Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 23, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 23, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015033.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015033.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000984.2.\nOn Dec 18, 2014 this sequence version replaced NC_015033.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6679660
topology: linear
so has quality: SO_0000987
location: 1..6679660
location: region:1-6679660:1
RO_0002162: 9103

NC_015033
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6679660:1
position: 6679660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6679660:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 23
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

IGSF21
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: IGSF21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(17126..64399)
location: region:17126-64399:-1
so has part: feature:17126-64399:-1:exon
subclass of: SO_0000010

100543694
type: Gene
SIO_000068: ncbigene

position:17126:-1
position: 17126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64399:-1
position: 64399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17126-64399:-1:exon

IGSF21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: IGSF21
product: immunoglobin superfamily member 21, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_031556616.1
SIO_010081: IGSF21
subclass of: SO_0000673
so part of: IGSF21
location: complement(join(17126..19869,30793..30965,32087..32125,32208..32400,32558..32643,33749..34190,34800..34915,35357..35475,39286..39407,44982..45094,64119..64399))
location: region:17126-64399:-1
so has part: feature:64119-64399:-1:exon
so has part: feature:44982-45094:-1:exon
so has part: feature:39286-39407:-1:exon
so has part: feature:35357-35475:-1:exon
so has part: feature:34800-34915:-1:exon
so has part: feature:33749-34190:-1:exon
so has part: feature:32558-32643:-1:exon
so has part: feature:32208-32400:-1:exon
so has part: feature:32087-32125:-1:exon
so has part: feature:30793-30965:-1:exon
so has part: feature:17126-19869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64119-64399:-1:exon

position:64119:-1
position: 64119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:44982-45094:-1:exon

position:44982:-1
position: 44982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:45094:-1
position: 45094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39286-39407:-1:exon

position:39286:-1
position: 39286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39407:-1
position: 39407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:35357-35475:-1:exon

position:35357:-1
position: 35357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:35475:-1
position: 35475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:34800-34915:-1:exon

position:34800:-1
position: 34800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34915:-1
position: 34915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:33749-34190:-1:exon

position:33749:-1
position: 33749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34190:-1
position: 34190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:32558-32643:-1:exon

position:32558:-1
position: 32558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32643:-1
position: 32643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:32208-32400:-1:exon

position:32208:-1
position: 32208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32400:-1
position: 32400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:32087-32125:-1:exon

position:32087:-1
position: 32087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32125:-1
position: 32125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:30793-30965:-1:exon

position:30793:-1
position: 30793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30965:-1
position: 30965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17126-19869:-1:exon

position:19869:-1
position: 19869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGSF21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: IGSF21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin superfamily member 21 isoform X1
translation: MRTMSPLPLFLLLLWDLLDLALAYLTVSIEPLPPVVVGDAVTLKCNFKTDGKMREIVWYRVTDGGTIKQKIFTFDAMFSTNFSHMENYRKREDLVYQSTVRLPEVRISDNGPYECHVGIYDRATREKVVLASSNIFLNVMAPPTSISVIAADTPAPFSRYQAQNFTLVCVVSGGKPAPLVYFKRDGEPIEATPLPEPPAATRNWAPRNLLHRDLDDTKVPQSLAEGEMGGGPPNTAEPPRGLTAERGPTAEAIPETVVSREFPRWVHVAEPIYYFRHTHVPISDGTVEARATLTWTLNPQIDNEALFSCEVKHPALSMPMQSEVTLVAPKGPKIIMTPVRARVGDTVRILVQGFQNEVFPEPLFTWTRVGSRLLDGSAEHAGKELVLERVPAELNGSMYRCTAQNPLGSTDTHTRLIVFENPNIPRGTEDSNAMQGQVCSRGPGWMGIRRISSSAFILKQKEPSIRIPAGKKGCQLLNPQRYKPAALCSKHWTRASASSCQGLCPTTTRAARRIHPAVC
SIO_010081: IGSF21
subclass of: SO_0000673
so part of: IGSF21
location: complement(join(19780..19869,30793..30965,32087..32125,32208..32400,32558..32643,33749..34190,34800..34915,35357..35475,39286..39407,44982..45094,64119..64185))
location: region:19780-64185:-1
so has part: feature:64119-64185:-1:exon
so has part: feature:44982-45094:-1:exon
so has part: feature:39286-39407:-1:exon
so has part: feature:35357-35475:-1:exon
so has part: feature:34800-34915:-1:exon
so has part: feature:33749-34190:-1:exon
so has part: feature:32558-32643:-1:exon
so has part: feature:32208-32400:-1:exon
so has part: feature:32087-32125:-1:exon
so has part: feature:30793-30965:-1:exon
so has part: feature:19780-19869:-1:exon

XP_031412476.1
type: Protein
SIO_000068: ncbiprotein

position:19780:-1
position: 19780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64185:-1
position: 64185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64119-64185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44982-45094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39286-39407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35357-35475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34800-34915:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33749-34190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32558-32643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32208-32400:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32087-32125:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:30793-30965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:19780-19869:-1:exon

KLHDC7A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KLHDC7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22067..28127)
location: region:22067-28127:-1
so has part: feature:22067-28127:-1:exon
subclass of: SO_0000010

100545293
type: Gene
SIO_000068: ncbigene

position:22067:-1
position: 22067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28127:-1
position: 28127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22067-28127:-1:exon

KLHDC7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KLHDC7A
product: kelch domain containing 7A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019622408.2
SIO_010081: KLHDC7A
subclass of: SO_0000673
so part of: KLHDC7A
location: complement(22067..28127)
location: region:22067-28127:-1
so has part: feature:22067-28127:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22067-28127:-1:exon

KLHDC7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KLHDC7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch domain-containing protein 7A
translation: MSSHAKLLCAQSHLAQNSWPVPLGAQQSLIGFFTFSSAWHRKMNQWVTVLWQSDMQLTGKLVLSAASLLLLTLAYRFYKSRSAPGGNNPTSDACKEKGRRENAVPDGQNVEGLRHRWVFGARSGGDAQASVPDPWRKRENILPASEEEDGGEAESHDIRDLNEMLNGNEGGGNGHSVLVPHIVLPNQVAGDGGAQSTEQDLARGITSQEGGSGTIQTLSVTSELGVKITASHREADTSYSFSSIAKIQVEESYIAEKTKDGDGRLSPGLKGKVYDYYVQSISHSVSTKKSLPSASVGTALSSSSECVREELQCLEWVSTEQQRLERVSEELQRSEGVNKKLQSFATPLAETHSQETTVALQDSTISLTVPSNAESLEKDPKPPAPTRSISRKNSVLQIAENSHLQMPMDGFCVTPASVPPASPQPDLVGKANFFQTSPSSLDTHLDLGNCFDVLCRAKAEKLGFLQEAAYKVMSDNYLQVLKTPSIYCRLNASERDLILRRRMKGKMCVVVADISTHELGLYASRLCSYDDKGDRWHHLCHMPPEVVSQGCAMCSMFNYLFVVAGCEGLGRTPSNRVFCYNPLTNIWREICPLNQARPHCKLVALDGCLYAIGGECLYTVERYDPRYDRWVFVAPLPHDTFAVAHTATVCDGEIYVTGGTLRYVLLRYIAREDIWTVSPAGGGKDRTVEMVSVNGFIYRFDLNCNMGIGVYRCRAKAKLWYECATHAKAYPACFQCAVVGSLVHCIGRHFHIRFLADPISPRFGIKELQPFPSPRGSLIPVVLVLPWAGMEQTQV
SIO_010081: KLHDC7A
subclass of: SO_0000673
so part of: KLHDC7A
location: complement(25601..27988)
location: region:25601-27988:-1
so has part: feature:25601-27988:-1:exon

XP_019477953.1
type: Protein
SIO_000068: ncbiprotein

position:25601:-1
position: 25601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27988:-1
position: 27988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25601-27988:-1:exon

IGSF21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: IGSF21
product: immunoglobin superfamily member 21, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_031556618.1
SIO_010081: IGSF21
subclass of: SO_0000673
so part of: IGSF21
location: complement(join(30613..30965,32087..32125,32208..32400,32558..32643,33749..34190,34800..34915,35357..35475,39286..39407,64119..64200))
location: region:30613-64200:-1
so has part: feature:64119-64200:-1:exon
so has part: feature:39286-39407:-1:exon
so has part: feature:35357-35475:-1:exon
so has part: feature:34800-34915:-1:exon
so has part: feature:33749-34190:-1:exon
so has part: feature:32558-32643:-1:exon
so has part: feature:32208-32400:-1:exon
so has part: feature:32087-32125:-1:exon
so has part: feature:30613-30965:-1:exon

position:30613:-1
position: 30613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64200:-1
position: 64200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64119-64200:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39286-39407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35357-35475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:34800-34915:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:33749-34190:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32558-32643:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32208-32400:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32087-32125:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:30613-30965:-1:exon

IGSF21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: IGSF21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin superfamily member 21 isoform X3
translation: MFSTNFSHMENYRKREDLVYQSTVRLPEVRISDNGPYECHVGIYDRATREKVVLASSNIFLNVMAPPTSISVIAADTPAPFSRYQAQNFTLVCVVSGGKPAPLVYFKRDGEPIEATPLPEPPAATRNWAPRNLLHRDLDDTKVPQSLAEGEMGGGPPNTAEPPRGLTAERGPTAEAIPETVVSREFPRWVHVAEPIYYFRHTHVPISDGTVEARATLTWTLNPQIDNEALFSCEVKHPALSMPMQSEVTLVAPKGPKIIMTPVRARVGDTVRILVQGFQNEVFPEPLFTWTRVGSRLLDGSAEHAGKELVLERVPAELNGSMYRCTAQNPLGSTDTHTRLIVFENPNIPRGTEDSNAMQGQVCSRGPGWMGIRRISSSAFILKQKEPSIRIPAGKKGCQLLNPQRYKPAALCSKVGYKHFLYLFKMRTFLFREIHAIWITRLL
SIO_010081: IGSF21
subclass of: SO_0000673
so part of: IGSF21
location: complement(join(30703..30965,32087..32125,32208..32400,32558..32643,33749..34190,34800..34915,35357..35475,39286..39359))
location: region:30703-39359:-1
so has part: feature:39286-39359:-1:exon
so has part: feature:35357-35475:-1:exon
so has part: feature:34800-34915:-1:exon
so has part: feature:33749-34190:-1:exon
so has part: feature:32558-32643:-1:exon
so has part: feature:32208-32400:-1:exon
so has part: feature:32087-32125:-1:exon
so has part: feature:30703-30965:-1:exon

XP_031412478.1
type: Protein
SIO_000068: ncbiprotein

position:30703:-1
position: 30703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39359:-1
position: 39359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39286-39359:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35357-35475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:34800-34915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:33749-34190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:32558-32643:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:32208-32400:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32087-32125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:30703-30965:-1:exon

IGSF21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: IGSF21
product: immunoglobin superfamily member 21, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_031556617.1
SIO_010081: IGSF21
subclass of: SO_0000673
so part of: IGSF21
location: complement(join(31618..31869,32087..32125,32208..32400,32558..32643,33749..34190,34800..34915,35357..35475,39286..39407,44982..45094,64119..64397))
location: region:31618-64397:-1
so has part: feature:64119-64397:-1:exon
so has part: feature:44982-45094:-1:exon
so has part: feature:39286-39407:-1:exon
so has part: feature:35357-35475:-1:exon
so has part: feature:34800-34915:-1:exon
so has part: feature:33749-34190:-1:exon
so has part: feature:32558-32643:-1:exon
so has part: feature:32208-32400:-1:exon
so has part: feature:32087-32125:-1:exon
so has part: feature:31618-31869:-1:exon

position:31618:-1
position: 31618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64397:-1
position: 64397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64119-64397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44982-45094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39286-39407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35357-35475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34800-34915:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33749-34190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32558-32643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32208-32400:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32087-32125:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:31618-31869:-1:exon

position:31869:-1
position: 31869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IGSF21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: IGSF21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: immunoglobulin superfamily member 21 isoform X2
translation: MRTMSPLPLFLLLLWDLLDLALAYLTVSIEPLPPVVVGDAVTLKCNFKTDGKMREIVWYRVTDGGTIKQKIFTFDAMFSTNFSHMENYRKREDLVYQSTVRLPEVRISDNGPYECHVGIYDRATREKVVLASSNIFLNVMAPPTSISVIAADTPAPFSRYQAQNFTLVCVVSGGKPAPLVYFKRDGEPIEATPLPEPPAATRNWAPRNLLHRDLDDTKVPQSLAEGEMGGGPPNTAEPPRGLTAERGPTAEAIPETVVSREFPRWVHVAEPIYYFRHTHVPISDGTVEARATLTWTLNPQIDNEALFSCEVKHPALSMPMQSEVTLVAPKGPKIIMTPVRARVGDTVRILVQGFQNEVFPEPLFTWTRVGSRLLDGSAEHAGKELVLERVPAELNGSMYRCTAQNPLGSTDTHTRLIVFENPNIPRGTEDSNGSITSHRNFRLVLALTLTVILELT
SIO_010081: IGSF21
subclass of: SO_0000673
so part of: IGSF21
location: complement(join(31796..31869,32087..32125,32208..32400,32558..32643,33749..34190,34800..34915,35357..35475,39286..39407,44982..45094,64119..64185))
location: region:31796-64185:-1
so has part: feature:64119-64185:-1:exon
so has part: feature:44982-45094:-1:exon
so has part: feature:39286-39407:-1:exon
so has part: feature:35357-35475:-1:exon
so has part: feature:34800-34915:-1:exon
so has part: feature:33749-34190:-1:exon
so has part: feature:32558-32643:-1:exon
so has part: feature:32208-32400:-1:exon
so has part: feature:32087-32125:-1:exon
so has part: feature:31796-31869:-1:exon

XP_031412477.1
type: Protein
SIO_000068: ncbiprotein

position:31796:-1
position: 31796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64119-64185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:44982-45094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39286-39407:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:35357-35475:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:34800-34915:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:33749-34190:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:32558-32643:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:32208-32400:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:32087-32125:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:31796-31869:-1:exon

ARHGEF10L
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ARHGEF10L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(117564..138840)
location: region:117564-138840:-1
so has part: feature:117564-138840:-1:exon
subclass of: SO_0000010

100545450
type: Gene
SIO_000068: ncbigene

position:117564:-1
position: 117564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138840:-1
position: 138840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117564-138840:-1:exon

ARHGEF10L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARHGEF10L
product: Rho guanine nucleotide exchange factor 10 like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031556619.1
SIO_010081: ARHGEF10L
subclass of: SO_0000673
so part of: ARHGEF10L
location: complement(join(117564..118667,118740..118862,120074..120248,121953..122098,123480..123634,123798..124027,124108..124194,124409..124530,125322..125422,125528..125655,126005..126120,126216..126400,127264..127409,128074..128247,128428..128520,128611..128727,128877..129056,129135..129212,129356..129462,130942..131050,131800..131915,132303..132448,132639..132722,132878..132966,133786..133813,133909..134173,138553..138840))
location: region:117564-138840:-1
so has part: feature:138553-138840:-1:exon
so has part: feature:133909-134173:-1:exon
so has part: feature:133786-133813:-1:exon
so has part: feature:132878-132966:-1:exon
so has part: feature:132639-132722:-1:exon
so has part: feature:132303-132448:-1:exon
so has part: feature:131800-131915:-1:exon
so has part: feature:130942-131050:-1:exon
so has part: feature:129356-129462:-1:exon
so has part: feature:129135-129212:-1:exon
so has part: feature:128877-129056:-1:exon
so has part: feature:128611-128727:-1:exon
so has part: feature:128428-128520:-1:exon
so has part: feature:128074-128247:-1:exon
so has part: feature:127264-127409:-1:exon
so has part: feature:126216-126400:-1:exon
so has part: feature:126005-126120:-1:exon
so has part: feature:125528-125655:-1:exon
so has part: feature:125322-125422:-1:exon
so has part: feature:124409-124530:-1:exon
so has part: feature:124108-124194:-1:exon
so has part: feature:123798-124027:-1:exon
so has part: feature:123480-123634:-1:exon
so has part: feature:121953-122098:-1:exon
so has part: feature:120074-120248:-1:exon
so has part: feature:118740-118862:-1:exon
so has part: feature:117564-118667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:138553-138840:-1:exon

position:138553:-1
position: 138553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133909-134173:-1:exon

position:133909:-1
position: 133909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134173:-1
position: 134173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:133786-133813:-1:exon

position:133786:-1
position: 133786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133813:-1
position: 133813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:132878-132966:-1:exon

position:132878:-1
position: 132878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132966:-1
position: 132966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:132639-132722:-1:exon

position:132639:-1
position: 132639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132722:-1
position: 132722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:132303-132448:-1:exon

position:132303:-1
position: 132303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132448:-1
position: 132448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:131800-131915:-1:exon

position:131800:-1
position: 131800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131915:-1
position: 131915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:130942-131050:-1:exon

position:130942:-1
position: 130942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131050:-1
position: 131050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:129356-129462:-1:exon

position:129356:-1
position: 129356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129462:-1
position: 129462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:129135-129212:-1:exon

position:129135:-1
position: 129135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129212:-1
position: 129212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:128877-129056:-1:exon

position:128877:-1
position: 128877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129056:-1
position: 129056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:128611-128727:-1:exon

position:128611:-1
position: 128611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128727:-1
position: 128727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:128428-128520:-1:exon

position:128428:-1
position: 128428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128520:-1
position: 128520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:128074-128247:-1:exon

position:128074:-1
position: 128074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:128247:-1
position: 128247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:127264-127409:-1:exon

position:127264:-1
position: 127264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127409:-1
position: 127409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:126216-126400:-1:exon

position:126216:-1
position: 126216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126400:-1
position: 126400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:126005-126120:-1:exon

position:126005:-1
position: 126005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:126120:-1
position: 126120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:125528-125655:-1:exon

position:125528:-1
position: 125528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125655:-1
position: 125655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:125322-125422:-1:exon

position:125322:-1
position: 125322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:125422:-1
position: 125422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:124409-124530:-1:exon

position:124409:-1
position: 124409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124530:-1
position: 124530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:124108-124194:-1:exon

position:124108:-1
position: 124108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124194:-1
position: 124194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:123798-124027:-1:exon

position:123798:-1
position: 123798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:124027:-1
position: 124027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:123480-123634:-1:exon

position:123480:-1
position: 123480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123634:-1
position: 123634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:121953-122098:-1:exon

position:121953:-1
position: 121953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122098:-1
position: 122098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:120074-120248:-1:exon

position:120074:-1
position: 120074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120248:-1
position: 120248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:118740-118862:-1:exon

position:118740:-1
position: 118740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118862:-1
position: 118862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:117564-118667:-1:exon

position:118667:-1
position: 118667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF10L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARHGEF10L
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 10-like protein
translation: MVLFVWIAAVFWGPQSAANGFRERLREGPRWKVCTPCAMASSQLPPCPTVGTVLASQPPSELPPGEEDLGEAFDFEDSDEEEDEDSATEPSRGAVLQAPPRRHRATSSSTEGLVPETQEGLPEQVSNGEACEDPPDINTQTWKRKSGHQGDRFEFTAAEDDVIYDDVPCENLDANQDGRSLIYEDVQRGEELGWSSSEFESYSEESGEENKPEAEPAKHRASFQPKLSPDLNRLKETYARTKRDILALRVGGXDMQELKQKYDWKMTQLMKAAKSGTKDGLEKTKIAVMRKVTFLHRKEVPGDSEEEDTGFLEVTVSDAKHPPPELGPMPTGLSPQQVVRRHILGSIVQSERSYVESLKRILQDYRNPLMEMEPKVLSARKCQVVFFRLKEILQCHSMFQIALSSRVAEWDSAEKIGDLFVASFSKSMVLDVYSDYVNNFTTAMSLIKKACLTKPAFLDFLKKRQMASTDRVTLYGLMVKPIQRFPQFILLLQDMLKNTPKGHADRLSLQLALTELETLAEKLNEQKRVADQVAEIQQLSKSISDRSSLSKLLNSGQRQLLLCETLTETVYGDRGQLIKSKERKVFLLNDMLVCANINFKGQLEISSLVPLGPKYVVKWSTALPQVQVVEVGQESGAYDKDNVVIHNAGAKKHAPTGPASHNKVYLGPPRLFQELQDLQKDLAVVEQITLLISTLHGTYQNLNMTVAQDWCLALQRMMKVKEEEIHSANKCRLRLLLPGKPDKSGRPISVMVVFITPNPLSKISWVNCLHLAKIGLREENQPGWLCPDEDKKSKAPFWCPILSCHMPAFSSKALDLQLSAAVHNPVQSSLLGFSAVSTSLPQGYLWVGGGQEGAGGQVEIFSLNRSVPRTVKSFPVASPVLCMEYIPEAAEGDTEGTEEPRAGAEQPPATLHPTVCLGLRDGSIAVYSSVDTGTQCLLTCKSPGTQPVLCLKHSPEYLFAGLQDGTVAAYPRNNVGLWDLTEQPTRLPVGTSPVRALLMLDETLWASCANQVTVLDASTLCAQQTFEAHPDTEASVTHMIKAGSGVWMAFSSGSSIRLFHTETLEHLQEINIATRTTFVLPGQRHVRVTSLLICQGLLWVGTDQGIIVLLPVPRLEGIPKITGKGMVSLNGHGGPVDFLAVALSTLAPDVLKGDQEDEDGEEEKPLELDGPPPREIRKKGILLQYRLRSTSHLPGQLLSVRDAPVGTVTPEHTEEDGSIYEMADDPDVWVRSRPCARDAPRKEISSVAIISGGRGYRNFNSEPQRRGGDADSTLLIWQLR
SIO_010081: ARHGEF10L
subclass of: SO_0000673
so part of: ARHGEF10L
location: complement(join(118192..118667,118740..118862,120074..120248,121953..122098,123480..123634,123798..124027,124108..124194,124409..124530,125322..125422,125528..125655,126005..126120,126216..126400,127264..127409,128074..128247,128428..128520,128611..128727,128877..129056,129135..129212,129356..129462,130942..131050,131800..131915,132303..132448,132639..132722,132878..132966,133786..133813,133909..134173,138553..138618))
location: region:118192-138618:-1
so has part: feature:138553-138618:-1:exon
so has part: feature:133909-134173:-1:exon
so has part: feature:133786-133813:-1:exon
so has part: feature:132878-132966:-1:exon
so has part: feature:132639-132722:-1:exon
so has part: feature:132303-132448:-1:exon
so has part: feature:131800-131915:-1:exon
so has part: feature:130942-131050:-1:exon
so has part: feature:129356-129462:-1:exon
so has part: feature:129135-129212:-1:exon
so has part: feature:128877-129056:-1:exon
so has part: feature:128611-128727:-1:exon
so has part: feature:128428-128520:-1:exon
so has part: feature:128074-128247:-1:exon
so has part: feature:127264-127409:-1:exon
so has part: feature:126216-126400:-1:exon
so has part: feature:126005-126120:-1:exon
so has part: feature:125528-125655:-1:exon
so has part: feature:125322-125422:-1:exon
so has part: feature:124409-124530:-1:exon
so has part: feature:124108-124194:-1:exon
so has part: feature:123798-124027:-1:exon
so has part: feature:123480-123634:-1:exon
so has part: feature:121953-122098:-1:exon
so has part: feature:120074-120248:-1:exon
so has part: feature:118740-118862:-1:exon
so has part: feature:118192-118667:-1:exon

XP_031412479.1
type: Protein
SIO_000068: ncbiprotein

position:118192:-1
position: 118192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:138618:-1
position: 138618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:138553-138618:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133909-134173:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:133786-133813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132878-132966:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:132639-132722:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:132303-132448:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:131800-131915:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:130942-131050:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:129356-129462:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:129135-129212:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:128877-129056:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:128611-128727:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:128428-128520:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:128074-128247:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:127264-127409:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:126216-126400:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:126005-126120:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:125528-125655:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:125322-125422:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:124409-124530:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:124108-124194:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:123798-124027:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:123480-123634:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:121953-122098:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:120074-120248:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:118740-118862:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:118192-118667:-1:exon

LOC109370847
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141244..142326)
location: region:141244-142326:-1
so has part: feature:141244-142326:-1:exon
subclass of: SO_0000011

109370847
type: Gene
SIO_000068: ncbigene

position:141244:-1
position: 141244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142326:-1
position: 142326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141244-142326:-1:exon

LOC109370847
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370847
product: uncharacterized LOC109370847
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XR_002121299.1
SIO_010081: LOC109370847
subclass of: SO_0000673
so part of: LOC109370847
location: complement(join(141244..141438,141530..142326))
location: region:141244-142326:-1
so has part: feature:141530-142326:-1:exon
so has part: feature:141244-141438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141530-142326:-1:exon

position:141530:-1
position: 141530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141244-141438:-1:exon

position:141438:-1
position: 141438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RCC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <144444..151164
location: region:144444-151164:1
so has part: feature:144444-151164:1:exon
subclass of: SO_0000010

100545604
type: Gene
SIO_000068: ncbigene

position:144444:1
position: 144444
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:151164:1
position: 151164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144444-151164:1:exon

RCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RCC2
product: regulator of chromosome condensation 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_010722681.3
SIO_010081: RCC2
subclass of: SO_0000673
so part of: RCC2
location: join(<144444..144491,145983..146076,146183..146326,146406..146537,146620..146708,147103..147222,147473..147640,148065..148245,148328..148433,148534..148606,148726..148803,149573..151164)
location: region:144444-151164:1
so has part: feature:144444-144491:1:exon
so has part: feature:145983-146076:1:exon
so has part: feature:146183-146326:1:exon
so has part: feature:146406-146537:1:exon
so has part: feature:146620-146708:1:exon
so has part: feature:147103-147222:1:exon
so has part: feature:147473-147640:1:exon
so has part: feature:148065-148245:1:exon
so has part: feature:148328-148433:1:exon
so has part: feature:148534-148606:1:exon
so has part: feature:148726-148803:1:exon
so has part: feature:149573-151164:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144444-144491:1:exon

position:144491:1
position: 144491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:145983-146076:1:exon

position:145983:1
position: 145983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146076:1
position: 146076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146183-146326:1:exon

position:146183:1
position: 146183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146326:1
position: 146326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:146406-146537:1:exon

position:146406:1
position: 146406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146537:1
position: 146537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:146620-146708:1:exon

position:146620:1
position: 146620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146708:1
position: 146708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:147103-147222:1:exon

position:147103:1
position: 147103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147222:1
position: 147222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:147473-147640:1:exon

position:147473:1
position: 147473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147640:1
position: 147640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:148065-148245:1:exon

position:148065:1
position: 148065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148245:1
position: 148245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:148328-148433:1:exon

position:148328:1
position: 148328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148433:1
position: 148433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:148534-148606:1:exon

position:148534:1
position: 148534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148606:1
position: 148606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:148726-148803:1:exon

position:148726:1
position: 148726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148803:1
position: 148803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:149573-151164:1:exon

position:149573:1
position: 149573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RCC2
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:144447..144449,aa:OTHER)
product: LOW QUALITY PROTEIN: protein RCC2
translation: GXAVVICEPEHSKERIKLEGSKCRGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGIQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRNHTLALTESGSVYAFGENKMGQLGLGNQTDAVPSPTQIMYNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGMGDNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGAAQIYAGYTCSFAVSETGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYAHSLVIARDESDAEKEKLRKLPEYNPRTI
SIO_010081: RCC2
subclass of: SO_0000673
so part of: RCC2
location: join(<144444..144491,145983..146076,146183..146326,146406..146537,146620..146708,147103..147222,147473..147640,148065..148245,148328..148433,148534..148606,148726..148803,149573..149677)
location: region:144444-149677:1
so has part: feature:144444-144491:1:exon
so has part: feature:145983-146076:1:exon
so has part: feature:146183-146326:1:exon
so has part: feature:146406-146537:1:exon
so has part: feature:146620-146708:1:exon
so has part: feature:147103-147222:1:exon
so has part: feature:147473-147640:1:exon
so has part: feature:148065-148245:1:exon
so has part: feature:148328-148433:1:exon
so has part: feature:148534-148606:1:exon
so has part: feature:148726-148803:1:exon
so has part: feature:149573-149677:1:exon

XP_010720983.2
type: Protein
SIO_000068: ncbiprotein

position:149677:1
position: 149677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144444-144491:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:145983-146076:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:146183-146326:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:146406-146537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:146620-146708:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:147103-147222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:147473-147640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:148065-148245:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:148328-148433:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148534-148606:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148726-148803:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:149573-149677:1:exon

LOC100545908
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100545908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(152002..175808)
location: region:152002-175808:-1
so has part: feature:152002-175808:-1:exon
subclass of: SO_0000010

100545908
type: Gene
SIO_000068: ncbigene

position:152002:-1
position: 152002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175808:-1
position: 175808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152002-175808:-1:exon

LOC100545908
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545908
product: protein-arginine deiminase type-1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019622418.2
SIO_010081: LOC100545908
subclass of: SO_0000673
so part of: LOC100545908
location: complement(join(152002..152390,152488..152613,152830..153075,153371..153515,154290..154441,154523..154630,155110..155233,155486..155589,155697..155872,156427..156552,156900..157017,157690..157751,158973..159042,159500..159674,172424..172529))
location: region:152002-172529:-1
so has part: feature:172424-172529:-1:exon
so has part: feature:159500-159674:-1:exon
so has part: feature:158973-159042:-1:exon
so has part: feature:157690-157751:-1:exon
so has part: feature:156900-157017:-1:exon
so has part: feature:156427-156552:-1:exon
so has part: feature:155697-155872:-1:exon
so has part: feature:155486-155589:-1:exon
so has part: feature:155110-155233:-1:exon
so has part: feature:154523-154630:-1:exon
so has part: feature:154290-154441:-1:exon
so has part: feature:153371-153515:-1:exon
so has part: feature:152830-153075:-1:exon
so has part: feature:152488-152613:-1:exon
so has part: feature:152002-152390:-1:exon

position:172529:-1
position: 172529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172424-172529:-1:exon

position:172424:-1
position: 172424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159500-159674:-1:exon

position:159500:-1
position: 159500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159674:-1
position: 159674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:158973-159042:-1:exon

position:158973:-1
position: 158973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159042:-1
position: 159042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:157690-157751:-1:exon

position:157690:-1
position: 157690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157751:-1
position: 157751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:156900-157017:-1:exon

position:156900:-1
position: 156900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157017:-1
position: 157017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:156427-156552:-1:exon

position:156427:-1
position: 156427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156552:-1
position: 156552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:155697-155872:-1:exon

position:155697:-1
position: 155697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155872:-1
position: 155872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:155486-155589:-1:exon

position:155486:-1
position: 155486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155589:-1
position: 155589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:155110-155233:-1:exon

position:155110:-1
position: 155110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155233:-1
position: 155233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:154523-154630:-1:exon

position:154523:-1
position: 154523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154630:-1
position: 154630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:154290-154441:-1:exon

position:154290:-1
position: 154290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154441:-1
position: 154441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:153371-153515:-1:exon

position:153371:-1
position: 153371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153515:-1
position: 153515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:152830-153075:-1:exon

position:152830:-1
position: 152830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153075:-1
position: 153075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:152488-152613:-1:exon

position:152488:-1
position: 152488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152613:-1
position: 152613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:152002-152390:-1:exon

position:152390:-1
position: 152390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100545908
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545908
product: protein-arginine deiminase type-1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019622417.2
SIO_010081: LOC100545908
subclass of: SO_0000673
so part of: LOC100545908
location: complement(join(152010..152390,152488..152613,152830..153075,153371..153515,154290..154441,154523..154630,155110..155233,155486..155589,155697..155872,156427..156552,156900..157017,157690..157751,158973..159042,159500..159674,175716..175808))
location: region:152010-175808:-1
so has part: feature:175716-175808:-1:exon
so has part: feature:159500-159674:-1:exon
so has part: feature:158973-159042:-1:exon
so has part: feature:157690-157751:-1:exon
so has part: feature:156900-157017:-1:exon
so has part: feature:156427-156552:-1:exon
so has part: feature:155697-155872:-1:exon
so has part: feature:155486-155589:-1:exon
so has part: feature:155110-155233:-1:exon
so has part: feature:154523-154630:-1:exon
so has part: feature:154290-154441:-1:exon
so has part: feature:153371-153515:-1:exon
so has part: feature:152830-153075:-1:exon
so has part: feature:152488-152613:-1:exon
so has part: feature:152010-152390:-1:exon

position:152010:-1
position: 152010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175716-175808:-1:exon

position:175716:-1
position: 175716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159500-159674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158973-159042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157690-157751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156900-157017:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156427-156552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155697-155872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155486-155589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155110-155233:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154523-154630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154290-154441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153371-153515:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152830-153075:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152488-152613:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:152010-152390:-1:exon

LOC100545908
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545908
product: protein-arginine deiminase type-1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031556622.1
SIO_010081: LOC100545908
subclass of: SO_0000673
so part of: LOC100545908
location: complement(join(152010..152390,152488..152613,152830..152909,152982..153075,153371..153515,154290..154441,154523..154630,155110..155233,155486..155589,155697..155872,156427..156552,156900..157017,157690..157751,158973..159042,159500..159674,161650..161841))
location: region:152010-161841:-1
so has part: feature:161650-161841:-1:exon
so has part: feature:159500-159674:-1:exon
so has part: feature:158973-159042:-1:exon
so has part: feature:157690-157751:-1:exon
so has part: feature:156900-157017:-1:exon
so has part: feature:156427-156552:-1:exon
so has part: feature:155697-155872:-1:exon
so has part: feature:155486-155589:-1:exon
so has part: feature:155110-155233:-1:exon
so has part: feature:154523-154630:-1:exon
so has part: feature:154290-154441:-1:exon
so has part: feature:153371-153515:-1:exon
so has part: feature:152982-153075:-1:exon
so has part: feature:152830-152909:-1:exon
so has part: feature:152488-152613:-1:exon
so has part: feature:152010-152390:-1:exon

position:161841:-1
position: 161841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161650-161841:-1:exon

position:161650:-1
position: 161650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:159500-159674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158973-159042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157690-157751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156900-157017:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156427-156552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155697-155872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155486-155589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155110-155233:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154523-154630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154290-154441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153371-153515:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152982-153075:-1:exon

position:152982:-1
position: 152982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:152830-152909:-1:exon

position:152909:-1
position: 152909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:152488-152613:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:152010-152390:-1:exon

LOC100545908
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545908
product: protein-arginine deiminase type-1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031556620.1
SIO_010081: LOC100545908
subclass of: SO_0000673
so part of: LOC100545908
location: complement(join(152010..152390,152488..152613,152830..153075,153371..153515,154290..154441,154523..154630,155110..155233,155486..155589,155697..155872,156427..156552,156900..157017,157690..157751,158973..159042,159500..159674,161650..161841))
location: region:152010-161841:-1
so has part: feature:161650-161841:-1:exon
so has part: feature:159500-159674:-1:exon
so has part: feature:158973-159042:-1:exon
so has part: feature:157690-157751:-1:exon
so has part: feature:156900-157017:-1:exon
so has part: feature:156427-156552:-1:exon
so has part: feature:155697-155872:-1:exon
so has part: feature:155486-155589:-1:exon
so has part: feature:155110-155233:-1:exon
so has part: feature:154523-154630:-1:exon
so has part: feature:154290-154441:-1:exon
so has part: feature:153371-153515:-1:exon
so has part: feature:152830-153075:-1:exon
so has part: feature:152488-152613:-1:exon
so has part: feature:152010-152390:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161650-161841:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159500-159674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158973-159042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157690-157751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156900-157017:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156427-156552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155697-155872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155486-155589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155110-155233:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154523-154630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154290-154441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153371-153515:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152830-153075:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152488-152613:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:152010-152390:-1:exon

LOC100545908
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-arginine deiminase type-1 isoform X2
translation: MWWTGTSGSPHFLEVADRCIPPYTQRSTPKGATSFDVHATSAVTVHIIHSPMTKPMLNSRWPLDPDIEVVVTIGVTSKTVNDNKVKISYYGWEENEISVAWLYLTCVDISLDVDVSRNGRVRSKGKDKAKWTWGPDGQGAVLLVNCDKDSPNTVGTDSNQVDIQTPADLKDMSLMLLRTQGPSSIFADYKVVLHVSESDADKVRVFHAIRSDSHPQYKPVLGPGMLSCTLDCVRSGENTFYVEGLAFPDAGFSGLVSISVSLLEVPHKYSPGTPIFTDTVVFRMAPWIMTPNTQQPLEVFVCSIKKGINSNEVFLEELQALLRKANCKMTICSELESRSDRWIQDELEFGYVEAPHKSFPVVFDSPRNRGLKDFAFKKILGPDFGYVTRVPHGCDACSLDSFGNLDVSPPVTVRGKEYPLGRILIGSPLPWASGRRMSKVVRDFLYAQKVQAPVEVYSEWLSVGHVDEFLTFVPAYDRKGFRLLLASPTACFKLFQEKQRQGHGEATQLVGKAMGKDVPISLGAGDVPHQCPHIGIVGSERRSIDDILADEGLRNDNKHVQRCIDWNRDLLKHELGLSEQDIIDIPQLFILRGSRAEALFPDMVNMLVLGRHLGIPKPFGPLVAGQCCLEERVRALLQPLGLSCTFINDFFSYHKLAGEVHCGTNVRRKPFAFKWWRMVP
SIO_010081: LOC100545908
subclass of: SO_0000673
so part of: LOC100545908
location: complement(join(152157..152390,152488..152613,152830..153075,153371..153515,154290..154441,154523..154630,155110..155233,155486..155589,155697..155872,156427..156552,156900..157017,157690..157751,158973..159042,159500..159674,175716..175792))
location: region:152157-175792:-1
so has part: feature:175716-175792:-1:exon
so has part: feature:159500-159674:-1:exon
so has part: feature:158973-159042:-1:exon
so has part: feature:157690-157751:-1:exon
so has part: feature:156900-157017:-1:exon
so has part: feature:156427-156552:-1:exon
so has part: feature:155697-155872:-1:exon
so has part: feature:155486-155589:-1:exon
so has part: feature:155110-155233:-1:exon
so has part: feature:154523-154630:-1:exon
so has part: feature:154290-154441:-1:exon
so has part: feature:153371-153515:-1:exon
so has part: feature:152830-153075:-1:exon
so has part: feature:152488-152613:-1:exon
so has part: feature:152157-152390:-1:exon

XP_019477962.1
type: Protein
SIO_000068: ncbiprotein

position:152157:-1
position: 152157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:175792:-1
position: 175792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175716-175792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159500-159674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158973-159042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157690-157751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156900-157017:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156427-156552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155697-155872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155486-155589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155110-155233:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154523-154630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154290-154441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153371-153515:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152830-153075:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152488-152613:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:152157-152390:-1:exon

LOC100545908
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-arginine deiminase type-1 isoform X3
translation: MSQRQVVQMSTSHASYGVCVLGSEVFLDTHRSTPKGATSFDVHATSAVTVHIIHSPMTKPMLNSRWPLDPDIEVVVTIGVTSKTVNDNKVKISYYGWEENEISVAWLYLTCVDISLDVDVSRNGRVRSKGKDKAKWTWGPDGQGAVLLVNCDKDSPNTVGTDSNQVDIQTPADLKDMSLMLLRTQGPSSIFADYKVVLHVSESDADKVRVFHAIRSDSHPQYKPVLGPGMLSCTLDCVRSGENTFYVEGLAFPDAGFSGLVSISVSLLEVPHKYSPGTPIFTDTVVFRMAPWIMTPNTQQPLEVFVCSIKKGINSNEVFLEELQALLRKANCKMTICSELESRSDRWIQDELEFGYVEAPHKSFPVVFDSPRNRGLKDFAFKKILGPDFGYVTRVPHGCDACSLDSFGNLDVSPPVTVRGKEYPLGRILIGSPLPWASGRRMSKVVRDFLYAQKVQAPVEVYSEWLSVGHVDEFLTFVPAYDRKGFRLLLASPTACFKLFQEKQRQGHGEATQLVGIVGSERRSIDDILADEGLRNDNKHVQRCIDWNRDLLKHELGLSEQDIIDIPQLFILRGSRAEALFPDMVNMLVLGRHLGIPKPFGPLVAGQCCLEERVRALLQPLGLSCTFINDFFSYHKLAGEVHCGTNVRRKPFAFKWWRMVP
SIO_010081: LOC100545908
subclass of: SO_0000673
so part of: LOC100545908
location: complement(join(152157..152390,152488..152613,152830..152909,152982..153075,153371..153515,154290..154441,154523..154630,155110..155233,155486..155589,155697..155872,156427..156552,156900..157017,157690..157751,158973..159042,159500..159674,161650..161741))
location: region:152157-161741:-1
so has part: feature:161650-161741:-1:exon
so has part: feature:159500-159674:-1:exon
so has part: feature:158973-159042:-1:exon
so has part: feature:157690-157751:-1:exon
so has part: feature:156900-157017:-1:exon
so has part: feature:156427-156552:-1:exon
so has part: feature:155697-155872:-1:exon
so has part: feature:155486-155589:-1:exon
so has part: feature:155110-155233:-1:exon
so has part: feature:154523-154630:-1:exon
so has part: feature:154290-154441:-1:exon
so has part: feature:153371-153515:-1:exon
so has part: feature:152982-153075:-1:exon
so has part: feature:152830-152909:-1:exon
so has part: feature:152488-152613:-1:exon
so has part: feature:152157-152390:-1:exon

XP_031412482.1
type: Protein
SIO_000068: ncbiprotein

position:161741:-1
position: 161741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161650-161741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159500-159674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158973-159042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157690-157751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156900-157017:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156427-156552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155697-155872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155486-155589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155110-155233:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154523-154630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154290-154441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153371-153515:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152982-153075:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152830-152909:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:152488-152613:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:152157-152390:-1:exon

LOC100545908
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-arginine deiminase type-1 isoform X1
translation: MSQRQVVQMSTSHASYGVCVLGSEVFLDTHRSTPKGATSFDVHATSAVTVHIIHSPMTKPMLNSRWPLDPDIEVVVTIGVTSKTVNDNKVKISYYGWEENEISVAWLYLTCVDISLDVDVSRNGRVRSKGKDKAKWTWGPDGQGAVLLVNCDKDSPNTVGTDSNQVDIQTPADLKDMSLMLLRTQGPSSIFADYKVVLHVSESDADKVRVFHAIRSDSHPQYKPVLGPGMLSCTLDCVRSGENTFYVEGLAFPDAGFSGLVSISVSLLEVPHKYSPGTPIFTDTVVFRMAPWIMTPNTQQPLEVFVCSIKKGINSNEVFLEELQALLRKANCKMTICSELESRSDRWIQDELEFGYVEAPHKSFPVVFDSPRNRGLKDFAFKKILGPDFGYVTRVPHGCDACSLDSFGNLDVSPPVTVRGKEYPLGRILIGSPLPWASGRRMSKVVRDFLYAQKVQAPVEVYSEWLSVGHVDEFLTFVPAYDRKGFRLLLASPTACFKLFQEKQRQGHGEATQLVGKAMGKDVPISLGAGDVPHQCPHIGIVGSERRSIDDILADEGLRNDNKHVQRCIDWNRDLLKHELGLSEQDIIDIPQLFILRGSRAEALFPDMVNMLVLGRHLGIPKPFGPLVAGQCCLEERVRALLQPLGLSCTFINDFFSYHKLAGEVHCGTNVRRKPFAFKWWRMVP
SIO_010081: LOC100545908
subclass of: SO_0000673
so part of: LOC100545908
location: complement(join(152157..152390,152488..152613,152830..153075,153371..153515,154290..154441,154523..154630,155110..155233,155486..155589,155697..155872,156427..156552,156900..157017,157690..157751,158973..159042,159500..159674,161650..161741))
location: region:152157-161741:-1
so has part: feature:161650-161741:-1:exon
so has part: feature:159500-159674:-1:exon
so has part: feature:158973-159042:-1:exon
so has part: feature:157690-157751:-1:exon
so has part: feature:156900-157017:-1:exon
so has part: feature:156427-156552:-1:exon
so has part: feature:155697-155872:-1:exon
so has part: feature:155486-155589:-1:exon
so has part: feature:155110-155233:-1:exon
so has part: feature:154523-154630:-1:exon
so has part: feature:154290-154441:-1:exon
so has part: feature:153371-153515:-1:exon
so has part: feature:152830-153075:-1:exon
so has part: feature:152488-152613:-1:exon
so has part: feature:152157-152390:-1:exon

XP_031412480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161650-161741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:159500-159674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:158973-159042:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157690-157751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156900-157017:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:156427-156552:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155697-155872:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155486-155589:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:155110-155233:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154523-154630:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:154290-154441:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:153371-153515:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152830-153075:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152488-152613:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:152157-152390:-1:exon

LOC100545908
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-arginine deiminase type-1 isoform X4
translation: MTKPMLNSRWPLDPDIEVVVTIGVTSKTVNDNKVKISYYGWEENEISVAWLYLTCVDISLDVDVSRNGRVRSKGKDKAKWTWGPDGQGAVLLVNCDKDSPNTVGTDSNQVDIQTPADLKDMSLMLLRTQGPSSIFADYKVVLHVSESDADKVRVFHAIRSDSHPQYKPVLGPGMLSCTLDCVRSGENTFYVEGLAFPDAGFSGLVSISVSLLEVPHKYSPGTPIFTDTVVFRMAPWIMTPNTQQPLEVFVCSIKKGINSNEVFLEELQALLRKANCKMTICSELESRSDRWIQDELEFGYVEAPHKSFPVVFDSPRNRGLKDFAFKKILGPDFGYVTRVPHGCDACSLDSFGNLDVSPPVTVRGKEYPLGRILIGSPLPWASGRRMSKVVRDFLYAQKVQAPVEVYSEWLSVGHVDEFLTFVPAYDRKGFRLLLASPTACFKLFQEKQRQGHGEATQLVGKAMGKDVPISLGAGDVPHQCPHIGIVGSERRSIDDILADEGLRNDNKHVQRCIDWNRDLLKHELGLSEQDIIDIPQLFILRGSRAEALFPDMVNMLVLGRHLGIPKPFGPLVAGQCCLEERVRALLQPLGLSCTFINDFFSYHKLAGEVHCGTNVRRKPFAFKWWRMVP
SIO_010081: LOC100545908
subclass of: SO_0000673
so part of: LOC100545908
location: complement(join(152157..152390,152488..152613,152830..153075,153371..153515,154290..154441,154523..154630,155110..155233,155486..155589,155697..155872,156427..156552,156900..157017,157690..157751,158973..159042,159500..159598))
location: region:152157-159598:-1
so has part: feature:159500-159598:-1:exon
so has part: feature:158973-159042:-1:exon
so has part: feature:157690-157751:-1:exon
so has part: feature:156900-157017:-1:exon
so has part: feature:156427-156552:-1:exon
so has part: feature:155697-155872:-1:exon
so has part: feature:155486-155589:-1:exon
so has part: feature:155110-155233:-1:exon
so has part: feature:154523-154630:-1:exon
so has part: feature:154290-154441:-1:exon
so has part: feature:153371-153515:-1:exon
so has part: feature:152830-153075:-1:exon
so has part: feature:152488-152613:-1:exon
so has part: feature:152157-152390:-1:exon

XP_019477963.1
type: Protein
SIO_000068: ncbiprotein

position:159598:-1
position: 159598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:159500-159598:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:158973-159042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157690-157751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156900-157017:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156427-156552:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:155697-155872:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:155486-155589:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:155110-155233:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:154523-154630:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:154290-154441:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:153371-153515:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:152830-153075:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:152488-152613:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152157-152390:-1:exon

LOC100546062
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 164876..175798
location: region:164876-175798:1
so has part: feature:164876-175798:1:exon
subclass of: SO_0000010

100546062
type: Gene
SIO_000068: ncbigene

position:164876:1
position: 164876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175798:1
position: 175798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164876-175798:1:exon

LOC100546062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546062
product: protein-arginine deiminase type-2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003212187.4
SIO_010081: LOC100546062
subclass of: SO_0000673
so part of: LOC100546062
location: join(164876..166486,167672..167855,167939..168008,168096..168157,168252..168369,168866..168991,169642..169820,169995..170098,170184..170295,170371..170478,172021..172172,172784..172928,173252..173345,174363..174448,174640..174765,175245..175798)
location: region:164876-175798:1
so has part: feature:164876-166486:1:exon
so has part: feature:167672-167855:1:exon
so has part: feature:167939-168008:1:exon
so has part: feature:168096-168157:1:exon
so has part: feature:168252-168369:1:exon
so has part: feature:168866-168991:1:exon
so has part: feature:169642-169820:1:exon
so has part: feature:169995-170098:1:exon
so has part: feature:170184-170295:1:exon
so has part: feature:170371-170478:1:exon
so has part: feature:172021-172172:1:exon
so has part: feature:172784-172928:1:exon
so has part: feature:173252-173345:1:exon
so has part: feature:174363-174448:1:exon
so has part: feature:174640-174765:1:exon
so has part: feature:175245-175798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164876-166486:1:exon

position:166486:1
position: 166486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167672-167855:1:exon

position:167672:1
position: 167672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:167855:1
position: 167855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167939-168008:1:exon

position:167939:1
position: 167939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168008:1
position: 168008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:168096-168157:1:exon

position:168096:1
position: 168096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168157:1
position: 168157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:168252-168369:1:exon

position:168252:1
position: 168252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168369:1
position: 168369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:168866-168991:1:exon

position:168866:1
position: 168866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168991:1
position: 168991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:169642-169820:1:exon

position:169642:1
position: 169642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169820:1
position: 169820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:169995-170098:1:exon

position:169995:1
position: 169995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170098:1
position: 170098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:170184-170295:1:exon

position:170184:1
position: 170184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170295:1
position: 170295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:170371-170478:1:exon

position:170371:1
position: 170371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:170478:1
position: 170478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:172021-172172:1:exon

position:172021:1
position: 172021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172172:1
position: 172172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:172784-172928:1:exon

position:172784:1
position: 172784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172928:1
position: 172928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:173252-173345:1:exon

position:173252:1
position: 173252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173345:1
position: 173345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:174363-174448:1:exon

position:174363:1
position: 174363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174448:1
position: 174448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:174640-174765:1:exon

position:174640:1
position: 174640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174765:1
position: 174765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:175245-175798:1:exon

position:175245:1
position: 175245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100546062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-arginine deiminase type-2
translation: MPRERTLRLQPGSRIHALCVLGTHMATDVYGAAPAGAVAFGVKHTEGVNVEVAFQGRAEPGLLPGVSHWPLNEGTVLRFSMSRASTEVNDNKVIVIFYAEGGQPIDQARIFLTGIGISLDVDADQDGVVEKNNPNKASWMWGPEGHGAILLVTCDRDSPLSPAPDCDDERVFSKEDLLDMSRMVLRIEGPQHLPRGYEIVLYVHMSDADKVGVFHMQNPFFGQHYVHVLGRRKLCHIVQYTGGAAELEFFVEGLQFPDETFPGLISIHVSLLETLAEGIPLSPIFTDTVVFRVAPWIMMPNTLAPENVFVCSVKDNYLYIKEIKNLVNKAGCDLKVCFGYINRGDRWMQDEIEFGYTQAPHKSFAVVLDSPQDTGLEQFPIKELLGPDFGYVRREPLFKAISSLDSFGNLEVSPPVTAAGKEYPLGRILIGSSFPTPAGRRMTRVVRDFLFAQQVQAPVELFSDWLAMGHVNEFVTFVPSPDAKRFRMLMASPAACYKLFRQKQKEGQGEATMFKGYSGTDTKRVTINKVLSNGIMMQQNQYVQRCIDWNRDILKKELGLTEEDIIDLPALFKLDKGKAMPYFPNMVPMLILSKELGIPKPFGPLVGGECCLEHHVRSLLEPLGLRCRFLEDISSYHGRLGEVHCGTNVHRRPFAFRWWHVTP
SIO_010081: LOC100546062
subclass of: SO_0000673
so part of: LOC100546062
location: join(166395..166486,167672..167855,167939..168008,168096..168157,168252..168369,168866..168991,169642..169820,169995..170098,170184..170295,170371..170478,172021..172172,172784..172928,173252..173345,174363..174448,174640..174765,175245..175478)
location: region:166395-175478:1
so has part: feature:166395-166486:1:exon
so has part: feature:167672-167855:1:exon
so has part: feature:167939-168008:1:exon
so has part: feature:168096-168157:1:exon
so has part: feature:168252-168369:1:exon
so has part: feature:168866-168991:1:exon
so has part: feature:169642-169820:1:exon
so has part: feature:169995-170098:1:exon
so has part: feature:170184-170295:1:exon
so has part: feature:170371-170478:1:exon
so has part: feature:172021-172172:1:exon
so has part: feature:172784-172928:1:exon
so has part: feature:173252-173345:1:exon
so has part: feature:174363-174448:1:exon
so has part: feature:174640-174765:1:exon
so has part: feature:175245-175478:1:exon

XP_003212235.1
type: Protein
SIO_000068: ncbiprotein

position:166395:1
position: 166395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175478:1
position: 175478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:166395-166486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167672-167855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:167939-168008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:168096-168157:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:168252-168369:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:168866-168991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:169642-169820:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:169995-170098:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:170184-170295:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:170371-170478:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:172021-172172:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:172784-172928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:173252-173345:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:174363-174448:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:174640-174765:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:175245-175478:1:exon

SDHB
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SDHB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 175892..184133
location: region:175892-184133:1
so has part: feature:175892-184133:1:exon
subclass of: SO_0000010

100543850
type: Gene
SIO_000068: ncbigene

position:175892:1
position: 175892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184133:1
position: 184133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175892-184133:1:exon

SDHB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SDHB
product: succinate dehydrogenase complex iron sulfur subunit B
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003212173.4
SIO_010081: SDHB
subclass of: SO_0000673
so part of: SDHB
location: join(175892..175981,176730..176857,178065..178150,180072..180207,180522..180638,181932..182033,182343..182465,183917..184133)
location: region:175892-184133:1
so has part: feature:175892-175981:1:exon
so has part: feature:176730-176857:1:exon
so has part: feature:178065-178150:1:exon
so has part: feature:180072-180207:1:exon
so has part: feature:180522-180638:1:exon
so has part: feature:181932-182033:1:exon
so has part: feature:182343-182465:1:exon
so has part: feature:183917-184133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175892-175981:1:exon

position:175981:1
position: 175981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176730-176857:1:exon

position:176730:1
position: 176730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176857:1
position: 176857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:178065-178150:1:exon

position:178065:1
position: 178065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:178150:1
position: 178150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:180072-180207:1:exon

position:180072:1
position: 180072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180207:1
position: 180207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:180522-180638:1:exon

position:180522:1
position: 180522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180638:1
position: 180638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:181932-182033:1:exon

position:181932:1
position: 181932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182033:1
position: 182033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:182343-182465:1:exon

position:182343:1
position: 182343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182465:1
position: 182465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:183917-184133:1:exon

position:183917:1
position: 183917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SDHB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SDHB
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
translation: MAAAVVGVSLRRGVPARLLGARLRPICRGAQTAAAATSRIKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKKXDPDLSKITKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKEKAAAA
SIO_010081: SDHB
subclass of: SO_0000673
so part of: SDHB
location: join(175907..175981,176730..176857,178065..178150,180072..180207,180522..180638,181932..182033,182343..182465,183917..183994)
location: region:175907-183994:1
so has part: feature:175907-175981:1:exon
so has part: feature:176730-176857:1:exon
so has part: feature:178065-178150:1:exon
so has part: feature:180072-180207:1:exon
so has part: feature:180522-180638:1:exon
so has part: feature:181932-182033:1:exon
so has part: feature:182343-182465:1:exon
so has part: feature:183917-183994:1:exon

XP_003212221.2
type: Protein
SIO_000068: ncbiprotein

position:175907:1
position: 175907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183994:1
position: 183994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175907-175981:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176730-176857:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:178065-178150:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180072-180207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:180522-180638:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:181932-182033:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:182343-182465:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:183917-183994:1:exon

MRPS16
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MRPS16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 184790..188177
location: region:184790-188177:1
so has part: feature:184790-188177:1:exon
subclass of: SO_0000010

100544106
type: Gene
SIO_000068: ncbigene

position:184790:1
position: 184790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188177:1
position: 188177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184790-188177:1:exon

MRPS16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MRPS16
product: mitochondrial ribosomal protein S16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 184 samples with support for all annotated introns
transcript id: XM_010722684.3
SIO_010081: MRPS16
subclass of: SO_0000673
so part of: MRPS16
location: join(184790..184897,184966..185226,185291..185471,187915..188177)
location: region:184790-188177:1
so has part: feature:184790-184897:1:exon
so has part: feature:184966-185226:1:exon
so has part: feature:185291-185471:1:exon
so has part: feature:187915-188177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184790-184897:1:exon

position:184897:1
position: 184897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:184966-185226:1:exon

position:184966:1
position: 184966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185226:1
position: 185226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185291-185471:1:exon

position:185291:1
position: 185291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185471:1
position: 185471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:187915-188177:1:exon

position:187915:1
position: 187915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPS16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MRPS16
product: mitochondrial ribosomal protein S16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003212175.4
SIO_010081: MRPS16
subclass of: SO_0000673
so part of: MRPS16
location: join(184790..184897,184966..185226,185291..185454,187915..188177)
location: region:184790-188177:1
so has part: feature:184790-184897:1:exon
so has part: feature:184966-185226:1:exon
so has part: feature:185291-185454:1:exon
so has part: feature:187915-188177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:184790-184897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184966-185226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185291-185454:1:exon

position:185454:1
position: 185454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:187915-188177:1:exon

MRPS16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MRPS16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S16, mitochondrial
translation: MVQLGSGLLKSYRGGHVVIRFALGGCTNRPFYRIVAAHSKRARDGKYLEQLGCLDPLPNAHGEKVAGLNLERLRHWLGCGAQLSRPAEKLLGLAGFLPLHPMTITNAERLRRRRRRAQESVVPPAEGGSQEPGAAV
SIO_010081: MRPS16
subclass of: SO_0000673
so part of: MRPS16
location: join(184885..184897,184966..185226,185291..185427)
location: region:184885-185427:1
so has part: feature:184885-184897:1:exon
so has part: feature:184966-185226:1:exon
so has part: feature:185291-185427:1:exon

XP_003212223.2
type: Protein
SIO_000068: ncbiprotein

position:184885:1
position: 184885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185427:1
position: 185427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184885-184897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184966-185226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185291-185427:1:exon

MRPS16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MRPS16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S16, mitochondrial
translation: MVQLGSGLLKSYRGGHVVIRFALGGCTNRPFYRIVAAHSKRARDGKYLEQLGCLDPLPNAHGEKVAGLNLERLRHWLGCGAQLSRPAEKLLGLAGFLPLHPMTITNAERLRRRRRRAQESVVPPAEGGSQEPGAAV
SIO_010081: MRPS16
subclass of: SO_0000673
so part of: MRPS16
location: join(184885..184897,184966..185226,185291..185427)
location: region:184885-185427:1
so has part: feature:184885-184897:1:exon
so has part: feature:184966-185226:1:exon
so has part: feature:185291-185427:1:exon

XP_010720986.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:184885-184897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:184966-185226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:185291-185427:1:exon

SLC45A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(187425..222759)
location: region:187425-222759:-1
so has part: feature:187425-222759:-1:exon
subclass of: SO_0000010

100544261
type: Gene
SIO_000068: ncbigene

position:187425:-1
position: 187425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222759:-1
position: 222759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187425-222759:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019622414.2
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(187425..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195597,196027..196119,197100..197512,198886..200058,200701..200839,222680..222759))
location: region:187425-222759:-1
so has part: feature:222680-222759:-1:exon
so has part: feature:200701-200839:-1:exon
so has part: feature:198886-200058:-1:exon
so has part: feature:197100-197512:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195597:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:187425-190548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:222680-222759:-1:exon

position:222680:-1
position: 222680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:200701-200839:-1:exon

position:200701:-1
position: 200701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200839:-1
position: 200839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198886-200058:-1:exon

position:198886:-1
position: 198886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200058:-1
position: 200058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197100-197512:-1:exon

position:197100:-1
position: 197100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197512:-1
position: 197512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:196027-196119:-1:exon

position:196027:-1
position: 196027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196119:-1
position: 196119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:195373-195597:-1:exon

position:195373:-1
position: 195373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195597:-1
position: 195597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:193651-194387:-1:exon

position:193651:-1
position: 193651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194387:-1
position: 194387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:192288-192441:-1:exon

position:192288:-1
position: 192288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192441:-1
position: 192441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:191357-191533:-1:exon

position:191357:-1
position: 191357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191533:-1
position: 191533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:190615-190820:-1:exon

position:190615:-1
position: 190615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190820:-1
position: 190820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:187425-190548:-1:exon

position:190548:-1
position: 190548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_010722685.3
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(187425..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195597,196027..196119,197100..197512,198886..199238,199891..200058,200701..204265))
location: region:187425-204265:-1
so has part: feature:200701-204265:-1:exon
so has part: feature:199891-200058:-1:exon
so has part: feature:198886-199238:-1:exon
so has part: feature:197100-197512:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195597:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:187425-190548:-1:exon

position:204265:-1
position: 204265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200701-204265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199891-200058:-1:exon

position:199891:-1
position: 199891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198886-199238:-1:exon

position:199238:-1
position: 199238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197100-197512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196027-196119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195373-195597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193651-194387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:192288-192441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191357-191533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190615-190820:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187425-190548:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_019622413.2
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(187425..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195597,196027..196119,197100..197512,198886..199241,199891..200058,200701..204265))
location: region:187425-204265:-1
so has part: feature:200701-204265:-1:exon
so has part: feature:199891-200058:-1:exon
so has part: feature:198886-199241:-1:exon
so has part: feature:197100-197512:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195597:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:187425-190548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200701-204265:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199891-200058:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:198886-199241:-1:exon

position:199241:-1
position: 199241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197100-197512:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196027-196119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:195373-195597:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:193651-194387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:192288-192441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:191357-191533:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:190615-190820:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:187425-190548:-1:exon

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_010722686.3
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(187425..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195498,196027..196119,197100..198583))
location: region:187425-198583:-1
so has part: feature:197100-198583:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195498:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:187425-190548:-1:exon

position:198583:-1
position: 198583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197100-198583:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196027-196119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195373-195498:-1:exon

position:195498:-1
position: 195498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:193651-194387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192288-192441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191357-191533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190615-190820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187425-190548:-1:exon

SLC45A1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 118 samples with support for all annotated introns
transcript id: XR_795820.3
SIO_010081: SLC45A1
so part of: SLC45A1
location: complement(join(187425..189928,190203..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195597,196027..196119,197100..198582))
location: region:187425-198582:-1
so has part: feature:197100-198582:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195597:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:190203-190548:-1:exon
so has part: feature:187425-189928:-1:exon

position:198582:-1
position: 198582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197100-198582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196027-196119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195373-195597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193651-194387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192288-192441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191357-191533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190615-190820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190203-190548:-1:exon

position:190203:-1
position: 190203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:187425-189928:-1:exon

position:189928:-1
position: 189928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC45A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC45A1
product: solute carrier family 45 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 173 samples with support for all annotated introns
transcript id: XM_003212176.4
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(187425..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195597,196027..196119,197100..198582))
location: region:187425-198582:-1
so has part: feature:197100-198582:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195597:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:187425-190548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:197100-198582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196027-196119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195373-195597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193651-194387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192288-192441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191357-191533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190615-190820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187425-190548:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X3
translation: MLSYFSSRLSAMMIPPSATPPVSDAALLPSVASQETWRSQVPGYPGSVTQHISHRANNFKRHPKRKKFIRPSPPPPPNTPCPIDLIGFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAVVCGVVLMDFSADSADNPSHAYMMDVCSPVDQDRGLNIHALLAGLGGGFGYVIGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTVLTLISIPERPLGSFSRKKKVMKSPSLPLPPSPPLFEEGVSENFTSHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDNSLTGINEFASSFGTSNIDSVLIDCFTGGHSSYLALPASLPRQPVSVSFPRVPDGCYQQENGILEQGERGITSGPDGEALRVGSLDAIKPRSSGILKRPQSLAIPDIVTGHCPDSSRRRNVTFSQQVANILLDGVKYESELNGSGETSEQPLSMRLLCSTICHMPRALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFEGNPKAPHNSVEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLATLSRNIYVVLSLCTTYGILFATLCTLPYSLLCDYYQSCEFAGSHVEGTRRGMGVDISLLSCQYFLAQILVALAMGPLTTAVGSASGTMYFASLVSFLGCLFSSLCVIYEPTLSAEELPPNEEQSPLLPCVQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(190264..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195498,196027..196119,197100..197535))
location: region:190264-197535:-1
so has part: feature:197100-197535:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195498:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:190264-190548:-1:exon

XP_010720988.1
type: Protein
SIO_000068: ncbiprotein

position:190264:-1
position: 190264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197535:-1
position: 197535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197100-197535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196027-196119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195373-195498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193651-194387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192288-192441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191357-191533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190615-190820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190264-190548:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X1
translation: MLSYFSSRLSAMMIPPSATPPVSDAALLPSVASQETWRSQVPGYPGSVTQHISHRANNFKRHPKRKKFIRPSPPPPPNTPCPIDLIGFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAVGALCGLSLMLNGRDIGSALSDTVNNHKWGIVLTVCGVVLMDFSADSADNPSHAYMMDVCSPVDQDRGLNIHALLAGLGGGFGYVIGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTVLTLISIPERPLGSFSRKKKVMKSPSLPLPPSPPLFEEGVSENFTSHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDNSLTGINEFASSFGTSNIDSVLIDCFTGGHSSYLALPASLPRQPVSVSFPRVPDGCYQQENGILEQGERGITSGPDGEALRVGSLDAIKPRSSGILKRPQSLAIPDIVTGHCPDSSRRRNVTFSQQVANILLDGVKYESELNGSGETSEQPLSMRLLCSTICHMPRALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFEGNPKAPHNSVEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLATLSRNIYVVLSLCTTYGILFATLCTLPYSLLCDYYQSCEFAGSHVEGTRRGMGVDISLLSCQYFLAQILVALAMGPLTTAVGSASGTMYFASLVSFLGCLFSSLCVIYEPTLSAEELPPNEEQSPLLPCVQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(190264..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195597,196027..196119,197100..197535))
location: region:190264-197535:-1
so has part: feature:197100-197535:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195597:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:190264-190548:-1:exon

XP_003212224.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197100-197535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196027-196119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195373-195597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193651-194387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192288-192441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191357-191533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190615-190820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190264-190548:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X2
translation: MMIPPSATPPVSDAALLPSVASQETWRSQVPGYPGSVTQHISHRANNFKRHPKRKKFIRPSPPPPPNTPCPIDLIGFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAVGALCGLSLMLNGRDIGSALSDTVNNHKWGIVLTVCGVVLMDFSADSADNPSHAYMMDVCSPVDQDRGLNIHALLAGLGGGFGYVIGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTVLTLISIPERPLGSFSRKKKVMKSPSLPLPPSPPLFEEGVSENFTSHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDNSLTGINEFASSFGTSNIDSVLIDCFTGGHSSYLALPASLPRQPVSVSFPRVPDGCYQQENGILEQGERGITSGPDGEALRVGSLDAIKPRSSGILKRPQSLAIPDIVTGHCPDSSRRRNVTFSQQVANILLDGVKYESELNGSGETSEQPLSMRLLCSTICHMPRALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFEGNPKAPHNSVEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLATLSRNIYVVLSLCTTYGILFATLCTLPYSLLCDYYQSCEFAGSHVEGTRRGMGVDISLLSCQYFLAQILVALAMGPLTTAVGSASGTMYFASLVSFLGCLFSSLCVIYEPTLSAEELPPNEEQSPLLPCVQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(190264..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195597,196027..196119,197100..197502))
location: region:190264-197502:-1
so has part: feature:197100-197502:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195597:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:190264-190548:-1:exon

XP_019477958.1
type: Protein
SIO_000068: ncbiprotein

position:197502:-1
position: 197502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:197100-197502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196027-196119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195373-195597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193651-194387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192288-192441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191357-191533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190615-190820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190264-190548:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X2
translation: MMIPPSATPPVSDAALLPSVASQETWRSQVPGYPGSVTQHISHRANNFKRHPKRKKFIRPSPPPPPNTPCPIDLIGFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAVGALCGLSLMLNGRDIGSALSDTVNNHKWGIVLTVCGVVLMDFSADSADNPSHAYMMDVCSPVDQDRGLNIHALLAGLGGGFGYVIGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTVLTLISIPERPLGSFSRKKKVMKSPSLPLPPSPPLFEEGVSENFTSHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDNSLTGINEFASSFGTSNIDSVLIDCFTGGHSSYLALPASLPRQPVSVSFPRVPDGCYQQENGILEQGERGITSGPDGEALRVGSLDAIKPRSSGILKRPQSLAIPDIVTGHCPDSSRRRNVTFSQQVANILLDGVKYESELNGSGETSEQPLSMRLLCSTICHMPRALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFEGNPKAPHNSVEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLATLSRNIYVVLSLCTTYGILFATLCTLPYSLLCDYYQSCEFAGSHVEGTRRGMGVDISLLSCQYFLAQILVALAMGPLTTAVGSASGTMYFASLVSFLGCLFSSLCVIYEPTLSAEELPPNEEQSPLLPCVQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(190264..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195597,196027..196119,197100..197502))
location: region:190264-197502:-1
so has part: feature:197100-197502:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195597:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:190264-190548:-1:exon

XP_019477959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197100-197502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196027-196119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195373-195597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193651-194387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192288-192441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191357-191533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190615-190820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190264-190548:-1:exon

SLC45A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC45A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-associated sugar transporter A isoform X2
translation: MMIPPSATPPVSDAALLPSVASQETWRSQVPGYPGSVTQHISHRANNFKRHPKRKKFIRPSPPPPPNTPCPIDLIGFGDLQPQRSFLELLFNGCILFGLEFSYAMETAYVTPVLLQMGLPDQLYGMVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAVGALCGLSLMLNGRDIGSALSDTVNNHKWGIVLTVCGVVLMDFSADSADNPSHAYMMDVCSPVDQDRGLNIHALLAGLGGGFGYVIGGIHWDKTSFGKAVGGQLRVIYVFTSIILTITTVLTLISIPERPLGSFSRKKKVMKSPSLPLPPSPPLFEEGVSENFTSHNSAHLYASFTSPVSPLSPLTPKYGSFVSRDNSLTGINEFASSFGTSNIDSVLIDCFTGGHSSYLALPASLPRQPVSVSFPRVPDGCYQQENGILEQGERGITSGPDGEALRVGSLDAIKPRSSGILKRPQSLAIPDIVTGHCPDSSRRRNVTFSQQVANILLDGVKYESELNGSGETSEQPLSMRLLCSTICHMPRALRNLCINHFLGWLSFEGMLLFYTDFMGEVVFEGNPKAPHNSVEYQKYNAGVTMGCWGMCIYAFSAAFYSAALEKLEERFSTRTLYFIAYLAFGLGTGLATLSRNIYVVLSLCTTYGILFATLCTLPYSLLCDYYQSCEFAGSHVEGTRRGMGVDISLLSCQYFLAQILVALAMGPLTTAVGSASGTMYFASLVSFLGCLFSSLCVIYEPTLSAEELPPNEEQSPLLPCVQDQ
SIO_010081: SLC45A1
subclass of: SO_0000673
so part of: SLC45A1
location: complement(join(190264..190548,190615..190820,191357..191533,192288..192441,193651..194387,195373..195597,196027..196119,197100..197502))
location: region:190264-197502:-1
so has part: feature:197100-197502:-1:exon
so has part: feature:196027-196119:-1:exon
so has part: feature:195373-195597:-1:exon
so has part: feature:193651-194387:-1:exon
so has part: feature:192288-192441:-1:exon
so has part: feature:191357-191533:-1:exon
so has part: feature:190615-190820:-1:exon
so has part: feature:190264-190548:-1:exon

XP_010720987.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:197100-197502:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196027-196119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195373-195597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193651-194387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:192288-192441:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:191357-191533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:190615-190820:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:190264-190548:-1:exon

ERRFI1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ERRFI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 223105..230669
location: region:223105-230669:1
so has part: feature:223105-230669:1:exon
subclass of: SO_0000010

100544417
type: Gene
SIO_000068: ncbigene

position:223105:1
position: 223105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230669:1
position: 230669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:223105-230669:1:exon

ERRFI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ERRFI1
product: ERBB receptor feedback inhibitor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 168 samples with support for all annotated introns
transcript id: XM_010722687.3
SIO_010081: ERRFI1
subclass of: SO_0000673
so part of: ERRFI1
location: join(223105..224958,227219..227414,227533..227609,228119..230669)
location: region:223105-230669:1
so has part: feature:223105-224958:1:exon
so has part: feature:227219-227414:1:exon
so has part: feature:227533-227609:1:exon
so has part: feature:228119-230669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:223105-224958:1:exon

position:224958:1
position: 224958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:227219-227414:1:exon

position:227219:1
position: 227219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227414:1
position: 227414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227533-227609:1:exon

position:227533:1
position: 227533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227609:1
position: 227609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:228119-230669:1:exon

position:228119:1
position: 228119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERRFI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ERRFI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ERBB receptor feedback inhibitor 1
translation: MSTAGVAAQEMRVPLKTGFLHASQGMGGLKTCWSSHSGFENTFFNVDPIAVAYNLNPSAEQRLPSIGHSSNCVSTNDHGFAESCIHVPSQKSSPAPVSPKNEQPISRYEDQLIPGFSKLSLTTGCVSEETPPHMPIKNGPIQFLSASSHDRSSRPLPPLPVHEDVTPDEVDREVEFLTSSDTDFLLEDYGLPPFKSSGSSRRSFRGCGQINYAYFDAATGPKPEDANPTQSLNGCISGIYPPPQQLHRRLRRSHSGPAGSLNKPVARLSGHLNRSSPNSDEDKPEIPPRVPIPPRALKPDYRRWSAEVASSAYSDEDRPPKVPPREPLSRSNSRTPSPKSLPSYLNGVMPPTQSFAPDPKYVSNKALQRQNSEGSSNRVPCILPIIENGKKASSTHYYLLPERPPYLDKYEKFFREAEESSSNTEVQSWSGDCMATSVPRLDSKPRMDIAGHLKRKHLSYVVSP
SIO_010081: ERRFI1
subclass of: SO_0000673
so part of: ERRFI1
location: join(227293..227414,227533..227609,228119..229314)
location: region:227293-229314:1
so has part: feature:227293-227414:1:exon
so has part: feature:227533-227609:1:exon
so has part: feature:228119-229314:1:exon

XP_010720989.1
type: Protein
SIO_000068: ncbiprotein

position:227293:1
position: 227293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229314:1
position: 229314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:227293-227414:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:227533-227609:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:228119-229314:1:exon

PARK7
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PARK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(236181..241094)
location: region:236181-241094:-1
so has part: feature:236181-241094:-1:exon
subclass of: SO_0000010

100544576
type: Gene
SIO_000068: ncbigene

position:236181:-1
position: 236181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241094:-1
position: 241094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236181-241094:-1:exon

PARK7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PARK7
product: Parkinsonism associated deglycase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003212178.2
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(236181..236612,237415..237501,239018..239087,239576..239635,240223..240324,240988..241094))
location: region:236181-241094:-1
so has part: feature:240988-241094:-1:exon
so has part: feature:240223-240324:-1:exon
so has part: feature:239576-239635:-1:exon
so has part: feature:239018-239087:-1:exon
so has part: feature:237415-237501:-1:exon
so has part: feature:236181-236612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:240988-241094:-1:exon

position:240988:-1
position: 240988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:240223-240324:-1:exon

position:240223:-1
position: 240223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240324:-1
position: 240324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239576-239635:-1:exon

position:239576:-1
position: 239576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239635:-1
position: 239635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:239018-239087:-1:exon

position:239018:-1
position: 239018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239087:-1
position: 239087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:237415-237501:-1:exon

position:237415:-1
position: 237415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237501:-1
position: 237501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:236181-236612:-1:exon

position:236612:-1
position: 236612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PARK7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PARK7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein/nucleic acid deglycase DJ-1
translation: MASKRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKEPVQCSRDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGPTALLAHGIGFGSKVTTHPLAKDKMMNGAHYCYSESRVEKDGNILTSRGPGTSFEFGLAIVEALMGKEVAEQVKAPLILKD
SIO_010081: PARK7
subclass of: SO_0000673
so part of: PARK7
location: complement(join(236452..236612,237415..237501,239018..239087,239576..239635,240223..240324,240988..241077))
location: region:236452-241077:-1
so has part: feature:240988-241077:-1:exon
so has part: feature:240223-240324:-1:exon
so has part: feature:239576-239635:-1:exon
so has part: feature:239018-239087:-1:exon
so has part: feature:237415-237501:-1:exon
so has part: feature:236452-236612:-1:exon

XP_003212226.1
type: Protein
SIO_000068: ncbiprotein

position:236452:-1
position: 236452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:241077:-1
position: 241077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:240988-241077:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:240223-240324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239576-239635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239018-239087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:237415-237501:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:236452-236612:-1:exon

LOC109370848
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(242969..243499)
location: region:242969-243499:-1
so has part: feature:242969-243499:-1:exon
subclass of: SO_0000010

109370848
type: Gene
SIO_000068: ncbigene

position:242969:-1
position: 242969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243499:-1
position: 243499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242969-243499:-1:exon

LOC109370848
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109370848
product: protein-arginine deiminase type-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_019622426.1
SIO_010081: LOC109370848
subclass of: SO_0000673
so part of: LOC109370848
location: complement(join(242969..243278,243377..243499))
location: region:242969-243499:-1
so has part: feature:243377-243499:-1:exon
so has part: feature:242969-243278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243377-243499:-1:exon

position:243377:-1
position: 243377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:242969-243278:-1:exon

position:243278:-1
position: 243278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109370848
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109370848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-arginine deiminase type-4-like
translation: MVNMLVLGRHLGIPKPFGPLVAGQCCLEERVRALLQPLGLSCTFINDFFSYHVLSGDVHCGTNVRRKPLAVKWWHVVP
SIO_010081: LOC109370848
subclass of: SO_0000673
so part of: LOC109370848
location: complement(join(243045..243278,243377..243379))
location: region:243045-243379:-1
so has part: feature:243377-243379:-1:exon
so has part: feature:243045-243278:-1:exon

XP_019477971.1
type: Protein
SIO_000068: ncbiprotein

position:243045:-1
position: 243045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243379:-1
position: 243379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243377-243379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:243045-243278:-1:exon

TNFRSF9
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TNFRSF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <243609..248872
location: region:243609-248872:1
so has part: feature:243609-248872:1:exon
subclass of: SO_0000010

104914113
type: Gene
SIO_000068: ncbigene

position:243609:1
position: 243609
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:248872:1
position: 248872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243609-248872:1:exon

TNFRSF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TNFRSF9
product: TNF receptor superfamily member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_019622386.2
SIO_010081: TNFRSF9
subclass of: SO_0000673
so part of: TNFRSF9
location: join(<243609..243765,244430..244567,245205..245271,245348..245484,245707..245841,247537..248872)
location: region:243609-248872:1
so has part: feature:243609-243765:1:exon
so has part: feature:244430-244567:1:exon
so has part: feature:245205-245271:1:exon
so has part: feature:245348-245484:1:exon
so has part: feature:245707-245841:1:exon
so has part: feature:247537-248872:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:243609-243765:1:exon

position:243765:1
position: 243765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:244430-244567:1:exon

position:244430:1
position: 244430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244567:1
position: 244567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:245205-245271:1:exon

position:245205:1
position: 245205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245271:1
position: 245271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:245348-245484:1:exon

position:245348:1
position: 245348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245484:1
position: 245484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:245707-245841:1:exon

position:245707:1
position: 245707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245841:1
position: 245841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:247537-248872:1:exon

position:247537:1
position: 247537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TNFRSF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 9
translation: SAALLYSLRVSPAGTFVAGAGCGRGASCQQCPSDTFSSVAGARSCSLCRKCEGRFKYLKVCSPISDAECTCKEGYRCSDDGCSRCDRSCGLGKERTGSGCQACPYGTFNDQTDGSCKNWTACSENQVLQPGTATKDAVCKHSSDNPTLATTSPTTSPAVPFPIAVPGKDLQMDIIRISLAVAGLLCIAFLLPLCVCLSVWQKKKLHAVFKKMQTTPEQSIQEETCSCRFPEEEQGEDQDCGKSTEFRDLLEN
SIO_010081: TNFRSF9
subclass of: SO_0000673
so part of: TNFRSF9
location: join(<243609..243765,244430..244567,245205..245271,245348..245484,245707..245841,247537..247661)
location: region:243609-247661:1
so has part: feature:243609-243765:1:exon
so has part: feature:244430-244567:1:exon
so has part: feature:245205-245271:1:exon
so has part: feature:245348-245484:1:exon
so has part: feature:245707-245841:1:exon
so has part: feature:247537-247661:1:exon

XP_019477931.1
type: Protein
SIO_000068: ncbiprotein

position:247661:1
position: 247661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:243609-243765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:244430-244567:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:245205-245271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245348-245484:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245707-245841:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:247537-247661:1:exon

UTS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: UTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 256950..260402
location: region:256950-260402:1
so has part: feature:256950-260402:1:exon
subclass of: SO_0000010

100544733
type: Gene
SIO_000068: ncbigene

position:256950:1
position: 256950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260402:1
position: 260402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256950-260402:1:exon

UTS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UTS2
product: urotensin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003212179.4
SIO_010081: UTS2
subclass of: SO_0000673
so part of: UTS2
location: join(256950..257419,259482..259592,259716..259759,260286..260402)
location: region:256950-260402:1
so has part: feature:256950-257419:1:exon
so has part: feature:259482-259592:1:exon
so has part: feature:259716-259759:1:exon
so has part: feature:260286-260402:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:256950-257419:1:exon

position:257419:1
position: 257419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259482-259592:1:exon

position:259482:1
position: 259482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259592:1
position: 259592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:259716-259759:1:exon

position:259716:1
position: 259716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259759:1
position: 259759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:260286-260402:1:exon

position:260286:1
position: 260286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UTS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UTS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: urotensin-2
translation: MHKLVFCCLIIISFSCPLFSLPVINASEMSYQLPADEDSRLNLEQLGSSESTSLPQFLQELLGTLVEDNKAGLTSSSYSPRKNIEEAFYGNHPRIALLGRLLMKDRKQYKKRGNLSECFWKYCV
SIO_010081: UTS2
subclass of: SO_0000673
so part of: UTS2
location: join(257317..257419,259482..259592,259716..259759,260286..260402)
location: region:257317-260402:1
so has part: feature:257317-257419:1:exon
so has part: feature:259482-259592:1:exon
so has part: feature:259716-259759:1:exon
so has part: feature:260286-260402:1:exon

XP_003212227.1
type: Protein
SIO_000068: ncbiprotein

position:257317:1
position: 257317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257317-257419:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259482-259592:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:259716-259759:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260286-260402:1:exon

PER3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(264903..281529)
location: region:264903-281529:-1
so has part: feature:264903-281529:-1:exon
subclass of: SO_0000010

100008578
type: Gene
SIO_000068: ncbigene

position:264903:-1
position: 264903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281529:-1
position: 281529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264903-281529:-1:exon

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PER3
product: period circadian regulator 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_019622424.2
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(264903..265664,265992..266142,266686..266803,267463..267643,268684..269420,269967..270215,270747..270911,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281528))
location: region:264903-281528:-1
so has part: feature:280984-281528:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270911:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266803:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:264903-265664:-1:exon

position:281528:-1
position: 281528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281528:-1:exon

position:280984:-1
position: 280984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

position:280309:-1
position: 280309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280424:-1
position: 280424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

position:279251:-1
position: 279251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279452:-1
position: 279452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

position:278095:-1
position: 278095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278143:-1
position: 278143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

position:276597:-1
position: 276597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276739:-1
position: 276739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

position:276150:-1
position: 276150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276228:-1
position: 276228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

position:275314:-1
position: 275314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275420:-1
position: 275420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

position:274948:-1
position: 274948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275104:-1
position: 275104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

position:273927:-1
position: 273927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274032:-1
position: 274032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

position:273396:-1
position: 273396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273521:-1
position: 273521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

position:272536:-1
position: 272536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272662:-1
position: 272662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

position:272132:-1
position: 272132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272276:-1
position: 272276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

position:271403:-1
position: 271403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271515:-1
position: 271515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270911:-1:exon

position:270747:-1
position: 270747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270911:-1
position: 270911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

position:269967:-1
position: 269967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270215:-1
position: 270215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

position:268684:-1
position: 268684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269420:-1
position: 269420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

position:267463:-1
position: 267463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:267643:-1
position: 267643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266803:-1:exon

position:266686:-1
position: 266686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266803:-1
position: 266803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

position:265992:-1
position: 265992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266142:-1
position: 266142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:264903-265664:-1:exon

position:265664:-1
position: 265664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PER3
product: period circadian regulator 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_019622421.2
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(264903..265664,265992..266142,266686..266866,267463..267643,268684..269420,269967..270215,270747..270911,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281528))
location: region:264903-281528:-1
so has part: feature:280984-281528:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270911:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266866:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:264903-265664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281528:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270911:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266866:-1:exon

position:266866:-1
position: 266866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:264903-265664:-1:exon

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PER3
product: period circadian regulator 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_019622422.2
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(264903..265664,265992..266142,266686..266803,267463..267643,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281528))
location: region:264903-281528:-1
so has part: feature:280984-281528:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266803:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:264903-265664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281528:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

position:270950:-1
position: 270950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266803:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:264903-265664:-1:exon

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PER3
product: period circadian regulator 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_019622420.2
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(264903..265664,265992..266142,266686..266863,267463..267643,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281528))
location: region:264903-281528:-1
so has part: feature:280984-281528:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266863:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:264903-265664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281528:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266863:-1:exon

position:266863:-1
position: 266863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:264903-265664:-1:exon

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PER3
product: period circadian regulator 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_019622419.2
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(264903..265397,265534..265664,265992..266142,266686..266866,267463..267643,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281528))
location: region:264903-281528:-1
so has part: feature:280984-281528:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266866:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:265534-265664:-1:exon
so has part: feature:264903-265397:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281528:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265534-265664:-1:exon

position:265534:-1
position: 265534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:264903-265397:-1:exon

position:265397:-1
position: 265397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PER3
product: period circadian regulator 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 110 samples with support for all annotated introns
transcript id: XM_010722689.3
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(264903..265664,265992..266142,266686..266866,267463..267643,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281528))
location: region:264903-281528:-1
so has part: feature:280984-281528:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266866:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:264903-265664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281528:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:264903-265664:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X5
translation: MSFRAFPPVPWIGRNMGVVLWGGISCSRSPQQSSTSVLISDRLDWGQSHKDLMVMIQEIKKCLPEEKRSSSKPSTISALNYALRCVQQVRANNEFFQALSDRRVFQMDVMTYSIEELVTVASEHTPKNNDTFVAVFSLLSGRILHISEQAASILNHKKKVLESSRFVELLAPQDASVFYAHTDQSHLPLWYTESQTASLYDYAQVKSFFCRIRGGKDQEQEMHWYPFRITPYLVHVCTSVHVDAESCCLALAEKIHSGYEAPRIPMDKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSILMYLHPEDRPLMITIHRKILKFAGQPPFEYLPIRFCTQNGDYVILDTSWSSFVNPWSRKVAFIIGRHRVRTSPLNEDVFATRGQETSSVEKEIKELQGQIYKLLLQPVHSNVSSGYGSLGSSGSYEHYISVASSSDSNGNCAEETQEPVTLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQPMGSEVLEGKRHSASCFLPTLRSDSTEELGNALYDDSKKTPHVPSYQQINCVDSIIRYLESCSVPVLKRKSKSSTNTSSSSDGDKKNQEIGALGVFADQEEMLKKQTNEGIVGAPLPDLTLSNKSLSVGSASSQCSYSSTIVHVPHPESEVTTMENAHVGNEHVELPLNAQNPVTVAEELKPVGLTKEALSVHTQKEEQNYVDRFRRRILLSPFRTCLQWDSRSNNGHSYDQGNSPSKEMTPTSCKNGKKGKFKHWKPQRQSSDRRSRSKNRNSFPCEKRRIQKQSLSPSEMSCLRSSSTNCFPPVGFPVYSDALSSFQASSIGEELAIYSTKPEPTSLSQLCCGAPSIPALSPPNMGMFMAAFFHNFPIYAQMPQYAFLPSPQNVYLPSSYPCTTLPPAPPPSAPSAIAPVSVGQSYPAFSAASTEEQPEGQHGWALQLSSSRSSSPLQLNLLQEELPESAEPLVNADVKVYAEAKCDNSREDSGNSASSHCASCECTDRLLREDSQSGAGSAASGSGLALSSSLGSHSCETSGGGTDTNQEAKEKQTSHKSKHESAWVTMDRTPEQVLMTYQMPNRIKEEVLKEDMEKLIVMRQQQPWFSDRQKRELAEVHTWLQTQTVPLQINIQGCVTCDIREATCEAAMADDNMENKGKPFPVLEH
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(265563..265664,265992..266142,266686..266803,267463..267643,268684..269420,269967..270215,270747..270911,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281254))
location: region:265563-281254:-1
so has part: feature:280984-281254:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270911:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266803:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:265563-265664:-1:exon

XP_019477969.1
type: Protein
SIO_000068: ncbiprotein

position:265563:-1
position: 265563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281254:-1
position: 281254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270911:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266803:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265563-265664:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X3
translation: MSFRAFPPVPWIGRNMGVVLWGGISCSRSPQQSSTSVLISDRLDWGQSHKDLMVMIQEIKKCLPEEKRSSSKPSTISALNYALRCVQQVRANNEFFQALSDRRVFQMDVMTYSIEELVTVASEHTPKNNDTFVAVFSLLSGRILHISEQAASILNHKKKVLESSRFVELLAPQDASVFYAHTDQSHLPLWYTESQTASLYDYAQVKSFFCRIRGGKDQEQEMHWYPFRITPYLVHVCTSVHVDAESCCLALAEKIHSGYEAPRIPMDKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSILMYLHPEDRPLMITIHRKILKFAGQPPFEYLPIRFCTQNGDYVILDTSWSSFVNPWSRKVAFIIGRHRVRTSPLNEDVFATRGQETSSVEKEIKELQGQIYKLLLQPVHSNVSSGYGSLGSSGSYEHYISVASSSDSNGNCAEETQEPVTLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQPMGSEVLEGKRHSASCFLPTLRSDSTEELGNALYDDSKKTPHVPSYQQINCVDSIIRYLESCSVPVLKRKSKSSTNTSSSSDGDKKNQEIGALGVFADQEEMLKKQTNEGIVGAPLPDLTLSNKSLSVGSASSQCSYSSTIVHVPHPESEVTTMENAHVGNEHVELPLNAQNPVTVAEELKPVGLTKEALSVHTQKEEQNYVDRFRRRILLSPFRTCLQWDSRSNNGHSYDQGNSPSKEMTPTSCKNGKKGKFKHWKPQRQSSDRRSRSKNRNSFPCEKRRIQKQSLSPSEMSCLRSSSTNCFPPVGFPVYSDALSSFQASSIGEELAIYSTKPEPTSLSQLCCGAPSIPALSPPNMGMFMAAFFHNFPIYAQMPQYAFLPSPQNVYLPSSYPCTTLPPAPPPSAPSAIAPVSVGQSYPAFSAASTEEQPEGQHGWALQLSSSRSSSPLQLNLLQEELPESAEPLVNADVKVYAEAKCDNSREDSGNSASSHCASCECTDRLLREDSQSGAGSAASGSGLALSSSLGSHSCETSGGGTAGSRKSSKYFASNDSSETSKTDTNQEAKEKQTSHKSKHESAWVTMDRTPEQVLMTYQMPNRIKEEVLKEDMEKLIVMRQQQPWFSDRQKRELAEVHTWLQTQTVPLQINIQGCVTCDIREATCEAAMADDNMENKGKPFPVLEH
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(265563..265664,265992..266142,266686..266866,267463..267643,268684..269420,269967..270215,270747..270911,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281254))
location: region:265563-281254:-1
so has part: feature:280984-281254:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270911:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266866:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:265563-265664:-1:exon

XP_019477966.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270911:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265563-265664:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X4
translation: MSFRAFPPVPWIGRNMGVVLWGGISCSRSPQQSSTSVLISDRLDWGQSHKDLMVMIQEIKKCLPEEKRSSSKPSTISALNYALRCVQQVRANNEFFQALSDRRVFQMDVMTYSIEELVTVASEHTPKNNDTFVAVFSLLSGRILHISEQAASILNHKKKVLESSRFVELLAPQDASVFYAHTDQSHLPLWYTESQTASLYDYAQVKSFFCRIRGGKDQEQEMHWYPFRITPYLVHVCTSVHVDAESCCLALAEKIHSGYEAPRIPMDKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSILMYLHPEDRPLMITIHRKILKFAGQPPFEYLPIRFCTQNGDYVILDTSWSSFVNPWSRKVAFIIGRHRVRTSPLNEDVFATRGQETSSVEKEIKELQGQIYKLLLQPVHSNVSSGYGSLGSSGSYEHYISVASSSDSNGNCAEETQEPVTLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQPMGSEVLEGKRHSASCFLPTLRSDSTEELGNALYDDSKKTPHVPSYQQINCVDSIIRYLESCSVPVLKRKSKSSTNTSSSSDGDKKNQEIGALGDTAVLSSINSQTPVFADQEEMLKKQTNEGIVGAPLPDLTLSNKSLSVGSASSQCSYSSTIVHVPHPESEVTTMENAHVGNEHVELPLNAQNPVTVAEELKPVGLTKEALSVHTQKEEQNYVDRFRRRILLSPFRTCLQWDSRSNNGHSYDQGNSPSKEMTPTSCKNGKKGKFKHWKPQRQSSDRRSRSKNRNSFPCEKRRIQKQSLSPSEMSCLRSSSTNCFPPVGFPVYSDALSSFQASSIGEELAIYSTKPEPTSLSQLCCGAPSIPALSPPNMGMFMAAFFHNFPIYAQMPQYAFLPSPQNVYLPSSYPCTTLPPAPPPSAPSAIAPVSVGQSYPAFSAASTEEQPEGQHGWALQLSSSRSSSPLQLNLLQEELPESAEPLVNADVKVYAEAKCDNSREDSGNSASSHCASCECTDRLLREDSQSGAGSAASGSGLALSSSLGSHSCETSGGGTDTNQEAKEKQTSHKSKHESAWVTMDRTPEQVLMTYQMPNRIKEEVLKEDMEKLIVMRQQQPWFSDRQKRELAEVHTWLQTQTVPLQINIQGCVTCDIREATCEAAMADDNMENKGKPFPVLEH
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(265563..265664,265992..266142,266686..266803,267463..267643,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281254))
location: region:265563-281254:-1
so has part: feature:280984-281254:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266803:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:265563-265664:-1:exon

XP_019477967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266803:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265563-265664:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X2
translation: MSFRAFPPVPWIGRNMGVVLWGGISCSRSPQQSSTSVLISDRLDWGQSHKDLMVMIQEIKKCLPEEKRSSSKPSTISALNYALRCVQQVRANNEFFQALSDRRVFQMDVMTYSIEELVTVASEHTPKNNDTFVAVFSLLSGRILHISEQAASILNHKKKVLESSRFVELLAPQDASVFYAHTDQSHLPLWYTESQTASLYDYAQVKSFFCRIRGGKDQEQEMHWYPFRITPYLVHVCTSVHVDAESCCLALAEKIHSGYEAPRIPMDKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSILMYLHPEDRPLMITIHRKILKFAGQPPFEYLPIRFCTQNGDYVILDTSWSSFVNPWSRKVAFIIGRHRVRTSPLNEDVFATRGQETSSVEKEIKELQGQIYKLLLQPVHSNVSSGYGSLGSSGSYEHYISVASSSDSNGNCAEETQEPVTLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQPMGSEVLEGKRHSASCFLPTLRSDSTEELGNALYDDSKKTPHVPSYQQINCVDSIIRYLESCSVPVLKRKSKSSTNTSSSSDGDKKNQEIGALGDTAVLSSINSQTPVFADQEEMLKKQTNEGIVGAPLPDLTLSNKSLSVGSASSQCSYSSTIVHVPHPESEVTTMENAHVGNEHVELPLNAQNPVTVAEELKPVGLTKEALSVHTQKEEQNYVDRFRRRILLSPFRTCLQWDSRSNNGHSYDQGNSPSKEMTPTSCKNGKKGKFKHWKPQRQSSDRRSRSKNRNSFPCEKRRIQKQSLSPSEMSCLRSSSTNCFPPVGFPVYSDALSSFQASSIGEELAIYSTKPEPTSLSQLCCGAPSIPALSPPNMGMFMAAFFHNFPIYAQMPQYAFLPSPQNVYLPSSYPCTTLPPAPPPSAPSAIAPVSVGQSYPAFSAASTEEQPEGQHGWALQLSSSRSSSPLQLNLLQEELPESAEPLVNADVKVYAEAKCDNSREDSGNSASSHCASCECTDRLLREDSQSGAGSAASGSGLALSSSLGSHSCETSGGGTGSRKSSKYFASNDSSETSKTDTNQEAKEKQTSHKSKHESAWVTMDRTPEQVLMTYQMPNRIKEEVLKEDMEKLIVMRQQQPWFSDRQKRELAEVHTWLQTQTVPLQINIQGCVTCDIREATCEAAMADDNMENKGKPFPVLEH
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(265563..265664,265992..266142,266686..266863,267463..267643,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281254))
location: region:265563-281254:-1
so has part: feature:280984-281254:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266863:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:265563-265664:-1:exon

XP_019477965.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266863:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265563-265664:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X1
translation: MSFRAFPPVPWIGRNMGVVLWGGISCSRSPQQSSTSVLISDRLDWGQSHKDLMVMIQEIKKCLPEEKRSSSKPSTISALNYALRCVQQVRANNEFFQALSDRRVFQMDVMTYSIEELVTVASEHTPKNNDTFVAVFSLLSGRILHISEQAASILNHKKKVLESSRFVELLAPQDASVFYAHTDQSHLPLWYTESQTASLYDYAQVKSFFCRIRGGKDQEQEMHWYPFRITPYLVHVCTSVHVDAESCCLALAEKIHSGYEAPRIPMDKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSILMYLHPEDRPLMITIHRKILKFAGQPPFEYLPIRFCTQNGDYVILDTSWSSFVNPWSRKVAFIIGRHRVRTSPLNEDVFATRGQETSSVEKEIKELQGQIYKLLLQPVHSNVSSGYGSLGSSGSYEHYISVASSSDSNGNCAEETQEPVTLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQPMGSEVLEGKRHSASCFLPTLRSDSTEELGNALYDDSKKTPHVPSYQQINCVDSIIRYLESCSVPVLKRKSKSSTNTSSSSDGDKKNQEIGALGDTAVLSSINSQTPVFADQEEMLKKQTNEGIVGAPLPDLTLSNKSLSVGSASSQCSYSSTIVHVPHPESEVTTMENAHVGNEHVELPLNAQNPVTVAEELKPVGLTKEALSVHTQKEEQNYVDRFRRRILLSPFRTCLQWDSRSNNGHSYDQGNSPSKEMTPTSCKNGKKGKFKHWKPQRQSSDRRSRSKNRNSFPCEKRRIQKQSLSPSEMSCLRSSSTNCFPPVGFPVYSDALSSFQASSIGEELAIYSTKPEPTSLSQLCCGAPSIPALSPPNMGMFMAAFFHNFPIYAQMPQYAFLPSPQNVYLPSSYPCTTLPPAPPPSAPSAIAPVSVGQSYPAFSAASTEEQPEGQHGWALQLSSSRSSSPLQLNLLQEELPESAEPLVNADVKVYAEAKCDNSREDSGNSASSHCASCECTDRLLREDSQSGAGSAASGSGLALSSSLGSHSCETSGGGTAGSRKSSKYFASNDSSETSKTDTNQEAKEKQTSHKSKHESAWVTMDRTPEQVLMTYQMPNRIKEEVLKEDMEKLIVMRQQQPWFSDRQKRELAEVHTWLQTQTVPLQINIQGCVTCDIREATCEAAMADDNMENKGKPFPVLEH
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(265563..265664,265992..266142,266686..266866,267463..267643,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281254))
location: region:265563-281254:-1
so has part: feature:280984-281254:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266866:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:265563-265664:-1:exon

XP_019477964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265563-265664:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X1
translation: MSFRAFPPVPWIGRNMGVVLWGGISCSRSPQQSSTSVLISDRLDWGQSHKDLMVMIQEIKKCLPEEKRSSSKPSTISALNYALRCVQQVRANNEFFQALSDRRVFQMDVMTYSIEELVTVASEHTPKNNDTFVAVFSLLSGRILHISEQAASILNHKKKVLESSRFVELLAPQDASVFYAHTDQSHLPLWYTESQTASLYDYAQVKSFFCRIRGGKDQEQEMHWYPFRITPYLVHVCTSVHVDAESCCLALAEKIHSGYEAPRIPMDKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSILMYLHPEDRPLMITIHRKILKFAGQPPFEYLPIRFCTQNGDYVILDTSWSSFVNPWSRKVAFIIGRHRVRTSPLNEDVFATRGQETSSVEKEIKELQGQIYKLLLQPVHSNVSSGYGSLGSSGSYEHYISVASSSDSNGNCAEETQEPVTLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQPMGSEVLEGKRHSASCFLPTLRSDSTEELGNALYDDSKKTPHVPSYQQINCVDSIIRYLESCSVPVLKRKSKSSTNTSSSSDGDKKNQEIGALGDTAVLSSINSQTPVFADQEEMLKKQTNEGIVGAPLPDLTLSNKSLSVGSASSQCSYSSTIVHVPHPESEVTTMENAHVGNEHVELPLNAQNPVTVAEELKPVGLTKEALSVHTQKEEQNYVDRFRRRILLSPFRTCLQWDSRSNNGHSYDQGNSPSKEMTPTSCKNGKKGKFKHWKPQRQSSDRRSRSKNRNSFPCEKRRIQKQSLSPSEMSCLRSSSTNCFPPVGFPVYSDALSSFQASSIGEELAIYSTKPEPTSLSQLCCGAPSIPALSPPNMGMFMAAFFHNFPIYAQMPQYAFLPSPQNVYLPSSYPCTTLPPAPPPSAPSAIAPVSVGQSYPAFSAASTEEQPEGQHGWALQLSSSRSSSPLQLNLLQEELPESAEPLVNADVKVYAEAKCDNSREDSGNSASSHCASCECTDRLLREDSQSGAGSAASGSGLALSSSLGSHSCETSGGGTAGSRKSSKYFASNDSSETSKTDTNQEAKEKQTSHKSKHESAWVTMDRTPEQVLMTYQMPNRIKEEVLKEDMEKLIVMRQQQPWFSDRQKRELAEVHTWLQTQTVPLQINIQGCVTCDIREATCEAAMADDNMENKGKPFPVLEH
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(265563..265664,265992..266142,266686..266866,267463..267643,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281254))
location: region:265563-281254:-1
so has part: feature:280984-281254:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267463-267643:-1:exon
so has part: feature:266686-266866:-1:exon
so has part: feature:265992-266142:-1:exon
so has part: feature:265563-265664:-1:exon

XP_010720991.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267463-267643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266686-266866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:265992-266142:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:265563-265664:-1:exon

PER3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: PER3
product: period circadian regulator 3, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002121300.2
SIO_010081: PER3
so part of: PER3
location: complement(join(266008..266142,266686..266866,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281529))
location: region:266008-281529:-1
so has part: feature:280984-281529:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:266686-266866:-1:exon
so has part: feature:266008-266142:-1:exon

position:266008:-1
position: 266008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:266686-266866:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:266008-266142:-1:exon

PER3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: PER3
product: period circadian regulator 3, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XR_002121301.2
SIO_010081: PER3
so part of: PER3
location: complement(join(267509..267643,268078..268259,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281529))
location: region:267509-281529:-1
so has part: feature:280984-281529:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:268078-268259:-1:exon
so has part: feature:267509-267643:-1:exon

position:267509:-1
position: 267509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:268078-268259:-1:exon

position:268078:-1
position: 268078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268259:-1
position: 268259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:267509-267643:-1:exon

PER3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: PER3
product: period circadian regulator 3, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_002121302.2
SIO_010081: PER3
so part of: PER3
location: complement(join(267522..267984,268078..268259,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281529))
location: region:267522-281529:-1
so has part: feature:280984-281529:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:268078-268259:-1:exon
so has part: feature:267522-267984:-1:exon

position:267522:-1
position: 267522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:268078-268259:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267522-267984:-1:exon

position:267984:-1
position: 267984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PER3
product: period circadian regulator 3, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_019622425.2
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(267522..268259,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281529))
location: region:267522-281529:-1
so has part: feature:280984-281529:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:267522-268259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:267522-268259:-1:exon

PER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: period circadian protein homolog 3 isoform X6
translation: MSFRAFPPVPWIGRNMGVVLWGGISCSRSPQQSSTSVLISDRLDWGQSHKDLMVMIQEIKKCLPEEKRSSSKPSTISALNYALRCVQQVRANNEFFQALSDRRVFQMDVMTYSIEELVTVASEHTPKNNDTFVAVFSLLSGRILHISEQAASILNHKKKVLESSRFVELLAPQDASVFYAHTDQSHLPLWYTESQTASLYDYAQVKSFFCRIRGGKDQEQEMHWYPFRITPYLVHVCTSVHVDAESCCLALAEKIHSGYEAPRIPMDKRIFTTTHTPGCVFLEIDDRAVPLLGYLPQDLIGTSILMYLHPEDRPLMITIHRKILKFAGQPPFEYLPIRFCTQNGDYVILDTSWSSFVNPWSRKVAFIIGRHRVRTSPLNEDVFATRGQETSSVEKEIKELQGQIYKLLLQPVHSNVSSGYGSLGSSGSYEHYISVASSSDSNGNCAEETQEPVTLQQVCADVNRIKNLGQQLYIASRSKPQNGNEQPMGSEVLEGKRHSASCFLPTLRSDSTEELGNALYDDSKKTPHVPSYQQINCVDSIIRYLESCSVPVLKRKSKSSTNTSSSSDGDKKNQEIGALGDTAVLSSINSQTPVFADQEEMLKKQTNEGIVGAPLPDLTLSNKSLSVGSASSQCSYSSTIVHVPHPESEVTTMENAHVGNEHVELPLNAQNPVTVAEELKPVGLTKEALSVHTQKEEQNYVDRFRRRILLSPFRTCLQWDSRSNNGHSYDQGNSPSKEMTPTSCKNGKKGKFKHWKPQRQSSDRRSRSKNRNSFPCEKRRIQKQSLSPSEMSCLRSSSTNCFPPVGFPVYSDALSSFQASSIGEELAIYSTKPEPTSLSQLCCGAPSIPALSPPNMGMFMAAFFHNFPIYAQMPQYAFLPSPQNVYLPSSYPCTTLPPAPPPSAPSAIAPVSVGQSYPAFSAASTEEQPEGQHGWALQLSSSRSSSPLQLNLLQEELPESAEPLVNADVKVYAEAKCGCS
SIO_010081: PER3
subclass of: SO_0000673
so part of: PER3
location: complement(join(268248..268259,268684..269420,269967..270215,270747..270950,271403..271515,272132..272276,272536..272662,273396..273521,273927..274032,274948..275104,275314..275420,276150..276228,276597..276739,278095..278143,279251..279452,280309..280424,280984..281254))
location: region:268248-281254:-1
so has part: feature:280984-281254:-1:exon
so has part: feature:280309-280424:-1:exon
so has part: feature:279251-279452:-1:exon
so has part: feature:278095-278143:-1:exon
so has part: feature:276597-276739:-1:exon
so has part: feature:276150-276228:-1:exon
so has part: feature:275314-275420:-1:exon
so has part: feature:274948-275104:-1:exon
so has part: feature:273927-274032:-1:exon
so has part: feature:273396-273521:-1:exon
so has part: feature:272536-272662:-1:exon
so has part: feature:272132-272276:-1:exon
so has part: feature:271403-271515:-1:exon
so has part: feature:270747-270950:-1:exon
so has part: feature:269967-270215:-1:exon
so has part: feature:268684-269420:-1:exon
so has part: feature:268248-268259:-1:exon

XP_019477970.1
type: Protein
SIO_000068: ncbiprotein

position:268248:-1
position: 268248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280984-281254:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280309-280424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279251-279452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278095-278143:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:276597-276739:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:276150-276228:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:275314-275420:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:274948-275104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273927-274032:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273396-273521:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272536-272662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272132-272276:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271403-271515:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270747-270950:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269967-270215:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268684-269420:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:268248-268259:-1:exon

VAMP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: VAMP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(282114..>284373)
location: region:282114-284373:-1
so has part: feature:282114-284373:-1:exon
subclass of: SO_0000010

100546373
type: Gene
SIO_000068: ncbigene

position:282114:-1
position: 282114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284373:-1
position: 284373
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:282114-284373:-1:exon

VAMP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: VAMP3
product: vesicle associated membrane protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010722723.3
SIO_010081: VAMP3
subclass of: SO_0000673
so part of: VAMP3
location: complement(join(282114..282261,282629..282680,283335..283493,284140..>284373))
location: region:282114-284373:-1
so has part: feature:284140-284373:-1:exon
so has part: feature:283335-283493:-1:exon
so has part: feature:282629-282680:-1:exon
so has part: feature:282114-282261:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284140-284373:-1:exon

position:284140:-1
position: 284140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283335-283493:-1:exon

position:283335:-1
position: 283335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283493:-1
position: 283493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282629-282680:-1:exon

position:282629:-1
position: 282629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282680:-1
position: 282680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:282114-282261:-1:exon

position:282261:-1
position: 282261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VAMP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: VAMP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein 3
translation: NNRREVSFPFGKAKFPAFRKVRSLVCCKHVNLKAKSLRETKQNIDGFLYCRSANVPGNTNVPAGSNRRLQQTQHQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNCKMWAILIAVVVIIIIIIIVLSVPK
SIO_010081: VAMP3
subclass of: SO_0000673
so part of: VAMP3
location: complement(join(282242..282261,282629..282680,283335..283493,284140..>284373))
location: region:282242-284373:-1
so has part: feature:284140-284373:-1:exon
so has part: feature:283335-283493:-1:exon
so has part: feature:282629-282680:-1:exon
so has part: feature:282242-282261:-1:exon

XP_010721025.2
type: Protein
SIO_000068: ncbiprotein

position:282242:-1
position: 282242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284140-284373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283335-283493:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282629-282680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:282242-282261:-1:exon

CAMTA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(286363..512110)
location: region:286363-512110:-1
so has part: feature:286363-512110:-1:exon
subclass of: SO_0000010

100546524
type: Gene
SIO_000068: ncbigene

position:286363:-1
position: 286363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512110:-1
position: 512110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286363-512110:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019622429.2
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(286363..287691,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510699,512089..512110))
location: region:286363-512110:-1
so has part: feature:512089-512110:-1:exon
so has part: feature:510606-510699:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:286363-287691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512089-512110:-1:exon

position:512089:-1
position: 512089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510606-510699:-1:exon

position:510606:-1
position: 510606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510699:-1
position: 510699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:490062-490180:-1:exon

position:490062:-1
position: 490062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490180:-1
position: 490180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:448563-448630:-1:exon

position:448563:-1
position: 448563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448630:-1
position: 448630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:422846-422981:-1:exon

position:422846:-1
position: 422846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:422981:-1
position: 422981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:370380-370451:-1:exon

position:370380:-1
position: 370380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370451:-1
position: 370451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:326542-326695:-1:exon

position:326542:-1
position: 326542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:326695:-1
position: 326695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:320613-320753:-1:exon

position:320613:-1
position: 320613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320753:-1
position: 320753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:316951-318806:-1:exon

position:316951:-1
position: 316951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318806:-1
position: 318806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:315712-315838:-1:exon

position:315712:-1
position: 315712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315838:-1
position: 315838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:315192-315326:-1:exon

position:315192:-1
position: 315192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315326:-1
position: 315326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:305783-305922:-1:exon

position:305783:-1
position: 305783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305922:-1
position: 305922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:305337-305533:-1:exon

position:305337:-1
position: 305337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305533:-1
position: 305533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:304892-304970:-1:exon

position:304892:-1
position: 304892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:304970:-1
position: 304970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:303593-303908:-1:exon

position:303593:-1
position: 303593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303908:-1
position: 303908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:302697-303220:-1:exon

position:302697:-1
position: 302697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:303220:-1
position: 303220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:302181-302368:-1:exon

position:302181:-1
position: 302181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302368:-1
position: 302368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:301536-301782:-1:exon

position:301536:-1
position: 301536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301782:-1
position: 301782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:300999-301070:-1:exon

position:300999:-1
position: 300999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301070:-1
position: 301070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:300089-300109:-1:exon

position:300089:-1
position: 300089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:300109:-1
position: 300109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:297680-297873:-1:exon

position:297680:-1
position: 297680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297873:-1
position: 297873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:297412-297486:-1:exon

position:297412:-1
position: 297412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297486:-1
position: 297486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:286363-287691:-1:exon

position:287691:-1
position: 287691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019622430.1
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(286363..287691,297412..297486,297680..297873,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510699,510889..512082))
location: region:286363-512082:-1
so has part: feature:510889-512082:-1:exon
so has part: feature:510606-510699:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:286363-287691:-1:exon

position:512082:-1
position: 512082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510889-512082:-1:exon

position:510889:-1
position: 510889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:510606-510699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:286363-287691:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019622432.1
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(286363..287691,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510699,510889..512082))
location: region:286363-512082:-1
so has part: feature:510889-512082:-1:exon
so has part: feature:510606-510699:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:286363-287691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510889-512082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510606-510699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:286363-287691:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031556623.1
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(286363..287691,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510699,510889..512082))
location: region:286363-512082:-1
so has part: feature:510889-512082:-1:exon
so has part: feature:510606-510699:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:286363-287691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510889-512082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510606-510699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:286363-287691:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019622436.2
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(286363..287691,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,343246..343506))
location: region:286363-343506:-1
so has part: feature:343246-343506:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:286363-287691:-1:exon

position:343506:-1
position: 343506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343246-343506:-1:exon

position:343246:-1
position: 343246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:286363-287691:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X2
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSRDMQQQQKYPLQFWKYHLQDFNSNVLVIAFALSWTTFNLFSKTSWNSIFCWIIGIKKRHQEEFVSCFILQEGRSD
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287463..287691,297412..297486,297680..297873,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510672))
location: region:287463-510672:-1
so has part: feature:510606-510672:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:287463-287691:-1:exon

XP_019477975.1
type: Protein
SIO_000068: ncbiprotein

position:287463:-1
position: 287463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510672:-1
position: 510672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510606-510672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:287463-287691:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X3
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLSRDMQQQQKYPLQFWKYHLQDFNSNVLVIAFALSWTTFNLFSKTSWNSIFCWIIGIKKRHQEEFVSCFILQEGRSD
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287463..287691,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510672))
location: region:287463-510672:-1
so has part: feature:510606-510672:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:287463-287691:-1:exon

XP_019477977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510606-510672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:287463-287691:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X1
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSRDMQQQQKYPLQFWKYHLQDFNSNVLVIAFALSWTTFNLFSKTSWNSIFCWIIGIKKRHQEEFVSCFILQEGRSD
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287463..287691,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510672))
location: region:287463-510672:-1
so has part: feature:510606-510672:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:287463-287691:-1:exon

XP_019477974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510606-510672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:287463-287691:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X1
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSRDMQQQQKYPLQFWKYHLQDFNSNVLVIAFALSWTTFNLFSKTSWNSIFCWIIGIKKRHQEEFVSCFILQEGRSD
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287463..287691,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510672))
location: region:287463-510672:-1
so has part: feature:510606-510672:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:287463-287691:-1:exon

XP_031412483.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510606-510672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:287463-287691:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X9
translation: MFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSRDMQQQQKYPLQFWKYHLQDFNSNVLVIAFALSWTTFNLFSKTSWNSIFCWIIGIKKRHQEEFVSCFILQEGRSD
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287463..287691,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326545))
location: region:287463-326545:-1
so has part: feature:326542-326545:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:287463-287691:-1:exon

XP_019477981.1
type: Protein
SIO_000068: ncbiprotein

position:326545:-1
position: 326545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:326542-326545:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:287463-287691:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010722700.3
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287577..287792,297412..297486,297680..297873,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510699,510889..512082))
location: region:287577-512082:-1
so has part: feature:510889-512082:-1:exon
so has part: feature:510606-510699:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:287577-287792:-1:exon

position:287577:-1
position: 287577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510889-512082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510606-510699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:287577-287792:-1:exon

position:287792:-1
position: 287792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010722698.3
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287577..287792,295036..295066,297412..297486,297680..297873,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510699,510889..512082))
location: region:287577-512082:-1
so has part: feature:510889-512082:-1:exon
so has part: feature:510606-510699:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:295036-295066:-1:exon
so has part: feature:287577-287792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510889-512082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510606-510699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:295036-295066:-1:exon

position:295036:-1
position: 295036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295066:-1
position: 295066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:287577-287792:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_010722699.3
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287577..287792,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510699,510889..512082))
location: region:287577-512082:-1
so has part: feature:510889-512082:-1:exon
so has part: feature:510606-510699:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:287577-287792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510889-512082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510606-510699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:287577-287792:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_010722697.3
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287577..287792,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510699,510889..512082))
location: region:287577-512082:-1
so has part: feature:510889-512082:-1:exon
so has part: feature:510606-510699:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:287577-287792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510889-512082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510606-510699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:287577-287792:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_010722696.3
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287577..287792,295036..295066,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510699,510889..512082))
location: region:287577-512082:-1
so has part: feature:510889-512082:-1:exon
so has part: feature:510606-510699:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:295036-295066:-1:exon
so has part: feature:287577-287792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510889-512082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510606-510699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:295036-295066:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:287577-287792:-1:exon

CAMTA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAMTA1
product: calmodulin binding transcription activator 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556624.1
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287577..287792,291791..291972,295036..295066,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510699,510889..512082))
location: region:287577-512082:-1
so has part: feature:510889-512082:-1:exon
so has part: feature:510606-510699:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:295036-295066:-1:exon
so has part: feature:291791-291972:-1:exon
so has part: feature:287577-287792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:510889-512082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:510606-510699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:295036-295066:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:291791-291972:-1:exon

position:291791:-1
position: 291791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291972:-1
position: 291972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:287577-287792:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X6
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHRVKELKKAKELEDKQQHPVAM
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287729..287792,297412..297486,297680..297873,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510672))
location: region:287729-510672:-1
so has part: feature:510606-510672:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:287729-287792:-1:exon

XP_010721002.1
type: Protein
SIO_000068: ncbiprotein

position:287729:-1
position: 287729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510606-510672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:287729-287792:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X8
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLRVKELKKAKELEDKQQHPVAM
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287729..287792,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510672))
location: region:287729-510672:-1
so has part: feature:510606-510672:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:287729-287792:-1:exon

XP_010721001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510606-510672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:287729-287792:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X4
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHRVKELKKAKELEDKQQHPVAM
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287729..287792,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510672))
location: region:287729-510672:-1
so has part: feature:510606-510672:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:287729-287792:-1:exon

XP_010720999.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510606-510672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:287729-287792:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X10
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSPLVDHRLYKRGLNVFGAQMCVLNCRPRTLGCHSYWAFLSFLSCNPNEISGKRQELPFLKCPTGYFSSQSNRVKELKKAKELEDKQQHPVAM
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287729..287792,291791..291972,295036..295066,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510672))
location: region:287729-510672:-1
so has part: feature:510606-510672:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:295036-295066:-1:exon
so has part: feature:291791-291972:-1:exon
so has part: feature:287729-287792:-1:exon

XP_031412484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510606-510672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:295036-295066:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:291791-291972:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:287729-287792:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X7
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSPLVDHRLYKRSERIEKGQGT
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287760..287792,295036..295066,297412..297486,297680..297873,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510672))
location: region:287760-510672:-1
so has part: feature:510606-510672:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:295036-295066:-1:exon
so has part: feature:287760-287792:-1:exon

XP_010721000.1
type: Protein
SIO_000068: ncbiprotein

position:287760:-1
position: 287760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:510606-510672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:295036-295066:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:287760-287792:-1:exon

CAMTA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAMTA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calmodulin-binding transcription activator 1 isoform X5
translation: MMSRMPKPEMTVLLKKCWVEQKDDHGNSNGSHVKIFLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELIGQLKPMFHGIKWTCSNGNSSSGFSVEQLVQQILDSHQTKPQPRTHNCLCTGTLGAGSSVHHKCNSAKHRIISPKVEPRTGGYSTHSEVQNNDVSEGKNEHSHGKASSREKRNGKVAKPVLLHQNSTEVSSTNQVEVPDTTQNSPVSISSGLNSDPDMADSPAVTGVSSMAVASVMGSLSQSATVFMSEVTSEAVYTMSPTSGPNQHLLSSDAAAQGLVLAVSSDGHKFAFPTTASSESLSMLPSTVSEELVLSTTLDGNRKIPETTMNFDPDCFLNNPKQGQTYGGGGMKGDSISTNIRQSPTTERSFNFNTTLTKEIKTEDTSFEQQMSKEAFSSTSASNTLTLTTGSGLLPSGGGLSPSTTLEQMDFSAIDSNKDYSSSFNQTVQSPHVHQTPSPSFFLQDASKPLPLEQNTHNNLNDTSGSFVNTIGIPSVKTESPSQTTSNCNGTVETRIESTSSLQLMQFQANFQAMTAEAEVPMETSQQAEGNENLLKSGDLQACSTEHYLQPETNGGIRNGNNLPILQGNMVQGLYPVAHPSLNNSSNMELNLDHFDISFSNQFSDLINDFISVEGGSNALYGHQLVSGDSAGLSQPEDSNRTTYNQAEMCIPCCSPQQANMQLSSTENGASTMAYMHVAEVVSAAAAQGTLGLLQQSGRLFMVTDYSPEWSYPEGGVKVLITGPWQEASNNYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQIISNSVVFEYKARALPTLPSSQHDWLSLDDNQFRMSILERLEQMERRMAEMTGSQQHKQGVGGGSNGSGNGGTQVQCVSGTGTLGSCFESRVVVVCEKMMSRACWAKSKHLIHSKTFRGMTLLHLAAAQGYATLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHMDAAVVLYKWDRRAISIPDSLGRLPLAIARSRGHVKLAECLEQLQRDEQTQLGQNPRIQCPSSTDSSPENWVSQWHSELIASQEPQKGVTVISSTNTELRRPRSEPSSYYSSETQKDYPAPKKHKLSPEYFQARQEKLLSTALSLEQPSVRKQNSSSKQSTTETISPSEGIRDYGRELSQHIPEAAGYRGSGSQAGIKWNPKDIYIGVSAVQLVGSQKSPALGKDAVGHRLRQREQMNVLMLADRELVDAELLSYRDNVGDEDCLRHMDDLQVNMMTLAEHIIEATPDRIKRENFVPMESPQVERAESAAMSTTMSWLASYLADVDHLPSAAQIRNLYSEPLTPSSNTSLSPAGSPISEIAFEKPSLPSAADWSEFLSASTSEKVENEFAQLTLSDHEQRELYEAAKLVQTVFRKYKGRPLREQQEVAAAVIQRCYRKYKQLTWIALKYALYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKECGKRRQNRRTATIVQQKLRSSLLTKKQDQAARKIMRFLRRCRHSPLVDHRLYKRSERIEKGQGT
SIO_010081: CAMTA1
subclass of: SO_0000673
so part of: CAMTA1
location: complement(join(287760..287792,295036..295066,297412..297486,297680..297873,300089..300109,300999..301070,301536..301782,302181..302368,302697..303220,303593..303908,304892..304970,305337..305533,305783..305922,315192..315326,315712..315838,316951..318806,320613..320753,326542..326695,370380..370451,422846..422981,448563..448630,490062..490180,510606..510672))
location: region:287760-510672:-1
so has part: feature:510606-510672:-1:exon
so has part: feature:490062-490180:-1:exon
so has part: feature:448563-448630:-1:exon
so has part: feature:422846-422981:-1:exon
so has part: feature:370380-370451:-1:exon
so has part: feature:326542-326695:-1:exon
so has part: feature:320613-320753:-1:exon
so has part: feature:316951-318806:-1:exon
so has part: feature:315712-315838:-1:exon
so has part: feature:315192-315326:-1:exon
so has part: feature:305783-305922:-1:exon
so has part: feature:305337-305533:-1:exon
so has part: feature:304892-304970:-1:exon
so has part: feature:303593-303908:-1:exon
so has part: feature:302697-303220:-1:exon
so has part: feature:302181-302368:-1:exon
so has part: feature:301536-301782:-1:exon
so has part: feature:300999-301070:-1:exon
so has part: feature:300089-300109:-1:exon
so has part: feature:297680-297873:-1:exon
so has part: feature:297412-297486:-1:exon
so has part: feature:295036-295066:-1:exon
so has part: feature:287760-287792:-1:exon

XP_010720998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:510606-510672:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490062-490180:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448563-448630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422846-422981:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:370380-370451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:326542-326695:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:320613-320753:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:316951-318806:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:315712-315838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:315192-315326:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305783-305922:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:305337-305533:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:304892-304970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:303593-303908:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302697-303220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302181-302368:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301536-301782:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:300999-301070:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:300089-300109:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:297680-297873:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:297412-297486:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:295036-295066:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:287760-287792:-1:exon

DNAJC11
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DNAJC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 514489..530150
location: region:514489-530150:1
so has part: feature:514489-530150:1:exon
subclass of: SO_0000010

100546676
type: Gene
SIO_000068: ncbigene

position:514489:1
position: 514489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530150:1
position: 530150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514489-530150:1:exon

DNAJC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DNAJC11
product: DnaJ heat shock protein family (Hsp40) member C11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019622448.2
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(514489..514542,516848..516977,517322..517395,518582..518683,522543..522671,523364..523486,524114..524187,524439..524628,524711..524796,525204..525320,526016..526171,526456..526525,526639..526696,527354..527496,527922..528051,528635..530150)
location: region:514489-530150:1
so has part: feature:514489-514542:1:exon
so has part: feature:516848-516977:1:exon
so has part: feature:517322-517395:1:exon
so has part: feature:518582-518683:1:exon
so has part: feature:522543-522671:1:exon
so has part: feature:523364-523486:1:exon
so has part: feature:524114-524187:1:exon
so has part: feature:524439-524628:1:exon
so has part: feature:524711-524796:1:exon
so has part: feature:525204-525320:1:exon
so has part: feature:526016-526171:1:exon
so has part: feature:526456-526525:1:exon
so has part: feature:526639-526696:1:exon
so has part: feature:527354-527496:1:exon
so has part: feature:527922-528051:1:exon
so has part: feature:528635-530150:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:514489-514542:1:exon

position:514542:1
position: 514542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516848-516977:1:exon

position:516848:1
position: 516848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516977:1
position: 516977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517322-517395:1:exon

position:517322:1
position: 517322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517395:1
position: 517395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518582-518683:1:exon

position:518582:1
position: 518582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518683:1
position: 518683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:522543-522671:1:exon

position:522543:1
position: 522543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522671:1
position: 522671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:523364-523486:1:exon

position:523364:1
position: 523364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523486:1
position: 523486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:524114-524187:1:exon

position:524114:1
position: 524114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524187:1
position: 524187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:524439-524628:1:exon

position:524439:1
position: 524439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524628:1
position: 524628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:524711-524796:1:exon

position:524711:1
position: 524711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524796:1
position: 524796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:525204-525320:1:exon

position:525204:1
position: 525204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525320:1
position: 525320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:526016-526171:1:exon

position:526016:1
position: 526016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526171:1
position: 526171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:526456-526525:1:exon

position:526456:1
position: 526456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526525:1
position: 526525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:526639-526696:1:exon

position:526639:1
position: 526639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526696:1
position: 526696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:527354-527496:1:exon

position:527354:1
position: 527354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527496:1
position: 527496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:527922-528051:1:exon

position:527922:1
position: 527922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528051:1
position: 528051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:528635-530150:1:exon

position:528635:1
position: 528635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DNAJC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 11 isoform X1
translation: MKKAFIELLLPRMASQEELKAAYRRLCMLYHPDKHRDPELKLQAERLFNLVHQAYEVLSDPQTRAIYDIYGRRGLEMEGWEVVERKRTPAEIREEFERLQREREERRLQQRTNPKGTISVGIDATDLFDRYDEEYEDVQGSSFPQIEINKMHISQSIEAPLTSTDTAILSGNLSTQNGNGGGSINLAFRRVTSAKGWGELEFGAGDLQGPLFGLKIFRNLTPRCFITTNCALQFSSRGIRPGLTTVLARNLDKNTMGYLQWRWGIQSAMNTSVVRDTKTSHFTVALQLGIPHSFMMVSYQHKFQDEDQTRIKGSLKAGFFGTIVEYGAERKISRHSILGATVSVGVPQGVSLKIKLNRASQTYFFPVHLTDQLLPSAVFYATVGPLVIYFAMHRLIIKPYLRAQKERELEKQRESTASDILQKKQEAEAAVRLMQESVRRIIEAEEARMGLIVVNAWYGKFVNDNSRKNEKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDPCVGEEKSLKVLYQFRGVLHQVMSADNEALRIPKQSHRIDADG
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(514504..514542,516848..516977,517322..517395,518582..518683,522543..522671,523364..523486,524114..524187,524439..524628,524711..524796,525204..525320,526016..526171,526456..526525,526639..526696,527354..527496,527922..528051,528635..528660)
location: region:514504-528660:1
so has part: feature:514504-514542:1:exon
so has part: feature:516848-516977:1:exon
so has part: feature:517322-517395:1:exon
so has part: feature:518582-518683:1:exon
so has part: feature:522543-522671:1:exon
so has part: feature:523364-523486:1:exon
so has part: feature:524114-524187:1:exon
so has part: feature:524439-524628:1:exon
so has part: feature:524711-524796:1:exon
so has part: feature:525204-525320:1:exon
so has part: feature:526016-526171:1:exon
so has part: feature:526456-526525:1:exon
so has part: feature:526639-526696:1:exon
so has part: feature:527354-527496:1:exon
so has part: feature:527922-528051:1:exon
so has part: feature:528635-528660:1:exon

XP_019477993.1
type: Protein
SIO_000068: ncbiprotein

position:514504:1
position: 514504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528660:1
position: 528660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514504-514542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516848-516977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517322-517395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518582-518683:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:522543-522671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523364-523486:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524114-524187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524439-524628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524711-524796:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525204-525320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526016-526171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526456-526525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526639-526696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527354-527496:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:527922-528051:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528635-528660:1:exon

DNAJC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DNAJC11
product: DnaJ heat shock protein family (Hsp40) member C11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010722701.3
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(516503..516524,516848..516977,517322..517395,518582..518683,522543..522671,523364..523486,524114..524187,524439..524628,524711..524796,525204..525320,526016..526171,526456..526525,526639..526696,527354..527496,527922..528051,528635..530150)
location: region:516503-530150:1
so has part: feature:516503-516524:1:exon
so has part: feature:516848-516977:1:exon
so has part: feature:517322-517395:1:exon
so has part: feature:518582-518683:1:exon
so has part: feature:522543-522671:1:exon
so has part: feature:523364-523486:1:exon
so has part: feature:524114-524187:1:exon
so has part: feature:524439-524628:1:exon
so has part: feature:524711-524796:1:exon
so has part: feature:525204-525320:1:exon
so has part: feature:526016-526171:1:exon
so has part: feature:526456-526525:1:exon
so has part: feature:526639-526696:1:exon
so has part: feature:527354-527496:1:exon
so has part: feature:527922-528051:1:exon
so has part: feature:528635-530150:1:exon

position:516503:1
position: 516503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516503-516524:1:exon

position:516524:1
position: 516524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516848-516977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517322-517395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518582-518683:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:522543-522671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523364-523486:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524114-524187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524439-524628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524711-524796:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525204-525320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526016-526171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526456-526525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526639-526696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527354-527496:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:527922-528051:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528635-530150:1:exon

DNAJC11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DNAJC11
product: DnaJ heat shock protein family (Hsp40) member C11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019622449.2
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(516567..516589,516848..516977,517322..517395,518582..518683,522543..522671,523364..523486,524114..524187,524439..524628,524711..524796,525204..525320,526016..526171,526456..526525,526639..526696,527354..527496,527922..528051,528635..530150)
location: region:516567-530150:1
so has part: feature:516567-516589:1:exon
so has part: feature:516848-516977:1:exon
so has part: feature:517322-517395:1:exon
so has part: feature:518582-518683:1:exon
so has part: feature:522543-522671:1:exon
so has part: feature:523364-523486:1:exon
so has part: feature:524114-524187:1:exon
so has part: feature:524439-524628:1:exon
so has part: feature:524711-524796:1:exon
so has part: feature:525204-525320:1:exon
so has part: feature:526016-526171:1:exon
so has part: feature:526456-526525:1:exon
so has part: feature:526639-526696:1:exon
so has part: feature:527354-527496:1:exon
so has part: feature:527922-528051:1:exon
so has part: feature:528635-530150:1:exon

position:516567:1
position: 516567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516567-516589:1:exon

position:516589:1
position: 516589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516848-516977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517322-517395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518582-518683:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:522543-522671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523364-523486:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524114-524187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524439-524628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524711-524796:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525204-525320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526016-526171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526456-526525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526639-526696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527354-527496:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:527922-528051:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528635-530150:1:exon

DNAJC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DNAJC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 11 isoform X2
translation: MASQEELKAAYRRLCMLYHPDKHRDPELKLQAERLFNLVHQAYEVLSDPQTRAIYDIYGRRGLEMEGWEVVERKRTPAEIREEFERLQREREERRLQQRTNPKGTISVGIDATDLFDRYDEEYEDVQGSSFPQIEINKMHISQSIEAPLTSTDTAILSGNLSTQNGNGGGSINLAFRRVTSAKGWGELEFGAGDLQGPLFGLKIFRNLTPRCFITTNCALQFSSRGIRPGLTTVLARNLDKNTMGYLQWRWGIQSAMNTSVVRDTKTSHFTVALQLGIPHSFMMVSYQHKFQDEDQTRIKGSLKAGFFGTIVEYGAERKISRHSILGATVSVGVPQGVSLKIKLNRASQTYFFPVHLTDQLLPSAVFYATVGPLVIYFAMHRLIIKPYLRAQKERELEKQRESTASDILQKKQEAEAAVRLMQESVRRIIEAEEARMGLIVVNAWYGKFVNDNSRKNEKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDPCVGEEKSLKVLYQFRGVLHQVMSADNEALRIPKQSHRIDADG
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(516587..516589,516848..516977,517322..517395,518582..518683,522543..522671,523364..523486,524114..524187,524439..524628,524711..524796,525204..525320,526016..526171,526456..526525,526639..526696,527354..527496,527922..528051,528635..528660)
location: region:516587-528660:1
so has part: feature:516587-516589:1:exon
so has part: feature:516848-516977:1:exon
so has part: feature:517322-517395:1:exon
so has part: feature:518582-518683:1:exon
so has part: feature:522543-522671:1:exon
so has part: feature:523364-523486:1:exon
so has part: feature:524114-524187:1:exon
so has part: feature:524439-524628:1:exon
so has part: feature:524711-524796:1:exon
so has part: feature:525204-525320:1:exon
so has part: feature:526016-526171:1:exon
so has part: feature:526456-526525:1:exon
so has part: feature:526639-526696:1:exon
so has part: feature:527354-527496:1:exon
so has part: feature:527922-528051:1:exon
so has part: feature:528635-528660:1:exon

XP_019477994.1
type: Protein
SIO_000068: ncbiprotein

position:516587:1
position: 516587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516587-516589:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516848-516977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517322-517395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518582-518683:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:522543-522671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:523364-523486:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524114-524187:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524439-524628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524711-524796:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:525204-525320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526016-526171:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526456-526525:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:526639-526696:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527354-527496:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:527922-528051:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:528635-528660:1:exon

DNAJC11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DNAJC11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 11 isoform X3
translation: MLYHPDKHRDPELKLQAERLFNLVHQAYEVLSDPQTRAIYDIYGRRGLEMEGWEVVERKRTPAEIREEFERLQREREERRLQQRTNPKGTISVGIDATDLFDRYDEEYEDVQGSSFPQIEINKMHISQSIEAPLTSTDTAILSGNLSTQNGNGGGSINLAFRRVTSAKGWGELEFGAGDLQGPLFGLKIFRNLTPRCFITTNCALQFSSRGIRPGLTTVLARNLDKNTMGYLQWRWGIQSAMNTSVVRDTKTSHFTVALQLGIPHSFMMVSYQHKFQDEDQTRIKGSLKAGFFGTIVEYGAERKISRHSILGATVSVGVPQGVSLKIKLNRASQTYFFPVHLTDQLLPSAVFYATVGPLVIYFAMHRLIIKPYLRAQKERELEKQRESTASDILQKKQEAEAAVRLMQESVRRIIEAEEARMGLIVVNAWYGKFVNDNSRKNEKVKVIDVTVPLQCLVKDSKLILTEASKAGLPGFYDPCVGEEKSLKVLYQFRGVLHQVMSADNEALRIPKQSHRIDADG
SIO_010081: DNAJC11
subclass of: SO_0000673
so part of: DNAJC11
location: join(516890..516977,517322..517395,518582..518683,522543..522671,523364..523486,524114..524187,524439..524628,524711..524796,525204..525320,526016..526171,526456..526525,526639..526696,527354..527496,527922..528051,528635..528660)
location: region:516890-528660:1
so has part: feature:516890-516977:1:exon
so has part: feature:517322-517395:1:exon
so has part: feature:518582-518683:1:exon
so has part: feature:522543-522671:1:exon
so has part: feature:523364-523486:1:exon
so has part: feature:524114-524187:1:exon
so has part: feature:524439-524628:1:exon
so has part: feature:524711-524796:1:exon
so has part: feature:525204-525320:1:exon
so has part: feature:526016-526171:1:exon
so has part: feature:526456-526525:1:exon
so has part: feature:526639-526696:1:exon
so has part: feature:527354-527496:1:exon
so has part: feature:527922-528051:1:exon
so has part: feature:528635-528660:1:exon

XP_010721003.1
type: Protein
SIO_000068: ncbiprotein

position:516890:1
position: 516890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516890-516977:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:517322-517395:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518582-518683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:522543-522671:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523364-523486:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:524114-524187:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524439-524628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:524711-524796:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:525204-525320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:526016-526171:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526456-526525:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:526639-526696:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:527354-527496:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:527922-528051:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:528635-528660:1:exon

PHF13
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PHF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(532602..>536326)
location: region:532602-536326:-1
so has part: feature:532602-536326:-1:exon
subclass of: SO_0000010

100546828
type: Gene
SIO_000068: ncbigene

position:532602:-1
position: 532602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536326:-1
position: 536326
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:532602-536326:-1:exon

PHF13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PHF13
product: PHD finger protein 13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_003212192.4
SIO_010081: PHF13
subclass of: SO_0000673
so part of: PHF13
location: complement(join(532602..535033,535429..535981,536240..>536326))
location: region:532602-536326:-1
so has part: feature:536240-536326:-1:exon
so has part: feature:535429-535981:-1:exon
so has part: feature:532602-535033:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:536240-536326:-1:exon

position:536240:-1
position: 536240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:535429-535981:-1:exon

position:535429:-1
position: 535429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535981:-1
position: 535981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:532602-535033:-1:exon

position:535033:-1
position: 535033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHF13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PHF13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 13
translation: SRRHRTVEDFNKFCTFVLAYAGYIPYPQEETPLRNSPSPPNSTGGTIDSDSWDPRFNDIPSSVSLPAKNRKNFSQLKRAKPYGSLFQRAKPGNFLPERKQIDKIRKKKKLKRRETEVSTEEDYEEKLLELEAEDSYTETPMSPSSEGDPQSVAEHCSVWDSDTASSVTYPTGTGEQAVEIQSVGKRTVIRQGKQVVFRDEDGTGDDEDIMVDSDDDSWDLVTCFCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVPEVYICQKCRDSKFDIRRSNRSRTGSRRRFLD
SIO_010081: PHF13
subclass of: SO_0000673
so part of: PHF13
location: complement(join(534807..535033,535429..535981,536240..>536326))
location: region:534807-536326:-1
so has part: feature:536240-536326:-1:exon
so has part: feature:535429-535981:-1:exon
so has part: feature:534807-535033:-1:exon

XP_003212240.2
type: Protein
SIO_000068: ncbiprotein

position:534807:-1
position: 534807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:536240-536326:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:535429-535981:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:534807-535033:-1:exon

KLHL21
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KLHL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <537781..543019
location: region:537781-543019:1
so has part: feature:537781-543019:1:exon
subclass of: SO_0000010

100546981
type: Gene
SIO_000068: ncbigene

position:537781:1
position: 537781
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:543019:1
position: 543019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537781-543019:1:exon

KLHL21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KLHL21
product: kelch like family member 21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 215 samples with support for all annotated introns
transcript id: XM_010722724.2
SIO_010081: KLHL21
subclass of: SO_0000673
so part of: KLHL21
location: join(<537781..538027,539806..540211,541927..541999,542311..543019)
location: region:537781-543019:1
so has part: feature:537781-538027:1:exon
so has part: feature:539806-540211:1:exon
so has part: feature:541927-541999:1:exon
so has part: feature:542311-543019:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537781-538027:1:exon

position:538027:1
position: 538027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:539806-540211:1:exon

position:539806:1
position: 539806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540211:1
position: 540211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:541927-541999:1:exon

position:541927:1
position: 541927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541999:1
position: 541999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542311-543019:1:exon

position:542311:1
position: 542311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLHL21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KLHL21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 21
translation: DFQAARLDRHDRGPCARMRPRPSTGLAEILVLVGGCDRDCDELVTVDCYNPRTGHWRYLAEFPEHLGGGYSVAALGNDIYVTGGSDGSRLYDCVWRYNSSVNEWTEVSPMLKAREYHSSTVLDGLLYVIASDSTERYDHSVDSWEALQPMLYPMDNCSTTSCRGKLFAIGSLSGKETMVMQCYDPDSDLWSLVNCGHLPPWSFAPKTVTLNGLMYFIRDDSAEVDVYNPVKNEWDKIPAMLQVHVGGSVAVLGGKLYVSGGYDNTFELSDVLEAYDPETRTWSVAGRLPEPIFWHGSVSIFRQFMPETTQEDDSITLDNTINLNRQRPNLHHQNLNELR
SIO_010081: KLHL21
subclass of: SO_0000673
so part of: KLHL21
location: join(<537781..538027,539806..540211,541927..541999,542311..542604)
location: region:537781-542604:1
so has part: feature:537781-538027:1:exon
so has part: feature:539806-540211:1:exon
so has part: feature:541927-541999:1:exon
so has part: feature:542311-542604:1:exon

XP_010721026.1
type: Protein
SIO_000068: ncbiprotein

position:542604:1
position: 542604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537781-538027:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539806-540211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541927-541999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542311-542604:1:exon

ZBTB48
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ZBTB48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(545345..>551144)
location: region:545345-551144:-1
so has part: feature:545345-551144:-1:exon
subclass of: SO_0000010

100547137
type: Gene
SIO_000068: ncbigene

position:545345:-1
position: 545345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551144:-1
position: 551144
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545345-551144:-1:exon

ZBTB48
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZBTB48
product: zinc finger and BTB domain containing 48
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010722725.2
SIO_010081: ZBTB48
subclass of: SO_0000673
so part of: ZBTB48
location: complement(join(545345..546185,546522..546610,546765..546929,547365..547501,548121..548275,548741..548827,549273..549365,549791..549902,550999..>551144))
location: region:545345-551144:-1
so has part: feature:550999-551144:-1:exon
so has part: feature:549791-549902:-1:exon
so has part: feature:549273-549365:-1:exon
so has part: feature:548741-548827:-1:exon
so has part: feature:548121-548275:-1:exon
so has part: feature:547365-547501:-1:exon
so has part: feature:546765-546929:-1:exon
so has part: feature:546522-546610:-1:exon
so has part: feature:545345-546185:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550999-551144:-1:exon

position:550999:-1
position: 550999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:549791-549902:-1:exon

position:549791:-1
position: 549791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549902:-1
position: 549902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:549273-549365:-1:exon

position:549273:-1
position: 549273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549365:-1
position: 549365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:548741-548827:-1:exon

position:548741:-1
position: 548741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548827:-1
position: 548827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:548121-548275:-1:exon

position:548121:-1
position: 548121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548275:-1
position: 548275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:547365-547501:-1:exon

position:547365:-1
position: 547365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547501:-1
position: 547501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:546765-546929:-1:exon

position:546765:-1
position: 546765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546929:-1
position: 546929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:546522-546610:-1:exon

position:546522:-1
position: 546522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546610:-1
position: 546610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:545345-546185:-1:exon

position:546185:-1
position: 546185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZBTB48
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZBTB48
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere zinc finger-associated protein
translation: PLPEKKALRSKGKPGAGAAGSRKGAAVPVECPTCHKSFLSKYYLKVHNRKHTGEKPFECSKCGKCYFRKENLLEHEARNCMSRTEQVFTCSVCQEVFKRRMELRLHVVSHTGEMPYKCSSCVQQFMQKKDLQSHMIKLHGAPKPQACSTCSKCFLSRTELRLHEAFKHRGEKLFVCEECGHRASSRNGLQMHIKAKHRNERPYVCEFCHHAFTQKANLNMHLRTHTGEKPFQCHLCGKTFRTQASLDKHNRTHTGERPFSCEFCDQRFTEKGPLLRHIASRHQEGRPHFCQICGKTFKAVEQLRVHVRRHKGVRKFECTECGYKFTRQAHLRRHMEIHDRVENYNPRQRKLRNLIIEDEKAVVVALQPPQELEVGSAEVIVESLSHGPLPEEIPVQRLCSNDNFSTADVIEQSLIITTTIPDDCGT
SIO_010081: ZBTB48
subclass of: SO_0000673
so part of: ZBTB48
location: complement(join(545889..546185,546522..546610,546765..546929,547365..547501,548121..548275,548741..548827,549273..549365,549791..549902,550999..>551144))
location: region:545889-551144:-1
so has part: feature:550999-551144:-1:exon
so has part: feature:549791-549902:-1:exon
so has part: feature:549273-549365:-1:exon
so has part: feature:548741-548827:-1:exon
so has part: feature:548121-548275:-1:exon
so has part: feature:547365-547501:-1:exon
so has part: feature:546765-546929:-1:exon
so has part: feature:546522-546610:-1:exon
so has part: feature:545889-546185:-1:exon

XP_010721027.1
type: Protein
SIO_000068: ncbiprotein

position:545889:-1
position: 545889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550999-551144:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:549791-549902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549273-549365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:548741-548827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548121-548275:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:547365-547501:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546765-546929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:546522-546610:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:545889-546185:-1:exon

TAS1R1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TAS1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(551960..>556379)
location: region:551960-556379:-1
so has part: feature:551960-556379:-1:exon
subclass of: SO_0000010

104914114
type: Gene
SIO_000068: ncbigene

position:551960:-1
position: 551960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556379:-1
position: 556379
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551960-556379:-1:exon

TAS1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TAS1R1
product: taste 1 receptor member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010722726.2
SIO_010081: TAS1R1
subclass of: SO_0000673
so part of: TAS1R1
location: complement(join(551960..552456,552568..553061,554148..554268,554675..554887,555358..556146,556323..>556379))
location: region:551960-556379:-1
so has part: feature:556323-556379:-1:exon
so has part: feature:555358-556146:-1:exon
so has part: feature:554675-554887:-1:exon
so has part: feature:554148-554268:-1:exon
so has part: feature:552568-553061:-1:exon
so has part: feature:551960-552456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556323-556379:-1:exon

position:556323:-1
position: 556323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:555358-556146:-1:exon

position:555358:-1
position: 555358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556146:-1
position: 556146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:554675-554887:-1:exon

position:554675:-1
position: 554675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554887:-1
position: 554887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:554148-554268:-1:exon

position:554148:-1
position: 554148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:554268:-1
position: 554268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552568-553061:-1:exon

position:552568:-1
position: 552568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553061:-1
position: 553061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551960-552456:-1:exon

position:552456:-1
position: 552456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAS1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TAS1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: taste receptor type 1 member 1
translation: STQLALTAAAILGVFLVPQISYEASLEMLSLKRFYPSFLRTIPSDGQQVKAIALLLQHFRWTWVALVGSDNSYGRDGLNALYELLATSEVCVAYRGVIPVTKDASSPEFHKLIQILVDIRVNVTVVFSNRRNAQPFFEAVVQNNITGMVWVGSEDWSLAQTIWQVPGIRNIGSVIGISVEQAEPTLLKRLESWENEKERGVSGSAGSTGLVGENELSSSEGVQLNCTQHCPGCHLLAGTPDIYDIQASYNVYSAVYAVAHGLHDLLGCTSGVCSKGRVYPWQLLQKIKQVNFSLHKSQISFDANGNIRKGYNIIAWNWGGRSWAFDVVGAFTVNPDQLHIDQSKILWHTKDHQAPVSVCSWPCAAGEMRLQQNRHRCCFSCVACPAGTFLNRTVLYACQACGRDEWAPVGSETCFNRTVEFLSWADPLSCVLLIPTVLLLLLTAGLAALFARNASTPVVRSAGGKMCFLMLGTLACACSSIFFNFGEPTWLSCLVRFPLFTISFTVFLSCVATRCFQIVCIFKLSARWRALHEAWQRRGGPALFIAANTTAQAVLCAARVVLECGAGSAPGETAAMLYNVLLSLGCFALSYAGKDLPADYNEAKCLTCSLLLHLACSAAVLCTRSAFRGRSAALTAVLGALGTLATLLGGYFLPKGFVVLLRPHLNTAERFQRAIRSYTRRRDD
SIO_010081: TAS1R1
subclass of: SO_0000673
so part of: TAS1R1
location: complement(join(552076..552456,552568..553061,554148..554268,554675..554887,555358..556146,556323..>556379))
location: region:552076-556379:-1
so has part: feature:556323-556379:-1:exon
so has part: feature:555358-556146:-1:exon
so has part: feature:554675-554887:-1:exon
so has part: feature:554148-554268:-1:exon
so has part: feature:552568-553061:-1:exon
so has part: feature:552076-552456:-1:exon

XP_010721028.1
type: Protein
SIO_000068: ncbiprotein

position:552076:-1
position: 552076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556323-556379:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:555358-556146:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:554675-554887:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554148-554268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552568-553061:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552076-552456:-1:exon

NOL9
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NOL9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <556917..560581
location: region:556917-560581:1
so has part: feature:556917-560581:1:exon
subclass of: SO_0000010

100544885
type: Gene
SIO_000068: ncbigene

position:556917:1
position: 556917
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:560581:1
position: 560581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556917-560581:1:exon

NOL9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NOL9
product: nucleolar protein 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003212180.4
SIO_010081: NOL9
subclass of: SO_0000673
so part of: NOL9
location: join(<556917..557086,557590..557687,557968..558129,558328..558616,558986..559097,559458..559635,559830..559963,560276..560581)
location: region:556917-560581:1
so has part: feature:556917-557086:1:exon
so has part: feature:557590-557687:1:exon
so has part: feature:557968-558129:1:exon
so has part: feature:558328-558616:1:exon
so has part: feature:558986-559097:1:exon
so has part: feature:559458-559635:1:exon
so has part: feature:559830-559963:1:exon
so has part: feature:560276-560581:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:556917-557086:1:exon

position:557086:1
position: 557086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557590-557687:1:exon

position:557590:1
position: 557590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:557687:1
position: 557687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:557968-558129:1:exon

position:557968:1
position: 557968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558129:1
position: 558129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:558328-558616:1:exon

position:558328:1
position: 558328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558616:1
position: 558616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:558986-559097:1:exon

position:558986:1
position: 558986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559097:1
position: 559097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:559458-559635:1:exon

position:559458:1
position: 559458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559635:1
position: 559635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:559830-559963:1:exon

position:559830:1
position: 559830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559963:1
position: 559963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:560276-560581:1:exon

position:560276:1
position: 560276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOL9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NOL9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polynucleotide 5'-hydroxyl-kinase NOL9
translation: AGRLRAAASRALGGGPCSVLCSLLVEDEGVPVIMVCGPKSIGKSTFNRYLINLLLNHLPSVEYMECDIGQTEFTPPGCVSLSNVTEPFLGPPFTHQRTPRKMVYYGQTSCEQDTERYIDVVKYVFSSYRKEVPLVINTMGWVKGEGLLLLTDMIRLLSPTHVVQMDVYDWKAMAPLTPENVHLAPGLYTKGKQQAKGKRMDLSAAEGWKCSEGEEDASAPEYKLLYVHPEFPRAGAAGEARVHSSILRDMSILGYLGQLQPPDVASVLPLHSLVPYQVPFNAVALRVIHTDVAPTNIMYAVNASWVGLCRIPDEIRCQTAGPVLLTQTPICDCLGFGIVRGVDMEKHLYHILTPVPPEKLRVVNCLLLGNIAIPNCIFVSQEGIEGEIPYVTSEYNYSILGSGKLRKKKHFKKRECTFQCDYT
SIO_010081: NOL9
subclass of: SO_0000673
so part of: NOL9
location: join(<556917..557086,557590..557687,557968..558129,558328..558616,558986..559097,559458..559635,559830..559963,560276..560404)
location: region:556917-560404:1
so has part: feature:556917-557086:1:exon
so has part: feature:557590-557687:1:exon
so has part: feature:557968-558129:1:exon
so has part: feature:558328-558616:1:exon
so has part: feature:558986-559097:1:exon
so has part: feature:559458-559635:1:exon
so has part: feature:559830-559963:1:exon
so has part: feature:560276-560404:1:exon

XP_003212228.2
type: Protein
SIO_000068: ncbiprotein

position:560404:1
position: 560404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556917-557086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:557590-557687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:557968-558129:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:558328-558616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:558986-559097:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559458-559635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559830-559963:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:560276-560404:1:exon

PLEKHG5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PLEKHG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 561394..573628
location: region:561394-573628:1
so has part: feature:561394-573628:1:exon
subclass of: SO_0000010

100547291
type: Gene
SIO_000068: ncbigene

position:561394:1
position: 561394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573628:1
position: 573628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561394-573628:1:exon

PLEKHG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PLEKHG5
product: pleckstrin homology and RhoGEF domain containing G5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_010722704.3
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(561394..562960,564442..564518,566812..566941,567032..567134,567204..567264,567364..567455,567532..567668,567745..567893,569399..569584,569742..569912,569984..570079,570167..570217,570351..570500,570577..570687,570752..570901,570972..571109,571182..571301,571377..571509,571586..571701,571771..571932,572005..572793,572874..573628)
location: region:561394-573628:1
so has part: feature:561394-562960:1:exon
so has part: feature:564442-564518:1:exon
so has part: feature:566812-566941:1:exon
so has part: feature:567032-567134:1:exon
so has part: feature:567204-567264:1:exon
so has part: feature:567364-567455:1:exon
so has part: feature:567532-567668:1:exon
so has part: feature:567745-567893:1:exon
so has part: feature:569399-569584:1:exon
so has part: feature:569742-569912:1:exon
so has part: feature:569984-570079:1:exon
so has part: feature:570167-570217:1:exon
so has part: feature:570351-570500:1:exon
so has part: feature:570577-570687:1:exon
so has part: feature:570752-570901:1:exon
so has part: feature:570972-571109:1:exon
so has part: feature:571182-571301:1:exon
so has part: feature:571377-571509:1:exon
so has part: feature:571586-571701:1:exon
so has part: feature:571771-571932:1:exon
so has part: feature:572005-572793:1:exon
so has part: feature:572874-573628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:561394-562960:1:exon

position:562960:1
position: 562960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:564442-564518:1:exon

position:564442:1
position: 564442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564518:1
position: 564518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:566812-566941:1:exon

position:566812:1
position: 566812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566941:1
position: 566941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:567032-567134:1:exon

position:567032:1
position: 567032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567134:1
position: 567134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:567204-567264:1:exon

position:567204:1
position: 567204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567264:1
position: 567264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:567364-567455:1:exon

position:567364:1
position: 567364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567455:1
position: 567455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:567532-567668:1:exon

position:567532:1
position: 567532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567668:1
position: 567668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:567745-567893:1:exon

position:567745:1
position: 567745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567893:1
position: 567893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:569399-569584:1:exon

position:569399:1
position: 569399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569584:1
position: 569584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:569742-569912:1:exon

position:569742:1
position: 569742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:569912:1
position: 569912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:569984-570079:1:exon

position:569984:1
position: 569984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570079:1
position: 570079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:570167-570217:1:exon

position:570167:1
position: 570167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570217:1
position: 570217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:570351-570500:1:exon

position:570351:1
position: 570351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570500:1
position: 570500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:570577-570687:1:exon

position:570577:1
position: 570577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570687:1
position: 570687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:570752-570901:1:exon

position:570752:1
position: 570752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:570901:1
position: 570901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:570972-571109:1:exon

position:570972:1
position: 570972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571109:1
position: 571109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:571182-571301:1:exon

position:571182:1
position: 571182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571301:1
position: 571301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:571377-571509:1:exon

position:571377:1
position: 571377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571509:1
position: 571509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:571586-571701:1:exon

position:571586:1
position: 571586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571701:1
position: 571701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:571771-571932:1:exon

position:571771:1
position: 571771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571932:1
position: 571932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:572005-572793:1:exon

position:572005:1
position: 572005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572793:1
position: 572793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:572874-573628:1:exon

position:572874:1
position: 572874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEKHG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PLEKHG5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pleckstrin homology domain-containing family G member 5
translation: MFLYWKKRGAYELGALPPALAGMEYGAVERFSWSSSLDISEQLADEQRPAEEQGLRCQNPDCTDKRRAAKVCHHAECQQLNCSSPLSLCEACDGHLHDTMHFDGHIRFDLPPPGSILARNVSTRSCPPRTSPASDMEDDDEGQADGRGDKRSSALKLPKKKARRRHTDDPSKECFTLKFDLNVDIEAEIVPAMKKKSLGDVLLPVFERRAIEHSKVDIYLDQSNTPLSLQFEAYRFGGHYLRVKAKPGDELKVEQAARDARSASLPILRPASTAALLGTGLEPGPGRREGTDILAPGRRRKNMTEFLGDASIPSPEPSLHGSGSLPTNGTDTWKNRAASRFSGFFSSGASTGPFGREVDKMEQLESKLHTYSSFGLPKLPPQLRFDQDSWEEDGDDSSLVLEDSWQQIIEGTEALTRRQCHQQEAIWELLHTEATYIRKLKVITDLFLCCLLNLQESGLLCEVDAERLFGNIGEIIQLHRSLWSSVMAPVLDKARRTKVLLDPMDFLKGFKTFGTLFKPYIQYCMEEEGCMEYMRNLLRDSELFRAYVTWAEKHKQCSRLKLSDMLVKPHQRLTKYPLLLKSVLKKTDDARTRDAILTMIGSVEHFINHVNSRMRQRQEQQRLAAILSRIDAYEVVEGSTDEVDKLLKEFLRLDLTAPMPGTSPDDTRQLLLEGSLKMREGKDSKMDVYCFLFTDLFLITKPVKKAERTKVIRQPLLVDKVICRELKDPGSFLLIYLNEFGSAVAAYTFQASGQSLCRSWVEALHNAQNLLQRLRLQEQQRGQCRRLQXEEEEDEEDGESSTSTASSPTVLRRSSTSLDSQQCPSDGSTETISVVVVDGGDELSSPDSDVGPFGSPSDSTSVSTGTSVSTATGTSGSTPTHELPLGSLPLPPSVTTQPGSFCSASIDSAYGTLSPASPRDFPRQQDVGAEEGPEALAPQPPSPRLRRRTPVQLLPCKARVLKSKSEASLLQLLAGPPTPLNQSRSLSDLCMAPPAPPLLQRTSHSPEHLAPGAGSSSSGDSTSELSEPEEPMETPGPTLGQPGHSPQPPAHRTLSDSSSAQHRKLTLAQLYRIRTTLLLNSTLTASEV
SIO_010081: PLEKHG5
subclass of: SO_0000673
so part of: PLEKHG5
location: join(562828..562960,564442..564518,566812..566941,567032..567134,567204..567264,567364..567455,567532..567668,567745..567893,569399..569584,569742..569912,569984..570079,570167..570217,570351..570500,570577..570687,570752..570901,570972..571109,571182..571301,571377..571509,571586..571701,571771..571932,572005..572793,572874..572883)
location: region:562828-572883:1
so has part: feature:562828-562960:1:exon
so has part: feature:564442-564518:1:exon
so has part: feature:566812-566941:1:exon
so has part: feature:567032-567134:1:exon
so has part: feature:567204-567264:1:exon
so has part: feature:567364-567455:1:exon
so has part: feature:567532-567668:1:exon
so has part: feature:567745-567893:1:exon
so has part: feature:569399-569584:1:exon
so has part: feature:569742-569912:1:exon
so has part: feature:569984-570079:1:exon
so has part: feature:570167-570217:1:exon
so has part: feature:570351-570500:1:exon
so has part: feature:570577-570687:1:exon
so has part: feature:570752-570901:1:exon
so has part: feature:570972-571109:1:exon
so has part: feature:571182-571301:1:exon
so has part: feature:571377-571509:1:exon
so has part: feature:571586-571701:1:exon
so has part: feature:571771-571932:1:exon
so has part: feature:572005-572793:1:exon
so has part: feature:572874-572883:1:exon

XP_010721006.1
type: Protein
SIO_000068: ncbiprotein

position:562828:1
position: 562828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:572883:1
position: 572883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562828-562960:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:564442-564518:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:566812-566941:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:567032-567134:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:567204-567264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:567364-567455:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:567532-567668:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:567745-567893:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:569399-569584:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:569742-569912:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:569984-570079:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:570167-570217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:570351-570500:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:570577-570687:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:570752-570901:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:570972-571109:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:571182-571301:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:571377-571509:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:571586-571701:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:571771-571932:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:572005-572793:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:572874-572883:1:exon

TNFRSF25
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TNFRSF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 573932..578011
location: region:573932-578011:1
so has part: feature:573932-578011:1:exon
subclass of: SO_0000010

100550628
type: Gene
SIO_000068: ncbigene

position:573932:1
position: 573932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578011:1
position: 578011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573932-578011:1:exon

TNFRSF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TNFRSF25
product: TNF receptor superfamily member 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_010722703.3
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(573932..574099,575780..575948,576099..576230,576365..576523,576598..576679,576745..576803,576884..577092,577173..578011)
location: region:573932-578011:1
so has part: feature:573932-574099:1:exon
so has part: feature:575780-575948:1:exon
so has part: feature:576099-576230:1:exon
so has part: feature:576365-576523:1:exon
so has part: feature:576598-576679:1:exon
so has part: feature:576745-576803:1:exon
so has part: feature:576884-577092:1:exon
so has part: feature:577173-578011:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:573932-574099:1:exon

position:574099:1
position: 574099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:575780-575948:1:exon

position:575780:1
position: 575780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575948:1
position: 575948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576099-576230:1:exon

position:576099:1
position: 576099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576230:1
position: 576230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:576365-576523:1:exon

position:576365:1
position: 576365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576523:1
position: 576523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:576598-576679:1:exon

position:576598:1
position: 576598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576679:1
position: 576679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:576745-576803:1:exon

position:576745:1
position: 576745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576803:1
position: 576803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:576884-577092:1:exon

position:576884:1
position: 576884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577092:1
position: 577092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:577173-578011:1:exon

position:577173:1
position: 577173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TNFRSF25
product: TNF receptor superfamily member 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_010722702.3
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(573932..574099,575780..575975,576099..576230,576365..576523,576598..576679,576745..576803,576884..577092,577173..578010)
location: region:573932-578010:1
so has part: feature:573932-574099:1:exon
so has part: feature:575780-575975:1:exon
so has part: feature:576099-576230:1:exon
so has part: feature:576365-576523:1:exon
so has part: feature:576598-576679:1:exon
so has part: feature:576745-576803:1:exon
so has part: feature:576884-577092:1:exon
so has part: feature:577173-578010:1:exon

position:578010:1
position: 578010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:573932-574099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575780-575975:1:exon

position:575975:1
position: 575975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576099-576230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576365-576523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576598-576679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576745-576803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576884-577092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577173-578010:1:exon

TNFRSF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TNFRSF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 25 isoform X1
translation: MKHRCPGAASVLLAVLWLLASGSQPPGCQDCSMLRSQQGLVLPSNRTRRSTEKLSCPSGMTWIPSVGWCCTLCAPGKFLQTPCTRHGNDSVCVPCPAGTFLSHPNILPKCNACYMCDHQTFQTVVSNCSATSNIACGCESGYFRECQNKNDNCSDFSCKKCKTCPGKLLLQPCSDRQDAQCGSCKPNFYAEGSECRPCHMSTPETCGEECQRVCGHRARGSGLEYILLGLTGPLFLGALAIYHKRKRLLMETPAVSPLPTVSPWNCSGPTACMHPIIQRAAATEVVQCQEWEPGPSMARRSSESSALLHQQPSRAALPNGTTEPSVPQEPSTAHSPAPPLSSPQRCALLQGSQLYAVINAVPVRRWKEFMRVLELRDTEIELVEMEVAPFRDRQYEMLKRWCQQTSATLDRIFAALEHMDLSGCAETLRQSLALGP
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(574070..574099,575780..575975,576099..576230,576365..576523,576598..576679,576745..576803,576884..577092,577173..577616)
location: region:574070-577616:1
so has part: feature:574070-574099:1:exon
so has part: feature:575780-575975:1:exon
so has part: feature:576099-576230:1:exon
so has part: feature:576365-576523:1:exon
so has part: feature:576598-576679:1:exon
so has part: feature:576745-576803:1:exon
so has part: feature:576884-577092:1:exon
so has part: feature:577173-577616:1:exon

XP_010721004.1
type: Protein
SIO_000068: ncbiprotein

position:574070:1
position: 574070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577616:1
position: 577616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574070-574099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575780-575975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576099-576230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576365-576523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576598-576679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576745-576803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576884-577092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577173-577616:1:exon

TNFRSF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TNFRSF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 25 isoform X2
translation: MKHRCPGAASVLLAVLWLLASGSQPPGCQDCSMLRSQQGLVLPSNRTRRSTEKLSCPSGMTWIPSVGKFLQTPCTRHGNDSVCVPCPAGTFLSHPNILPKCNACYMCDHQTFQTVVSNCSATSNIACGCESGYFRECQNKNDNCSDFSCKKCKTCPGKLLLQPCSDRQDAQCGSCKPNFYAEGSECRPCHMSTPETCGEECQRVCGHRARGSGLEYILLGLTGPLFLGALAIYHKRKRLLMETPAVSPLPTVSPWNCSGPTACMHPIIQRAAATEVVQCQEWEPGPSMARRSSESSALLHQQPSRAALPNGTTEPSVPQEPSTAHSPAPPLSSPQRCALLQGSQLYAVINAVPVRRWKEFMRVLELRDTEIELVEMEVAPFRDRQYEMLKRWCQQTSATLDRIFAALEHMDLSGCAETLRQSLALGP
SIO_010081: TNFRSF25
subclass of: SO_0000673
so part of: TNFRSF25
location: join(574070..574099,575780..575948,576099..576230,576365..576523,576598..576679,576745..576803,576884..577092,577173..577616)
location: region:574070-577616:1
so has part: feature:574070-574099:1:exon
so has part: feature:575780-575948:1:exon
so has part: feature:576099-576230:1:exon
so has part: feature:576365-576523:1:exon
so has part: feature:576598-576679:1:exon
so has part: feature:576745-576803:1:exon
so has part: feature:576884-577092:1:exon
so has part: feature:577173-577616:1:exon

XP_010721005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:574070-574099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:575780-575948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576099-576230:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:576365-576523:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:576598-576679:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:576745-576803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576884-577092:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:577173-577616:1:exon

ESPN
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ESPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(578993..>588813)
location: region:578993-588813:-1
so has part: feature:578993-588813:-1:exon
subclass of: SO_0000010

100544268
type: Gene
SIO_000068: ncbigene

position:578993:-1
position: 578993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588813:-1
position: 588813
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578993-588813:-1:exon

ESPN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ESPN
product: espin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556712.1
SIO_010081: ESPN
subclass of: SO_0000673
so part of: ESPN
location: complement(join(578993..581038,581373..581654,581754..581899,582206..582401,582596..582710,583267..583334,583407..583568,584912..585246,585317..585536,585632..585763,585838..586020,586098..586284,588515..>588813))
location: region:578993-588813:-1
so has part: feature:588515-588813:-1:exon
so has part: feature:586098-586284:-1:exon
so has part: feature:585838-586020:-1:exon
so has part: feature:585632-585763:-1:exon
so has part: feature:585317-585536:-1:exon
so has part: feature:584912-585246:-1:exon
so has part: feature:583407-583568:-1:exon
so has part: feature:583267-583334:-1:exon
so has part: feature:582596-582710:-1:exon
so has part: feature:582206-582401:-1:exon
so has part: feature:581754-581899:-1:exon
so has part: feature:581373-581654:-1:exon
so has part: feature:578993-581038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:588515-588813:-1:exon

position:588515:-1
position: 588515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586098-586284:-1:exon

position:586098:-1
position: 586098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586284:-1
position: 586284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:585838-586020:-1:exon

position:585838:-1
position: 585838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586020:-1
position: 586020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:585632-585763:-1:exon

position:585632:-1
position: 585632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585763:-1
position: 585763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:585317-585536:-1:exon

position:585317:-1
position: 585317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585536:-1
position: 585536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:584912-585246:-1:exon

position:584912:-1
position: 584912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585246:-1
position: 585246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:583407-583568:-1:exon

position:583407:-1
position: 583407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583568:-1
position: 583568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:583267-583334:-1:exon

position:583267:-1
position: 583267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583334:-1
position: 583334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:582596-582710:-1:exon

position:582596:-1
position: 582596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582710:-1
position: 582710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:582206-582401:-1:exon

position:582206:-1
position: 582206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582401:-1
position: 582401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:581754-581899:-1:exon

position:581754:-1
position: 581754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581899:-1
position: 581899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:581373-581654:-1:exon

position:581373:-1
position: 581373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581654:-1
position: 581654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:578993-581038:-1:exon

position:581038:-1
position: 581038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ESPN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ESPN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: espin
translation: SLSAPPAQPPSPTRSPSLEVQSCPGCQWPLPFLPQDTDNSGATILHLAARFGHHEVIEWLLRFGGSDPTAATDTGALPVHYAAAKGDFPSLRLLLGHCPSTLSAQTKTGATPLYLACQEGHLEIIQYLVKDCGADPHVRANDGMTPLHAAAQMGHNTVIVWLMSFTTVSLSERDDDGATAMHFAASRGHAKVLSWLLLHGGEITADGWGGTPLHDAAENGELECCQILVVNGADLSIRDQDGYTAADLADYNGHVHCAKYLRTVENMSMEHRVLSRDPSADGECRQPDSGMSSPNTTASVPQARFEVGSPASTLSNYDSCNSSQSSTGEKRGGPHAAPAARVPEPALTDMQAYMDMLNPETRPRGRGLASEGPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATRPPPPPPGYPAPAPPVAPDTADIYVRAKNNLRHVESQALRRELVSREGSPEGLRRADSTRRSRNFSKQPSTGDYYKHLGPSAAELPGPRRMAHSEESSPLPADAMHNGGPAESKPGTELASSLQPNTEQPSQHVPGHEADVLPNAKLGPCADTAPAERWLPGVGGLSSTGWHCERPSVPAAPTGIRAPALHGRAGEHGAAGKGLCLGAAPWAVRDARMAGTDGTKSFNMMSPTGDNSELLAEIKAGKSLKPTPQSKGFTTVFSGSGQAGANADSPASSPSPTRTPTPPATPEAGGPPRCMVGGSPEPVLNGSSPVPGPGAVAPPDVEALVPSHDEQGRPIPEWKRQVMVRKLQLRMQEEEEQRRKLEPGNVSPPPCWRYSAAHGGMLGPFGQLMTEEDILRIERQIENLQVMHKVQTVETELEQLEEELQQLLPLSAALAPERFSLDPRRLQGRAEDLPAWCSKTSALLRSMAMLLAALGGRESSGAGGAGSSTMPQRPTPAAAGTQQDARHEILRCGVSVRSLKANYEGLVGAPVPHTRVTKRKRSLPAGVLMDGCTREPVLEEDYGDEDVDGMLRRSRPVQTELSCLQERIDAHKERAVSLFLEHWKKWALAEAPGSRTHGDERLRRLWKQRQAVARLLARWRSVAHRVPGRQIRRLSRAEVLYWPEHFLPHVRGSPMPYDSLSLDLFMLGYFQLLEMNLSPEERRFRHLLCYEMFDRLSTHSWECIRRFHRAALERVEAGHRCWLDGFEDLKQEFFGDSPTSTVAAVGSSPVPPCPAATARGMQEPAQLVSELGEFSNEDICRYIDRSFSFWKEKEAEMFDI
SIO_010081: ESPN
subclass of: SO_0000673
so part of: ESPN
location: complement(join(579656..581038,581373..581654,581754..581899,582206..582401,582596..582710,583267..583334,583407..583568,584912..585246,585317..585536,585632..585763,585838..586020,586098..586284,588515..>588813))
location: region:579656-588813:-1
so has part: feature:588515-588813:-1:exon
so has part: feature:586098-586284:-1:exon
so has part: feature:585838-586020:-1:exon
so has part: feature:585632-585763:-1:exon
so has part: feature:585317-585536:-1:exon
so has part: feature:584912-585246:-1:exon
so has part: feature:583407-583568:-1:exon
so has part: feature:583267-583334:-1:exon
so has part: feature:582596-582710:-1:exon
so has part: feature:582206-582401:-1:exon
so has part: feature:581754-581899:-1:exon
so has part: feature:581373-581654:-1:exon
so has part: feature:579656-581038:-1:exon

XP_031412572.1
type: Protein
SIO_000068: ncbiprotein

position:579656:-1
position: 579656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588515-588813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586098-586284:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:585838-586020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:585632-585763:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:585317-585536:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584912-585246:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:583407-583568:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:583267-583334:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:582596-582710:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:582206-582401:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:581754-581899:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:581373-581654:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:579656-581038:-1:exon

ACOT7
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ACOT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 593674..599983
location: region:593674-599983:1
so has part: feature:593674-599983:1:exon
subclass of: SO_0000010

100547443
type: Gene
SIO_000068: ncbigene

position:593674:1
position: 593674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599983:1
position: 599983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593674-599983:1:exon

ACOT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ACOT7
product: acyl-CoA thioesterase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_003212195.4
SIO_010081: ACOT7
subclass of: SO_0000673
so part of: ACOT7
location: join(593674..593826,594269..594425,595040..595131,595235..595349,595936..596022,597435..597551,597756..597940,599353..599983)
location: region:593674-599983:1
so has part: feature:593674-593826:1:exon
so has part: feature:594269-594425:1:exon
so has part: feature:595040-595131:1:exon
so has part: feature:595235-595349:1:exon
so has part: feature:595936-596022:1:exon
so has part: feature:597435-597551:1:exon
so has part: feature:597756-597940:1:exon
so has part: feature:599353-599983:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593674-593826:1:exon

position:593826:1
position: 593826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:594269-594425:1:exon

position:594269:1
position: 594269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594425:1
position: 594425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:595040-595131:1:exon

position:595040:1
position: 595040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595131:1
position: 595131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:595235-595349:1:exon

position:595235:1
position: 595235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595349:1
position: 595349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:595936-596022:1:exon

position:595936:1
position: 595936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596022:1
position: 596022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:597435-597551:1:exon

position:597435:1
position: 597435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597551:1
position: 597551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:597756-597940:1:exon

position:597756:1
position: 597756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597940:1
position: 597940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:599353-599983:1:exon

position:599353:1
position: 599353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACOT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ACOT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic acyl coenzyme A thioester hydrolase
translation: MRPDDANIAGNVHGGTVLKMIEEAGAIISTRHCNSGQGEPCVAALARVERTDFLSPMCIGEVANVSAEITYTSKHSVEVQVNVMSENILTGAKKVTNKATLWYVPLSLKNVNKVVEVPPIQYTHKEQEDEGRKRYEEQKLERLETKQRNGDVILPVINPEPHTVGYSQSSLIHLVGPSDCTLLGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHEKIKKGSVITISGRMTFTSNKSMEIEVFVDADPFVDEPQERYRAVSAFFTYVSLSKEGKPLPVPQLLTESEEEKRRFEEGKGRYLQTKAKRQAQMQQAAQH
SIO_010081: ACOT7
subclass of: SO_0000673
so part of: ACOT7
location: join(593713..593826,594269..594425,595040..595131,595235..595349,595936..596022,597435..597551,597756..597940,599353..599457)
location: region:593713-599457:1
so has part: feature:593713-593826:1:exon
so has part: feature:594269-594425:1:exon
so has part: feature:595040-595131:1:exon
so has part: feature:595235-595349:1:exon
so has part: feature:595936-596022:1:exon
so has part: feature:597435-597551:1:exon
so has part: feature:597756-597940:1:exon
so has part: feature:599353-599457:1:exon

XP_003212243.2
type: Protein
SIO_000068: ncbiprotein

position:593713:1
position: 593713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:599457:1
position: 599457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593713-593826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:594269-594425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:595040-595131:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595235-595349:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:595936-596022:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:597435-597551:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:597756-597940:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:599353-599457:1:exon

LOC100547599
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100547599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 600872..606645
location: region:600872-606645:1
so has part: feature:600872-606645:1:exon
subclass of: SO_0000010

100547599
type: Gene
SIO_000068: ncbigene

position:600872:1
position: 600872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606645:1
position: 606645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600872-606645:1:exon

LOC100547599
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100547599
product: probable G-protein coupled receptor 153
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010722728.3
SIO_010081: LOC100547599
subclass of: SO_0000673
so part of: LOC100547599
location: join(600872..601293,601434..601863,601926..602115,602190..602380,602450..602512,603735..603939,604503..604720,604887..606645)
location: region:600872-606645:1
so has part: feature:600872-601293:1:exon
so has part: feature:601434-601863:1:exon
so has part: feature:601926-602115:1:exon
so has part: feature:602190-602380:1:exon
so has part: feature:602450-602512:1:exon
so has part: feature:603735-603939:1:exon
so has part: feature:604503-604720:1:exon
so has part: feature:604887-606645:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:600872-601293:1:exon

position:601293:1
position: 601293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:601434-601863:1:exon

position:601434:1
position: 601434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601863:1
position: 601863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:601926-602115:1:exon

position:601926:1
position: 601926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602115:1
position: 602115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:602190-602380:1:exon

position:602190:1
position: 602190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602380:1
position: 602380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:602450-602512:1:exon

position:602450:1
position: 602450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602512:1
position: 602512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:603735-603939:1:exon

position:603735:1
position: 603735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603939:1
position: 603939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:604503-604720:1:exon

position:604503:1
position: 604503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604720:1
position: 604720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:604887-606645:1:exon

position:604887:1
position: 604887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100547599
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100547599
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 153
translation: MVPHPSTMHNEQQLPGNAVAWLACAGVSLLANAWGILSISAKQKKWKPLEFLLCSLAGTHILSTAIPITTYAVVQLRRWHSGYEWNEGLCKVFVSTFYTLTLVTCFSVTSLSYHRMWMVRWPVNYRLSNTRKQAVHTVMGIWMVSFILSTLPAVGWHDTTERFYARDCRFVVTEIGLGFGVCFLLLIGGSMAVGAVCIGIAVFHTVLGRHGPDASNSRFHVPSIVVEDAQGKRRSSIDGSESVKTSLQITYLITVIVLIYDILLGFPVLVVSAASLRSDTSSEWMVLCLLWCSLAQSLLLPLFLWACDRYRANPRAVCEKCRTVLANDDEDEESSLEGAVAVAGELVYDRPYEYGCAAEVLVLDPIATRDFSVLEQSLPPVSPARTEPGDRMQYLQVPPLRRFSHDETDLWTSGQVARSPGPAVPPPRRYMCSLSLFHYSEYLVTAINNPRSLSLDSFLLNHSFEYNLAALSSWVEFTLEKLLLPEMKQITWLSTVGLLMVIFGDCLRKAAMLTAGSNFNHIVQNEKSDTHTLVTSGVYGWFRHPSYVGWFYWSIGTQVLLCNPICVVGYTLASWRFFRERIEEEEITLIHFFGEEYLEYKRKVPSGLPFIKGVKVEL
SIO_010081: LOC100547599
subclass of: SO_0000673
so part of: LOC100547599
location: join(600917..601293,601434..601863,601926..602115,602190..602380,602450..602512,603735..603939,604503..604720,604887..605069)
location: region:600917-605069:1
so has part: feature:600917-601293:1:exon
so has part: feature:601434-601863:1:exon
so has part: feature:601926-602115:1:exon
so has part: feature:602190-602380:1:exon
so has part: feature:602450-602512:1:exon
so has part: feature:603735-603939:1:exon
so has part: feature:604503-604720:1:exon
so has part: feature:604887-605069:1:exon

XP_010721030.1
type: Protein
SIO_000068: ncbiprotein

position:600917:1
position: 600917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605069:1
position: 605069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:600917-601293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:601434-601863:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:601926-602115:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:602190-602380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:602450-602512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:603735-603939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:604503-604720:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604887-605069:1:exon

RNF207
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RNF207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(606773..611237)
location: region:606773-611237:-1
so has part: feature:606773-611237:-1:exon
subclass of: SO_0000010

100547755
type: Gene
SIO_000068: ncbigene

position:606773:-1
position: 606773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611237:-1
position: 611237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:606773-611237:-1:exon

RNF207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF207
product: ring finger protein 207
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010722729.3
SIO_010081: RNF207
subclass of: SO_0000673
so part of: RNF207
location: complement(join(606773..607300,607573..607653,607742..607859,607935..607986,608061..608246,608327..608516,609511..609632,609722..609790,609877..609945,610053..610125,610237..610283,610395..610520,610585..610660,610739..610820,610889..611033,611110..611237))
location: region:606773-611237:-1
so has part: feature:611110-611237:-1:exon
so has part: feature:610889-611033:-1:exon
so has part: feature:610739-610820:-1:exon
so has part: feature:610585-610660:-1:exon
so has part: feature:610395-610520:-1:exon
so has part: feature:610237-610283:-1:exon
so has part: feature:610053-610125:-1:exon
so has part: feature:609877-609945:-1:exon
so has part: feature:609722-609790:-1:exon
so has part: feature:609511-609632:-1:exon
so has part: feature:608327-608516:-1:exon
so has part: feature:608061-608246:-1:exon
so has part: feature:607935-607986:-1:exon
so has part: feature:607742-607859:-1:exon
so has part: feature:607573-607653:-1:exon
so has part: feature:606773-607300:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:611110-611237:-1:exon

position:611110:-1
position: 611110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610889-611033:-1:exon

position:610889:-1
position: 610889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611033:-1
position: 611033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:610739-610820:-1:exon

position:610739:-1
position: 610739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610820:-1
position: 610820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:610585-610660:-1:exon

position:610585:-1
position: 610585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610660:-1
position: 610660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:610395-610520:-1:exon

position:610395:-1
position: 610395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610520:-1
position: 610520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:610237-610283:-1:exon

position:610237:-1
position: 610237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610283:-1
position: 610283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:610053-610125:-1:exon

position:610053:-1
position: 610053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610125:-1
position: 610125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:609877-609945:-1:exon

position:609877:-1
position: 609877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609945:-1
position: 609945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:609722-609790:-1:exon

position:609722:-1
position: 609722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609790:-1
position: 609790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:609511-609632:-1:exon

position:609511:-1
position: 609511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609632:-1
position: 609632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:608327-608516:-1:exon

position:608327:-1
position: 608327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608516:-1
position: 608516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:608061-608246:-1:exon

position:608061:-1
position: 608061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608246:-1
position: 608246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:607935-607986:-1:exon

position:607935:-1
position: 607935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607986:-1
position: 607986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:607742-607859:-1:exon

position:607742:-1
position: 607742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607859:-1
position: 607859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:607573-607653:-1:exon

position:607573:-1
position: 607573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607653:-1
position: 607653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:606773-607300:-1:exon

position:607300:-1
position: 607300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 207
translation: MCFCNTCSQPLCAPCREETHRAKVFARHEIVSLSKRTKAIHKKCPLHEEPYIMFSTEKKSMLCINCFRDMQGESRAHCIDIETAYVQGCEKLDQAVLAVKELQTSTREAIVLLKAMIEEVRNSASEEESAINALFSGMQEQLSDRKKALLKAVQSQHEEKEKAFKEQLAHLASLLPTLQVHLVICSAFLSSANKAEFLDLGYQLMERLQRIVKLPHRLRPAQTSKINTEYRAEFARCLEPLLVLTPRRSVVGSAGGIGSGITGANMIPGGQCSKTLMVPGCPPAGDKMSSSSMVRKPTLHRYISTKVLLAEGRETPFAEHCRNYENTYRMLQTEIQGLKDQVQELHRDLTKHHSLIRTEIMSEILQKSLQMDVQIAAHYSSVEMMRSVFEEVWEETYQRVANEQEIYEAQLHDLLQLRQENSCLTTITKQIAPYVRSIAKVKERLEPRLQEPREPKDEHTQMLLRIDDSSEAAQRDSSPGGTDSREQPLGSQRGCTPALIPGDPPPKKKEHRGSAQRSGTLSADREEPTGSS
SIO_010081: RNF207
subclass of: SO_0000673
so part of: RNF207
location: complement(join(607126..607300,607573..607653,607742..607859,607935..607986,608061..608246,608327..608516,609511..609632,609722..609790,609877..609945,610053..610125,610237..610283,610395..610520,610585..610660,610739..610820,610889..611021))
location: region:607126-611021:-1
so has part: feature:610889-611021:-1:exon
so has part: feature:610739-610820:-1:exon
so has part: feature:610585-610660:-1:exon
so has part: feature:610395-610520:-1:exon
so has part: feature:610237-610283:-1:exon
so has part: feature:610053-610125:-1:exon
so has part: feature:609877-609945:-1:exon
so has part: feature:609722-609790:-1:exon
so has part: feature:609511-609632:-1:exon
so has part: feature:608327-608516:-1:exon
so has part: feature:608061-608246:-1:exon
so has part: feature:607935-607986:-1:exon
so has part: feature:607742-607859:-1:exon
so has part: feature:607573-607653:-1:exon
so has part: feature:607126-607300:-1:exon

XP_010721031.2
type: Protein
SIO_000068: ncbiprotein

position:607126:-1
position: 607126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611021:-1
position: 611021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:610889-611021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:610739-610820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:610585-610660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:610395-610520:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:610237-610283:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:610053-610125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:609877-609945:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:609722-609790:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:609511-609632:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:608327-608516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:608061-608246:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:607935-607986:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:607742-607859:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:607573-607653:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:607126-607300:-1:exon

RPL22
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RPL22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <612623..614889
location: region:612623-614889:1
so has part: feature:612623-614889:1:exon
subclass of: SO_0000010

100547908
type: Gene
SIO_000068: ncbigene

position:612623:1
position: 612623
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:614889:1
position: 614889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612623-614889:1:exon

RPL22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RPL22
product: ribosomal protein L22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003212198.3
SIO_010081: RPL22
subclass of: SO_0000673
so part of: RPL22
location: join(<612623..612805,613472..613596,614687..614889)
location: region:612623-614889:1
so has part: feature:612623-612805:1:exon
so has part: feature:613472-613596:1:exon
so has part: feature:614687-614889:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:612623-612805:1:exon

position:612805:1
position: 612805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:613472-613596:1:exon

position:613472:1
position: 613472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613596:1
position: 613596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:614687-614889:1:exon

position:614687:1
position: 614687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPL22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RPL22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L22
translation: PHPVPFVCPRFLPRRPSRLFSLPVPQKKPAAKGGKKKKQVLKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYFQINQDEEEEEEED
SIO_010081: RPL22
subclass of: SO_0000673
so part of: RPL22
location: join(<612623..612805,613472..613596,614687..614831)
location: region:612623-614831:1
so has part: feature:612623-612805:1:exon
so has part: feature:613472-613596:1:exon
so has part: feature:614687-614831:1:exon

XP_003212246.3
type: Protein
SIO_000068: ncbiprotein

position:614831:1
position: 614831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:612623-612805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:613472-613596:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:614687-614831:1:exon

CHD5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CHD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <615015..641790
location: region:615015-641790:1
so has part: feature:615015-641790:1:exon
subclass of: SO_0000010

100548061
type: Gene
SIO_000068: ncbigene

position:615015:1
position: 615015
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:641790:1
position: 641790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615015-641790:1:exon

CHD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CHD5
product: chromodomain helicase DNA binding protein 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_031556625.1
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(<615015..615232,618578..618754,619525..619643,620185..620423,620636..620760,622429..622552,623879..624045,624345..624563,625410..625616,625693..625904,626803..626934,627529..627637,628157..628348,628427..628627,629016..629153,629645..629766,630165..630338,630771..630912,631100..631231,631708..631825,632301..632425,633229..633460,633549..633674,633786..633958,634891..635065,635392..635484,635905..635993,636145..636278,636443..636587,637785..637944,638098..638177,638331..638460,638998..639087,639465..639599,639764..639872,640037..640169,640545..640740,640947..641110,641217..641331,641435..641790)
location: region:615015-641790:1
so has part: feature:615015-615232:1:exon
so has part: feature:618578-618754:1:exon
so has part: feature:619525-619643:1:exon
so has part: feature:620185-620423:1:exon
so has part: feature:620636-620760:1:exon
so has part: feature:622429-622552:1:exon
so has part: feature:623879-624045:1:exon
so has part: feature:624345-624563:1:exon
so has part: feature:625410-625616:1:exon
so has part: feature:625693-625904:1:exon
so has part: feature:626803-626934:1:exon
so has part: feature:627529-627637:1:exon
so has part: feature:628157-628348:1:exon
so has part: feature:628427-628627:1:exon
so has part: feature:629016-629153:1:exon
so has part: feature:629645-629766:1:exon
so has part: feature:630165-630338:1:exon
so has part: feature:630771-630912:1:exon
so has part: feature:631100-631231:1:exon
so has part: feature:631708-631825:1:exon
so has part: feature:632301-632425:1:exon
so has part: feature:633229-633460:1:exon
so has part: feature:633549-633674:1:exon
so has part: feature:633786-633958:1:exon
so has part: feature:634891-635065:1:exon
so has part: feature:635392-635484:1:exon
so has part: feature:635905-635993:1:exon
so has part: feature:636145-636278:1:exon
so has part: feature:636443-636587:1:exon
so has part: feature:637785-637944:1:exon
so has part: feature:638098-638177:1:exon
so has part: feature:638331-638460:1:exon
so has part: feature:638998-639087:1:exon
so has part: feature:639465-639599:1:exon
so has part: feature:639764-639872:1:exon
so has part: feature:640037-640169:1:exon
so has part: feature:640545-640740:1:exon
so has part: feature:640947-641110:1:exon
so has part: feature:641217-641331:1:exon
so has part: feature:641435-641790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615015-615232:1:exon

position:615232:1
position: 615232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618754:1:exon

position:618578:1
position: 618578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618754:1
position: 618754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:619525-619643:1:exon

position:619525:1
position: 619525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619643:1
position: 619643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:620185-620423:1:exon

position:620185:1
position: 620185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620423:1
position: 620423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:620636-620760:1:exon

position:620636:1
position: 620636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620760:1
position: 620760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:622429-622552:1:exon

position:622429:1
position: 622429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622552:1
position: 622552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:623879-624045:1:exon

position:623879:1
position: 623879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624045:1
position: 624045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:624345-624563:1:exon

position:624345:1
position: 624345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624563:1
position: 624563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:625410-625616:1:exon

position:625410:1
position: 625410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625616:1
position: 625616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:625693-625904:1:exon

position:625693:1
position: 625693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625904:1
position: 625904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:626803-626934:1:exon

position:626803:1
position: 626803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:626934:1
position: 626934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:627529-627637:1:exon

position:627529:1
position: 627529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627637:1
position: 627637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:628157-628348:1:exon

position:628157:1
position: 628157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628348:1
position: 628348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:628427-628627:1:exon

position:628427:1
position: 628427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628627:1
position: 628627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:629016-629153:1:exon

position:629016:1
position: 629016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629153:1
position: 629153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:629645-629766:1:exon

position:629645:1
position: 629645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629766:1
position: 629766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:630165-630338:1:exon

position:630165:1
position: 630165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630338:1
position: 630338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:630771-630912:1:exon

position:630771:1
position: 630771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630912:1
position: 630912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:631100-631231:1:exon

position:631100:1
position: 631100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631231:1
position: 631231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:631708-631825:1:exon

position:631708:1
position: 631708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631825:1
position: 631825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:632301-632425:1:exon

position:632301:1
position: 632301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632425:1
position: 632425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:633229-633460:1:exon

position:633229:1
position: 633229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633460:1
position: 633460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:633549-633674:1:exon

position:633549:1
position: 633549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633674:1
position: 633674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:633786-633958:1:exon

position:633786:1
position: 633786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633958:1
position: 633958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:634891-635065:1:exon

position:634891:1
position: 634891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635065:1
position: 635065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:635392-635484:1:exon

position:635392:1
position: 635392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635484:1
position: 635484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:635905-635993:1:exon

position:635905:1
position: 635905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635993:1
position: 635993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:636145-636278:1:exon

position:636145:1
position: 636145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636278:1
position: 636278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:636443-636587:1:exon

position:636443:1
position: 636443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636587:1
position: 636587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:637785-637944:1:exon

position:637785:1
position: 637785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:637944:1
position: 637944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:638098-638177:1:exon

position:638098:1
position: 638098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638177:1
position: 638177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:638331-638460:1:exon

position:638331:1
position: 638331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638460:1
position: 638460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:638998-639087:1:exon

position:638998:1
position: 638998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639087:1
position: 639087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:639465-639599:1:exon

position:639465:1
position: 639465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639599:1
position: 639599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:639764-639872:1:exon

position:639764:1
position: 639764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639872:1
position: 639872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:640037-640169:1:exon

position:640037:1
position: 640037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640169:1
position: 640169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:640545-640740:1:exon

position:640545:1
position: 640545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640740:1
position: 640740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:640947-641110:1:exon

position:640947:1
position: 640947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641110:1
position: 641110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:641217-641331:1:exon

position:641217:1
position: 641217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641331:1
position: 641331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:641435-641790:1:exon

position:641435:1
position: 641435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CHD5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 5
translation: AERLRVCAGRAKPSCAWGGRPRELSFSSSEDDDGVLEGLEEFFAEEQVAAEKKKCKKLKDGKAAKIKRRKKEGSNDEISDNDEEIEEKSESEGSDYSPNKKKKKKLKEKKEKKNKRKKKDEEEDDDDGGLKEPKSSAQLMEEWGLDDVDYIFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTVAPPLAASPQQPALPPVIRKAKTKEGKGPGVKKKIKSSKDGKKKGKGKKMAGLKFRFGGIPSKRKKGSSSEEEEREESDFDSASINSSSVRSECSAGLGKRGKRRRKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEDEEEEGGEEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAPLPSALPAPDAELALPLPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPHYAKMEERFYRYGIKPEWMMIHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDEIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMVSQGQRLTMPDAVTPFSDTPSTKGGAVTPGMKKKHGGTPPGDNKDVDDSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDMILEGPESKKCSEMVSSDPNTPVPASPAHVHAGPLALAEKTDPPLGFQEEKDQVEQKSRRASDSQVPGSTEKVEKEEYQENCESKEKLKEEKQDESEKAEPSPEPLGKDEGVQEKEKALEKPESNSSPGKGEDKEVKPEDTKVEEKEQSETQQNGDKEEEDGKKDDRNVNFRFMFNIADGGFTELHTLWQNEERAAISSSKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTTRGGEPPVQQGSFGSSQIYNNSFGPNFRGPGPGGIVNYSQMPLGPYVTDI
SIO_010081: CHD5
subclass of: SO_0000673
so part of: CHD5
location: join(<615015..615232,618578..618754,619525..619643,620185..620423,620636..620760,622429..622552,623879..624045,624345..624563,625410..625616,625693..625904,626803..626934,627529..627637,628157..628348,628427..628627,629016..629153,629645..629766,630165..630338,630771..630912,631100..631231,631708..631825,632301..632425,633229..633460,633549..633674,633786..633958,634891..635065,635392..635484,635905..635993,636145..636278,636443..636587,637785..637944,638098..638177,638331..638460,638998..639087,639465..639599,639764..639872,640037..640169,640545..640740,640947..641110,641217..641331,641435..641442)
location: region:615015-641442:1
so has part: feature:615015-615232:1:exon
so has part: feature:618578-618754:1:exon
so has part: feature:619525-619643:1:exon
so has part: feature:620185-620423:1:exon
so has part: feature:620636-620760:1:exon
so has part: feature:622429-622552:1:exon
so has part: feature:623879-624045:1:exon
so has part: feature:624345-624563:1:exon
so has part: feature:625410-625616:1:exon
so has part: feature:625693-625904:1:exon
so has part: feature:626803-626934:1:exon
so has part: feature:627529-627637:1:exon
so has part: feature:628157-628348:1:exon
so has part: feature:628427-628627:1:exon
so has part: feature:629016-629153:1:exon
so has part: feature:629645-629766:1:exon
so has part: feature:630165-630338:1:exon
so has part: feature:630771-630912:1:exon
so has part: feature:631100-631231:1:exon
so has part: feature:631708-631825:1:exon
so has part: feature:632301-632425:1:exon
so has part: feature:633229-633460:1:exon
so has part: feature:633549-633674:1:exon
so has part: feature:633786-633958:1:exon
so has part: feature:634891-635065:1:exon
so has part: feature:635392-635484:1:exon
so has part: feature:635905-635993:1:exon
so has part: feature:636145-636278:1:exon
so has part: feature:636443-636587:1:exon
so has part: feature:637785-637944:1:exon
so has part: feature:638098-638177:1:exon
so has part: feature:638331-638460:1:exon
so has part: feature:638998-639087:1:exon
so has part: feature:639465-639599:1:exon
so has part: feature:639764-639872:1:exon
so has part: feature:640037-640169:1:exon
so has part: feature:640545-640740:1:exon
so has part: feature:640947-641110:1:exon
so has part: feature:641217-641331:1:exon
so has part: feature:641435-641442:1:exon

XP_031412485.1
type: Protein
SIO_000068: ncbiprotein

position:641442:1
position: 641442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:615015-615232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618578-618754:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619525-619643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:620185-620423:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620636-620760:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:622429-622552:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:623879-624045:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:624345-624563:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:625410-625616:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:625693-625904:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:626803-626934:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:627529-627637:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:628157-628348:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:628427-628627:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:629016-629153:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:629645-629766:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:630165-630338:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:630771-630912:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:631100-631231:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:631708-631825:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:632301-632425:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:633229-633460:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:633549-633674:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:633786-633958:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:634891-635065:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:635392-635484:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:635905-635993:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:636145-636278:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:636443-636587:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:637785-637944:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:638098-638177:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:638331-638460:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:638998-639087:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:639465-639599:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:639764-639872:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:640037-640169:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:640545-640740:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:640947-641110:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:641217-641331:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:641435-641442:1:exon

KCNAB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KCNAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(641809..656497)
location: region:641809-656497:-1
so has part: feature:641809-656497:-1:exon
subclass of: SO_0000010

100548213
type: Gene
SIO_000068: ncbigene

position:641809:-1
position: 641809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656497:-1
position: 656497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:641809-656497:-1:exon

KCNAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCNAB2
product: potassium voltage-gated channel subfamily A regulatory beta subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 146 samples with support for all annotated introns
transcript id: XM_010722708.2
SIO_010081: KCNAB2
subclass of: SO_0000673
so part of: KCNAB2
location: complement(join(641809..643654,643779..643867,643937..644057,644137..644231,644474..644594,644688..644773,646577..646663,646732..646775,646849..646893,647299..647343,648348..648427,648535..648572,648695..648738,656379..656497))
location: region:641809-656497:-1
so has part: feature:656379-656497:-1:exon
so has part: feature:648695-648738:-1:exon
so has part: feature:648535-648572:-1:exon
so has part: feature:648348-648427:-1:exon
so has part: feature:647299-647343:-1:exon
so has part: feature:646849-646893:-1:exon
so has part: feature:646732-646775:-1:exon
so has part: feature:646577-646663:-1:exon
so has part: feature:644688-644773:-1:exon
so has part: feature:644474-644594:-1:exon
so has part: feature:644137-644231:-1:exon
so has part: feature:643937-644057:-1:exon
so has part: feature:643779-643867:-1:exon
so has part: feature:641809-643654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656379-656497:-1:exon

position:656379:-1
position: 656379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648695-648738:-1:exon

position:648695:-1
position: 648695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648738:-1
position: 648738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:648535-648572:-1:exon

position:648535:-1
position: 648535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648572:-1
position: 648572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:648348-648427:-1:exon

position:648348:-1
position: 648348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648427:-1
position: 648427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:647299-647343:-1:exon

position:647299:-1
position: 647299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:647343:-1
position: 647343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:646849-646893:-1:exon

position:646849:-1
position: 646849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646893:-1
position: 646893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:646732-646775:-1:exon

position:646732:-1
position: 646732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646775:-1
position: 646775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:646577-646663:-1:exon

position:646577:-1
position: 646577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:646663:-1
position: 646663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:644688-644773:-1:exon

position:644688:-1
position: 644688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644773:-1
position: 644773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:644474-644594:-1:exon

position:644474:-1
position: 644474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644594:-1
position: 644594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:644137-644231:-1:exon

position:644137:-1
position: 644137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644231:-1
position: 644231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:643937-644057:-1:exon

position:643937:-1
position: 643937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644057:-1
position: 644057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:643779-643867:-1:exon

position:643779:-1
position: 643779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643867:-1
position: 643867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:641809-643654:-1:exon

position:643654:-1
position: 643654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCNAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCNAB2
product: potassium voltage-gated channel subfamily A regulatory beta subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XM_010722707.2
SIO_010081: KCNAB2
subclass of: SO_0000673
so part of: KCNAB2
location: complement(join(641809..643654,643779..643867,643937..644057,644137..644231,644474..644594,644688..644773,646577..646663,646732..646775,646849..646893,647299..647343,648348..648427,648535..648572,648695..648738,656137..656178,656379..656497))
location: region:641809-656497:-1
so has part: feature:656379-656497:-1:exon
so has part: feature:656137-656178:-1:exon
so has part: feature:648695-648738:-1:exon
so has part: feature:648535-648572:-1:exon
so has part: feature:648348-648427:-1:exon
so has part: feature:647299-647343:-1:exon
so has part: feature:646849-646893:-1:exon
so has part: feature:646732-646775:-1:exon
so has part: feature:646577-646663:-1:exon
so has part: feature:644688-644773:-1:exon
so has part: feature:644474-644594:-1:exon
so has part: feature:644137-644231:-1:exon
so has part: feature:643937-644057:-1:exon
so has part: feature:643779-643867:-1:exon
so has part: feature:641809-643654:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656379-656497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656137-656178:-1:exon

position:656137:-1
position: 656137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656178:-1
position: 656178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:648695-648738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648535-648572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648348-648427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647299-647343:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:646849-646893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:646732-646775:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:646577-646663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:644688-644773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:644474-644594:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:644137-644231:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:643937-644057:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:643779-643867:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:641809-643654:-1:exon

KCNAB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCNAB2
product: potassium voltage-gated channel subfamily A regulatory beta subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_010722706.2
SIO_010081: KCNAB2
subclass of: SO_0000673
so part of: KCNAB2
location: complement(join(641809..643654,643779..643867,643937..644057,644137..644231,644474..644594,644688..644773,646577..646663,646732..646775,646849..646893,647299..647343,648348..648427,648535..648572,648695..648738,650701..650950))
location: region:641809-650950:-1
so has part: feature:650701-650950:-1:exon
so has part: feature:648695-648738:-1:exon
so has part: feature:648535-648572:-1:exon
so has part: feature:648348-648427:-1:exon
so has part: feature:647299-647343:-1:exon
so has part: feature:646849-646893:-1:exon
so has part: feature:646732-646775:-1:exon
so has part: feature:646577-646663:-1:exon
so has part: feature:644688-644773:-1:exon
so has part: feature:644474-644594:-1:exon
so has part: feature:644137-644231:-1:exon
so has part: feature:643937-644057:-1:exon
so has part: feature:643779-643867:-1:exon
so has part: feature:641809-643654:-1:exon

position:650950:-1
position: 650950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650701-650950:-1:exon

position:650701:-1
position: 650701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:648695-648738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648535-648572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648348-648427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647299-647343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646849-646893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:646732-646775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:646577-646663:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:644688-644773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:644474-644594:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:644137-644231:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:643937-644057:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:643779-643867:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:641809-643654:-1:exon

KCNAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCNAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-gated potassium channel subunit beta-2 isoform X2
translation: MYPESTTDSPARLSLRQTGSPGMIYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDGGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDYRS
SIO_010081: KCNAB2
subclass of: SO_0000673
so part of: KCNAB2
location: complement(join(643565..643654,643779..643867,643937..644057,644137..644231,644474..644594,644688..644773,646577..646663,646732..646775,646849..646893,647299..647343,648348..648427,648535..648572,648695..648738,656379..656455))
location: region:643565-656455:-1
so has part: feature:656379-656455:-1:exon
so has part: feature:648695-648738:-1:exon
so has part: feature:648535-648572:-1:exon
so has part: feature:648348-648427:-1:exon
so has part: feature:647299-647343:-1:exon
so has part: feature:646849-646893:-1:exon
so has part: feature:646732-646775:-1:exon
so has part: feature:646577-646663:-1:exon
so has part: feature:644688-644773:-1:exon
so has part: feature:644474-644594:-1:exon
so has part: feature:644137-644231:-1:exon
so has part: feature:643937-644057:-1:exon
so has part: feature:643779-643867:-1:exon
so has part: feature:643565-643654:-1:exon

XP_010721010.1
type: Protein
SIO_000068: ncbiprotein

position:643565:-1
position: 643565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656455:-1
position: 656455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656379-656455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648695-648738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648535-648572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648348-648427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647299-647343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646849-646893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:646732-646775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:646577-646663:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:644688-644773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:644474-644594:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:644137-644231:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:643937-644057:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:643779-643867:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:643565-643654:-1:exon

KCNAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCNAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-gated potassium channel subunit beta-2 isoform X1
translation: MYPESTTDSPARLSLRQTGSPGMIYSARYGSPKRQLQFYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDGGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDYRS
SIO_010081: KCNAB2
subclass of: SO_0000673
so part of: KCNAB2
location: complement(join(643565..643654,643779..643867,643937..644057,644137..644231,644474..644594,644688..644773,646577..646663,646732..646775,646849..646893,647299..647343,648348..648427,648535..648572,648695..648738,656137..656178,656379..656455))
location: region:643565-656455:-1
so has part: feature:656379-656455:-1:exon
so has part: feature:656137-656178:-1:exon
so has part: feature:648695-648738:-1:exon
so has part: feature:648535-648572:-1:exon
so has part: feature:648348-648427:-1:exon
so has part: feature:647299-647343:-1:exon
so has part: feature:646849-646893:-1:exon
so has part: feature:646732-646775:-1:exon
so has part: feature:646577-646663:-1:exon
so has part: feature:644688-644773:-1:exon
so has part: feature:644474-644594:-1:exon
so has part: feature:644137-644231:-1:exon
so has part: feature:643937-644057:-1:exon
so has part: feature:643779-643867:-1:exon
so has part: feature:643565-643654:-1:exon

XP_010721009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:656379-656455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656137-656178:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648695-648738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648535-648572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:648348-648427:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:647299-647343:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:646849-646893:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:646732-646775:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:646577-646663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:644688-644773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:644474-644594:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:644137-644231:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:643937-644057:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:643779-643867:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:643565-643654:-1:exon

KCNAB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCNAB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-gated potassium channel subunit beta-2 isoform X3
translation: MQVSFVCSEHSIKSRSAEDRLNRQNASSPSLGTRSKFRAVAMVARSLGQLSVQNAPSSSESSIKQPGMKYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLDYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDGGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIVHEIDSILGNKPYSKKDYRS
SIO_010081: KCNAB2
subclass of: SO_0000673
so part of: KCNAB2
location: complement(join(643565..643654,643779..643867,643937..644057,644137..644231,644474..644594,644688..644773,646577..646663,646732..646775,646849..646893,647299..647343,648348..648427,648535..648572,648695..648738,650701..650912))
location: region:643565-650912:-1
so has part: feature:650701-650912:-1:exon
so has part: feature:648695-648738:-1:exon
so has part: feature:648535-648572:-1:exon
so has part: feature:648348-648427:-1:exon
so has part: feature:647299-647343:-1:exon
so has part: feature:646849-646893:-1:exon
so has part: feature:646732-646775:-1:exon
so has part: feature:646577-646663:-1:exon
so has part: feature:644688-644773:-1:exon
so has part: feature:644474-644594:-1:exon
so has part: feature:644137-644231:-1:exon
so has part: feature:643937-644057:-1:exon
so has part: feature:643779-643867:-1:exon
so has part: feature:643565-643654:-1:exon

XP_010721008.1
type: Protein
SIO_000068: ncbiprotein

position:650912:-1
position: 650912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650701-650912:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:648695-648738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:648535-648572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:648348-648427:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:647299-647343:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646849-646893:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:646732-646775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:646577-646663:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:644688-644773:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:644474-644594:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:644137-644231:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:643937-644057:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:643779-643867:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:643565-643654:-1:exon

NPHP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NPHP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 663105..683588
location: region:663105-683588:1
so has part: feature:663105-683588:1:exon
subclass of: SO_0000010

100548366
type: Gene
SIO_000068: ncbigene

position:663105:1
position: 663105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683588:1
position: 683588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663105-683588:1:exon

NPHP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NPHP4
product: nephrocystin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_010722709.3
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(663105..663320,663843..663980,665375..665547,665621..665685,666317..666472,667361..667497,667912..668060,668139..668253,669739..669921,670018..670144,672147..672193,673020..673279,673371..673556,674134..674321,675169..675329,675888..676056,677265..677375,677471..677670,677739..677956,678133..678322,678437..678517,678660..678816,679112..679197,679991..680076,680399..680570,681542..681721,682798..682941,683025..683588)
location: region:663105-683588:1
so has part: feature:663105-663320:1:exon
so has part: feature:663843-663980:1:exon
so has part: feature:665375-665547:1:exon
so has part: feature:665621-665685:1:exon
so has part: feature:666317-666472:1:exon
so has part: feature:667361-667497:1:exon
so has part: feature:667912-668060:1:exon
so has part: feature:668139-668253:1:exon
so has part: feature:669739-669921:1:exon
so has part: feature:670018-670144:1:exon
so has part: feature:672147-672193:1:exon
so has part: feature:673020-673279:1:exon
so has part: feature:673371-673556:1:exon
so has part: feature:674134-674321:1:exon
so has part: feature:675169-675329:1:exon
so has part: feature:675888-676056:1:exon
so has part: feature:677265-677375:1:exon
so has part: feature:677471-677670:1:exon
so has part: feature:677739-677956:1:exon
so has part: feature:678133-678322:1:exon
so has part: feature:678437-678517:1:exon
so has part: feature:678660-678816:1:exon
so has part: feature:679112-679197:1:exon
so has part: feature:679991-680076:1:exon
so has part: feature:680399-680570:1:exon
so has part: feature:681542-681721:1:exon
so has part: feature:682798-682941:1:exon
so has part: feature:683025-683588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663105-663320:1:exon

position:663320:1
position: 663320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663843-663980:1:exon

position:663843:1
position: 663843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663980:1
position: 663980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665375-665547:1:exon

position:665375:1
position: 665375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665547:1
position: 665547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:665621-665685:1:exon

position:665621:1
position: 665621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665685:1
position: 665685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:666317-666472:1:exon

position:666317:1
position: 666317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666472:1
position: 666472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:667361-667497:1:exon

position:667361:1
position: 667361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:667497:1
position: 667497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:667912-668060:1:exon

position:667912:1
position: 667912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668060:1
position: 668060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:668139-668253:1:exon

position:668139:1
position: 668139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668253:1
position: 668253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:669739-669921:1:exon

position:669739:1
position: 669739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669921:1
position: 669921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:670018-670144:1:exon

position:670018:1
position: 670018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670144:1
position: 670144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:672147-672193:1:exon

position:672147:1
position: 672147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672193:1
position: 672193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:673020-673279:1:exon

position:673020:1
position: 673020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673279:1
position: 673279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:673371-673556:1:exon

position:673371:1
position: 673371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673556:1
position: 673556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:674134-674321:1:exon

position:674134:1
position: 674134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674321:1
position: 674321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:675169-675329:1:exon

position:675169:1
position: 675169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675329:1
position: 675329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:675888-676056:1:exon

position:675888:1
position: 675888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676056:1
position: 676056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:677265-677375:1:exon

position:677265:1
position: 677265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677375:1
position: 677375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:677471-677670:1:exon

position:677471:1
position: 677471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677670:1
position: 677670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:677739-677956:1:exon

position:677739:1
position: 677739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677956:1
position: 677956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:678133-678322:1:exon

position:678133:1
position: 678133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678322:1
position: 678322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:678437-678517:1:exon

position:678437:1
position: 678437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678517:1
position: 678517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:678660-678816:1:exon

position:678660:1
position: 678660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678816:1
position: 678816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:679112-679197:1:exon

position:679112:1
position: 679112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679197:1
position: 679197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:679991-680076:1:exon

position:679991:1
position: 679991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680076:1
position: 680076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:680399-680570:1:exon

position:680399:1
position: 680399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680570:1
position: 680570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:681542-681721:1:exon

position:681542:1
position: 681542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681721:1
position: 681721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:682798-682941:1:exon

position:682798:1
position: 682798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:682941:1
position: 682941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:683025-683588:1:exon

position:683025:1
position: 683025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NPHP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NPHP4
product: nephrocystin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_019622444.2
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(663105..663320,663843..663980,665375..665547,665621..665685,666317..666472,667361..667497,667915..668060,668139..668253,669739..669921,670018..670144,672147..672193,673020..673279,673371..673556,674134..674321,675169..675329,675888..676056,677265..677375,677471..677670,677739..677956,678133..678322,678437..678517,678660..678816,679112..679197,679991..680076,680399..680570,681542..681721,682798..682941,683025..683588)
location: region:663105-683588:1
so has part: feature:663105-663320:1:exon
so has part: feature:663843-663980:1:exon
so has part: feature:665375-665547:1:exon
so has part: feature:665621-665685:1:exon
so has part: feature:666317-666472:1:exon
so has part: feature:667361-667497:1:exon
so has part: feature:667915-668060:1:exon
so has part: feature:668139-668253:1:exon
so has part: feature:669739-669921:1:exon
so has part: feature:670018-670144:1:exon
so has part: feature:672147-672193:1:exon
so has part: feature:673020-673279:1:exon
so has part: feature:673371-673556:1:exon
so has part: feature:674134-674321:1:exon
so has part: feature:675169-675329:1:exon
so has part: feature:675888-676056:1:exon
so has part: feature:677265-677375:1:exon
so has part: feature:677471-677670:1:exon
so has part: feature:677739-677956:1:exon
so has part: feature:678133-678322:1:exon
so has part: feature:678437-678517:1:exon
so has part: feature:678660-678816:1:exon
so has part: feature:679112-679197:1:exon
so has part: feature:679991-680076:1:exon
so has part: feature:680399-680570:1:exon
so has part: feature:681542-681721:1:exon
so has part: feature:682798-682941:1:exon
so has part: feature:683025-683588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663105-663320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663843-663980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665375-665547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665621-665685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666317-666472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667361-667497:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667915-668060:1:exon

position:667915:1
position: 667915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:668139-668253:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:669739-669921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670018-670144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:672147-672193:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:673020-673279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:673371-673556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:674134-674321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:675169-675329:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:675888-676056:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:677265-677375:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:677471-677670:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:677739-677956:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:678133-678322:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:678437-678517:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:678660-678816:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:679112-679197:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:679991-680076:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:680399-680570:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:681542-681721:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:682798-682941:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:683025-683588:1:exon

NPHP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NPHP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-4 isoform X1
translation: MAEWERLFAQSRAVPPHTQRRHGVPERSVPFQCVLKCLEGSVVTQQSPAELQLRLSLFDAAHRHFFGHTWHSSTRTPRSPPGQPPRVLFNEAVYFHTSLSHPSITAVVEVVAVAPTPEGISRDVSCGFGLIPLFDSRREPSDLAARGRVLKLYHGTPRALLHPLLQDPLEKNKYMTMMENSHLQYTLKLHPPLEKVFHLLPENLLVSGLQKIPGLLPAHGDTGDIFLKPRLMGTVPCYLDQLCVLLHPSLEEFEEELLEQLHSDRLLKQEVGSALCVQERRLRVGVHNGLRFVQAPQVAVLQPAAEAARRQTTNPTDSAAEQALLLRSRLQLSEMVAHPAFGVCFQLEYVVCAAAKAAAGSVLGPAAAMHTVRWALWSPFLGATSSPVLLPLRGGAHPSPGQTLVYRNPADSESSQQVKRIASGSVQFHVSTDAEHRVTSTDISSKAGKEPEEPPTPSLSLRSPPRPAASTQGPGLSLSQLLASPQSRDERAVPRSRSAPKPRPCSTQKDGGTQHTAGITHLEADLWSGSPRVDASSSEHLRALPFVPAQLPVTAVGPPAGSAALSRASLALLHTSGFPEILDDNKEPVEVTEPLNPAHFSPRLEEVDALQSNEIILQFLAFSRAPQDALEGMWPSTVFLTFQFYRFPPVTTPRLQLLDADGERAVGSAVPAQVLLQLNKDGTPNTEAPGLQLRYVVDPSFLRPGEQRVFVRYLAEHSLQMDVWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVVTTEYEQDAPPAAGRDVLCPLGARVAVRGRLHLCLANVGHRCEETPVSPRHPLLSHTHVVSSPGGGCLLSLHASGNVRVSRARRLAEVDSELAAILCSHRLEKSPEPLHAPHEAAAIQQHKMQRLAALQQQEDADWRTPQRMGCCEQCMQYLQIIDAYRERTKHRYISQMLSQAITITHTVYAMLGTAEFFEFALKNPYSVQHTVTVEVDHPELSVILDPREWRHFKELTQTATPLEEDMFHLRDDLRPQIYLRPKETVHIPFRFQMFSAEPAVAAVLGPVGLSKEEDAGRMQEEPRAAQMRLIQVAFRVSGGKPIALLQVKVEPRPHVVDQTFRFFHPELTFLKKAFRLPPWHTLPGAPVRMPGGDPEVYVRCSDPNVICETKNMGPGEPQDVFLKVAGGPSPQIKTFFVAIYTDPWLATPLHIWQFYLHSLQRLDVSCTAGQLSRLAVPLRGTRTLRRVKAFCSHPHELKVDPAGVFTLPPNGVLDLFVGVRPRRAGSRFFYLNLVDVECHQLVSSWLLCVTCRQPLISKAFEITIPAGSGKGSNKRITYTNPYPTRRLYFLVTSRPDLLQFKEDSFQVAGGEVYTIGLRFAPSQSVGEEEILIHINDHQDKNEETFCVKVIYY
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(663186..663320,663843..663980,665375..665547,665621..665685,666317..666472,667361..667497,667912..668060,668139..668253,669739..669921,670018..670144,672147..672193,673020..673279,673371..673556,674134..674321,675169..675329,675888..676056,677265..677375,677471..677670,677739..677956,678133..678322,678437..678517,678660..678816,679112..679197,679991..680076,680399..680570,681542..681721,682798..682941,683025..683165)
location: region:663186-683165:1
so has part: feature:663186-663320:1:exon
so has part: feature:663843-663980:1:exon
so has part: feature:665375-665547:1:exon
so has part: feature:665621-665685:1:exon
so has part: feature:666317-666472:1:exon
so has part: feature:667361-667497:1:exon
so has part: feature:667912-668060:1:exon
so has part: feature:668139-668253:1:exon
so has part: feature:669739-669921:1:exon
so has part: feature:670018-670144:1:exon
so has part: feature:672147-672193:1:exon
so has part: feature:673020-673279:1:exon
so has part: feature:673371-673556:1:exon
so has part: feature:674134-674321:1:exon
so has part: feature:675169-675329:1:exon
so has part: feature:675888-676056:1:exon
so has part: feature:677265-677375:1:exon
so has part: feature:677471-677670:1:exon
so has part: feature:677739-677956:1:exon
so has part: feature:678133-678322:1:exon
so has part: feature:678437-678517:1:exon
so has part: feature:678660-678816:1:exon
so has part: feature:679112-679197:1:exon
so has part: feature:679991-680076:1:exon
so has part: feature:680399-680570:1:exon
so has part: feature:681542-681721:1:exon
so has part: feature:682798-682941:1:exon
so has part: feature:683025-683165:1:exon

XP_010721011.1
type: Protein
SIO_000068: ncbiprotein

position:663186:1
position: 663186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683165:1
position: 683165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663186-663320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663843-663980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665375-665547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665621-665685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666317-666472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667361-667497:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667912-668060:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668139-668253:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:669739-669921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670018-670144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:672147-672193:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:673020-673279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:673371-673556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:674134-674321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:675169-675329:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:675888-676056:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:677265-677375:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:677471-677670:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:677739-677956:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:678133-678322:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:678437-678517:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:678660-678816:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:679112-679197:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:679991-680076:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:680399-680570:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:681542-681721:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:682798-682941:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:683025-683165:1:exon

NPHP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NPHP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-4 isoform X2
translation: MAEWERLFAQSRAVPPHTQRRHGVPERSVPFQCVLKCLEGSVVTQQSPAELQLRLSLFDAAHRHFFGHTWHSSTRTPRSPPGQPPRVLFNEAVYFHTSLSHPSITAVVEVVAVAPTPEGISRDVSCGFGLIPLFDSRREPSDLAARGRVLKLYHGTPRALLHPLLQDPLEKNKYMTMMENSHLQYTLKLHPPLEKVFHLLPENLLVSGLQKIPGLLPAHGDTGDIFLKPRLMGTVPCYLDQLCVLLHPSLEEFEEELLEQLHSDRLLKEVGSALCVQERRLRVGVHNGLRFVQAPQVAVLQPAAEAARRQTTNPTDSAAEQALLLRSRLQLSEMVAHPAFGVCFQLEYVVCAAAKAAAGSVLGPAAAMHTVRWALWSPFLGATSSPVLLPLRGGAHPSPGQTLVYRNPADSESSQQVKRIASGSVQFHVSTDAEHRVTSTDISSKAGKEPEEPPTPSLSLRSPPRPAASTQGPGLSLSQLLASPQSRDERAVPRSRSAPKPRPCSTQKDGGTQHTAGITHLEADLWSGSPRVDASSSEHLRALPFVPAQLPVTAVGPPAGSAALSRASLALLHTSGFPEILDDNKEPVEVTEPLNPAHFSPRLEEVDALQSNEIILQFLAFSRAPQDALEGMWPSTVFLTFQFYRFPPVTTPRLQLLDADGERAVGSAVPAQVLLQLNKDGTPNTEAPGLQLRYVVDPSFLRPGEQRVFVRYLAEHSLQMDVWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVVTTEYEQDAPPAAGRDVLCPLGARVAVRGRLHLCLANVGHRCEETPVSPRHPLLSHTHVVSSPGGGCLLSLHASGNVRVSRARRLAEVDSELAAILCSHRLEKSPEPLHAPHEAAAIQQHKMQRLAALQQQEDADWRTPQRMGCCEQCMQYLQIIDAYRERTKHRYISQMLSQAITITHTVYAMLGTAEFFEFALKNPYSVQHTVTVEVDHPELSVILDPREWRHFKELTQTATPLEEDMFHLRDDLRPQIYLRPKETVHIPFRFQMFSAEPAVAAVLGPVGLSKEEDAGRMQEEPRAAQMRLIQVAFRVSGGKPIALLQVKVEPRPHVVDQTFRFFHPELTFLKKAFRLPPWHTLPGAPVRMPGGDPEVYVRCSDPNVICETKNMGPGEPQDVFLKVAGGPSPQIKTFFVAIYTDPWLATPLHIWQFYLHSLQRLDVSCTAGQLSRLAVPLRGTRTLRRVKAFCSHPHELKVDPAGVFTLPPNGVLDLFVGVRPRRAGSRFFYLNLVDVECHQLVSSWLLCVTCRQPLISKAFEITIPAGSGKGSNKRITYTNPYPTRRLYFLVTSRPDLLQFKEDSFQVAGGEVYTIGLRFAPSQSVGEEEILIHINDHQDKNEETFCVKVIYY
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(663186..663320,663843..663980,665375..665547,665621..665685,666317..666472,667361..667497,667915..668060,668139..668253,669739..669921,670018..670144,672147..672193,673020..673279,673371..673556,674134..674321,675169..675329,675888..676056,677265..677375,677471..677670,677739..677956,678133..678322,678437..678517,678660..678816,679112..679197,679991..680076,680399..680570,681542..681721,682798..682941,683025..683165)
location: region:663186-683165:1
so has part: feature:663186-663320:1:exon
so has part: feature:663843-663980:1:exon
so has part: feature:665375-665547:1:exon
so has part: feature:665621-665685:1:exon
so has part: feature:666317-666472:1:exon
so has part: feature:667361-667497:1:exon
so has part: feature:667915-668060:1:exon
so has part: feature:668139-668253:1:exon
so has part: feature:669739-669921:1:exon
so has part: feature:670018-670144:1:exon
so has part: feature:672147-672193:1:exon
so has part: feature:673020-673279:1:exon
so has part: feature:673371-673556:1:exon
so has part: feature:674134-674321:1:exon
so has part: feature:675169-675329:1:exon
so has part: feature:675888-676056:1:exon
so has part: feature:677265-677375:1:exon
so has part: feature:677471-677670:1:exon
so has part: feature:677739-677956:1:exon
so has part: feature:678133-678322:1:exon
so has part: feature:678437-678517:1:exon
so has part: feature:678660-678816:1:exon
so has part: feature:679112-679197:1:exon
so has part: feature:679991-680076:1:exon
so has part: feature:680399-680570:1:exon
so has part: feature:681542-681721:1:exon
so has part: feature:682798-682941:1:exon
so has part: feature:683025-683165:1:exon

XP_019477989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:663186-663320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663843-663980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665375-665547:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665621-665685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666317-666472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667361-667497:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667915-668060:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:668139-668253:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:669739-669921:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:670018-670144:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:672147-672193:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:673020-673279:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:673371-673556:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:674134-674321:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:675169-675329:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:675888-676056:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:677265-677375:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:677471-677670:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:677739-677956:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:678133-678322:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:678437-678517:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:678660-678816:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:679112-679197:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:679991-680076:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:680399-680570:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:681542-681721:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:682798-682941:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:683025-683165:1:exon

NPHP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NPHP4
product: nephrocystin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010722710.3
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(663227..663320,663843..663980,665621..665685,666317..666472,667361..667497,667912..668060,668139..668253,669739..669921,670018..670144,672147..672193,673020..673279,673371..673556,674134..674321,675169..675329,675888..676056,677265..677375,677471..677670,677739..677956,678133..678322,678437..678517,678660..678816,679112..679197,679991..680076,680399..680570,681542..681721,682798..682941,683025..683588)
location: region:663227-683588:1
so has part: feature:663227-663320:1:exon
so has part: feature:663843-663980:1:exon
so has part: feature:665621-665685:1:exon
so has part: feature:666317-666472:1:exon
so has part: feature:667361-667497:1:exon
so has part: feature:667912-668060:1:exon
so has part: feature:668139-668253:1:exon
so has part: feature:669739-669921:1:exon
so has part: feature:670018-670144:1:exon
so has part: feature:672147-672193:1:exon
so has part: feature:673020-673279:1:exon
so has part: feature:673371-673556:1:exon
so has part: feature:674134-674321:1:exon
so has part: feature:675169-675329:1:exon
so has part: feature:675888-676056:1:exon
so has part: feature:677265-677375:1:exon
so has part: feature:677471-677670:1:exon
so has part: feature:677739-677956:1:exon
so has part: feature:678133-678322:1:exon
so has part: feature:678437-678517:1:exon
so has part: feature:678660-678816:1:exon
so has part: feature:679112-679197:1:exon
so has part: feature:679991-680076:1:exon
so has part: feature:680399-680570:1:exon
so has part: feature:681542-681721:1:exon
so has part: feature:682798-682941:1:exon
so has part: feature:683025-683588:1:exon

position:663227:1
position: 663227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663227-663320:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663843-663980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665621-665685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:666317-666472:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667361-667497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:667912-668060:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:668139-668253:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:669739-669921:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:670018-670144:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:672147-672193:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:673020-673279:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:673371-673556:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:674134-674321:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:675169-675329:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:675888-676056:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:677265-677375:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:677471-677670:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:677739-677956:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:678133-678322:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:678437-678517:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:678660-678816:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:679112-679197:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:679991-680076:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:680399-680570:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:681542-681721:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:682798-682941:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:683025-683588:1:exon

NPHP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NPHP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nephrocystin-4 isoform X3
translation: MPPTATSLATRGTAAPGPPAAPQGSPPVCSSMRLKLYHGTPRALLHPLLQDPLEKNKYMTMMENSHLQYTLKLHPPLEKVFHLLPENLLVSGLQKIPGLLPAHGDTGDIFLKPRLMGTVPCYLDQLCVLLHPSLEEFEEELLEQLHSDRLLKQEVGSALCVQERRLRVGVHNGLRFVQAPQVAVLQPAAEAARRQTTNPTDSAAEQALLLRSRLQLSEMVAHPAFGVCFQLEYVVCAAAKAAAGSVLGPAAAMHTVRWALWSPFLGATSSPVLLPLRGGAHPSPGQTLVYRNPADSESSQQVKRIASGSVQFHVSTDAEHRVTSTDISSKAGKEPEEPPTPSLSLRSPPRPAASTQGPGLSLSQLLASPQSRDERAVPRSRSAPKPRPCSTQKDGGTQHTAGITHLEADLWSGSPRVDASSSEHLRALPFVPAQLPVTAVGPPAGSAALSRASLALLHTSGFPEILDDNKEPVEVTEPLNPAHFSPRLEEVDALQSNEIILQFLAFSRAPQDALEGMWPSTVFLTFQFYRFPPVTTPRLQLLDADGERAVGSAVPAQVLLQLNKDGTPNTEAPGLQLRYVVDPSFLRPGEQRVFVRYLAEHSLQMDVWDGDSLLLVGSAAVKLKPLLRQGRPAVRTLHELEVVTTEYEQDAPPAAGRDVLCPLGARVAVRGRLHLCLANVGHRCEETPVSPRHPLLSHTHVVSSPGGGCLLSLHASGNVRVSRARRLAEVDSELAAILCSHRLEKSPEPLHAPHEAAAIQQHKMQRLAALQQQEDADWRTPQRMGCCEQCMQYLQIIDAYRERTKHRYISQMLSQAITITHTVYAMLGTAEFFEFALKNPYSVQHTVTVEVDHPELSVILDPREWRHFKELTQTATPLEEDMFHLRDDLRPQIYLRPKETVHIPFRFQMFSAEPAVAAVLGPVGLSKEEDAGRMQEEPRAAQMRLIQVAFRVSGGKPIALLQVKVEPRPHVVDQTFRFFHPELTFLKKAFRLPPWHTLPGAPVRMPGGDPEVYVRCSDPNVICETKNMGPGEPQDVFLKVAGGPSPQIKTFFVAIYTDPWLATPLHIWQFYLHSLQRLDVSCTAGQLSRLAVPLRGTRTLRRVKAFCSHPHELKVDPAGVFTLPPNGVLDLFVGVRPRRAGSRFFYLNLVDVECHQLVSSWLLCVTCRQPLISKAFEITIPAGSGKGSNKRITYTNPYPTRRLYFLVTSRPDLLQFKEDSFQVAGGEVYTIGLRFAPSQSVGEEEILIHINDHQDKNEETFCVKVIYY
SIO_010081: NPHP4
subclass of: SO_0000673
so part of: NPHP4
location: join(663883..663980,665621..665685,666317..666472,667361..667497,667912..668060,668139..668253,669739..669921,670018..670144,672147..672193,673020..673279,673371..673556,674134..674321,675169..675329,675888..676056,677265..677375,677471..677670,677739..677956,678133..678322,678437..678517,678660..678816,679112..679197,679991..680076,680399..680570,681542..681721,682798..682941,683025..683165)
location: region:663883-683165:1
so has part: feature:663883-663980:1:exon
so has part: feature:665621-665685:1:exon
so has part: feature:666317-666472:1:exon
so has part: feature:667361-667497:1:exon
so has part: feature:667912-668060:1:exon
so has part: feature:668139-668253:1:exon
so has part: feature:669739-669921:1:exon
so has part: feature:670018-670144:1:exon
so has part: feature:672147-672193:1:exon
so has part: feature:673020-673279:1:exon
so has part: feature:673371-673556:1:exon
so has part: feature:674134-674321:1:exon
so has part: feature:675169-675329:1:exon
so has part: feature:675888-676056:1:exon
so has part: feature:677265-677375:1:exon
so has part: feature:677471-677670:1:exon
so has part: feature:677739-677956:1:exon
so has part: feature:678133-678322:1:exon
so has part: feature:678437-678517:1:exon
so has part: feature:678660-678816:1:exon
so has part: feature:679112-679197:1:exon
so has part: feature:679991-680076:1:exon
so has part: feature:680399-680570:1:exon
so has part: feature:681542-681721:1:exon
so has part: feature:682798-682941:1:exon
so has part: feature:683025-683165:1:exon

XP_010721012.1
type: Protein
SIO_000068: ncbiprotein

position:663883:1
position: 663883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663883-663980:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:665621-665685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:666317-666472:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:667361-667497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:667912-668060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668139-668253:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:669739-669921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:670018-670144:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:672147-672193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:673020-673279:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:673371-673556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:674134-674321:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:675169-675329:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:675888-676056:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:677265-677375:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:677471-677670:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:677739-677956:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:678133-678322:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:678437-678517:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:678660-678816:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:679112-679197:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:679991-680076:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:680399-680570:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:681542-681721:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:682798-682941:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:683025-683165:1:exon

LOC109370850
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370850
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(749710..768435)
location: region:749710-768435:-1
so has part: feature:749710-768435:-1:exon
subclass of: SO_0000011

109370850
type: Gene
SIO_000068: ncbigene

position:749710:-1
position: 749710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768435:-1
position: 768435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749710-768435:-1:exon

LOC109370850
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370850
product: uncharacterized LOC109370850
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002121305.2
SIO_010081: LOC109370850
subclass of: SO_0000673
so part of: LOC109370850
location: complement(join(749710..751382,752916..753093,767821..768435))
location: region:749710-768435:-1
so has part: feature:767821-768435:-1:exon
so has part: feature:752916-753093:-1:exon
so has part: feature:749710-751382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:767821-768435:-1:exon

position:767821:-1
position: 767821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752916-753093:-1:exon

position:752916:-1
position: 752916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753093:-1
position: 753093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:749710-751382:-1:exon

position:751382:-1
position: 751382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AJAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: AJAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(775885..>794730)
location: region:775885-794730:-1
so has part: feature:775885-794730:-1:exon
subclass of: SO_0000010

104914111
type: Gene
SIO_000068: ncbigene

position:775885:-1
position: 775885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794730:-1
position: 794730
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775885-794730:-1:exon

AJAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: AJAP1
product: adherens junctions associated protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_031556627.1
SIO_010081: AJAP1
subclass of: SO_0000673
so part of: AJAP1
location: complement(join(775885..778222,782068..782197,783143..783385,784317..784404,794112..>794730))
location: region:775885-794730:-1
so has part: feature:794112-794730:-1:exon
so has part: feature:784317-784404:-1:exon
so has part: feature:783143-783385:-1:exon
so has part: feature:782068-782197:-1:exon
so has part: feature:775885-778222:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:794112-794730:-1:exon

position:794112:-1
position: 794112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:784317-784404:-1:exon

position:784317:-1
position: 784317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784404:-1
position: 784404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783143-783385:-1:exon

position:783143:-1
position: 783143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783385:-1
position: 783385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:782068-782197:-1:exon

position:782068:-1
position: 782068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782197:-1
position: 782197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:775885-778222:-1:exon

position:778222:-1
position: 778222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AJAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: AJAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adherens junction-associated protein 1
translation: LRSLWKGLVVLPTLSCFLTCSVSARRSGCPLGSHAWMLIAMFHLAMDLASCEPAGTRLSPRSAQRHRLPRGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGRPTALPEVIVWGPTGEEDSLESSTLPSIFTTAATTTVTTTTAATTAATTVATVPTPSSPAPTPGIEEPRGRPSTSEPAAGHSSGGKDARPPRGLGDTAGLAVHQIITITVSLIMVIAALITTLVLKNCCAQSGAARRNGHQRKITQQEESCQNLTDFTPARVPSSLDIFTAYNETLQCSHECVRTPVPVYTEEALHSPGDYKATFNGNRPSSSDRHLIPVAFVSEKWFEISC
SIO_010081: AJAP1
subclass of: SO_0000673
so part of: AJAP1
location: complement(join(782125..782197,783143..783385,784317..784404,794112..>794730))
location: region:782125-794730:-1
so has part: feature:794112-794730:-1:exon
so has part: feature:784317-784404:-1:exon
so has part: feature:783143-783385:-1:exon
so has part: feature:782125-782197:-1:exon

XP_031412487.1
type: Protein
SIO_000068: ncbiprotein

position:782125:-1
position: 782125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794112-794730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:784317-784404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783143-783385:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:782125-782197:-1:exon

LOC109370851
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(821358..823854)
location: region:821358-823854:-1
so has part: feature:821358-823854:-1:exon
subclass of: SO_0000011

109370851
type: Gene
SIO_000068: ncbigene

position:821358:-1
position: 821358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823854:-1
position: 823854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821358-823854:-1:exon

LOC109370851
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370851
product: uncharacterized LOC109370851
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002121307.1
SIO_010081: LOC109370851
subclass of: SO_0000673
so part of: LOC109370851
location: complement(join(821358..821633,823259..823854))
location: region:821358-823854:-1
so has part: feature:823259-823854:-1:exon
so has part: feature:821358-821633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:823259-823854:-1:exon

position:823259:-1
position: 823259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821358-821633:-1:exon

position:821633:-1
position: 821633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217406
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(841946..846362)
location: region:841946-846362:-1
so has part: feature:841946-846362:-1:exon
subclass of: SO_0000011

116217406
type: Gene
SIO_000068: ncbigene

position:841946:-1
position: 841946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846362:-1
position: 846362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841946-846362:-1:exon

LOC116217406
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217406
product: uncharacterized LOC116217406, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161888.1
SIO_010081: LOC116217406
subclass of: SO_0000673
so part of: LOC116217406
location: complement(join(841946..843813,844961..845053,846280..846362))
location: region:841946-846362:-1
so has part: feature:846280-846362:-1:exon
so has part: feature:844961-845053:-1:exon
so has part: feature:841946-843813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:846280-846362:-1:exon

position:846280:-1
position: 846280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:844961-845053:-1:exon

position:844961:-1
position: 844961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845053:-1
position: 845053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:841946-843813:-1:exon

position:843813:-1
position: 843813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217406
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217406
product: uncharacterized LOC116217406, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004161889.1
SIO_010081: LOC116217406
subclass of: SO_0000673
so part of: LOC116217406
location: complement(join(841946..843813,844143..844274,844961..845153))
location: region:841946-845153:-1
so has part: feature:844961-845153:-1:exon
so has part: feature:844143-844274:-1:exon
so has part: feature:841946-843813:-1:exon

position:845153:-1
position: 845153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:844961-845153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844143-844274:-1:exon

position:844143:-1
position: 844143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844274:-1
position: 844274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:841946-843813:-1:exon

C23H1orf174
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: C23H1orf174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 883891..886526
location: region:883891-886526:1
so has part: feature:883891-886526:1:exon
subclass of: SO_0000010

104914116
type: Gene
SIO_000068: ncbigene

position:883891:1
position: 883891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886526:1
position: 886526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883891-886526:1:exon

C23H1orf174
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: C23H1orf174
product: chromosome 23 C1orf174 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 198 samples with support for all annotated introns
transcript id: XM_019622452.2
SIO_010081: C23H1orf174
subclass of: SO_0000673
so part of: C23H1orf174
location: join(883891..884191,884504..884959,885303..886526)
location: region:883891-886526:1
so has part: feature:883891-884191:1:exon
so has part: feature:884504-884959:1:exon
so has part: feature:885303-886526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:883891-884191:1:exon

position:884191:1
position: 884191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:884504-884959:1:exon

position:884504:1
position: 884504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884959:1
position: 884959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:885303-886526:1:exon

position:885303:1
position: 885303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C23H1orf174
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: C23H1orf174
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0688 protein C1orf174 homolog
translation: MAAGGKARAGAASRAGGGRRRQTCSHKAAGKRPSKRLKCERNSLVKSGLEGCMCGIENPPASKASAEGSTAEGTGDHQVIQLEKSESIPETGTEPCAAKSRSAPSKTESSENLQDRACREEGSSCESLLLEGTSLKDGDIPKKLTELDNSAFLDEDSNQPMPVDRFFGNIDFMQDQLAAVLPSTAMSRREYRRLHFIAKEDEEDEDAL
SIO_010081: C23H1orf174
subclass of: SO_0000673
so part of: C23H1orf174
location: join(884126..884191,884504..884959,885303..885407)
location: region:884126-885407:1
so has part: feature:884126-884191:1:exon
so has part: feature:884504-884959:1:exon
so has part: feature:885303-885407:1:exon

XP_019477997.1
type: Protein
SIO_000068: ncbiprotein

position:884126:1
position: 884126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885407:1
position: 885407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:884126-884191:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884504-884959:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:885303-885407:1:exon

DFFB
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DFFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(887339..>890285)
location: region:887339-890285:-1
so has part: feature:887339-890285:-1:exon
subclass of: SO_0000010

100548517
type: Gene
SIO_000068: ncbigene

position:887339:-1
position: 887339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890285:-1
position: 890285
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:887339-890285:-1:exon

DFFB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DFFB
product: DNA fragmentation factor subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_010722732.3
SIO_010081: DFFB
subclass of: SO_0000673
so part of: DFFB
location: complement(join(887339..888439,888760..888860,889088..889261,889401..889480,890066..>890285))
location: region:887339-890285:-1
so has part: feature:890066-890285:-1:exon
so has part: feature:889401-889480:-1:exon
so has part: feature:889088-889261:-1:exon
so has part: feature:888760-888860:-1:exon
so has part: feature:887339-888439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:890066-890285:-1:exon

position:890066:-1
position: 890066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:889401-889480:-1:exon

position:889401:-1
position: 889401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889480:-1
position: 889480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:889088-889261:-1:exon

position:889088:-1
position: 889088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889261:-1
position: 889261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:888760-888860:-1:exon

position:888760:-1
position: 888760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888860:-1
position: 888860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:887339-888439:-1:exon

position:888439:-1
position: 888439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DFFB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DFFB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA fragmentation factor subunit beta
translation: FRLLKGAPPAGCGDLERFLAALCCRTDAVLEAARKLLEDERAPRRQRLLTDLIHNLSGDGAAERRDEDGKWFEGLESRFKNKSSYMRYSCESRIRSYMKEVSNFISNVHPTARDAYKRILDLMSDKLKSVKYNGSYFDRTEEEAAMRLCTKEGWFSCQGPFDRDDCPCKHSINPYTNRESRILFSTWNLDHIIEKKRSVVPELAEAVKTRDGREVNWEYFYQLLFTLNNLKLVHIACHKKTNHNLSCDKTKIYRKRKQTREIS
SIO_010081: DFFB
subclass of: SO_0000673
so part of: DFFB
location: complement(join(888223..888439,888760..888860,889088..889261,889401..889480,890066..>890285))
location: region:888223-890285:-1
so has part: feature:890066-890285:-1:exon
so has part: feature:889401-889480:-1:exon
so has part: feature:889088-889261:-1:exon
so has part: feature:888760-888860:-1:exon
so has part: feature:888223-888439:-1:exon

XP_010721034.1
type: Protein
SIO_000068: ncbiprotein

position:888223:-1
position: 888223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890066-890285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:889401-889480:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:889088-889261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888760-888860:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:888223-888439:-1:exon

CEP104
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CEP104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 891075..903966
location: region:891075-903966:1
so has part: feature:891075-903966:1:exon
subclass of: SO_0000010

100548672
type: Gene
SIO_000068: ncbigene

position:891075:1
position: 891075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903966:1
position: 903966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891075-903966:1:exon

CEP104
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CEP104
product: centrosomal protein 104, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_010722713.2
SIO_010081: CEP104
subclass of: SO_0000673
so part of: CEP104
location: join(891075..891094,891848..891974,892494..892667,893000..893138,893628..893693,894026..894102,894255..894423,894636..894794,895160..895411,896190..896393,896915..897082,897339..897512,898358..898534,898613..898819,898915..899031,899403..899439,899583..899655,900039..900147,900410..900548,901000..901067,901472..901562,902411..903966)
location: region:891075-903966:1
so has part: feature:891075-891094:1:exon
so has part: feature:891848-891974:1:exon
so has part: feature:892494-892667:1:exon
so has part: feature:893000-893138:1:exon
so has part: feature:893628-893693:1:exon
so has part: feature:894026-894102:1:exon
so has part: feature:894255-894423:1:exon
so has part: feature:894636-894794:1:exon
so has part: feature:895160-895411:1:exon
so has part: feature:896190-896393:1:exon
so has part: feature:896915-897082:1:exon
so has part: feature:897339-897512:1:exon
so has part: feature:898358-898534:1:exon
so has part: feature:898613-898819:1:exon
so has part: feature:898915-899031:1:exon
so has part: feature:899403-899439:1:exon
so has part: feature:899583-899655:1:exon
so has part: feature:900039-900147:1:exon
so has part: feature:900410-900548:1:exon
so has part: feature:901000-901067:1:exon
so has part: feature:901472-901562:1:exon
so has part: feature:902411-903966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891075-891094:1:exon

position:891094:1
position: 891094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:891848-891974:1:exon

position:891848:1
position: 891848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891974:1
position: 891974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:892494-892667:1:exon

position:892494:1
position: 892494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892667:1
position: 892667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:893000-893138:1:exon

position:893000:1
position: 893000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893138:1
position: 893138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:893628-893693:1:exon

position:893628:1
position: 893628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:893693:1
position: 893693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:894026-894102:1:exon

position:894026:1
position: 894026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894102:1
position: 894102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:894255-894423:1:exon

position:894255:1
position: 894255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894423:1
position: 894423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:894636-894794:1:exon

position:894636:1
position: 894636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894794:1
position: 894794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:895160-895411:1:exon

position:895160:1
position: 895160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:895411:1
position: 895411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:896190-896393:1:exon

position:896190:1
position: 896190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:896393:1
position: 896393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:896915-897082:1:exon

position:896915:1
position: 896915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897082:1
position: 897082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:897339-897512:1:exon

position:897339:1
position: 897339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897512:1
position: 897512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:898358-898534:1:exon

position:898358:1
position: 898358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898534:1
position: 898534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:898613-898819:1:exon

position:898613:1
position: 898613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:898819:1
position: 898819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:898915-899031:1:exon

position:898915:1
position: 898915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899031:1
position: 899031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:899403-899439:1:exon

position:899403:1
position: 899403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899439:1
position: 899439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:899583-899655:1:exon

position:899583:1
position: 899583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:899655:1
position: 899655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:900039-900147:1:exon

position:900039:1
position: 900039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900147:1
position: 900147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:900410-900548:1:exon

position:900410:1
position: 900410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900548:1
position: 900548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:901000-901067:1:exon

position:901000:1
position: 901000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901067:1
position: 901067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:901472-901562:1:exon

position:901472:1
position: 901472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901562:1
position: 901562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:902411-903966:1:exon

position:902411:1
position: 902411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CEP104
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CEP104
product: centrosomal protein 104, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_031556628.1
SIO_010081: CEP104
subclass of: SO_0000673
so part of: CEP104
location: join(891848..891974,892494..892667,893000..893138,893628..893693,894026..894102,894255..894423,894636..894794,895160..895411,896190..896393,896915..897082,897339..897512,898358..898534,898613..898819,898915..899031,899403..899439,899583..899655,900039..900147,900410..900548,901000..901067,901472..901562,902411..902563,903576..903966)
location: region:891848-903966:1
so has part: feature:891848-891974:1:exon
so has part: feature:892494-892667:1:exon
so has part: feature:893000-893138:1:exon
so has part: feature:893628-893693:1:exon
so has part: feature:894026-894102:1:exon
so has part: feature:894255-894423:1:exon
so has part: feature:894636-894794:1:exon
so has part: feature:895160-895411:1:exon
so has part: feature:896190-896393:1:exon
so has part: feature:896915-897082:1:exon
so has part: feature:897339-897512:1:exon
so has part: feature:898358-898534:1:exon
so has part: feature:898613-898819:1:exon
so has part: feature:898915-899031:1:exon
so has part: feature:899403-899439:1:exon
so has part: feature:899583-899655:1:exon
so has part: feature:900039-900147:1:exon
so has part: feature:900410-900548:1:exon
so has part: feature:901000-901067:1:exon
so has part: feature:901472-901562:1:exon
so has part: feature:902411-902563:1:exon
so has part: feature:903576-903966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891848-891974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892494-892667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893000-893138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893628-893693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894026-894102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894255-894423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894636-894794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895160-895411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896190-896393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896915-897082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897339-897512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898358-898534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898613-898819:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898915-899031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899403-899439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:899583-899655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:900039-900147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:900410-900548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901000-901067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:901472-901562:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:902411-902563:1:exon

position:902563:1
position: 902563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:903576-903966:1:exon

position:903576:1
position: 903576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CEP104
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CEP104
product: centrosomal protein 104, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XM_031556631.1
SIO_010081: CEP104
subclass of: SO_0000673
so part of: CEP104
location: join(891848..891974,892494..892667,893000..893138,893628..893693,894026..894102,894255..894423,894636..894794,895160..895411,896190..896393,896915..897082,897339..897512,898358..898534,898613..898819,898915..899031,899403..899439,899583..899655,900039..900147,900410..900548,901000..901067,902411..903966)
location: region:891848-903966:1
so has part: feature:891848-891974:1:exon
so has part: feature:892494-892667:1:exon
so has part: feature:893000-893138:1:exon
so has part: feature:893628-893693:1:exon
so has part: feature:894026-894102:1:exon
so has part: feature:894255-894423:1:exon
so has part: feature:894636-894794:1:exon
so has part: feature:895160-895411:1:exon
so has part: feature:896190-896393:1:exon
so has part: feature:896915-897082:1:exon
so has part: feature:897339-897512:1:exon
so has part: feature:898358-898534:1:exon
so has part: feature:898613-898819:1:exon
so has part: feature:898915-899031:1:exon
so has part: feature:899403-899439:1:exon
so has part: feature:899583-899655:1:exon
so has part: feature:900039-900147:1:exon
so has part: feature:900410-900548:1:exon
so has part: feature:901000-901067:1:exon
so has part: feature:902411-903966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891848-891974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892494-892667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893000-893138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893628-893693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894026-894102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894255-894423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894636-894794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895160-895411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896190-896393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896915-897082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897339-897512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898358-898534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898613-898819:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898915-899031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899403-899439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:899583-899655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:900039-900147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:900410-900548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901000-901067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:902411-903966:1:exon

CEP104
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CEP104
product: centrosomal protein 104, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_031556629.1
SIO_010081: CEP104
subclass of: SO_0000673
so part of: CEP104
location: join(891848..891974,892494..892667,893000..893138,893628..893693,894026..894102,894255..894423,894636..894794,895160..895411,896190..896393,896915..897082,897339..897512,898613..898819,898915..899031,899403..899439,899583..899655,900039..900147,900410..900548,901000..901067,901472..901562,902411..903966)
location: region:891848-903966:1
so has part: feature:891848-891974:1:exon
so has part: feature:892494-892667:1:exon
so has part: feature:893000-893138:1:exon
so has part: feature:893628-893693:1:exon
so has part: feature:894026-894102:1:exon
so has part: feature:894255-894423:1:exon
so has part: feature:894636-894794:1:exon
so has part: feature:895160-895411:1:exon
so has part: feature:896190-896393:1:exon
so has part: feature:896915-897082:1:exon
so has part: feature:897339-897512:1:exon
so has part: feature:898613-898819:1:exon
so has part: feature:898915-899031:1:exon
so has part: feature:899403-899439:1:exon
so has part: feature:899583-899655:1:exon
so has part: feature:900039-900147:1:exon
so has part: feature:900410-900548:1:exon
so has part: feature:901000-901067:1:exon
so has part: feature:901472-901562:1:exon
so has part: feature:902411-903966:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:891848-891974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892494-892667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893000-893138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893628-893693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894026-894102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894255-894423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894636-894794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895160-895411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896190-896393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896915-897082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897339-897512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898613-898819:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898915-899031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:899403-899439:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899583-899655:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:900039-900147:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:900410-900548:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:901000-901067:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901472-901562:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:902411-903966:1:exon

CEP104
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CEP104
product: centrosomal protein 104, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_031556632.1
SIO_010081: CEP104
subclass of: SO_0000673
so part of: CEP104
location: join(891848..891974,892494..892667,893000..893138,893628..893693,894026..894102,894255..894423,894636..894794,895160..895411,896190..896393,896915..897082,897339..897512,898358..898534,898613..898819,898915..899031,899403..899439,899583..899655,900039..900147,900410..900548,900719..900991)
location: region:891848-900991:1
so has part: feature:891848-891974:1:exon
so has part: feature:892494-892667:1:exon
so has part: feature:893000-893138:1:exon
so has part: feature:893628-893693:1:exon
so has part: feature:894026-894102:1:exon
so has part: feature:894255-894423:1:exon
so has part: feature:894636-894794:1:exon
so has part: feature:895160-895411:1:exon
so has part: feature:896190-896393:1:exon
so has part: feature:896915-897082:1:exon
so has part: feature:897339-897512:1:exon
so has part: feature:898358-898534:1:exon
so has part: feature:898613-898819:1:exon
so has part: feature:898915-899031:1:exon
so has part: feature:899403-899439:1:exon
so has part: feature:899583-899655:1:exon
so has part: feature:900039-900147:1:exon
so has part: feature:900410-900548:1:exon
so has part: feature:900719-900991:1:exon

position:900991:1
position: 900991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891848-891974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892494-892667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893000-893138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893628-893693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894026-894102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894255-894423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894636-894794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895160-895411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896190-896393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896915-897082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897339-897512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898358-898534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898613-898819:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898915-899031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899403-899439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:899583-899655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:900039-900147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:900410-900548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:900719-900991:1:exon

position:900719:1
position: 900719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CEP104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CEP104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 104 kDa isoform X1
translation: MPHKVGFVVISSSGHEDGFSAKELMVHAPTVNGWRSPRLCQYPQEITLQLVERCRIRKLQLLAHQYMIPSKIEFFISESLPEYFAPYQSERFHRLGYVPLSDNEKTGFKARELKSVYMDAVGQYLKLIFHKNYVNKYNLYSQVALVAINVIGDPADYSNDSNKHPSREKLIDHYLGIKSDDPALDGTYLGKSDSISPLDDLAFDMYQDPEVAQIIRRLDEKKHEAVHQERYDYAKKLKQAIADLQKVGERLGRYEVEKRYAVEKEDYDLAKKKKQQMDAYRLKVYQQLQLHNLLDAELMTRKPPDLPVEPVVYDSLQHTKATSSPSCENTELQSSQGELWKAESLLEEKPTEPNSPEPVFLHQSTPPTLSHPTTSREVFAQEEVEFLPYDERPLPAIHKHSEEAVRYLEPEKTEGDISNTPRSGITGEPEPLSEKALREASPAIEVFGEALVSGAYSKSWSYREDALLAVYKKLMEMAVSTPKEDLKNMLRAAIFLVRRAIKDIVSSVFQASLKLLKMLITQYVPKHKLGKLETSHCVEKTLPGLLSRTGDSSSRLRIMAAKFIQEMALWSEVKPLQIVPVHLVQPLKSNSPTHLAMSRVELVECLLKEMGTENSGFTISNAMKFATGALEHRVYEVRDVALRIIFDMYRKHKAAILEYLPPDDASIRKTVLYKTLFDGFTKIDGKLSEAEMRAQKKAATEEAERQKKAEIKVLQGQLAALREIQAEVQAGKEKESDFQKTKDQGYKSPQPAAAEIPDDHSSVANYLDNLCIFCGERNESFTEEGLDLHYWKRCPMLTRCEHCKQVVEIASLTEHLLTECDKKDSFGKCQRCSEAFPKDELLDHIKSKTCNAAKPENVANHCPLCHDNFSPGEEAWKSHLMGTDGCAMNLRRLSTINKTIPMQPGKTGGHYLKKPSPSMTKVRPPSIGSKIPTPRGGPNKSSGKTYSKQ
SIO_010081: CEP104
subclass of: SO_0000673
so part of: CEP104
location: join(891862..891974,892494..892667,893000..893138,893628..893693,894026..894102,894255..894423,894636..894794,895160..895411,896190..896393,896915..897082,897339..897512,898358..898534,898613..898819,898915..899031,899403..899439,899583..899655,900039..900147,900410..900548,901000..901067,901472..901562,902411..902547)
location: region:891862-902547:1
so has part: feature:891862-891974:1:exon
so has part: feature:892494-892667:1:exon
so has part: feature:893000-893138:1:exon
so has part: feature:893628-893693:1:exon
so has part: feature:894026-894102:1:exon
so has part: feature:894255-894423:1:exon
so has part: feature:894636-894794:1:exon
so has part: feature:895160-895411:1:exon
so has part: feature:896190-896393:1:exon
so has part: feature:896915-897082:1:exon
so has part: feature:897339-897512:1:exon
so has part: feature:898358-898534:1:exon
so has part: feature:898613-898819:1:exon
so has part: feature:898915-899031:1:exon
so has part: feature:899403-899439:1:exon
so has part: feature:899583-899655:1:exon
so has part: feature:900039-900147:1:exon
so has part: feature:900410-900548:1:exon
so has part: feature:901000-901067:1:exon
so has part: feature:901472-901562:1:exon
so has part: feature:902411-902547:1:exon

XP_031412488.1
type: Protein
SIO_000068: ncbiprotein

position:891862:1
position: 891862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902547:1
position: 902547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891862-891974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892494-892667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893000-893138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893628-893693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894026-894102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894255-894423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894636-894794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895160-895411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896190-896393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896915-897082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897339-897512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898358-898534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898613-898819:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898915-899031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899403-899439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:899583-899655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:900039-900147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:900410-900548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901000-901067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:901472-901562:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:902411-902547:1:exon

CEP104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CEP104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 104 kDa isoform X1
translation: MPHKVGFVVISSSGHEDGFSAKELMVHAPTVNGWRSPRLCQYPQEITLQLVERCRIRKLQLLAHQYMIPSKIEFFISESLPEYFAPYQSERFHRLGYVPLSDNEKTGFKARELKSVYMDAVGQYLKLIFHKNYVNKYNLYSQVALVAINVIGDPADYSNDSNKHPSREKLIDHYLGIKSDDPALDGTYLGKSDSISPLDDLAFDMYQDPEVAQIIRRLDEKKHEAVHQERYDYAKKLKQAIADLQKVGERLGRYEVEKRYAVEKEDYDLAKKKKQQMDAYRLKVYQQLQLHNLLDAELMTRKPPDLPVEPVVYDSLQHTKATSSPSCENTELQSSQGELWKAESLLEEKPTEPNSPEPVFLHQSTPPTLSHPTTSREVFAQEEVEFLPYDERPLPAIHKHSEEAVRYLEPEKTEGDISNTPRSGITGEPEPLSEKALREASPAIEVFGEALVSGAYSKSWSYREDALLAVYKKLMEMAVSTPKEDLKNMLRAAIFLVRRAIKDIVSSVFQASLKLLKMLITQYVPKHKLGKLETSHCVEKTLPGLLSRTGDSSSRLRIMAAKFIQEMALWSEVKPLQIVPVHLVQPLKSNSPTHLAMSRVELVECLLKEMGTENSGFTISNAMKFATGALEHRVYEVRDVALRIIFDMYRKHKAAILEYLPPDDASIRKTVLYKTLFDGFTKIDGKLSEAEMRAQKKAATEEAERQKKAEIKVLQGQLAALREIQAEVQAGKEKESDFQKTKDQGYKSPQPAAAEIPDDHSSVANYLDNLCIFCGERNESFTEEGLDLHYWKRCPMLTRCEHCKQVVEIASLTEHLLTECDKKDSFGKCQRCSEAFPKDELLDHIKSKTCNAAKPENVANHCPLCHDNFSPGEEAWKSHLMGTDGCAMNLRRLSTINKTIPMQPGKTGGHYLKKPSPSMTKVRPPSIGSKIPTPRGGPNKSSGKTYSKQ
SIO_010081: CEP104
subclass of: SO_0000673
so part of: CEP104
location: join(891862..891974,892494..892667,893000..893138,893628..893693,894026..894102,894255..894423,894636..894794,895160..895411,896190..896393,896915..897082,897339..897512,898358..898534,898613..898819,898915..899031,899403..899439,899583..899655,900039..900147,900410..900548,901000..901067,901472..901562,902411..902547)
location: region:891862-902547:1
so has part: feature:891862-891974:1:exon
so has part: feature:892494-892667:1:exon
so has part: feature:893000-893138:1:exon
so has part: feature:893628-893693:1:exon
so has part: feature:894026-894102:1:exon
so has part: feature:894255-894423:1:exon
so has part: feature:894636-894794:1:exon
so has part: feature:895160-895411:1:exon
so has part: feature:896190-896393:1:exon
so has part: feature:896915-897082:1:exon
so has part: feature:897339-897512:1:exon
so has part: feature:898358-898534:1:exon
so has part: feature:898613-898819:1:exon
so has part: feature:898915-899031:1:exon
so has part: feature:899403-899439:1:exon
so has part: feature:899583-899655:1:exon
so has part: feature:900039-900147:1:exon
so has part: feature:900410-900548:1:exon
so has part: feature:901000-901067:1:exon
so has part: feature:901472-901562:1:exon
so has part: feature:902411-902547:1:exon

XP_010721015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:891862-891974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892494-892667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893000-893138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893628-893693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894026-894102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894255-894423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894636-894794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895160-895411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896190-896393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896915-897082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897339-897512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898358-898534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898613-898819:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898915-899031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899403-899439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:899583-899655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:900039-900147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:900410-900548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901000-901067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:901472-901562:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:902411-902547:1:exon

CEP104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CEP104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 104 kDa isoform X2
translation: MPHKVGFVVISSSGHEDGFSAKELMVHAPTVNGWRSPRLCQYPQEITLQLVERCRIRKLQLLAHQYMIPSKIEFFISESLPEYFAPYQSERFHRLGYVPLSDNEKTGFKARELKSVYMDAVGQYLKLIFHKNYVNKYNLYSQVALVAINVIGDPADYSNDSNKHPSREKLIDHYLGIKSDDPALDGTYLGKSDSISPLDDLAFDMYQDPEVAQIIRRLDEKKHEAVHQERYDYAKKLKQAIADLQKVGERLGRYEVEKRYAVEKEDYDLAKKKKQQMDAYRLKVYQQLQLHNLLDAELMTRKPPDLPVEPVVYDSLQHTKATSSPSCENTELQSSQGELWKAESLLEEKPTEPNSPEPVFLHQSTPPTLSHPTTSREVFAQEEVEFLPYDERPLPAIHKHSEEAVRYLEPEKTEGDISNTPRSGITGEPEPLSEKALREASPAIEVFGEALVSGAYSKSWSYREDALLAVYKKLMEMAVSTPKEDLKNMLRAAIFLVRRAIKDIVSSVFQASLKLLKMLITQYVPKHKLGKLETSHCVEKTLPGLLSRTGDSSSRLRIMAAKFIQFATGALEHRVYEVRDVALRIIFDMYRKHKAAILEYLPPDDASIRKTVLYKTLFDGFTKIDGKLSEAEMRAQKKAATEEAERQKKAEIKVLQGQLAALREIQAEVQAGKEKESDFQKTKDQGYKSPQPAAAEIPDDHSSVANYLDNLCIFCGERNESFTEEGLDLHYWKRCPMLTRCEHCKQVVEIASLTEHLLTECDKKDSFGKCQRCSEAFPKDELLDHIKSKTCNAAKPENVANHCPLCHDNFSPGEEAWKSHLMGTDGCAMNLRRLSTINKTIPMQPGKTGGHYLKKPSPSMTKVRPPSIGSKIPTPRGGPNKSSGKTYSKQ
SIO_010081: CEP104
subclass of: SO_0000673
so part of: CEP104
location: join(891862..891974,892494..892667,893000..893138,893628..893693,894026..894102,894255..894423,894636..894794,895160..895411,896190..896393,896915..897082,897339..897512,898613..898819,898915..899031,899403..899439,899583..899655,900039..900147,900410..900548,901000..901067,901472..901562,902411..902547)
location: region:891862-902547:1
so has part: feature:891862-891974:1:exon
so has part: feature:892494-892667:1:exon
so has part: feature:893000-893138:1:exon
so has part: feature:893628-893693:1:exon
so has part: feature:894026-894102:1:exon
so has part: feature:894255-894423:1:exon
so has part: feature:894636-894794:1:exon
so has part: feature:895160-895411:1:exon
so has part: feature:896190-896393:1:exon
so has part: feature:896915-897082:1:exon
so has part: feature:897339-897512:1:exon
so has part: feature:898613-898819:1:exon
so has part: feature:898915-899031:1:exon
so has part: feature:899403-899439:1:exon
so has part: feature:899583-899655:1:exon
so has part: feature:900039-900147:1:exon
so has part: feature:900410-900548:1:exon
so has part: feature:901000-901067:1:exon
so has part: feature:901472-901562:1:exon
so has part: feature:902411-902547:1:exon

XP_031412489.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:891862-891974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892494-892667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893000-893138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893628-893693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894026-894102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894255-894423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894636-894794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895160-895411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896190-896393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896915-897082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897339-897512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898613-898819:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898915-899031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:899403-899439:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899583-899655:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:900039-900147:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:900410-900548:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:901000-901067:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901472-901562:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:902411-902547:1:exon

CEP104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CEP104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 104 kDa isoform X3
translation: MPHKVGFVVISSSGHEDGFSAKELMVHAPTVNGWRSPRLCQYPQEITLQLVERCRIRKLQLLAHQYMIPSKIEFFISESLPEYFAPYQSERFHRLGYVPLSDNEKTGFKARELKSVYMDAVGQYLKLIFHKNYVNKYNLYSQVALVAINVIGDPADYSNDSNKHPSREKLIDHYLGIKSDDPALDGTYLGKSDSISPLDDLAFDMYQDPEVAQIIRRLDEKKHEAVHQERYDYAKKLKQAIADLQKVGERLGRYEVEKRYAVEKEDYDLAKKKKQQMDAYRLKVYQQLQLHNLLDAELMTRKPPDLPVEPVVYDSLQHTKATSSPSCENTELQSSQGELWKAESLLEEKPTEPNSPEPVFLHQSTPPTLSHPTTSREVFAQEEVEFLPYDERPLPAIHKHSEEAVRYLEPEKTEGDISNTPRSGITGEPEPLSEKALREASPAIEVFGEALVSGAYSKSWSYREDALLAVYKKLMEMAVSTPKEDLKNMLRAAIFLVRRAIKDIVSSVFQASLKLLKMLITQYVPKHKLGKLETSHCVEKTLPGLLSRTGDSSSRLRIMAAKFIQEMALWSEVKPLQIVPVHLVQPLKSNSPTHLAMSRVELVECLLKEMGTENSGFTISNAMKFATGALEHRVYEVRDVALRIIFDMYRKHKAAILEYLPPDDASIRKTVLYKTLFDGFTKIDGKLSEAEMRAQKKAATEEAERQKKAEIKVLQGQLAALREIQAEVQAGKEKESDFQKTKDQGYKSPQPAAAEIPDDHSSVANYLDNLCIFCGERNESFTEEGLDLHYWKRCPMLTRCEHCKQVVEIASLTEHLLTECDKKDSFGKCQRCSEAFPKDELLDHIKSKTCNAAKPENVANHCPLCHDNFSPGEEAKREATI
SIO_010081: CEP104
subclass of: SO_0000673
so part of: CEP104
location: join(891862..891974,892494..892667,893000..893138,893628..893693,894026..894102,894255..894423,894636..894794,895160..895411,896190..896393,896915..897082,897339..897512,898358..898534,898613..898819,898915..899031,899403..899439,899583..899655,900039..900147,900410..900548,901000..901067,902411..902434)
location: region:891862-902434:1
so has part: feature:891862-891974:1:exon
so has part: feature:892494-892667:1:exon
so has part: feature:893000-893138:1:exon
so has part: feature:893628-893693:1:exon
so has part: feature:894026-894102:1:exon
so has part: feature:894255-894423:1:exon
so has part: feature:894636-894794:1:exon
so has part: feature:895160-895411:1:exon
so has part: feature:896190-896393:1:exon
so has part: feature:896915-897082:1:exon
so has part: feature:897339-897512:1:exon
so has part: feature:898358-898534:1:exon
so has part: feature:898613-898819:1:exon
so has part: feature:898915-899031:1:exon
so has part: feature:899403-899439:1:exon
so has part: feature:899583-899655:1:exon
so has part: feature:900039-900147:1:exon
so has part: feature:900410-900548:1:exon
so has part: feature:901000-901067:1:exon
so has part: feature:902411-902434:1:exon

XP_031412491.1
type: Protein
SIO_000068: ncbiprotein

position:902434:1
position: 902434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891862-891974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892494-892667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893000-893138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893628-893693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894026-894102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894255-894423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894636-894794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895160-895411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896190-896393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896915-897082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897339-897512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898358-898534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898613-898819:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898915-899031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899403-899439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:899583-899655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:900039-900147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:900410-900548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:901000-901067:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:902411-902434:1:exon

CEP104
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CEP104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 104 kDa isoform X4
translation: MPHKVGFVVISSSGHEDGFSAKELMVHAPTVNGWRSPRLCQYPQEITLQLVERCRIRKLQLLAHQYMIPSKIEFFISESLPEYFAPYQSERFHRLGYVPLSDNEKTGFKARELKSVYMDAVGQYLKLIFHKNYVNKYNLYSQVALVAINVIGDPADYSNDSNKHPSREKLIDHYLGIKSDDPALDGTYLGKSDSISPLDDLAFDMYQDPEVAQIIRRLDEKKHEAVHQERYDYAKKLKQAIADLQKVGERLGRYEVEKRYAVEKEDYDLAKKKKQQMDAYRLKVYQQLQLHNLLDAELMTRKPPDLPVEPVVYDSLQHTKATSSPSCENTELQSSQGELWKAESLLEEKPTEPNSPEPVFLHQSTPPTLSHPTTSREVFAQEEVEFLPYDERPLPAIHKHSEEAVRYLEPEKTEGDISNTPRSGITGEPEPLSEKALREASPAIEVFGEALVSGAYSKSWSYREDALLAVYKKLMEMAVSTPKEDLKNMLRAAIFLVRRAIKDIVSSVFQASLKLLKMLITQYVPKHKLGKLETSHCVEKTLPGLLSRTGDSSSRLRIMAAKFIQEMALWSEVKPLQIVPVHLVQPLKSNSPTHLAMSRVELVECLLKEMGTENSGFTISNAMKFATGALEHRVYEVRDVALRIIFDMYRKHKAAILEYLPPDDASIRKTVLYKTLFDGFTKIDGKLSEAEMRAQKKAATEEAERQKKAEIKVLQGQLAALREIQAEVQAGKEKESDFQKTKDQGYKSPQPAAAEIPDDHSSVANYLDNLCIFCGERNESFTEEGLDLHYWKRCPMLTRCEHCKQVVEIASLTEHLLTECDKKDSFGKCQRCSEAFPKDELLDHIKSKTCNVLEMLCFHECM
SIO_010081: CEP104
subclass of: SO_0000673
so part of: CEP104
location: join(891862..891974,892494..892667,893000..893138,893628..893693,894026..894102,894255..894423,894636..894794,895160..895411,896190..896393,896915..897082,897339..897512,898358..898534,898613..898819,898915..899031,899403..899439,899583..899655,900039..900147,900410..900548,900719..900753)
location: region:891862-900753:1
so has part: feature:891862-891974:1:exon
so has part: feature:892494-892667:1:exon
so has part: feature:893000-893138:1:exon
so has part: feature:893628-893693:1:exon
so has part: feature:894026-894102:1:exon
so has part: feature:894255-894423:1:exon
so has part: feature:894636-894794:1:exon
so has part: feature:895160-895411:1:exon
so has part: feature:896190-896393:1:exon
so has part: feature:896915-897082:1:exon
so has part: feature:897339-897512:1:exon
so has part: feature:898358-898534:1:exon
so has part: feature:898613-898819:1:exon
so has part: feature:898915-899031:1:exon
so has part: feature:899403-899439:1:exon
so has part: feature:899583-899655:1:exon
so has part: feature:900039-900147:1:exon
so has part: feature:900410-900548:1:exon
so has part: feature:900719-900753:1:exon

XP_031412492.1
type: Protein
SIO_000068: ncbiprotein

position:900753:1
position: 900753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:891862-891974:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:892494-892667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:893000-893138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:893628-893693:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:894026-894102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:894255-894423:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:894636-894794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895160-895411:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:896190-896393:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:896915-897082:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:897339-897512:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:898358-898534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898613-898819:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898915-899031:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899403-899439:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:899583-899655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:900039-900147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:900410-900548:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:900719-900753:1:exon

LRRC47
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LRRC47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <904154..908458
location: region:904154-908458:1
so has part: feature:904154-908458:1:exon
subclass of: SO_0000010

104914117
type: Gene
SIO_000068: ncbigene

position:904154:1
position: 904154
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:908458:1
position: 908458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904154-908458:1:exon

LRRC47
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LRRC47
product: leucine rich repeat containing 47
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010722733.2
SIO_010081: LRRC47
subclass of: SO_0000673
so part of: LRRC47
location: join(<904154..904299,904383..904695,905242..905358,905463..905578,906326..906428,906813..906902,907108..908458)
location: region:904154-908458:1
so has part: feature:904154-904299:1:exon
so has part: feature:904383-904695:1:exon
so has part: feature:905242-905358:1:exon
so has part: feature:905463-905578:1:exon
so has part: feature:906326-906428:1:exon
so has part: feature:906813-906902:1:exon
so has part: feature:907108-908458:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:904154-904299:1:exon

position:904299:1
position: 904299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904383-904695:1:exon

position:904383:1
position: 904383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904695:1
position: 904695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:905242-905358:1:exon

position:905242:1
position: 905242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905358:1
position: 905358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:905463-905578:1:exon

position:905463:1
position: 905463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905578:1
position: 905578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:906326-906428:1:exon

position:906326:1
position: 906326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906428:1
position: 906428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:906813-906902:1:exon

position:906813:1
position: 906813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:906902:1
position: 906902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:907108-908458:1:exon

position:907108:1
position: 907108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRC47
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LRRC47
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 47
translation: DRPALVPQSLDVANNRLSALPAALADCPRLKDANLRGNPLRDRRLEKMVXXXXXXAVLEYLRSKGRAEGGREETRRRKREKQQKKDGGDGERDEAEAVGKLLLKVLHVGDNPAPMVVRASPGVRDVRPYIVCCVLRGVQLRPGNAVRRFLSAQTKLHEDICEKRTAATIATHDLQLVKGPLTYSVLPPAELKITPLGRKEIKAKDLLRQLQVEAEEQRKQKKRQNVSGLHKYLQLLDGKDSYPCLVDAEGVVISFPPITNSEKTKIRKTTRDLFLEVTSDTSLQICKDVMDALILKIAELNRFTLENKEEGSGSDDESDALSGPVSVNPSQNTQQPLVVEQVRVVDMDGNLKVLYPSKTDLATVSSLLTVIR
SIO_010081: LRRC47
subclass of: SO_0000673
so part of: LRRC47
location: join(<904154..904299,904383..904695,905242..905358,905463..905578,906326..906428,906813..906902,907108..907341)
location: region:904154-907341:1
so has part: feature:904154-904299:1:exon
so has part: feature:904383-904695:1:exon
so has part: feature:905242-905358:1:exon
so has part: feature:905463-905578:1:exon
so has part: feature:906326-906428:1:exon
so has part: feature:906813-906902:1:exon
so has part: feature:907108-907341:1:exon

XP_010721035.1
type: Protein
SIO_000068: ncbiprotein

position:907341:1
position: 907341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904154-904299:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:904383-904695:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:905242-905358:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:905463-905578:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:906326-906428:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:906813-906902:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:907108-907341:1:exon

CCDC27
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CCDC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(908720..911665)
location: region:908720-911665:-1
so has part: feature:908720-911665:-1:exon
subclass of: SO_0000010

104914118
type: Gene
SIO_000068: ncbigene

position:908720:-1
position: 908720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911665:-1
position: 911665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908720-911665:-1:exon

CCDC27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC27
product: coiled-coil domain containing 27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_019622451.2
SIO_010081: CCDC27
subclass of: SO_0000673
so part of: CCDC27
location: complement(join(908720..908881,908993..909097,909232..909444,909823..909900,910041..910171,910674..910872,911006..911164,911481..911665))
location: region:908720-911665:-1
so has part: feature:911481-911665:-1:exon
so has part: feature:911006-911164:-1:exon
so has part: feature:910674-910872:-1:exon
so has part: feature:910041-910171:-1:exon
so has part: feature:909823-909900:-1:exon
so has part: feature:909232-909444:-1:exon
so has part: feature:908993-909097:-1:exon
so has part: feature:908720-908881:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:911481-911665:-1:exon

position:911481:-1
position: 911481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:911006-911164:-1:exon

position:911006:-1
position: 911006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911164:-1
position: 911164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:910674-910872:-1:exon

position:910674:-1
position: 910674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910872:-1
position: 910872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:910041-910171:-1:exon

position:910041:-1
position: 910041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910171:-1
position: 910171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:909823-909900:-1:exon

position:909823:-1
position: 909823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909900:-1
position: 909900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:909232-909444:-1:exon

position:909232:-1
position: 909232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909444:-1
position: 909444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:908993-909097:-1:exon

position:908993:-1
position: 908993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:909097:-1
position: 909097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:908720-908881:-1:exon

position:908881:-1
position: 908881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 27
translation: MAQLTALQKAHEELCAELQKAEDDYNMATGAMCSLQRQLEIQESQLRRTKSENERLQKEIRGRENQLQAMSAKFGSLREERKHEEMMAAMEKENCSLRQVITEQESKLGEQMELISGLQGTTWQLQAEALTNRYHIQKQQRAQEKMQSQTEMLQHTELQTRVALERVTSKFERFRSKIIQATFSTAGIKAPQAELTDEEVLEAMQKIINERIEFHQMLKQKGIKVPSLTNIDTFTSSPSISKGRR
SIO_010081: CCDC27
subclass of: SO_0000673
so part of: CCDC27
location: complement(join(908759..908881,908993..909097,909232..909444,909823..909900,910041..910171,910674..910761))
location: region:908759-910761:-1
so has part: feature:910674-910761:-1:exon
so has part: feature:910041-910171:-1:exon
so has part: feature:909823-909900:-1:exon
so has part: feature:909232-909444:-1:exon
so has part: feature:908993-909097:-1:exon
so has part: feature:908759-908881:-1:exon

XP_019477996.1
type: Protein
SIO_000068: ncbiprotein

position:908759:-1
position: 908759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:910761:-1
position: 910761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910674-910761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910041-910171:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:909823-909900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:909232-909444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:908993-909097:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:908759-908881:-1:exon

TP73
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TP73
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(913223..946296)
location: region:913223-946296:-1
so has part: feature:913223-946296:-1:exon
subclass of: SO_0000010

100545037
type: Gene
SIO_000068: ncbigene

position:913223:-1
position: 913223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:946296:-1
position: 946296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913223-946296:-1:exon

TP73
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TP73
product: tumor protein p73, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_010722717.3
SIO_010081: TP73
subclass of: SO_0000673
so part of: TP73
location: complement(join(913223..914004,915662..915755,916712..916844,916996..917150,917542..917666,917796..917884,918542..918684,918977..919086,919489..919604,919738..919924,931516..931761,938384..938507,939227..939322,946125..946296))
location: region:913223-946296:-1
so has part: feature:946125-946296:-1:exon
so has part: feature:939227-939322:-1:exon
so has part: feature:938384-938507:-1:exon
so has part: feature:931516-931761:-1:exon
so has part: feature:919738-919924:-1:exon
so has part: feature:919489-919604:-1:exon
so has part: feature:918977-919086:-1:exon
so has part: feature:918542-918684:-1:exon
so has part: feature:917796-917884:-1:exon
so has part: feature:917542-917666:-1:exon
so has part: feature:916996-917150:-1:exon
so has part: feature:916712-916844:-1:exon
so has part: feature:915662-915755:-1:exon
so has part: feature:913223-914004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946125-946296:-1:exon

position:946125:-1
position: 946125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:939227-939322:-1:exon

position:939227:-1
position: 939227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939322:-1
position: 939322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:938384-938507:-1:exon

position:938384:-1
position: 938384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938507:-1
position: 938507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:931516-931761:-1:exon

position:931516:-1
position: 931516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931761:-1
position: 931761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:919738-919924:-1:exon

position:919738:-1
position: 919738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919924:-1
position: 919924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:919489-919604:-1:exon

position:919489:-1
position: 919489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919604:-1
position: 919604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:918977-919086:-1:exon

position:918977:-1
position: 918977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919086:-1
position: 919086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:918542-918684:-1:exon

position:918542:-1
position: 918542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918684:-1
position: 918684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:917796-917884:-1:exon

position:917796:-1
position: 917796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917884:-1
position: 917884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:917542-917666:-1:exon

position:917542:-1
position: 917542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917666:-1
position: 917666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:916996-917150:-1:exon

position:916996:-1
position: 916996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917150:-1
position: 917150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:916712-916844:-1:exon

position:916712:-1
position: 916712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:916844:-1
position: 916844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:915662-915755:-1:exon

position:915662:-1
position: 915662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915755:-1
position: 915755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:913223-914004:-1:exon

position:914004:-1
position: 914004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TP73
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TP73
product: tumor protein p73, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010722719.3
SIO_010081: TP73
subclass of: SO_0000673
so part of: TP73
location: complement(join(913223..914004,915662..915755,916712..916844,916996..917150,917542..917666,917796..917884,918542..918684,918977..919086,919489..919604,919738..919924,931516..931761,938384..938507,939227..939322,943600..943659,944185..944709))
location: region:913223-944709:-1
so has part: feature:944185-944709:-1:exon
so has part: feature:943600-943659:-1:exon
so has part: feature:939227-939322:-1:exon
so has part: feature:938384-938507:-1:exon
so has part: feature:931516-931761:-1:exon
so has part: feature:919738-919924:-1:exon
so has part: feature:919489-919604:-1:exon
so has part: feature:918977-919086:-1:exon
so has part: feature:918542-918684:-1:exon
so has part: feature:917796-917884:-1:exon
so has part: feature:917542-917666:-1:exon
so has part: feature:916996-917150:-1:exon
so has part: feature:916712-916844:-1:exon
so has part: feature:915662-915755:-1:exon
so has part: feature:913223-914004:-1:exon

position:944709:-1
position: 944709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:944185-944709:-1:exon

position:944185:-1
position: 944185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:943600-943659:-1:exon

position:943600:-1
position: 943600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943659:-1
position: 943659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:939227-939322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:938384-938507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:931516-931761:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:919738-919924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:919489-919604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:918977-919086:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:918542-918684:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:917796-917884:-1:exon