPPRAVSVAGNGTSVRISWQPPPPAEQNGVILDYRIWCLGNESRFHINQSVEGTVLATVLQGLVPGVPYRAEVAAATGAGVGARSAPISIRIAPPVEQDVGPVGWGSMAERMAAVARRPAFIAGVSGALWLILAGFAAWLYSRRRRRKELSHFTASFAFAPTGASMGAVGPRHGPTASSLPPPALSTLTFPHTPVPAHSSPRNAHPWLADAWRGGGLDATERYYNEAGISRYIAQTEPFGPGNAEGPIYSSIEAGGDELRTFHRPCSQHGPETLYGHSAPGQHGKNLGKAVQTPVLSWTELLPPPPSASELSQYTEEEGEKEEEEEMDEEDGILGLEEHCPSTEDAPQHTASSPATPTGCWTPAATAPVPHEDTRSLQRFSSPRSPRRPPRGTAPSPSPPLSPRSPDTCKGPVPRAHRPYGAGKTRSETPKSHPKPKGGRYPREQWTGGGCAQSRREGVEDALGGDKDGIDEG
SIO_010081: ROBO3
subclass of: SO_0000673
so part of: ROBO3
location: complement(join(298883..298955,299151..299232,299313..299419,299994..300155,300221..300368,300441..300614,300687..300757,300825..300966,301035..301220,301329..301500,301950..302062,302138..302539,302623..302789,302875..303040,303125..303206,303439..303647,303722..304093,304334..304461,304969..305107,305178..305298,305369..305526,305834..306179))
location: region:298883-306179:-1
so has part: feature:305834-306179:-1:exon
so has part: feature:305369-305526:-1:exon
so has part: feature:305178-305298:-1:exon
so has part: feature:304969-305107:-1:exon
so has part: feature:304334-304461:-1:exon
so has part: feature:303722-304093:-1:exon
so has part: feature:303439-303647:-1:exon
so has part: feature:303125-303206:-1:exon
so has part: feature:302875-303040:-1:exon
so has part: feature:302623-302789:-1:exon
so has part: feature:302138-302539:-1:exon
so has part: feature:301950-302062:-1:exon
so has part: feature:301329-301500:-1:exon
so has part: feature:301035-301220:-1:exon
so has part: feature:300825-300966:-1:exon
so has part: feature:300687-300757:-1:exon
so has part: feature:300441-300614:-1:exon
so has part: feature:300221-300368:-1:exon
so has part: feature:299994-300155:-1:exon
so has part: feature:299313-299419:-1:exon
so has part: feature:299151-299232:-1:exon
so has part: feature:298883-298955:-1:exon

XP_031412697.1
type: Protein
SIO_000068: ncbiprotein

position:306179:-1
position: 306179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:305834-306179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:305369-305526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305178-305298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304969-305107:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304334-304461:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:303722-304093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:303439-303647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:303125-303206:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:302875-303040:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302623-302789:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:302138-302539:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:301950-302062:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:301329-301500:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:301035-301220:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:300825-300966:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:300687-300757:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:300441-300614:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300221-300368:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:299994-300155:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:299313-299419:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:299151-299232:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:298883-298955:-1:exon

MSANTD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 315078..335115
location: region:315078-335115:1
so has part: feature:315078-335115:1:exon
subclass of: SO_0000010

100542146
type: Gene
SIO_000068: ncbigene

position:315078:1
position: 315078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335115:1
position: 335115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315078-335115:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 101 samples with support for all annotated introns
transcript id: XM_031556854.1
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(315078..319546,320534..320656,324947..325205,326823..326883,333709..335115)
location: region:315078-335115:1
so has part: feature:315078-319546:1:exon
so has part: feature:320534-320656:1:exon
so has part: feature:324947-325205:1:exon
so has part: feature:326823-326883:1:exon
so has part: feature:333709-335115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315078-319546:1:exon

position:319546:1
position: 319546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320534-320656:1:exon

position:320534:1
position: 320534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320656:1
position: 320656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324947-325205:1:exon

position:324947:1
position: 324947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325205:1
position: 325205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:326823-326883:1:exon

position:326823:1
position: 326823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326883:1
position: 326883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:333709-335115:1:exon

position:333709:1
position: 333709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_031556855.1
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(315078..319542,320534..320656,324947..325205,326823..326883,333709..335115)
location: region:315078-335115:1
so has part: feature:315078-319542:1:exon
so has part: feature:320534-320656:1:exon
so has part: feature:324947-325205:1:exon
so has part: feature:326823-326883:1:exon
so has part: feature:333709-335115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:315078-319542:1:exon

position:319542:1
position: 319542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320534-320656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324947-325205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326823-326883:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333709-335115:1:exon

MSANTD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MSANTD2
product: Myb/SANT DNA binding domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_010723556.3
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(320555..320656,324313..324357,324947..325205,326823..326883,333709..335115)
location: region:320555-335115:1
so has part: feature:320555-320656:1:exon
so has part: feature:324313-324357:1:exon
so has part: feature:324947-325205:1:exon
so has part: feature:326823-326883:1:exon
so has part: feature:333709-335115:1:exon

position:320555:1
position: 320555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320555-320656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324313-324357:1:exon

position:324313:1
position: 324313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324357:1
position: 324357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324947-325205:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326823-326883:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333709-335115:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2
translation: MEEFSQEDWGNHSQDLHCYQTGEQELDEVPTTKRTLKIKQESSEDAQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHDKPHSPLAEPRGADPSNETPGELEVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCVVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(325127..325205,326823..326883,333709..334561)
location: region:325127-334561:1
so has part: feature:325127-325205:1:exon
so has part: feature:326823-326883:1:exon
so has part: feature:333709-334561:1:exon

XP_031412714.1
type: Protein
SIO_000068: ncbiprotein

position:325127:1
position: 325127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334561:1
position: 334561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325127-325205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326823-326883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333709-334561:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2
translation: MEEFSQEDWGNHSQDLHCYQTGEQELDEVPTTKRTLKIKQESSEDAQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHDKPHSPLAEPRGADPSNETPGELEVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCVVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(325127..325205,326823..326883,333709..334561)
location: region:325127-334561:1
so has part: feature:325127-325205:1:exon
so has part: feature:326823-326883:1:exon
so has part: feature:333709-334561:1:exon

XP_031412715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325127-325205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326823-326883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333709-334561:1:exon

MSANTD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MSANTD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myb/SANT-like DNA-binding domain-containing protein 2
translation: MEEFSQEDWGNHSQDLHCYQTGEQELDEVPTTKRTLKIKQESSEDAQKRDVMQNIMQILESVQLKWELFQSWTDFSRLHLSNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRVIMTRVQKMNWKNVYYKFLEITISEARCLELHMEIDWIPIAHSKPTGGNVVQYLLPGGIPKSPGLYAIGYEECHDKPHSPLAEPRGADPSNETPGELEVPSPQASLRVEMESARIIYCYLGIAEVRTLQQCLFLHFQANTKTFSKEWVGINAFLSQNCVVEPGVSPKSIYIKFVEVERDFLSAGSLVECLEKAIGYPLKFNN
SIO_010081: MSANTD2
subclass of: SO_0000673
so part of: MSANTD2
location: join(325127..325205,326823..326883,333709..334561)
location: region:325127-334561:1
so has part: feature:325127-325205:1:exon
so has part: feature:326823-326883:1:exon
so has part: feature:333709-334561:1:exon

XP_010721858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:325127-325205:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:326823-326883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:333709-334561:1:exon

ESAM
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ESAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <340693..>342993
location: region:340693-342993:1
so has part: feature:340693-342993:1:exon
subclass of: SO_0000010

100543543
type: Gene
SIO_000068: ncbigene

position:340693:1
position: 340693
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:342993:1
position: 342993
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340693-342993:1:exon

ESAM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ESAM
product: endothelial cell adhesion molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 219 samples with support for all annotated introns
transcript id: XM_010723788.2
SIO_010081: ESAM
subclass of: SO_0000673
so part of: ESAM
location: join(<340693..340959,341462..341675,341750..341905,342257..342379,342474..342612,342852..>342993)
location: region:340693-342993:1
so has part: feature:340693-340959:1:exon
so has part: feature:341462-341675:1:exon
so has part: feature:341750-341905:1:exon
so has part: feature:342257-342379:1:exon
so has part: feature:342474-342612:1:exon
so has part: feature:342852-342993:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340693-340959:1:exon

position:340959:1
position: 340959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:341462-341675:1:exon

position:341462:1
position: 341462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341675:1
position: 341675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:341750-341905:1:exon

position:341750:1
position: 341750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341905:1
position: 341905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:342257-342379:1:exon

position:342257:1
position: 342257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342379:1
position: 342379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:342474-342612:1:exon

position:342474:1
position: 342474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342612:1
position: 342612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:342852-342993:1:exon

position:342852:1
position: 342852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ESAM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ESAM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-selective adhesion molecule
translation: QLVGALFCFVFFVFCFILFLYNWHPGLSRVPFSCGAGVCSAVLEVHVGTGSVYSVEGEGAVLPAWYTSSSQKKPYISWILKKADAEHFQILTYLDGEVKVEETELKPRVGFLHPVLTHNISLFINATREQDSGQYICSVNVVDDIISPIRSMAIINLTVLVPPAPPACRLKGSPTVGANVTLSCASQRGKPSPLYKWQRQEPTKQVFFPPAQDRARGTLKLTNLSLDMSGLYECEAENRVGSAKCSIILEVQSTSEGAIIAGAVLGSVGALATVAFFTQRVLGYRRKKRDGQEEAANEIKEDAVAPKTPTWTRTRPADTISKTSTLSSIVGSRDRPYGASPPSYTAS
SIO_010081: ESAM
subclass of: SO_0000673
so part of: ESAM
location: join(<340693..340959,341462..341675,341750..341905,342257..342379,342474..342612,342852..>342993)
location: region:340693-342993:1
so has part: feature:340693-340959:1:exon
so has part: feature:341462-341675:1:exon
so has part: feature:341750-341905:1:exon
so has part: feature:342257-342379:1:exon
so has part: feature:342474-342612:1:exon
so has part: feature:342852-342993:1:exon

XP_010722090.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340693-340959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:341462-341675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:341750-341905:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:342257-342379:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:342474-342612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:342852-342993:1:exon

NRGN
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NRGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(343339..347146)
location: region:343339-347146:-1
so has part: feature:343339-347146:-1:exon
subclass of: SO_0000010

100542298
type: Gene
SIO_000068: ncbigene

position:343339:-1
position: 343339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347146:-1
position: 347146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343339-347146:-1:exon

NRGN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NRGN
product: neurogranin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_010723559.2
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: complement(join(343339..343981,345450..345656,346991..347146))
location: region:343339-347146:-1
so has part: feature:346991-347146:-1:exon
so has part: feature:345450-345656:-1:exon
so has part: feature:343339-343981:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:346991-347146:-1:exon

position:346991:-1
position: 346991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:345450-345656:-1:exon

position:345450:-1
position: 345450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345656:-1
position: 345656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:343339-343981:-1:exon

position:343981:-1
position: 343981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRGN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NRGN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogranin
translation: MDCCNEGACTKLDEDIMDIPLDDPDANAAAAKIQASFRGHMTRKKIKGGEMERKAKDAECANSTRGGDLRNGD
SIO_010081: NRGN
subclass of: SO_0000673
so part of: NRGN
location: complement(join(345450..345656,346991..347005))
location: region:345450-347005:-1
so has part: feature:346991-347005:-1:exon
so has part: feature:345450-345656:-1:exon

XP_010721861.1
type: Protein
SIO_000068: ncbiprotein

position:347005:-1
position: 347005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:346991-347005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:345450-345656:-1:exon

PANX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(352286..356318)
location: region:352286-356318:-1
so has part: feature:352286-356318:-1:exon
subclass of: SO_0000010

100543697
type: Gene
SIO_000068: ncbigene

position:352286:-1
position: 352286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356318:-1
position: 356318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352286-356318:-1:exon

PANX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PANX3
product: pannexin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 170 samples with support for all annotated introns
transcript id: XM_019622942.1
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(352286..352423,353263..353906,354027..354241,354410..354552,355259..356318))
location: region:352286-356318:-1
so has part: feature:355259-356318:-1:exon
so has part: feature:354410-354552:-1:exon
so has part: feature:354027-354241:-1:exon
so has part: feature:353263-353906:-1:exon
so has part: feature:352286-352423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355259-356318:-1:exon

position:355259:-1
position: 355259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354410-354552:-1:exon

position:354410:-1
position: 354410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354552:-1
position: 354552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:354027-354241:-1:exon

position:354027:-1
position: 354027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354241:-1
position: 354241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:353263-353906:-1:exon

position:353263:-1
position: 353263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:353906:-1
position: 353906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:352286-352423:-1:exon

position:352423:-1
position: 352423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pannexin-3 isoform X1
translation: MSLSHTAAEYMLSDALLPEPSSSRAKGLRLELPSDRVLKFIAVGLPLFLVSLAFAREFSAGSQISCFSPSNFTGKQSAYADTACWDSLLHHGFDAEGRAVTKSLWALKVFPYSLLVVAVLMYLPYLLWRYAASPALHSDLLFIIDELDKSYNRSVRLVQHMRKVQQASDDPEQFWEEYERARQERYFEFPLLERYLARKQHSHSLVIIYLLRNLLLLLFLAATCLYLVFLHLNIFFQDEFSCSIKTGLLQDEPHVPPLIPCKLVFFSVFQLISLTVGGVYVLLMPVVVYSALQLCQWDKGLLSVYEMLPAFDLLSRKMLTCPVNDLNVILLFLRANISELTSFSRLNAVSALREASAEKQDIDTVVDFMTLLAGLEATKPKHQACMPLGNGEAIDMKPGAEAKDEDAHDS
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(352374..352423,353263..353906,354027..354241,354410..354552,355259..355439))
location: region:352374-355439:-1
so has part: feature:355259-355439:-1:exon
so has part: feature:354410-354552:-1:exon
so has part: feature:354027-354241:-1:exon
so has part: feature:353263-353906:-1:exon
so has part: feature:352374-352423:-1:exon

XP_019478487.1
type: Protein
SIO_000068: ncbiprotein

position:352374:-1
position: 352374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:355439:-1
position: 355439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355259-355439:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354410-354552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354027-354241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353263-353906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352374-352423:-1:exon

PANX3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PANX3
product: pannexin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019622943.1
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(352431..353056,353263..353906,354027..354241,354410..354552,355259..356318))
location: region:352431-356318:-1
so has part: feature:355259-356318:-1:exon
so has part: feature:354410-354552:-1:exon
so has part: feature:354027-354241:-1:exon
so has part: feature:353263-353906:-1:exon
so has part: feature:352431-353056:-1:exon

position:352431:-1
position: 352431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355259-356318:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354410-354552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354027-354241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353263-353906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352431-353056:-1:exon

position:353056:-1
position: 353056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PANX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PANX3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pannexin-3 isoform X2
translation: MSLSHTAAEYMLSDALLPEPSSSRAKGLRLELPSDRVLKFIAVGLPLFLVSLAFAREFSAGSQISCFSPSNFTGKQSAYADTACWDSLLHHGFDAEGRAVTKSLWALKVFPYSLLVVAVLMYLPYLLWRYAASPALHSDLLFIIDELDKSYNRSVRLVQHMRKVQQASDDPEQFWEEYERARQERYFEFPLLERYLARKQHSHSLVIIYLLRNLLLLLFLAATCLYLVFLHLNIFFQDEFSCSIKTGLLQDEPHVPPLIPCKLVFFSVFQLISLTVGGVYVLLMPVVVYSALQLCQWDKGLLSVYEMLPAFDLLSRKMLTCPVNDLNVILLFLRANISELTSFSRLNAVSALREASAEKQDIDTVVDFMTLLAGLEATKPKHQACMPLGNGEAIGTGSGSQGRDAATSPCVGRSCYRNSFAEKTAELEA
SIO_010081: PANX3
subclass of: SO_0000673
so part of: PANX3
location: complement(join(352950..353056,353263..353906,354027..354241,354410..354552,355259..355439))
location: region:352950-355439:-1
so has part: feature:355259-355439:-1:exon
so has part: feature:354410-354552:-1:exon
so has part: feature:354027-354241:-1:exon
so has part: feature:353263-353906:-1:exon
so has part: feature:352950-353056:-1:exon

XP_019478488.1
type: Protein
SIO_000068: ncbiprotein

position:352950:-1
position: 352950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355259-355439:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354410-354552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:354027-354241:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:353263-353906:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:352950-353056:-1:exon

PUS3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(356583..366140)
location: region:356583-366140:-1
so has part: feature:356583-366140:-1:exon
subclass of: SO_0000010

100543853
type: Gene
SIO_000068: ncbigene

position:356583:-1
position: 356583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366140:-1
position: 366140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356583-366140:-1:exon

PUS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PUS3
product: pseudouridine synthase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019622906.2
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: complement(join(356583..357119,357267..357364,357600..357750,357828..357921,358442..358643,359600..359753,359822..359887,360294..360502,361126..361316,361625..362193,363266..363694,366092..366140))
location: region:356583-366140:-1
so has part: feature:366092-366140:-1:exon
so has part: feature:363266-363694:-1:exon
so has part: feature:361625-362193:-1:exon
so has part: feature:361126-361316:-1:exon
so has part: feature:360294-360502:-1:exon
so has part: feature:359822-359887:-1:exon
so has part: feature:359600-359753:-1:exon
so has part: feature:358442-358643:-1:exon
so has part: feature:357828-357921:-1:exon
so has part: feature:357600-357750:-1:exon
so has part: feature:357267-357364:-1:exon
so has part: feature:356583-357119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366092-366140:-1:exon

position:366092:-1
position: 366092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:363266-363694:-1:exon

position:363266:-1
position: 363266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363694:-1
position: 363694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:361625-362193:-1:exon

position:361625:-1
position: 361625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362193:-1
position: 362193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:361126-361316:-1:exon

position:361126:-1
position: 361126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361316:-1
position: 361316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:360294-360502:-1:exon

position:360294:-1
position: 360294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:360502:-1
position: 360502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:359822-359887:-1:exon

position:359822:-1
position: 359822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359887:-1
position: 359887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:359600-359753:-1:exon

position:359600:-1
position: 359600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359753:-1
position: 359753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:358442-358643:-1:exon

position:358442:-1
position: 358442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358643:-1
position: 358643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:357828-357921:-1:exon

position:357828:-1
position: 357828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357921:-1
position: 357921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:357600-357750:-1:exon

position:357600:-1
position: 357600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357750:-1
position: 357750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:357267-357364:-1:exon

position:357267:-1
position: 357267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357364:-1
position: 357364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:356583-357119:-1:exon

position:357119:-1
position: 357119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PUS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PUS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA pseudouridine(38/39) synthase
translation: MANGSWATDREQLLRRVQDLEEEVKQLQEKLSEGKEGTAVKDTPSTSRKSKQQRPFDFSAHGRRHVALRIAYLGWGYQGFASQENTSNTIEEKLFEALKKTRLVDSRQTSNYHRCGRTDKGVSAFGQVISLDLRSNLSKEKKLNGCTGDSEGKSSKSEEELRYTHILNRVLPPDIRVLAWAPVEPDFSARFSCLKRTYRYFFPCADLDVALMQAAAQRYVGTHDFRNLCKMDVANGVINFQRTILSAQVTWVDGGAEGGLRDPFRLCQFEVTGQAFLYHQVRCMMAILFLIGQRMEGPEIIDELLDVEKNPRKPQYSMAVEFPLVLYDCEFENIQWHYDQEVQEFNITHLQQLWASYAVKTQVLHDMLRGLDAAPVAAGKDPGNAAPVLWGDLKPPVHNQASSFVEGVRARAYKPLLERPRCEGLESRIQQCLRRGRGQAERAAKRLRTGLAERLRAKRSEEKKKKEEEQREVAVEPARRRARQLAALQRVHHNVLAKALRQRIVYQNEELVVLNKPYGLPVHGGPGVKNCIADVLPILAKMLMNMKAEPLHLCHRLDKETTGLMVLARSREVADRIRLLFKTRQVEKIYWAISVGSPDPAEGIVEIPMVEREVQSHQPHYKMTLAPNYRMSPEDGKVLKIRKNRNAENAVTRYRVLATSSACSLLELQPITGVKHQLRVHLAYGLGCPILGDHKYSHWSKLAPQKLPEITLKRLKLQQSKSRHLPLHLHAYRLSLPLGTGGSKQTDLVCEPPSFFHRTLRQLELDIAKE
SIO_010081: PUS3
subclass of: SO_0000673
so part of: PUS3
location: complement(join(356922..357119,357267..357364,357600..357750,357828..357921,358442..358643,359600..359753,359822..359887,360294..360502,361126..361316,361625..362193,363266..363646))
location: region:356922-363646:-1
so has part: feature:363266-363646:-1:exon
so has part: feature:361625-362193:-1:exon
so has part: feature:361126-361316:-1:exon
so has part: feature:360294-360502:-1:exon
so has part: feature:359822-359887:-1:exon
so has part: feature:359600-359753:-1:exon
so has part: feature:358442-358643:-1:exon
so has part: feature:357828-357921:-1:exon
so has part: feature:357600-357750:-1:exon
so has part: feature:357267-357364:-1:exon
so has part: feature:356922-357119:-1:exon

XP_019478451.1
type: Protein
SIO_000068: ncbiprotein

position:356922:-1
position: 356922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363646:-1
position: 363646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363266-363646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361625-362193:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361126-361316:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360294-360502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:359822-359887:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:359600-359753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:358442-358643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:357828-357921:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:357600-357750:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357267-357364:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:356922-357119:-1:exon

HYLS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 361138..365870
location: region:361138-365870:1
so has part: feature:361138-365870:1:exon
subclass of: SO_0000010

104914339
type: Gene
SIO_000068: ncbigene

position:361138:1
position: 361138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365870:1
position: 365870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361138-365870:1:exon

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 207 samples with support for all annotated introns
transcript id: XM_010723560.2
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: join(361138..361219,364665..365870)
location: region:361138-365870:1
so has part: feature:361138-361219:1:exon
so has part: feature:364665-365870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361138-361219:1:exon

position:361219:1
position: 361219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364665-365870:1:exon

position:364665:1
position: 364665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019622945.1
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: join(361899..361980,364665..365870)
location: region:361899-365870:1
so has part: feature:361899-361980:1:exon
so has part: feature:364665-365870:1:exon

position:361899:1
position: 361899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361899-361980:1:exon

position:361980:1
position: 361980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364665-365870:1:exon

HYLS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HYLS1
product: HYLS1 centriolar and ciliogenesis associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019622944.1
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: join(361967..362057,364665..365870)
location: region:361967-365870:1
so has part: feature:361967-362057:1:exon
so has part: feature:364665-365870:1:exon

position:361967:1
position: 361967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361967-362057:1:exon

position:362057:1
position: 362057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:364665-365870:1:exon

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrolethalus syndrome protein 1
translation: MENRLEADRHSGAALSDEELEGGSESRGAEGEPLCCSAYTAPAGLQPAPPPSEGLPCAEPCAAPWCPKGSRRQVMKRKVLRRRPDGGVQVCDESVTSLLESTATWNLTQKMLQLSTSPDDSLSEGEIEMSSSFFQEFPPEPSYQHQGAERDPPFLLRVVQSQSPPTSHCTATAVQPKSFIPPRLEALRQNRSKSDRVAKYFEYKREWERFPVPGEDQHKDVRCSIRGRMLTQHSHPSKPQHTYVPNTYTVPTDKKRAALRWEVRWDLANGLIPRKNTPL
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: 364689..365528
location: region:364689-365528:1
so has part: feature:364689-365528:1:exon

XP_019478489.1
type: Protein
SIO_000068: ncbiprotein

position:364689:1
position: 364689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365528:1
position: 365528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364689-365528:1:exon

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrolethalus syndrome protein 1
translation: MENRLEADRHSGAALSDEELEGGSESRGAEGEPLCCSAYTAPAGLQPAPPPSEGLPCAEPCAAPWCPKGSRRQVMKRKVLRRRPDGGVQVCDESVTSLLESTATWNLTQKMLQLSTSPDDSLSEGEIEMSSSFFQEFPPEPSYQHQGAERDPPFLLRVVQSQSPPTSHCTATAVQPKSFIPPRLEALRQNRSKSDRVAKYFEYKREWERFPVPGEDQHKDVRCSIRGRMLTQHSHPSKPQHTYVPNTYTVPTDKKRAALRWEVRWDLANGLIPRKNTPL
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: 364689..365528
location: region:364689-365528:1
so has part: feature:364689-365528:1:exon

XP_019478490.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364689-365528:1:exon

HYLS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HYLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hydrolethalus syndrome protein 1
translation: MENRLEADRHSGAALSDEELEGGSESRGAEGEPLCCSAYTAPAGLQPAPPPSEGLPCAEPCAAPWCPKGSRRQVMKRKVLRRRPDGGVQVCDESVTSLLESTATWNLTQKMLQLSTSPDDSLSEGEIEMSSSFFQEFPPEPSYQHQGAERDPPFLLRVVQSQSPPTSHCTATAVQPKSFIPPRLEALRQNRSKSDRVAKYFEYKREWERFPVPGEDQHKDVRCSIRGRMLTQHSHPSKPQHTYVPNTYTVPTDKKRAALRWEVRWDLANGLIPRKNTPL
SIO_010081: HYLS1
subclass of: SO_0000673
so part of: HYLS1
location: 364689..365528
location: region:364689-365528:1
so has part: feature:364689-365528:1:exon

XP_010721862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:364689-365528:1:exon

VSIG10L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 367245..373323
location: region:367245-373323:1
so has part: feature:367245-373323:1:exon
subclass of: SO_0000010

109370982
type: Gene
SIO_000068: ncbigene

position:367245:1
position: 367245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373323:1
position: 373323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367245-373323:1:exon

VSIG10L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: VSIG10L2
product: V-set and immunoglobulin domain containing 10 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556838.1
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(367245..367289,367930..367978,368380..368664,369134..369409,369552..369836,370034..370294,370384..370421,372100..372175,372328..372567,372641..372665,372743..372855,372932..373323)
location: region:367245-373323:1
so has part: feature:367245-367289:1:exon
so has part: feature:367930-367978:1:exon
so has part: feature:368380-368664:1:exon
so has part: feature:369134-369409:1:exon
so has part: feature:369552-369836:1:exon
so has part: feature:370034-370294:1:exon
so has part: feature:370384-370421:1:exon
so has part: feature:372100-372175:1:exon
so has part: feature:372328-372567:1:exon
so has part: feature:372641-372665:1:exon
so has part: feature:372743-372855:1:exon
so has part: feature:372932-373323:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:367245-367289:1:exon

position:367289:1
position: 367289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:367930-367978:1:exon

position:367930:1
position: 367930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367978:1
position: 367978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:368380-368664:1:exon

position:368380:1
position: 368380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368664:1
position: 368664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:369134-369409:1:exon

position:369134:1
position: 369134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369409:1
position: 369409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:369552-369836:1:exon

position:369552:1
position: 369552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369836:1
position: 369836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:370034-370294:1:exon

position:370034:1
position: 370034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370294:1
position: 370294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:370384-370421:1:exon

position:370384:1
position: 370384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370421:1
position: 370421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:372100-372175:1:exon

position:372100:1
position: 372100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372175:1
position: 372175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:372328-372567:1:exon

position:372328:1
position: 372328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372567:1
position: 372567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:372641-372665:1:exon

position:372641:1
position: 372641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372665:1
position: 372665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:372743-372855:1:exon

position:372743:1
position: 372743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372855:1
position: 372855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:372932-373323:1:exon

position:372932:1
position: 372932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VSIG10L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: VSIG10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-set and immunoglobulin domain-containing protein 10-like 2
translation: MNPFFEGHCGCPMGAWGRLRVGYAAVMLRVLVPVSKPFVRLTAAAAAEGTEVALTCTVREGTAPLSFSWQHREPHGRLLAAPMGLGGSGAELLLAPANRSHAGWYACTARNEVNNRTSEPVYLDIVYGPDEPAISVEPFSPEQGSFSAGEREDVVLSCLAPSNPPSRYIWLHNGSQVHVGQTFVMSAIARGQAGTYTCLAENTHLQTRTQATIVLTVYYPPAGSPSCSAQATADLRDVALRCRWLGGFPPARLRWVGPREEETEEDDEEGAAGPSFSMATSIVPGAATRNGSSFACMAAHPALRDGAVCRTTLWIPAGSPTCMAAATKHDEYVMLRCRWEGGTPPATLRWWDGRGRALGVPTPSATVLVLSTDTSLRGQDFVCVAAHPLRAASTECRLRLDVPELEVERGEVAVQTPGEAGTGQHAVLLRHPWVVPGIGMPGAPLAPFSPGTSAPSRLLLTSSPPPSQRPDLHRSLPAEPPFEALPAVTGAAVMGMLVATSMSLLAVHYIARHRDRLPRLHELLFRMAGPDAPQLAEDANVAVSTEDGGQGQEEPGGLSTAAMEEEPRSAPPGDPVDDAPVDVSITVTAMP
SIO_010081: VSIG10L2
subclass of: SO_0000673
so part of: VSIG10L2
location: join(367245..367289,367930..367978,368380..368664,369134..369409,369552..369836,370034..370294,370384..370421,372100..372175,372328..372567,372641..372665,372743..372855,372932..373014)
location: region:367245-373014:1
so has part: feature:367245-367289:1:exon
so has part: feature:367930-367978:1:exon
so has part: feature:368380-368664:1:exon
so has part: feature:369134-369409:1:exon
so has part: feature:369552-369836:1:exon
so has part: feature:370034-370294:1:exon
so has part: feature:370384-370421:1:exon
so has part: feature:372100-372175:1:exon
so has part: feature:372328-372567:1:exon
so has part: feature:372641-372665:1:exon
so has part: feature:372743-372855:1:exon
so has part: feature:372932-373014:1:exon

XP_031412698.1
type: Protein
SIO_000068: ncbiprotein

position:373014:1
position: 373014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:367245-367289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367930-367978:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368380-368664:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369134-369409:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369552-369836:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370034-370294:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:370384-370421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:372100-372175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372328-372567:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:372641-372665:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:372743-372855:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:372932-373014:1:exon

CDON
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CDON
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(373662..408426)
location: region:373662-408426:-1
so has part: feature:373662-408426:-1:exon
subclass of: SO_0000010

100544002
type: Gene
SIO_000068: ncbigene

position:373662:-1
position: 373662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408426:-1
position: 408426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373662-408426:-1:exon

CDON
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CDON
product: cell adhesion associated, oncogene regulated
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556839.1
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(373662..375554,376123..376389,382060..382164,382774..382997,383879..384001,386438..386543,387431..387612,388236..388442,389472..389600,390101..390275,391879..392162,395896..396165,396905..396983,397647..397876,398126..398269,399012..399284,400706..400800,408214..408426))
location: region:373662-408426:-1
so has part: feature:408214-408426:-1:exon
so has part: feature:400706-400800:-1:exon
so has part: feature:399012-399284:-1:exon
so has part: feature:398126-398269:-1:exon
so has part: feature:397647-397876:-1:exon
so has part: feature:396905-396983:-1:exon
so has part: feature:395896-396165:-1:exon
so has part: feature:391879-392162:-1:exon
so has part: feature:390101-390275:-1:exon
so has part: feature:389472-389600:-1:exon
so has part: feature:388236-388442:-1:exon
so has part: feature:387431-387612:-1:exon
so has part: feature:386438-386543:-1:exon
so has part: feature:383879-384001:-1:exon
so has part: feature:382774-382997:-1:exon
so has part: feature:382060-382164:-1:exon
so has part: feature:376123-376389:-1:exon
so has part: feature:373662-375554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:408214-408426:-1:exon

position:408214:-1
position: 408214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400706-400800:-1:exon

position:400706:-1
position: 400706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400800:-1
position: 400800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:399012-399284:-1:exon

position:399012:-1
position: 399012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:399284:-1
position: 399284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:398126-398269:-1:exon

position:398126:-1
position: 398126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:398269:-1
position: 398269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:397647-397876:-1:exon

position:397647:-1
position: 397647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:397876:-1
position: 397876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:396905-396983:-1:exon

position:396905:-1
position: 396905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396983:-1
position: 396983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:395896-396165:-1:exon

position:395896:-1
position: 395896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:396165:-1
position: 396165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:391879-392162:-1:exon

position:391879:-1
position: 391879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:392162:-1
position: 392162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:390101-390275:-1:exon

position:390101:-1
position: 390101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390275:-1
position: 390275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:389472-389600:-1:exon

position:389472:-1
position: 389472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:389600:-1
position: 389600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:388236-388442:-1:exon

position:388236:-1
position: 388236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388442:-1
position: 388442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:387431-387612:-1:exon

position:387431:-1
position: 387431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387612:-1
position: 387612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:386438-386543:-1:exon

position:386438:-1
position: 386438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386543:-1
position: 386543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:383879-384001:-1:exon

position:383879:-1
position: 383879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384001:-1
position: 384001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:382774-382997:-1:exon

position:382774:-1
position: 382774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382997:-1
position: 382997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:382060-382164:-1:exon

position:382060:-1
position: 382060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382164:-1
position: 382164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:376123-376389:-1:exon

position:376123:-1
position: 376123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376389:-1
position: 376389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:373662-375554:-1:exon

position:375554:-1
position: 375554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDON
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CDON
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cell adhesion molecule-related/down-regulated by oncogenes
translation: MHSAPACLHALLAAALISASSSDLTPRFTSEPISAVQKPGGPVVLRCSAEPPTAGISWLLDGEPLGSGLPGVQIRHGSLSIASLSTATSGRYQCVASSSAGAVLSRAAVVSMGSLAHFAPSLTPVIVAEEGGTALVGCAVPQSNPRAQIRFRVRGKWLQPADRYLILPSGNLQILNVSMEDRGSYRCAAYNPVTHDLRIEPTGRKLVVTRECSAPQHECTWRERGAARPGAGCRVQGLDSGNYSCVVGGGPGEVAYVNYSLTVLEPVSISKGLQDETVAVGTTVSLRCAAHGSPAPALTWLHNAAPLRASPRHFLLGSSLQIRGVTMQDSGVYQCVADNGVGFAQSAGRLRVQAGAGPKAEATALTEAAQSDESRRDSGVEAAFPSSAPPKPPLDTAATDKAWGSISPPEAPIILSPPQTLSPDVYTLLWRSGRDGGLPINAYFVKYRKLDDAVSTAGGWHTVRVPGSENELRLSELEPSSLYEVLMVARSAAGEGQPAMLTFRTSKERTSSSKNTQAPSPPVGVPKQPVVHEGTNSFGVVLPDASRHSGVPEAPDRPTISTASESSVYVTWIPRANGGSPITAFKVEYRRVGRSSDWLIAADSISPSKLSVEVRSLEPGEMYKFRVIAVNNFGESPRSAASRPYQVAGFTHRFSSRPIAGPHIAYTEAISDTQIMLKWTYITSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGTKQWHLISHLQPETSYDIKMQCYNEGGESEYSNVMICETKVKRMPGVSEYPAKELSTPPSPPERXGGSGGPSSGPVRSSDMLYLIVGCVLGVMVLILIVFIAMCLWKNRQQNAMQKYDPPGYLYHGAEISGQVIKYTTLPGTSRVSGSVHAYILRCFTKANGTFSSSALPLVPIVAPCQQDSLEMKPLSHIMVAMCLASGIPEHGGRAEEDSTEPAEQPPSPQPCCRGSAGPLCLEHADGDSCALSETPNHVLSWSPLVLQPVPKDCRDKPGWTATLRGSGQPPLQES
SIO_010081: CDON
subclass of: SO_0000673
so part of: CDON
location: complement(join(375406..375554,376123..376389,382060..382164,382774..382997,383879..384001,386438..386543,387431..387612,388236..388442,389472..389600,390101..390275,391879..392162,395896..396165,396905..396983,397647..397876,398126..398269,399012..399284,400706..400772))
location: region:375406-400772:-1
so has part: feature:400706-400772:-1:exon
so has part: feature:399012-399284:-1:exon
so has part: feature:398126-398269:-1:exon
so has part: feature:397647-397876:-1:exon
so has part: feature:396905-396983:-1:exon
so has part: feature:395896-396165:-1:exon
so has part: feature:391879-392162:-1:exon
so has part: feature:390101-390275:-1:exon
so has part: feature:389472-389600:-1:exon
so has part: feature:388236-388442:-1:exon
so has part: feature:387431-387612:-1:exon
so has part: feature:386438-386543:-1:exon
so has part: feature:383879-384001:-1:exon
so has part: feature:382774-382997:-1:exon
so has part: feature:382060-382164:-1:exon
so has part: feature:376123-376389:-1:exon
so has part: feature:375406-375554:-1:exon

XP_031412699.1
type: Protein
SIO_000068: ncbiprotein

position:375406:-1
position: 375406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:400772:-1
position: 400772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400706-400772:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399012-399284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398126-398269:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397647-397876:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:396905-396983:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:395896-396165:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391879-392162:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:390101-390275:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:389472-389600:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388236-388442:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:387431-387612:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:386438-386543:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:383879-384001:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:382774-382997:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:382060-382164:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:376123-376389:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:375406-375554:-1:exon

CHEK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(425825..429200)
location: region:425825-429200:-1
so has part: feature:425825-429200:-1:exon
subclass of: SO_0000010

100547861
type: Gene
SIO_000068: ncbigene

position:425825:-1
position: 425825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429200:-1
position: 429200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425825-429200:-1:exon

CHEK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CHEK1
product: checkpoint kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 194 samples with support for all annotated introns
transcript id: XM_010723791.2
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(425825..426068,426267..426368,426435..426566,427102..427279,427485..427593,427665..427760,427829..427933,428266..428454,428529..428598,428671..428735,428840..429200))
location: region:425825-429200:-1
so has part: feature:428840-429200:-1:exon
so has part: feature:428671-428735:-1:exon
so has part: feature:428529-428598:-1:exon
so has part: feature:428266-428454:-1:exon
so has part: feature:427829-427933:-1:exon
so has part: feature:427665-427760:-1:exon
so has part: feature:427485-427593:-1:exon
so has part: feature:427102-427279:-1:exon
so has part: feature:426435-426566:-1:exon
so has part: feature:426267-426368:-1:exon
so has part: feature:425825-426068:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:428840-429200:-1:exon

position:428840:-1
position: 428840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428671-428735:-1:exon

position:428671:-1
position: 428671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428735:-1
position: 428735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428529-428598:-1:exon

position:428529:-1
position: 428529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428598:-1
position: 428598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:428266-428454:-1:exon

position:428266:-1
position: 428266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428454:-1
position: 428454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:427829-427933:-1:exon

position:427829:-1
position: 427829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427933:-1
position: 427933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:427665-427760:-1:exon

position:427665:-1
position: 427665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427760:-1
position: 427760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:427485-427593:-1:exon

position:427485:-1
position: 427485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427593:-1
position: 427593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:427102-427279:-1:exon

position:427102:-1
position: 427102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427279:-1
position: 427279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:426435-426566:-1:exon

position:426435:-1
position: 426435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426566:-1
position: 426566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:426267-426368:-1:exon

position:426267:-1
position: 426267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:426368:-1
position: 426368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:425825-426068:-1:exon

position:426068:-1
position: 426068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHEK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CHEK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Chk1
translation: MKRAADCPENIKKEICINKMLNHENVVKFYGHRREGATQYLFLEYCSGGELFDRIEPDIGMPEPEAQRFFQQLIAGVVYLHSMGITHRDLKPENLLLDERDNLKISDFGLATVFKHNGRERLLNKMCGTLPYVAPELLRRPEFRAEPVDVWACGVVLTAMLAGELPWDQPSDSCQEYSDWKERKTYLAPWRKIDSAPLALLHKILTESPTARITIPDIKKDRWFCRPLKKGTKRSRVSSGGVTESPGALPKHIRSDTDFSPVKGALGEDKASYSTSQPEPGTGGALWDSSMGSIDRLVQGISFSQPACPEHMLLNSQLLGTPGSSQNPWQRLVKRMTRFFTKLDADGSYRSLRDVCEKMGYGWKQSCTNQVTISTTDRRNNKLIFKVNLLEMESRILVDFRLSKGDGLEFKRHFLKIKGKLSDVVSSQKVWLPPP
SIO_010081: CHEK1
subclass of: SO_0000673
so part of: CHEK1
location: complement(join(425973..426068,426267..426368,426435..426566,427102..427279,427485..427593,427665..427760,427829..427933,428266..428454,428529..428598,428671..428735,428840..429005))
location: region:425973-429005:-1
so has part: feature:428840-429005:-1:exon
so has part: feature:428671-428735:-1:exon
so has part: feature:428529-428598:-1:exon
so has part: feature:428266-428454:-1:exon
so has part: feature:427829-427933:-1:exon
so has part: feature:427665-427760:-1:exon
so has part: feature:427485-427593:-1:exon
so has part: feature:427102-427279:-1:exon
so has part: feature:426435-426566:-1:exon
so has part: feature:426267-426368:-1:exon
so has part: feature:425973-426068:-1:exon

XP_010722093.2
type: Protein
SIO_000068: ncbiprotein

position:425973:-1
position: 425973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429005:-1
position: 429005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428840-429005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428671-428735:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428529-428598:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:428266-428454:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:427829-427933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427665-427760:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:427485-427593:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:427102-427279:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:426435-426566:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:426267-426368:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:425973-426068:-1:exon

STT3A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(429307..442893)
location: region:429307-442893:-1
so has part: feature:429307-442893:-1:exon
subclass of: SO_0000010

100544158
type: Gene
SIO_000068: ncbigene

position:429307:-1
position: 429307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442893:-1
position: 442893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429307-442893:-1:exon

STT3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STT3A
product: STT3 oligosaccharyltransferase complex catalytic subunit A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_010723561.2
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(429307..429462,429542..429657,429735..429923,429988..430090,430176..430292,430367..430555,430677..430832,431130..431221,431362..431517,431929..432109,432511..432675,432857..432963,433327..433417,433524..433669,433835..433956,434085..434145,434311..434435,434538..434616,441005..441009,442882..442893))
location: region:429307-442893:-1
so has part: feature:442882-442893:-1:exon
so has part: feature:441005-441009:-1:exon
so has part: feature:434538-434616:-1:exon
so has part: feature:434311-434435:-1:exon
so has part: feature:434085-434145:-1:exon
so has part: feature:433835-433956:-1:exon
so has part: feature:433524-433669:-1:exon
so has part: feature:433327-433417:-1:exon
so has part: feature:432857-432963:-1:exon
so has part: feature:432511-432675:-1:exon
so has part: feature:431929-432109:-1:exon
so has part: feature:431362-431517:-1:exon
so has part: feature:431130-431221:-1:exon
so has part: feature:430677-430832:-1:exon
so has part: feature:430367-430555:-1:exon
so has part: feature:430176-430292:-1:exon
so has part: feature:429988-430090:-1:exon
so has part: feature:429735-429923:-1:exon
so has part: feature:429542-429657:-1:exon
so has part: feature:429307-429462:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:442882-442893:-1:exon

position:442882:-1
position: 442882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441005-441009:-1:exon

position:441005:-1
position: 441005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441009:-1
position: 441009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:434538-434616:-1:exon

position:434538:-1
position: 434538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434616:-1
position: 434616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:434311-434435:-1:exon

position:434311:-1
position: 434311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434435:-1
position: 434435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:434085-434145:-1:exon

position:434085:-1
position: 434085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434145:-1
position: 434145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:433835-433956:-1:exon

position:433835:-1
position: 433835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433956:-1
position: 433956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:433524-433669:-1:exon

position:433524:-1
position: 433524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433669:-1
position: 433669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:433327-433417:-1:exon

position:433327:-1
position: 433327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433417:-1
position: 433417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:432857-432963:-1:exon

position:432857:-1
position: 432857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432963:-1
position: 432963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:432511-432675:-1:exon

position:432511:-1
position: 432511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432675:-1
position: 432675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:431929-432109:-1:exon

position:431929:-1
position: 431929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432109:-1
position: 432109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:431362-431517:-1:exon

position:431362:-1
position: 431362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431517:-1
position: 431517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:431130-431221:-1:exon

position:431130:-1
position: 431130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431221:-1
position: 431221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:430677-430832:-1:exon

position:430677:-1
position: 430677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430832:-1
position: 430832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:430367-430555:-1:exon

position:430367:-1
position: 430367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430555:-1
position: 430555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:430176-430292:-1:exon

position:430176:-1
position: 430176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430292:-1
position: 430292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:429988-430090:-1:exon

position:429988:-1
position: 429988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430090:-1
position: 430090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:429735-429923:-1:exon

position:429735:-1
position: 429735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429923:-1
position: 429923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:429542-429657:-1:exon

position:429542:-1
position: 429542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429657:-1
position: 429657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:429307-429462:-1:exon

position:429462:-1
position: 429462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STT3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STT3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A
translation: MTKLGFLRLSYEKQDTLLKLLILSMAAVLSFSTRLFSVLRFESVIHEFDPYFNYRTTRFLAEEGFYKFHNWFDDRAWYPLGRIIGGTIYPGLMITSAAIYHVLHFFHITIDIRNVCVFLAPLFSSFTTIVTYHLTKELKDAGAGLLAAAMIAVVPGYISRSVAGSYDNEGIAIFCMLLTYYMWIKAVKTGSIYWAAMCALAYFYMVSSWGGYVFLINLIPLHVLVLMLTGRFSHRIYVAYCTVYCLGTILSMQISFVGFQPVLSSEHMAALGVFGLCQIHAFVDYLRSKLNPQQFEVLFRSVISLVGFVLLTVGAVLMLTGKISPWTGRFYSLLDPSYAKNNIPIIASVSEHQPTTWSSYYFDLQLLVFMFPVGLYYCFSNLSDARIFIIMYGVTSMYFSAVMVRLMLVLAPVMCILSGIGVSQVLSTYMKNLDISRPDKKSKKQQDSTYPIKNEVASGMILVMAFFLITYTFHSTWVTSEAYSSPSIVLSARGGDGSRIIFDDFREAYYWLRHNTPEDAKVMSWWDYGYQITAMANRTILVDNNTWNNTHISRVGQAMASTEEKAYEIMRELDVSYVLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGRHIKEHDYYTPTGEFRVDREGSPVLLNCLMYKMCYYRFGQVYTEAKRPPGYDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDLDNRGLSRT
SIO_010081: STT3A
subclass of: SO_0000673
so part of: STT3A
location: complement(join(429424..429462,429542..429657,429735..429923,429988..430090,430176..430292,430367..430555,430677..430832,431130..431221,431362..431517,431929..432109,432511..432675,432857..432963,433327..433417,433524..433669,433835..433956,434085..434145,434311..434398))
location: region:429424-434398:-1
so has part: feature:434311-434398:-1:exon
so has part: feature:434085-434145:-1:exon
so has part: feature:433835-433956:-1:exon
so has part: feature:433524-433669:-1:exon
so has part: feature:433327-433417:-1:exon
so has part: feature:432857-432963:-1:exon
so has part: feature:432511-432675:-1:exon
so has part: feature:431929-432109:-1:exon
so has part: feature:431362-431517:-1:exon
so has part: feature:431130-431221:-1:exon
so has part: feature:430677-430832:-1:exon
so has part: feature:430367-430555:-1:exon
so has part: feature:430176-430292:-1:exon
so has part: feature:429988-430090:-1:exon
so has part: feature:429735-429923:-1:exon
so has part: feature:429542-429657:-1:exon
so has part: feature:429424-429462:-1:exon

XP_010721863.1
type: Protein
SIO_000068: ncbiprotein

position:429424:-1
position: 429424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434398:-1
position: 434398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434311-434398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434085-434145:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:433835-433956:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433524-433669:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:433327-433417:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432857-432963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:432511-432675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:431929-432109:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:431362-431517:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:431130-431221:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:430677-430832:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:430367-430555:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:430176-430292:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:429988-430090:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:429735-429923:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:429542-429657:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:429424-429462:-1:exon

EI24
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(436332..443229)
location: region:436332-443229:-1
so has part: feature:436332-443229:-1:exon
subclass of: SO_0000010

100544313
type: Gene
SIO_000068: ncbigene

position:436332:-1
position: 436332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443229:-1
position: 443229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436332-443229:-1:exon

EI24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EI24
product: EI24 autophagy associated transmembrane protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010723562.3
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(436332..436626,436883..436957,437124..437235,437621..437732,437830..437949,438284..438408,438807..438873,439732..439792,440975..441120,443064..443229))
location: region:436332-443229:-1
so has part: feature:443064-443229:-1:exon
so has part: feature:440975-441120:-1:exon
so has part: feature:439732-439792:-1:exon
so has part: feature:438807-438873:-1:exon
so has part: feature:438284-438408:-1:exon
so has part: feature:437830-437949:-1:exon
so has part: feature:437621-437732:-1:exon
so has part: feature:437124-437235:-1:exon
so has part: feature:436883-436957:-1:exon
so has part: feature:436332-436626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:443064-443229:-1:exon

position:443064:-1
position: 443064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:440975-441120:-1:exon

position:440975:-1
position: 440975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441120:-1
position: 441120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:439732-439792:-1:exon

position:439732:-1
position: 439732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439792:-1
position: 439792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:438807-438873:-1:exon

position:438807:-1
position: 438807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438873:-1
position: 438873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:438284-438408:-1:exon

position:438284:-1
position: 438284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438408:-1
position: 438408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:437830-437949:-1:exon

position:437830:-1
position: 437830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437949:-1
position: 437949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:437621-437732:-1:exon

position:437621:-1
position: 437621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437732:-1
position: 437732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:437124-437235:-1:exon

position:437124:-1
position: 437124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437235:-1
position: 437235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:436883-436957:-1:exon

position:436883:-1
position: 436883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436957:-1
position: 436957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:436332-436626:-1:exon

position:436626:-1
position: 436626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EI24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EI24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: etoposide-induced protein 2.4 homolog
translation: MADSVKTFLHDLVRGIKDSIWGICTISKLDARIQQKREEQKRRRANSALAQRRFHMEERRQENEPRIVSRIFQCCAWNGGVFWLSLFLFYQVFIPVLQSVTAQIIGDPSLHGDVWSWLEFILTSIFSALWVLPLFVLSKVVNAIWFQDIADLAFEVSGRKPHPFPSVSKIIADMLFNLLLQALFLIQGMIVSLFPIDVVGQLISLLHMSLLYSLYCFEYRWFNKGIEMHQRLSNIERNWPYYFGFGLPLAFLTAMQSSYIISGCLFSILFPLFIISANEAKTPGKTYHFQLRLFSLVVFLSNRLFHKTVYLQSTLGSAPADRLLSPQPSPAKHKPAPGH
SIO_010081: EI24
subclass of: SO_0000673
so part of: EI24
location: complement(join(436467..436626,436883..436957,437124..437235,437621..437732,437830..437949,438284..438408,438807..438873,439732..439792,440975..441120,443064..443105))
location: region:436467-443105:-1
so has part: feature:443064-443105:-1:exon
so has part: feature:440975-441120:-1:exon
so has part: feature:439732-439792:-1:exon
so has part: feature:438807-438873:-1:exon
so has part: feature:438284-438408:-1:exon
so has part: feature:437830-437949:-1:exon
so has part: feature:437621-437732:-1:exon
so has part: feature:437124-437235:-1:exon
so has part: feature:436883-436957:-1:exon
so has part: feature:436467-436626:-1:exon

XP_010721864.1
type: Protein
SIO_000068: ncbiprotein

position:436467:-1
position: 436467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443105:-1
position: 443105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443064-443105:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:440975-441120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439732-439792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:438807-438873:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:438284-438408:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:437830-437949:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:437621-437732:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:437124-437235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:436883-436957:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:436467-436626:-1:exon

FOXRED1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(444166..>446799)
location: region:444166-446799:-1
so has part: feature:444166-446799:-1:exon
subclass of: SO_0000010

104914383
type: Gene
SIO_000068: ncbigene

position:444166:-1
position: 444166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446799:-1
position: 446799
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444166-446799:-1:exon

FOXRED1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FOXRED1
product: FAD dependent oxidoreductase domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010723792.2
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: complement(join(444166..444461,444538..444642,444717..444846,444932..445086,445196..445266,445337..445438,445513..445607,445684..445802,445893..446003,446095..446327,446748..>446799))
location: region:444166-446799:-1
so has part: feature:446748-446799:-1:exon
so has part: feature:446095-446327:-1:exon
so has part: feature:445893-446003:-1:exon
so has part: feature:445684-445802:-1:exon
so has part: feature:445513-445607:-1:exon
so has part: feature:445337-445438:-1:exon
so has part: feature:445196-445266:-1:exon
so has part: feature:444932-445086:-1:exon
so has part: feature:444717-444846:-1:exon
so has part: feature:444538-444642:-1:exon
so has part: feature:444166-444461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:446748-446799:-1:exon

position:446748:-1
position: 446748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446095-446327:-1:exon

position:446095:-1
position: 446095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446327:-1
position: 446327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445893-446003:-1:exon

position:445893:-1
position: 445893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:446003:-1
position: 446003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:445684-445802:-1:exon

position:445684:-1
position: 445684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445802:-1
position: 445802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:445513-445607:-1:exon

position:445513:-1
position: 445513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445607:-1
position: 445607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:445337-445438:-1:exon

position:445337:-1
position: 445337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445438:-1
position: 445438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:445196-445266:-1:exon

position:445196:-1
position: 445196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445266:-1
position: 445266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:444932-445086:-1:exon

position:444932:-1
position: 444932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445086:-1
position: 445086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:444717-444846:-1:exon

position:444717:-1
position: 444717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444846:-1
position: 444846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:444538-444642:-1:exon

position:444538:-1
position: 444538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444642:-1
position: 444642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:444166-444461:-1:exon

position:444461:-1
position: 444461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOXRED1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FOXRED1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FAD-dependent oxidoreductase domain-containing protein 1
translation: LGRTLRTAVPQRSDIFRELGPRLSRLGQTLRDQLPESEGAWNPLHSHQICPPPPERADVVVAGGGVLGWSVAYWLKTLENRRHGMRVVVVERDPTYSQASTVLSVGGIRQQFSLPENIRLSLQSATFLRTINEHLWVPNEPPIDLQFQPSGYLFLASEHGAATLEAGIKVQREEGAKVVLLSPSQLKAKFPWINTENVAVASYGLENEGWFDPWSLLNAFRRKAMSLGVYSCVGEVTSFVTDTADNTPGMPLGVGRVKYVNVRLPDSPEQQPVSCAIVVVAAGAWTGKLLDSATAGLRGSLALSPLPIEPRKRYVYVWHCPGGPGLETPFVIDTSGAYFRREGIAGNYLGSMSPPEGREPDTGNLEVDHDFFQEEVWPRLAHRVPAFQSLKVKSAWAGYYDYNTFDQNGVLGPHPQLQNIFVLGGFSGHGLQQSPAAGKAAAELLLYGSCTAVDVSRLAPGRLWGSEPLLEAAIV
SIO_010081: FOXRED1
subclass of: SO_0000673
so part of: FOXRED1
location: complement(join(444207..444461,444538..444642,444717..444846,444932..445086,445196..445266,445337..445438,445513..445607,445684..445802,445893..446003,446095..446327,446748..>446799))
location: region:444207-446799:-1
so has part: feature:446748-446799:-1:exon
so has part: feature:446095-446327:-1:exon
so has part: feature:445893-446003:-1:exon
so has part: feature:445684-445802:-1:exon
so has part: feature:445513-445607:-1:exon
so has part: feature:445337-445438:-1:exon
so has part: feature:445196-445266:-1:exon
so has part: feature:444932-445086:-1:exon
so has part: feature:444717-444846:-1:exon
so has part: feature:444538-444642:-1:exon
so has part: feature:444207-444461:-1:exon

XP_010722094.1
type: Protein
SIO_000068: ncbiprotein

position:444207:-1
position: 444207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446748-446799:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:446095-446327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445893-446003:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:445684-445802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:445513-445607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:445337-445438:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:445196-445266:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:444932-445086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:444717-444846:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444538-444642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:444207-444461:-1:exon

SRPRA
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SRPRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <447804..455410
location: region:447804-455410:1
so has part: feature:447804-455410:1:exon
subclass of: SO_0000010

100544470
type: Gene
SIO_000068: ncbigene

position:447804:1
position: 447804
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:455410:1
position: 455410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447804-455410:1:exon

SRPRA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SRPRA
product: SRP receptor subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010723793.3
SIO_010081: SRPRA
subclass of: SO_0000673
so part of: SRPRA
location: join(<447804..447887,449297..449460,449683..449843,450412..450565,451006..451159,451510..451616,451814..451932,452124..452210,452390..452562,452647..452860,452942..453105,453220..453318,454142..455410)
location: region:447804-455410:1
so has part: feature:447804-447887:1:exon
so has part: feature:449297-449460:1:exon
so has part: feature:449683-449843:1:exon
so has part: feature:450412-450565:1:exon
so has part: feature:451006-451159:1:exon
so has part: feature:451510-451616:1:exon
so has part: feature:451814-451932:1:exon
so has part: feature:452124-452210:1:exon
so has part: feature:452390-452562:1:exon
so has part: feature:452647-452860:1:exon
so has part: feature:452942-453105:1:exon
so has part: feature:453220-453318:1:exon
so has part: feature:454142-455410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:447804-447887:1:exon

position:447887:1
position: 447887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:449297-449460:1:exon

position:449297:1
position: 449297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449460:1
position: 449460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449683-449843:1:exon

position:449683:1
position: 449683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449843:1
position: 449843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:450412-450565:1:exon

position:450412:1
position: 450412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450565:1
position: 450565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:451006-451159:1:exon

position:451006:1
position: 451006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451159:1
position: 451159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:451510-451616:1:exon

position:451510:1
position: 451510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451616:1
position: 451616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:451814-451932:1:exon

position:451814:1
position: 451814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451932:1
position: 451932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:452124-452210:1:exon

position:452124:1
position: 452124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452210:1
position: 452210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:452390-452562:1:exon

position:452390:1
position: 452390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452562:1
position: 452562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:452647-452860:1:exon

position:452647:1
position: 452647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452860:1
position: 452860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:452942-453105:1:exon

position:452942:1
position: 452942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453105:1
position: 453105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:453220-453318:1:exon

position:453220:1
position: 453220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453318:1
position: 453318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:454142-455410:1:exon

position:454142:1
position: 454142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRPRA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SRPRA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal recognition particle receptor subunit alpha
translation: ERGGNNSFTHEALTLKYKLDNQFELVFVVGFQKILTLTYVDKLIDDVHKEFRDKYRNEFQQKGALGILNGTFDFKDDFLRLLREAEESSKVRAPTVMKTFEQSMKSQKTVKCMIETRGEKPKEKVKNKKNKGSKKEGNEAVTVSSKAAPGEKQSSATGDKEELTKDEILQKNREEFFKRHMKAGEKSSKSSKPDAQKEKGKKPRVWDLGNSNAKVLDYSNSTTNGNSEASPVEEFDPDMALRDRNREPGRLYDLEYESDEEAEEEKIIQNTSKPSTKKGGLGGMFGMLKGLVGSKSLTRQDMDPVLEKMKDHLIAKNVAAEIAVQLCESVAKKLEGKVMGTFTTVTSTVKQALQEALVQILQPQRRVDVLRDVMDAQRHRRPYVVTFCGVNGVGKSTNLAKISFWLIENGFSVLIAACDTFRAGAVEQLRTHTRRLNALHPPESHGGRSMVQLYEKGYGKDAAGIAMEAISYARNQGFDVVLVDTAGRMQDNAPLMTALAKLIAVNAPDLVLFVGEALVGNEAVDQLVKFNKALADHSMAQTPRLIDGIVLTKFDTIDDKVGAAISMTYITSKPIVFVGTGQTYCDLRSLNAKAVVAALMKA
SIO_010081: SRPRA
subclass of: SO_0000673
so part of: SRPRA
location: join(<447804..447887,449297..449460,449683..449843,450412..450565,451006..451159,451510..451616,451814..451932,452124..452210,452390..452562,452647..452860,452942..453105,453220..453318,454142..454270)
location: region:447804-454270:1
so has part: feature:447804-447887:1:exon
so has part: feature:449297-449460:1:exon
so has part: feature:449683-449843:1:exon
so has part: feature:450412-450565:1:exon
so has part: feature:451006-451159:1:exon
so has part: feature:451510-451616:1:exon
so has part: feature:451814-451932:1:exon
so has part: feature:452124-452210:1:exon
so has part: feature:452390-452562:1:exon
so has part: feature:452647-452860:1:exon
so has part: feature:452942-453105:1:exon
so has part: feature:453220-453318:1:exon
so has part: feature:454142-454270:1:exon

XP_010722095.1
type: Protein
SIO_000068: ncbiprotein

position:454270:1
position: 454270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:447804-447887:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449297-449460:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449683-449843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450412-450565:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:451006-451159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451510-451616:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451814-451932:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452124-452210:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452390-452562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452647-452860:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452942-453105:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:453220-453318:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454142-454270:1:exon

FAM118B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(455513..464066)
location: region:455513-464066:-1
so has part: feature:455513-464066:-1:exon
subclass of: SO_0000010

100544627
type: Gene
SIO_000068: ncbigene

position:455513:-1
position: 455513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464066:-1
position: 464066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455513-464066:-1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_010723572.3
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(455513..455955,456230..456289,456851..457136,457248..457376,458680..458907,459485..459737,460454..460531,463980..464066))
location: region:455513-464066:-1
so has part: feature:463980-464066:-1:exon
so has part: feature:460454-460531:-1:exon
so has part: feature:459485-459737:-1:exon
so has part: feature:458680-458907:-1:exon
so has part: feature:457248-457376:-1:exon
so has part: feature:456851-457136:-1:exon
so has part: feature:456230-456289:-1:exon
so has part: feature:455513-455955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463980-464066:-1:exon

position:463980:-1
position: 463980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:460454-460531:-1:exon

position:460454:-1
position: 460454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460531:-1
position: 460531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:459485-459737:-1:exon

position:459485:-1
position: 459485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459737:-1
position: 459737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:458680-458907:-1:exon

position:458680:-1
position: 458680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458907:-1
position: 458907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:457248-457376:-1:exon

position:457248:-1
position: 457248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457376:-1
position: 457376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:456851-457136:-1:exon

position:456851:-1
position: 456851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457136:-1
position: 457136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:456230-456289:-1:exon

position:456230:-1
position: 456230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456289:-1
position: 456289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:455513-455955:-1:exon

position:455955:-1
position: 455955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_010723571.3
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(455513..455955,456230..456289,456851..457136,457248..457376,458680..458907,459485..459737,460454..460531,462448..462671,463145..463189))
location: region:455513-463189:-1
so has part: feature:463145-463189:-1:exon
so has part: feature:462448-462671:-1:exon
so has part: feature:460454-460531:-1:exon
so has part: feature:459485-459737:-1:exon
so has part: feature:458680-458907:-1:exon
so has part: feature:457248-457376:-1:exon
so has part: feature:456851-457136:-1:exon
so has part: feature:456230-456289:-1:exon
so has part: feature:455513-455955:-1:exon

position:463189:-1
position: 463189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463145-463189:-1:exon

position:463145:-1
position: 463145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:462448-462671:-1:exon

position:462448:-1
position: 462448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:462671:-1
position: 462671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460454-460531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:459485-459737:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:458680-458907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:457248-457376:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456851-457136:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456230-456289:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:455513-455955:-1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010723574.3
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(455513..455955,456230..456289,456851..457136,457248..457376,458680..458907,459485..459737,460454..460531,463145..463182))
location: region:455513-463182:-1
so has part: feature:463145-463182:-1:exon
so has part: feature:460454-460531:-1:exon
so has part: feature:459485-459737:-1:exon
so has part: feature:458680-458907:-1:exon
so has part: feature:457248-457376:-1:exon
so has part: feature:456851-457136:-1:exon
so has part: feature:456230-456289:-1:exon
so has part: feature:455513-455955:-1:exon

position:463182:-1
position: 463182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463145-463182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460454-460531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459485-459737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:458680-458907:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457248-457376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456851-457136:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456230-456289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455513-455955:-1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 213 samples with support for all annotated introns
transcript id: XM_031556856.1
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(455513..455955,456230..456289,456851..457136,457248..457376,458680..458907,459485..459737,460454..460531,462448..462882))
location: region:455513-462882:-1
so has part: feature:462448-462882:-1:exon
so has part: feature:460454-460531:-1:exon
so has part: feature:459485-459737:-1:exon
so has part: feature:458680-458907:-1:exon
so has part: feature:457248-457376:-1:exon
so has part: feature:456851-457136:-1:exon
so has part: feature:456230-456289:-1:exon
so has part: feature:455513-455955:-1:exon

position:462882:-1
position: 462882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462448-462882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460454-460531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459485-459737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:458680-458907:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457248-457376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456851-457136:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456230-456289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455513-455955:-1:exon

FAM118B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FAM118B
product: family with sequence similarity 118 member B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_010723573.3
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(455513..455955,456230..456289,456851..457136,457248..457376,458680..458907,459485..459737,460454..460531,460660..462419))
location: region:455513-462419:-1
so has part: feature:460660-462419:-1:exon
so has part: feature:460454-460531:-1:exon
so has part: feature:459485-459737:-1:exon
so has part: feature:458680-458907:-1:exon
so has part: feature:457248-457376:-1:exon
so has part: feature:456851-457136:-1:exon
so has part: feature:456230-456289:-1:exon
so has part: feature:455513-455955:-1:exon

position:462419:-1
position: 462419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460660-462419:-1:exon

position:460660:-1
position: 460660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:460454-460531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:459485-459737:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:458680-458907:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:457248-457376:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456851-457136:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456230-456289:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:455513-455955:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKETLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEYKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAAHQGKHLESLDLTDEKKVLEWAQEKRQLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMREIQKLYENKSFLFLGCGWTVDDTTFQALFLEAEKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYTDLPEYFGRLASEIATRGRAGVLKEGQQLNGSAAAHTEITGCST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(455942..455955,456230..456289,456851..457136,457248..457376,458680..458907,459485..459737,460454..460524))
location: region:455942-460524:-1
so has part: feature:460454-460524:-1:exon
so has part: feature:459485-459737:-1:exon
so has part: feature:458680-458907:-1:exon
so has part: feature:457248-457376:-1:exon
so has part: feature:456851-457136:-1:exon
so has part: feature:456230-456289:-1:exon
so has part: feature:455942-455955:-1:exon

XP_031412716.1
type: Protein
SIO_000068: ncbiprotein

position:455942:-1
position: 455942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460524:-1
position: 460524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460454-460524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459485-459737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458680-458907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457248-457376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456851-457136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456230-456289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455942-455955:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKETLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEYKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAAHQGKHLESLDLTDEKKVLEWAQEKRQLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMREIQKLYENKSFLFLGCGWTVDDTTFQALFLEAEKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYTDLPEYFGRLASEIATRGRAGVLKEGQQLNGSAAAHTEITGCST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(455942..455955,456230..456289,456851..457136,457248..457376,458680..458907,459485..459737,460454..460524))
location: region:455942-460524:-1
so has part: feature:460454-460524:-1:exon
so has part: feature:459485-459737:-1:exon
so has part: feature:458680-458907:-1:exon
so has part: feature:457248-457376:-1:exon
so has part: feature:456851-457136:-1:exon
so has part: feature:456230-456289:-1:exon
so has part: feature:455942-455955:-1:exon

XP_010721873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460454-460524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459485-459737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458680-458907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457248-457376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456851-457136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456230-456289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455942-455955:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKETLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEYKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAAHQGKHLESLDLTDEKKVLEWAQEKRQLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMREIQKLYENKSFLFLGCGWTVDDTTFQALFLEAEKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYTDLPEYFGRLASEIATRGRAGVLKEGQQLNGSAAAHTEITGCST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(455942..455955,456230..456289,456851..457136,457248..457376,458680..458907,459485..459737,460454..460524))
location: region:455942-460524:-1
so has part: feature:460454-460524:-1:exon
so has part: feature:459485-459737:-1:exon
so has part: feature:458680-458907:-1:exon
so has part: feature:457248-457376:-1:exon
so has part: feature:456851-457136:-1:exon
so has part: feature:456230-456289:-1:exon
so has part: feature:455942-455955:-1:exon

XP_010721874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460454-460524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459485-459737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458680-458907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457248-457376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456851-457136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456230-456289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455942-455955:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKETLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEYKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAAHQGKHLESLDLTDEKKVLEWAQEKRQLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMREIQKLYENKSFLFLGCGWTVDDTTFQALFLEAEKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYTDLPEYFGRLASEIATRGRAGVLKEGQQLNGSAAAHTEITGCST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(455942..455955,456230..456289,456851..457136,457248..457376,458680..458907,459485..459737,460454..460524))
location: region:455942-460524:-1
so has part: feature:460454-460524:-1:exon
so has part: feature:459485-459737:-1:exon
so has part: feature:458680-458907:-1:exon
so has part: feature:457248-457376:-1:exon
so has part: feature:456851-457136:-1:exon
so has part: feature:456230-456289:-1:exon
so has part: feature:455942-455955:-1:exon

XP_010721875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460454-460524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459485-459737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458680-458907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457248-457376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456851-457136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456230-456289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455942-455955:-1:exon

FAM118B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FAM118B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM118B
translation: MASTVSLGKETLLEDGMPPAKKPRKLLPSLKTKKPRELVLVIGTGISAAVAPQVPALKSWKGLIQALLDAAIDFDLLEDEESKRFQKCLHEYKNLVHVAHDLIQKLSPRTSNVRSTFFKDCLYEVFDDLESKMEDSGKQLLQSVLHLMENGALVLTTNFDNLLELYAAHQGKHLESLDLTDEKKVLEWAQEKRQLSVLHIHGVYTNPSGIVLHPAGYQNVLRNTEVMREIQKLYENKSFLFLGCGWTVDDTTFQALFLEAEKHKSDLEHFMLVRRGDVDEFKKLRENMLDKGIKVISYGDEYTDLPEYFGRLASEIATRGRAGVLKEGQQLNGSAAAHTEITGCST
SIO_010081: FAM118B
subclass of: SO_0000673
so part of: FAM118B
location: complement(join(455942..455955,456230..456289,456851..457136,457248..457376,458680..458907,459485..459737,460454..460524))
location: region:455942-460524:-1
so has part: feature:460454-460524:-1:exon
so has part: feature:459485-459737:-1:exon
so has part: feature:458680-458907:-1:exon
so has part: feature:457248-457376:-1:exon
so has part: feature:456851-457136:-1:exon
so has part: feature:456230-456289:-1:exon
so has part: feature:455942-455955:-1:exon

XP_010721876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:460454-460524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:459485-459737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:458680-458907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457248-457376:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:456851-457136:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456230-456289:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:455942-455955:-1:exon

TIRAP
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 464001..467896
location: region:464001-467896:1
so has part: feature:464001-467896:1:exon
subclass of: SO_0000010

100544782
type: Gene
SIO_000068: ncbigene

position:464001:1
position: 464001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467896:1
position: 467896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464001-467896:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_010723565.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(464001..464076,465033..465113,465684..465761,465919..466050,466408..466462,466666..467277,467450..467896)
location: region:464001-467896:1
so has part: feature:464001-464076:1:exon
so has part: feature:465033-465113:1:exon
so has part: feature:465684-465761:1:exon
so has part: feature:465919-466050:1:exon
so has part: feature:466408-466462:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464001-464076:1:exon

position:464076:1
position: 464076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465033-465113:1:exon

position:465033:1
position: 465033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465113:1
position: 465113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465684-465761:1:exon

position:465684:1
position: 465684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465761:1
position: 465761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:465919-466050:1:exon

position:465919:1
position: 465919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466050:1
position: 466050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:466408-466462:1:exon

position:466408:1
position: 466408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466462:1
position: 466462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:466666-467277:1:exon

position:466666:1
position: 466666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467277:1
position: 467277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:467450-467896:1:exon

position:467450:1
position: 467450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010723569.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(464001..464076,465033..465113,465684..465761,466408..466462,466666..467277,467450..467896)
location: region:464001-467896:1
so has part: feature:464001-464076:1:exon
so has part: feature:465033-465113:1:exon
so has part: feature:465684-465761:1:exon
so has part: feature:466408-466462:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464001-464076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465033-465113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465684-465761:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466408-466462:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:467450-467896:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 175 samples with support for all annotated introns
transcript id: XM_010723567.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(464001..464076,465033..465113,466666..467277,467450..467896)
location: region:464001-467896:1
so has part: feature:464001-464076:1:exon
so has part: feature:465033-465113:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464001-464076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465033-465113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467450-467896:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 95 samples with support for all annotated introns
transcript id: XM_010723566.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(464001..464076,465036..465113,465684..465761,465919..466050,466408..466462,466666..467277,467450..467896)
location: region:464001-467896:1
so has part: feature:464001-464076:1:exon
so has part: feature:465036-465113:1:exon
so has part: feature:465684-465761:1:exon
so has part: feature:465919-466050:1:exon
so has part: feature:466408-466462:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464001-464076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465036-465113:1:exon

position:465036:1
position: 465036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465684-465761:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465919-466050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466408-466462:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:467450-467896:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 175 samples with support for all annotated introns
transcript id: XM_010723568.1
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(464001..464076,465036..465113,466666..467277,467450..467896)
location: region:464001-467896:1
so has part: feature:464001-464076:1:exon
so has part: feature:465036-465113:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464001-464076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:465036-465113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467450-467896:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 175 samples with support for all annotated introns
transcript id: XM_010723563.3
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(464179..465113,466666..467277,467450..467896)
location: region:464179-467896:1
so has part: feature:464179-465113:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467896:1:exon

position:464179:1
position: 464179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464179-465113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467450-467896:1:exon

TIRAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TIRAP
product: TIR domain containing adaptor protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_019622947.2
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(464179..464875,465033..465113,466666..467277,467450..467896)
location: region:464179-467896:1
so has part: feature:464179-464875:1:exon
so has part: feature:465033-465113:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467896:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464179-464875:1:exon

position:464875:1
position: 464875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465033-465113:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467450-467896:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X1
translation: MLPGLVSAPYEVEGDGFALLELHWVKEEAAGVTQLGHSRWILLGSRVNIFCLYLSHPEDPPAYLMLCCHPGLMQPLLCSDTRISGWFRRLLQKPKQSSIHTSSSSHSSTSHSLSSSPSSFSSSASAWSSSSSSSTSTAQPGRPAPVDISSSSARWAKSYDVCICHSEVDLEFVEELVSYLESQPQSLRCFLQLRDSVAGSAVMTELCEAVQNSHCWVMLITPSFLQDPWCRYQMHQALAEAPMANGRTIPVLKDIDRKDYPKELRNLYYIYTALKENSFRQIRDTVLRYLEELCRSSTSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(464861..465113,466666..467277,467450..467493)
location: region:464861-467493:1
so has part: feature:464861-465113:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467493:1:exon

XP_010721865.1
type: Protein
SIO_000068: ncbiprotein

position:464861:1
position: 464861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467493:1
position: 467493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464861-465113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467450-467493:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X3
translation: MLCCHPGLMQPLLCSDTRISGWFRRLLQKPKQSSIHTSSSSHSSTSHSLSSSPSSFSSSASAWSSSSSSSTSTAQPGRPAPVDISSSSARWAKSYDVCICHSEVDLEFVEELVSYLESQPQSLRCFLQLRDSVAGSAVMTELCEAVQNSHCWVMLITPSFLQDPWCRYQMHQALAEAPMANGRTIPVLKDIDRKDYPKELRNLYYIYTALKENSFRQIRDTVLRYLEELCRSSTSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(465053..465113,466666..467277,467450..467493)
location: region:465053-467493:1
so has part: feature:465053-465113:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467493:1:exon

XP_019478492.1
type: Protein
SIO_000068: ncbiprotein

position:465053:1
position: 465053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465053-465113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467450-467493:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X3
translation: MLCCHPGLMQPLLCSDTRISGWFRRLLQKPKQSSIHTSSSSHSSTSHSLSSSPSSFSSSASAWSSSSSSSTSTAQPGRPAPVDISSSSARWAKSYDVCICHSEVDLEFVEELVSYLESQPQSLRCFLQLRDSVAGSAVMTELCEAVQNSHCWVMLITPSFLQDPWCRYQMHQALAEAPMANGRTIPVLKDIDRKDYPKELRNLYYIYTALKENSFRQIRDTVLRYLEELCRSSTSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(465053..465113,466666..467277,467450..467493)
location: region:465053-467493:1
so has part: feature:465053-465113:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467493:1:exon

XP_010721869.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465053-465113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467450-467493:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X3
translation: MLCCHPGLMQPLLCSDTRISGWFRRLLQKPKQSSIHTSSSSHSSTSHSLSSSPSSFSSSASAWSSSSSSSTSTAQPGRPAPVDISSSSARWAKSYDVCICHSEVDLEFVEELVSYLESQPQSLRCFLQLRDSVAGSAVMTELCEAVQNSHCWVMLITPSFLQDPWCRYQMHQALAEAPMANGRTIPVLKDIDRKDYPKELRNLYYIYTALKENSFRQIRDTVLRYLEELCRSSTSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(465053..465113,466666..467277,467450..467493)
location: region:465053-467493:1
so has part: feature:465053-465113:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467493:1:exon

XP_010721870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465053-465113:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467450-467493:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X2
translation: MLLPQICLLQERFHAGAWRLSGALPVMAGWFRRLLQKPKQSSIHTSSSSHSSTSHSLSSSPSSFSSSASAWSSSSSSSTSTAQPGRPAPVDISSSSARWAKSYDVCICHSEVDLEFVEELVSYLESQPQSLRCFLQLRDSVAGSAVMTELCEAVQNSHCWVMLITPSFLQDPWCRYQMHQALAEAPMANGRTIPVLKDIDRKDYPKELRNLYYIYTALKENSFRQIRDTVLRYLEELCRSSTSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(466021..466050,466408..466462,466666..467277,467450..467493)
location: region:466021-467493:1
so has part: feature:466021-466050:1:exon
so has part: feature:466408-466462:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467493:1:exon

XP_010721867.1
type: Protein
SIO_000068: ncbiprotein

position:466021:1
position: 466021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466021-466050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466408-466462:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467450-467493:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X2
translation: MLLPQICLLQERFHAGAWRLSGALPVMAGWFRRLLQKPKQSSIHTSSSSHSSTSHSLSSSPSSFSSSASAWSSSSSSSTSTAQPGRPAPVDISSSSARWAKSYDVCICHSEVDLEFVEELVSYLESQPQSLRCFLQLRDSVAGSAVMTELCEAVQNSHCWVMLITPSFLQDPWCRYQMHQALAEAPMANGRTIPVLKDIDRKDYPKELRNLYYIYTALKENSFRQIRDTVLRYLEELCRSSTSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(466021..466050,466408..466462,466666..467277,467450..467493)
location: region:466021-467493:1
so has part: feature:466021-466050:1:exon
so has part: feature:466408-466462:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467493:1:exon

XP_010721868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466021-466050:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466408-466462:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:467450-467493:1:exon

TIRAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TIRAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: toll/interleukin-1 receptor domain-containing adapter protein isoform X4
translation: MAGWFRRLLQKPKQSSIHTSSSSHSSTSHSLSSSPSSFSSSASAWSSSSSSSTSTAQPGRPAPVDISSSSARWAKSYDVCICHSEVDLEFVEELVSYLESQPQSLRCFLQLRDSVAGSAVMTELCEAVQNSHCWVMLITPSFLQDPWCRYQMHQALAEAPMANGRTIPVLKDIDRKDYPKELRNLYYIYTALKENSFRQIRDTVLRYLEELCRSSTSGME
SIO_010081: TIRAP
subclass of: SO_0000673
so part of: TIRAP
location: join(466456..466462,466666..467277,467450..467493)
location: region:466456-467493:1
so has part: feature:466456-466462:1:exon
so has part: feature:466666-467277:1:exon
so has part: feature:467450-467493:1:exon

XP_010721871.1
type: Protein
SIO_000068: ncbiprotein

position:466456:1
position: 466456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466456-466462:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466666-467277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467450-467493:1:exon

DCPS
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 475296..485933
location: region:475296-485933:1
so has part: feature:475296-485933:1:exon
subclass of: SO_0000010

100544934
type: Gene
SIO_000068: ncbigene

position:475296:1
position: 475296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485933:1
position: 485933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475296-485933:1:exon

DCPS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DCPS
product: decapping enzyme, scavenger
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019622909.1
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(475296..475308,475568..475782,479803..479916,483565..483675,485592..485933)
location: region:475296-485933:1
so has part: feature:475296-475308:1:exon
so has part: feature:475568-475782:1:exon
so has part: feature:479803-479916:1:exon
so has part: feature:483565-483675:1:exon
so has part: feature:485592-485933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:475296-475308:1:exon

position:475308:1
position: 475308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475568-475782:1:exon

position:475568:1
position: 475568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475782:1
position: 475782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:479803-479916:1:exon

position:479803:1
position: 479803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479916:1
position: 479916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:483565-483675:1:exon

position:483565:1
position: 483565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483675:1
position: 483675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:485592-485933:1:exon

position:485592:1
position: 485592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCPS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DCPS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: m7GpppX diphosphatase
translation: MYLRRSNLGFICDYNSVNVVFCVFFFLEIKATVVYPATEKHLQKYLRQEVHLVRETWEDYKNITLPFIQSQSFSIQWVYNILEKKAEADRIIHENPDPCNGFVLVPDFKWNQNQLEDLYLIALIQRRDVKSLRDLRAEHLPLLRNVLQEGKEAIAKRFGVPGSQLRIYLHYQPSYYHLHVHFTALGYDAPGSSAERAHLLEDVIDNLLLDAEYYQKRALTFALRADEPLLKKFQEAGRV
SIO_010081: DCPS
subclass of: SO_0000673
so part of: DCPS
location: join(475296..475308,475568..475782,479803..479916,483565..483675,485592..485858)
location: region:475296-485858:1
so has part: feature:475296-475308:1:exon
so has part: feature:475568-475782:1:exon
so has part: feature:479803-479916:1:exon
so has part: feature:483565-483675:1:exon
so has part: feature:485592-485858:1:exon

XP_019478454.1
type: Protein
SIO_000068: ncbiprotein

position:485858:1
position: 485858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475296-475308:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475568-475782:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479803-479916:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:483565-483675:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485592-485858:1:exon

ST3GAL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 490986..500437
location: region:490986-500437:1
so has part: feature:490986-500437:1:exon
subclass of: SO_0000010

100542452
type: Gene
SIO_000068: ncbigene

position:490986:1
position: 490986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500437:1
position: 500437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:490986-500437:1:exon

ST3GAL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ST3GAL4
product: ST3 beta-galactoside alpha-2,3-sialyltransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 176 samples with support for all annotated introns
transcript id: XM_003212645.4
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(490986..491151,492854..492929,496599..496677,497423..497492,497690..497770,497847..497944,498150..498210,498425..498520,498628..498817,498933..499076,499244..499387,499456..500437)
location: region:490986-500437:1
so has part: feature:490986-491151:1:exon
so has part: feature:492854-492929:1:exon
so has part: feature:496599-496677:1:exon
so has part: feature:497423-497492:1:exon
so has part: feature:497690-497770:1:exon
so has part: feature:497847-497944:1:exon
so has part: feature:498150-498210:1:exon
so has part: feature:498425-498520:1:exon
so has part: feature:498628-498817:1:exon
so has part: feature:498933-499076:1:exon
so has part: feature:499244-499387:1:exon
so has part: feature:499456-500437:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:490986-491151:1:exon

position:491151:1
position: 491151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492854-492929:1:exon

position:492854:1
position: 492854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492929:1
position: 492929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:496599-496677:1:exon

position:496599:1
position: 496599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496677:1
position: 496677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:497423-497492:1:exon

position:497423:1
position: 497423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497492:1
position: 497492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:497690-497770:1:exon

position:497690:1
position: 497690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497770:1
position: 497770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:497847-497944:1:exon

position:497847:1
position: 497847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497944:1
position: 497944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:498150-498210:1:exon

position:498150:1
position: 498150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498210:1
position: 498210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:498425-498520:1:exon

position:498425:1
position: 498425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498520:1
position: 498520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498628-498817:1:exon

position:498628:1
position: 498628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498817:1
position: 498817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:498933-499076:1:exon

position:498933:1
position: 498933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499076:1
position: 499076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:499244-499387:1:exon

position:499244:1
position: 499244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499387:1
position: 499387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:499456-500437:1:exon

position:499456:1
position: 499456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST3GAL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ST3GAL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 4
translation: MSKGKRSHQRDGGREDGPIAQQPPELLPPLLAPRGRTVSGSGCDESSGPRLMPALLIKMINKSRGKILGVLALFLVMVWYSIYREDSFYFPVQENKTVCPSGEVERKAAQLIGNYTRDRPLFLQLKDYFWVRTPSLYELPYGTKGSEDVLLRLLSVTSYSLPESIQSLKCRRCVVVGNGHRLRNSSMGDTINTYDVVIRLNNAPVHGYEQDVGSKTTMRLFYPESAHFDPQAENNPNTLLVLVPFKPMDFQWMEAILNDKKRVRKGFWKQPPLIWDANPEQVRILNPYYMEVTAAKLLSLPMKQPRKVKQKPTTGLLAITLALHFCDLVHIAGFGYPDSANKKQTIHYYEQITLKSMAASEHNISHEAVAIKRMLELGLVKNLTYF
SIO_010081: ST3GAL4
subclass of: SO_0000673
so part of: ST3GAL4
location: join(491117..491151,492854..492929,496599..496677,497423..497492,497690..497770,497847..497944,498150..498210,498425..498520,498628..498817,498933..499076,499244..499387,499456..499542)
location: region:491117-499542:1
so has part: feature:491117-491151:1:exon
so has part: feature:492854-492929:1:exon
so has part: feature:496599-496677:1:exon
so has part: feature:497423-497492:1:exon
so has part: feature:497690-497770:1:exon
so has part: feature:497847-497944:1:exon
so has part: feature:498150-498210:1:exon
so has part: feature:498425-498520:1:exon
so has part: feature:498628-498817:1:exon
so has part: feature:498933-499076:1:exon
so has part: feature:499244-499387:1:exon
so has part: feature:499456-499542:1:exon

XP_003212693.2
type: Protein
SIO_000068: ncbiprotein

position:491117:1
position: 491117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499542:1
position: 499542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491117-491151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492854-492929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:496599-496677:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:497423-497492:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497690-497770:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497847-497944:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:498150-498210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498425-498520:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498628-498817:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498933-499076:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:499244-499387:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:499456-499542:1:exon

KIRREL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(500834..579906)
location: region:500834-579906:-1
so has part: feature:500834-579906:-1:exon
subclass of: SO_0000010

100545085
type: Gene
SIO_000068: ncbigene

position:500834:-1
position: 500834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579906:-1
position: 579906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500834-579906:-1:exon

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019622949.2
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(500834..501695,501933..502019,504010..504119,505136..505243,507399..507597,507704..507804,511760..511886,512853..512980,513269..513417,526657..526762,529848..529998,531112..531269,547140..547289,549226..549375,567742..567819,579807..579906))
location: region:500834-579906:-1
so has part: feature:579807-579906:-1:exon
so has part: feature:567742-567819:-1:exon
so has part: feature:549226-549375:-1:exon
so has part: feature:547140-547289:-1:exon
so has part: feature:531112-531269:-1:exon
so has part: feature:529848-529998:-1:exon
so has part: feature:526657-526762:-1:exon
so has part: feature:513269-513417:-1:exon
so has part: feature:512853-512980:-1:exon
so has part: feature:511760-511886:-1:exon
so has part: feature:507704-507804:-1:exon
so has part: feature:507399-507597:-1:exon
so has part: feature:505136-505243:-1:exon
so has part: feature:504010-504119:-1:exon
so has part: feature:501933-502019:-1:exon
so has part: feature:500834-501695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:579807-579906:-1:exon

position:579807:-1
position: 579807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:567742-567819:-1:exon

position:567742:-1
position: 567742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:567819:-1
position: 567819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:549226-549375:-1:exon

position:549226:-1
position: 549226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549375:-1
position: 549375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:547140-547289:-1:exon

position:547140:-1
position: 547140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547289:-1
position: 547289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:531112-531269:-1:exon

position:531112:-1
position: 531112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531269:-1
position: 531269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:529848-529998:-1:exon

position:529848:-1
position: 529848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529998:-1
position: 529998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:526657-526762:-1:exon

position:526657:-1
position: 526657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526762:-1
position: 526762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:513269-513417:-1:exon

position:513269:-1
position: 513269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513417:-1
position: 513417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:512853-512980:-1:exon

position:512853:-1
position: 512853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512980:-1
position: 512980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:511760-511886:-1:exon

position:511760:-1
position: 511760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511886:-1
position: 511886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:507704-507804:-1:exon

position:507704:-1
position: 507704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507804:-1
position: 507804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:507399-507597:-1:exon

position:507399:-1
position: 507399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:507597:-1
position: 507597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:505136-505243:-1:exon

position:505136:-1
position: 505136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505243:-1
position: 505243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:504010-504119:-1:exon

position:504010:-1
position: 504010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504119:-1
position: 504119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:501933-502019:-1:exon

position:501933:-1
position: 501933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502019:-1
position: 502019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:500834-501695:-1:exon

position:501695:-1
position: 501695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIRREL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KIRREL3
product: kirre like nephrin family adhesion molecule 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010723575.3
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(500834..501695,501933..502019,504010..504119,505136..505243,506634..506669,507399..507597,507704..507804,511760..511886,512853..512980,513269..513417,526657..526762,529848..529998,531112..531269,547140..547289,549226..549375,567742..567819,579807..579906))
location: region:500834-579906:-1
so has part: feature:579807-579906:-1:exon
so has part: feature:567742-567819:-1:exon
so has part: feature:549226-549375:-1:exon
so has part: feature:547140-547289:-1:exon
so has part: feature:531112-531269:-1:exon
so has part: feature:529848-529998:-1:exon
so has part: feature:526657-526762:-1:exon
so has part: feature:513269-513417:-1:exon
so has part: feature:512853-512980:-1:exon
so has part: feature:511760-511886:-1:exon
so has part: feature:507704-507804:-1:exon
so has part: feature:507399-507597:-1:exon
so has part: feature:506634-506669:-1:exon
so has part: feature:505136-505243:-1:exon
so has part: feature:504010-504119:-1:exon
so has part: feature:501933-502019:-1:exon
so has part: feature:500834-501695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:579807-579906:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567742-567819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549226-549375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547140-547289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531112-531269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529848-529998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526657-526762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513269-513417:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512853-512980:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:511760-511886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:507704-507804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:507399-507597:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:506634-506669:-1:exon

position:506634:-1
position: 506634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506669:-1
position: 506669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:505136-505243:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:504010-504119:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501933-502019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:500834-501695:-1:exon

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X2
translation: MRLELKICVREAQWRAELGLPGRGCCLVLGFMYKEKYRRMTEGQASSFTQQPQDQVVIAGQPVTLLCAIPEYNGIVLWIKDGLALGVGRDLSSYPRYLVVGDHLSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPIIMGGPIISLRAGDPLNLTCHADNAKPAASIIWMRKGEVVNGATYSKTLLRDGKRESIMSTLFIAPSDIENGESIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAVTQYRWAKKGQVIKEASGDFYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFNCAWTGNPSLTIVWMKRGSGVVLSNENKLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGQKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTDEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSAKNDIRVEIVHKEPSSGRETEEHPTIKQLMMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSGCPADLRPAGKQRVPTGMSFTNIYSTLSGQSRLYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSISSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(501252..501695,501933..502019,504010..504119,505136..505243,507399..507597,507704..507804,511760..511886,512853..512980,513269..513417,526657..526762,529848..529998,531112..531269,547140..547289,549226..549375,567742..567819,579807..579855))
location: region:501252-579855:-1
so has part: feature:579807-579855:-1:exon
so has part: feature:567742-567819:-1:exon
so has part: feature:549226-549375:-1:exon
so has part: feature:547140-547289:-1:exon
so has part: feature:531112-531269:-1:exon
so has part: feature:529848-529998:-1:exon
so has part: feature:526657-526762:-1:exon
so has part: feature:513269-513417:-1:exon
so has part: feature:512853-512980:-1:exon
so has part: feature:511760-511886:-1:exon
so has part: feature:507704-507804:-1:exon
so has part: feature:507399-507597:-1:exon
so has part: feature:505136-505243:-1:exon
so has part: feature:504010-504119:-1:exon
so has part: feature:501933-502019:-1:exon
so has part: feature:501252-501695:-1:exon

XP_019478494.1
type: Protein
SIO_000068: ncbiprotein

position:501252:-1
position: 501252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579855:-1
position: 579855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579807-579855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567742-567819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549226-549375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547140-547289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531112-531269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529848-529998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526657-526762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513269-513417:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512853-512980:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:511760-511886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:507704-507804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:507399-507597:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505136-505243:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:504010-504119:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:501933-502019:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501252-501695:-1:exon

KIRREL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KIRREL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kin of IRRE-like protein 3 isoform X1
translation: MRLELKICVREAQWRAELGLPGRGCCLVLGFMYKEKYRRMTEGQASSFTQQPQDQVVIAGQPVTLLCAIPEYNGIVLWIKDGLALGVGRDLSSYPRYLVVGDHLSGEHHLKILRADLQDDAVYECQAIQAAIRSRPARLTVLVPPDDPIIMGGPIISLRAGDPLNLTCHADNAKPAASIIWMRKGEVVNGATYSKTLLRDGKRESIMSTLFIAPSDIENGESIVCRATNKAIPSGKETSVTIDIQHPPLVNLSVEPQPVLEDNTVKFHCSAKANPAVTQYRWAKKGQVIKEASGDFYETIVDHTFFFEPVSCEVTNALGSTNISRTVDVYFGPRMATEPQSLLVDLGSDAVFNCAWTGNPSLTIVWMKRGSGVVLSNENKLTLKSVRQEDAGKYVCRAVVPRVGAGEREVTLTVNGPPIISSTQTQHALHGQKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETVSTDEGVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGTEMKSGAGMQAESVPMAVIIGVAVGAGVAFLVLMATIVAFCCARSQRNLKGVVSAKNDIRVEIVHKEPSSGRETEEHPTIKQLMMDRGEFQQDSVLKQLEVLKEEEKEFQNLKDPTNGYYSVNTFKEHHSTPTISLSGCPADLRPAGKQRVPTGMSFTNIYSTLSGQSRLYDYSQRFVLGMGSSSIELCEREFQRGSMSDSSSFLDTQCDSSISSSGKQDGYVQFDKASKASASSSHHSQSSSQNSDPSRPLQRRMQTHV
SIO_010081: KIRREL3
subclass of: SO_0000673
so part of: KIRREL3
location: complement(join(501252..501695,501933..502019,504010..504119,505136..505243,506634..506669,507399..507597,507704..507804,511760..511886,512853..512980,513269..513417,526657..526762,529848..529998,531112..531269,547140..547289,549226..549375,567742..567819,579807..579855))
location: region:501252-579855:-1
so has part: feature:579807-579855:-1:exon
so has part: feature:567742-567819:-1:exon
so has part: feature:549226-549375:-1:exon
so has part: feature:547140-547289:-1:exon
so has part: feature:531112-531269:-1:exon
so has part: feature:529848-529998:-1:exon
so has part: feature:526657-526762:-1:exon
so has part: feature:513269-513417:-1:exon
so has part: feature:512853-512980:-1:exon
so has part: feature:511760-511886:-1:exon
so has part: feature:507704-507804:-1:exon
so has part: feature:507399-507597:-1:exon
so has part: feature:506634-506669:-1:exon
so has part: feature:505136-505243:-1:exon
so has part: feature:504010-504119:-1:exon
so has part: feature:501933-502019:-1:exon
so has part: feature:501252-501695:-1:exon

XP_010721877.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:579807-579855:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:567742-567819:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549226-549375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:547140-547289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:531112-531269:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:529848-529998:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:526657-526762:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:513269-513417:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512853-512980:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:511760-511886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:507704-507804:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:507399-507597:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:506634-506669:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505136-505243:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:504010-504119:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501933-502019:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:501252-501695:-1:exon

LOC109370989
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370989
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(516120..522772)
location: region:516120-522772:-1
so has part: feature:516120-522772:-1:exon
subclass of: SO_0000011

109370989
type: Gene
SIO_000068: ncbigene

position:516120:-1
position: 516120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522772:-1
position: 522772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516120-522772:-1:exon

LOC109370989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370989
product: uncharacterized LOC109370989
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002121593.1
SIO_010081: LOC109370989
subclass of: SO_0000673
so part of: LOC109370989
location: complement(join(516120..517906,522733..522772))
location: region:516120-522772:-1
so has part: feature:522733-522772:-1:exon
so has part: feature:516120-517906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:522733-522772:-1:exon

position:522733:-1
position: 522733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516120-517906:-1:exon

position:517906:-1
position: 517906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104914340
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104914340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(791179..798083)
location: region:791179-798083:-1
so has part: feature:791179-798083:-1:exon
subclass of: SO_0000011

104914340
type: Gene
SIO_000068: ncbigene

position:791179:-1
position: 791179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798083:-1
position: 798083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791179-798083:-1:exon

LOC104914340
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104914340
product: uncharacterized LOC104914340
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_795960.2
SIO_010081: LOC104914340
subclass of: SO_0000673
so part of: LOC104914340
location: complement(join(791179..791571,792738..792911,793276..793397,798040..798083))
location: region:791179-798083:-1
so has part: feature:798040-798083:-1:exon
so has part: feature:793276-793397:-1:exon
so has part: feature:792738-792911:-1:exon
so has part: feature:791179-791571:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798040-798083:-1:exon

position:798040:-1
position: 798040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:793276-793397:-1:exon

position:793276:-1
position: 793276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793397:-1
position: 793397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792738-792911:-1:exon

position:792738:-1
position: 792738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792911:-1
position: 792911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:791179-791571:-1:exon

position:791571:-1
position: 791571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109370991
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370991
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(813296..818276)
location: region:813296-818276:-1
so has part: feature:813296-818276:-1:exon
subclass of: SO_0000011

109370991
type: Gene
SIO_000068: ncbigene

position:813296:-1
position: 813296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818276:-1
position: 818276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813296-818276:-1:exon

LOC109370991
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370991
product: uncharacterized LOC109370991
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002121596.1
SIO_010081: LOC109370991
subclass of: SO_0000673
so part of: LOC109370991
location: complement(join(813296..813739,818241..818276))
location: region:813296-818276:-1
so has part: feature:818241-818276:-1:exon
so has part: feature:813296-813739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:818241-818276:-1:exon

position:818241:-1
position: 818241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:813296-813739:-1:exon

position:813739:-1
position: 813739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(926513..992941)
location: region:926513-992941:-1
so has part: feature:926513-992941:-1:exon
subclass of: SO_0000010

100545813
type: Gene
SIO_000068: ncbigene

position:926513:-1
position: 926513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992941:-1
position: 992941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926513-992941:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010723578.3
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(926513..927036,927850..927968,936606..936866,940427..940675,940800..940877,944121..944321,944992..945111,985235..985379,986813..986895,992892..992941))
location: region:926513-992941:-1
so has part: feature:992892-992941:-1:exon
so has part: feature:986813-986895:-1:exon
so has part: feature:985235-985379:-1:exon
so has part: feature:944992-945111:-1:exon
so has part: feature:944121-944321:-1:exon
so has part: feature:940800-940877:-1:exon
so has part: feature:940427-940675:-1:exon
so has part: feature:936606-936866:-1:exon
so has part: feature:927850-927968:-1:exon
so has part: feature:926513-927036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:992892-992941:-1:exon

position:992892:-1
position: 992892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:986813-986895:-1:exon

position:986813:-1
position: 986813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986895:-1
position: 986895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:985235-985379:-1:exon

position:985235:-1
position: 985235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985379:-1
position: 985379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:944992-945111:-1:exon

position:944992:-1
position: 944992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945111:-1
position: 945111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:944121-944321:-1:exon

position:944121:-1
position: 944121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944321:-1
position: 944321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:940800-940877:-1:exon

position:940800:-1
position: 940800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940877:-1
position: 940877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:940427-940675:-1:exon

position:940427:-1
position: 940427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940675:-1
position: 940675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:936606-936866:-1:exon

position:936606:-1
position: 936606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936866:-1
position: 936866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:927850-927968:-1:exon

position:927850:-1
position: 927850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927968:-1
position: 927968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:926513-927036:-1:exon

position:927036:-1
position: 927036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_010723581.3
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(926513..927036,927850..927968,936606..936866,940427..940675,940800..940877,944121..944321,944992..945111,983321..983423))
location: region:926513-983423:-1
so has part: feature:983321-983423:-1:exon
so has part: feature:944992-945111:-1:exon
so has part: feature:944121-944321:-1:exon
so has part: feature:940800-940877:-1:exon
so has part: feature:940427-940675:-1:exon
so has part: feature:936606-936866:-1:exon
so has part: feature:927850-927968:-1:exon
so has part: feature:926513-927036:-1:exon

position:983423:-1
position: 983423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983321-983423:-1:exon

position:983321:-1
position: 983321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:944992-945111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:944121-944321:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940800-940877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940427-940675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:936606-936866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:927850-927968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:926513-927036:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010723582.3
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(926821..927036,927850..927968,936606..936866,940427..940675,940800..940877,944121..944321,944992..945111,985235..985376,986813..986895,992892..992941))
location: region:926821-992941:-1
so has part: feature:992892-992941:-1:exon
so has part: feature:986813-986895:-1:exon
so has part: feature:985235-985376:-1:exon
so has part: feature:944992-945111:-1:exon
so has part: feature:944121-944321:-1:exon
so has part: feature:940800-940877:-1:exon
so has part: feature:940427-940675:-1:exon
so has part: feature:936606-936866:-1:exon
so has part: feature:927850-927968:-1:exon
so has part: feature:926821-927036:-1:exon

position:926821:-1
position: 926821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992892-992941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986813-986895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985235-985376:-1:exon

position:985376:-1
position: 985376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:944992-945111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:944121-944321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940800-940877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940427-940675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:936606-936866:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:927850-927968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:926821-927036:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X2
translation: MVFPSSPAPAQRIAPGTSEMMSYYMDTTIGNTGPYPLARPGVMQGAGSCYEDPWMPCRLQSVCCPPRACCPPWDEAAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEAKPYPANGVNATYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPTALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(926821..927036,927850..927968,936606..936866,940427..940675,940800..940877,944121..944321,944992..945111,985235..985376,986813..986895,992892..992937))
location: region:926821-992937:-1
so has part: feature:992892-992937:-1:exon
so has part: feature:986813-986895:-1:exon
so has part: feature:985235-985376:-1:exon
so has part: feature:944992-945111:-1:exon
so has part: feature:944121-944321:-1:exon
so has part: feature:940800-940877:-1:exon
so has part: feature:940427-940675:-1:exon
so has part: feature:936606-936866:-1:exon
so has part: feature:927850-927968:-1:exon
so has part: feature:926821-927036:-1:exon

XP_010721884.2
type: Protein
SIO_000068: ncbiprotein

position:992937:-1
position: 992937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992892-992937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986813-986895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985235-985376:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:944992-945111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:944121-944321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940800-940877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940427-940675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:936606-936866:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:927850-927968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:926821-927036:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X1
translation: MVFPSSPAPAQRIAPGTSEMMSYYMDTTIGNTGPYPLARPGVMKQGAGSCYEDPWMPCRLQSVCCPPRACCPPWDEAAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEAKPYPANGVNATYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPTALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(926821..927036,927850..927968,936606..936866,940427..940675,940800..940877,944121..944321,944992..945111,985235..985379,986813..986895,992892..992937))
location: region:926821-992937:-1
so has part: feature:992892-992937:-1:exon
so has part: feature:986813-986895:-1:exon
so has part: feature:985235-985379:-1:exon
so has part: feature:944992-945111:-1:exon
so has part: feature:944121-944321:-1:exon
so has part: feature:940800-940877:-1:exon
so has part: feature:940427-940675:-1:exon
so has part: feature:936606-936866:-1:exon
so has part: feature:927850-927968:-1:exon
so has part: feature:926821-927036:-1:exon

XP_010721880.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:992892-992937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986813-986895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985235-985379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:944992-945111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:944121-944321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940800-940877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940427-940675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:936606-936866:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:927850-927968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:926821-927036:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_010723577.3
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(926821..927036,927850..927968,936606..936866,940427..940675,940800..940877,944121..944321,944992..945111,985235..985379,986813..986895,992814..992916))
location: region:926821-992916:-1
so has part: feature:992814-992916:-1:exon
so has part: feature:986813-986895:-1:exon
so has part: feature:985235-985379:-1:exon
so has part: feature:944992-945111:-1:exon
so has part: feature:944121-944321:-1:exon
so has part: feature:940800-940877:-1:exon
so has part: feature:940427-940675:-1:exon
so has part: feature:936606-936866:-1:exon
so has part: feature:927850-927968:-1:exon
so has part: feature:926821-927036:-1:exon

position:992916:-1
position: 992916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992814-992916:-1:exon

position:992814:-1
position: 992814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:986813-986895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:985235-985379:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:944992-945111:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:944121-944321:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940800-940877:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:940427-940675:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:936606-936866:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:927850-927968:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:926821-927036:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X3
translation: MMSYYMDTTIGNTGPYPLARPGVMKQGAGSCYEDPWMPCRLQSVCCPPRACCPPWDEAAIQEVPTGLEHYSTDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEAKPYPANGVNATYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPTALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(926821..927036,927850..927968,936606..936866,940427..940675,940800..940877,944121..944321,944992..945111,985235..985379,986813..986884))
location: region:926821-986884:-1
so has part: feature:986813-986884:-1:exon
so has part: feature:985235-985379:-1:exon
so has part: feature:944992-945111:-1:exon
so has part: feature:944121-944321:-1:exon
so has part: feature:940800-940877:-1:exon
so has part: feature:940427-940675:-1:exon
so has part: feature:936606-936866:-1:exon
so has part: feature:927850-927968:-1:exon
so has part: feature:926821-927036:-1:exon

XP_010721879.1
type: Protein
SIO_000068: ncbiprotein

position:986884:-1
position: 986884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986813-986884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985235-985379:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:944992-945111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:944121-944321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940800-940877:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940427-940675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:936606-936866:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:927850-927968:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:926821-927036:-1:exon

ETS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ETS1
product: ETS proto-oncogene 1, transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 210 samples with support for all annotated introns
transcript id: XM_010723580.3
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(926821..927036,927850..927968,936606..936866,940427..940675,940800..940877,944121..944321,944992..945111,966148..966359))
location: region:926821-966359:-1
so has part: feature:966148-966359:-1:exon
so has part: feature:944992-945111:-1:exon
so has part: feature:944121-944321:-1:exon
so has part: feature:940800-940877:-1:exon
so has part: feature:940427-940675:-1:exon
so has part: feature:936606-936866:-1:exon
so has part: feature:927850-927968:-1:exon
so has part: feature:926821-927036:-1:exon

position:966359:-1
position: 966359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966148-966359:-1:exon

position:966148:-1
position: 966148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:944992-945111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:944121-944321:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940800-940877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940427-940675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:936606-936866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:927850-927968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:926821-927036:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X4
translation: MKAAVDLKPTLTIIKTEKVDIDLFPSPDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEAKPYPANGVNATYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPTALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(926821..927036,927850..927968,936606..936866,940427..940675,940800..940877,944121..944321,944992..945111,966148..966229))
location: region:926821-966229:-1
so has part: feature:966148-966229:-1:exon
so has part: feature:944992-945111:-1:exon
so has part: feature:944121-944321:-1:exon
so has part: feature:940800-940877:-1:exon
so has part: feature:940427-940675:-1:exon
so has part: feature:936606-936866:-1:exon
so has part: feature:927850-927968:-1:exon
so has part: feature:926821-927036:-1:exon

XP_010721882.1
type: Protein
SIO_000068: ncbiprotein

position:966229:-1
position: 966229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966148-966229:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:944992-945111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:944121-944321:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940800-940877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940427-940675:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:936606-936866:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:927850-927968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:926821-927036:-1:exon

ETS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ETS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C-ets-1 isoform X5
translation: MECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELAPDFVGDILWEHLEILQKEEAKPYPANGVNATYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPTALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE
SIO_010081: ETS1
subclass of: SO_0000673
so part of: ETS1
location: complement(join(926821..927036,927850..927968,936606..936866,940427..940675,940800..940877,944121..944321,944992..945109))
location: region:926821-945109:-1
so has part: feature:944992-945109:-1:exon
so has part: feature:944121-944321:-1:exon
so has part: feature:940800-940877:-1:exon
so has part: feature:940427-940675:-1:exon
so has part: feature:936606-936866:-1:exon
so has part: feature:927850-927968:-1:exon
so has part: feature:926821-927036:-1:exon

XP_010721883.1
type: Protein
SIO_000068: ncbiprotein

position:945109:-1
position: 945109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944992-945109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:944121-944321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:940800-940877:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:940427-940675:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:936606-936866:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:927850-927968:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:926821-927036:-1:exon

FLI1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1023997..1103241
location: region:1023997-1103241:1
so has part: feature:1023997-1103241:1:exon
subclass of: SO_0000010

100545965
type: Gene
SIO_000068: ncbigene

position:1023997:1
position: 1023997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103241:1
position: 1103241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023997-1103241:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019622955.2
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1023997..1024359,1026071..1026179,1070410..1070621,1078536..1078690,1081386..1081589,1087375..1087443,1099303..1099371,1100469..1100531,1101796..1101843,1102609..1103241)
location: region:1023997-1103241:1
so has part: feature:1023997-1024359:1:exon
so has part: feature:1026071-1026179:1:exon
so has part: feature:1070410-1070621:1:exon
so has part: feature:1078536-1078690:1:exon
so has part: feature:1081386-1081589:1:exon
so has part: feature:1087375-1087443:1:exon
so has part: feature:1099303-1099371:1:exon
so has part: feature:1100469-1100531:1:exon
so has part: feature:1101796-1101843:1:exon
so has part: feature:1102609-1103241:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1023997-1024359:1:exon

position:1024359:1
position: 1024359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1026071-1026179:1:exon

position:1026071:1
position: 1026071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026179:1
position: 1026179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070410-1070621:1:exon

position:1070410:1
position: 1070410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1070621:1
position: 1070621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1078536-1078690:1:exon

position:1078536:1
position: 1078536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1078690:1
position: 1078690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1081386-1081589:1:exon

position:1081386:1
position: 1081386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081589:1
position: 1081589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1087375-1087443:1:exon

position:1087375:1
position: 1087375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087443:1
position: 1087443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1099303-1099371:1:exon

position:1099303:1
position: 1099303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099371:1
position: 1099371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1100469-1100531:1:exon

position:1100469:1
position: 1100469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100531:1
position: 1100531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1101796-1101843:1:exon

position:1101796:1
position: 1101796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101843:1
position: 1101843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1102609-1103241:1:exon

position:1102609:1
position: 1102609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_019622954.2
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1023997..1024359,1026071..1026152,1070410..1070621,1078536..1078690,1081386..1081589,1087375..1087443,1099303..1099371,1100469..1100531,1101796..1101843,1102609..1103138)
location: region:1023997-1103138:1
so has part: feature:1023997-1024359:1:exon
so has part: feature:1026071-1026152:1:exon
so has part: feature:1070410-1070621:1:exon
so has part: feature:1078536-1078690:1:exon
so has part: feature:1081386-1081589:1:exon
so has part: feature:1087375-1087443:1:exon
so has part: feature:1099303-1099371:1:exon
so has part: feature:1100469-1100531:1:exon
so has part: feature:1101796-1101843:1:exon
so has part: feature:1102609-1103138:1:exon

position:1103138:1
position: 1103138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023997-1024359:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1026071-1026152:1:exon

position:1026152:1
position: 1026152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1070410-1070621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1078536-1078690:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1081386-1081589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1087375-1087443:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1099303-1099371:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1100469-1100531:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1101796-1101843:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1102609-1103138:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X1
translation: MFQTVPDTSSYVKVRHDSIFKQEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTFFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHAEASSRLATKEDPSSYDAVRRTGWGSNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPSESSMYKYPSDLSYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1026114..1026179,1070410..1070621,1078536..1078690,1081386..1081589,1087375..1087443,1099303..1099371,1100469..1100531,1101796..1101843,1102609..1103138)
location: region:1026114-1103138:1
so has part: feature:1026114-1026179:1:exon
so has part: feature:1070410-1070621:1:exon
so has part: feature:1078536-1078690:1:exon
so has part: feature:1081386-1081589:1:exon
so has part: feature:1087375-1087443:1:exon
so has part: feature:1099303-1099371:1:exon
so has part: feature:1100469-1100531:1:exon
so has part: feature:1101796-1101843:1:exon
so has part: feature:1102609-1103138:1:exon

XP_019478500.1
type: Protein
SIO_000068: ncbiprotein

position:1026114:1
position: 1026114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026114-1026179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070410-1070621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078536-1078690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1081386-1081589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1087375-1087443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099303-1099371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100469-1100531:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101796-1101843:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1102609-1103138:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X2
translation: MFQTVPDTSSYVKEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTFFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHAEASSRLATKEDPSSYDAVRRTGWGSNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPSESSMYKYPSDLSYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1026114..1026152,1070410..1070621,1078536..1078690,1081386..1081589,1087375..1087443,1099303..1099371,1100469..1100531,1101796..1101843,1102609..1103138)
location: region:1026114-1103138:1
so has part: feature:1026114-1026152:1:exon
so has part: feature:1070410-1070621:1:exon
so has part: feature:1078536-1078690:1:exon
so has part: feature:1081386-1081589:1:exon
so has part: feature:1087375-1087443:1:exon
so has part: feature:1099303-1099371:1:exon
so has part: feature:1100469-1100531:1:exon
so has part: feature:1101796-1101843:1:exon
so has part: feature:1102609-1103138:1:exon

XP_019478499.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1026114-1026152:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070410-1070621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078536-1078690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1081386-1081589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1087375-1087443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099303-1099371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100469-1100531:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101796-1101843:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1102609-1103138:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_010723584.3
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1036348..1036785,1070410..1070621,1078536..1078690,1081386..1081589,1087375..1087443,1099303..1099371,1100469..1100531,1101796..1101843,1102609..1103138)
location: region:1036348-1103138:1
so has part: feature:1036348-1036785:1:exon
so has part: feature:1070410-1070621:1:exon
so has part: feature:1078536-1078690:1:exon
so has part: feature:1081386-1081589:1:exon
so has part: feature:1087375-1087443:1:exon
so has part: feature:1099303-1099371:1:exon
so has part: feature:1100469-1100531:1:exon
so has part: feature:1101796-1101843:1:exon
so has part: feature:1102609-1103138:1:exon

position:1036348:1
position: 1036348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036348-1036785:1:exon

position:1036785:1
position: 1036785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1070410-1070621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078536-1078690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1081386-1081589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1087375-1087443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099303-1099371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100469-1100531:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101796-1101843:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1102609-1103138:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X3
translation: MDGTIKEALSVVSDDQSLFDSTYGAATHLPKADMTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTFFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHAEASSRLATKEDPSSYDAVRRTGWGSNMNSGLTKSPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPSESSMYKYPSDLSYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1036768..1036785,1070410..1070621,1078536..1078690,1081386..1081589,1087375..1087443,1099303..1099371,1100469..1100531,1101796..1101843,1102609..1103138)
location: region:1036768-1103138:1
so has part: feature:1036768-1036785:1:exon
so has part: feature:1070410-1070621:1:exon
so has part: feature:1078536-1078690:1:exon
so has part: feature:1081386-1081589:1:exon
so has part: feature:1087375-1087443:1:exon
so has part: feature:1099303-1099371:1:exon
so has part: feature:1100469-1100531:1:exon
so has part: feature:1101796-1101843:1:exon
so has part: feature:1102609-1103138:1:exon

XP_010721886.1
type: Protein
SIO_000068: ncbiprotein

position:1036768:1
position: 1036768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036768-1036785:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070410-1070621:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078536-1078690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1081386-1081589:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1087375-1087443:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1099303-1099371:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1100469-1100531:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1101796-1101843:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1102609-1103138:1:exon

FLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FLI1
product: Fli-1 proto-oncogene, ETS transcription factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 178 samples with support for all annotated introns
transcript id: XM_031556857.1
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1070410..1070621,1078536..1078690,1081386..1081589,1087375..1087443,1100469..1100531,1101796..1101843,1102609..1103138)
location: region:1070410-1103138:1
so has part: feature:1070410-1070621:1:exon
so has part: feature:1078536-1078690:1:exon
so has part: feature:1081386-1081589:1:exon
so has part: feature:1087375-1087443:1:exon
so has part: feature:1100469-1100531:1:exon
so has part: feature:1101796-1101843:1:exon
so has part: feature:1102609-1103138:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1070410-1070621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078536-1078690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1081386-1081589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087375-1087443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100469-1100531:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101796-1101843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1102609-1103138:1:exon

FLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Friend leukemia integration 1 transcription factor isoform X4
translation: MTASGNPDYGQPHKINPLPPQQEWINQPVRVNVKREYDHMNGSRESPVDCSVNKCSKLVGAGTESNPMSYSTYMDEKNGPPPNMTTNERRVIVPADPTLWTQEHVRQWLEWAIKEYGLMEIDTTFFQNMDGKELCKMNKDDFLRTTSLYNTEVLLSHLSYLRESSSLLVYNTPSHAEASSRLATKEGPPVAGTQNVNKTTEQQRPQPDPYQILGPTSSRLANPGSGQIQLWQFLLELLSDSSNASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPHPSESSMYKYPSDLSYMPSYHAHQQKVNFVPPHPSSMPVTSSSFFGAASPYWTSPAGSIYPNPNVPRHPNAHVSPHLGSYY
SIO_010081: FLI1
subclass of: SO_0000673
so part of: FLI1
location: join(1070491..1070621,1078536..1078690,1081386..1081589,1087375..1087443,1100469..1100531,1101796..1101843,1102609..1103138)
location: region:1070491-1103138:1
so has part: feature:1070491-1070621:1:exon
so has part: feature:1078536-1078690:1:exon
so has part: feature:1081386-1081589:1:exon
so has part: feature:1087375-1087443:1:exon
so has part: feature:1100469-1100531:1:exon
so has part: feature:1101796-1101843:1:exon
so has part: feature:1102609-1103138:1:exon

XP_031412717.1
type: Protein
SIO_000068: ncbiprotein

position:1070491:1
position: 1070491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070491-1070621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1078536-1078690:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1081386-1081589:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087375-1087443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100469-1100531:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101796-1101843:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1102609-1103138:1:exon

KCNJ5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1109264..1173556
location: region:1109264-1173556:1
so has part: feature:1109264-1173556:1:exon
subclass of: SO_0000010

100546277
type: Gene
SIO_000068: ncbigene

position:1109264:1
position: 1109264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173556:1
position: 1173556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109264-1173556:1:exon

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010723586.3
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1109264..1109357,1119021..1119174,1145426..1146372,1155585..1156379)
location: region:1109264-1156379:1
so has part: feature:1109264-1109357:1:exon
so has part: feature:1119021-1119174:1:exon
so has part: feature:1145426-1146372:1:exon
so has part: feature:1155585-1156379:1:exon

position:1156379:1
position: 1156379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109264-1109357:1:exon

position:1109357:1
position: 1109357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1119021-1119174:1:exon

position:1119021:1
position: 1119021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119174:1
position: 1119174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1145426-1146372:1:exon

position:1145426:1
position: 1145426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146372:1
position: 1146372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1155585-1156379:1:exon

position:1155585:1
position: 1155585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1109365..1114619)
location: region:1109365-1114619:-1
so has part: feature:1109365-1114619:-1:exon
subclass of: SO_0000010

100546122
type: Gene
SIO_000068: ncbigene

position:1109365:-1
position: 1109365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114619:-1
position: 1114619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109365-1114619:-1:exon

KCNJ1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCNJ1
product: potassium inwardly rectifying channel subfamily J member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010723588.3
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: complement(1109365..1114619)
location: region:1109365-1114619:-1
so has part: feature:1109365-1114619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109365-1114619:-1:exon

KCNJ1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCNJ1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-sensitive inward rectifier potassium channel 1
translation: MFNYLRKRFASHITERSRRKARLVSKDGRCNIEFGNVEQSRFVFLIDIWTTILDLRWRYKMTIFISAFLGSWFLFGLLWYVVAYIHKDLPEFNPSINHTPCVENINGLTSAFLFSLETQVTIGYGFRCVTEQCVTAIFLLIFQSILGVIINSFMCGAILAKISRSKNRAKTITFSRNAVISKRGGKLCLLIRVANLRKSLLIGSHIYGKLLKTTITPEGETIILDQVNIEFIVDAGNENLFFISPLTIYHIIDKNSPFFHMAAETILQQDFELVVFLDGTVEATSATCQVRTSYIPEEVLWGYRFAPIVSKTKEGKYRVDFQNFSKTVAVEMPHCAFCLYNEKEAKAKEKKGYDNPGFVLAEVSEASDTKM
SIO_010081: KCNJ1
subclass of: SO_0000673
so part of: KCNJ1
location: complement(1112080..1113195)
location: region:1112080-1113195:-1
so has part: feature:1112080-1113195:-1:exon

XP_010721890.1
type: Protein
SIO_000068: ncbiprotein

position:1112080:-1
position: 1112080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1113195:-1
position: 1113195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112080-1113195:-1:exon

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 64 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_003212669.4
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1137911..1138285,1145426..1146372,1155585..1156379)
location: region:1137911-1156379:1
so has part: feature:1137911-1138285:1:exon
so has part: feature:1145426-1146372:1:exon
so has part: feature:1155585-1156379:1:exon

position:1137911:1
position: 1137911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137911-1138285:1:exon

position:1138285:1
position: 1138285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1145426-1146372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1155585-1156379:1:exon

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019622958.2
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1143730..1143920,1145426..1146372,1173427..1173556)
location: region:1143730-1173556:1
so has part: feature:1143730-1143920:1:exon
so has part: feature:1145426-1146372:1:exon
so has part: feature:1173427-1173556:1:exon

position:1143730:1
position: 1143730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143730-1143920:1:exon

position:1143920:1
position: 1143920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1145426-1146372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173427-1173556:1:exon

position:1173427:1
position: 1173427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCNJ5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCNJ5
product: potassium inwardly rectifying channel subfamily J member 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 65 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019622957.2
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1143737..1143920,1145426..1146372,1155585..1156379)
location: region:1143737-1156379:1
so has part: feature:1143737-1143920:1:exon
so has part: feature:1145426-1146372:1:exon
so has part: feature:1155585-1156379:1:exon

position:1143737:1
position: 1143737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143737-1143920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145426-1146372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1155585-1156379:1:exon

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4 isoform X3
translation: MAGLPGGWSQQGWFQQQALAVSVGPAMARDSRIFMNQDMDIGVASREPKKIPKQARDDVPIATDRTRLITAEGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTITWLFFGFIWWLIAYIRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIVLLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRTQLEKEEFEIVVILEGMVEATALLLRSSCNTQRTT
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1143850..1143920,1145426..1146372,1173427..1173470)
location: region:1143850-1173470:1
so has part: feature:1143850-1143920:1:exon
so has part: feature:1145426-1146372:1:exon
so has part: feature:1173427-1173470:1:exon

XP_019478503.1
type: Protein
SIO_000068: ncbiprotein

position:1143850:1
position: 1143850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173470:1
position: 1173470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143850-1143920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145426-1146372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173427-1173470:1:exon

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4 isoform X1
translation: MAGLPGGWSQQGWFQQQALAVSVGPAMARDSRIFMNQDMDIGVASREPKKIPKQARDDVPIATDRTRLITAEGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTITWLFFGFIWWLIAYIRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIVLLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRTQLEKEEFEIVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEKDFYEVDYNSFHSTYETNTPVCCAKELAESRREGQLLSSISSATVLGGGREAETARGEEEEEEEDREPAAFSGANGTAGEVKEDLPV
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1143850..1143920,1145426..1146372,1155585..1155931)
location: region:1143850-1155931:1
so has part: feature:1143850-1143920:1:exon
so has part: feature:1145426-1146372:1:exon
so has part: feature:1155585-1155931:1:exon

XP_019478502.1
type: Protein
SIO_000068: ncbiprotein

position:1155931:1
position: 1155931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143850-1143920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1145426-1146372:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1155585-1155931:1:exon

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4 isoform X2
translation: MARDSRIFMNQDMDIGVASREPKKIPKQARDDVPIATDRTRLITAEGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTITWLFFGFIWWLIAYIRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIVLLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRTQLEKEEFEIVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEKDFYEVDYNSFHSTYETNTPVCCAKELAESRREGQLLSSISSATVLGGGREAETARGEEEEEEEDREPAAFSGANGTAGEVKEDLPV
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1145433..1146372,1155585..1155931)
location: region:1145433-1155931:1
so has part: feature:1145433-1146372:1:exon
so has part: feature:1155585-1155931:1:exon

XP_003212717.1
type: Protein
SIO_000068: ncbiprotein

position:1145433:1
position: 1145433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145433-1146372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155585-1155931:1:exon

KCNJ5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCNJ5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G protein-activated inward rectifier potassium channel 4 isoform X2
translation: MARDSRIFMNQDMDIGVASREPKKIPKQARDDVPIATDRTRLITAEGKKPRQRYMEKSGKCNVHHGNVQETYRYLSDLFTTLVDLKWRFNLLVFTMVYTITWLFFGFIWWLIAYIRGDLDHLEDENWIPCVENLSGFVSAFLFSIETETTIGYGYRVITEKCPEGIVLLLIQAILGSIVNAFMVGCMFVKISQPKKRAETLMFSNNAVISMRDEKLCLMFRVGDLRNSHIVEASIRAKLIKSKQTKEGEFIPLNQTDINVGFDTGDDRLFLVSPLIISHEINEKSPFWEMSRTQLEKEEFEIVVILEGMVEATGMTCQARSSYMDTEVLWGHRFTPVLTLEKDFYEVDYNSFHSTYETNTPVCCAKELAESRREGQLLSSISSATVLGGGREAETARGEEEEEEEDREPAAFSGANGTAGEVKEDLPV
SIO_010081: KCNJ5
subclass of: SO_0000673
so part of: KCNJ5
location: join(1145433..1146372,1155585..1155931)
location: region:1145433-1155931:1
so has part: feature:1145433-1146372:1:exon
so has part: feature:1155585-1155931:1:exon

XP_010721888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1145433-1146372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1155585-1155931:1:exon

ARHGAP32
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1188391..1334686)
location: region:1188391-1334686:-1
so has part: feature:1188391-1334686:-1:exon
subclass of: SO_0000010

100546432
type: Gene
SIO_000068: ncbigene

position:1188391:-1
position: 1188391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334686:-1
position: 1334686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1188391-1334686:-1:exon

ARHGAP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARHGAP32
product: Rho GTPase activating protein 32, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031556858.1
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(1188391..1192674,1193051..1193967,1194622..1195476,1196001..1196075,1197180..1197325,1198102..1198303,1199990..1200135,1201628..1201735,1203618..1203700,1204324..1204468,1207145..1207247,1215520..1215669,1232691..1232772,1238707..1238784,1239990..1240112,1241703..1241795,1243529..1243666,1257261..1257347,1281957..1282041,1283568..1283659,1296806..1296914,1334621..1334686))
location: region:1188391-1334686:-1
so has part: feature:1334621-1334686:-1:exon
so has part: feature:1296806-1296914:-1:exon
so has part: feature:1283568-1283659:-1:exon
so has part: feature:1281957-1282041:-1:exon
so has part: feature:1257261-1257347:-1:exon
so has part: feature:1243529-1243666:-1:exon
so has part: feature:1241703-1241795:-1:exon
so has part: feature:1239990-1240112:-1:exon
so has part: feature:1238707-1238784:-1:exon
so has part: feature:1232691-1232772:-1:exon
so has part: feature:1215520-1215669:-1:exon
so has part: feature:1207145-1207247:-1:exon
so has part: feature:1204324-1204468:-1:exon
so has part: feature:1203618-1203700:-1:exon
so has part: feature:1201628-1201735:-1:exon
so has part: feature:1199990-1200135:-1:exon
so has part: feature:1198102-1198303:-1:exon
so has part: feature:1197180-1197325:-1:exon
so has part: feature:1196001-1196075:-1:exon
so has part: feature:1194622-1195476:-1:exon
so has part: feature:1193051-1193967:-1:exon
so has part: feature:1188391-1192674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1334621-1334686:-1:exon

position:1334621:-1
position: 1334621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1296806-1296914:-1:exon

position:1296806:-1
position: 1296806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296914:-1
position: 1296914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1283568-1283659:-1:exon

position:1283568:-1
position: 1283568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1283659:-1
position: 1283659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1281957-1282041:-1:exon

position:1281957:-1
position: 1281957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282041:-1
position: 1282041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1257261-1257347:-1:exon

position:1257261:-1
position: 1257261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257347:-1
position: 1257347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1243529-1243666:-1:exon

position:1243529:-1
position: 1243529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243666:-1
position: 1243666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1241703-1241795:-1:exon

position:1241703:-1
position: 1241703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241795:-1
position: 1241795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1239990-1240112:-1:exon

position:1239990:-1
position: 1239990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240112:-1
position: 1240112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1238707-1238784:-1:exon

position:1238707:-1
position: 1238707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238784:-1
position: 1238784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1232691-1232772:-1:exon

position:1232691:-1
position: 1232691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232772:-1
position: 1232772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1215520-1215669:-1:exon

position:1215520:-1
position: 1215520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215669:-1
position: 1215669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1207145-1207247:-1:exon

position:1207145:-1
position: 1207145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207247:-1
position: 1207247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1204324-1204468:-1:exon

position:1204324:-1
position: 1204324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204468:-1
position: 1204468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1203618-1203700:-1:exon

position:1203618:-1
position: 1203618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203700:-1
position: 1203700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1201628-1201735:-1:exon

position:1201628:-1
position: 1201628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201735:-1
position: 1201735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1199990-1200135:-1:exon

position:1199990:-1
position: 1199990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200135:-1
position: 1200135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1198102-1198303:-1:exon

position:1198102:-1
position: 1198102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198303:-1
position: 1198303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1197180-1197325:-1:exon

position:1197180:-1
position: 1197180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1197325:-1
position: 1197325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1196001-1196075:-1:exon

position:1196001:-1
position: 1196001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196075:-1
position: 1196075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1194622-1195476:-1:exon

position:1194622:-1
position: 1194622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1195476:-1
position: 1195476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1193051-1193967:-1:exon

position:1193051:-1
position: 1193051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193967:-1
position: 1193967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1188391-1192674:-1:exon

position:1192674:-1
position: 1192674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGAP32
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARHGAP32
product: Rho GTPase activating protein 32, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_010723589.3
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(1188391..1192674,1193051..1193967,1194622..1195476,1196001..1196075,1197180..1197325,1198102..1198303,1199990..1200135,1201628..1201735,1203618..1203700,1204324..1204468,1207145..1207247,1215520..1215669,1232691..1232772,1238707..1238784,1239990..1240112,1241703..1241795,1243529..1243666,1257261..1257347,1281957..1282041,1282409..1282450,1283568..1283659,1296806..1296914,1334621..1334686))
location: region:1188391-1334686:-1
so has part: feature:1334621-1334686:-1:exon
so has part: feature:1296806-1296914:-1:exon
so has part: feature:1283568-1283659:-1:exon
so has part: feature:1282409-1282450:-1:exon
so has part: feature:1281957-1282041:-1:exon
so has part: feature:1257261-1257347:-1:exon
so has part: feature:1243529-1243666:-1:exon
so has part: feature:1241703-1241795:-1:exon
so has part: feature:1239990-1240112:-1:exon
so has part: feature:1238707-1238784:-1:exon
so has part: feature:1232691-1232772:-1:exon
so has part: feature:1215520-1215669:-1:exon
so has part: feature:1207145-1207247:-1:exon
so has part: feature:1204324-1204468:-1:exon
so has part: feature:1203618-1203700:-1:exon
so has part: feature:1201628-1201735:-1:exon
so has part: feature:1199990-1200135:-1:exon
so has part: feature:1198102-1198303:-1:exon
so has part: feature:1197180-1197325:-1:exon
so has part: feature:1196001-1196075:-1:exon
so has part: feature:1194622-1195476:-1:exon
so has part: feature:1193051-1193967:-1:exon
so has part: feature:1188391-1192674:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1334621-1334686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296806-1296914:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1283568-1283659:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1282409-1282450:-1:exon

position:1282409:-1
position: 1282409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1282450:-1
position: 1282450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1281957-1282041:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1257261-1257347:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1243529-1243666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1241703-1241795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1239990-1240112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1238707-1238784:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1232691-1232772:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1215520-1215669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1207145-1207247:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1204324-1204468:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1203618-1203700:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1201628-1201735:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1199990-1200135:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1198102-1198303:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1197180-1197325:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1196001-1196075:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1194622-1195476:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1193051-1193967:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1188391-1192674:-1:exon

ARHGAP32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 32 isoform X2
translation: MMKSSLHSEEDDFVPELQRSIHPRERPDWEETLSAMARGADIPDITGELPLRTCGSTASMKVKNVKKLSFTKGHFPKMAECAHFHYENVDFGNIQLSLPEEQSEVMRNGCESKELVYLVQISCQGKSWIVKRSYEDFRVLDKHLHLCIYDRRFSQLAELPRSDVLRDSPELVTHTLMAYLSRLSAIACNKINCGPALTWMEIDNKGNHLLVHEESSINIPAIAAAHVIKRYIAQAPDELSFEVGDIVSVIDMPPKELTTWWRGKHGFQVGFFPSECVELINDKVPQSVTNSVPKPVSKKHGKLITFLRSFMKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGQDVPQVLKSCTEFIEKHGIVDGIYRLSGVASNIQKLRHEFDSEQIPDLTKDNYIHDIHSVSSLCKMYFRELPNPLLTYQLYEKFSDAVSAATDEERLVRIHDVIQQLPPPHYRTLEYLMRHLARLADYCTITNMHAKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHTDVLFSSKFSSVIRDGAGHSSLSRPKSLLVSSPSTKLLTLEEAQARTQGQINSPMVTDNRYIEVGEGPAALQGKFHTVIDFPSERKRPPNKMKKSPVGSWRSFFNLGKSSSVSKRKLQRNPSEPSEMKVIALAGGRGDSGTLRSAKSEESLTSLHAVDGESSRFRPRRPRSSSDALSASFNGELLGSMNRCNSYDNLPHDNSDGDKELIHVPALISPRSAEDVDLSPPDIGVASLDFDPMSFQCSPPQTESDCPDSSTSMLESIGISKEKPSLLKKDLESGSQSQTPGSATSSEPVSPFQEKMSPFFTLDLSPTEEKTFQPGDTSPQMGKKPIKSPPLTTSEPVSFALPSCTSESIGGILVTTRNSSTSNWSEEIGITEITNRFPTQMSLPLKETERAAEEEAHQELKHAQIVAAGKPELPEEGERPMSSSQNKTVPSGHAQPGAVALDSPQDPVPVSSVSLIPPPPPKNAARMLALALAESAQQASAQSQKKPGDAHSESTSYGETEAATALEKLHLSAGAPDKLHLYTDLPENQLHFQTSAPVEQDFQASSTAREQNHPPGAPGSQDPQSLHTSVPGDVPARRDAEQEQPSYLAGQMENKEQFPARAEDWEQTRQHAPGALPDWEPPTTDLAMDKPHVHACTSGDKQLTSTCSADDKLETPVTAGEKSTPVPVPYLTTIQTAAAEPNRAPTCQHAAGPALIQADVAGTAAQRTPTGSQPTPPQRQDHQSAVGQVPAASAKASSNSSQVWGAATSEKPPEPASGFATESTSSSHRSSSVPSSHQSRLEKPREGTRAPLLHLRSESVPTHSSYGFTPPVPPVRTLESKIAAAMHSNNTDAINNSNYHAFLASSMLASSVEEVLLPPPAPPPPPLPPPPLAPPPPPKHASLQSMYVPHPKPESVLEPSGPDVYLHHKPTSIHQYRPESVPPHMSYHSKPDQHPAYPPRSETPTSAGTRFNTYTNQGRSASAVYSKPRSRMEFASSVSPTGLRNAAYAEDPPPYPTIRRVQSLHVPTPAASAIRSVPISRTEVPPDDEPLFCPRPLYQYKPYQPHSDYHVTQLQPYFENGRVHYRYSPYSSSSGSSYYTSADGNFYDLDPYSTMRVRPFHPLHSRDFASYEARLHSKGLHRYPGLSAYPRGGLIGHLAGKEHSFISRDVPPAPDIKHMYMSWDLEDMEKYRMQSIRRESRTRQKVKGPLMSQYDNVTPLLPEDPGGPDIIHLRSKSDPGKSGLLTVAEGKEGKYPAKAATPDGDERYYMQHPEPELDRAHYHGAYGNGQPEKPSLPQKQSSIRSRKLHEPTCSASDHRPHLQQEPSHRQPSEPKNGPPYPDYRPKGPEPAEPMGYQHLGRKYILANQDTLRLNHKEVRLAEDRPDVERSRARPGTSIEKHSRDGYKEEEHAASPMAPPPSPERSHSLRVQHRESVEKDSALFYPYQTLGKRQSTMTVMSQYDNVEDYHTMPQHQRGGYAGEGGCVPPAF…
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(1190386..1192674,1193051..1193967,1194622..1195476,1196001..1196075,1197180..1197325,1198102..1198303,1199990..1200135,1201628..1201735,1203618..1203700,1204324..1204468,1207145..1207247,1215520..1215669,1232691..1232772,1238707..1238784,1239990..1240112,1241703..1241795,1243529..1243666,1257261..1257347,1281957..1282041,1283568..1283659,1296806..1296913))
location: region:1190386-1296913:-1
so has part: feature:1296806-1296913:-1:exon
so has part: feature:1283568-1283659:-1:exon
so has part: feature:1281957-1282041:-1:exon
so has part: feature:1257261-1257347:-1:exon
so has part: feature:1243529-1243666:-1:exon
so has part: feature:1241703-1241795:-1:exon
so has part: feature:1239990-1240112:-1:exon
so has part: feature:1238707-1238784:-1:exon
so has part: feature:1232691-1232772:-1:exon
so has part: feature:1215520-1215669:-1:exon
so has part: feature:1207145-1207247:-1:exon
so has part: feature:1204324-1204468:-1:exon
so has part: feature:1203618-1203700:-1:exon
so has part: feature:1201628-1201735:-1:exon
so has part: feature:1199990-1200135:-1:exon
so has part: feature:1198102-1198303:-1:exon
so has part: feature:1197180-1197325:-1:exon
so has part: feature:1196001-1196075:-1:exon
so has part: feature:1194622-1195476:-1:exon
so has part: feature:1193051-1193967:-1:exon
so has part: feature:1190386-1192674:-1:exon

XP_031412718.1
type: Protein
SIO_000068: ncbiprotein

position:1190386:-1
position: 1190386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296913:-1
position: 1296913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296806-1296913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283568-1283659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1281957-1282041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1257261-1257347:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1243529-1243666:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1241703-1241795:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1239990-1240112:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1238707-1238784:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1232691-1232772:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1215520-1215669:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1207145-1207247:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1204324-1204468:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1203618-1203700:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1201628-1201735:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1199990-1200135:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1198102-1198303:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1197180-1197325:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1196001-1196075:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1194622-1195476:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1193051-1193967:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1190386-1192674:-1:exon

ARHGAP32
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARHGAP32
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 32 isoform X1
translation: MMKSSLHSEEDDFVPELQRSIHPRERPDWEETLSAMARGADIPDITGELPLRTCGSTASMKVKNVKKYINPGLMGCDAFHRLSFTKGHFPKMAECAHFHYENVDFGNIQLSLPEEQSEVMRNGCESKELVYLVQISCQGKSWIVKRSYEDFRVLDKHLHLCIYDRRFSQLAELPRSDVLRDSPELVTHTLMAYLSRLSAIACNKINCGPALTWMEIDNKGNHLLVHEESSINIPAIAAAHVIKRYIAQAPDELSFEVGDIVSVIDMPPKELTTWWRGKHGFQVGFFPSECVELINDKVPQSVTNSVPKPVSKKHGKLITFLRSFMKSRPTKQKLKQRGILKERVFGCDLGEHLLNSGQDVPQVLKSCTEFIEKHGIVDGIYRLSGVASNIQKLRHEFDSEQIPDLTKDNYIHDIHSVSSLCKMYFRELPNPLLTYQLYEKFSDAVSAATDEERLVRIHDVIQQLPPPHYRTLEYLMRHLARLADYCTITNMHAKNLAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHTDVLFSSKFSSVIRDGAGHSSLSRPKSLLVSSPSTKLLTLEEAQARTQGQINSPMVTDNRYIEVGEGPAALQGKFHTVIDFPSERKRPPNKMKKSPVGSWRSFFNLGKSSSVSKRKLQRNPSEPSEMKVIALAGGRGDSGTLRSAKSEESLTSLHAVDGESSRFRPRRPRSSSDALSASFNGELLGSMNRCNSYDNLPHDNSDGDKELIHVPALISPRSAEDVDLSPPDIGVASLDFDPMSFQCSPPQTESDCPDSSTSMLESIGISKEKPSLLKKDLESGSQSQTPGSATSSEPVSPFQEKMSPFFTLDLSPTEEKTFQPGDTSPQMGKKPIKSPPLTTSEPVSFALPSCTSESIGGILVTTRNSSTSNWSEEIGITEITNRFPTQMSLPLKETERAAEEEAHQELKHAQIVAAGKPELPEEGERPMSSSQNKTVPSGHAQPGAVALDSPQDPVPVSSVSLIPPPPPKNAARMLALALAESAQQASAQSQKKPGDAHSESTSYGETEAATALEKLHLSAGAPDKLHLYTDLPENQLHFQTSAPVEQDFQASSTAREQNHPPGAPGSQDPQSLHTSVPGDVPARRDAEQEQPSYLAGQMENKEQFPARAEDWEQTRQHAPGALPDWEPPTTDLAMDKPHVHACTSGDKQLTSTCSADDKLETPVTAGEKSTPVPVPYLTTIQTAAAEPNRAPTCQHAAGPALIQADVAGTAAQRTPTGSQPTPPQRQDHQSAVGQVPAASAKASSNSSQVWGAATSEKPPEPASGFATESTSSSHRSSSVPSSHQSRLEKPREGTRAPLLHLRSESVPTHSSYGFTPPVPPVRTLESKIAAAMHSNNTDAINNSNYHAFLASSMLASSVEEVLLPPPAPPPPPLPPPPLAPPPPPKHASLQSMYVPHPKPESVLEPSGPDVYLHHKPTSIHQYRPESVPPHMSYHSKPDQHPAYPPRSETPTSAGTRFNTYTNQGRSASAVYSKPRSRMEFASSVSPTGLRNAAYAEDPPPYPTIRRVQSLHVPTPAASAIRSVPISRTEVPPDDEPLFCPRPLYQYKPYQPHSDYHVTQLQPYFENGRVHYRYSPYSSSSGSSYYTSADGNFYDLDPYSTMRVRPFHPLHSRDFASYEARLHSKGLHRYPGLSAYPRGGLIGHLAGKEHSFISRDVPPAPDIKHMYMSWDLEDMEKYRMQSIRRESRTRQKVKGPLMSQYDNVTPLLPEDPGGPDIIHLRSKSDPGKSGLLTVAEGKEGKYPAKAATPDGDERYYMQHPEPELDRAHYHGAYGNGQPEKPSLPQKQSSIRSRKLHEPTCSASDHRPHLQQEPSHRQPSEPKNGPPYPDYRPKGPEPAEPMGYQHLGRKYILANQDTLRLNHKEVRLAEDRPDVERSRARPGTSIEKHSRDGYKEEEHAASPMAPPPSPERSHSLRVQHRESVEKDSALFYPYQTLGKRQSTMTVMSQYDNVEDYHTMPQHQR…
SIO_010081: ARHGAP32
subclass of: SO_0000673
so part of: ARHGAP32
location: complement(join(1190386..1192674,1193051..1193967,1194622..1195476,1196001..1196075,1197180..1197325,1198102..1198303,1199990..1200135,1201628..1201735,1203618..1203700,1204324..1204468,1207145..1207247,1215520..1215669,1232691..1232772,1238707..1238784,1239990..1240112,1241703..1241795,1243529..1243666,1257261..1257347,1281957..1282041,1282409..1282450,1283568..1283659,1296806..1296913))
location: region:1190386-1296913:-1
so has part: feature:1296806-1296913:-1:exon
so has part: feature:1283568-1283659:-1:exon
so has part: feature:1282409-1282450:-1:exon
so has part: feature:1281957-1282041:-1:exon
so has part: feature:1257261-1257347:-1:exon
so has part: feature:1243529-1243666:-1:exon
so has part: feature:1241703-1241795:-1:exon
so has part: feature:1239990-1240112:-1:exon
so has part: feature:1238707-1238784:-1:exon
so has part: feature:1232691-1232772:-1:exon
so has part: feature:1215520-1215669:-1:exon
so has part: feature:1207145-1207247:-1:exon
so has part: feature:1204324-1204468:-1:exon
so has part: feature:1203618-1203700:-1:exon
so has part: feature:1201628-1201735:-1:exon
so has part: feature:1199990-1200135:-1:exon
so has part: feature:1198102-1198303:-1:exon
so has part: feature:1197180-1197325:-1:exon
so has part: feature:1196001-1196075:-1:exon
so has part: feature:1194622-1195476:-1:exon
so has part: feature:1193051-1193967:-1:exon
so has part: feature:1190386-1192674:-1:exon

XP_010721891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1296806-1296913:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1283568-1283659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282409-1282450:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1281957-1282041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1257261-1257347:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1243529-1243666:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1241703-1241795:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1239990-1240112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1238707-1238784:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1232691-1232772:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1215520-1215669:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1207145-1207247:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1204324-1204468:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1203618-1203700:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1201628-1201735:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1199990-1200135:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1198102-1198303:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1197180-1197325:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1196001-1196075:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1194622-1195476:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1193051-1193967:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1190386-1192674:-1:exon

BARX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1389805..1417401
location: region:1389805-1417401:1
so has part: feature:1389805-1417401:1:exon
subclass of: SO_0000010

100546581
type: Gene
SIO_000068: ncbigene

position:1389805:1
position: 1389805
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1417401:1
position: 1417401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389805-1417401:1:exon

BARX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: BARX2
product: BARX homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_003212671.4
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: join(<1389805..1389949,1412252..1412546,1415306..1415390,1416110..1417401)
location: region:1389805-1417401:1
so has part: feature:1389805-1389949:1:exon
so has part: feature:1412252-1412546:1:exon
so has part: feature:1415306-1415390:1:exon
so has part: feature:1416110-1417401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1389805-1389949:1:exon

position:1389949:1
position: 1389949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1412252-1412546:1:exon

position:1412252:1
position: 1412252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412546:1
position: 1412546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1415306-1415390:1:exon

position:1415306:1
position: 1415306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415390:1
position: 1415390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1416110-1417401:1:exon

position:1416110:1
position: 1416110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BARX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: BARX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein BarH-like 2
translation: AKAGRRRYKTFMIDEILSKETCDYFEKLSLYSVCPSLLVRPKPLHSCAGSPSLRAYPLISVITRQPSVVPHLVPAATSSHVLPAQTSATASSETPASETHGSSESEAEQPTPRLKKPRRSRTIFTELQLMGLEKKFQKQKYLSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLKGGQEAPTKPKGRPKKNSIPTSEEIEAEEKMNSQAQSQEAEGSQAPEEPKVAEEKPEVSLETEKSPEHIPEPSSEEATPLS
SIO_010081: BARX2
subclass of: SO_0000673
so part of: BARX2
location: join(<1389805..1389949,1412252..1412546,1415306..1415390,1416110..1416361)
location: region:1389805-1416361:1
so has part: feature:1389805-1389949:1:exon
so has part: feature:1412252-1412546:1:exon
so has part: feature:1415306-1415390:1:exon
so has part: feature:1416110-1416361:1:exon

XP_003212719.3
type: Protein
SIO_000068: ncbiprotein

position:1416361:1
position: 1416361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389805-1389949:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1412252-1412546:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1415306-1415390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1416110-1416361:1:exon

LOC100546734
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1459338..1468124
location: region:1459338-1468124:1
so has part: feature:1459338-1468124:1:exon
subclass of: SO_0000010

100546734
type: Gene
SIO_000068: ncbigene

position:1459338:1
position: 1459338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1468124:1
position: 1468124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459338-1468124:1:exon

LOC100546734
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546734
product: transmembrane protein 45B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_003212672.4
SIO_010081: LOC100546734
subclass of: SO_0000673
so part of: LOC100546734
location: join(1459338..1459432,1464056..1464257,1464547..1464759,1465721..1465905,1466812..1466957,1467460..1468124)
location: region:1459338-1468124:1
so has part: feature:1459338-1459432:1:exon
so has part: feature:1464056-1464257:1:exon
so has part: feature:1464547-1464759:1:exon
so has part: feature:1465721-1465905:1:exon
so has part: feature:1466812-1466957:1:exon
so has part: feature:1467460-1468124:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1459338-1459432:1:exon

position:1459432:1
position: 1459432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1464056-1464257:1:exon

position:1464056:1
position: 1464056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464257:1
position: 1464257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1464547-1464759:1:exon

position:1464547:1
position: 1464547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464759:1
position: 1464759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1465721-1465905:1:exon

position:1465721:1
position: 1465721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465905:1
position: 1465905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1466812-1466957:1:exon

position:1466812:1
position: 1466812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466957:1
position: 1466957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1467460-1468124:1:exon

position:1467460:1
position: 1467460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100546734
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B
translation: MANFKGHALPGSFFLVFGLWWSVKYPLRYLSQKASKKSKNNYCFQRVDAIEGGVKITFALIGMLAEQFVPDGPHLYLYSGEKRDWVKLMNWQHTTMYLFYGLSGVVDIFTYVCSTVPRGLDRLMLSVAVFVEGCLFYYHVLHRPMLDQHIHSLLLIAIFSGACSTMLEVFLRDNIVLEMFRAGVTIVQGTWFWQVGVVLFQPWGGPMWDESDHSNIMFLTMCFFWHWAAAVVILAVNYSIAYSCMQRCGRSSGEPYISLGVRKQKGDMGSQAAFLNGSDEE
SIO_010081: LOC100546734
subclass of: SO_0000673
so part of: LOC100546734
location: join(1464074..1464257,1464547..1464759,1465721..1465905,1466812..1466957,1467460..1467577)
location: region:1464074-1467577:1
so has part: feature:1464074-1464257:1:exon
so has part: feature:1464547-1464759:1:exon
so has part: feature:1465721-1465905:1:exon
so has part: feature:1466812-1466957:1:exon
so has part: feature:1467460-1467577:1:exon

XP_003212720.1
type: Protein
SIO_000068: ncbiprotein

position:1464074:1
position: 1464074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467577:1
position: 1467577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1464074-1464257:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1464547-1464759:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465721-1465905:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466812-1466957:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1467460-1467577:1:exon

LOC100546884
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1471727..1477486
location: region:1471727-1477486:1
so has part: feature:1471727-1477486:1:exon
subclass of: SO_0000010

100546884
type: Gene
SIO_000068: ncbigene

position:1471727:1
position: 1471727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477486:1
position: 1477486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471727-1477486:1:exon

LOC100546884
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546884
product: transmembrane protein 45B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031556859.1
SIO_010081: LOC100546884
subclass of: SO_0000673
so part of: LOC100546884
location: join(1471727..1472242,1474556..1474760,1475002..1475214,1475704..1475888,1476273..1476418,1476624..1477486)
location: region:1471727-1477486:1
so has part: feature:1471727-1472242:1:exon
so has part: feature:1474556-1474760:1:exon
so has part: feature:1475002-1475214:1:exon
so has part: feature:1475704-1475888:1:exon
so has part: feature:1476273-1476418:1:exon
so has part: feature:1476624-1477486:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1471727-1472242:1:exon

position:1472242:1
position: 1472242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1474556-1474760:1:exon

position:1474556:1
position: 1474556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1474760:1
position: 1474760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1475002-1475214:1:exon

position:1475002:1
position: 1475002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475214:1
position: 1475214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1475704-1475888:1:exon

position:1475704:1
position: 1475704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475888:1
position: 1475888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1476273-1476418:1:exon

position:1476273:1
position: 1476273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476418:1
position: 1476418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1476624-1477486:1:exon

position:1476624:1
position: 1476624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100546884
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 45B-like
translation: MPTSFLGSALRGTFFFIFGLWWSVRYPLKYLRRKTNAENQPSYGLRRVEVFEGAVKAFFALAGILVEQFVPSGPHLMLYSPKTHSWTDLTHWHYTTMYLFFLLSGIVDVVSHSPLKLPLGLDRLSLSVALFMEGLLFCFRNYGDAALDQHLHSLLAFAIFAGALCVLLEVFLRDHIILECLRTSTFLLQGSWLWQIGFVLSPPWGGPGWDQTDSSNFSFLTMCFCWHYAGALITLAANAAVSRCCNESCQLRFGDIDVELDCGLCIRKKGSGGALLPEGGTEEK
SIO_010081: LOC100546884
subclass of: SO_0000673
so part of: LOC100546884
location: join(1474574..1474760,1475002..1475214,1475704..1475888,1476273..1476418,1476624..1476747)
location: region:1474574-1476747:1
so has part: feature:1474574-1474760:1:exon
so has part: feature:1475002-1475214:1:exon
so has part: feature:1475704-1475888:1:exon
so has part: feature:1476273-1476418:1:exon
so has part: feature:1476624-1476747:1:exon

XP_031412719.1
type: Protein
SIO_000068: ncbiprotein

position:1474574:1
position: 1474574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1476747:1
position: 1476747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1474574-1474760:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1475002-1475214:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1475704-1475888:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1476273-1476418:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1476624-1476747:1:exon

LOC109370994
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370994
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1477857..1481931
location: region:1477857-1481931:1
so has part: feature:1477857-1481931:1:exon
subclass of: SO_0000011

109370994
type: Gene
SIO_000068: ncbigene

position:1477857:1
position: 1477857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1481931:1
position: 1481931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1477857-1481931:1:exon

LOC109370994
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370994
product: uncharacterized LOC109370994
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004161998.1
SIO_010081: LOC109370994
subclass of: SO_0000673
so part of: LOC109370994
location: join(1477857..1477994,1478626..1478789,1479752..1479834,1479947..1481931)
location: region:1477857-1481931:1
so has part: feature:1477857-1477994:1:exon
so has part: feature:1478626-1478789:1:exon
so has part: feature:1479752-1479834:1:exon
so has part: feature:1479947-1481931:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1477857-1477994:1:exon

position:1477994:1
position: 1477994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1478626-1478789:1:exon

position:1478626:1
position: 1478626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1478789:1
position: 1478789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1479752-1479834:1:exon

position:1479752:1
position: 1479752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1479834:1
position: 1479834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1479947-1481931:1:exon

position:1479947:1
position: 1479947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APLP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1483975..1506526)
location: region:1483975-1506526:-1
so has part: feature:1483975-1506526:-1:exon
subclass of: SO_0000010

100545238
type: Gene
SIO_000068: ncbigene

position:1483975:-1
position: 1483975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506526:-1
position: 1506526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483975-1506526:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 155 samples with support for all annotated introns
transcript id: XM_010723597.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1483975..1485500,1486291..1486446,1486879..1486953,1487749..1487833,1490598..1490631,1491232..1491402,1491962..1492061,1493527..1493655,1494066..1494224,1495417..1495491,1495700..1495815,1499602..1499819,1500338..1500513,1502010..1502122,1504890..1505019,1506203..1506526))
location: region:1483975-1506526:-1
so has part: feature:1506203-1506526:-1:exon
so has part: feature:1504890-1505019:-1:exon
so has part: feature:1502010-1502122:-1:exon
so has part: feature:1500338-1500513:-1:exon
so has part: feature:1499602-1499819:-1:exon
so has part: feature:1495700-1495815:-1:exon
so has part: feature:1495417-1495491:-1:exon
so has part: feature:1494066-1494224:-1:exon
so has part: feature:1493527-1493655:-1:exon
so has part: feature:1491962-1492061:-1:exon
so has part: feature:1491232-1491402:-1:exon
so has part: feature:1490598-1490631:-1:exon
so has part: feature:1487749-1487833:-1:exon
so has part: feature:1486879-1486953:-1:exon
so has part: feature:1486291-1486446:-1:exon
so has part: feature:1483975-1485500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1506203-1506526:-1:exon

position:1506203:-1
position: 1506203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1504890-1505019:-1:exon

position:1504890:-1
position: 1504890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505019:-1
position: 1505019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1502010-1502122:-1:exon

position:1502010:-1
position: 1502010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502122:-1
position: 1502122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1500338-1500513:-1:exon

position:1500338:-1
position: 1500338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500513:-1
position: 1500513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1499602-1499819:-1:exon

position:1499602:-1
position: 1499602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499819:-1
position: 1499819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1495700-1495815:-1:exon

position:1495700:-1
position: 1495700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495815:-1
position: 1495815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1495417-1495491:-1:exon

position:1495417:-1
position: 1495417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495491:-1
position: 1495491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1494066-1494224:-1:exon

position:1494066:-1
position: 1494066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494224:-1
position: 1494224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1493527-1493655:-1:exon

position:1493527:-1
position: 1493527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493655:-1
position: 1493655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1491962-1492061:-1:exon

position:1491962:-1
position: 1491962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492061:-1
position: 1492061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1491232-1491402:-1:exon

position:1491232:-1
position: 1491232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1491402:-1
position: 1491402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1490598-1490631:-1:exon

position:1490598:-1
position: 1490598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1490631:-1
position: 1490631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1487749-1487833:-1:exon

position:1487749:-1
position: 1487749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487833:-1
position: 1487833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1486879-1486953:-1:exon

position:1486879:-1
position: 1486879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486953:-1
position: 1486953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1486291-1486446:-1:exon

position:1486291:-1
position: 1486291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1486446:-1
position: 1486446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1483975-1485500:-1:exon

position:1485500:-1
position: 1485500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_031556860.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1483975..1485500,1486291..1486446,1486879..1486953,1487752..1487831,1491232..1491402,1491962..1492061,1493527..1493655,1494066..1494224,1495417..1495491,1495700..1495815,1497827..1497994,1499602..1499819,1500338..1500513,1502010..1502122,1504890..1505019,1506203..1506526))
location: region:1483975-1506526:-1
so has part: feature:1506203-1506526:-1:exon
so has part: feature:1504890-1505019:-1:exon
so has part: feature:1502010-1502122:-1:exon
so has part: feature:1500338-1500513:-1:exon
so has part: feature:1499602-1499819:-1:exon
so has part: feature:1497827-1497994:-1:exon
so has part: feature:1495700-1495815:-1:exon
so has part: feature:1495417-1495491:-1:exon
so has part: feature:1494066-1494224:-1:exon
so has part: feature:1493527-1493655:-1:exon
so has part: feature:1491962-1492061:-1:exon
so has part: feature:1491232-1491402:-1:exon
so has part: feature:1487752-1487831:-1:exon
so has part: feature:1486879-1486953:-1:exon
so has part: feature:1486291-1486446:-1:exon
so has part: feature:1483975-1485500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1506203-1506526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504890-1505019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502010-1502122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1500338-1500513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499602-1499819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497827-1497994:-1:exon

position:1497827:-1
position: 1497827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497994:-1
position: 1497994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1495700-1495815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495417-1495491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1494066-1494224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1493527-1493655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1491962-1492061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1491232-1491402:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1487752-1487831:-1:exon

position:1487752:-1
position: 1487752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1487831:-1
position: 1487831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1486879-1486953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1486291-1486446:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483975-1485500:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010723596.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1483975..1485500,1486291..1486446,1486879..1486953,1487749..1487831,1491232..1491402,1491962..1492061,1493527..1493655,1494066..1494224,1495417..1495491,1495700..1495815,1497827..1497994,1499602..1499819,1500338..1500513,1502010..1502122,1504890..1505019,1506203..1506526))
location: region:1483975-1506526:-1
so has part: feature:1506203-1506526:-1:exon
so has part: feature:1504890-1505019:-1:exon
so has part: feature:1502010-1502122:-1:exon
so has part: feature:1500338-1500513:-1:exon
so has part: feature:1499602-1499819:-1:exon
so has part: feature:1497827-1497994:-1:exon
so has part: feature:1495700-1495815:-1:exon
so has part: feature:1495417-1495491:-1:exon
so has part: feature:1494066-1494224:-1:exon
so has part: feature:1493527-1493655:-1:exon
so has part: feature:1491962-1492061:-1:exon
so has part: feature:1491232-1491402:-1:exon
so has part: feature:1487749-1487831:-1:exon
so has part: feature:1486879-1486953:-1:exon
so has part: feature:1486291-1486446:-1:exon
so has part: feature:1483975-1485500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1506203-1506526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504890-1505019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502010-1502122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1500338-1500513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499602-1499819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497827-1497994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1495700-1495815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495417-1495491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1494066-1494224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1493527-1493655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1491962-1492061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1491232-1491402:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1487749-1487831:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1486879-1486953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1486291-1486446:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1483975-1485500:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 154 samples with support for all annotated introns
transcript id: XM_010723595.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1483975..1485500,1486291..1486446,1486879..1486953,1487752..1487833,1490598..1490631,1491232..1491402,1491962..1492061,1493527..1493655,1494066..1494224,1495417..1495491,1495700..1495815,1497827..1497994,1499602..1499819,1500338..1500513,1502010..1502122,1504890..1505019,1506203..1506526))
location: region:1483975-1506526:-1
so has part: feature:1506203-1506526:-1:exon
so has part: feature:1504890-1505019:-1:exon
so has part: feature:1502010-1502122:-1:exon
so has part: feature:1500338-1500513:-1:exon
so has part: feature:1499602-1499819:-1:exon
so has part: feature:1497827-1497994:-1:exon
so has part: feature:1495700-1495815:-1:exon
so has part: feature:1495417-1495491:-1:exon
so has part: feature:1494066-1494224:-1:exon
so has part: feature:1493527-1493655:-1:exon
so has part: feature:1491962-1492061:-1:exon
so has part: feature:1491232-1491402:-1:exon
so has part: feature:1490598-1490631:-1:exon
so has part: feature:1487752-1487833:-1:exon
so has part: feature:1486879-1486953:-1:exon
so has part: feature:1486291-1486446:-1:exon
so has part: feature:1483975-1485500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1506203-1506526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504890-1505019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502010-1502122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1500338-1500513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499602-1499819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497827-1497994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1495700-1495815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495417-1495491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1494066-1494224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1493527-1493655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1491962-1492061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1491232-1491402:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1490598-1490631:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1487752-1487833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1486879-1486953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1486291-1486446:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1483975-1485500:-1:exon

APLP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: APLP2
product: amyloid beta precursor like protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 154 samples with support for all annotated introns
transcript id: XM_010723594.1
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1483975..1485500,1486291..1486446,1486879..1486953,1487749..1487833,1490598..1490631,1491232..1491402,1491962..1492061,1493527..1493655,1494066..1494224,1495417..1495491,1495700..1495815,1497827..1497994,1499602..1499819,1500338..1500513,1502010..1502122,1504890..1505019,1506203..1506526))
location: region:1483975-1506526:-1
so has part: feature:1506203-1506526:-1:exon
so has part: feature:1504890-1505019:-1:exon
so has part: feature:1502010-1502122:-1:exon
so has part: feature:1500338-1500513:-1:exon
so has part: feature:1499602-1499819:-1:exon
so has part: feature:1497827-1497994:-1:exon
so has part: feature:1495700-1495815:-1:exon
so has part: feature:1495417-1495491:-1:exon
so has part: feature:1494066-1494224:-1:exon
so has part: feature:1493527-1493655:-1:exon
so has part: feature:1491962-1492061:-1:exon
so has part: feature:1491232-1491402:-1:exon
so has part: feature:1490598-1490631:-1:exon
so has part: feature:1487749-1487833:-1:exon
so has part: feature:1486879-1486953:-1:exon
so has part: feature:1486291-1486446:-1:exon
so has part: feature:1483975-1485500:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1506203-1506526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504890-1505019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502010-1502122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1500338-1500513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499602-1499819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497827-1497994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1495700-1495815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495417-1495491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1494066-1494224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1493527-1493655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1491962-1492061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1491232-1491402:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1490598-1490631:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1487749-1487833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1486879-1486953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1486291-1486446:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1483975-1485500:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X5
translation: MYLQDFAEGSESSLLEMPEPFWCFELFCFLSGKAISLCRFSLSSQALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDTSGTKSCFGTKEEILQYCQEMYPDLQITNVVEANQPVSIDSWCKRGKKQCKDHTHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTAAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKIVDEALSKEEEDEDEDEDYDTYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEDVVEDRDYYYDSYKVDDYNEETTTEPTSDKAVSEKEVSSDMKLPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAILNDRRRIALENYLAALQAVPPRPHRIVQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLRVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPMEGKPFRPFQVKTFPAVPENEDPQPDLYHPMKKGSGMTELDGLIGAEEKVINSKKKVDENVVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1485399..1485500,1486291..1486446,1486879..1486953,1487749..1487833,1490598..1490631,1491232..1491402,1491962..1492061,1493527..1493655,1494066..1494224,1495417..1495491,1495700..1495815,1499602..1499819,1500338..1500513,1502010..1502122,1504890..1505019,1506203..1506511))
location: region:1485399-1506511:-1
so has part: feature:1506203-1506511:-1:exon
so has part: feature:1504890-1505019:-1:exon
so has part: feature:1502010-1502122:-1:exon
so has part: feature:1500338-1500513:-1:exon
so has part: feature:1499602-1499819:-1:exon
so has part: feature:1495700-1495815:-1:exon
so has part: feature:1495417-1495491:-1:exon
so has part: feature:1494066-1494224:-1:exon
so has part: feature:1493527-1493655:-1:exon
so has part: feature:1491962-1492061:-1:exon
so has part: feature:1491232-1491402:-1:exon
so has part: feature:1490598-1490631:-1:exon
so has part: feature:1487749-1487833:-1:exon
so has part: feature:1486879-1486953:-1:exon
so has part: feature:1486291-1486446:-1:exon
so has part: feature:1485399-1485500:-1:exon

XP_010721899.1
type: Protein
SIO_000068: ncbiprotein

position:1485399:-1
position: 1485399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506511:-1
position: 1506511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506203-1506511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504890-1505019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502010-1502122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1500338-1500513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499602-1499819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1495700-1495815:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1495417-1495491:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1494066-1494224:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1493527-1493655:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1491962-1492061:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1491232-1491402:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1490598-1490631:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1487749-1487833:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1486879-1486953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1486291-1486446:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1485399-1485500:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X4
translation: MYLQDFAEGSESSLLEMPEPFWCFELFCFLSGKAISLCRFSLSSQALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDTSGTKSCFGTKEEILQYCQEMYPDLQITNVVEANQPVSIDSWCKRGKKQCKDHTHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTAAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKIVDEALSKEEEDEDEDEDYDTYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEDVVEDRDYYYDSYKVDDYNEETTTEPTSDKAVSEKEVSSDMKSVCSQEAMTGPCRAVMPRWYFDSNKRKCIRFIYGGCGGNRNNFESEEYCMAVCKKMMPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAILNDRRRIALENYLAALQAVPPRPHRIVQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLRVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPMEGKPFRPFQVKTFPAVPENEGSGMTELDGLIGAEEKVINSKKKVDENVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1485399..1485500,1486291..1486446,1486879..1486953,1487752..1487831,1491232..1491402,1491962..1492061,1493527..1493655,1494066..1494224,1495417..1495491,1495700..1495815,1497827..1497994,1499602..1499819,1500338..1500513,1502010..1502122,1504890..1505019,1506203..1506511))
location: region:1485399-1506511:-1
so has part: feature:1506203-1506511:-1:exon
so has part: feature:1504890-1505019:-1:exon
so has part: feature:1502010-1502122:-1:exon
so has part: feature:1500338-1500513:-1:exon
so has part: feature:1499602-1499819:-1:exon
so has part: feature:1497827-1497994:-1:exon
so has part: feature:1495700-1495815:-1:exon
so has part: feature:1495417-1495491:-1:exon
so has part: feature:1494066-1494224:-1:exon
so has part: feature:1493527-1493655:-1:exon
so has part: feature:1491962-1492061:-1:exon
so has part: feature:1491232-1491402:-1:exon
so has part: feature:1487752-1487831:-1:exon
so has part: feature:1486879-1486953:-1:exon
so has part: feature:1486291-1486446:-1:exon
so has part: feature:1485399-1485500:-1:exon

XP_031412720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1506203-1506511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504890-1505019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502010-1502122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1500338-1500513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499602-1499819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497827-1497994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1495700-1495815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495417-1495491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1494066-1494224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1493527-1493655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1491962-1492061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1491232-1491402:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1487752-1487831:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1486879-1486953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1486291-1486446:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1485399-1485500:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X3
translation: MYLQDFAEGSESSLLEMPEPFWCFELFCFLSGKAISLCRFSLSSQALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDTSGTKSCFGTKEEILQYCQEMYPDLQITNVVEANQPVSIDSWCKRGKKQCKDHTHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTAAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKIVDEALSKEEEDEDEDEDYDTYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEDVVEDRDYYYDSYKVDDYNEETTTEPTSDKAVSEKEVSSDMKSVCSQEAMTGPCRAVMPRWYFDSNKRKCIRFIYGGCGGNRNNFESEEYCMAVCKKMMPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAILNDRRRIALENYLAALQAVPPRPHRIVQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLRVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPMEGKPFRPFQVKTFPAVPENEGSGMTELDGLIGAEEKVINSKKKVDENVVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1485399..1485500,1486291..1486446,1486879..1486953,1487749..1487831,1491232..1491402,1491962..1492061,1493527..1493655,1494066..1494224,1495417..1495491,1495700..1495815,1497827..1497994,1499602..1499819,1500338..1500513,1502010..1502122,1504890..1505019,1506203..1506511))
location: region:1485399-1506511:-1
so has part: feature:1506203-1506511:-1:exon
so has part: feature:1504890-1505019:-1:exon
so has part: feature:1502010-1502122:-1:exon
so has part: feature:1500338-1500513:-1:exon
so has part: feature:1499602-1499819:-1:exon
so has part: feature:1497827-1497994:-1:exon
so has part: feature:1495700-1495815:-1:exon
so has part: feature:1495417-1495491:-1:exon
so has part: feature:1494066-1494224:-1:exon
so has part: feature:1493527-1493655:-1:exon
so has part: feature:1491962-1492061:-1:exon
so has part: feature:1491232-1491402:-1:exon
so has part: feature:1487749-1487831:-1:exon
so has part: feature:1486879-1486953:-1:exon
so has part: feature:1486291-1486446:-1:exon
so has part: feature:1485399-1485500:-1:exon

XP_010721898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1506203-1506511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504890-1505019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502010-1502122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1500338-1500513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499602-1499819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497827-1497994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1495700-1495815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495417-1495491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1494066-1494224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1493527-1493655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1491962-1492061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1491232-1491402:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1487749-1487831:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1486879-1486953:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1486291-1486446:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1485399-1485500:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X2
translation: MYLQDFAEGSESSLLEMPEPFWCFELFCFLSGKAISLCRFSLSSQALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDTSGTKSCFGTKEEILQYCQEMYPDLQITNVVEANQPVSIDSWCKRGKKQCKDHTHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTAAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKIVDEALSKEEEDEDEDEDYDTYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEDVVEDRDYYYDSYKVDDYNEETTTEPTSDKAVSEKEVSSDMKSVCSQEAMTGPCRAVMPRWYFDSNKRKCIRFIYGGCGGNRNNFESEEYCMAVCKKMMPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAILNDRRRIALENYLAALQAVPPRPHRIVQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLRVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPMEGKPFRPFQVKTFPAVPENEDPQPDLYHPMKKGSGMTELDGLIGAEEKVINSKKKVDENVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1485399..1485500,1486291..1486446,1486879..1486953,1487752..1487833,1490598..1490631,1491232..1491402,1491962..1492061,1493527..1493655,1494066..1494224,1495417..1495491,1495700..1495815,1497827..1497994,1499602..1499819,1500338..1500513,1502010..1502122,1504890..1505019,1506203..1506511))
location: region:1485399-1506511:-1
so has part: feature:1506203-1506511:-1:exon
so has part: feature:1504890-1505019:-1:exon
so has part: feature:1502010-1502122:-1:exon
so has part: feature:1500338-1500513:-1:exon
so has part: feature:1499602-1499819:-1:exon
so has part: feature:1497827-1497994:-1:exon
so has part: feature:1495700-1495815:-1:exon
so has part: feature:1495417-1495491:-1:exon
so has part: feature:1494066-1494224:-1:exon
so has part: feature:1493527-1493655:-1:exon
so has part: feature:1491962-1492061:-1:exon
so has part: feature:1491232-1491402:-1:exon
so has part: feature:1490598-1490631:-1:exon
so has part: feature:1487752-1487833:-1:exon
so has part: feature:1486879-1486953:-1:exon
so has part: feature:1486291-1486446:-1:exon
so has part: feature:1485399-1485500:-1:exon

XP_010721897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1506203-1506511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504890-1505019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502010-1502122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1500338-1500513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499602-1499819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497827-1497994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1495700-1495815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495417-1495491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1494066-1494224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1493527-1493655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1491962-1492061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1491232-1491402:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1490598-1490631:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1487752-1487833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1486879-1486953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1486291-1486446:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1485399-1485500:-1:exon

APLP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: APLP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: amyloid-like protein 2 isoform X1
translation: MYLQDFAEGSESSLLEMPEPFWCFELFCFLSGKAISLCRFSLSSQALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDTSGTKSCFGTKEEILQYCQEMYPDLQITNVVEANQPVSIDSWCKRGKKQCKDHTHIVVPYKCLVGEFVSDVLLVPEKCRFFHKERMDVCESHQHWHTAAKEACLTEGMILHSYGMLLPCGVDQFHGTEYVCCPQTKIVDEALSKEEEDEDEDEDYDTYKSEFPTEAGVEDFTGTAVEEDEDEEDEGEEEEDVVEDRDYYYDSYKVDDYNEETTTEPTSDKAVSEKEVSSDMKSVCSQEAMTGPCRAVMPRWYFDSNKRKCIRFIYGGCGGNRNNFESEEYCMAVCKKMMPTDDVDVYFETPADDNEHARFQKAKEQLEVRHHNRMDRVKKEWEEAEHQAVNLPKAERQTLIQHFQAMVKSLEKEAASEKQQLVETHLARVEAILNDRRRIALENYLAALQAVPPRPHRIVQALKRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLRVIEERMNQSLSLLYKVPYVAEEIQDEIDELLQEQRADMDQFTSSISESQVDVRVSSEESEEIPMEGKPFRPFQVKTFPAVPENEDPQPDLYHPMKKGSGMTELDGLIGAEEKVINSKKKVDENVVIDETLDVKEMIFNAERVGGLVDEPDNDNSLRDDFSFSSSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLSKMQNHGYENPTYKYLEQMQI
SIO_010081: APLP2
subclass of: SO_0000673
so part of: APLP2
location: complement(join(1485399..1485500,1486291..1486446,1486879..1486953,1487749..1487833,1490598..1490631,1491232..1491402,1491962..1492061,1493527..1493655,1494066..1494224,1495417..1495491,1495700..1495815,1497827..1497994,1499602..1499819,1500338..1500513,1502010..1502122,1504890..1505019,1506203..1506511))
location: region:1485399-1506511:-1
so has part: feature:1506203-1506511:-1:exon
so has part: feature:1504890-1505019:-1:exon
so has part: feature:1502010-1502122:-1:exon
so has part: feature:1500338-1500513:-1:exon
so has part: feature:1499602-1499819:-1:exon
so has part: feature:1497827-1497994:-1:exon
so has part: feature:1495700-1495815:-1:exon
so has part: feature:1495417-1495491:-1:exon
so has part: feature:1494066-1494224:-1:exon
so has part: feature:1493527-1493655:-1:exon
so has part: feature:1491962-1492061:-1:exon
so has part: feature:1491232-1491402:-1:exon
so has part: feature:1490598-1490631:-1:exon
so has part: feature:1487749-1487833:-1:exon
so has part: feature:1486879-1486953:-1:exon
so has part: feature:1486291-1486446:-1:exon
so has part: feature:1485399-1485500:-1:exon

XP_010721896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1506203-1506511:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1504890-1505019:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502010-1502122:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1500338-1500513:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499602-1499819:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1497827-1497994:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1495700-1495815:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1495417-1495491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1494066-1494224:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1493527-1493655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1491962-1492061:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1491232-1491402:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1490598-1490631:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1487749-1487833:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1486879-1486953:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1486291-1486446:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1485399-1485500:-1:exon

PRDM10
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1543434..1582121
location: region:1543434-1582121:1
so has part: feature:1543434-1582121:1:exon
subclass of: SO_0000010

100547040
type: Gene
SIO_000068: ncbigene

position:1543434:1
position: 1543434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582121:1
position: 1582121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1543434-1582121:1:exon

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PRDM10
product: PR/SET domain 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 135 samples with support for all annotated introns
transcript id: XM_031556861.1
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(1543434..1549397,1551723..1551912,1553921..1554085,1555484..1555543,1557991..1558110,1559050..1559257,1559607..1559848,1560800..1561003,1562926..1562998,1563440..1563557,1564423..1564552,1566659..1566886,1570491..1570838,1571190..1571345,1572330..1572509,1573191..1573301,1574370..1574570,1575141..1575284,1576375..1576545,1576727..1576867,1577668..1577836,1578305..1578417,1578873..1582121)
location: region:1543434-1582121:1
so has part: feature:1543434-1549397:1:exon
so has part: feature:1551723-1551912:1:exon
so has part: feature:1553921-1554085:1:exon
so has part: feature:1555484-1555543:1:exon
so has part: feature:1557991-1558110:1:exon
so has part: feature:1559050-1559257:1:exon
so has part: feature:1559607-1559848:1:exon
so has part: feature:1560800-1561003:1:exon
so has part: feature:1562926-1562998:1:exon
so has part: feature:1563440-1563557:1:exon
so has part: feature:1564423-1564552:1:exon
so has part: feature:1566659-1566886:1:exon
so has part: feature:1570491-1570838:1:exon
so has part: feature:1571190-1571345:1:exon
so has part: feature:1572330-1572509:1:exon
so has part: feature:1573191-1573301:1:exon
so has part: feature:1574370-1574570:1:exon
so has part: feature:1575141-1575284:1:exon
so has part: feature:1576375-1576545:1:exon
so has part: feature:1576727-1576867:1:exon
so has part: feature:1577668-1577836:1:exon
so has part: feature:1578305-1578417:1:exon
so has part: feature:1578873-1582121:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1543434-1549397:1:exon

position:1549397:1
position: 1549397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1551723-1551912:1:exon

position:1551723:1
position: 1551723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1551912:1
position: 1551912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1553921-1554085:1:exon

position:1553921:1
position: 1553921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1554085:1
position: 1554085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1555484-1555543:1:exon

position:1555484:1
position: 1555484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555543:1
position: 1555543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1557991-1558110:1:exon

position:1557991:1
position: 1557991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1558110:1
position: 1558110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1559050-1559257:1:exon

position:1559050:1
position: 1559050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559257:1
position: 1559257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1559607-1559848:1:exon

position:1559607:1
position: 1559607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1559848:1
position: 1559848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1560800-1561003:1:exon

position:1560800:1
position: 1560800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561003:1
position: 1561003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1562926-1562998:1:exon

position:1562926:1
position: 1562926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1562998:1
position: 1562998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1563440-1563557:1:exon

position:1563440:1
position: 1563440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563557:1
position: 1563557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1564423-1564552:1:exon

position:1564423:1
position: 1564423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1564552:1
position: 1564552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1566659-1566886:1:exon

position:1566659:1
position: 1566659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1566886:1
position: 1566886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1570491-1570838:1:exon

position:1570491:1
position: 1570491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1570838:1
position: 1570838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1571190-1571345:1:exon

position:1571190:1
position: 1571190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1571345:1
position: 1571345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1572330-1572509:1:exon

position:1572330:1
position: 1572330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1572509:1
position: 1572509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1573191-1573301:1:exon

position:1573191:1
position: 1573191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573301:1
position: 1573301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1574370-1574570:1:exon

position:1574370:1
position: 1574370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574570:1
position: 1574570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1575141-1575284:1:exon

position:1575141:1
position: 1575141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575284:1
position: 1575284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1576375-1576545:1:exon

position:1576375:1
position: 1576375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1576545:1
position: 1576545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1576727-1576867:1:exon

position:1576727:1
position: 1576727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1576867:1
position: 1576867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1577668-1577836:1:exon

position:1577668:1
position: 1577668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577836:1
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position:1578873:1
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PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PRDM10
product: PR/SET domain 10, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_010723602.3
SIO_010081: PRDM10
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location: region:1543434-1582121:1
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PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PRDM10
product: PR/SET domain 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_010723600.3
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
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location: region:1543434-1582121:1
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PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PRDM10
product: PR/SET domain 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_010723601.3
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(1543434..1546764,1549167..1549397,1551723..1551912,1553921..1554085,1555484..1555543,1557991..1558110,1559050..1559257,1559607..1559848,1560800..1561003,1562926..1562998,1563440..1563557,1564423..1564552,1566659..1566886,1570491..1570838,1571190..1571345,1572330..1572509,1573191..1573301,1574370..1574570,1575141..1575284,1576375..1576545,1576727..1576867,1577668..1577836,1578305..1578417,1578873..1582121)
location: region:1543434-1582121:1
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urn:…
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PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PRDM10
product: PR/SET domain 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019622963.2
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
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location: region:1543434-1582121:1
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PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PRDM10
product: PR/SET domain 10, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 135 samples with support for all annotated introns
transcript id: XM_010723603.3
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
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location: region:1543436-1582121:1
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position:1543436:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
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urn:…
SIO_000300: 8
SIO_000628: feature:1562926-1562998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1563440-1563557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1564423-1564552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1566659-1566886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570491-1570838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1571190-1571345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1572330-1572509:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1573191-1573301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1574370-1574570:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1575141-1575284:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576375-1576545:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576727-1576867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577668-1577836:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1578305-1578417:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1578873-1582121:1:exon

PRDM10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PRDM10
product: PR/SET domain 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 180 samples with support for all annotated introns
transcript id: XM_019622962.2
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(1549675..1551912,1553921..1554085,1555484..1555543,1557991..1558110,1559050..1559257,1559607..1559848,1560800..1561003,1562926..1562998,1563440..1563557,1564423..1564552,1566659..1566886,1570491..1570838,1571190..1571345,1572330..1572509,1573191..1573301,1574370..1574570,1575141..1575284,1576375..1576545,1576727..1576867,1577668..1577836,1578305..1578417,1578873..1582121)
location: region:1549675-1582121:1
so has part: feature:1549675-1551912:1:exon
so has part: feature:1553921-1554085:1:exon
so has part: feature:1555484-1555543:1:exon
so has part: feature:1557991-1558110:1:exon
so has part: feature:1559050-1559257:1:exon
so has part: feature:1559607-1559848:1:exon
so has part: feature:1560800-1561003:1:exon
so has part: feature:1562926-1562998:1:exon
so has part: feature:1563440-1563557:1:exon
so has part: feature:1564423-1564552:1:exon
so has part: feature:1566659-1566886:1:exon
so has part: feature:1570491-1570838:1:exon
so has part: feature:1571190-1571345:1:exon
so has part: feature:1572330-1572509:1:exon
so has part: feature:1573191-1573301:1:exon
so has part: feature:1574370-1574570:1:exon
so has part: feature:1575141-1575284:1:exon
so has part: feature:1576375-1576545:1:exon
so has part: feature:1576727-1576867:1:exon
so has part: feature:1577668-1577836:1:exon
so has part: feature:1578305-1578417:1:exon
so has part: feature:1578873-1582121:1:exon

position:1549675:1
position: 1549675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1549675-1551912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553921-1554085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1555484-1555543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1557991-1558110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1559050-1559257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1559607-1559848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1560800-1561003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1562926-1562998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1563440-1563557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1564423-1564552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1566659-1566886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570491-1570838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1571190-1571345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1572330-1572509:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1573191-1573301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1574370-1574570:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1575141-1575284:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576375-1576545:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576727-1576867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577668-1577836:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1578305-1578417:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1578873-1582121:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MDSKEESPQVWPDSAEQDQNAAQVHFVPEAGTVAQIVYSEEQERPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGSVAESPQQMALEQGQQADRASLPVHNQVLPPMEAVDGSDPLAPLQNQMERMETKEEDDEDEEDDEDGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTKARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQTELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFMRMEVTIENGEKCEEGTQDLLHFSSKGQFDEARQATLNGLEQQEQTPVPSETQSTLEQQSENHPLQIQPQHDESAVPTQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGSLESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHIIDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYTQHAIQVQHIQVAEPSPTAQSSSQVGGQPLSPSSQQSQQELSPSQMQTAASTQNQALQQQQGSSVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPDLDVKQNSSLSSEVQVGVSQPPTHTDTLESQTSNQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(1551844..1551912,1553921..1554085,1555484..1555543,1557991..1558110,1559050..1559257,1559607..1559848,1560800..1561003,1562926..1562998,1563440..1563557,1564423..1564552,1566659..1566886,1570491..1570838,1571190..1571345,1572330..1572509,1573191..1573301,1574370..1574570,1575141..1575284,1576375..1576545,1576727..1576867,1577668..1577836,1578305..1578417,1578873..1579109)
location: region:1551844-1579109:1
so has part: feature:1551844-1551912:1:exon
so has part: feature:1553921-1554085:1:exon
so has part: feature:1555484-1555543:1:exon
so has part: feature:1557991-1558110:1:exon
so has part: feature:1559050-1559257:1:exon
so has part: feature:1559607-1559848:1:exon
so has part: feature:1560800-1561003:1:exon
so has part: feature:1562926-1562998:1:exon
so has part: feature:1563440-1563557:1:exon
so has part: feature:1564423-1564552:1:exon
so has part: feature:1566659-1566886:1:exon
so has part: feature:1570491-1570838:1:exon
so has part: feature:1571190-1571345:1:exon
so has part: feature:1572330-1572509:1:exon
so has part: feature:1573191-1573301:1:exon
so has part: feature:1574370-1574570:1:exon
so has part: feature:1575141-1575284:1:exon
so has part: feature:1576375-1576545:1:exon
so has part: feature:1576727-1576867:1:exon
so has part: feature:1577668-1577836:1:exon
so has part: feature:1578305-1578417:1:exon
so has part: feature:1578873-1579109:1:exon

XP_019478507.1
type: Protein
SIO_000068: ncbiprotein

position:1551844:1
position: 1551844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579109:1
position: 1579109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1551844-1551912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553921-1554085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1555484-1555543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1557991-1558110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1559050-1559257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1559607-1559848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1560800-1561003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1562926-1562998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1563440-1563557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1564423-1564552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1566659-1566886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570491-1570838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1571190-1571345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1572330-1572509:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1573191-1573301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1574370-1574570:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1575141-1575284:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576375-1576545:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576727-1576867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577668-1577836:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1578305-1578417:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1578873-1579109:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MDSKEESPQVWPDSAEQDQNAAQVHFVPEAGTVAQIVYSEEQERPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGSVAESPQQMALEQGQQADRASLPVHNQVLPPMEAVDGSDPLAPLQNQMERMETKEEDDEDEEDDEDGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTKARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQTELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFMRMEVTIENGEKCEEGTQDLLHFSSKGQFDEARQATLNGLEQQEQTPVPSETQSTLEQQSENHPLQIQPQHDESAVPTQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGSLESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHIIDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYTQHAIQVQHIQVAEPSPTAQSSSQVGGQPLSPSSQQSQQELSPSQMQTAASTQNQALQQQQGSSVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPDLDVKQNSSLSSEVQVGVSQPPTHTDTLESQTSNQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(1551844..1551912,1553921..1554085,1555484..1555543,1557991..1558110,1559050..1559257,1559607..1559848,1560800..1561003,1562926..1562998,1563440..1563557,1564423..1564552,1566659..1566886,1570491..1570838,1571190..1571345,1572330..1572509,1573191..1573301,1574370..1574570,1575141..1575284,1576375..1576545,1576727..1576867,1577668..1577836,1578305..1578417,1578873..1579109)
location: region:1551844-1579109:1
so has part: feature:1551844-1551912:1:exon
so has part: feature:1553921-1554085:1:exon
so has part: feature:1555484-1555543:1:exon
so has part: feature:1557991-1558110:1:exon
so has part: feature:1559050-1559257:1:exon
so has part: feature:1559607-1559848:1:exon
so has part: feature:1560800-1561003:1:exon
so has part: feature:1562926-1562998:1:exon
so has part: feature:1563440-1563557:1:exon
so has part: feature:1564423-1564552:1:exon
so has part: feature:1566659-1566886:1:exon
so has part: feature:1570491-1570838:1:exon
so has part: feature:1571190-1571345:1:exon
so has part: feature:1572330-1572509:1:exon
so has part: feature:1573191-1573301:1:exon
so has part: feature:1574370-1574570:1:exon
so has part: feature:1575141-1575284:1:exon
so has part: feature:1576375-1576545:1:exon
so has part: feature:1576727-1576867:1:exon
so has part: feature:1577668-1577836:1:exon
so has part: feature:1578305-1578417:1:exon
so has part: feature:1578873-1579109:1:exon

XP_019478508.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1551844-1551912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553921-1554085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1555484-1555543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1557991-1558110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1559050-1559257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1559607-1559848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1560800-1561003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1562926-1562998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1563440-1563557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1564423-1564552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1566659-1566886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570491-1570838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1571190-1571345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1572330-1572509:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1573191-1573301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1574370-1574570:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1575141-1575284:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576375-1576545:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576727-1576867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577668-1577836:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1578305-1578417:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1578873-1579109:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MDSKEESPQVWPDSAEQDQNAAQVHFVPEAGTVAQIVYSEEQERPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGSVAESPQQMALEQGQQADRASLPVHNQVLPPMEAVDGSDPLAPLQNQMERMETKEEDDEDEEDDEDGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTKARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQTELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFMRMEVTIENGEKCEEGTQDLLHFSSKGQFDEARQATLNGLEQQEQTPVPSETQSTLEQQSENHPLQIQPQHDESAVPTQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGSLESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHIIDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYTQHAIQVQHIQVAEPSPTAQSSSQVGGQPLSPSSQQSQQELSPSQMQTAASTQNQALQQQQGSSVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPDLDVKQNSSLSSEVQVGVSQPPTHTDTLESQTSNQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(1551844..1551912,1553921..1554085,1555484..1555543,1557991..1558110,1559050..1559257,1559607..1559848,1560800..1561003,1562926..1562998,1563440..1563557,1564423..1564552,1566659..1566886,1570491..1570838,1571190..1571345,1572330..1572509,1573191..1573301,1574370..1574570,1575141..1575284,1576375..1576545,1576727..1576867,1577668..1577836,1578305..1578417,1578873..1579109)
location: region:1551844-1579109:1
so has part: feature:1551844-1551912:1:exon
so has part: feature:1553921-1554085:1:exon
so has part: feature:1555484-1555543:1:exon
so has part: feature:1557991-1558110:1:exon
so has part: feature:1559050-1559257:1:exon
so has part: feature:1559607-1559848:1:exon
so has part: feature:1560800-1561003:1:exon
so has part: feature:1562926-1562998:1:exon
so has part: feature:1563440-1563557:1:exon
so has part: feature:1564423-1564552:1:exon
so has part: feature:1566659-1566886:1:exon
so has part: feature:1570491-1570838:1:exon
so has part: feature:1571190-1571345:1:exon
so has part: feature:1572330-1572509:1:exon
so has part: feature:1573191-1573301:1:exon
so has part: feature:1574370-1574570:1:exon
so has part: feature:1575141-1575284:1:exon
so has part: feature:1576375-1576545:1:exon
so has part: feature:1576727-1576867:1:exon
so has part: feature:1577668-1577836:1:exon
so has part: feature:1578305-1578417:1:exon
so has part: feature:1578873-1579109:1:exon

XP_031412721.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1551844-1551912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553921-1554085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1555484-1555543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1557991-1558110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1559050-1559257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1559607-1559848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1560800-1561003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1562926-1562998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1563440-1563557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1564423-1564552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1566659-1566886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570491-1570838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1571190-1571345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1572330-1572509:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1573191-1573301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1574370-1574570:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1575141-1575284:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576375-1576545:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576727-1576867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577668-1577836:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1578305-1578417:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1578873-1579109:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MDSKEESPQVWPDSAEQDQNAAQVHFVPEAGTVAQIVYSEEQERPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGSVAESPQQMALEQGQQADRASLPVHNQVLPPMEAVDGSDPLAPLQNQMERMETKEEDDEDEEDDEDGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTKARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQTELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFMRMEVTIENGEKCEEGTQDLLHFSSKGQFDEARQATLNGLEQQEQTPVPSETQSTLEQQSENHPLQIQPQHDESAVPTQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGSLESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHIIDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYTQHAIQVQHIQVAEPSPTAQSSSQVGGQPLSPSSQQSQQELSPSQMQTAASTQNQALQQQQGSSVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPDLDVKQNSSLSSEVQVGVSQPPTHTDTLESQTSNQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(1551844..1551912,1553921..1554085,1555484..1555543,1557991..1558110,1559050..1559257,1559607..1559848,1560800..1561003,1562926..1562998,1563440..1563557,1564423..1564552,1566659..1566886,1570491..1570838,1571190..1571345,1572330..1572509,1573191..1573301,1574370..1574570,1575141..1575284,1576375..1576545,1576727..1576867,1577668..1577836,1578305..1578417,1578873..1579109)
location: region:1551844-1579109:1
so has part: feature:1551844-1551912:1:exon
so has part: feature:1553921-1554085:1:exon
so has part: feature:1555484-1555543:1:exon
so has part: feature:1557991-1558110:1:exon
so has part: feature:1559050-1559257:1:exon
so has part: feature:1559607-1559848:1:exon
so has part: feature:1560800-1561003:1:exon
so has part: feature:1562926-1562998:1:exon
so has part: feature:1563440-1563557:1:exon
so has part: feature:1564423-1564552:1:exon
so has part: feature:1566659-1566886:1:exon
so has part: feature:1570491-1570838:1:exon
so has part: feature:1571190-1571345:1:exon
so has part: feature:1572330-1572509:1:exon
so has part: feature:1573191-1573301:1:exon
so has part: feature:1574370-1574570:1:exon
so has part: feature:1575141-1575284:1:exon
so has part: feature:1576375-1576545:1:exon
so has part: feature:1576727-1576867:1:exon
so has part: feature:1577668-1577836:1:exon
so has part: feature:1578305-1578417:1:exon
so has part: feature:1578873-1579109:1:exon

XP_010721902.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1551844-1551912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553921-1554085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1555484-1555543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1557991-1558110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1559050-1559257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1559607-1559848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1560800-1561003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1562926-1562998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1563440-1563557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1564423-1564552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1566659-1566886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570491-1570838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1571190-1571345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1572330-1572509:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1573191-1573301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1574370-1574570:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1575141-1575284:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576375-1576545:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576727-1576867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577668-1577836:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1578305-1578417:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1578873-1579109:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X1
translation: MDSKEESPQVWPDSAEQDQNAAQVHFVPEAGTVAQIVYSEEQERPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGSVAESPQQMALEQGQQADRASLPVHNQVLPPMEAVDGSDPLAPLQNQMERMETKEEDDEDEEDDEDGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTKARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQTELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFMRMEVTIENGEKCEEGTQDLLHFSSKGQFDEARQATLNGLEQQEQTPVPSETQSTLEQQSENHPLQIQPQHDESAVPTQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGSLESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHIIDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYTQHAIQVQHIQVAEPSPTAQSSSQVGGQPLSPSSQQSQQELSPSQMQTAASTQNQALQQQQGSSVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPDLDVKQNSSLSSEVQVGVSQPPTHTDTLESQTSNQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(1551844..1551912,1553921..1554085,1555484..1555543,1557991..1558110,1559050..1559257,1559607..1559848,1560800..1561003,1562926..1562998,1563440..1563557,1564423..1564552,1566659..1566886,1570491..1570838,1571190..1571345,1572330..1572509,1573191..1573301,1574370..1574570,1575141..1575284,1576375..1576545,1576727..1576867,1577668..1577836,1578305..1578417,1578873..1579109)
location: region:1551844-1579109:1
so has part: feature:1551844-1551912:1:exon
so has part: feature:1553921-1554085:1:exon
so has part: feature:1555484-1555543:1:exon
so has part: feature:1557991-1558110:1:exon
so has part: feature:1559050-1559257:1:exon
so has part: feature:1559607-1559848:1:exon
so has part: feature:1560800-1561003:1:exon
so has part: feature:1562926-1562998:1:exon
so has part: feature:1563440-1563557:1:exon
so has part: feature:1564423-1564552:1:exon
so has part: feature:1566659-1566886:1:exon
so has part: feature:1570491-1570838:1:exon
so has part: feature:1571190-1571345:1:exon
so has part: feature:1572330-1572509:1:exon
so has part: feature:1573191-1573301:1:exon
so has part: feature:1574370-1574570:1:exon
so has part: feature:1575141-1575284:1:exon
so has part: feature:1576375-1576545:1:exon
so has part: feature:1576727-1576867:1:exon
so has part: feature:1577668-1577836:1:exon
so has part: feature:1578305-1578417:1:exon
so has part: feature:1578873-1579109:1:exon

XP_010721903.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1551844-1551912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553921-1554085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1555484-1555543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1557991-1558110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1559050-1559257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1559607-1559848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1560800-1561003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1562926-1562998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1563440-1563557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1564423-1564552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1566659-1566886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570491-1570838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1571190-1571345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1572330-1572509:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1573191-1573301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1574370-1574570:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1575141-1575284:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576375-1576545:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576727-1576867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577668-1577836:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1578305-1578417:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1578873-1579109:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X3
translation: MDSKEESPQVWPDSAEQDQNAAQVHFVPEAGTVAQIVYSEEQERPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQASLPVHNQVLPPMEAVDGSDPLAPLQNQMERMETKEEDDEDEEDDEDGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTKARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQTELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFMRMEVTIENGEKCEEGTQDLLHFSSKGQFDEARQATLNGLEQQEQTPVPSETQSTLEQQSENHPLQIQPQHDESAVPTQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGSLESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHIIDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYTQHAIQVQHIQVAEPSPTAQSSSQVGGQPLSPSSQQSQQELSPSQMQTAASTQNQALQQQQGSSVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPDLDVKQNSSLSSEVQVGVSQPPTHTDTLESQTSNQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(1551844..1551912,1553921..1554085,1555484..1555543,1559050..1559257,1559607..1559848,1560800..1561003,1562926..1562998,1563440..1563557,1564423..1564552,1566659..1566886,1570491..1570838,1571190..1571345,1572330..1572509,1573191..1573301,1574370..1574570,1575141..1575284,1576375..1576545,1576727..1576867,1577668..1577836,1578305..1578417,1578873..1579109)
location: region:1551844-1579109:1
so has part: feature:1551844-1551912:1:exon
so has part: feature:1553921-1554085:1:exon
so has part: feature:1555484-1555543:1:exon
so has part: feature:1559050-1559257:1:exon
so has part: feature:1559607-1559848:1:exon
so has part: feature:1560800-1561003:1:exon
so has part: feature:1562926-1562998:1:exon
so has part: feature:1563440-1563557:1:exon
so has part: feature:1564423-1564552:1:exon
so has part: feature:1566659-1566886:1:exon
so has part: feature:1570491-1570838:1:exon
so has part: feature:1571190-1571345:1:exon
so has part: feature:1572330-1572509:1:exon
so has part: feature:1573191-1573301:1:exon
so has part: feature:1574370-1574570:1:exon
so has part: feature:1575141-1575284:1:exon
so has part: feature:1576375-1576545:1:exon
so has part: feature:1576727-1576867:1:exon
so has part: feature:1577668-1577836:1:exon
so has part: feature:1578305-1578417:1:exon
so has part: feature:1578873-1579109:1:exon

XP_010721905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1551844-1551912:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553921-1554085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1555484-1555543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1559050-1559257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1559607-1559848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1560800-1561003:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1562926-1562998:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1563440-1563557:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1564423-1564552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1566659-1566886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1570491-1570838:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1571190-1571345:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1572330-1572509:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1573191-1573301:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1574370-1574570:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1575141-1575284:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1576375-1576545:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576727-1576867:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1577668-1577836:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1578305-1578417:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1578873-1579109:1:exon

PRDM10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PRDM10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PR domain zinc finger protein 10 isoform X2
translation: MDSKEESPQVHFVPEAGTVAQIVYSEEQERPSQQVVYTADGTSYTSVDTSEHTLVYIHPVEATQTLFTDPSQVAYVQQDATTQQVTVLLPAAAQSMNPTNLSVLGSVAESPQQMALEQGQQADRASLPVHNQVLPPMEAVDGSDPLAPLQNQMERMETKEEDDEDEEDDEDGEDTDMDEWDPDPPRPFDPNDLWCEECNNAHPSVCPKHGPLHPIPNRPVLTKARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRQTELKDCYIHLKVSLDKGDRKDRDLQEDLWFELSSEALCNWMMFVRPAQNHLEQNLVAYQYGHHIYYTTIKNVEPKQELKVWYAASYAEFVNQKIHDISEEERKVLREQEKNWPCYECNRRFMSSEQLQQHLNSHDEKLDFFSRARGRGRGRGKRRFGPGRRPGRPPKFMRMEVTIENGEKCEEGTQDLLHFSSKGQFDEARQATLNGLEQQEQTPVPSETQSTLEQQSENHPLQIQPQHDESAVPTQSTMTADDMRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDICNKGFINSGSLESHMKFHMDQKTYSCIFCPESFDRLDLLKDHVAIHIIDGYFTCPTCKKRFPDFIQVKKHVRSFHSEKIYQCTECDKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRIASTDYESFMFKCRLCMMGFRRRGMLVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEFAQLPNTIHAPLATAVISSTPAVLTTDSTTGETVVTTDLLTQAMTELSQTLTTDYRTPQGDYQRIQYIPVSQSTTGLQQPQHIQLQVVQVAQATSPHQSQHSTVDVGQLHDPQTYTQHAIQVQHIQVAEPSPTAQSSSQVGGQPLSPSSQQSQQELSPSQMQTAASTQNQALQQQQGSSVQHTYLPSTWNSFRSYSSEIQMMTIPQGQYVITETAVGTPVTTVNTGQVKAVTQTHYVISEGQPDLDVKQNSSLSSEVQVGVSQPPTHTDTLESQTSNQQQTTQYIITTTTNGNGGSEVHITKPRTFSAEHE
SIO_010081: PRDM10
subclass of: SO_0000673
so part of: PRDM10
location: join(1551844..1551870,1553921..1554085,1555484..1555543,1557991..1558110,1559050..1559257,1559607..1559848,1560800..1561003,1562926..1562998,1563440..1563557,1564423..1564552,1566659..1566886,1570491..1570838,1571190..1571345,1572330..1572509,1573191..1573301,1574370..1574570,1575141..1575284,1576375..1576545,1576727..1576867,1577668..1577836,1578305..1578417,1578873..1579109)
location: region:1551844-1579109:1
so has part: feature:1551844-1551870:1:exon
so has part: feature:1553921-1554085:1:exon
so has part: feature:1555484-1555543:1:exon
so has part: feature:1557991-1558110:1:exon
so has part: feature:1559050-1559257:1:exon
so has part: feature:1559607-1559848:1:exon
so has part: feature:1560800-1561003:1:exon
so has part: feature:1562926-1562998:1:exon
so has part: feature:1563440-1563557:1:exon
so has part: feature:1564423-1564552:1:exon
so has part: feature:1566659-1566886:1:exon
so has part: feature:1570491-1570838:1:exon
so has part: feature:1571190-1571345:1:exon
so has part: feature:1572330-1572509:1:exon
so has part: feature:1573191-1573301:1:exon
so has part: feature:1574370-1574570:1:exon
so has part: feature:1575141-1575284:1:exon
so has part: feature:1576375-1576545:1:exon
so has part: feature:1576727-1576867:1:exon
so has part: feature:1577668-1577836:1:exon
so has part: feature:1578305-1578417:1:exon
so has part: feature:1578873-1579109:1:exon

XP_010721904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1551844-1551870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1553921-1554085:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1555484-1555543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1557991-1558110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1559050-1559257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1559607-1559848:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1560800-1561003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1562926-1562998:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1563440-1563557:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1564423-1564552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1566659-1566886:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1570491-1570838:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1571190-1571345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1572330-1572509:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1573191-1573301:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1574370-1574570:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1575141-1575284:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576375-1576545:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576727-1576867:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1577668-1577836:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1578305-1578417:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1578873-1579109:1:exon

NFRKB
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NFRKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1583188..1600403
location: region:1583188-1600403:1
so has part: feature:1583188-1600403:1:exon
subclass of: SO_0000010

100545394
type: Gene
SIO_000068: ncbigene

position:1583188:1
position: 1583188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1600403:1
position: 1600403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1583188-1600403:1:exon

NFRKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NFRKB
product: nuclear factor related to kappaB binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_003212663.4
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(1583188..1583833,1584076..1584277,1584364..1584491,1585406..1585580,1585787..1585888,1586480..1586553,1586892..1586976,1587441..1587621,1587770..1587878,1588353..1588479,1589291..1589356,1590361..1590440,1590524..1590567,1590985..1591045,1591635..1591809,1592399..1592505,1592805..1592928,1593403..1593482,1594185..1594405,1594507..1594795,1595080..1595298,1595780..1596565,1597290..1597396,1598173..1598308,1599036..1600403)
location: region:1583188-1600403:1
so has part: feature:1583188-1583833:1:exon
so has part: feature:1584076-1584277:1:exon
so has part: feature:1584364-1584491:1:exon
so has part: feature:1585406-1585580:1:exon
so has part: feature:1585787-1585888:1:exon
so has part: feature:1586480-1586553:1:exon
so has part: feature:1586892-1586976:1:exon
so has part: feature:1587441-1587621:1:exon
so has part: feature:1587770-1587878:1:exon
so has part: feature:1588353-1588479:1:exon
so has part: feature:1589291-1589356:1:exon
so has part: feature:1590361-1590440:1:exon
so has part: feature:1590524-1590567:1:exon
so has part: feature:1590985-1591045:1:exon
so has part: feature:1591635-1591809:1:exon
so has part: feature:1592399-1592505:1:exon
so has part: feature:1592805-1592928:1:exon
so has part: feature:1593403-1593482:1:exon
so has part: feature:1594185-1594405:1:exon
so has part: feature:1594507-1594795:1:exon
so has part: feature:1595080-1595298:1:exon
so has part: feature:1595780-1596565:1:exon
so has part: feature:1597290-1597396:1:exon
so has part: feature:1598173-1598308:1:exon
so has part: feature:1599036-1600403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1583188-1583833:1:exon

position:1583833:1
position: 1583833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1584076-1584277:1:exon

position:1584076:1
position: 1584076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584277:1
position: 1584277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1584364-1584491:1:exon

position:1584364:1
position: 1584364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584491:1
position: 1584491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1585406-1585580:1:exon

position:1585406:1
position: 1585406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585580:1
position: 1585580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1585787-1585888:1:exon

position:1585787:1
position: 1585787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1585888:1
position: 1585888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1586480-1586553:1:exon

position:1586480:1
position: 1586480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586553:1
position: 1586553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1586892-1586976:1:exon

position:1586892:1
position: 1586892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586976:1
position: 1586976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1587441-1587621:1:exon

position:1587441:1
position: 1587441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587621:1
position: 1587621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1587770-1587878:1:exon

position:1587770:1
position: 1587770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587878:1
position: 1587878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1588353-1588479:1:exon

position:1588353:1
position: 1588353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588479:1
position: 1588479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1589291-1589356:1:exon

position:1589291:1
position: 1589291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1589356:1
position: 1589356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1590361-1590440:1:exon

position:1590361:1
position: 1590361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590440:1
position: 1590440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1590524-1590567:1:exon

position:1590524:1
position: 1590524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590567:1
position: 1590567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1590985-1591045:1:exon

position:1590985:1
position: 1590985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591045:1
position: 1591045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1591635-1591809:1:exon

position:1591635:1
position: 1591635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1591809:1
position: 1591809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1592399-1592505:1:exon

position:1592399:1
position: 1592399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592505:1
position: 1592505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1592805-1592928:1:exon

position:1592805:1
position: 1592805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1592928:1
position: 1592928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1593403-1593482:1:exon

position:1593403:1
position: 1593403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593482:1
position: 1593482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1594185-1594405:1:exon

position:1594185:1
position: 1594185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594405:1
position: 1594405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1594507-1594795:1:exon

position:1594507:1
position: 1594507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594795:1
position: 1594795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1595080-1595298:1:exon

position:1595080:1
position: 1595080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595298:1
position: 1595298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1595780-1596565:1:exon

position:1595780:1
position: 1595780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596565:1
position: 1596565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1597290-1597396:1:exon

position:1597290:1
position: 1597290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1597396:1
position: 1597396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1598173-1598308:1:exon

position:1598173:1
position: 1598173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598308:1
position: 1598308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1599036-1600403:1:exon

position:1599036:1
position: 1599036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFRKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NFRKB
product: nuclear factor related to kappaB binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 168 samples with support for all annotated introns
transcript id: XM_010723606.3
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(1583188..1583833,1584076..1584277,1584364..1584491,1585406..1585580,1585787..1585888,1586480..1586553,1586892..1586976,1587441..1587621,1587770..1587878,1588353..1588479,1589291..1589356,1590361..1590440,1590524..1590567,1590985..1591045,1591635..1591809,1592399..1592505,1592805..1592928,1593403..1593482,1594185..1594405,1594507..1594795,1595780..1596565,1597290..1597396,1598173..1598308,1599036..1600403)
location: region:1583188-1600403:1
so has part: feature:1583188-1583833:1:exon
so has part: feature:1584076-1584277:1:exon
so has part: feature:1584364-1584491:1:exon
so has part: feature:1585406-1585580:1:exon
so has part: feature:1585787-1585888:1:exon
so has part: feature:1586480-1586553:1:exon
so has part: feature:1586892-1586976:1:exon
so has part: feature:1587441-1587621:1:exon
so has part: feature:1587770-1587878:1:exon
so has part: feature:1588353-1588479:1:exon
so has part: feature:1589291-1589356:1:exon
so has part: feature:1590361-1590440:1:exon
so has part: feature:1590524-1590567:1:exon
so has part: feature:1590985-1591045:1:exon
so has part: feature:1591635-1591809:1:exon
so has part: feature:1592399-1592505:1:exon
so has part: feature:1592805-1592928:1:exon
so has part: feature:1593403-1593482:1:exon
so has part: feature:1594185-1594405:1:exon
so has part: feature:1594507-1594795:1:exon
so has part: feature:1595780-1596565:1:exon
so has part: feature:1597290-1597396:1:exon
so has part: feature:1598173-1598308:1:exon
so has part: feature:1599036-1600403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1583188-1583833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1584076-1584277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584364-1584491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585406-1585580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585787-1585888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586480-1586553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586892-1586976:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587441-1587621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1587770-1587878:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588353-1588479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589291-1589356:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1590361-1590440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1590524-1590567:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1590985-1591045:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1591635-1591809:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1592399-1592505:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1592805-1592928:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1593403-1593482:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1594185-1594405:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1594507-1594795:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1595780-1596565:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1597290-1597396:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1598173-1598308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1599036-1600403:1:exon

NFRKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NFRKB
product: nuclear factor related to kappaB binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 185 samples with support for all annotated introns
transcript id: XM_010723605.3
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(1583188..1583833,1584076..1584277,1584364..1584491,1585406..1585580,1585787..1585888,1586480..1586553,1586892..1586976,1587441..1587621,1587770..1587878,1588353..1588479,1589291..1589356,1590361..1590440,1590524..1590567,1590988..1591045,1591635..1591809,1592399..1592505,1592805..1592928,1593403..1593482,1594185..1594405,1594507..1594795,1595080..1595298,1595780..1596565,1597290..1597396,1598173..1598308,1599036..1600403)
location: region:1583188-1600403:1
so has part: feature:1583188-1583833:1:exon
so has part: feature:1584076-1584277:1:exon
so has part: feature:1584364-1584491:1:exon
so has part: feature:1585406-1585580:1:exon
so has part: feature:1585787-1585888:1:exon
so has part: feature:1586480-1586553:1:exon
so has part: feature:1586892-1586976:1:exon
so has part: feature:1587441-1587621:1:exon
so has part: feature:1587770-1587878:1:exon
so has part: feature:1588353-1588479:1:exon
so has part: feature:1589291-1589356:1:exon
so has part: feature:1590361-1590440:1:exon
so has part: feature:1590524-1590567:1:exon
so has part: feature:1590988-1591045:1:exon
so has part: feature:1591635-1591809:1:exon
so has part: feature:1592399-1592505:1:exon
so has part: feature:1592805-1592928:1:exon
so has part: feature:1593403-1593482:1:exon
so has part: feature:1594185-1594405:1:exon
so has part: feature:1594507-1594795:1:exon
so has part: feature:1595080-1595298:1:exon
so has part: feature:1595780-1596565:1:exon
so has part: feature:1597290-1597396:1:exon
so has part: feature:1598173-1598308:1:exon
so has part: feature:1599036-1600403:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1583188-1583833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1584076-1584277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584364-1584491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585406-1585580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585787-1585888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586480-1586553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586892-1586976:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587441-1587621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1587770-1587878:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588353-1588479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589291-1589356:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1590361-1590440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1590524-1590567:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1590988-1591045:1:exon

position:1590988:1
position: 1590988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1591635-1591809:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1592399-1592505:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1592805-1592928:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1593403-1593482:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1594185-1594405:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1594507-1594795:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1595080-1595298:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1595780-1596565:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1597290-1597396:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1598173-1598308:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1599036-1600403:1:exon

NFRKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NFRKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor related to kappa-B-binding protein isoform X1
translation: MDSLDHMLTDPLELGPCGDGNGARIMEDCLLGTTRVSLPEDLLEDPEIFFEVVSLSTWQEVLTDAQQEHLKTFLPHFPENNREHQNKIISALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCLKSQYKRYLSSQQQYFYRLLKQILASRNHLLELARKGGPDMILKRKHFSPSYDAEEREKRTHRRYLKILREVKEECGDTTLSSDEEDLSSWPPSSPSRCPSPPVPLRVIPTLSTMDMKTADRIELGESDLKMMLRKHREKRKYQPDHPDLVTADITLEDIMTRVNAGRKGSLAALFDLATFKKKVKEKDDKKKKKLKVIKSEVEDLADSFGGAHGIPSLSQDHSPIPLSSVKEEPLEEMKPCLGINEISSSFFFLLLEILFLEGPASLSVLEDKVIDWQTSPASALNTWFSFAPNWSELVLPALQYLTGDSRDVPSSFSPFVEFKEKTQQWKLLGSCQDHEKELAALFQLWLETKDQTFFKENEDSSDATTPIPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKAKKALQQKPKPPAKVKSSNKESSVKALPSSTSEPSQLSLSDSSMPPTPVTPVTPTAPALPATPISPPPVSVVSKSVPNAGSEPAKPSQSVLLVSSPTMPQLGTLLSTAQSSQTQSGQQPPPTRVVSHTASSVLPQVRVVSAQSSLPAVSQQAPVVTQQQQQQQQPTSVPQIRVPATATQTKVLPQAVMTLPVKAQTSPVQVQRQGTSVTGQTGITVTGLSAAPSPAVKAVTSSPGSSATSTSSTTVIQNVAGQNIIKQVAITGQLGMKTQPGSSIPLTATNFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAAGSSASGKGISATLHVTSNPVQTADSPAKTSTASSSSSSPAGSTMVKVTPDLKTAEPTSSAFRLMPALGMTVADQKSKAITTVASTEAKPAATIRIVQGLGVMPPKAGQTITVATHAKQVPSSAAVSVPGTVHTSAVSLPTMSATVSKAVAVASGAAGTPITIGTGGTAVRQVPVSTTVVSTTQAGKLPARITVPLSVISQPVKGKSVVTAPIIKGNLGANISGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTVSGSTKAVSTVVVTTAPSPKQSQDQL
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(1583699..1583833,1584076..1584277,1584364..1584491,1585406..1585580,1585787..1585888,1586480..1586553,1586892..1586976,1587441..1587621,1587770..1587878,1588353..1588479,1589291..1589356,1590361..1590440,1590524..1590567,1590985..1591045,1591635..1591809,1592399..1592505,1592805..1592928,1593403..1593482,1594185..1594405,1594507..1594795,1595080..1595298,1595780..1596565,1597290..1597396,1598173..1598308,1599036..1599161)
location: region:1583699-1599161:1
so has part: feature:1583699-1583833:1:exon
so has part: feature:1584076-1584277:1:exon
so has part: feature:1584364-1584491:1:exon
so has part: feature:1585406-1585580:1:exon
so has part: feature:1585787-1585888:1:exon
so has part: feature:1586480-1586553:1:exon
so has part: feature:1586892-1586976:1:exon
so has part: feature:1587441-1587621:1:exon
so has part: feature:1587770-1587878:1:exon
so has part: feature:1588353-1588479:1:exon
so has part: feature:1589291-1589356:1:exon
so has part: feature:1590361-1590440:1:exon
so has part: feature:1590524-1590567:1:exon
so has part: feature:1590985-1591045:1:exon
so has part: feature:1591635-1591809:1:exon
so has part: feature:1592399-1592505:1:exon
so has part: feature:1592805-1592928:1:exon
so has part: feature:1593403-1593482:1:exon
so has part: feature:1594185-1594405:1:exon
so has part: feature:1594507-1594795:1:exon
so has part: feature:1595080-1595298:1:exon
so has part: feature:1595780-1596565:1:exon
so has part: feature:1597290-1597396:1:exon
so has part: feature:1598173-1598308:1:exon
so has part: feature:1599036-1599161:1:exon

XP_003212711.1
type: Protein
SIO_000068: ncbiprotein

position:1583699:1
position: 1583699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599161:1
position: 1599161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1583699-1583833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1584076-1584277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584364-1584491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585406-1585580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585787-1585888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586480-1586553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586892-1586976:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587441-1587621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1587770-1587878:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588353-1588479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589291-1589356:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1590361-1590440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1590524-1590567:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1590985-1591045:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1591635-1591809:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1592399-1592505:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1592805-1592928:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1593403-1593482:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1594185-1594405:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1594507-1594795:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1595080-1595298:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1595780-1596565:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1597290-1597396:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1598173-1598308:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1599036-1599161:1:exon

NFRKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NFRKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor related to kappa-B-binding protein isoform X3
translation: MDSLDHMLTDPLELGPCGDGNGARIMEDCLLGTTRVSLPEDLLEDPEIFFEVVSLSTWQEVLTDAQQEHLKTFLPHFPENNREHQNKIISALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCLKSQYKRYLSSQQQYFYRLLKQILASRNHLLELARKGGPDMILKRKHFSPSYDAEEREKRTHRRYLKILREVKEECGDTTLSSDEEDLSSWPPSSPSRCPSPPVPLRVIPTLSTMDMKTADRIELGESDLKMMLRKHREKRKYQPDHPDLVTADITLEDIMTRVNAGRKGSLAALFDLATFKKKVKEKDDKKKKKLKVIKSEVEDLADSFGGAHGIPSLSQDHSPIPLSSVKEEPLEEMKPCLGINEISSSFFFLLLEILFLEGPASLSVLEDKVIDWQTSPASALNTWFSFAPNWSELVLPALQYLTGDSRDVPSSFSPFVEFKEKTQQWKLLGSCQDHEKELAALFQLWLETKDQTFFKENEDSSDATTPIPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKAKKALQQKPKPPAKVKSSNKESSVKALPSSTSEPSQLSLSDSSMPPTPVTPVTPTAPALPATPISPPPVSVVSKSVPNAGSEPAKPSQSVLLVSSPTMPQLGTLLSTAQSSQTQSGQQPPPTRVVSHTASSVLPQVRVVSAQSSLPAVSQQAPVVTQQQQQQQQPTSVPQIRVPATATQTKVLPQVAITGQLGMKTQPGSSIPLTATNFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAAGSSASGKGISATLHVTSNPVQTADSPAKTSTASSSSSSPAGSTMVKVTPDLKTAEPTSSAFRLMPALGMTVADQKSKAITTVASTEAKPAATIRIVQGLGVMPPKAGQTITVATHAKQVPSSAAVSVPGTVHTSAVSLPTMSATVSKAVAVASGAAGTPITIGTGGTAVRQVPVSTTVVSTTQAGKLPARITVPLSVISQPVKGKSVVTAPIIKGNLGANISGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTVSGSTKAVSTVVVTTAPSPKQSQDQL
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(1583699..1583833,1584076..1584277,1584364..1584491,1585406..1585580,1585787..1585888,1586480..1586553,1586892..1586976,1587441..1587621,1587770..1587878,1588353..1588479,1589291..1589356,1590361..1590440,1590524..1590567,1590985..1591045,1591635..1591809,1592399..1592505,1592805..1592928,1593403..1593482,1594185..1594405,1594507..1594795,1595780..1596565,1597290..1597396,1598173..1598308,1599036..1599161)
location: region:1583699-1599161:1
so has part: feature:1583699-1583833:1:exon
so has part: feature:1584076-1584277:1:exon
so has part: feature:1584364-1584491:1:exon
so has part: feature:1585406-1585580:1:exon
so has part: feature:1585787-1585888:1:exon
so has part: feature:1586480-1586553:1:exon
so has part: feature:1586892-1586976:1:exon
so has part: feature:1587441-1587621:1:exon
so has part: feature:1587770-1587878:1:exon
so has part: feature:1588353-1588479:1:exon
so has part: feature:1589291-1589356:1:exon
so has part: feature:1590361-1590440:1:exon
so has part: feature:1590524-1590567:1:exon
so has part: feature:1590985-1591045:1:exon
so has part: feature:1591635-1591809:1:exon
so has part: feature:1592399-1592505:1:exon
so has part: feature:1592805-1592928:1:exon
so has part: feature:1593403-1593482:1:exon
so has part: feature:1594185-1594405:1:exon
so has part: feature:1594507-1594795:1:exon
so has part: feature:1595780-1596565:1:exon
so has part: feature:1597290-1597396:1:exon
so has part: feature:1598173-1598308:1:exon
so has part: feature:1599036-1599161:1:exon

XP_010721908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583699-1583833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1584076-1584277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584364-1584491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585406-1585580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585787-1585888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586480-1586553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586892-1586976:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587441-1587621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1587770-1587878:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588353-1588479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589291-1589356:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1590361-1590440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1590524-1590567:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1590985-1591045:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1591635-1591809:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1592399-1592505:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1592805-1592928:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1593403-1593482:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1594185-1594405:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1594507-1594795:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1595780-1596565:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1597290-1597396:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1598173-1598308:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1599036-1599161:1:exon

NFRKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NFRKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear factor related to kappa-B-binding protein isoform X2
translation: MDSLDHMLTDPLELGPCGDGNGARIMEDCLLGTTRVSLPEDLLEDPEIFFEVVSLSTWQEVLTDAQQEHLKTFLPHFPENNREHQNKIISALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYRQLCLKSQYKRYLSSQQQYFYRLLKQILASRNHLLELARKGGPDMILKRKHFSPSYDAEEREKRTHRRYLKILREVKEECGDTTLSSDEEDLSSWPPSSPSRCPSPPVPLRVIPTLSTMDMKTADRIELGESDLKMMLRKHREKRKYQPDHPDLVTADITLEDIMTRVNAGRKGSLAALFDLATFKKKVKEKDDKKKKKLKVIKSEVEDLADSFGGAHGIPSLSQDHSPIPLSSVKEEPLEEMKPCLGINEISSSFFFLLLEILFLEGPASLSVLEDKVIDWQTSPASALNTWFSFAPNWSELVLPALQYLTGDSRDVPSSFSPFVEFKEKTQQWKLLGSCQDHEKELAALFQLWLETKDQTFFKENEDSSDATTPIPRVTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMHGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHQAQAAAAKAKKALQQKPKPPAKVKSSNKESSVKALPSSTSEPSQLSLSDSSMPPTPVTPVTPTAPALPATPISPPPVSVVSKSVPNAGSEPAKPSQSVLLVSSPTMPQLGTLLSTAQSSQTQSGQQPPPTRVVSHTASSVLPQVRVVSAQSSLPAVSQQAPVVTQQQQQQQQPTSVPQIRVPATATQTKVLPQAVMTLPVKAQTSPVQVQRQGTSVTGQTGITVTGLSAAPSPAVKAVTSSPGSSATSTSSTTVIQNVAGQNIIKQVAITGQLGMKTQPGSSIPLTATNFRIQGKDVLRLPPSSITTDAKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAAGSSASGKGISATLHVTSNPVQTADSPAKTSTASSSSSSPAGSTMVKVTPDLKTAEPTSSAFRLMPALGMTVADQKSKAITTVASTEAKPAATIRIVQGLGVMPPKAGQTITVATHAKQVPSSAAVSVPGTVHTSAVSLPTMSATVSKAVAVASGAAGTPITIGTGGTAVRQVPVSTTVVSTTQAGKLPARITVPLSVISQPVKGKSVVTAPIIKGNLGANISGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVRIQTVPASHLQQGTVSGSTKAVSTVVVTTAPSPKQSQDQL
SIO_010081: NFRKB
subclass of: SO_0000673
so part of: NFRKB
location: join(1583699..1583833,1584076..1584277,1584364..1584491,1585406..1585580,1585787..1585888,1586480..1586553,1586892..1586976,1587441..1587621,1587770..1587878,1588353..1588479,1589291..1589356,1590361..1590440,1590524..1590567,1590988..1591045,1591635..1591809,1592399..1592505,1592805..1592928,1593403..1593482,1594185..1594405,1594507..1594795,1595080..1595298,1595780..1596565,1597290..1597396,1598173..1598308,1599036..1599161)
location: region:1583699-1599161:1
so has part: feature:1583699-1583833:1:exon
so has part: feature:1584076-1584277:1:exon
so has part: feature:1584364-1584491:1:exon
so has part: feature:1585406-1585580:1:exon
so has part: feature:1585787-1585888:1:exon
so has part: feature:1586480-1586553:1:exon
so has part: feature:1586892-1586976:1:exon
so has part: feature:1587441-1587621:1:exon
so has part: feature:1587770-1587878:1:exon
so has part: feature:1588353-1588479:1:exon
so has part: feature:1589291-1589356:1:exon
so has part: feature:1590361-1590440:1:exon
so has part: feature:1590524-1590567:1:exon
so has part: feature:1590988-1591045:1:exon
so has part: feature:1591635-1591809:1:exon
so has part: feature:1592399-1592505:1:exon
so has part: feature:1592805-1592928:1:exon
so has part: feature:1593403-1593482:1:exon
so has part: feature:1594185-1594405:1:exon
so has part: feature:1594507-1594795:1:exon
so has part: feature:1595080-1595298:1:exon
so has part: feature:1595780-1596565:1:exon
so has part: feature:1597290-1597396:1:exon
so has part: feature:1598173-1598308:1:exon
so has part: feature:1599036-1599161:1:exon

XP_010721907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1583699-1583833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1584076-1584277:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1584364-1584491:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1585406-1585580:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1585787-1585888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1586480-1586553:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1586892-1586976:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1587441-1587621:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1587770-1587878:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588353-1588479:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1589291-1589356:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1590361-1590440:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1590524-1590567:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1590988-1591045:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1591635-1591809:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1592399-1592505:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1592805-1592928:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1593403-1593482:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1594185-1594405:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1594507-1594795:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1595080-1595298:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1595780-1596565:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1597290-1597396:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1598173-1598308:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1599036-1599161:1:exon

ST14
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ST14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1609390..1630358
location: region:1609390-1630358:1
so has part: feature:1609390-1630358:1:exon
subclass of: SO_0000010

100547194
type: Gene
SIO_000068: ncbigene

position:1609390:1
position: 1609390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630358:1
position: 1630358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609390-1630358:1:exon

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_031556862.1
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: join(1609390..1609587,1620709..1620868,1621109..1621236,1621762..1621832,1622301..1622461,1622691..1622726,1623060..1623297,1623528..1623667,1624100..1624197,1624756..1624865,1625821..1625951,1626232..1626336,1627084..1627191,1627382..1627495,1627689..1627817,1628173..1628359,1628765..1629039,1629287..1629423,1629905..1630358)
location: region:1609390-1630358:1
so has part: feature:1609390-1609587:1:exon
so has part: feature:1620709-1620868:1:exon
so has part: feature:1621109-1621236:1:exon
so has part: feature:1621762-1621832:1:exon
so has part: feature:1622301-1622461:1:exon
so has part: feature:1622691-1622726:1:exon
so has part: feature:1623060-1623297:1:exon
so has part: feature:1623528-1623667:1:exon
so has part: feature:1624100-1624197:1:exon
so has part: feature:1624756-1624865:1:exon
so has part: feature:1625821-1625951:1:exon
so has part: feature:1626232-1626336:1:exon
so has part: feature:1627084-1627191:1:exon
so has part: feature:1627382-1627495:1:exon
so has part: feature:1627689-1627817:1:exon
so has part: feature:1628173-1628359:1:exon
so has part: feature:1628765-1629039:1:exon
so has part: feature:1629287-1629423:1:exon
so has part: feature:1629905-1630358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1609390-1609587:1:exon

position:1609587:1
position: 1609587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1620709-1620868:1:exon

position:1620709:1
position: 1620709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620868:1
position: 1620868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1621109-1621236:1:exon

position:1621109:1
position: 1621109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621236:1
position: 1621236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1621762-1621832:1:exon

position:1621762:1
position: 1621762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1621832:1
position: 1621832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1622301-1622461:1:exon

position:1622301:1
position: 1622301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622461:1
position: 1622461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1622691-1622726:1:exon

position:1622691:1
position: 1622691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622726:1
position: 1622726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1623060-1623297:1:exon

position:1623060:1
position: 1623060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623297:1
position: 1623297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1623528-1623667:1:exon

position:1623528:1
position: 1623528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623667:1
position: 1623667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1624100-1624197:1:exon

position:1624100:1
position: 1624100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624197:1
position: 1624197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1624756-1624865:1:exon

position:1624756:1
position: 1624756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1624865:1
position: 1624865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1625821-1625951:1:exon

position:1625821:1
position: 1625821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625951:1
position: 1625951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1626232-1626336:1:exon

position:1626232:1
position: 1626232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626336:1
position: 1626336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1627084-1627191:1:exon

position:1627084:1
position: 1627084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627191:1
position: 1627191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1627382-1627495:1:exon

position:1627382:1
position: 1627382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627495:1
position: 1627495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1627689-1627817:1:exon

position:1627689:1
position: 1627689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627817:1
position: 1627817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1628173-1628359:1:exon

position:1628173:1
position: 1628173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1628359:1
position: 1628359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1628765-1629039:1:exon

position:1628765:1
position: 1628765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629039:1
position: 1629039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1629287-1629423:1:exon

position:1629287:1
position: 1629287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629423:1
position: 1629423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1629905-1630358:1:exon

position:1629905:1
position: 1629905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_019622964.1
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: join(1609734..1609926,1620709..1620868,1621109..1621236,1621762..1621832,1622301..1622461,1622691..1622726,1623060..1623297,1623528..1623667,1624100..1624197,1624756..1624865,1625821..1625951,1626232..1626336,1627084..1627191,1627382..1627495,1627689..1627817,1628173..1628359,1628765..1629039,1629287..1629423,1629905..1630358)
location: region:1609734-1630358:1
so has part: feature:1609734-1609926:1:exon
so has part: feature:1620709-1620868:1:exon
so has part: feature:1621109-1621236:1:exon
so has part: feature:1621762-1621832:1:exon
so has part: feature:1622301-1622461:1:exon
so has part: feature:1622691-1622726:1:exon
so has part: feature:1623060-1623297:1:exon
so has part: feature:1623528-1623667:1:exon
so has part: feature:1624100-1624197:1:exon
so has part: feature:1624756-1624865:1:exon
so has part: feature:1625821-1625951:1:exon
so has part: feature:1626232-1626336:1:exon
so has part: feature:1627084-1627191:1:exon
so has part: feature:1627382-1627495:1:exon
so has part: feature:1627689-1627817:1:exon
so has part: feature:1628173-1628359:1:exon
so has part: feature:1628765-1629039:1:exon
so has part: feature:1629287-1629423:1:exon
so has part: feature:1629905-1630358:1:exon

position:1609734:1
position: 1609734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609734-1609926:1:exon

position:1609926:1
position: 1609926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1620709-1620868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1621109-1621236:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621762-1621832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1622301-1622461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1622691-1622726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1623060-1623297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1623528-1623667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1624100-1624197:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1624756-1624865:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1625821-1625951:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1626232-1626336:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1627084-1627191:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1627382-1627495:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1627689-1627817:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1628173-1628359:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1628765-1629039:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1629287-1629423:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1629905-1630358:1:exon

ST14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ST14
product: suppression of tumorigenicity 14, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 159 samples with support for all annotated introns
transcript id: XM_010723607.2
SIO_010081: ST14
subclass of: SO_0000673
so part of: ST14
location: join(1613070..1613161,1620709..1620868,1621109..1621236,1621762..1621832,1622301..1622461,1622691..1622726,1623060..1623297,1623528..1623667,1624100..1624197,1624756..1624865,1625821..1625951,1626232..1626336,1627084..1627191,1627382..1627495,1627689..1627817,1628173..1628359,1628765..1629039,1629287..1629423,1629905..1630358)
location: region:1613070-1630358:1
so has part: feature:1613070-1613161:1:exon
so has part: feature:1620709-1620868:1:exon
so has part: feature:1621109-1621236:1:exon
so has part: feature:1621762-1621832:1:exon
so has part: feature:1622301-1622461:1:exon
so has part: feature:1622691-1622726:1:exon
so has part: feature:1623060-1623297:1:exon
so has part: feature:1623528-1623667:1:exon
so has part: feature:1624100-1624197:1:exon
so has part: feature:1624756-1624865:1:exon
so has part: feature:1625821-1625951:1:exon
so has part: feature:1626232-1626336:1:exon
so has part: feature:1627084-1627191:1:exon
so has part: feature:1627382-1627495:1:exon
so has part: feature:1627689-1627817:1:exon
so has part: feature:1628173-1628359:1:exon
so has part: feature:1628765-1629039:1:exon
so has part: feature:1629287-1629423:1:exon
so has part: feature:1629905-1630358:1:exon

position:1613070:1
position: 1613070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1613070-1613161:1:exon

position:1613161:1
position: 1613161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1620709-1620868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1621109-1621236:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621762-1621832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1622301-1622461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1622691-1622726:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1623060-1623297:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1623528-1623667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1624100-1624197:1:exon