Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 22, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 22, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015032.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015032.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000983.2.\nOn Dec 18, 2014 this sequence version replaced NC_015032.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 13725709
topology: linear
so has quality: SO_0000987
location: 1..13725709
location: region:1-13725709:1
RO_0002162: 9103

NC_015032
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13725709:1
position: 13725709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-13725709:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 22
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

LOC104913969
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913969
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5469..18739)
location: region:5469-18739:-1
so has part: feature:5469-18739:-1:exon
subclass of: SO_0000011

104913969
type: Gene
SIO_000068: ncbigene

position:5469:-1
position: 5469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18739:-1
position: 18739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5469-18739:-1:exon

LOC104913969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913969
product: uncharacterized LOC104913969, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 187 samples with support for all annotated introns
transcript id: XR_795744.2
SIO_010081: LOC104913969
subclass of: SO_0000673
so part of: LOC104913969
location: complement(join(5469..6643,10985..11183,12173..12322,18621..18739))
location: region:5469-18739:-1
so has part: feature:18621-18739:-1:exon
so has part: feature:12173-12322:-1:exon
so has part: feature:10985-11183:-1:exon
so has part: feature:5469-6643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18621-18739:-1:exon

position:18621:-1
position: 18621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12173-12322:-1:exon

position:12173:-1
position: 12173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12322:-1
position: 12322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10985-11183:-1:exon

position:10985:-1
position: 10985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11183:-1
position: 11183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5469-6643:-1:exon

position:6643:-1
position: 6643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913969
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913969
product: uncharacterized LOC104913969, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XR_795743.2
SIO_010081: LOC104913969
subclass of: SO_0000673
so part of: LOC104913969
location: complement(join(5469..6643,10985..11183,12173..12322,16289..16317,18621..18739))
location: region:5469-18739:-1
so has part: feature:18621-18739:-1:exon
so has part: feature:16289-16317:-1:exon
so has part: feature:12173-12322:-1:exon
so has part: feature:10985-11183:-1:exon
so has part: feature:5469-6643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:18621-18739:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16289-16317:-1:exon

position:16289:-1
position: 16289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16317:-1
position: 16317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12173-12322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10985-11183:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5469-6643:-1:exon

LOC104913970
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913970
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(20243..22643)
location: region:20243-22643:-1
so has part: feature:20243-22643:-1:exon
subclass of: SO_0000011

104913970
type: Gene
SIO_000068: ncbigene

position:20243:-1
position: 20243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22643:-1
position: 22643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20243-22643:-1:exon

LOC104913970
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913970
product: uncharacterized LOC104913970
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 208 samples with support for all annotated introns
transcript id: XR_795745.3
SIO_010081: LOC104913970
subclass of: SO_0000673
so part of: LOC104913970
location: complement(join(20243..20451,21465..21668,22499..22643))
location: region:20243-22643:-1
so has part: feature:22499-22643:-1:exon
so has part: feature:21465-21668:-1:exon
so has part: feature:20243-20451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22499-22643:-1:exon

position:22499:-1
position: 22499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:21465-21668:-1:exon

position:21465:-1
position: 21465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21668:-1
position: 21668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:20243-20451:-1:exon

position:20451:-1
position: 20451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109370722
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370722
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(22672..30320)
location: region:22672-30320:-1
so has part: feature:22672-30320:-1:exon
subclass of: SO_0000011

109370722
type: Gene
SIO_000068: ncbigene

position:22672:-1
position: 22672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30320:-1
position: 30320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22672-30320:-1:exon

LOC109370722
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370722
product: uncharacterized LOC109370722
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_002121071.2
SIO_010081: LOC109370722
subclass of: SO_0000673
so part of: LOC109370722
location: complement(join(22672..23434,29789..29827,29949..30320))
location: region:22672-30320:-1
so has part: feature:29949-30320:-1:exon
so has part: feature:29789-29827:-1:exon
so has part: feature:22672-23434:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29949-30320:-1:exon

position:29949:-1
position: 29949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29789-29827:-1:exon

position:29789:-1
position: 29789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29827:-1
position: 29827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:22672-23434:-1:exon

position:23434:-1
position: 23434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100539637
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100539637
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 31884..52885
location: region:31884-52885:1
so has part: feature:31884-52885:1:exon
subclass of: SO_0000010

100539637
type: Gene
SIO_000068: ncbigene

position:31884:1
position: 31884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:52885:1
position: 52885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31884-52885:1:exon

LOC100539637
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100539637
product: ATP-dependent RNA helicase DDX25-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010722200.3
SIO_010081: LOC100539637
subclass of: SO_0000673
so part of: LOC100539637
location: join(31884..32107,46020..46155,46226..46318,46425..46527,46882..46996,47575..47752,48084..48321,48879..49042,49545..49733,50793..52885)
location: region:31884-52885:1
so has part: feature:31884-32107:1:exon
so has part: feature:46020-46155:1:exon
so has part: feature:46226-46318:1:exon
so has part: feature:46425-46527:1:exon
so has part: feature:46882-46996:1:exon
so has part: feature:47575-47752:1:exon
so has part: feature:48084-48321:1:exon
so has part: feature:48879-49042:1:exon
so has part: feature:49545-49733:1:exon
so has part: feature:50793-52885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31884-32107:1:exon

position:32107:1
position: 32107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:46020-46155:1:exon

position:46020:1
position: 46020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46155:1
position: 46155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:46226-46318:1:exon

position:46226:1
position: 46226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46318:1
position: 46318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:46425-46527:1:exon

position:46425:1
position: 46425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46527:1
position: 46527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:46882-46996:1:exon

position:46882:1
position: 46882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46996:1
position: 46996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:47575-47752:1:exon

position:47575:1
position: 47575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47752:1
position: 47752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:48084-48321:1:exon

position:48084:1
position: 48084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48321:1
position: 48321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:48879-49042:1:exon

position:48879:1
position: 48879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49042:1
position: 49042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:49545-49733:1:exon

position:49545:1
position: 49545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49733:1
position: 49733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:50793-52885:1:exon

position:50793:1
position: 50793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100539637
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100539637
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:49661..49663,aa:OTHER)
product: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX25-like
translation: MLVVGTLPVGGGVFAPRLDGASNILNSSNSVAGKCFIYVYCARAENLAESSLLNKLLHTSLVENSHHVEVLQQDPSSPLFSIRTFEELHLKKELLRGVYTMGFNRPSKIQANALPILMAHPPQNLIAQSQSGTGKTAAFVLAMLSRVKGAERYPQCLCLAPTYELALQIGHVAEKMGRFCNDIRVTYAVQGNRVSPGTVLEEQIVIGTPGTMLDWCFKRRLLNMRRICMFVLDEADIMIDTQGFSSQSIRIQRALPKNCQMLLFSATFKENLWKFAMQIVSRPIIIKLRQEELTLTNIRQYYFVCRNWEQKYEALCNLYGSITIGQAMIFCQTRRSADWLSVKMIQDGHQVAMLTAELSIMQRADVIQRFRDGKEKVLITTNVCARGIDVAQVTIVVNFSLPTNHQKQPDFETYLHRIRRTRRFGXRSIAFNMVDSHSTHLVRCIEEHFQTKIKRLDPDCMDKLEELENLAKNMA
SIO_010081: LOC100539637
subclass of: SO_0000673
so part of: LOC100539637
location: join(31975..32107,46020..46155,46226..46318,46425..46527,46882..46996,47575..47752,48084..48321,48879..49042,49545..49733,50793..50872)
location: region:31975-50872:1
so has part: feature:31975-32107:1:exon
so has part: feature:46020-46155:1:exon
so has part: feature:46226-46318:1:exon
so has part: feature:46425-46527:1:exon
so has part: feature:46882-46996:1:exon
so has part: feature:47575-47752:1:exon
so has part: feature:48084-48321:1:exon
so has part: feature:48879-49042:1:exon
so has part: feature:49545-49733:1:exon
so has part: feature:50793-50872:1:exon

XP_010720502.1
type: Protein
SIO_000068: ncbiprotein

position:31975:1
position: 31975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50872:1
position: 50872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31975-32107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:46020-46155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:46226-46318:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:46425-46527:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:46882-46996:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47575-47752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:48084-48321:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:48879-49042:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:49545-49733:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:50793-50872:1:exon

LOC104913973
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(65895..>67760)
location: region:65895-67760:-1
so has part: feature:65895-67760:-1:exon
subclass of: SO_0000010

104913973
type: Gene
SIO_000068: ncbigene

position:65895:-1
position: 65895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67760:-1
position: 67760
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65895-67760:-1:exon

LOC104913973
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913973
product: outer dense fiber protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_010722251.2
SIO_010081: LOC104913973
subclass of: SO_0000673
so part of: LOC104913973
location: complement(join(65895..66157,66385..66525,66691..66812,67126..67227,67616..>67760))
location: region:65895-67760:-1
so has part: feature:67616-67760:-1:exon
so has part: feature:67126-67227:-1:exon
so has part: feature:66691-66812:-1:exon
so has part: feature:66385-66525:-1:exon
so has part: feature:65895-66157:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:67616-67760:-1:exon

position:67616:-1
position: 67616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:67126-67227:-1:exon

position:67126:-1
position: 67126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67227:-1
position: 67227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66691-66812:-1:exon

position:66691:-1
position: 66691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66812:-1
position: 66812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:66385-66525:-1:exon

position:66385:-1
position: 66385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66525:-1
position: 66525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:65895-66157:-1:exon

position:66157:-1
position: 66157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913973
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: outer dense fiber protein 3-like
translation: TKPPAAESCGPGPCYFVEPAITRNGKYVAPGAHLCGRPTTETTVTPGPSDYRTEAANRHVFKCPPVQSMAFRREPLRTDRPPGPGTYTLPRLMGPSTACTSASPCYSMRGRSQRGRFDEDLAKIPGPAALPKVAVDAYKTRAPAYTMAARPKPAEGKAVKPGPADYSIGRVTLIKPQAPASTFGIWHSLYTTPLIVE
SIO_010081: LOC104913973
subclass of: SO_0000673
so part of: LOC104913973
location: complement(join(66074..66157,66385..66525,66691..66812,67126..67227,67616..>67760))
location: region:66074-67760:-1
so has part: feature:67616-67760:-1:exon
so has part: feature:67126-67227:-1:exon
so has part: feature:66691-66812:-1:exon
so has part: feature:66385-66525:-1:exon
so has part: feature:66074-66157:-1:exon

XP_010720553.2
type: Protein
SIO_000068: ncbiprotein

position:66074:-1
position: 66074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67616-67760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:67126-67227:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:66691-66812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:66385-66525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66074-66157:-1:exon

LOC104913974
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913974
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 95080..98569
location: region:95080-98569:1
so has part: feature:95080-98569:1:exon

104913974
type: Gene
SIO_000068: ncbigene

position:95080:1
position: 95080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98569:1
position: 98569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95080-98569:1:exon

LOC104913974
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913974
subclass of: SO_0000673
so part of: LOC104913974
location: 95080..95208
location: region:95080-95208:1
so has part: feature:95080-95208:1:exon

position:95208:1
position: 95208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95080-95208:1:exon

LOC104913974
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913974
subclass of: SO_0000673
so part of: LOC104913974
location: 95298..95330
location: region:95298-95330:1
so has part: feature:95298-95330:1:exon

position:95298:1
position: 95298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95330:1
position: 95330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95298-95330:1:exon

LOC104913974
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913974
subclass of: SO_0000673
so part of: LOC104913974
location: 95537..95637
location: region:95537-95637:1
so has part: feature:95537-95637:1:exon

position:95537:1
position: 95537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95637:1
position: 95637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95537-95637:1:exon

LOC104913974
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913974
subclass of: SO_0000673
so part of: LOC104913974
location: 96343..96514
location: region:96343-96514:1
so has part: feature:96343-96514:1:exon

position:96343:1
position: 96343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96514:1
position: 96514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96343-96514:1:exon

LOC104913974
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913974
subclass of: SO_0000673
so part of: LOC104913974
location: 96718..96993
location: region:96718-96993:1
so has part: feature:96718-96993:1:exon

position:96718:1
position: 96718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96993:1
position: 96993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96718-96993:1:exon

LOC104913974
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913974
subclass of: SO_0000673
so part of: LOC104913974
location: 97256..97545
location: region:97256-97545:1
so has part: feature:97256-97545:1:exon

position:97256:1
position: 97256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97545:1
position: 97545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97256-97545:1:exon

LOC104913974
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913974
subclass of: SO_0000673
so part of: LOC104913974
location: 97770..98073
location: region:97770-98073:1
so has part: feature:97770-98073:1:exon

position:97770:1
position: 97770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98073:1
position: 98073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:97770-98073:1:exon

LOC104913974
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913974
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913974
subclass of: SO_0000673
so part of: LOC104913974
location: 98445..98569
location: region:98445-98569:1
so has part: feature:98445-98569:1:exon

position:98445:1
position: 98445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:98445-98569:1:exon

L3MBTL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: L3MBTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(99001..121627)
location: region:99001-121627:-1
so has part: feature:99001-121627:-1:exon
subclass of: SO_0000010

100550774
type: Gene
SIO_000068: ncbigene

position:99001:-1
position: 99001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121627:-1
position: 121627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99001-121627:-1:exon

L3MBTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: L3MBTL1
product: L3MBTL histone methyl-lysine binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010722202.3
SIO_010081: L3MBTL1
subclass of: SO_0000673
so part of: L3MBTL1
location: complement(join(99001..103186,104849..104911,105815..105972,106915..106961,107298..107495,108363..108462,108655..108769,109060..109170,109744..109829,110269..110345,111586..111737,112731..112822,113324..113459,114342..114446,115045..115136,117306..117402,118002..118125,118761..118899,119058..119202,120031..120254,121037..121206,121431..121627))
location: region:99001-121627:-1
so has part: feature:121431-121627:-1:exon
so has part: feature:121037-121206:-1:exon
so has part: feature:120031-120254:-1:exon
so has part: feature:119058-119202:-1:exon
so has part: feature:118761-118899:-1:exon
so has part: feature:118002-118125:-1:exon
so has part: feature:117306-117402:-1:exon
so has part: feature:115045-115136:-1:exon
so has part: feature:114342-114446:-1:exon
so has part: feature:113324-113459:-1:exon
so has part: feature:112731-112822:-1:exon
so has part: feature:111586-111737:-1:exon
so has part: feature:110269-110345:-1:exon
so has part: feature:109744-109829:-1:exon
so has part: feature:109060-109170:-1:exon
so has part: feature:108655-108769:-1:exon
so has part: feature:108363-108462:-1:exon
so has part: feature:107298-107495:-1:exon
so has part: feature:106915-106961:-1:exon
so has part: feature:105815-105972:-1:exon
so has part: feature:104849-104911:-1:exon
so has part: feature:99001-103186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121431-121627:-1:exon

position:121431:-1
position: 121431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121037-121206:-1:exon

position:121037:-1
position: 121037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121206:-1
position: 121206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120031-120254:-1:exon

position:120031:-1
position: 120031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:120254:-1
position: 120254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:119058-119202:-1:exon

position:119058:-1
position: 119058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:119202:-1
position: 119202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:118761-118899:-1:exon

position:118761:-1
position: 118761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118899:-1
position: 118899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:118002-118125:-1:exon

position:118002:-1
position: 118002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118125:-1
position: 118125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:117306-117402:-1:exon

position:117306:-1
position: 117306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117402:-1
position: 117402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:115045-115136:-1:exon

position:115045:-1
position: 115045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:115136:-1
position: 115136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:114342-114446:-1:exon

position:114342:-1
position: 114342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114446:-1
position: 114446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:113324-113459:-1:exon

position:113324:-1
position: 113324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113459:-1
position: 113459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:112731-112822:-1:exon

position:112731:-1
position: 112731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112822:-1
position: 112822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:111586-111737:-1:exon

position:111586:-1
position: 111586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111737:-1
position: 111737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:110269-110345:-1:exon

position:110269:-1
position: 110269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110345:-1
position: 110345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:109744-109829:-1:exon

position:109744:-1
position: 109744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109829:-1
position: 109829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:109060-109170:-1:exon

position:109060:-1
position: 109060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:109170:-1
position: 109170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:108655-108769:-1:exon

position:108655:-1
position: 108655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108769:-1
position: 108769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:108363-108462:-1:exon

position:108363:-1
position: 108363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:108462:-1
position: 108462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:107298-107495:-1:exon

position:107298:-1
position: 107298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107495:-1
position: 107495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:106915-106961:-1:exon

position:106915:-1
position: 106915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106961:-1
position: 106961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:105815-105972:-1:exon

position:105815:-1
position: 105815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105972:-1
position: 105972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:104849-104911:-1:exon

position:104849:-1
position: 104849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:104911:-1
position: 104911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:99001-103186:-1:exon

position:103186:-1
position: 103186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

L3MBTL1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: L3MBTL1
product: L3MBTL histone methyl-lysine binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_795746.3
SIO_010081: L3MBTL1
so part of: L3MBTL1
location: complement(join(99001..99808,102707..103186,104849..104911,105815..105972,106915..106961,107298..107495,108363..108462,108655..108769,109060..109170,109744..109829,110269..110345,111586..111737,112731..112831,113324..113459,114342..114446,115045..115136,117306..117402,118002..118125,118761..118899,119058..119202,120031..120254,121037..121206,121431..121627))
location: region:99001-121627:-1
so has part: feature:121431-121627:-1:exon
so has part: feature:121037-121206:-1:exon
so has part: feature:120031-120254:-1:exon
so has part: feature:119058-119202:-1:exon
so has part: feature:118761-118899:-1:exon
so has part: feature:118002-118125:-1:exon
so has part: feature:117306-117402:-1:exon
so has part: feature:115045-115136:-1:exon
so has part: feature:114342-114446:-1:exon
so has part: feature:113324-113459:-1:exon
so has part: feature:112731-112831:-1:exon
so has part: feature:111586-111737:-1:exon
so has part: feature:110269-110345:-1:exon
so has part: feature:109744-109829:-1:exon
so has part: feature:109060-109170:-1:exon
so has part: feature:108655-108769:-1:exon
so has part: feature:108363-108462:-1:exon
so has part: feature:107298-107495:-1:exon
so has part: feature:106915-106961:-1:exon
so has part: feature:105815-105972:-1:exon
so has part: feature:104849-104911:-1:exon
so has part: feature:102707-103186:-1:exon
so has part: feature:99001-99808:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121431-121627:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121037-121206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120031-120254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119058-119202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118761-118899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118002-118125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117306-117402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:115045-115136:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114342-114446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113324-113459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112731-112831:-1:exon

position:112831:-1
position: 112831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:111586-111737:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110269-110345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109744-109829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:109060-109170:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108655-108769:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:108363-108462:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:107298-107495:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:106915-106961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:105815-105972:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:104849-104911:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:102707-103186:-1:exon

position:102707:-1
position: 102707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:99001-99808:-1:exon

position:99808:-1
position: 99808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

L3MBTL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: L3MBTL1
product: L3MBTL histone methyl-lysine binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010722201.3
SIO_010081: L3MBTL1
subclass of: SO_0000673
so part of: L3MBTL1
location: complement(join(99001..103186,104849..104911,105815..105972,106915..106961,107298..107495,108363..108462,108655..108769,109060..109170,109744..109829,110269..110345,111586..111737,112731..112831,113324..113459,114342..114446,115045..115136,117306..117402,118002..118125,118761..118899,119058..119202,120031..120254,121037..121206,121431..121627))
location: region:99001-121627:-1
so has part: feature:121431-121627:-1:exon
so has part: feature:121037-121206:-1:exon
so has part: feature:120031-120254:-1:exon
so has part: feature:119058-119202:-1:exon
so has part: feature:118761-118899:-1:exon
so has part: feature:118002-118125:-1:exon
so has part: feature:117306-117402:-1:exon
so has part: feature:115045-115136:-1:exon
so has part: feature:114342-114446:-1:exon
so has part: feature:113324-113459:-1:exon
so has part: feature:112731-112831:-1:exon
so has part: feature:111586-111737:-1:exon
so has part: feature:110269-110345:-1:exon
so has part: feature:109744-109829:-1:exon
so has part: feature:109060-109170:-1:exon
so has part: feature:108655-108769:-1:exon
so has part: feature:108363-108462:-1:exon
so has part: feature:107298-107495:-1:exon
so has part: feature:106915-106961:-1:exon
so has part: feature:105815-105972:-1:exon
so has part: feature:104849-104911:-1:exon
so has part: feature:99001-103186:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121431-121627:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121037-121206:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120031-120254:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:119058-119202:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118761-118899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:118002-118125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:117306-117402:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:115045-115136:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:114342-114446:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:113324-113459:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:112731-112831:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:111586-111737:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:110269-110345:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109744-109829:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:109060-109170:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108655-108769:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:108363-108462:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:107298-107495:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:106915-106961:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:105815-105972:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:104849-104911:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:99001-103186:-1:exon

L3MBTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: L3MBTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 1 isoform X2
translation: MDGRSEMEVVRTIKGNAAGEVSVHVVTTESTVQSTHLPTTAFILPANATTINLPTSTLEIQRFPREPPRNTGAERPEKGVGSEPITATVIPQISGVQTCNTVRVLEWKDGVATLPGSNLRFRINEYGTLKVLSADKMPPAEAIKEGHAKKDGESDVAPTSRDNTIVAQDVPEQPKLPTADSICHCDTCGRRHVSDGAREGRGFCSEHCHQQFKERSVIVENAASSTSATEILKPVKKRKRKDYQSPSEEDYESEQMEEKQEELKNSVGDSAISNPEADTWSQHSTEGPGASEEKKEGWSWASYLEEQKAVAAPLDLFQDYQVASQHRNGFKVGMKLEGIDPQHPSMYFILTVAEVCGYRMRLHFDGYSECHDFWLNADSPDIHPAGWFEETGHKLQPPKGYKEEEFSWTNYLKITKAQAAPKHLFVIRNSHEAPPGFEVGMKLEAVDRMNPSLICVATVTDVVDDRFLVHFDNWDDTYDYWCDPSSPYIHPVGWCQEHGKPLTPPQDYPDPDNFIWEKYLKETGASAVPAWAFKVRPPHGFLVNMKLEAVDRRTPSLIRVASVEDVEDHRIKIHFDGWSHVYDFWIDADHPDIHPIGWCSKTGHPLQPPLRPKEPASSAHSGCPTLGCKNIPHTKSSKYSFHHRKCPTPGCDGSGHVTGRFTAHYCLSGCPLAEKNQGRLKADLSDTEASTRKRNLIGFPQRKKSRHHGRGRPPKYRKIQQEDFQTISSDNMHQSLFMSALSAHPDRSLSLCWEQHCKLLPGVAGITATTVAKWTIDEVFSFVQTLTGCEDQAKLFKDEMIDGEAFLLLTQADIVKIMSVKLGPALKIYNAILMFKNADDTLK
SIO_010081: L3MBTL1
subclass of: SO_0000673
so part of: L3MBTL1
location: complement(join(103052..103186,104849..104911,105815..105972,106915..106961,107298..107495,108363..108462,108655..108769,109060..109170,109744..109829,110269..110345,111586..111737,112731..112822,113324..113459,114342..114446,115045..115136,117306..117402,118002..118125,118761..118899,119058..119202,120031..120254,121037..121172))
location: region:103052-121172:-1
so has part: feature:121037-121172:-1:exon
so has part: feature:120031-120254:-1:exon
so has part: feature:119058-119202:-1:exon
so has part: feature:118761-118899:-1:exon
so has part: feature:118002-118125:-1:exon
so has part: feature:117306-117402:-1:exon
so has part: feature:115045-115136:-1:exon
so has part: feature:114342-114446:-1:exon
so has part: feature:113324-113459:-1:exon
so has part: feature:112731-112822:-1:exon
so has part: feature:111586-111737:-1:exon
so has part: feature:110269-110345:-1:exon
so has part: feature:109744-109829:-1:exon
so has part: feature:109060-109170:-1:exon
so has part: feature:108655-108769:-1:exon
so has part: feature:108363-108462:-1:exon
so has part: feature:107298-107495:-1:exon
so has part: feature:106915-106961:-1:exon
so has part: feature:105815-105972:-1:exon
so has part: feature:104849-104911:-1:exon
so has part: feature:103052-103186:-1:exon

XP_010720504.1
type: Protein
SIO_000068: ncbiprotein

position:103052:-1
position: 103052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121172:-1
position: 121172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121037-121172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120031-120254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119058-119202:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118761-118899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118002-118125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117306-117402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:115045-115136:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114342-114446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113324-113459:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112731-112822:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111586-111737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110269-110345:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109744-109829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109060-109170:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:108655-108769:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108363-108462:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:107298-107495:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:106915-106961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:105815-105972:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:104849-104911:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:103052-103186:-1:exon

L3MBTL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: L3MBTL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lethal(3)malignant brain tumor-like protein 1 isoform X1
translation: MDGRSEMEVVRTIKGNAAGEVSVHVVTTESTVQSTHLPTTAFILPANATTINLPTSTLEIQRFPREPPRNTGAERPEKGVGSEPITATVIPQISGVQTCNTVRVLEWKDGVATLPGSNLRFRINEYGTLKVLSADKMPPAEAIKEGHAKKDGESDVAPTSRDNTIVAQDVPEQPKLPTADSICHCDTCGRRHVSDGAREGRGFCSEHCHQQFKERSVIVENAASSTSATEILKPVKKRKRKDYQSPSEEDYESEQMEEKQEELKNSVGDSAISNPEADTWSQHSTEGPGASEEKKEGWSWASYLEEQKAVAAPLDLFQDYQVASQHRNGFKVGMKLEGIDPQHPSMYFILTVAEVCGYRMRLHFDGYSECHDFWLNADSPDIHPAGWFEETGHKLQPPKGVLGYKEEEFSWTNYLKITKAQAAPKHLFVIRNSHEAPPGFEVGMKLEAVDRMNPSLICVATVTDVVDDRFLVHFDNWDDTYDYWCDPSSPYIHPVGWCQEHGKPLTPPQDYPDPDNFIWEKYLKETGASAVPAWAFKVRPPHGFLVNMKLEAVDRRTPSLIRVASVEDVEDHRIKIHFDGWSHVYDFWIDADHPDIHPIGWCSKTGHPLQPPLRPKEPASSAHSGCPTLGCKNIPHTKSSKYSFHHRKCPTPGCDGSGHVTGRFTAHYCLSGCPLAEKNQGRLKADLSDTEASTRKRNLIGFPQRKKSRHHGRGRPPKYRKIQQEDFQTISSDNMHQSLFMSALSAHPDRSLSLCWEQHCKLLPGVAGITATTVAKWTIDEVFSFVQTLTGCEDQAKLFKDEMIDGEAFLLLTQADIVKIMSVKLGPALKIYNAILMFKNADDTLK
SIO_010081: L3MBTL1
subclass of: SO_0000673
so part of: L3MBTL1
location: complement(join(103052..103186,104849..104911,105815..105972,106915..106961,107298..107495,108363..108462,108655..108769,109060..109170,109744..109829,110269..110345,111586..111737,112731..112831,113324..113459,114342..114446,115045..115136,117306..117402,118002..118125,118761..118899,119058..119202,120031..120254,121037..121172))
location: region:103052-121172:-1
so has part: feature:121037-121172:-1:exon
so has part: feature:120031-120254:-1:exon
so has part: feature:119058-119202:-1:exon
so has part: feature:118761-118899:-1:exon
so has part: feature:118002-118125:-1:exon
so has part: feature:117306-117402:-1:exon
so has part: feature:115045-115136:-1:exon
so has part: feature:114342-114446:-1:exon
so has part: feature:113324-113459:-1:exon
so has part: feature:112731-112831:-1:exon
so has part: feature:111586-111737:-1:exon
so has part: feature:110269-110345:-1:exon
so has part: feature:109744-109829:-1:exon
so has part: feature:109060-109170:-1:exon
so has part: feature:108655-108769:-1:exon
so has part: feature:108363-108462:-1:exon
so has part: feature:107298-107495:-1:exon
so has part: feature:106915-106961:-1:exon
so has part: feature:105815-105972:-1:exon
so has part: feature:104849-104911:-1:exon
so has part: feature:103052-103186:-1:exon

XP_010720503.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121037-121172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:120031-120254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:119058-119202:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:118761-118899:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:118002-118125:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:117306-117402:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:115045-115136:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:114342-114446:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:113324-113459:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:112731-112831:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:111586-111737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:110269-110345:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:109744-109829:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:109060-109170:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:108655-108769:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:108363-108462:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:107298-107495:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:106915-106961:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:105815-105972:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:104849-104911:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:103052-103186:-1:exon

SRSF6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SRSF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(141962..144987)
location: region:141962-144987:-1
so has part: feature:141962-144987:-1:exon
subclass of: SO_0000010

100550929
type: Gene
SIO_000068: ncbigene

position:141962:-1
position: 141962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144987:-1
position: 144987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141962-144987:-1:exon

SRSF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SRSF6
product: serine and arginine rich splicing factor 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010722204.3
SIO_010081: SRSF6
subclass of: SO_0000673
so part of: SRSF6
location: complement(join(141962..142435,142555..142644,142991..143199,143428..143555,144816..144823,144932..144987))
location: region:141962-144987:-1
so has part: feature:144932-144987:-1:exon
so has part: feature:144816-144823:-1:exon
so has part: feature:143428-143555:-1:exon
so has part: feature:142991-143199:-1:exon
so has part: feature:142555-142644:-1:exon
so has part: feature:141962-142435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:144932-144987:-1:exon

position:144932:-1
position: 144932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:144816-144823:-1:exon

position:144816:-1
position: 144816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144823:-1
position: 144823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:143428-143555:-1:exon

position:143428:-1
position: 143428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143555:-1
position: 143555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142991-143199:-1:exon

position:142991:-1
position: 142991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:143199:-1
position: 143199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142555-142644:-1:exon

position:142555:-1
position: 142555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:142644:-1
position: 142644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:141962-142435:-1:exon

position:142435:-1
position: 142435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRSF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SRSF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/arginine-rich splicing factor 6
translation: MRADTPPYAPLFHRPARAASRSGGGGGYSSRRQSGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRKIRLVEDKPRSSHRRSYSCSRSRSRSRRRSRSRSRRSRSSRSRSRSVSKSRSRSKSRSRSKDRSRSRSKSRKSRSKSKSKPKSDRGSRSHSRSKEKSEKSRSRSRSRSPKENGKGDTKSKSRSRSRSRSNSPQQQPSAKARSESPPKRAASRSRSRSRSKSRSRSRSSSRD
SIO_010081: SRSF6
subclass of: SO_0000673
so part of: SRSF6
location: complement(join(142078..142435,142555..142644,142991..143199,143428..143555,144816..144823,144932..144987))
location: region:142078-144987:-1
so has part: feature:144932-144987:-1:exon
so has part: feature:144816-144823:-1:exon
so has part: feature:143428-143555:-1:exon
so has part: feature:142991-143199:-1:exon
so has part: feature:142555-142644:-1:exon
so has part: feature:142078-142435:-1:exon

XP_010720506.3
type: Protein
SIO_000068: ncbiprotein

position:142078:-1
position: 142078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:144932-144987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:144816-144823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:143428-143555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142991-143199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142555-142644:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:142078-142435:-1:exon

EPB41L1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 220010..280216
location: region:220010-280216:1
so has part: feature:220010-280216:1:exon
subclass of: SO_0000010

100551078
type: Gene
SIO_000068: ncbigene

position:220010:1
position: 220010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280216:1
position: 280216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:220010-280216:1:exon

EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010722205.3
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(220010..220344,221348..221397,247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,266152..268800,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:220010-280216:1
so has part: feature:220010-220344:1:exon
so has part: feature:221348-221397:1:exon
so has part: feature:247563-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
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urn:…
SIO_000300: 1
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position:220344:1
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urn:…
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urn:…
SIO_000300: 3
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position:247563:1
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position:247752:1
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urn:…
SIO_000300: 4
SIO_000628: feature:248522-248686:1:exon

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position:248686:1
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urn:…
SIO_000300: 5
SIO_000628: feature:251433-251537:1:exon

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position:251537:1
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urn:…
SIO_000300: 6
SIO_000628: feature:251620-251662:1:exon

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position:251662:1
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urn:…
SIO_000300: 7
SIO_000628: feature:252680-252755:1:exon

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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:253400-253487:1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:254537-254689:1:exon

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urn:…
SIO_000300: 11
SIO_000628: feature:255480-255577:1:exon

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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:273178-273240:1:exon

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SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
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reference: sequence
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EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031556510.1
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,266152..268800,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,277169..280216)
location: region:247563-280216:1
so has part: feature:247563-247752:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:247563-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

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SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:266152-268800:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269339-269446:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:277169-280216:1:exon

EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019622114.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,266152..268800,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:247563-280216:1
so has part: feature:247563-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
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so has part: feature:266152-268800:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:247563-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

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SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:266152-268800:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:277169-280216:1:exon

EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019622111.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,266152..268797,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:247563-280216:1
so has part: feature:247563-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:247563-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

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SIO_000300: 5
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SIO_000300: 6
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urn:…
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urn:…
SIO_000300: 10
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SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

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SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:266152-268797:1:exon

position:268797:1
position: 268797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:269339-269446:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:277169-280216:1:exon

EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_019622115.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
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EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019622116.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:247563-280216:1
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EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_019622113.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,266152..268800,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:247563-280216:1
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urn:…
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EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031556511.1
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:247563-280216:1
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urn:…
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SIO_000628: feature:277169-280216:1:exon

EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_019622117.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:247563-280216:1
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urn:…
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SIO_000628: feature:277169-280216:1:exon

EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_019622119.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:247563-280216:1
so has part: feature:247563-247752:1:exon
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so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-280216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247563-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:277169-280216:1:exon

EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_019622112.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,259652..259843,261160..261258,266152..268800,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:247563-280216:1
so has part: feature:247563-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:261160-261258:1:exon
so has part: feature:266152-268800:1:exon
so has part: feature:269339-269446:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-280216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247563-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:266152-268800:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269339-269446:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:277169-280216:1:exon

EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019622120.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,259652..259843,261160..261258,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:247563-280216:1
so has part: feature:247563-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:261160-261258:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-280216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247563-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:277169-280216:1:exon

EPB41L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPB41L1
product: erythrocyte membrane protein band 4.1 like 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 193 samples with support for all annotated introns
transcript id: XM_019622118.2
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247563..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,259652..259843,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..280216)
location: region:247563-280216:1
so has part: feature:247563-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-280216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:247563-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:277169-280216:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X6
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKPEHETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASERMEEDTLDDFASEHGASLSMESFTQKSLVSSPEGSEHWVFIERETTRLEEVALKKALRVKKEEGRAGTSEVKMSVSKLKVEMAVGKAKEVAGQEEPADAHLDTWKRAKMIASPEDFESVWEDETCEKETGEEPSTEAKCLTCETAEESKERVEGITSSEMSLSRPYQEPEERQRAEALGLGPLHGESKMVSEEHVSAAFRKQDARAPTAITEVIKIKVKSGEDNTETSATQRIIYLGDLEGEEDNKMHLLTEAGGQLSSAVRQETMVNRPGEGPRPMQCLGERSQCNSSVYAQLEAVSEKPSVLPDQPETGCDETSPVRQPRQPSSEQEEGFSVQQEQESVSLTSCKTLEGDEATLCSQEVGSDEKDLQRSVRGLKPCALKRAEDPRQSPGQNPTAGEQWGLDVSTEEWGLSERSLPGGGEEKSSTMVLQMEEIETKLPPSAVPQQNSPRATVGLEEDEPSIPTPGTPPQQMSSVEPAQEMEPEGKDLSQSTSLLRGVGTPEDMNPSTEVACKEGSPAVGKEALKDISPVTEVEVPRDVSPESVEKKQDVHFATRKTYQDANPIARGPHQSKGSAVETILLRDPATGEVVQKSDHTAAKGTLGATEEVLQEEQLVIKGLSQNIRPTLGKLMGGGGMEQLPTKAEDQEQKAETLIEHLPQKDPKSGGLLPADTNAQKPACDVEFNAGQALQGGSSMAGETARDLALEQPLQSPGDADVLHSHSPITGLCQGNKLYQLSTFMYEGGEEVQVNSGIQKRESGPLMCIAASEAVCQEHRGVTEAPLLGSWQDSESYKKTSVASKIKMFEQNEAEQRTAQEGQEHAPETETPAKIKGKTNLSQDTILNTVPISPPGVAGAPVGSMSSVDSFAFKQGADPEDSSQLLSLKEDVSVDLEHEGEDSADLASSDSGCELTLAEAVSKSQEPSGEEKDLSDLSLKSTLKEENLKTAVPVVLKRAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,266152..268800,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:261160-261258:1:exon
so has part: feature:266152-268800:1:exon
so has part: feature:269339-269446:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_010720507.1
type: Protein
SIO_000068: ncbiprotein

position:247576:1
position: 247576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277177:1
position: 277177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:266152-268800:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269339-269446:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X5
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKPEHETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASERMEEDTLDDFASEHGASLSMESFTQKSLVSSPEGSEHWVFIERETTRLEEVALKKALRVKKEEGRAGTSEVKMSVSKLKVEMAVGKAKEVAGQEEPADAHLDTWKRAKMIASPEDFESVWEDETCEKETGEEPSTEAKCLTCETAEESKERVEGITSSEMSLSRPYQEPEERQRAEALGLGPLHGESKMVSEEHVSAAFRKQDARAPTAITEVIKIKVKSGEDNTETSATQRIIYLGDLEGEEDNKMHLLTEAGGQLSSAVRQETMVNRPGEGPRPMQCLGERSQCNSSVYAQLEAVSEKPSVLPDQPETGCDETSPVRQPRQPSSEQEEGFSVQQEQESVSLTSCKTLEGDEATLCSQEVGSDEKDLQRSVRGLKPCALKRAEDPRQSPGQNPTAGEQWGLDVSTEEWGLSERSLPGGGEEKSSTMVLQMEEIETKLPPSAVPQQNSPRATVGLEEDEPSIPTPGTPPQQMSSVEPAQEMEPEGKDLSQSTSLLRGVGTPEDMNPSTEVACKEGSPAVGKEALKDISPVTEVEVPRDVSPESVEKKQDVHFATRKTYQDANPIARGPHQSKGSAVETILLRDPATGEVVQKSDHTAAKGTLGATEEVLQEEQLVIKGLSQNIRPTLGKLMGGGGMEQLPTKAEDQEQKAETLIEHLPQKDPKSGGLLPADTNAQKPACDVEFNAGQALQGGSSMAGETARDLALEQPLQSPGDADVLHSHSPITGLCQGNKLYQLSTFMYEGGEEVQVNSGIQKRESGPLMCIAASEAVCQEHRGVTEAPLLGSWQDSESYKKTSVASKIKMFEQNEAEQRTAQEGQEHAPETETPAKIKGKTNLSQDTILNTVPISPPGVAGAPVGSMSSVDSFAFKQGADPEDSSQLLSLKEDVSVDLEHEGEDSADLASSDSGCELTLAEAVSKSQEPSGEEKDLSDLSLKSTLKEENLKTAVPVVLKRAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,266152..268800,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:261160-261258:1:exon
so has part: feature:266152-268800:1:exon
so has part: feature:269339-269446:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:277169-277177:1:exon

XP_031412370.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:266152-268800:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269339-269446:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X4
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKPEHETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASERMEEDTLDDFASEHGASLSMESFTQKSLVSSPEGSEHWVFIERETTRLEEVALKKALRVKKEEGRAGTSEVKMSVSKLKVEMAVGKAKEVAGQEEPADAHLDTWKRAKMIASPEDFESVWEDETCEKETGEEPSTEAKCLTCETAEESKERVEGITSSEMSLSRPYQEPEERQRAEALGLGPLHGESKMVSEEHVSAAFRKQDARAPTAITEVIKIKVKSGEDNTETSATQRIIYLGDLEGEEDNKMHLLTEAGGQLSSAVRQETMVNRPGEGPRPMQCLGERSQCNSSVYAQLEAVSEKPSVLPDQPETGCDETSPVRQPRQPSSEQEEGFSVQQEQESVSLTSCKTLEGDEATLCSQEVGSDEKDLQRSVRGLKPCALKRAEDPRQSPGQNPTAGEQWGLDVSTEEWGLSERSLPGGGEEKSSTMVLQMEEIETKLPPSAVPQQNSPRATVGLEEDEPSIPTPGTPPQQMSSVEPAQEMEPEGKDLSQSTSLLRGVGTPEDMNPSTEVACKEGSPAVGKEALKDISPVTEVEVPRDVSPESVEKKQDVHFATRKTYQDANPIARGPHQSKGSAVETILLRDPATGEVVQKSDHTAAKGTLGATEEVLQEEQLVIKGLSQNIRPTLGKLMGGGGMEQLPTKAEDQEQKAETLIEHLPQKDPKSGGLLPADTNAQKPACDVEFNAGQALQGGSSMAGETARDLALEQPLQSPGDADVLHSHSPITGLCQGNKLYQLSTFMYEGGEEVQVNSGIQKRESGPLMCIAASEAVCQEHRGVTEAPLLGSWQDSESYKKTSVASKIKMFEQNEAEQRTAQEGQEHAPETETPAKIKGKTNLSQDTILNTVPISPPGVAGAPVGSMSSVDSFAFKQGADPEDSSQLLSLKEDVSVDLEHEGEDSADLASSDSGCELTLAEAVRAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,266152..268800,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:261160-261258:1:exon
so has part: feature:266152-268800:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_019477659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:266152-268800:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X1
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKPEHETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASERMEEDTLDDFASEHGASLSMESFTQKSLVSSPEGSEHWVFIERETTRLEEVALKKALRVKKEEGRAGTSEVKMSVSKLKVEMAVGKAKEVAGQEEPADAHLDTWKRAKMIASPEDFESVWEDETCEKETGEEPSTEAKCLTCETAEESKERVEGITSSEMSLSRPYQEPEERQRAEALGLGPLHGESKMVSEEHVSAAFRKQDARAPTAITEVIKIKVKSGEDNTETSATQRIIYLGDLEGEEDNKMHLLTEAGGQLSSAVRQETMVNRPGEGPRPMQCLGERSQCNSSVYAQLEAVSEKPSVLPDQPETGCDETSPVRQPRQPSSEQEEGFSVQQEQESVSLTSCKTLEGDEATLCSQEVGSDEKDLQRSVRGLKPCALKRAEDPRQSPGQNPTAGEQWGLDVSTEEWGLSERSLPGGGEEKSSTMVLQMEEIETKLPPSAVPQQNSPRATVGLEEDEPSIPTPGTPPQQMSSVEPAQEMEPEGKDLSQSTSLLRGVGTPEDMNPSTEVACKEGSPAVGKEALKDISPVTEVEVPRDVSPESVEKKQDVHFATRKTYQDANPIARGPHQSKGSAVETILLRDPATGEVVQKSDHTAAKGTLGATEEVLQEEQLVIKGLSQNIRPTLGKLMGGGGMEQLPTKAEDQEQKAETLIEHLPQKDPKSGGLLPADTNAQKPACDVEFNAGQALQGGSSMAGETARDLALEQPLQSPGDADVLHSHSPITGLCQGNKLYQLSTFMYEGGEEVQVNSGIQKRESGPLMCIAASEAVCQEHRGVTEAPLLGSWQDSESYKKTSVASKIKMFEQNEAEQRTAQEGQEHAPETETPAKIKGKTNLSQDTILNTVPISPPGVAGAPVGSMSSVDSFAFKQGADPEDSSQLLSLKEDVSVDLEHEGEDSADLASSDSGCELTLAEASKSQEPSGEEKDLSDLSLKSTLKEENLKTAVPVVLKRAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,266152..268797,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:261160-261258:1:exon
so has part: feature:266152-268797:1:exon
so has part: feature:269339-269446:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_019477656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:266152-268797:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:269339-269446:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X7
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKPEHETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASERMEEDTLDDFASEHGASLSMESFTQKSLVSSPESKSQEPSGEEKDLSDLSLKSTLKEENLKTAVPVVLKRAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:261160-261258:1:exon
so has part: feature:269339-269446:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_019477660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269339-269446:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X9
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKPEHETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASERMEEDTLDDFASEHGASLSMESFTQKSLVSSPERAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,261160..261258,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:261160-261258:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_019477661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X3
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKPEHETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASEGSEHWVFIERETTRLEEVALKKALRVKKEEGRAGTSEVKMSVSKLKVEMAVGKAKEVAGQEEPADAHLDTWKRAKMIASPEDFESVWEDETCEKETGEEPSTEAKCLTCETAEESKERVEGITSSEMSLSRPYQEPEERQRAEALGLGPLHGESKMVSEEHVSAAFRKQDARAPTAITEVIKIKVKSGEDNTETSATQRIIYLGDLEGEEDNKMHLLTEAGGQLSSAVRQETMVNRPGEGPRPMQCLGERSQCNSSVYAQLEAVSEKPSVLPDQPETGCDETSPVRQPRQPSSEQEEGFSVQQEQESVSLTSCKTLEGDEATLCSQEVGSDEKDLQRSVRGLKPCALKRAEDPRQSPGQNPTAGEQWGLDVSTEEWGLSERSLPGGGEEKSSTMVLQMEEIETKLPPSAVPQQNSPRATVGLEEDEPSIPTPGTPPQQMSSVEPAQEMEPEGKDLSQSTSLLRGVGTPEDMNPSTEVACKEGSPAVGKEALKDISPVTEVEVPRDVSPESVEKKQDVHFATRKTYQDANPIARGPHQSKGSAVETILLRDPATGEVVQKSDHTAAKGTLGATEEVLQEEQLVIKGLSQNIRPTLGKLMGGGGMEQLPTKAEDQEQKAETLIEHLPQKDPKSGGLLPADTNAQKPACDVEFNAGQALQGGSSMAGETARDLALEQPLQSPGDADVLHSHSPITGLCQGNKLYQLSTFMYEGGEEVQVNSGIQKRESGPLMCIAASEAVCQEHRGVTEAPLLGSWQDSESYKKTSVASKIKMFEQNEAEQRTAQEGQEHAPETETPAKIKGKTNLSQDTILNTVPISPPGVAGAPVGSMSSVDSFAFKQGADPEDSSQLLSLKEDVSVDLEHEGEDSADLASSDSGCELTLAEAVSKSQEPSGEEKDLSDLSLKSTLKEENLKTAVPVVLKRAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,266152..268800,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:266152-268800:1:exon
so has part: feature:269339-269446:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_019477658.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:266152-268800:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269339-269446:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X8
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKPEHETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASESKSQEPSGEEKDLSDLSLKSTLKEENLKTAVPVVLKRAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:269339-269446:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_031412371.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269339-269446:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X10
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKPEHETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASERAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_019477662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X12
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKPEHETTPRHKQEFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,257566..257601,259652..259843,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:257566-257601:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_019477664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:257566-257601:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X2
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASERMEEDTLDDFASEHGASLSMESFTQKSLVSSPEGSEHWVFIERETTRLEEVALKKALRVKKEEGRAGTSEVKMSVSKLKVEMAVGKAKEVAGQEEPADAHLDTWKRAKMIASPEDFESVWEDETCEKETGEEPSTEAKCLTCETAEESKERVEGITSSEMSLSRPYQEPEERQRAEALGLGPLHGESKMVSEEHVSAAFRKQDARAPTAITEVIKIKVKSGEDNTETSATQRIIYLGDLEGEEDNKMHLLTEAGGQLSSAVRQETMVNRPGEGPRPMQCLGERSQCNSSVYAQLEAVSEKPSVLPDQPETGCDETSPVRQPRQPSSEQEEGFSVQQEQESVSLTSCKTLEGDEATLCSQEVGSDEKDLQRSVRGLKPCALKRAEDPRQSPGQNPTAGEQWGLDVSTEEWGLSERSLPGGGEEKSSTMVLQMEEIETKLPPSAVPQQNSPRATVGLEEDEPSIPTPGTPPQQMSSVEPAQEMEPEGKDLSQSTSLLRGVGTPEDMNPSTEVACKEGSPAVGKEALKDISPVTEVEVPRDVSPESVEKKQDVHFATRKTYQDANPIARGPHQSKGSAVETILLRDPATGEVVQKSDHTAAKGTLGATEEVLQEEQLVIKGLSQNIRPTLGKLMGGGGMEQLPTKAEDQEQKAETLIEHLPQKDPKSGGLLPADTNAQKPACDVEFNAGQALQGGSSMAGETARDLALEQPLQSPGDADVLHSHSPITGLCQGNKLYQLSTFMYEGGEEVQVNSGIQKRESGPLMCIAASEAVCQEHRGVTEAPLLGSWQDSESYKKTSVASKIKMFEQNEAEQRTAQEGQEHAPETETPAKIKGKTNLSQDTILNTVPISPPGVAGAPVGSMSSVDSFAFKQGADPEDSSQLLSLKEDVSVDLEHEGEDSADLASSDSGCELTLAEAVSKSQEPSGEEKDLSDLSLKSTLKEENLKTAVPVVLKRAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,259652..259843,261160..261258,266152..268800,269339..269446,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:261160-261258:1:exon
so has part: feature:266152-268800:1:exon
so has part: feature:269339-269446:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_019477657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:266152-268800:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:269339-269446:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X13
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASERMEEDTLDDFASEHGASLSMESFTQKSLVSSPERAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,259652..259843,261160..261258,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:261160-261258:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_019477665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:261160-261258:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:277169-277177:1:exon

EPB41L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPB41L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: band 4.1-like protein 1 isoform X11
translation: MTTETGPDSEVKNVQEEAPQQQLEAATHGPAATAAGIASREAEASEKPGAQPDSRNTEPGTDMEEKDYSETDGLSDKTTPSKTQKSPQKINRKVKSALCRVTLLDASEYECEVEKHARGQVLFDMVCEHLNLLEKDYFGLTFCDSDSQKNWLDPSKEIKKQIRSGPWNFAFTVKFYPPDPAQLMEDITRYYLCLQLRADIITGRLPCSFVTHALLGSYAVQAELGDYDAEEHVGNYVSELRFAPNQTRELEERIMELHKTYRGMTPGEAEIHFLENAKKLSMYGVDLHHAKDSEGIDIMLGVCANGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEYEQFESTIGFKLPNHRSAKRLWKVCIEHHTFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDRPAPFFERSSSKRYTMSRSLDGEFSRPASVSENHDAGAEGEKQEEDGEFGSGRRSETEDEEVTTPTKIKELKFLDKPEDVLLKHQASINELKRTLKEPNSKLVHRDRDRRLPSSPASSSPKHEDETPKGTPEKASERAGLREGTEEKAKPPRHRAPESDTGDEEQDQEKDSVFLKDNHLAIERKCSSITVSSTSSLEAEVDFTVIGDFHGTAFEDISRSLPELDKDKSEMEDEGLVSFQHTDKVVPGLEEDGKAREKVAQPSPDISQLESPAPKTDALTVSLGPGTKKTEDASAAHQISTPEAAQVEGGMPGSGDASASVRAVTTETTPATSDNATKPGKGAGPTSELCSVSPISSSSAGKEVLTSIFSATAETLSTSTTTHVTKTVKGGFSETRIEKRIIITGDEDVDQDQALALAIKEAKLQHPDMLVTKAVVYRETESFPEERDKKPQES
SIO_010081: EPB41L1
subclass of: SO_0000673
so part of: EPB41L1
location: join(247576..247752,248522..248686,251433..251537,251620..251662,252680..252755,253086..253304,253400..253487,254537..254689,255480..255577,256094..256269,256694..256842,259652..259843,270591..270989,272371..272478,272881..272961,273178..273240,273520..273615,274797..274877,275813..275929,277169..277177)
location: region:247576-277177:1
so has part: feature:247576-247752:1:exon
so has part: feature:248522-248686:1:exon
so has part: feature:251433-251537:1:exon
so has part: feature:251620-251662:1:exon
so has part: feature:252680-252755:1:exon
so has part: feature:253086-253304:1:exon
so has part: feature:253400-253487:1:exon
so has part: feature:254537-254689:1:exon
so has part: feature:255480-255577:1:exon
so has part: feature:256094-256269:1:exon
so has part: feature:256694-256842:1:exon
so has part: feature:259652-259843:1:exon
so has part: feature:270591-270989:1:exon
so has part: feature:272371-272478:1:exon
so has part: feature:272881-272961:1:exon
so has part: feature:273178-273240:1:exon
so has part: feature:273520-273615:1:exon
so has part: feature:274797-274877:1:exon
so has part: feature:275813-275929:1:exon
so has part: feature:277169-277177:1:exon

XP_019477663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:247576-247752:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248522-248686:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251433-251537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:251620-251662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:252680-252755:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:253086-253304:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:253400-253487:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254537-254689:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:255480-255577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:256094-256269:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:256694-256842:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259652-259843:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:270591-270989:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272371-272478:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:272881-272961:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:273178-273240:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:273520-273615:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:274797-274877:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:275813-275929:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:277169-277177:1:exon

LOC109370723
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370723
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 281417..308246
location: region:281417-308246:1
so has part: feature:281417-308246:1:exon
subclass of: SO_0000011

109370723
type: Gene
SIO_000068: ncbigene

position:281417:1
position: 281417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308246:1
position: 308246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281417-308246:1:exon

LOC109370723
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370723
product: uncharacterized LOC109370723, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002121072.1
SIO_010081: LOC109370723
subclass of: SO_0000673
so part of: LOC109370723
location: join(281417..282310,287104..304837,305202..308246)
location: region:281417-308246:1
so has part: feature:281417-282310:1:exon
so has part: feature:287104-304837:1:exon
so has part: feature:305202-308246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281417-282310:1:exon

position:282310:1
position: 282310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:287104-304837:1:exon

position:287104:1
position: 287104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304837:1
position: 304837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:305202-308246:1:exon

position:305202:1
position: 305202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109370723
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370723
product: uncharacterized LOC109370723, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002121075.1
SIO_010081: LOC109370723
subclass of: SO_0000673
so part of: LOC109370723
location: join(281417..282310,287104..304837,305202..305500,305581..308246)
location: region:281417-308246:1
so has part: feature:281417-282310:1:exon
so has part: feature:287104-304837:1:exon
so has part: feature:305202-305500:1:exon
so has part: feature:305581-308246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281417-282310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:287104-304837:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:305202-305500:1:exon

position:305500:1
position: 305500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:305581-308246:1:exon

position:305581:1
position: 305581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLGAP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DLGAP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 358985..492768
location: region:358985-492768:1
so has part: feature:358985-492768:1:exon
subclass of: SO_0000010

100549591
type: Gene
SIO_000068: ncbigene

position:358985:1
position: 358985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492768:1
position: 492768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358985-492768:1:exon

DLGAP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DLGAP4
product: DLG associated protein 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031556513.1
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: join(358985..359106,422072..422165,428940..429982,431321..431491,436613..436830,439570..439684,442511..442561,443631..443874,483278..483639,485042..485133,485546..485955,487604..487695,490006..490158,490942..491046)
location: region:358985-491046:1
so has part: feature:358985-359106:1:exon
so has part: feature:422072-422165:1:exon
so has part: feature:428940-429982:1:exon
so has part: feature:431321-431491:1:exon
so has part: feature:436613-436830:1:exon
so has part: feature:439570-439684:1:exon
so has part: feature:442511-442561:1:exon
so has part: feature:443631-443874:1:exon
so has part: feature:483278-483639:1:exon
so has part: feature:485042-485133:1:exon
so has part: feature:485546-485955:1:exon
so has part: feature:487604-487695:1:exon
so has part: feature:490006-490158:1:exon
so has part: feature:490942-491046:1:exon

position:491046:1
position: 491046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358985-359106:1:exon

position:359106:1
position: 359106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:422072-422165:1:exon

position:422072:1
position: 422072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422165:1
position: 422165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:428940-429982:1:exon

position:428940:1
position: 428940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429982:1
position: 429982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:431321-431491:1:exon

position:431321:1
position: 431321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431491:1
position: 431491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:436613-436830:1:exon

position:436613:1
position: 436613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436830:1
position: 436830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:439570-439684:1:exon

position:439570:1
position: 439570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439684:1
position: 439684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:442511-442561:1:exon

position:442511:1
position: 442511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442561:1
position: 442561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:443631-443874:1:exon

position:443631:1
position: 443631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443874:1
position: 443874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:483278-483639:1:exon

position:483278:1
position: 483278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483639:1
position: 483639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:485042-485133:1:exon

position:485042:1
position: 485042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485133:1
position: 485133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:485546-485955:1:exon

position:485546:1
position: 485546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485955:1
position: 485955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:487604-487695:1:exon

position:487604:1
position: 487604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487695:1
position: 487695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:490006-490158:1:exon

position:490006:1
position: 490006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490158:1
position: 490158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:490942-491046:1:exon

position:490942:1
position: 490942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLGAP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DLGAP4
product: DLG associated protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010722215.3
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: join(358992..359106,422072..422165,428940..429982,431321..431491,436613..436830,439570..439684,442511..442561,443631..443874,483278..483639,485042..485133,485546..485955,487604..487695,490006..490158,490953..492768)
location: region:358992-492768:1
so has part: feature:358992-359106:1:exon
so has part: feature:422072-422165:1:exon
so has part: feature:428940-429982:1:exon
so has part: feature:431321-431491:1:exon
so has part: feature:436613-436830:1:exon
so has part: feature:439570-439684:1:exon
so has part: feature:442511-442561:1:exon
so has part: feature:443631-443874:1:exon
so has part: feature:483278-483639:1:exon
so has part: feature:485042-485133:1:exon
so has part: feature:485546-485955:1:exon
so has part: feature:487604-487695:1:exon
so has part: feature:490006-490158:1:exon
so has part: feature:490953-492768:1:exon

position:358992:1
position: 358992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358992-359106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422072-422165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428940-429982:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431321-431491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436613-436830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:439570-439684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:442511-442561:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:443631-443874:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:483278-483639:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485042-485133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:485546-485955:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:487604-487695:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490006-490158:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:490953-492768:1:exon

position:490953:1
position: 490953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLGAP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DLGAP4
product: DLG associated protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010722216.3
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: join(358993..359106,422072..422165,428940..429982,431321..431491,436613..436830,439570..439684,443631..443874,483278..483639,485042..485133,485546..485955,487604..487695,490006..490158,490953..492768)
location: region:358993-492768:1
so has part: feature:358993-359106:1:exon
so has part: feature:422072-422165:1:exon
so has part: feature:428940-429982:1:exon
so has part: feature:431321-431491:1:exon
so has part: feature:436613-436830:1:exon
so has part: feature:439570-439684:1:exon
so has part: feature:443631-443874:1:exon
so has part: feature:483278-483639:1:exon
so has part: feature:485042-485133:1:exon
so has part: feature:485546-485955:1:exon
so has part: feature:487604-487695:1:exon
so has part: feature:490006-490158:1:exon
so has part: feature:490953-492768:1:exon

position:358993:1
position: 358993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358993-359106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422072-422165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428940-429982:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431321-431491:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:436613-436830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:439570-439684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443631-443874:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:483278-483639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485042-485133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485546-485955:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487604-487695:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:490006-490158:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490953-492768:1:exon

DLGAP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DLGAP4
product: DLG associated protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010722217.3
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: join(358994..359106,422072..422165,428940..429982,430581..430634,436613..436830,439570..439684,442511..442561,443631..443874,483278..483639,485042..485133,485546..485955,487604..487695,490006..490158,490953..492768)
location: region:358994-492768:1
so has part: feature:358994-359106:1:exon
so has part: feature:422072-422165:1:exon
so has part: feature:428940-429982:1:exon
so has part: feature:430581-430634:1:exon
so has part: feature:436613-436830:1:exon
so has part: feature:439570-439684:1:exon
so has part: feature:442511-442561:1:exon
so has part: feature:443631-443874:1:exon
so has part: feature:483278-483639:1:exon
so has part: feature:485042-485133:1:exon
so has part: feature:485546-485955:1:exon
so has part: feature:487604-487695:1:exon
so has part: feature:490006-490158:1:exon
so has part: feature:490953-492768:1:exon

position:358994:1
position: 358994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358994-359106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422072-422165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428940-429982:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:430581-430634:1:exon

position:430581:1
position: 430581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430634:1
position: 430634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:436613-436830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:439570-439684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:442511-442561:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:443631-443874:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:483278-483639:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485042-485133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:485546-485955:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:487604-487695:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490006-490158:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:490953-492768:1:exon

DLGAP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DLGAP4
product: DLG associated protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_003211890.4
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: join(358995..359106,422072..422165,428940..429982,436613..436830,439570..439684,442511..442561,443631..443874,483278..483639,485042..485133,485546..485955,487604..487695,490006..490158,490953..492768)
location: region:358995-492768:1
so has part: feature:358995-359106:1:exon
so has part: feature:422072-422165:1:exon
so has part: feature:428940-429982:1:exon
so has part: feature:436613-436830:1:exon
so has part: feature:439570-439684:1:exon
so has part: feature:442511-442561:1:exon
so has part: feature:443631-443874:1:exon
so has part: feature:483278-483639:1:exon
so has part: feature:485042-485133:1:exon
so has part: feature:485546-485955:1:exon
so has part: feature:487604-487695:1:exon
so has part: feature:490006-490158:1:exon
so has part: feature:490953-492768:1:exon

position:358995:1
position: 358995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358995-359106:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422072-422165:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:428940-429982:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:436613-436830:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439570-439684:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:442511-442561:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:443631-443874:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:483278-483639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485042-485133:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485546-485955:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:487604-487695:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:490006-490158:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:490953-492768:1:exon

DLGAP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DLGAP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 4 isoform X3
translation: MKGLGDNRSRHLSDNLDSPQDSLYAPQDRNPYLLSPTDSFTMDPRFPAQNTLHGDCLLPLNNQISNSSTFPRIHYNSHFEVPDENPFPSHAQATKINRLPANLLDQFEKQLPIHRDGFSTLQFQRSDAKHRSESPGRIRHLVHSVQKLFAKSQSLEGPTKGNVNGKKGADDPKQNRRSKSKDRAKTSEPKRRTRSNISGWWSSDDNLDSDTCSYRNPMGLMTLGRQPDHSQPKYFMHAYNTISEHMLKSSKSNNDLKVTPCTNIPINNDSNYIKRGSWSTLTLSHAREVCQKASATIDKALLKSKSCHQDLAYHYLQDVPARPVSPAPQSFPGVLVPQGEWNNTLSRDKDSEIPCRRMRSGSYIKAMGDDDSEDSETSPKPSPKTAARRQSYLKATQQSLSEQSTTQRSLDRLDSVEILLPPKFPTWEEEYNQISDSVNESSCINQIFGPPSLIPQIFTHGEQAREPELGEQYEAVCDSTYSEAESAAAEVLDLPLPSYFRSRSHSYLRAIQAGCSQDEDTSSVRSISPPPAGSLSGSRTLPTNSSSCLVAYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDSQDHKSEVTSQSGLSNSSDSLDSTRTPSITRGSIVTPARDTPELPQKNATLKSDKGTLTSEEPKAENVPKRKLSSIGIQVDCLQPVVKEEPPPPVTKFQSIGVQVEDEWRNSHSRSMSSKQDTDSDTQEPNNSSCKSSERSVAECPQHNNSAGVDTSTRQPAKPSQIKRNLSYGDNTDPALEPSSLPPPDPWLETSSASPSEPTQPGACRRDGFWFLKLLQAETERLEGWCRQMDQETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFHGLCEQNLNPNANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLAETPERKEEKKPPPPVPKKPAKSKSQLNRDKASDSDKQRQEARKRLMAAKRAASVRQNSATESADSIEIYVPEAQTRL
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: join(429032..429982,430581..430634,436613..436830,439570..439684,442511..442561,443631..443874,483278..483639,485042..485133,485546..485955,487604..487695,490006..490158,490953..491168)
location: region:429032-491168:1
so has part: feature:429032-429982:1:exon
so has part: feature:430581-430634:1:exon
so has part: feature:436613-436830:1:exon
so has part: feature:439570-439684:1:exon
so has part: feature:442511-442561:1:exon
so has part: feature:443631-443874:1:exon
so has part: feature:483278-483639:1:exon
so has part: feature:485042-485133:1:exon
so has part: feature:485546-485955:1:exon
so has part: feature:487604-487695:1:exon
so has part: feature:490006-490158:1:exon
so has part: feature:490953-491168:1:exon

XP_010720519.1
type: Protein
SIO_000068: ncbiprotein

position:429032:1
position: 429032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491168:1
position: 491168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429032-429982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:430581-430634:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436613-436830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439570-439684:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:442511-442561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443631-443874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:483278-483639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485042-485133:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485546-485955:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:487604-487695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:490006-490158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:490953-491168:1:exon

DLGAP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DLGAP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 4 isoform X1
translation: MKGLGDNRSRHLSDNLDSPQDSLYAPQDRNPYLLSPTDSFTMDPRFPAQNTLHGDCLLPLNNQISNSSTFPRIHYNSHFEVPDENPFPSHAQATKINRLPANLLDQFEKQLPIHRDGFSTLQFQRSDAKHRSESPGRIRHLVHSVQKLFAKSQSLEGPTKGNVNGKKGADDPKQNRRSKSKDRAKTSEPKRRTRSNISGWWSSDDNLDSDTCSYRNPMGLMTLGRQPDHSQPKYFMHAYNTISEHMLKSSKSNNDLKVTPCTNIPINNDSNYIKRGSWSTLTLSHAREVCQKASATIDKALLKSKSCHQDLAYHYLQPDGGLWAQLGGVSPASSWAAPPLGWEDTGAAPLPPSEPPRRWDQPLSPGPTDAGSGQVPQGEWNNTLSRDKDSEIPCRRMRSGSYIKAMGDDDSEDSETSPKPSPKTAARRQSYLKATQQSLSEQSTTQRSLDRLDSVEILLPPKFPTWEEEYNQISDSVNESSCINQIFGPPSLIPQIFTHGEQAREPELGEQYEAVCDSTYSEAESAAAEVLDLPLPSYFRSRSHSYLRAIQAGCSQDEDTSSVRSISPPPAGSLSGSRTLPTNSSSCLVAYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDSQDHKSEVTSQSGLSNSSDSLDSTRTPSITRGSIVTPARDTPELPQKNATLKSDKGTLTSEEPKAENVPKRKLSSIGIQVDCLQPVVKEEPPPPVTKFQSIGVQVEDEWRNSHSRSMSSKQDTDSDTQEPNNSSCKSSERSVAECPQHNNSAGVDTSTRQPAKPSQIKRNLSYGDNTDPALEPSSLPPPDPWLETSSASPSEPTQPGACRRDGFWFLKLLQAETERLEGWCRQMDQETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFHGLCEQNLNPNANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLAETPERKEEKKPPPPVPKKPAKSKSQLNRDKASDSDKQRQEARKRLMAAKRAASVRQNSATESADSIEIYVPEAQTRL
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: join(429032..429982,431321..431491,436613..436830,439570..439684,442511..442561,443631..443874,483278..483639,485042..485133,485546..485955,487604..487695,490006..490158,490953..491168)
location: region:429032-491168:1
so has part: feature:429032-429982:1:exon
so has part: feature:431321-431491:1:exon
so has part: feature:436613-436830:1:exon
so has part: feature:439570-439684:1:exon
so has part: feature:442511-442561:1:exon
so has part: feature:443631-443874:1:exon
so has part: feature:483278-483639:1:exon
so has part: feature:485042-485133:1:exon
so has part: feature:485546-485955:1:exon
so has part: feature:487604-487695:1:exon
so has part: feature:490006-490158:1:exon
so has part: feature:490953-491168:1:exon

XP_010720517.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429032-429982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431321-431491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436613-436830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439570-439684:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:442511-442561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443631-443874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:483278-483639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485042-485133:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485546-485955:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:487604-487695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:490006-490158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:490953-491168:1:exon

DLGAP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DLGAP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 4 isoform X2
translation: MKGLGDNRSRHLSDNLDSPQDSLYAPQDRNPYLLSPTDSFTMDPRFPAQNTLHGDCLLPLNNQISNSSTFPRIHYNSHFEVPDENPFPSHAQATKINRLPANLLDQFEKQLPIHRDGFSTLQFQRSDAKHRSESPGRIRHLVHSVQKLFAKSQSLEGPTKGNVNGKKGADDPKQNRRSKSKDRAKTSEPKRRTRSNISGWWSSDDNLDSDTCSYRNPMGLMTLGRQPDHSQPKYFMHAYNTISEHMLKSSKSNNDLKVTPCTNIPINNDSNYIKRGSWSTLTLSHAREVCQKASATIDKALLKSKSCHQDLAYHYLQPDGGLWAQLGGVSPASSWAAPPLGWEDTGAAPLPPSEPPRRWDQPLSPGPTDAGSGQVPQGEWNNTLSRDKDSEIPCRRMRSGSYIKAMGDDDSEDSETSPKPSPKTAARRQSYLKATQQSLSEQSTTQRSLDRLDSVEILLPPKFPTWEEEYNQISDSVNESSCINQAREPELGEQYEAVCDSTYSEAESAAAEVLDLPLPSYFRSRSHSYLRAIQAGCSQDEDTSSVRSISPPPAGSLSGSRTLPTNSSSCLVAYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDSQDHKSEVTSQSGLSNSSDSLDSTRTPSITRGSIVTPARDTPELPQKNATLKSDKGTLTSEEPKAENVPKRKLSSIGIQVDCLQPVVKEEPPPPVTKFQSIGVQVEDEWRNSHSRSMSSKQDTDSDTQEPNNSSCKSSERSVAECPQHNNSAGVDTSTRQPAKPSQIKRNLSYGDNTDPALEPSSLPPPDPWLETSSASPSEPTQPGACRRDGFWFLKLLQAETERLEGWCRQMDQETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFHGLCEQNLNPNANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLAETPERKEEKKPPPPVPKKPAKSKSQLNRDKASDSDKQRQEARKRLMAAKRAASVRQNSATESADSIEIYVPEAQTRL
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: join(429032..429982,431321..431491,436613..436830,439570..439684,443631..443874,483278..483639,485042..485133,485546..485955,487604..487695,490006..490158,490953..491168)
location: region:429032-491168:1
so has part: feature:429032-429982:1:exon
so has part: feature:431321-431491:1:exon
so has part: feature:436613-436830:1:exon
so has part: feature:439570-439684:1:exon
so has part: feature:443631-443874:1:exon
so has part: feature:483278-483639:1:exon
so has part: feature:485042-485133:1:exon
so has part: feature:485546-485955:1:exon
so has part: feature:487604-487695:1:exon
so has part: feature:490006-490158:1:exon
so has part: feature:490953-491168:1:exon

XP_010720518.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429032-429982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431321-431491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436613-436830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439570-439684:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443631-443874:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483278-483639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485042-485133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485546-485955:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487604-487695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:490006-490158:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:490953-491168:1:exon

DLGAP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DLGAP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 4 isoform X4
translation: MKGLGDNRSRHLSDNLDSPQDSLYAPQDRNPYLLSPTDSFTMDPRFPAQNTLHGDCLLPLNNQISNSSTFPRIHYNSHFEVPDENPFPSHAQATKINRLPANLLDQFEKQLPIHRDGFSTLQFQRSDAKHRSESPGRIRHLVHSVQKLFAKSQSLEGPTKGNVNGKKGADDPKQNRRSKSKDRAKTSEPKRRTRSNISGWWSSDDNLDSDTCSYRNPMGLMTLGRQPDHSQPKYFMHAYNTISEHMLKSSKSNNDLKVTPCTNIPINNDSNYIKRGSWSTLTLSHAREVCQKASATIDKALLKSKSCHQDLAYHYLQVPQGEWNNTLSRDKDSEIPCRRMRSGSYIKAMGDDDSEDSETSPKPSPKTAARRQSYLKATQQSLSEQSTTQRSLDRLDSVEILLPPKFPTWEEEYNQISDSVNESSCINQIFGPPSLIPQIFTHGEQAREPELGEQYEAVCDSTYSEAESAAAEVLDLPLPSYFRSRSHSYLRAIQAGCSQDEDTSSVRSISPPPAGSLSGSRTLPTNSSSCLVAYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDSQDHKSEVTSQSGLSNSSDSLDSTRTPSITRGSIVTPARDTPELPQKNATLKSDKGTLTSEEPKAENVPKRKLSSIGIQVDCLQPVVKEEPPPPVTKFQSIGVQVEDEWRNSHSRSMSSKQDTDSDTQEPNNSSCKSSERSVAECPQHNNSAGVDTSTRQPAKPSQIKRNLSYGDNTDPALEPSSLPPPDPWLETSSASPSEPTQPGACRRDGFWFLKLLQAETERLEGWCRQMDQETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFHGLCEQNLNPNANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLAETPERKEEKKPPPPVPKKPAKSKSQLNRDKASDSDKQRQEARKRLMAAKRAASVRQNSATESADSIEIYVPEAQTRL
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: join(429032..429982,436613..436830,439570..439684,442511..442561,443631..443874,483278..483639,485042..485133,485546..485955,487604..487695,490006..490158,490953..491168)
location: region:429032-491168:1
so has part: feature:429032-429982:1:exon
so has part: feature:436613-436830:1:exon
so has part: feature:439570-439684:1:exon
so has part: feature:442511-442561:1:exon
so has part: feature:443631-443874:1:exon
so has part: feature:483278-483639:1:exon
so has part: feature:485042-485133:1:exon
so has part: feature:485546-485955:1:exon
so has part: feature:487604-487695:1:exon
so has part: feature:490006-490158:1:exon
so has part: feature:490953-491168:1:exon

XP_003211938.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:429032-429982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:436613-436830:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439570-439684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442511-442561:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:443631-443874:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483278-483639:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485042-485133:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485546-485955:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487604-487695:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:490006-490158:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:490953-491168:1:exon

DLGAP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DLGAP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 4 isoform X5
translation: MKGLGDNRSRHLSDNLDSPQDSLYAPQDRNPYLLSPTDSFTMDPRFPAQNTLHGDCLLPLNNQISNSSTFPRIHYNSHFEVPDENPFPSHAQATKINRLPANLLDQFEKQLPIHRDGFSTLQFQRSDAKHRSESPGRIRHLVHSVQKLFAKSQSLEGPTKGNVNGKKGADDPKQNRRSKSKDRAKTSEPKRRTRSNISGWWSSDDNLDSDTCSYRNPMGLMTLGRQPDHSQPKYFMHAYNTISEHMLKSSKSNNDLKVTPCTNIPINNDSNYIKRGSWSTLTLSHAREVCQKASATIDKALLKSKSCHQDLAYHYLQPDGGLWAQLGGVSPASSWAAPPLGWEDTGAAPLPPSEPPRRWDQPLSPGPTDAGSGQVPQGEWNNTLSRDKDSEIPCRRMRSGSYIKAMGDDDSEDSETSPKPSPKTAARRQSYLKATQQSLSEQSTTQRSLDRLDSVEILLPPKFPTWEEEYNQISDSVNESSCINQIFGPPSLIPQIFTHGEQAREPELGEQYEAVCDSTYSEAESAAAEVLDLPLPSYFRSRSHSYLRAIQAGCSQDEDTSSVRSISPPPAGSLSGSRTLPTNSSSCLVAYKKTPPPVPPRTTSKPFISVTVQSSTESAQDTYLDSQDHKSEVTSQSGLSNSSDSLDSTRTPSITRGSIVTPARDTPELPQKNATLKSDKGTLTSEEPKAENVPKRKLSSIGIQVDCLQPVVKEEPPPPVTKFQSIGVQVEDEWRNSHSRSMSSKQDTDSDTQEPNNSSCKSSERSVAECPQHNNSAGVDTSTRQPAKPSQIKRNLSYGDNTDPALEPSSLPPPDPWLETSSASPSEPTQPGACRRDGFWFLKLLQAETERLEGWCRQMDQETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFHGLCEQNLNPNANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLAETPERKSP
SIO_010081: DLGAP4
subclass of: SO_0000673
so part of: DLGAP4
location: join(429032..429982,431321..431491,436613..436830,439570..439684,442511..442561,443631..443874,483278..483639,485042..485133,485546..485955,487604..487695,490006..490158,490942..490950)
location: region:429032-490950:1
so has part: feature:429032-429982:1:exon
so has part: feature:431321-431491:1:exon
so has part: feature:436613-436830:1:exon
so has part: feature:439570-439684:1:exon
so has part: feature:442511-442561:1:exon
so has part: feature:443631-443874:1:exon
so has part: feature:483278-483639:1:exon
so has part: feature:485042-485133:1:exon
so has part: feature:485546-485955:1:exon
so has part: feature:487604-487695:1:exon
so has part: feature:490006-490158:1:exon
so has part: feature:490942-490950:1:exon

XP_031412373.1
type: Protein
SIO_000068: ncbiprotein

position:490950:1
position: 490950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:429032-429982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:431321-431491:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:436613-436830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439570-439684:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:442511-442561:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:443631-443874:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:483278-483639:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485042-485133:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:485546-485955:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:487604-487695:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:490006-490158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:490942-490950:1:exon

TGIF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TGIF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(498137..502924)
location: region:498137-502924:-1
so has part: feature:498137-502924:-1:exon
subclass of: SO_0000010

104913975
type: Gene
SIO_000068: ncbigene

position:498137:-1
position: 498137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502924:-1
position: 502924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498137-502924:-1:exon

TGIF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TGIF2
product: TGFB induced factor homeobox 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010722252.2
SIO_010081: TGIF2
subclass of: SO_0000673
so part of: TGIF2
location: complement(join(498137..499460,502688..502924))
location: region:498137-502924:-1
so has part: feature:502688-502924:-1:exon
so has part: feature:498137-499460:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502688-502924:-1:exon

position:502688:-1
position: 502688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:498137-499460:-1:exon

position:499460:-1
position: 499460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TGIF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TGIF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein TGIF2
translation: MRPPLTAVGLRAFKEPRSPVLAGRSQPAAGPSASALPQLLGLLVPGSGCPPAELQRRGCAVRSSTGVSGSTTCGCERGWHCAPFSSQICNWFINARRRLLPDMLRKDGKDPNQFTISRRGGKAGDVTLPRGAAAGSGVLVVPPMTAAGAAKVLPISVCPQVLCHPAQALGGNLTVLGARSPEREKQPGLQRVEPDPHPKALPGAAGSTVALLARAEAASPTSGLFNTPPPTPPELFGDDFSSFQLLVEVALQKAAELESQRQGGQLPLSPQTEPPGASVNK
SIO_010081: TGIF2
subclass of: SO_0000673
so part of: TGIF2
location: complement(join(498852..499460,502688..502924))
location: region:498852-502924:-1
so has part: feature:502688-502924:-1:exon
so has part: feature:498852-499460:-1:exon

XP_010720554.1
type: Protein
SIO_000068: ncbiprotein

position:498852:-1
position: 498852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502688-502924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:498852-499460:-1:exon

MYL9
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MYL9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(503053..509258)
location: region:503053-509258:-1
so has part: feature:503053-509258:-1:exon
subclass of: SO_0000010

100549745
type: Gene
SIO_000068: ncbigene

position:503053:-1
position: 503053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509258:-1
position: 509258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503053-509258:-1:exon

MYL9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MYL9
product: myosin light chain 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 56 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010722218.3
SIO_010081: MYL9
subclass of: SO_0000673
so part of: MYL9
location: complement(join(503053..503867,503989..504150,505519..505722,509111..509258))
location: region:503053-509258:-1
so has part: feature:509111-509258:-1:exon
so has part: feature:505519-505722:-1:exon
so has part: feature:503989-504150:-1:exon
so has part: feature:503053-503867:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509111-509258:-1:exon

position:509111:-1
position: 509111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505519-505722:-1:exon

position:505519:-1
position: 505519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505722:-1
position: 505722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:503989-504150:-1:exon

position:503989:-1
position: 503989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504150:-1
position: 504150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:503053-503867:-1:exon

position:503867:-1
position: 503867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYL9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MYL9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin regulatory light polypeptide 9
translation: MSSKRAKAKTTKKRPQRATSNVFAMFDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHGAKDKDD
SIO_010081: MYL9
subclass of: SO_0000673
so part of: MYL9
location: complement(join(503695..503867,503989..504150,505519..505702))
location: region:503695-505702:-1
so has part: feature:505519-505702:-1:exon
so has part: feature:503989-504150:-1:exon
so has part: feature:503695-503867:-1:exon

XP_010720520.1
type: Protein
SIO_000068: ncbiprotein

position:503695:-1
position: 503695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505702:-1
position: 505702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505519-505702:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503989-504150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503695-503867:-1:exon

RAB5IF
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RAB5IF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <511902..515677
location: region:511902-515677:1
so has part: feature:511902-515677:1:exon
subclass of: SO_0000010

100541631
type: Gene
SIO_000068: ncbigene

position:511902:1
position: 511902
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:515677:1
position: 515677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511902-515677:1:exon

RAB5IF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RAB5IF
product: RAB5 interacting factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_019622121.1
SIO_010081: RAB5IF
subclass of: SO_0000673
so part of: RAB5IF
location: join(<511902..512044,513364..513493,513929..515677)
location: region:511902-515677:1
so has part: feature:511902-512044:1:exon
so has part: feature:513364-513493:1:exon
so has part: feature:513929-515677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:511902-512044:1:exon

position:512044:1
position: 512044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:513364-513493:1:exon

position:513364:1
position: 513364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513493:1
position: 513493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:513929-515677:1:exon

position:513929:1
position: 513929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB5IF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RAB5IF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein RAB5IF
translation: RRKQKPCFAFSPQDEFLDVIYWFRQIIAVILGVIWGVVPLKGFVGIAIFCLINAGVLYLYFSSFQQIDEEEYGGTWELTKEGFMTSFALFLVVWIIFYTAIHYD
SIO_010081: RAB5IF
subclass of: SO_0000673
so part of: RAB5IF
location: join(<511902..512044,513364..513493,513929..513970)
location: region:511902-513970:1
so has part: feature:511902-512044:1:exon
so has part: feature:513364-513493:1:exon
so has part: feature:513929-513970:1:exon

XP_019477666.1
type: Protein
SIO_000068: ncbiprotein

position:513970:1
position: 513970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511902-512044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:513364-513493:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:513929-513970:1:exon

GGT7
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GGT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 516388..535962
location: region:516388-535962:1
so has part: feature:516388-535962:1:exon
subclass of: SO_0000010

104913977
type: Gene
SIO_000068: ncbigene

position:516388:1
position: 516388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535962:1
position: 535962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516388-535962:1:exon

GGT7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GGT7
product: gamma-glutamyltransferase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019622072.1
SIO_010081: GGT7
subclass of: SO_0000673
so part of: GGT7
location: join(516388..516404,516559..516751,518948..519250,519968..520119,520714..520828,521332..521399,521983..522056,522456..522649,524618..524705,524862..524989,526331..526419,527107..527259,527949..528066,528759..528896,529597..529696,533410..535962)
location: region:516388-535962:1
so has part: feature:516388-516404:1:exon
so has part: feature:516559-516751:1:exon
so has part: feature:518948-519250:1:exon
so has part: feature:519968-520119:1:exon
so has part: feature:520714-520828:1:exon
so has part: feature:521332-521399:1:exon
so has part: feature:521983-522056:1:exon
so has part: feature:522456-522649:1:exon
so has part: feature:524618-524705:1:exon
so has part: feature:524862-524989:1:exon
so has part: feature:526331-526419:1:exon
so has part: feature:527107-527259:1:exon
so has part: feature:527949-528066:1:exon
so has part: feature:528759-528896:1:exon
so has part: feature:529597-529696:1:exon
so has part: feature:533410-535962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516388-516404:1:exon

position:516404:1
position: 516404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516559-516751:1:exon

position:516559:1
position: 516559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516751:1
position: 516751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:518948-519250:1:exon

position:518948:1
position: 518948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519250:1
position: 519250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:519968-520119:1:exon

position:519968:1
position: 519968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520119:1
position: 520119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:520714-520828:1:exon

position:520714:1
position: 520714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520828:1
position: 520828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:521332-521399:1:exon

position:521332:1
position: 521332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521399:1
position: 521399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:521983-522056:1:exon

position:521983:1
position: 521983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522056:1
position: 522056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:522456-522649:1:exon

position:522456:1
position: 522456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522649:1
position: 522649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:524618-524705:1:exon

position:524618:1
position: 524618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524705:1
position: 524705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:524862-524989:1:exon

position:524862:1
position: 524862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524989:1
position: 524989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:526331-526419:1:exon

position:526331:1
position: 526331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526419:1
position: 526419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:527107-527259:1:exon

position:527107:1
position: 527107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527259:1
position: 527259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:527949-528066:1:exon

position:527949:1
position: 527949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528066:1
position: 528066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:528759-528896:1:exon

position:528759:1
position: 528759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528896:1
position: 528896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:529597-529696:1:exon

position:529597:1
position: 529597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529696:1
position: 529696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:533410-535962:1:exon

position:533410:1
position: 533410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GGT7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GGT7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutathione hydrolase 7
translation: MTNVYSPVSQLARAVLAARWDSSADALTRCRRQGTDPLLRAEGRKDSKTARAEAGSQTRSRERPVTGYQPCQVNYATGAPCCSITNSYCLLAAHKDPDSFLKSARLQRLPSSSSEMGSQDASPLRETSKDPFSGDCSCQQDGLTVIITACLTFATGVTVALIMQIYFGDPQLFQRGAVVTDAARCTALGVEVLSKQGSSVDAAIASVLCAGVVNPHTSGIGGGGVMLVHDIRKNQSQVIDFREVAPLGIPQDGDLLKDTKPGLLVGVPGTLQGMHQAHQLHGRLPWSQLLGLVAAVAQDGFNITHDLAKAVSELKDLNYSDKFRETFLPDGQPLLPGMFVRRLDLAAVLEQVGAEGTSAFYSGNLSQEIISEVQNNGGVLEEEDFSNYSVTVENPVHTIYQGHLVLSPPPPHAGPALITALNILEGFNITNLASRGNILHWIAETLKIALSLASNLGDPSNDASIVHAAEGMLSKSEADSLRQLINESQPFSSDLRLPHFSVESGPAASQVLVMGPDDFIVAVVSSLNRPFGSGIMTPSGVLLNSQMLDFSWQNKTMNHSIPRPQNLIQPRKRPLSFLLPTIVRPSEGMCGTYLSLGANSGDKALSGIVQVLVNVLAFNKNLSESLSLGRLHPQLQSNTLQVDSEFPEEDIECLVARGHEVDKVKVLSLVHGARRTNSFIIGLKDPRSMDAAGATIL
SIO_010081: GGT7
subclass of: SO_0000673
so part of: GGT7
location: join(516388..516404,516559..516751,518948..519250,519968..520119,520714..520828,521332..521399,521983..522056,522456..522649,524618..524705,524862..524989,526331..526419,527107..527259,527949..528066,528759..528896,529597..529696,533410..533573)
location: region:516388-533573:1
so has part: feature:516388-516404:1:exon
so has part: feature:516559-516751:1:exon
so has part: feature:518948-519250:1:exon
so has part: feature:519968-520119:1:exon
so has part: feature:520714-520828:1:exon
so has part: feature:521332-521399:1:exon
so has part: feature:521983-522056:1:exon
so has part: feature:522456-522649:1:exon
so has part: feature:524618-524705:1:exon
so has part: feature:524862-524989:1:exon
so has part: feature:526331-526419:1:exon
so has part: feature:527107-527259:1:exon
so has part: feature:527949-528066:1:exon
so has part: feature:528759-528896:1:exon
so has part: feature:529597-529696:1:exon
so has part: feature:533410-533573:1:exon

XP_019477617.1
type: Protein
SIO_000068: ncbiprotein

position:533573:1
position: 533573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516388-516404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516559-516751:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518948-519250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519968-520119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:520714-520828:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:521332-521399:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:521983-522056:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:522456-522649:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:524618-524705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:524862-524989:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:526331-526419:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:527107-527259:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:527949-528066:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:528759-528896:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:529597-529696:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:533410-533573:1:exon

NCOA6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NCOA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 541508..581098
location: region:541508-581098:1
so has part: feature:541508-581098:1:exon
subclass of: SO_0000010

100538397
type: Gene
SIO_000068: ncbigene

position:541508:1
position: 541508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581098:1
position: 581098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541508-581098:1:exon

NCOA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NCOA6
product: nuclear receptor coactivator 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_019622122.2
SIO_010081: NCOA6
subclass of: SO_0000673
so part of: NCOA6
location: join(541508..544581,548652..548808,548890..549164,551969..552124,552708..552830,554096..554224,555201..556016,558794..558940,559887..561006,564515..564636,565475..568453,572972..573040,574994..575030,577662..577810,580502..581098)
location: region:541508-581098:1
so has part: feature:541508-544581:1:exon
so has part: feature:548652-548808:1:exon
so has part: feature:548890-549164:1:exon
so has part: feature:551969-552124:1:exon
so has part: feature:552708-552830:1:exon
so has part: feature:554096-554224:1:exon
so has part: feature:555201-556016:1:exon
so has part: feature:558794-558940:1:exon
so has part: feature:559887-561006:1:exon
so has part: feature:564515-564636:1:exon
so has part: feature:565475-568453:1:exon
so has part: feature:572972-573040:1:exon
so has part: feature:574994-575030:1:exon
so has part: feature:577662-577810:1:exon
so has part: feature:580502-581098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541508-544581:1:exon

position:544581:1
position: 544581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548652-548808:1:exon

position:548652:1
position: 548652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548808:1
position: 548808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548890-549164:1:exon

position:548890:1
position: 548890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549164:1
position: 549164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:551969-552124:1:exon

position:551969:1
position: 551969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552124:1
position: 552124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552708-552830:1:exon

position:552708:1
position: 552708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552830:1
position: 552830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:554096-554224:1:exon

position:554096:1
position: 554096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554224:1
position: 554224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:555201-556016:1:exon

position:555201:1
position: 555201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556016:1
position: 556016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:558794-558940:1:exon

position:558794:1
position: 558794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558940:1
position: 558940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:559887-561006:1:exon

position:559887:1
position: 559887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561006:1
position: 561006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:564515-564636:1:exon

position:564515:1
position: 564515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564636:1
position: 564636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:565475-568453:1:exon

position:565475:1
position: 565475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568453:1
position: 568453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:572972-573040:1:exon

position:572972:1
position: 572972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:573040:1
position: 573040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:574994-575030:1:exon

position:574994:1
position: 574994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:575030:1
position: 575030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:577662-577810:1:exon

position:577662:1
position: 577662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577810:1
position: 577810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:580502-581098:1:exon

position:580502:1
position: 580502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCOA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NCOA6
product: nuclear receptor coactivator 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010722220.3
SIO_010081: NCOA6
subclass of: SO_0000673
so part of: NCOA6
location: join(547754..547909,548652..548808,548890..549164,551969..552124,552708..552830,554096..554224,555201..556016,558794..558940,559887..561006,564515..564636,565475..568453,572972..573040,574994..575030,577333..577655)
location: region:547754-577655:1
so has part: feature:547754-547909:1:exon
so has part: feature:548652-548808:1:exon
so has part: feature:548890-549164:1:exon
so has part: feature:551969-552124:1:exon
so has part: feature:552708-552830:1:exon
so has part: feature:554096-554224:1:exon
so has part: feature:555201-556016:1:exon
so has part: feature:558794-558940:1:exon
so has part: feature:559887-561006:1:exon
so has part: feature:564515-564636:1:exon
so has part: feature:565475-568453:1:exon
so has part: feature:572972-573040:1:exon
so has part: feature:574994-575030:1:exon
so has part: feature:577333-577655:1:exon

position:547754:1
position: 547754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577655:1
position: 577655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547754-547909:1:exon

position:547909:1
position: 547909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548652-548808:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548890-549164:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551969-552124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552708-552830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554096-554224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555201-556016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558794-558940:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559887-561006:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:564515-564636:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:565475-568453:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:572972-573040:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:574994-575030:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577333-577655:1:exon

position:577333:1
position: 577333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NCOA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NCOA6
product: nuclear receptor coactivator 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_010722219.3
SIO_010081: NCOA6
subclass of: SO_0000673
so part of: NCOA6
location: join(547756..547909,548652..548808,548890..549164,551969..552124,552708..552830,554096..554224,555201..556016,558794..558940,559887..561006,564515..564636,565475..568453,572972..573040,574994..575030,577662..577810,580502..581098)
location: region:547756-581098:1
so has part: feature:547756-547909:1:exon
so has part: feature:548652-548808:1:exon
so has part: feature:548890-549164:1:exon
so has part: feature:551969-552124:1:exon
so has part: feature:552708-552830:1:exon
so has part: feature:554096-554224:1:exon
so has part: feature:555201-556016:1:exon
so has part: feature:558794-558940:1:exon
so has part: feature:559887-561006:1:exon
so has part: feature:564515-564636:1:exon
so has part: feature:565475-568453:1:exon
so has part: feature:572972-573040:1:exon
so has part: feature:574994-575030:1:exon
so has part: feature:577662-577810:1:exon
so has part: feature:580502-581098:1:exon

position:547756:1
position: 547756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547756-547909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548652-548808:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:548890-549164:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:551969-552124:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552708-552830:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:554096-554224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555201-556016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558794-558940:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559887-561006:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:564515-564636:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:565475-568453:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:572972-573040:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:574994-575030:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577662-577810:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:580502-581098:1:exon

NCOA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NCOA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 6 isoform X1
translation: MVLDDLPKLGDTCASLYSSAMEDLEVDLDSGLEEDELKQEAAPEDSTIFVAFKGDIGDRDFEQKLSVILENVPGLLHMESNKLKLQKIEPWNSVRVTFNIPREAAERLRILAQNNNQQLRDLGILSVQIEGEGAINLALAQSRSQDVRINGPLGANNSVRMEPGFPMQGGQGLIRMSNAAAVMMSQSGSMPSSMVAGGAGTELQPRTPRPSSQPDAMDPLLSGLNIQQQNHPSGSLAPQLHSMQSVPVNRQMNSANFQQLQQQTQLQTRPPQPHQQPQQGIRPSFTSPAQVPVPPGWNQLPSGALQPPPTQGALGTLTVNQGWKKAPLPGQMQQQLQARPSLATVQTPTHPPPPYPFGSQQASQAHSNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQSSTLPQGFQQTVSSPSRNAMVQQGNVPPNFMVMQQQNQGPQGLHPGLGGMPKRLPPGFPAGQANQSFMQGQVPSTAPGTPVNSGAPQLQTSQNMQHTGGQGSGPPQNQMQAPHGPPNIMQTNLMGLHGNMNNQQAGASGVPQVNMGNIQGQPQQGPQSQLMGMHQQIVSSQGQMVNIQAQGSMNPQNQMILSRTQLMPQGQMMVTPQNQNLGPSPQRMTPPKQMISQQGQQMMSTHNQMMGPQGQVLLQPNSMMEQMMTTQMQGNKQPFNAQNQSSVMSGPAQLMRGPTPNMQGNMVQFTGQMMAQQGPVNGNPSQVMGIQGQVLRPTGPGPHMSQQLGDTTTATNNDVNVTQMLPDVPVQQSNMVPSHLQAMQGNNSASGSHFPGHGLPFNSGFSGTPNGNQISCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNKPNSQNASKPKKKKPPRKKKTNQQLEQTNSSEPRPGGLEESDQSSTSGDQGINLDSSGPKLSDFGSRPPGYPSQPVEQRPLQQMPPQLMPHTQQPQQLQQQPQLPPQQAQAPPQTPQQQQQMMMMLMMQQDSKSVRLPLPQGVHPPRGPLNPDAQRMPMQQSGNMPVMVNLQGPGSVPLSPDKQRISLPSNPSLGNNARKMVYQDNVQNPSSSPLGEVSSVSSLPDGGGTEGPAASGAQNNLTSHLVVSQNQLMMTGAKPGPSPLSTTQGTSPQQQSNSLPGSLAHHFPNVATPSQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPLPPRPNLSRGFDQQGLNPTTLKAIGQAPSNLTINNQSSFAAPQSHKLESVVNSGKQTNAGGTKRASPSSSRRSSPGSSRKTTPSPGRQNSKAAKLSLATPQNPSLLQNVDMQRNMMVGPASLPTPVTTSFQNNNMLSNQSPAVSAPAMTGIPEDNKESLSVPQDNECQSAQIVQGNKDQPSIELKGIPTPEIKMLVPEEQSKKDGQALEVGKLPVLEESKTMVSPAMREAPTSLSQLLDNSGAPNVTIKPPGLTGLEMAPVVTTVEEIKKVAVIPPLQDASSSKEPSNSHSLPQSNEPCSNPGHQEPGEINSNVTQSVPPVMQRPVSSSISAPLPPNQITVFVTSNPITSSANTSAPLPSHLQPTLVSTVVTMPNVGNKVMVSEGQSAVQSNARPQFITPVFINSSSIIQVMKGSQPSTIPTAPMTSNSSLMPQSVAVVGPLHIPQNIKFSSAPAPPSTSSSSPAPSIPTSRPLVLNPLAPPVQLPSPATTSSNVPSHLPAQPAKDSSPEEAASQSSGSSDQCPATATQPGPVVSPLLSSSPGPGNRRSPVSSSKGKGKVDKIGQLLLTKACKKVTGSLEKGEEQYTLDGEAEGQGLETSVPSNLGTEQSPAELDNKTVTPPVPSLTKQSTSGPGNVSVSAAAASASVSPSLSTSTPPTSALSSVTTPAIPELAPATPSTNGSNHGSLPAEQTGGGLVEDKTGTHQELLQNTASSQHLTQKKSSVATTESTVQRTELETNAPVVAGQSNETKENCEKSKTPSRRNSRTED…
SIO_010081: NCOA6
subclass of: SO_0000673
so part of: NCOA6
location: join(548930..549164,551969..552124,552708..552830,554096..554224,555201..556016,558794..558940,559887..561006,564515..564636,565475..568453,572972..573040,574994..575030,577662..577810,580502..580548)
location: region:548930-580548:1
so has part: feature:548930-549164:1:exon
so has part: feature:551969-552124:1:exon
so has part: feature:552708-552830:1:exon
so has part: feature:554096-554224:1:exon
so has part: feature:555201-556016:1:exon
so has part: feature:558794-558940:1:exon
so has part: feature:559887-561006:1:exon
so has part: feature:564515-564636:1:exon
so has part: feature:565475-568453:1:exon
so has part: feature:572972-573040:1:exon
so has part: feature:574994-575030:1:exon
so has part: feature:577662-577810:1:exon
so has part: feature:580502-580548:1:exon

XP_019477667.1
type: Protein
SIO_000068: ncbiprotein

position:548930:1
position: 548930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580548:1
position: 580548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548930-549164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551969-552124:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552708-552830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554096-554224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555201-556016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558794-558940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559887-561006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564515-564636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:565475-568453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572972-573040:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574994-575030:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:577662-577810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:580502-580548:1:exon

NCOA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NCOA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 6 isoform X1
translation: MVLDDLPKLGDTCASLYSSAMEDLEVDLDSGLEEDELKQEAAPEDSTIFVAFKGDIGDRDFEQKLSVILENVPGLLHMESNKLKLQKIEPWNSVRVTFNIPREAAERLRILAQNNNQQLRDLGILSVQIEGEGAINLALAQSRSQDVRINGPLGANNSVRMEPGFPMQGGQGLIRMSNAAAVMMSQSGSMPSSMVAGGAGTELQPRTPRPSSQPDAMDPLLSGLNIQQQNHPSGSLAPQLHSMQSVPVNRQMNSANFQQLQQQTQLQTRPPQPHQQPQQGIRPSFTSPAQVPVPPGWNQLPSGALQPPPTQGALGTLTVNQGWKKAPLPGQMQQQLQARPSLATVQTPTHPPPPYPFGSQQASQAHSNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQSSTLPQGFQQTVSSPSRNAMVQQGNVPPNFMVMQQQNQGPQGLHPGLGGMPKRLPPGFPAGQANQSFMQGQVPSTAPGTPVNSGAPQLQTSQNMQHTGGQGSGPPQNQMQAPHGPPNIMQTNLMGLHGNMNNQQAGASGVPQVNMGNIQGQPQQGPQSQLMGMHQQIVSSQGQMVNIQAQGSMNPQNQMILSRTQLMPQGQMMVTPQNQNLGPSPQRMTPPKQMISQQGQQMMSTHNQMMGPQGQVLLQPNSMMEQMMTTQMQGNKQPFNAQNQSSVMSGPAQLMRGPTPNMQGNMVQFTGQMMAQQGPVNGNPSQVMGIQGQVLRPTGPGPHMSQQLGDTTTATNNDVNVTQMLPDVPVQQSNMVPSHLQAMQGNNSASGSHFPGHGLPFNSGFSGTPNGNQISCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNKPNSQNASKPKKKKPPRKKKTNQQLEQTNSSEPRPGGLEESDQSSTSGDQGINLDSSGPKLSDFGSRPPGYPSQPVEQRPLQQMPPQLMPHTQQPQQLQQQPQLPPQQAQAPPQTPQQQQQMMMMLMMQQDSKSVRLPLPQGVHPPRGPLNPDAQRMPMQQSGNMPVMVNLQGPGSVPLSPDKQRISLPSNPSLGNNARKMVYQDNVQNPSSSPLGEVSSVSSLPDGGGTEGPAASGAQNNLTSHLVVSQNQLMMTGAKPGPSPLSTTQGTSPQQQSNSLPGSLAHHFPNVATPSQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPLPPRPNLSRGFDQQGLNPTTLKAIGQAPSNLTINNQSSFAAPQSHKLESVVNSGKQTNAGGTKRASPSSSRRSSPGSSRKTTPSPGRQNSKAAKLSLATPQNPSLLQNVDMQRNMMVGPASLPTPVTTSFQNNNMLSNQSPAVSAPAMTGIPEDNKESLSVPQDNECQSAQIVQGNKDQPSIELKGIPTPEIKMLVPEEQSKKDGQALEVGKLPVLEESKTMVSPAMREAPTSLSQLLDNSGAPNVTIKPPGLTGLEMAPVVTTVEEIKKVAVIPPLQDASSSKEPSNSHSLPQSNEPCSNPGHQEPGEINSNVTQSVPPVMQRPVSSSISAPLPPNQITVFVTSNPITSSANTSAPLPSHLQPTLVSTVVTMPNVGNKVMVSEGQSAVQSNARPQFITPVFINSSSIIQVMKGSQPSTIPTAPMTSNSSLMPQSVAVVGPLHIPQNIKFSSAPAPPSTSSSSPAPSIPTSRPLVLNPLAPPVQLPSPATTSSNVPSHLPAQPAKDSSPEEAASQSSGSSDQCPATATQPGPVVSPLLSSSPGPGNRRSPVSSSKGKGKVDKIGQLLLTKACKKVTGSLEKGEEQYTLDGEAEGQGLETSVPSNLGTEQSPAELDNKTVTPPVPSLTKQSTSGPGNVSVSAAAASASVSPSLSTSTPPTSALSSVTTPAIPELAPATPSTNGSNHGSLPAEQTGGGLVEDKTGTHQELLQNTASSQHLTQKKSSVATTESTVQRTELETNAPVVAGQSNETKENCEKSKTPSRRNSRTED…
SIO_010081: NCOA6
subclass of: SO_0000673
so part of: NCOA6
location: join(548930..549164,551969..552124,552708..552830,554096..554224,555201..556016,558794..558940,559887..561006,564515..564636,565475..568453,572972..573040,574994..575030,577662..577810,580502..580548)
location: region:548930-580548:1
so has part: feature:548930-549164:1:exon
so has part: feature:551969-552124:1:exon
so has part: feature:552708-552830:1:exon
so has part: feature:554096-554224:1:exon
so has part: feature:555201-556016:1:exon
so has part: feature:558794-558940:1:exon
so has part: feature:559887-561006:1:exon
so has part: feature:564515-564636:1:exon
so has part: feature:565475-568453:1:exon
so has part: feature:572972-573040:1:exon
so has part: feature:574994-575030:1:exon
so has part: feature:577662-577810:1:exon
so has part: feature:580502-580548:1:exon

XP_010720521.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548930-549164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551969-552124:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552708-552830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554096-554224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555201-556016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558794-558940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559887-561006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564515-564636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:565475-568453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572972-573040:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574994-575030:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:577662-577810:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:580502-580548:1:exon

NCOA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NCOA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor coactivator 6 isoform X2
translation: MVLDDLPKLGDTCASLYSSAMEDLEVDLDSGLEEDELKQEAAPEDSTIFVAFKGDIGDRDFEQKLSVILENVPGLLHMESNKLKLQKIEPWNSVRVTFNIPREAAERLRILAQNNNQQLRDLGILSVQIEGEGAINLALAQSRSQDVRINGPLGANNSVRMEPGFPMQGGQGLIRMSNAAAVMMSQSGSMPSSMVAGGAGTELQPRTPRPSSQPDAMDPLLSGLNIQQQNHPSGSLAPQLHSMQSVPVNRQMNSANFQQLQQQTQLQTRPPQPHQQPQQGIRPSFTSPAQVPVPPGWNQLPSGALQPPPTQGALGTLTVNQGWKKAPLPGQMQQQLQARPSLATVQTPTHPPPPYPFGSQQASQAHSNFPQMSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQQQMGPRPPQSSTLPQGFQQTVSSPSRNAMVQQGNVPPNFMVMQQQNQGPQGLHPGLGGMPKRLPPGFPAGQANQSFMQGQVPSTAPGTPVNSGAPQLQTSQNMQHTGGQGSGPPQNQMQAPHGPPNIMQTNLMGLHGNMNNQQAGASGVPQVNMGNIQGQPQQGPQSQLMGMHQQIVSSQGQMVNIQAQGSMNPQNQMILSRTQLMPQGQMMVTPQNQNLGPSPQRMTPPKQMISQQGQQMMSTHNQMMGPQGQVLLQPNSMMEQMMTTQMQGNKQPFNAQNQSSVMSGPAQLMRGPTPNMQGNMVQFTGQMMAQQGPVNGNPSQVMGIQGQVLRPTGPGPHMSQQLGDTTTATNNDVNVTQMLPDVPVQQSNMVPSHLQAMQGNNSASGSHFPGHGLPFNSGFSGTPNGNQISCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNKPNSQNASKPKKKKPPRKKKTNQQLEQTNSSEPRPGGLEESDQSSTSGDQGINLDSSGPKLSDFGSRPPGYPSQPVEQRPLQQMPPQLMPHTQQPQQLQQQPQLPPQQAQAPPQTPQQQQQMMMMLMMQQDSKSVRLPLPQGVHPPRGPLNPDAQRMPMQQSGNMPVMVNLQGPGSVPLSPDKQRISLPSNPSLGNNARKMVYQDNVQNPSSSPLGEVSSVSSLPDGGGTEGPAASGAQNNLTSHLVVSQNQLMMTGAKPGPSPLSTTQGTSPQQQSNSLPGSLAHHFPNVATPSQTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPLPPRPNLSRGFDQQGLNPTTLKAIGQAPSNLTINNQSSFAAPQSHKLESVVNSGKQTNAGGTKRASPSSSRRSSPGSSRKTTPSPGRQNSKAAKLSLATPQNPSLLQNVDMQRNMMVGPASLPTPVTTSFQNNNMLSNQSPAVSAPAMTGIPEDNKESLSVPQDNECQSAQIVQGNKDQPSIELKGIPTPEIKMLVPEEQSKKDGQALEVGKLPVLEESKTMVSPAMREAPTSLSQLLDNSGAPNVTIKPPGLTGLEMAPVVTTVEEIKKVAVIPPLQDASSSKEPSNSHSLPQSNEPCSNPGHQEPGEINSNVTQSVPPVMQRPVSSSISAPLPPNQITVFVTSNPITSSANTSAPLPSHLQPTLVSTVVTMPNVGNKVMVSEGQSAVQSNARPQFITPVFINSSSIIQVMKGSQPSTIPTAPMTSNSSLMPQSVAVVGPLHIPQNIKFSSAPAPPSTSSSSPAPSIPTSRPLVLNPLAPPVQLPSPATTSSNVPSHLPAQPAKDSSPEEAASQSSGSSDQCPATATQPGPVVSPLLSSSPGPGNRRSPVSSSKGKGKVDKIGQLLLTKACKKVTGSLEKGEEQYTLDGEAEGQGLETSVPSNLGTEQSPAELDNKTVTPPVPSLTKQSTSGPGNVSVSAAAASASVSPSLSTSTPPTSALSSVTTPAIPELAPATPSTNGSNHGSLPAEQTGGGLVEDKTGTHQELLQNTASSQHLTQKKSSVATTESTVQRTELETNAPVVAGQRLQ
SIO_010081: NCOA6
subclass of: SO_0000673
so part of: NCOA6
location: join(548930..549164,551969..552124,552708..552830,554096..554224,555201..556016,558794..558940,559887..561006,564515..564636,565475..568453,572972..573040,574994..575030,577333..577342)
location: region:548930-577342:1
so has part: feature:548930-549164:1:exon
so has part: feature:551969-552124:1:exon
so has part: feature:552708-552830:1:exon
so has part: feature:554096-554224:1:exon
so has part: feature:555201-556016:1:exon
so has part: feature:558794-558940:1:exon
so has part: feature:559887-561006:1:exon
so has part: feature:564515-564636:1:exon
so has part: feature:565475-568453:1:exon
so has part: feature:572972-573040:1:exon
so has part: feature:574994-575030:1:exon
so has part: feature:577333-577342:1:exon

XP_010720522.1
type: Protein
SIO_000068: ncbiprotein

position:577342:1
position: 577342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548930-549164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551969-552124:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552708-552830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554096-554224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555201-556016:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:558794-558940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559887-561006:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:564515-564636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:565475-568453:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572972-573040:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574994-575030:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:577333-577342:1:exon

TP53INP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TP53INP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(583382..604865)
location: region:583382-604865:-1
so has part: feature:583382-604865:-1:exon
subclass of: SO_0000010

104913978
type: Gene
SIO_000068: ncbigene

position:583382:-1
position: 583382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604865:-1
position: 604865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583382-604865:-1:exon

TP53INP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TP53INP2
product: tumor protein p53 inducible nuclear protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010722255.3
SIO_010081: TP53INP2
subclass of: SO_0000673
so part of: TP53INP2
location: complement(join(583382..583807,589197..589365,590949..591078,593858..594185,604757..604865))
location: region:583382-604865:-1
so has part: feature:604757-604865:-1:exon
so has part: feature:593858-594185:-1:exon
so has part: feature:590949-591078:-1:exon
so has part: feature:589197-589365:-1:exon
so has part: feature:583382-583807:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604757-604865:-1:exon

position:604757:-1
position: 604757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:593858-594185:-1:exon

position:593858:-1
position: 593858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594185:-1
position: 594185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:590949-591078:-1:exon

position:590949:-1
position: 590949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591078:-1
position: 591078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:589197-589365:-1:exon

position:589197:-1
position: 589197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589365:-1
position: 589365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:583382-583807:-1:exon

position:583807:-1
position: 583807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TP53INP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TP53INP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible nuclear protein 2
translation: MFQRFTSLFFSDSSTAEGLEEPKPFVSEEEEEDGWLIIELGEEPGPDGVGSSPMEDLLIEHPSMSVYVTSTLELDAEVPQDDAAGEVPEPQLERHVPHRSTSLSVKAAVLEKVSQARRVQRAKQLAEKPWLSQKALQRQDRALGPAEKPHRRNAPKAPFQLLNLNLRGSPEALSPSTAPHRSVREAEQRALPQDGAPRPALPFTRSSKEKALPGLSRTPYAFARMLSGLGRGGATLCSNAHGHVLPQGDPVLPNALHRWDDTDAVIWEMRKKSPTFSTSPVL
SIO_010081: TP53INP2
subclass of: SO_0000673
so part of: TP53INP2
location: complement(join(583382..583807,589197..589365,590949..591078,593858..593981))
location: region:583382-593981:-1
so has part: feature:593858-593981:-1:exon
so has part: feature:590949-591078:-1:exon
so has part: feature:589197-589365:-1:exon
so has part: feature:583382-583807:-1:exon

XP_010720557.1
type: Protein
SIO_000068: ncbiprotein

position:593981:-1
position: 593981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593858-593981:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590949-591078:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589197-589365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583382-583807:-1:exon

LOC109370724
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 604367..607886
location: region:604367-607886:1
so has part: feature:604367-607886:1:exon
subclass of: SO_0000010

109370724
type: Gene
SIO_000068: ncbigene

position:604367:1
position: 604367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607886:1
position: 607886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604367-607886:1:exon

LOC109370724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109370724
product: uncharacterized LOC109370724
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019622124.2
SIO_010081: LOC109370724
subclass of: SO_0000673
so part of: LOC109370724
location: join(604367..604613,604779..605137,607568..607886)
location: region:604367-607886:1
so has part: feature:604367-604613:1:exon
so has part: feature:604779-605137:1:exon
so has part: feature:607568-607886:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:604367-604613:1:exon

position:604613:1
position: 604613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:604779-605137:1:exon

position:604779:1
position: 604779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605137:1
position: 605137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:607568-607886:1:exon

position:607568:1
position: 607568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109370724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109370724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109370724
translation: MGQTGTDFKGSRSTGQNGHGEVTLPASQSVGAAPGSNAVRGVTQQEGWPSHGDRELCLTVPLPWECSNLHPGSSITLSPRKEPGAGWPQERELKSSARRTPITCSLLPRRNAVLPAPLAQAGGTPAAACVPREQRNGADGGNGALRVTNYPKEQQSAPGSVRLRARTSHSKIFPSGSSATHCSLSKQFWPEEQLCLERIEP
SIO_010081: LOC109370724
subclass of: SO_0000673
so part of: LOC109370724
location: join(604470..604613,604779..605137,607568..607670)
location: region:604470-607670:1
so has part: feature:604470-604613:1:exon
so has part: feature:604779-605137:1:exon
so has part: feature:607568-607670:1:exon

XP_019477669.1
type: Protein
SIO_000068: ncbiprotein

position:604470:1
position: 604470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607670:1
position: 607670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:604470-604613:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:604779-605137:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:607568-607670:1:exon

PIGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PIGU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 621611..640832
location: region:621611-640832:1
so has part: feature:621611-640832:1:exon
subclass of: SO_0000010

100538551
type: Gene
SIO_000068: ncbigene

position:621611:1
position: 621611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640832:1
position: 640832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621611-640832:1:exon

PIGU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PIGU
product: phosphatidylinositol glycan anchor biosynthesis class U
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010722221.3
SIO_010081: PIGU
subclass of: SO_0000673
so part of: PIGU
location: join(621611..621701,622082..622146,623386..623445,624368..624430,625747..625856,627513..627613,629582..629679,631738..631892,632362..632505,633767..633891,635800..635942,639024..639133,639369..640832)
location: region:621611-640832:1
so has part: feature:621611-621701:1:exon
so has part: feature:622082-622146:1:exon
so has part: feature:623386-623445:1:exon
so has part: feature:624368-624430:1:exon
so has part: feature:625747-625856:1:exon
so has part: feature:627513-627613:1:exon
so has part: feature:629582-629679:1:exon
so has part: feature:631738-631892:1:exon
so has part: feature:632362-632505:1:exon
so has part: feature:633767-633891:1:exon
so has part: feature:635800-635942:1:exon
so has part: feature:639024-639133:1:exon
so has part: feature:639369-640832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621611-621701:1:exon

position:621701:1
position: 621701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622082-622146:1:exon

position:622082:1
position: 622082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622146:1
position: 622146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:623386-623445:1:exon

position:623386:1
position: 623386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623445:1
position: 623445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:624368-624430:1:exon

position:624368:1
position: 624368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624430:1
position: 624430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:625747-625856:1:exon

position:625747:1
position: 625747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625856:1
position: 625856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:627513-627613:1:exon

position:627513:1
position: 627513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:627613:1
position: 627613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:629582-629679:1:exon

position:629582:1
position: 629582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:629679:1
position: 629679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:631738-631892:1:exon

position:631738:1
position: 631738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631892:1
position: 631892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:632362-632505:1:exon

position:632362:1
position: 632362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:632505:1
position: 632505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:633767-633891:1:exon

position:633767:1
position: 633767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633891:1
position: 633891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:635800-635942:1:exon

position:635800:1
position: 635800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635942:1
position: 635942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:639024-639133:1:exon

position:639024:1
position: 639024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639133:1
position: 639133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:639369-640832:1:exon

position:639369:1
position: 639369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIGU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PIGU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol glycan anchor biosynthesis class U protein
translation: MAAGSSKPLPDGPSTRDQAVELDDNLVEGLALLDLGVSPYSGAIFHETPLIIYLFHFLIEYAELVFMITDVLTAVALYLAIQDYNKVVFKKQKLLIELDKYAPDVAELIRTPMEMHYIPLKVALVYLLNPYTVMSCVAKSTCAISNTVIAFFILATIRGSAFLSAVFLALATYQSLYPITLFAPALLYLLQRQFIPIKPKSKSFWLFTMQYAALYLCSLVVIICLSFFLLNSWDFIPSVYGFILSVPDLTPNIGLFWYFFAEMFEHFSLFFVCVFQINVFFYTIPLAVKLKEHPVFFMFVQLAIISIFKSYPTVGDVALYMAFLPVWSHLYRFLRNIFILSCMLIACSLLFPVLWHLWIFAGSANSNFYYAITLTFNIGQILLISDYFYAFLRREYYLTHGLHLTKQDGTEAMLVLNCAFY
SIO_010081: PIGU
subclass of: SO_0000673
so part of: PIGU
location: join(621626..621701,622082..622146,623386..623445,624368..624430,625747..625856,627513..627613,629582..629679,631738..631892,632362..632505,633767..633891,635800..635942,639024..639133,639369..639384)
location: region:621626-639384:1
so has part: feature:621626-621701:1:exon
so has part: feature:622082-622146:1:exon
so has part: feature:623386-623445:1:exon
so has part: feature:624368-624430:1:exon
so has part: feature:625747-625856:1:exon
so has part: feature:627513-627613:1:exon
so has part: feature:629582-629679:1:exon
so has part: feature:631738-631892:1:exon
so has part: feature:632362-632505:1:exon
so has part: feature:633767-633891:1:exon
so has part: feature:635800-635942:1:exon
so has part: feature:639024-639133:1:exon
so has part: feature:639369-639384:1:exon

XP_010720523.1
type: Protein
SIO_000068: ncbiprotein

position:621626:1
position: 621626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639384:1
position: 639384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621626-621701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:622082-622146:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623386-623445:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:624368-624430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:625747-625856:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:627513-627613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:629582-629679:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:631738-631892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:632362-632505:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:633767-633891:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:635800-635942:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:639024-639133:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:639369-639384:1:exon

TLDC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TLDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 642872..646928
location: region:642872-646928:1
so has part: feature:642872-646928:1:exon
subclass of: SO_0000010

100538705
type: Gene
SIO_000068: ncbigene

position:642872:1
position: 642872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646928:1
position: 646928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642872-646928:1:exon

TLDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TLDC2
product: TBC/LysM-associated domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_010722224.3
SIO_010081: TLDC2
subclass of: SO_0000673
so part of: TLDC2
location: join(642872..642978,643639..643800,644904..644999,645386..645459,645535..646928)
location: region:642872-646928:1
so has part: feature:642872-642978:1:exon
so has part: feature:643639-643800:1:exon
so has part: feature:644904-644999:1:exon
so has part: feature:645386-645459:1:exon
so has part: feature:645535-646928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:642872-642978:1:exon

position:642978:1
position: 642978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:643639-643800:1:exon

position:643639:1
position: 643639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643800:1
position: 643800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:644904-644999:1:exon

position:644904:1
position: 644904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644999:1
position: 644999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:645386-645459:1:exon

position:645386:1
position: 645386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645459:1
position: 645459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:645535-646928:1:exon

position:645535:1
position: 645535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TLDC2
product: TBC/LysM-associated domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010722222.3
SIO_010081: TLDC2
subclass of: SO_0000673
so part of: TLDC2
location: join(642872..642978,643639..643800,644595..644747,644904..644999,645386..645459,645535..646925)
location: region:642872-646925:1
so has part: feature:642872-642978:1:exon
so has part: feature:643639-643800:1:exon
so has part: feature:644595-644747:1:exon
so has part: feature:644904-644999:1:exon
so has part: feature:645386-645459:1:exon
so has part: feature:645535-646925:1:exon

position:646925:1
position: 646925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642872-642978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643639-643800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644595-644747:1:exon

position:644595:1
position: 644595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644747:1
position: 644747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:644904-644999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:645386-645459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645535-646925:1:exon

TLDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TLDC2
product: TBC/LysM-associated domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010722223.3
SIO_010081: TLDC2
subclass of: SO_0000673
so part of: TLDC2
location: join(642872..642978,643639..643800,644595..644747,644904..644999,645386..645459,645519..645646)
location: region:642872-645646:1
so has part: feature:642872-642978:1:exon
so has part: feature:643639-643800:1:exon
so has part: feature:644595-644747:1:exon
so has part: feature:644904-644999:1:exon
so has part: feature:645386-645459:1:exon
so has part: feature:645519-645646:1:exon

position:645646:1
position: 645646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642872-642978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643639-643800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644595-644747:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644904-644999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:645386-645459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645519-645646:1:exon

position:645519:1
position: 645519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TLDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TLDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLD domain-containing protein 2 isoform X1
translation: MRGLRAHYHLLPDQDEDLPTECTEPDSEGQPGWEGAPVTPLAPEEPCRLVLSTPSSILQEREIEELGPHLPTRLRQQPWSLLYCTARDGFSLRTLYRCTGRLSSPALLLIRDTEAQAFGAFSTSPIHMSNGFYGTGETFLFSFSPELKVFRWTGRNNFFLKGDTDLLMVGGGSGKFGLWLDGDLHHGGSCPCETFNNESLSPRGEFCIRDLEVWGLA
SIO_010081: TLDC2
subclass of: SO_0000673
so part of: TLDC2
location: join(642946..642978,643639..643800,644595..644747,644904..644999,645386..645459,645535..645670)
location: region:642946-645670:1
so has part: feature:642946-642978:1:exon
so has part: feature:643639-643800:1:exon
so has part: feature:644595-644747:1:exon
so has part: feature:644904-644999:1:exon
so has part: feature:645386-645459:1:exon
so has part: feature:645535-645670:1:exon

XP_010720524.1
type: Protein
SIO_000068: ncbiprotein

position:642946:1
position: 642946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:645670:1
position: 645670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642946-642978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643639-643800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644595-644747:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644904-644999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:645386-645459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645535-645670:1:exon

TLDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TLDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLD domain-containing protein 2 isoform X3
translation: MRGLRAHYHLLPDQDEDLPTECTEPDSEGQPGWEGAPVTPLAPEEPCRLVLSTPSSILQEREIEEAFGAFSTSPIHMSNGFYGTGETFLFSFSPELKVFRWTGRNNFFLKGDTDLLMVGGGSGKFGLWLDGDLHHGGSCPCETFNNESLSPRGEFCIRDLEVWGLA
SIO_010081: TLDC2
subclass of: SO_0000673
so part of: TLDC2
location: join(642946..642978,643639..643800,644904..644999,645386..645459,645535..645670)
location: region:642946-645670:1
so has part: feature:642946-642978:1:exon
so has part: feature:643639-643800:1:exon
so has part: feature:644904-644999:1:exon
so has part: feature:645386-645459:1:exon
so has part: feature:645535-645670:1:exon

XP_010720526.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:642946-642978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643639-643800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644904-644999:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:645386-645459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:645535-645670:1:exon

TLDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TLDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLD domain-containing protein 2 isoform X2
translation: MRGLRAHYHLLPDQDEDLPTECTEPDSEGQPGWEGAPVTPLAPEEPCRLVLSTPSSILQEREIEELGPHLPTRLRQQPWSLLYCTARDGFSLRTLYRCTGRLSSPALLLIRDTEAQAFGAFSTSPIHMSNGFYGTGETFLFSFSPELKVFRWTGRNNFFLKGDTDLLMVGGGSLCVSQRQVWAVAGRGSAPRGELPLRDLQ
SIO_010081: TLDC2
subclass of: SO_0000673
so part of: TLDC2
location: join(642946..642978,643639..643800,644595..644747,644904..644999,645386..645459,645519..645606)
location: region:642946-645606:1
so has part: feature:642946-642978:1:exon
so has part: feature:643639-643800:1:exon
so has part: feature:644595-644747:1:exon
so has part: feature:644904-644999:1:exon
so has part: feature:645386-645459:1:exon
so has part: feature:645519-645606:1:exon

XP_010720525.1
type: Protein
SIO_000068: ncbiprotein

position:645606:1
position: 645606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:642946-642978:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643639-643800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:644595-644747:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644904-644999:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:645386-645459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:645519-645606:1:exon

SAMHD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SAMHD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(652023..>673240)
location: region:652023-673240:-1
so has part: feature:652023-673240:-1:exon
subclass of: SO_0000010

100538861
type: Gene
SIO_000068: ncbigene

position:652023:-1
position: 652023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673240:-1
position: 673240
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:652023-673240:-1:exon

SAMHD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SAMHD1
product: SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_031556591.1
SIO_010081: SAMHD1
subclass of: SO_0000673
so part of: SAMHD1
location: complement(join(652023..652236,654298..654435,654793..654897,655193..655288,656767..656906,659432..659546,661040..661131,661237..661345,661452..661552,663641..663796,665372..665442,665808..665923,668502..668662,670476..670545,673227..>673240))
location: region:652023-673240:-1
so has part: feature:673227-673240:-1:exon
so has part: feature:670476-670545:-1:exon
so has part: feature:668502-668662:-1:exon
so has part: feature:665808-665923:-1:exon
so has part: feature:665372-665442:-1:exon
so has part: feature:663641-663796:-1:exon
so has part: feature:661452-661552:-1:exon
so has part: feature:661237-661345:-1:exon
so has part: feature:661040-661131:-1:exon
so has part: feature:659432-659546:-1:exon
so has part: feature:656767-656906:-1:exon
so has part: feature:655193-655288:-1:exon
so has part: feature:654793-654897:-1:exon
so has part: feature:654298-654435:-1:exon
so has part: feature:652023-652236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:673227-673240:-1:exon

position:673227:-1
position: 673227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:670476-670545:-1:exon

position:670476:-1
position: 670476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670545:-1
position: 670545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:668502-668662:-1:exon

position:668502:-1
position: 668502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668662:-1
position: 668662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:665808-665923:-1:exon

position:665808:-1
position: 665808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665923:-1
position: 665923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:665372-665442:-1:exon

position:665372:-1
position: 665372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665442:-1
position: 665442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:663641-663796:-1:exon

position:663641:-1
position: 663641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663796:-1
position: 663796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:661452-661552:-1:exon

position:661452:-1
position: 661452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661552:-1
position: 661552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:661237-661345:-1:exon

position:661237:-1
position: 661237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661345:-1
position: 661345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:661040-661131:-1:exon

position:661040:-1
position: 661040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:661131:-1
position: 661131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:659432-659546:-1:exon

position:659432:-1
position: 659432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659546:-1
position: 659546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:656767-656906:-1:exon

position:656767:-1
position: 656767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656906:-1
position: 656906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:655193-655288:-1:exon

position:655193:-1
position: 655193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655288:-1
position: 655288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:654793-654897:-1:exon

position:654793:-1
position: 654793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654897:-1
position: 654897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:654298-654435:-1:exon

position:654298:-1
position: 654298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654435:-1
position: 654435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:652023-652236:-1:exon

position:652236:-1
position: 652236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SAMHD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SAMHD1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: deoxynucleoside triphosphate triphosphohydrolase SAMHD1
translation: SLWNSHPEERLKVLACLSQLRQTVDIMKVFNDPVHGHIEMHPLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRELKERQPELGITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLARQGLNWKHETASVEMFEHLITSNKLEEVMEWHGLILEEDMVFIKEQIAGPIDETACEESWPYRGRPKEKSFLYEIVANKKNGIDVDKWDYFARDCHHLGIQNNFDYRRLIKFTRVCEAGNQKHICARDKEVGNLYDMFHTRNCLHRRAYQHKVGNIIEIMITEAFQKADXFFQIEGSEGKLYQISTAMEDMEAYTKLTDNIYLEILHSSRPELSEAREILRKIERRELHKFLGETQPEKMNEIPKDEYDDLPGDIANSKPEKDPPDVELTAEDFIVDVVNMDYGMKDQNPIDNVLFYCKADPSKAIKISKEQVSRLLPGTFSEQVIRVYCKRQDPDIVSAAKQYFVQWCIKRNFTKPQDGDVVAPHLTPLKQSWNKRSRDEHTTASEPSCKQKLSFNK
SIO_010081: SAMHD1
subclass of: SO_0000673
so part of: SAMHD1
location: complement(join(652114..652236,654298..654435,654793..654897,655193..655288,656767..656906,659432..659546,661040..661131,661237..661345,661452..661552,663641..663796,665372..665442,665808..665923,668502..668662,670476..670545,673227..>673240))
location: region:652114-673240:-1
so has part: feature:673227-673240:-1:exon
so has part: feature:670476-670545:-1:exon
so has part: feature:668502-668662:-1:exon
so has part: feature:665808-665923:-1:exon
so has part: feature:665372-665442:-1:exon
so has part: feature:663641-663796:-1:exon
so has part: feature:661452-661552:-1:exon
so has part: feature:661237-661345:-1:exon
so has part: feature:661040-661131:-1:exon
so has part: feature:659432-659546:-1:exon
so has part: feature:656767-656906:-1:exon
so has part: feature:655193-655288:-1:exon
so has part: feature:654793-654897:-1:exon
so has part: feature:654298-654435:-1:exon
so has part: feature:652114-652236:-1:exon

XP_031412451.1
type: Protein
SIO_000068: ncbiprotein

position:652114:-1
position: 652114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:673227-673240:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670476-670545:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:668502-668662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665808-665923:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:665372-665442:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:663641-663796:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:661452-661552:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:661237-661345:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:661040-661131:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:659432-659546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:656767-656906:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:655193-655288:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:654793-654897:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:654298-654435:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:652114-652236:-1:exon

LOC109370726
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 674733..675465
location: region:674733-675465:1
so has part: feature:674733-675465:1:exon
subclass of: SO_0000011

109370726
type: Gene
SIO_000068: ncbigene

position:674733:1
position: 674733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:675465:1
position: 675465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674733-675465:1:exon

LOC109370726
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370726
product: uncharacterized LOC109370726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 119 samples with support for all annotated introns
transcript id: XR_002121080.1
SIO_010081: LOC109370726
subclass of: SO_0000673
so part of: LOC109370726
location: join(674733..675256,675329..675465)
location: region:674733-675465:1
so has part: feature:674733-675256:1:exon
so has part: feature:675329-675465:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:674733-675256:1:exon

position:675256:1
position: 675256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675329-675465:1:exon

position:675329:1
position: 675329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(679531..698955)
location: region:679531-698955:-1
so has part: feature:679531-698955:-1:exon
subclass of: SO_0000010

100539013
type: Gene
SIO_000068: ncbigene

position:679531:-1
position: 679531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698955:-1
position: 698955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679531-698955:-1:exon

RBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBL1
product: RB transcriptional corepressor like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 136 samples with support for all annotated introns
transcript id: XM_010722225.3
SIO_010081: RBL1
subclass of: SO_0000673
so part of: RBL1
location: complement(join(679531..680291,680555..680719,682274..682440,683529..683613,683982..684053,684544..684720,685434..685612,686575..686841,688197..688332,688500..688664,689652..689789,690200..690303,690808..690920,692503..692669,693477..693663,696369..696418,697127..697287,697398..697526,697619..697683,698744..698955))
location: region:679531-698955:-1
so has part: feature:698744-698955:-1:exon
so has part: feature:697619-697683:-1:exon
so has part: feature:697398-697526:-1:exon
so has part: feature:697127-697287:-1:exon
so has part: feature:696369-696418:-1:exon
so has part: feature:693477-693663:-1:exon
so has part: feature:692503-692669:-1:exon
so has part: feature:690808-690920:-1:exon
so has part: feature:690200-690303:-1:exon
so has part: feature:689652-689789:-1:exon
so has part: feature:688500-688664:-1:exon
so has part: feature:688197-688332:-1:exon
so has part: feature:686575-686841:-1:exon
so has part: feature:685434-685612:-1:exon
so has part: feature:684544-684720:-1:exon
so has part: feature:683982-684053:-1:exon
so has part: feature:683529-683613:-1:exon
so has part: feature:682274-682440:-1:exon
so has part: feature:680555-680719:-1:exon
so has part: feature:679531-680291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:698744-698955:-1:exon

position:698744:-1
position: 698744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:697619-697683:-1:exon

position:697619:-1
position: 697619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697683:-1
position: 697683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:697398-697526:-1:exon

position:697398:-1
position: 697398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697526:-1
position: 697526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:697127-697287:-1:exon

position:697127:-1
position: 697127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697287:-1
position: 697287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:696369-696418:-1:exon

position:696369:-1
position: 696369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696418:-1
position: 696418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:693477-693663:-1:exon

position:693477:-1
position: 693477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693663:-1
position: 693663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:692503-692669:-1:exon

position:692503:-1
position: 692503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692669:-1
position: 692669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:690808-690920:-1:exon

position:690808:-1
position: 690808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690920:-1
position: 690920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:690200-690303:-1:exon

position:690200:-1
position: 690200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690303:-1
position: 690303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:689652-689789:-1:exon

position:689652:-1
position: 689652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689789:-1
position: 689789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:688500-688664:-1:exon

position:688500:-1
position: 688500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688664:-1
position: 688664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:688197-688332:-1:exon

position:688197:-1
position: 688197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688332:-1
position: 688332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:686575-686841:-1:exon

position:686575:-1
position: 686575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686841:-1
position: 686841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:685434-685612:-1:exon

position:685434:-1
position: 685434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685612:-1
position: 685612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:684544-684720:-1:exon

position:684544:-1
position: 684544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684720:-1
position: 684720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:683982-684053:-1:exon

position:683982:-1
position: 683982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684053:-1
position: 684053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:683529-683613:-1:exon

position:683529:-1
position: 683529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683613:-1
position: 683613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:682274-682440:-1:exon

position:682274:-1
position: 682274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682440:-1
position: 682440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:680555-680719:-1:exon

position:680555:-1
position: 680555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680719:-1
position: 680719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:679531-680291:-1:exon

position:680291:-1
position: 680291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBL1
product: RB transcriptional corepressor like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_019622129.2
SIO_010081: RBL1
subclass of: SO_0000673
so part of: RBL1
location: complement(join(679531..680291,680555..680719,682274..682440,683529..683613,683982..684053,684544..684720,685434..685612,686575..686841,688197..688332,688500..688664,689652..689789,690200..690303,690808..690920,692503..692669,693477..693663,694633..695262))
location: region:679531-695262:-1
so has part: feature:694633-695262:-1:exon
so has part: feature:693477-693663:-1:exon
so has part: feature:692503-692669:-1:exon
so has part: feature:690808-690920:-1:exon
so has part: feature:690200-690303:-1:exon
so has part: feature:689652-689789:-1:exon
so has part: feature:688500-688664:-1:exon
so has part: feature:688197-688332:-1:exon
so has part: feature:686575-686841:-1:exon
so has part: feature:685434-685612:-1:exon
so has part: feature:684544-684720:-1:exon
so has part: feature:683982-684053:-1:exon
so has part: feature:683529-683613:-1:exon
so has part: feature:682274-682440:-1:exon
so has part: feature:680555-680719:-1:exon
so has part: feature:679531-680291:-1:exon

position:695262:-1
position: 695262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694633-695262:-1:exon

position:694633:-1
position: 694633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:693477-693663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692503-692669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:690808-690920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:690200-690303:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689652-689789:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:688500-688664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:688197-688332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:686575-686841:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685434-685612:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684544-684720:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:683982-684053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:683529-683613:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:682274-682440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:680555-680719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:679531-680291:-1:exon

RBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-like protein 1 isoform X1
translation: MKKWMDMSNVPQEFRERVERLERNFEVSTVIFRKFEPIFLDIFQNPNEETSKPQRSRKQRRVLCGVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFANAILCPNRRDLLNPSFKGLPADFHAPEMKASEDPPCIIATLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLCNFTENNKALNKEYEEYVLTVGDFDERVFLGADAEEEIGTPRKFPADLQVGKTAARAHVECHLQQHFEKKRSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQNIVAGLKNAPSDLLIAIFESCARSPAESIMNRVREIGEAFCHSYTQPTDELPGSHIDFAVNRLKLAEILYYKILETIMVQEMRRLHGKDMTALLEQDVFHRSLMACCLEIVLFAYSSPRTFPWIIEVLDLRPFYFYKVIEVLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWTALQASGNRVPTCEEVIFPNNFEANNGGSGLGHLPMMPISPIVHPRVKEVRTDLGGSLRRDTQPLSPISVHERYSSPTAGSAKRRLFGDDSPKEMQMEKILTEGTKLTIAPASSIAAENVSISPGQTVLTVTTATVAGKAGQKVTIPLHGITNELGGITLIPISMNLGQAPKIEAQNPCHPQVNQDQEVHLSSGNKPKKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSASVLLERNANQDVQMTEDSSVKSGNSLGRSAAENSTELGMEERGDLIKFYNAVYVGRVKSFALKYDIANQDHVMEAPPLSPFPSIKQQPVSPRRISQQHSVYVSPHKNSACLTPRTALLYKFSGSPSKSLKDINNMIKQGEHRSKKRAITIDSDTEPPMKRLCQENDDVLLKRLQDVVSERANH
SIO_010081: RBL1
subclass of: SO_0000673
so part of: RBL1
location: complement(join(680121..680291,680555..680719,682274..682440,683529..683613,683982..684053,684544..684720,685434..685612,686575..686841,688197..688332,688500..688664,689652..689789,690200..690303,690808..690920,692503..692669,693477..693663,696369..696418,697127..697287,697398..697526,697619..697683,698744..698922))
location: region:680121-698922:-1
so has part: feature:698744-698922:-1:exon
so has part: feature:697619-697683:-1:exon
so has part: feature:697398-697526:-1:exon
so has part: feature:697127-697287:-1:exon
so has part: feature:696369-696418:-1:exon
so has part: feature:693477-693663:-1:exon
so has part: feature:692503-692669:-1:exon
so has part: feature:690808-690920:-1:exon
so has part: feature:690200-690303:-1:exon
so has part: feature:689652-689789:-1:exon
so has part: feature:688500-688664:-1:exon
so has part: feature:688197-688332:-1:exon
so has part: feature:686575-686841:-1:exon
so has part: feature:685434-685612:-1:exon
so has part: feature:684544-684720:-1:exon
so has part: feature:683982-684053:-1:exon
so has part: feature:683529-683613:-1:exon
so has part: feature:682274-682440:-1:exon
so has part: feature:680555-680719:-1:exon
so has part: feature:680121-680291:-1:exon

XP_010720527.1
type: Protein
SIO_000068: ncbiprotein

position:680121:-1
position: 680121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698922:-1
position: 698922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698744-698922:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:697619-697683:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:697398-697526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:697127-697287:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:696369-696418:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:693477-693663:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:692503-692669:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:690808-690920:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:690200-690303:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:689652-689789:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:688500-688664:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:688197-688332:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:686575-686841:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:685434-685612:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:684544-684720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:683982-684053:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:683529-683613:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:682274-682440:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:680555-680719:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:680121-680291:-1:exon

RBL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-like protein 1 isoform X2
translation: MSFSPLHGHSAFVYNSEPTLCKNQTSGYQHCKALNKEYEEYVLTVGDFDERVFLGADAEEEIGTPRKFPADLQVGKTAARAHVECHLQQHFEKKRSFAPSTPLTGRRYLREKEAVITPVASATQSVSRLQNIVAGLKNAPSDLLIAIFESCARSPAESIMNRVREIGEAFCHSYTQPTDELPGSHIDFAVNRLKLAEILYYKILETIMVQEMRRLHGKDMTALLEQDVFHRSLMACCLEIVLFAYSSPRTFPWIIEVLDLRPFYFYKVIEVLIRSEEGLSRDMVKHLNSIEEQILESLAWTRDSALWTALQASGNRVPTCEEVIFPNNFEANNGGSGLGHLPMMPISPIVHPRVKEVRTDLGGSLRRDTQPLSPISVHERYSSPTAGSAKRRLFGDDSPKEMQMEKILTEGTKLTIAPASSIAAENVSISPGQTVLTVTTATVAGKAGQKVTIPLHGITNELGGITLIPISMNLGQAPKIEAQNPCHPQVNQDQEVHLSSGNKPKKTGSLALFYRKVYHLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQLLLCAFYIMAKVTKEERTFQDIMKSYRNQPQANSHVYRSVLLRNTSASVLLERNANQDVQMTEDSSVKSGNSLGRSAAENSTELGMEERGDLIKFYNAVYVGRVKSFALKYDIANQDHVMEAPPLSPFPSIKQQPVSPRRISQQHSVYVSPHKNSACLTPRTALLYKFSGSPSKSLKDINNMIKQGEHRSKKRAITIDSDTEPPMKRLCQENDDVLLKRLQDVVSERANH
SIO_010081: RBL1
subclass of: SO_0000673
so part of: RBL1
location: complement(join(680121..680291,680555..680719,682274..682440,683529..683613,683982..684053,684544..684720,685434..685612,686575..686841,688197..688332,688500..688664,689652..689789,690200..690303,690808..690920,692503..692669,693477..693663,694633..694724))
location: region:680121-694724:-1
so has part: feature:694633-694724:-1:exon
so has part: feature:693477-693663:-1:exon
so has part: feature:692503-692669:-1:exon
so has part: feature:690808-690920:-1:exon
so has part: feature:690200-690303:-1:exon
so has part: feature:689652-689789:-1:exon
so has part: feature:688500-688664:-1:exon
so has part: feature:688197-688332:-1:exon
so has part: feature:686575-686841:-1:exon
so has part: feature:685434-685612:-1:exon
so has part: feature:684544-684720:-1:exon
so has part: feature:683982-684053:-1:exon
so has part: feature:683529-683613:-1:exon
so has part: feature:682274-682440:-1:exon
so has part: feature:680555-680719:-1:exon
so has part: feature:680121-680291:-1:exon

XP_019477674.1
type: Protein
SIO_000068: ncbiprotein

position:694724:-1
position: 694724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:694633-694724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:693477-693663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:692503-692669:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:690808-690920:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:690200-690303:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:689652-689789:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:688500-688664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:688197-688332:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:686575-686841:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:685434-685612:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:684544-684720:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:683982-684053:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:683529-683613:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:682274-682440:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:680555-680719:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:680121-680291:-1:exon

LOC100539169
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100539169
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(699145..752408)
location: region:699145-752408:-1
so has part: feature:699145-752408:-1:exon
subclass of: SO_0000010

100539169
type: Gene
SIO_000068: ncbigene

position:699145:-1
position: 699145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:752408:-1
position: 752408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699145-752408:-1:exon

LOC100539169
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100539169
product: chromodomain-helicase-DNA-binding protein 6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010722226.3
SIO_010081: LOC100539169
subclass of: SO_0000673
so part of: LOC100539169
location: complement(join(699145..702591,705744..705863,708024..708215,708750..709196,709710..709916,710194..710342,710927..712477,713593..713801,715620..715839,716573..716627,717213..717273,717545..717674,717959..718062,718895..718984,719306..719465,723217..723416,723840..724042,725154..725264,726279..726458,727132..727296,727640..727835,728707..728917,729447..729702,730507..730650,731579..731755,732208..732451,733006..733127,733441..733575,733848..733934,735125..735242,735583..735641,736103..736168,737001..737151,737594..737741,740577..741073,749199..749254,749701..752408))
location: region:699145-752408:-1
so has part: feature:749701-752408:-1:exon
so has part: feature:749199-749254:-1:exon
so has part: feature:740577-741073:-1:exon
so has part: feature:737594-737741:-1:exon
so has part: feature:737001-737151:-1:exon
so has part: feature:736103-736168:-1:exon
so has part: feature:735583-735641:-1:exon
so has part: feature:735125-735242:-1:exon
so has part: feature:733848-733934:-1:exon
so has part: feature:733441-733575:-1:exon
so has part: feature:733006-733127:-1:exon
so has part: feature:732208-732451:-1:exon
so has part: feature:731579-731755:-1:exon
so has part: feature:730507-730650:-1:exon
so has part: feature:729447-729702:-1:exon
so has part: feature:728707-728917:-1:exon
so has part: feature:727640-727835:-1:exon
so has part: feature:727132-727296:-1:exon
so has part: feature:726279-726458:-1:exon
so has part: feature:725154-725264:-1:exon
so has part: feature:723840-724042:-1:exon
so has part: feature:723217-723416:-1:exon
so has part: feature:719306-719465:-1:exon
so has part: feature:718895-718984:-1:exon
so has part: feature:717959-718062:-1:exon
so has part: feature:717545-717674:-1:exon
so has part: feature:717213-717273:-1:exon
so has part: feature:716573-716627:-1:exon
so has part: feature:715620-715839:-1:exon
so has part: feature:713593-713801:-1:exon
so has part: feature:710927-712477:-1:exon
so has part: feature:710194-710342:-1:exon
so has part: feature:709710-709916:-1:exon
so has part: feature:708750-709196:-1:exon
so has part: feature:708024-708215:-1:exon
so has part: feature:705744-705863:-1:exon
so has part: feature:699145-702591:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:749701-752408:-1:exon

position:749701:-1
position: 749701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:749199-749254:-1:exon

position:749199:-1
position: 749199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749254:-1
position: 749254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:740577-741073:-1:exon

position:740577:-1
position: 740577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741073:-1
position: 741073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:737594-737741:-1:exon

position:737594:-1
position: 737594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737741:-1
position: 737741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:737001-737151:-1:exon

position:737001:-1
position: 737001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737151:-1
position: 737151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:736103-736168:-1:exon

position:736103:-1
position: 736103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736168:-1
position: 736168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:735583-735641:-1:exon

position:735583:-1
position: 735583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735641:-1
position: 735641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:735125-735242:-1:exon

position:735125:-1
position: 735125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735242:-1
position: 735242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:733848-733934:-1:exon

position:733848:-1
position: 733848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733934:-1
position: 733934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:733441-733575:-1:exon

position:733441:-1
position: 733441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733575:-1
position: 733575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:733006-733127:-1:exon

position:733006:-1
position: 733006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733127:-1
position: 733127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:732208-732451:-1:exon

position:732208:-1
position: 732208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732451:-1
position: 732451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:731579-731755:-1:exon

position:731579:-1
position: 731579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731755:-1
position: 731755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:730507-730650:-1:exon

position:730507:-1
position: 730507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730650:-1
position: 730650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:729447-729702:-1:exon

position:729447:-1
position: 729447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729702:-1
position: 729702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:728707-728917:-1:exon

position:728707:-1
position: 728707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728917:-1
position: 728917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:727640-727835:-1:exon

position:727640:-1
position: 727640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727835:-1
position: 727835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:727132-727296:-1:exon

position:727132:-1
position: 727132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727296:-1
position: 727296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:726279-726458:-1:exon

position:726279:-1
position: 726279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726458:-1
position: 726458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:725154-725264:-1:exon

position:725154:-1
position: 725154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725264:-1
position: 725264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:723840-724042:-1:exon

position:723840:-1
position: 723840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724042:-1
position: 724042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:723217-723416:-1:exon

position:723217:-1
position: 723217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723416:-1
position: 723416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:719306-719465:-1:exon

position:719306:-1
position: 719306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719465:-1
position: 719465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:718895-718984:-1:exon

position:718895:-1
position: 718895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718984:-1
position: 718984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:717959-718062:-1:exon

position:717959:-1
position: 717959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718062:-1
position: 718062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:717545-717674:-1:exon

position:717545:-1
position: 717545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717674:-1
position: 717674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:717213-717273:-1:exon

position:717213:-1
position: 717213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717273:-1
position: 717273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:716573-716627:-1:exon

position:716573:-1
position: 716573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716627:-1
position: 716627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:715620-715839:-1:exon

position:715620:-1
position: 715620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715839:-1
position: 715839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:713593-713801:-1:exon

position:713593:-1
position: 713593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713801:-1
position: 713801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:710927-712477:-1:exon

position:710927:-1
position: 710927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712477:-1
position: 712477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:710194-710342:-1:exon

position:710194:-1
position: 710194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710342:-1
position: 710342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:709710-709916:-1:exon

position:709710:-1
position: 709710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709916:-1
position: 709916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:708750-709196:-1:exon

position:708750:-1
position: 708750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709196:-1
position: 709196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:708024-708215:-1:exon

position:708024:-1
position: 708024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708215:-1
position: 708215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:705744-705863:-1:exon

position:705744:-1
position: 705744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705863:-1
position: 705863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:699145-702591:-1:exon

position:702591:-1
position: 702591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100539169
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100539169
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 6
translation: MVSSSKPGRATWISEITFIPDLMIMKIQKKDKQPPSLKVLSRSPMSDASDTWECKAQGPLAGSEEQQSHRATATEAGGQCLCPEEQPDGALLRRPSAQNGMQDTGAVGTGVKKKRKKKDLGEQEGGEKAAVEVKPKRRREPKEPKEPKKAKEPKKQKEPKQREVTKKPRKPREPKAPKEPKDRKSGSEPGPRTRPKKSSKEQGPTPVEKKKKGKRKNEIPVDSLDLDQDLLSPSVQSPEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASRMVQKETHPGGLTFEMEEFYVKYRNFSYLHCKWATLEELEKDPRISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDPDTGEEVTHYLVKWCSLPYEESTWELEEDVDPGKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSNQLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFEMILADCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGGTNGVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRSRRFNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPRGRKGKKTKNQMLLPEIKNADWLATCNPEVVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAEVLGEAADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKLLSAEQGISDGAQDTAERGTMEKEESSGEKLEGLPKQEDVAAGAGEAGEKRDEPSAAQDGSDSDRSCWPVSSALTARLRRLVTVYQRCNRKELPARSEMLVPGNHGYWLQDEVFRRASEMDSVNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKTFDWTQFRAISRLEKKTDESLEKYFYSFVAMCKNVCGLPLWKEDGPPDPDIYVEPITEERAARTLYRIELLRKVREQVLRCPQLHERLKLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTGIPGSETLCCLYQTNSKLYSSPLYSQVDRTCESLENETESQIKLENTDSTMSQAGGSPPDANCETFMSKVRDIISSNYDESSLPDSLMCMMYDEKVCNSEQSSLARDSPTCTDVGSSIAKLSEGKLEGDEDPSSCDAEAMREASFLEGLQVGCDQMDCQNEEAEPSPSTLESDPLRSVPAELCEAVQQKRDLGSPAPVLPEHRAMEGVISVGLYSPSLHNYDMKVPPEQRFINLLQEKGMEAKAGPSQSHSEEDEEEEDDDNSEVAADIAEGLSGPRARASCDELEGEEQSPGLPTHEDVCPEDVNSERGSLELGTLEVPAEPGPEGREDHSLDEENTLQHLPGQSQSRPFSLPAPPLGALGTQP…
SIO_010081: LOC100539169
subclass of: SO_0000673
so part of: LOC100539169
location: complement(join(701701..702591,705744..705863,708024..708215,708750..709196,709710..709916,710194..710342,710927..712477,713593..713801,715620..715839,716573..716627,717213..717273,717545..717674,717959..718062,718895..718984,719306..719465,723217..723416,723840..724042,725154..725264,726279..726458,727132..727296,727640..727835,728707..728917,729447..729702,730507..730650,731579..731755,732208..732451,733006..733127,733441..733575,733848..733934,735125..735242,735583..735641,736103..736168,737001..737151,737594..737741,740577..741073,749199..749254,749701..749743))
location: region:701701-749743:-1
so has part: feature:749701-749743:-1:exon
so has part: feature:749199-749254:-1:exon
so has part: feature:740577-741073:-1:exon
so has part: feature:737594-737741:-1:exon
so has part: feature:737001-737151:-1:exon
so has part: feature:736103-736168:-1:exon
so has part: feature:735583-735641:-1:exon
so has part: feature:735125-735242:-1:exon
so has part: feature:733848-733934:-1:exon
so has part: feature:733441-733575:-1:exon
so has part: feature:733006-733127:-1:exon
so has part: feature:732208-732451:-1:exon
so has part: feature:731579-731755:-1:exon
so has part: feature:730507-730650:-1:exon
so has part: feature:729447-729702:-1:exon
so has part: feature:728707-728917:-1:exon
so has part: feature:727640-727835:-1:exon
so has part: feature:727132-727296:-1:exon
so has part: feature:726279-726458:-1:exon
so has part: feature:725154-725264:-1:exon
so has part: feature:723840-724042:-1:exon
so has part: feature:723217-723416:-1:exon
so has part: feature:719306-719465:-1:exon
so has part: feature:718895-718984:-1:exon
so has part: feature:717959-718062:-1:exon
so has part: feature:717545-717674:-1:exon
so has part: feature:717213-717273:-1:exon
so has part: feature:716573-716627:-1:exon
so has part: feature:715620-715839:-1:exon
so has part: feature:713593-713801:-1:exon
so has part: feature:710927-712477:-1:exon
so has part: feature:710194-710342:-1:exon
so has part: feature:709710-709916:-1:exon
so has part: feature:708750-709196:-1:exon
so has part: feature:708024-708215:-1:exon
so has part: feature:705744-705863:-1:exon
so has part: feature:701701-702591:-1:exon

XP_010720528.2
type: Protein
SIO_000068: ncbiprotein

position:701701:-1
position: 701701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749743:-1
position: 749743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:749701-749743:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:749199-749254:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:740577-741073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:737594-737741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:737001-737151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:736103-736168:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:735583-735641:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:735125-735242:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:733848-733934:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:733441-733575:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:733006-733127:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:732208-732451:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:731579-731755:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:730507-730650:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:729447-729702:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:728707-728917:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:727640-727835:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727132-727296:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:726279-726458:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:725154-725264:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:723840-724042:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:723217-723416:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:719306-719465:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:718895-718984:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:717959-718062:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:717545-717674:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:717213-717273:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:716573-716627:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:715620-715839:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:713593-713801:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:710927-712477:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:710194-710342:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:709710-709916:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:708750-709196:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:708024-708215:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:705744-705863:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:701701-702591:-1:exon

RALGAPB
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RALGAPB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(781890..842637)
location: region:781890-842637:-1
so has part: feature:781890-842637:-1:exon
subclass of: SO_0000010

100550003
type: Gene
SIO_000068: ncbigene

position:781890:-1
position: 781890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842637:-1
position: 842637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781890-842637:-1:exon

RALGAPB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RALGAPB
product: Ral GTPase activating protein non-catalytic beta subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_003211893.4
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: complement(join(781890..785773,787515..787663,788201..788279,790482..790590,791805..791941,792705..792827,795060..795225,797864..798022,798917..799126,799729..799881,801473..801579,803235..803422,804865..805016,807633..807815,810198..810319,812224..812356,814279..814343,816856..817003,817261..817375,818437..818604,819940..820141,827214..827430,827541..827689,830197..830375,831579..831710,834105..834291,835467..835630,840458..840660,841410..841622,842384..842637))
location: region:781890-842637:-1
so has part: feature:842384-842637:-1:exon
so has part: feature:841410-841622:-1:exon
so has part: feature:840458-840660:-1:exon
so has part: feature:835467-835630:-1:exon
so has part: feature:834105-834291:-1:exon
so has part: feature:831579-831710:-1:exon
so has part: feature:830197-830375:-1:exon
so has part: feature:827541-827689:-1:exon
so has part: feature:827214-827430:-1:exon
so has part: feature:819940-820141:-1:exon
so has part: feature:818437-818604:-1:exon
so has part: feature:817261-817375:-1:exon
so has part: feature:816856-817003:-1:exon
so has part: feature:814279-814343:-1:exon
so has part: feature:812224-812356:-1:exon
so has part: feature:810198-810319:-1:exon
so has part: feature:807633-807815:-1:exon
so has part: feature:804865-805016:-1:exon
so has part: feature:803235-803422:-1:exon
so has part: feature:801473-801579:-1:exon
so has part: feature:799729-799881:-1:exon
so has part: feature:798917-799126:-1:exon
so has part: feature:797864-798022:-1:exon
so has part: feature:795060-795225:-1:exon
so has part: feature:792705-792827:-1:exon
so has part: feature:791805-791941:-1:exon
so has part: feature:790482-790590:-1:exon
so has part: feature:788201-788279:-1:exon
so has part: feature:787515-787663:-1:exon
so has part: feature:781890-785773:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:842384-842637:-1:exon

position:842384:-1
position: 842384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:841410-841622:-1:exon

position:841410:-1
position: 841410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841622:-1
position: 841622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:840458-840660:-1:exon

position:840458:-1
position: 840458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840660:-1
position: 840660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:835467-835630:-1:exon

position:835467:-1
position: 835467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835630:-1
position: 835630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:834105-834291:-1:exon

position:834105:-1
position: 834105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834291:-1
position: 834291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:831579-831710:-1:exon

position:831579:-1
position: 831579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831710:-1
position: 831710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:830197-830375:-1:exon

position:830197:-1
position: 830197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830375:-1
position: 830375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:827541-827689:-1:exon

position:827541:-1
position: 827541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827689:-1
position: 827689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:827214-827430:-1:exon

position:827214:-1
position: 827214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827430:-1
position: 827430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:819940-820141:-1:exon

position:819940:-1
position: 819940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820141:-1
position: 820141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:818437-818604:-1:exon

position:818437:-1
position: 818437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818604:-1
position: 818604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:817261-817375:-1:exon

position:817261:-1
position: 817261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817375:-1
position: 817375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:816856-817003:-1:exon

position:816856:-1
position: 816856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817003:-1
position: 817003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:814279-814343:-1:exon

position:814279:-1
position: 814279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:814343:-1
position: 814343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:812224-812356:-1:exon

position:812224:-1
position: 812224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812356:-1
position: 812356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:810198-810319:-1:exon

position:810198:-1
position: 810198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810319:-1
position: 810319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:807633-807815:-1:exon

position:807633:-1
position: 807633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807815:-1
position: 807815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:804865-805016:-1:exon

position:804865:-1
position: 804865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805016:-1
position: 805016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:803235-803422:-1:exon

position:803235:-1
position: 803235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:803422:-1
position: 803422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:801473-801579:-1:exon

position:801473:-1
position: 801473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801579:-1
position: 801579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:799729-799881:-1:exon

position:799729:-1
position: 799729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799881:-1
position: 799881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:798917-799126:-1:exon

position:798917:-1
position: 798917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799126:-1
position: 799126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:797864-798022:-1:exon

position:797864:-1
position: 797864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798022:-1
position: 798022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:795060-795225:-1:exon

position:795060:-1
position: 795060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:795225:-1
position: 795225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:792705-792827:-1:exon

position:792705:-1
position: 792705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792827:-1
position: 792827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:791805-791941:-1:exon

position:791805:-1
position: 791805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791941:-1
position: 791941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:790482-790590:-1:exon

position:790482:-1
position: 790482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790590:-1
position: 790590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:788201-788279:-1:exon

position:788201:-1
position: 788201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788279:-1
position: 788279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:787515-787663:-1:exon

position:787515:-1
position: 787515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787663:-1
position: 787663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:781890-785773:-1:exon

position:785773:-1
position: 785773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RALGAPB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RALGAPB
product: Ral GTPase activating protein non-catalytic beta subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010722228.3
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: complement(join(781890..785773,787515..787663,788201..788279,790482..790590,791805..791941,792705..792827,795060..795225,797864..798022,798917..799126,799729..799881,801473..801579,803235..803422,804865..805016,807633..807815,810198..810331,812224..812356,814279..814343,816856..817003,817261..817375,818437..818604,819940..820141,827214..827430,827541..827689,830197..830375,831579..831710,834105..834291,835467..835630,840458..840660,841410..841622,842384..842635))
location: region:781890-842635:-1
so has part: feature:842384-842635:-1:exon
so has part: feature:841410-841622:-1:exon
so has part: feature:840458-840660:-1:exon
so has part: feature:835467-835630:-1:exon
so has part: feature:834105-834291:-1:exon
so has part: feature:831579-831710:-1:exon
so has part: feature:830197-830375:-1:exon
so has part: feature:827541-827689:-1:exon
so has part: feature:827214-827430:-1:exon
so has part: feature:819940-820141:-1:exon
so has part: feature:818437-818604:-1:exon
so has part: feature:817261-817375:-1:exon
so has part: feature:816856-817003:-1:exon
so has part: feature:814279-814343:-1:exon
so has part: feature:812224-812356:-1:exon
so has part: feature:810198-810331:-1:exon
so has part: feature:807633-807815:-1:exon
so has part: feature:804865-805016:-1:exon
so has part: feature:803235-803422:-1:exon
so has part: feature:801473-801579:-1:exon
so has part: feature:799729-799881:-1:exon
so has part: feature:798917-799126:-1:exon
so has part: feature:797864-798022:-1:exon
so has part: feature:795060-795225:-1:exon
so has part: feature:792705-792827:-1:exon
so has part: feature:791805-791941:-1:exon
so has part: feature:790482-790590:-1:exon
so has part: feature:788201-788279:-1:exon
so has part: feature:787515-787663:-1:exon
so has part: feature:781890-785773:-1:exon

position:842635:-1
position: 842635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842384-842635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:841410-841622:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:840458-840660:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835467-835630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834105-834291:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:831579-831710:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:830197-830375:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:827541-827689:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:827214-827430:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:819940-820141:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:818437-818604:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:817261-817375:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816856-817003:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:814279-814343:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:812224-812356:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:810198-810331:-1:exon

position:810331:-1
position: 810331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:807633-807815:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:804865-805016:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:803235-803422:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:801473-801579:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:799729-799881:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:798917-799126:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:797864-798022:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:795060-795225:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:792705-792827:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:791805-791941:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:790482-790590:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:788201-788279:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:787515-787663:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:781890-785773:-1:exon

RALGAPB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RALGAPB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral GTPase-activating protein subunit beta isoform X2
translation: MYSEWRSLHLVIQNDQGNTSVLHSYPESVGREVANAVVRPLGQALITSSVGSESLLKTDKEVKWTMEVVCYGLTLPLDGDTVKYCVDVYTDWIMALVLPKDSIPLPVIKEPNLYVQSILKHLQNLFVPRPDPGSSQIRLCLQVLKAVQKLARESTIMARETWEVLLLFLLQINDTLLAAPTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLRFTYGPSFPPFKIPEEDAGLIPPEMDNECIAQTWFRFLHMLSNPVDLSNPAIISSTPKFQEQFLNVSGMTQELNQYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDSAPPTPVNRLSMPQNTAINTTPPHNRRHRAVTVNKATMKTSTATTAHASKVQHQPSSTSPLSSPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDSSMTAIATQASVEFRRKGSQMSTDTMASNPLFDASEFPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSRFYMLLIQGLQIADFVCHPVLASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSKFKIYVNPTELRRASINILLSLLPLPHHFGTIKSEVVLEGKFSNDDSSTYDKPVTFLSLKLRLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIGCQMETNGGENNLFKSHSRTNSGISTASGGSMEPTTPDSERPAQALLRDYDTAAGLLIRSIHLVTQRLNSQWRQDMSISLAALELLSGLAKVKVLVDSSDQKRAISSVCSYIVFQCSRPAPLHSRDLHSVIVAAFQCLCVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKSSEQEVKYKGDKEPNPASMRVKDAAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTINKHSFRYFVLDNSVILAMLEQPLGNEQNDSFPSVTVLIRGTSGRFAWAQQLCLLPRGAKANQKTFVPEPRPAPKNDVGLKYSVKHRPFPEEVDKIPFVKADLSIPDLHEIVNEELEERHEKLRNGMAQQIIFETSIDQKSEDEWRKKSFPDPITECKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDSTLPGFFDDLGYLDLLPCRPFDTVFIFYMKAGQKTSQEILKNMESSRIVQPHFLEFLLSLGWSVDVGKHPGWTGHVSTSWSINSCSDEEGPEQDDVIISEDVGASIFNGQKKVLYYADALTEIAFVVPSPVESLTDSLESNVSDQESDSNMDLLPGILKQPSLTLELFPNHTDNLNPSQRLSPTSRSKRVPQGRTIPPMGPETKVYVVWVERYDDIENFPLPDLVSETSTGVETTANSSTSLRSTIPEKEVPVIFIHPLNTGLFRIKLQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVINICRRKRLESDSYNPPHVRRKQKIADIVNKYRNRQLEPEFYTSLFQEVGLKNCNP
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: complement(join(785580..785773,787515..787663,788201..788279,790482..790590,791805..791941,792705..792827,795060..795225,797864..798022,798917..799126,799729..799881,801473..801579,803235..803422,804865..805016,807633..807815,810198..810319,812224..812356,814279..814343,816856..817003,817261..817375,818437..818604,819940..820141,827214..827430,827541..827689,830197..830375,831579..831710,834105..834291,835467..835630,840458..840660,841410..841592))
location: region:785580-841592:-1
so has part: feature:841410-841592:-1:exon
so has part: feature:840458-840660:-1:exon
so has part: feature:835467-835630:-1:exon
so has part: feature:834105-834291:-1:exon
so has part: feature:831579-831710:-1:exon
so has part: feature:830197-830375:-1:exon
so has part: feature:827541-827689:-1:exon
so has part: feature:827214-827430:-1:exon
so has part: feature:819940-820141:-1:exon
so has part: feature:818437-818604:-1:exon
so has part: feature:817261-817375:-1:exon
so has part: feature:816856-817003:-1:exon
so has part: feature:814279-814343:-1:exon
so has part: feature:812224-812356:-1:exon
so has part: feature:810198-810319:-1:exon
so has part: feature:807633-807815:-1:exon
so has part: feature:804865-805016:-1:exon
so has part: feature:803235-803422:-1:exon
so has part: feature:801473-801579:-1:exon
so has part: feature:799729-799881:-1:exon
so has part: feature:798917-799126:-1:exon
so has part: feature:797864-798022:-1:exon
so has part: feature:795060-795225:-1:exon
so has part: feature:792705-792827:-1:exon
so has part: feature:791805-791941:-1:exon
so has part: feature:790482-790590:-1:exon
so has part: feature:788201-788279:-1:exon
so has part: feature:787515-787663:-1:exon
so has part: feature:785580-785773:-1:exon

XP_003211941.1
type: Protein
SIO_000068: ncbiprotein

position:785580:-1
position: 785580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841592:-1
position: 841592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:841410-841592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:840458-840660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835467-835630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:834105-834291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831579-831710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830197-830375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827541-827689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:827214-827430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819940-820141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:818437-818604:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:817261-817375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816856-817003:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:814279-814343:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:812224-812356:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:810198-810319:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:807633-807815:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:804865-805016:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:803235-803422:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:801473-801579:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799729-799881:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798917-799126:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:797864-798022:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:795060-795225:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:792705-792827:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:791805-791941:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790482-790590:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:788201-788279:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:787515-787663:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:785580-785773:-1:exon

RALGAPB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RALGAPB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral GTPase-activating protein subunit beta isoform X1
translation: MYSEWRSLHLVIQNDQGNTSVLHSYPESVGREVANAVVRPLGQALITSSVGSESLLKTDKEVKWTMEVVCYGLTLPLDGDTVKYCVDVYTDWIMALVLPKDSIPLPVIKEPNLYVQSILKHLQNLFVPRPDPGSSQIRLCLQVLKAVQKLARESTIMARETWEVLLLFLLQINDTLLAAPTVQGGIAENLAEKLIGVLFEVWLLACTRCFPTPPYWKTAKEMVANWRHHPAVVEQWSKVICALTSRLLRFTYGPSFPPFKIPEEDAGLIPPEMDNECIAQTWFRFLHMLSNPVDLSNPAIISSTPKFQEQFLNVSGMTQELNQYPCLKHLPQIFFRAMRGISCLVDAFLGISRPRSDSAPPTPVNRLSMPQNTAINTTPPHNRRHRAVTVNKATMKTSTATTAHASKVQHQPSSTSPLSSPNQTSSEPRPLPAPRRPKVNSILNLFGSWLFDAAFVHCKLHNGINRDSSMTAIATQASVEFRRKGSQMSTDTMASNPLFDASEFPDNYEAGRAEACGTLCRIFCSKKTGEEILPAYLSRFYMLLIQGLQIADFVCHPVLASVILNSPPLFCCDLKGIDVVVPYFISALETILPDRELSKFKIYVNPTELRRASINILLSLLPLPHHFGTIKSEVVLEGKFSNDDSSTYDKPVTFLSLKLRLVNILIGALQTETDPNNTQMILGAMLNIVQDSALLEAIGCQMETNGGENNLFKSHSRTNSGISTASGGSMEPTTPDSERPAQALLRDYALNTDTAAGLLIRSIHLVTQRLNSQWRQDMSISLAALELLSGLAKVKVLVDSSDQKRAISSVCSYIVFQCSRPAPLHSRDLHSVIVAAFQCLCVWLTEHPDMLDEKDCLKEVLEIVELGISGSKSKSSEQEVKYKGDKEPNPASMRVKDAAEATLTCIMQLLGAFPSPSGPASPCSLVNETTLIKYSRLPTINKHSFRYFVLDNSVILAMLEQPLGNEQNDSFPSVTVLIRGTSGRFAWAQQLCLLPRGAKANQKTFVPEPRPAPKNDVGLKYSVKHRPFPEEVDKIPFVKADLSIPDLHEIVNEELEERHEKLRNGMAQQIIFETSIDQKSEDEWRKKSFPDPITECKPPPPAQEFQTARLFLSHFGFLSLEALKEPANSRLPPHLIALDSTLPGFFDDLGYLDLLPCRPFDTVFIFYMKAGQKTSQEILKNMESSRIVQPHFLEFLLSLGWSVDVGKHPGWTGHVSTSWSINSCSDEEGPEQDDVIISEDVGASIFNGQKKVLYYADALTEIAFVVPSPVESLTDSLESNVSDQESDSNMDLLPGILKQPSLTLELFPNHTDNLNPSQRLSPTSRSKRVPQGRTIPPMGPETKVYVVWVERYDDIENFPLPDLVSETSTGVETTANSSTSLRSTIPEKEVPVIFIHPLNTGLFRIKLQGATGKFNMVIPLVDGMIVSRRALGFLVRQTVINICRRKRLESDSYNPPHVRRKQKIADIVNKYRNRQLEPEFYTSLFQEVGLKNCNP
SIO_010081: RALGAPB
subclass of: SO_0000673
so part of: RALGAPB
location: complement(join(785580..785773,787515..787663,788201..788279,790482..790590,791805..791941,792705..792827,795060..795225,797864..798022,798917..799126,799729..799881,801473..801579,803235..803422,804865..805016,807633..807815,810198..810331,812224..812356,814279..814343,816856..817003,817261..817375,818437..818604,819940..820141,827214..827430,827541..827689,830197..830375,831579..831710,834105..834291,835467..835630,840458..840660,841410..841592))
location: region:785580-841592:-1
so has part: feature:841410-841592:-1:exon
so has part: feature:840458-840660:-1:exon
so has part: feature:835467-835630:-1:exon
so has part: feature:834105-834291:-1:exon
so has part: feature:831579-831710:-1:exon
so has part: feature:830197-830375:-1:exon
so has part: feature:827541-827689:-1:exon
so has part: feature:827214-827430:-1:exon
so has part: feature:819940-820141:-1:exon
so has part: feature:818437-818604:-1:exon
so has part: feature:817261-817375:-1:exon
so has part: feature:816856-817003:-1:exon
so has part: feature:814279-814343:-1:exon
so has part: feature:812224-812356:-1:exon
so has part: feature:810198-810331:-1:exon
so has part: feature:807633-807815:-1:exon
so has part: feature:804865-805016:-1:exon
so has part: feature:803235-803422:-1:exon
so has part: feature:801473-801579:-1:exon
so has part: feature:799729-799881:-1:exon
so has part: feature:798917-799126:-1:exon
so has part: feature:797864-798022:-1:exon
so has part: feature:795060-795225:-1:exon
so has part: feature:792705-792827:-1:exon
so has part: feature:791805-791941:-1:exon
so has part: feature:790482-790590:-1:exon
so has part: feature:788201-788279:-1:exon
so has part: feature:787515-787663:-1:exon
so has part: feature:785580-785773:-1:exon

XP_010720530.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:841410-841592:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:840458-840660:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:835467-835630:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:834105-834291:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:831579-831710:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:830197-830375:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827541-827689:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:827214-827430:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:819940-820141:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:818437-818604:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:817261-817375:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816856-817003:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:814279-814343:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:812224-812356:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:810198-810331:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:807633-807815:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:804865-805016:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:803235-803422:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:801473-801579:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:799729-799881:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:798917-799126:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:797864-798022:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:795060-795225:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:792705-792827:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:791805-791941:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:790482-790590:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:788201-788279:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:787515-787663:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:785580-785773:-1:exon

NDRG3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NDRG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 880914..913252
location: region:880914-913252:1
so has part: feature:880914-913252:1:exon
subclass of: SO_0000010

100550158
type: Gene
SIO_000068: ncbigene

position:880914:1
position: 880914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913252:1
position: 913252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880914-913252:1:exon

NDRG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NDRG3
product: NDRG family member 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019622132.2
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: join(880914..881017,882268..882373,884945..884980,900453..900558,901234..901354,901846..901908,902245..902305,903457..903543,904060..904116,905277..905380,905759..905824,907338..907389,908708..908755,909370..909405,909498..909549,911174..911212,911730..913252)
location: region:880914-913252:1
so has part: feature:880914-881017:1:exon
so has part: feature:882268-882373:1:exon
so has part: feature:884945-884980:1:exon
so has part: feature:900453-900558:1:exon
so has part: feature:901234-901354:1:exon
so has part: feature:901846-901908:1:exon
so has part: feature:902245-902305:1:exon
so has part: feature:903457-903543:1:exon
so has part: feature:904060-904116:1:exon
so has part: feature:905277-905380:1:exon
so has part: feature:905759-905824:1:exon
so has part: feature:907338-907389:1:exon
so has part: feature:908708-908755:1:exon
so has part: feature:909370-909405:1:exon
so has part: feature:909498-909549:1:exon
so has part: feature:911174-911212:1:exon
so has part: feature:911730-913252:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880914-881017:1:exon

position:881017:1
position: 881017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882268-882373:1:exon

position:882268:1
position: 882268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882373:1
position: 882373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884945-884980:1:exon

position:884945:1
position: 884945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884980:1
position: 884980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:900453-900558:1:exon

position:900453:1
position: 900453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900558:1
position: 900558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:901234-901354:1:exon

position:901234:1
position: 901234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901354:1
position: 901354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:901846-901908:1:exon

position:901846:1
position: 901846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901908:1
position: 901908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:902245-902305:1:exon

position:902245:1
position: 902245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902305:1
position: 902305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:903457-903543:1:exon

position:903457:1
position: 903457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903543:1
position: 903543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:904060-904116:1:exon

position:904060:1
position: 904060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:904116:1
position: 904116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:905277-905380:1:exon

position:905277:1
position: 905277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905380:1
position: 905380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:905759-905824:1:exon

position:905759:1
position: 905759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:905824:1
position: 905824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:907338-907389:1:exon

position:907338:1
position: 907338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907389:1
position: 907389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:908708-908755:1:exon

position:908708:1
position: 908708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908755:1
position: 908755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:909370-909405:1:exon

position:909370:1
position: 909370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909405:1
position: 909405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:909498-909549:1:exon

position:909498:1
position: 909498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909549:1
position: 909549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:911174-911212:1:exon

position:911174:1
position: 911174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911212:1
position: 911212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:911730-913252:1:exon

position:911730:1
position: 911730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDRG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NDRG3
product: NDRG family member 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010722229.3
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: join(881131..881238,882268..882373,884945..884980,900453..900558,901234..901354,901846..901908,902245..902305,903457..903543,904060..904116,905277..905380,905759..905824,907338..907389,908708..908755,909370..909405,909498..909549,911174..911212,911730..913252)
location: region:881131-913252:1
so has part: feature:881131-881238:1:exon
so has part: feature:882268-882373:1:exon
so has part: feature:884945-884980:1:exon
so has part: feature:900453-900558:1:exon
so has part: feature:901234-901354:1:exon
so has part: feature:901846-901908:1:exon
so has part: feature:902245-902305:1:exon
so has part: feature:903457-903543:1:exon
so has part: feature:904060-904116:1:exon
so has part: feature:905277-905380:1:exon
so has part: feature:905759-905824:1:exon
so has part: feature:907338-907389:1:exon
so has part: feature:908708-908755:1:exon
so has part: feature:909370-909405:1:exon
so has part: feature:909498-909549:1:exon
so has part: feature:911174-911212:1:exon
so has part: feature:911730-913252:1:exon

position:881131:1
position: 881131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881131-881238:1:exon

position:881238:1
position: 881238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882268-882373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:884945-884980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900453-900558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901234-901354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901846-901908:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902245-902305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903457-903543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:904060-904116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905277-905380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:905759-905824:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:907338-907389:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:908708-908755:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909370-909405:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:909498-909549:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:911174-911212:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:911730-913252:1:exon

NDRG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NDRG3
product: NDRG family member 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_010722230.3
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: join(881135..881238,882268..882373,884945..884980,900453..900558,901234..901354,901846..901908,902245..902305,903457..903543,904060..904116,905277..905380,905759..905824,907338..907389,908708..908755,909370..909405,909498..909549,911730..913252)
location: region:881135-913252:1
so has part: feature:881135-881238:1:exon
so has part: feature:882268-882373:1:exon
so has part: feature:884945-884980:1:exon
so has part: feature:900453-900558:1:exon
so has part: feature:901234-901354:1:exon
so has part: feature:901846-901908:1:exon
so has part: feature:902245-902305:1:exon
so has part: feature:903457-903543:1:exon
so has part: feature:904060-904116:1:exon
so has part: feature:905277-905380:1:exon
so has part: feature:905759-905824:1:exon
so has part: feature:907338-907389:1:exon
so has part: feature:908708-908755:1:exon
so has part: feature:909370-909405:1:exon
so has part: feature:909498-909549:1:exon
so has part: feature:911730-913252:1:exon

position:881135:1
position: 881135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:881135-881238:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:882268-882373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:884945-884980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:900453-900558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901234-901354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901846-901908:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902245-902305:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:903457-903543:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:904060-904116:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905277-905380:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:905759-905824:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:907338-907389:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:908708-908755:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909370-909405:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:909498-909549:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:911730-913252:1:exon

NDRG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NDRG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG3 isoform X1
translation: MDELQDVQLTEIKPLLNDKNAARNFQDFDCQEHDIETAFGVVHVTMRGTPKGNRPVILTYHDIGLNHKSCFNAFFNFEDMQEITHHFAVCHVDAPGQQEGAPPFPSGYQYPTMDELAEMLPAVLTHLNLKSFIGIGLGAGAYVLSRCALSHPDLVEGLVLINVDPCAKGWIDWAASKFSGWTTNIVDIVLAHHFGHEELQANLDLIQTYRLHIAQDINQDNLQLFLTSYNSRRDLEIERPVIGVNENTAKTLKCPALLVVGDNSPAVEAVVECNSRLDPTKTTLLKMADCGGLPQVVQPGKLTEAFKYFVQGMGYIPYVQLSHLSTESVPAASMTRLMRSRTHSSSSVGSGESIRSRSHASNHGEGSAGTPDGIDLQDAPQTMEVSC
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: join(882317..882373,884945..884980,900453..900558,901234..901354,901846..901908,902245..902305,903457..903543,904060..904116,905277..905380,905759..905824,907338..907389,908708..908755,909370..909405,909498..909549,911174..911212,911730..911908)
location: region:882317-911908:1
so has part: feature:882317-882373:1:exon
so has part: feature:884945-884980:1:exon
so has part: feature:900453-900558:1:exon
so has part: feature:901234-901354:1:exon
so has part: feature:901846-901908:1:exon
so has part: feature:902245-902305:1:exon
so has part: feature:903457-903543:1:exon
so has part: feature:904060-904116:1:exon
so has part: feature:905277-905380:1:exon
so has part: feature:905759-905824:1:exon
so has part: feature:907338-907389:1:exon
so has part: feature:908708-908755:1:exon
so has part: feature:909370-909405:1:exon
so has part: feature:909498-909549:1:exon
so has part: feature:911174-911212:1:exon
so has part: feature:911730-911908:1:exon

XP_019477677.1
type: Protein
SIO_000068: ncbiprotein

position:882317:1
position: 882317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911908:1
position: 911908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882317-882373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884945-884980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900453-900558:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901234-901354:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901846-901908:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902245-902305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903457-903543:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:904060-904116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905277-905380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905759-905824:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:907338-907389:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:908708-908755:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909370-909405:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909498-909549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:911174-911212:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:911730-911908:1:exon

NDRG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NDRG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG3 isoform X1
translation: MDELQDVQLTEIKPLLNDKNAARNFQDFDCQEHDIETAFGVVHVTMRGTPKGNRPVILTYHDIGLNHKSCFNAFFNFEDMQEITHHFAVCHVDAPGQQEGAPPFPSGYQYPTMDELAEMLPAVLTHLNLKSFIGIGLGAGAYVLSRCALSHPDLVEGLVLINVDPCAKGWIDWAASKFSGWTTNIVDIVLAHHFGHEELQANLDLIQTYRLHIAQDINQDNLQLFLTSYNSRRDLEIERPVIGVNENTAKTLKCPALLVVGDNSPAVEAVVECNSRLDPTKTTLLKMADCGGLPQVVQPGKLTEAFKYFVQGMGYIPYVQLSHLSTESVPAASMTRLMRSRTHSSSSVGSGESIRSRSHASNHGEGSAGTPDGIDLQDAPQTMEVSC
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: join(882317..882373,884945..884980,900453..900558,901234..901354,901846..901908,902245..902305,903457..903543,904060..904116,905277..905380,905759..905824,907338..907389,908708..908755,909370..909405,909498..909549,911174..911212,911730..911908)
location: region:882317-911908:1
so has part: feature:882317-882373:1:exon
so has part: feature:884945-884980:1:exon
so has part: feature:900453-900558:1:exon
so has part: feature:901234-901354:1:exon
so has part: feature:901846-901908:1:exon
so has part: feature:902245-902305:1:exon
so has part: feature:903457-903543:1:exon
so has part: feature:904060-904116:1:exon
so has part: feature:905277-905380:1:exon
so has part: feature:905759-905824:1:exon
so has part: feature:907338-907389:1:exon
so has part: feature:908708-908755:1:exon
so has part: feature:909370-909405:1:exon
so has part: feature:909498-909549:1:exon
so has part: feature:911174-911212:1:exon
so has part: feature:911730-911908:1:exon

XP_010720531.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:882317-882373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884945-884980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900453-900558:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901234-901354:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901846-901908:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902245-902305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903457-903543:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:904060-904116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905277-905380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905759-905824:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:907338-907389:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:908708-908755:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909370-909405:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909498-909549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:911174-911212:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:911730-911908:1:exon

NDRG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NDRG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG3 isoform X2
translation: MDELQDVQLTEIKPLLNDKNAARNFQDFDCQEHDIETAFGVVHVTMRGTPKGNRPVILTYHDIGLNHKSCFNAFFNFEDMQEITHHFAVCHVDAPGQQEGAPPFPSGYQYPTMDELAEMLPAVLTHLNLKSFIGIGLGAGAYVLSRCALSHPDLVEGLVLINVDPCAKGWIDWAASKFSGWTTNIVDIVLAHHFGHEELQANLDLIQTYRLHIAQDINQDNLQLFLTSYNSRRDLEIERPVIGVNENTAKTLKCPALLVVGDNSPAVEAVVECNSRLDPTKTTLLKMADCGGLPQVVQPGKLTEAFKYFVQGMGYMPAASMTRLMRSRTHSSSSVGSGESIRSRSHASNHGEGSAGTPDGIDLQDAPQTMEVSC
SIO_010081: NDRG3
subclass of: SO_0000673
so part of: NDRG3
location: join(882317..882373,884945..884980,900453..900558,901234..901354,901846..901908,902245..902305,903457..903543,904060..904116,905277..905380,905759..905824,907338..907389,908708..908755,909370..909405,909498..909549,911730..911908)
location: region:882317-911908:1
so has part: feature:882317-882373:1:exon
so has part: feature:884945-884980:1:exon
so has part: feature:900453-900558:1:exon
so has part: feature:901234-901354:1:exon
so has part: feature:901846-901908:1:exon
so has part: feature:902245-902305:1:exon
so has part: feature:903457-903543:1:exon
so has part: feature:904060-904116:1:exon
so has part: feature:905277-905380:1:exon
so has part: feature:905759-905824:1:exon
so has part: feature:907338-907389:1:exon
so has part: feature:908708-908755:1:exon
so has part: feature:909370-909405:1:exon
so has part: feature:909498-909549:1:exon
so has part: feature:911730-911908:1:exon

XP_010720532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:882317-882373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:884945-884980:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:900453-900558:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901234-901354:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901846-901908:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902245-902305:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:903457-903543:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:904060-904116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:905277-905380:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:905759-905824:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:907338-907389:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:908708-908755:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:909370-909405:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:909498-909549:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:911730-911908:1:exon

SLA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 913344..917911
location: region:913344-917911:1
so has part: feature:913344-917911:1:exon
subclass of: SO_0000010

100539323
type: Gene
SIO_000068: ncbigene

position:913344:1
position: 913344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917911:1
position: 917911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913344-917911:1:exon

SLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLA2
product: Src like adaptor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010722231.3
SIO_010081: SLA2
subclass of: SO_0000673
so part of: SLA2
location: join(913344..913554,913644..913831,915423..915669,915769..915855,916128..916231,916941..917090,917166..917292,917370..917911)
location: region:913344-917911:1
so has part: feature:913344-913554:1:exon
so has part: feature:913644-913831:1:exon
so has part: feature:915423-915669:1:exon
so has part: feature:915769-915855:1:exon
so has part: feature:916128-916231:1:exon
so has part: feature:916941-917090:1:exon
so has part: feature:917166-917292:1:exon
so has part: feature:917370-917911:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:913344-913554:1:exon

position:913554:1
position: 913554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:913644-913831:1:exon

position:913644:1
position: 913644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913831:1
position: 913831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:915423-915669:1:exon

position:915423:1
position: 915423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915669:1
position: 915669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:915769-915855:1:exon

position:915769:1
position: 915769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915855:1
position: 915855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:916128-916231:1:exon

position:916128:1
position: 916128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916231:1
position: 916231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:916941-917090:1:exon

position:916941:1
position: 916941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917090:1
position: 917090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:917166-917292:1:exon

position:917166:1
position: 917166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917292:1
position: 917292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:917370-917911:1:exon

position:917370:1
position: 917370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLA2
product: Src like adaptor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 142 samples with support for all annotated introns
transcript id: XM_003211908.4
SIO_010081: SLA2
subclass of: SO_0000673
so part of: SLA2
location: join(915175..915669,915769..915855,916128..916231,916941..917090,917166..917292,917370..917911)
location: region:915175-917911:1
so has part: feature:915175-915669:1:exon
so has part: feature:915769-915855:1:exon
so has part: feature:916128-916231:1:exon
so has part: feature:916941-917090:1:exon
so has part: feature:917166-917292:1:exon
so has part: feature:917370-917911:1:exon

position:915175:1
position: 915175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915175-915669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:915769-915855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916128-916231:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916941-917090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917166-917292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917370-917911:1:exon

SLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: src-like-adapter 2 isoform X1
translation: MRAPRCVWLLVPAPLPLPRTRPGTCRTEPRPSLPAGGIHGRGSGLRADPAVRRGMGILPSREKPLSAAPLAAVPAPSPLPTQAAPGGFQELALGEFPSGAGATAVLRMGEQLRVLSEDGEWWLVASQVSGKECLIPSSCVAKVRHRWLYEGVSREKAEELLLQPGNHSGAFLIRESQTRRGGFSLSVRRTELASWDAVTHYRIHRLENGWLYISPRLTFPSLHDLVDHYSECGEGLCCTLREPCVMEVAKAAPALVRPAVVKKPTLNWDKIDSSVLLSEAVPPLGEGEEDSPISLGLREAISSYLLLTDGVAPETGPAGKGVKSS
SIO_010081: SLA2
subclass of: SO_0000673
so part of: SLA2
location: join(915320..915669,915769..915855,916128..916231,916941..917090,917166..917292,917370..917529)
location: region:915320-917529:1
so has part: feature:915320-915669:1:exon
so has part: feature:915769-915855:1:exon
so has part: feature:916128-916231:1:exon
so has part: feature:916941-917090:1:exon
so has part: feature:917166-917292:1:exon
so has part: feature:917370-917529:1:exon

XP_003211956.2
type: Protein
SIO_000068: ncbiprotein

position:915320:1
position: 915320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917529:1
position: 917529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915320-915669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:915769-915855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916128-916231:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916941-917090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917166-917292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917370-917529:1:exon

SLA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: src-like-adapter 2 isoform X2
translation: MGILPSREKPLSAAPLAAVPAPSPLPTQAAPGGFQELALGEFPSGAGATAVLRMGEQLRVLSEDGEWWLVASQVSGKECLIPSSCVAKVRHRWLYEGVSREKAEELLLQPGNHSGAFLIRESQTRRGGFSLSVRRTELASWDAVTHYRIHRLENGWLYISPRLTFPSLHDLVDHYSECGEGLCCTLREPCVMEVAKAAPALVRPAVVKKPTLNWDKIDSSVLLSEAVPPLGEGEEDSPISLGLREAISSYLLLTDGVAPETGPAGKGVKSS
SIO_010081: SLA2
subclass of: SO_0000673
so part of: SLA2
location: join(915482..915669,915769..915855,916128..916231,916941..917090,917166..917292,917370..917529)
location: region:915482-917529:1
so has part: feature:915482-915669:1:exon
so has part: feature:915769-915855:1:exon
so has part: feature:916128-916231:1:exon
so has part: feature:916941-917090:1:exon
so has part: feature:917166-917292:1:exon
so has part: feature:917370-917529:1:exon

XP_010720533.1
type: Protein
SIO_000068: ncbiprotein

position:915482:1
position: 915482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915482-915669:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:915769-915855:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:916128-916231:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:916941-917090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:917166-917292:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917370-917529:1:exon

PHF20
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PHF20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(918540..982335)
location: region:918540-982335:-1
so has part: feature:918540-982335:-1:exon
subclass of: SO_0000010

100539478
type: Gene
SIO_000068: ncbigene

position:918540:-1
position: 918540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982335:-1
position: 982335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918540-982335:-1:exon

PHF20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PHF20
product: PHD finger protein 20
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_010722232.3
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: complement(join(918540..921075,922982..923165,925599..925998,928294..928489,932359..932458,937657..937826,938535..938696,941583..941680,952102..952380,960287..960460,961300..961476,962039..962146,962512..962899,965789..965868,966616..966700,966917..967088,972900..973014,975973..976101,977735..977788,982289..982335))
location: region:918540-982335:-1
so has part: feature:982289-982335:-1:exon
so has part: feature:977735-977788:-1:exon
so has part: feature:975973-976101:-1:exon
so has part: feature:972900-973014:-1:exon
so has part: feature:966917-967088:-1:exon
so has part: feature:966616-966700:-1:exon
so has part: feature:965789-965868:-1:exon
so has part: feature:962512-962899:-1:exon
so has part: feature:962039-962146:-1:exon
so has part: feature:961300-961476:-1:exon
so has part: feature:960287-960460:-1:exon
so has part: feature:952102-952380:-1:exon
so has part: feature:941583-941680:-1:exon
so has part: feature:938535-938696:-1:exon
so has part: feature:937657-937826:-1:exon
so has part: feature:932359-932458:-1:exon
so has part: feature:928294-928489:-1:exon
so has part: feature:925599-925998:-1:exon
so has part: feature:922982-923165:-1:exon
so has part: feature:918540-921075:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982289-982335:-1:exon

position:982289:-1
position: 982289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:977735-977788:-1:exon

position:977735:-1
position: 977735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977788:-1
position: 977788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:975973-976101:-1:exon

position:975973:-1
position: 975973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976101:-1
position: 976101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:972900-973014:-1:exon

position:972900:-1
position: 972900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:973014:-1
position: 973014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:966917-967088:-1:exon

position:966917:-1
position: 966917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967088:-1
position: 967088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:966616-966700:-1:exon

position:966616:-1
position: 966616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:966700:-1
position: 966700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:965789-965868:-1:exon

position:965789:-1
position: 965789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:965868:-1
position: 965868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:962512-962899:-1:exon

position:962512:-1
position: 962512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962899:-1
position: 962899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:962039-962146:-1:exon

position:962039:-1
position: 962039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962146:-1
position: 962146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:961300-961476:-1:exon

position:961300:-1
position: 961300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961476:-1
position: 961476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:960287-960460:-1:exon

position:960287:-1
position: 960287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:960460:-1
position: 960460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:952102-952380:-1:exon

position:952102:-1
position: 952102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952380:-1
position: 952380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:941583-941680:-1:exon

position:941583:-1
position: 941583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941680:-1
position: 941680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:938535-938696:-1:exon

position:938535:-1
position: 938535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938696:-1
position: 938696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:937657-937826:-1:exon

position:937657:-1
position: 937657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937826:-1
position: 937826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:932359-932458:-1:exon

position:932359:-1
position: 932359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:932458:-1
position: 932458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:928294-928489:-1:exon

position:928294:-1
position: 928294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:928489:-1
position: 928489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:925599-925998:-1:exon

position:925599:-1
position: 925599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925998:-1
position: 925998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:922982-923165:-1:exon

position:922982:-1
position: 922982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923165:-1
position: 923165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:918540-921075:-1:exon

position:921075:-1
position: 921075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHF20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PHF20
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: PHD finger protein 20
translation: MTKHPPNRRGINFEVGAQLEARDRLKNWYPAHIEEIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPLEKIQLRKEGLHEEEGCAGFHINDQVLACWSDCRFYPAKVTSVNKDGTYTVKFYDGVVQTVKNIHVKAFSKDQNIVGNAKPKERGNEIPSSPEKREKFKEQRKATGNAKKDKDEKTLKTEKRVKQPDKEGKLIVVSEKGKVSEKNISKNGKEDKENISENDMEYSIDTQIEKKPENDNVKSPQENVKETKRKRGRPPITPPTEPGSQTLQPIALELRRRKIPKGGEVPSKRPRIDRNLSQEKLKNSSDNHEKDQIRRRSSRLSSGVSHEILNADHVTTSTEVQTLKDTVSNPKESEKVQLEVPVESDQSFGEQASPGNTSHSTVLSTDASLQEGNIEDTESSSVAVRTEEPAAATVTKPFRRSDFLASKKAATVDQDHKFKCKFVDCSKSFRKAKLLHYHMKYFHGVDKSAESQQNPVKRHIQTRASLASEKANQERSKRGRSSAGSLSAKEHEKNKERKSKDYGRSKAKKKXKKKKRTKPEYSASEENTDISQELSPEKSVVTKSISSNKLSAHPSTLLQCSESGHHRGKSKANEEDTMSESSMDSLLWSDDDCSQDVDVTTNPDEEAEESDFEIVRCICEVKEENDFMIQCEECLCWQHGVCMGLLEDNVPEKYTCYICQDPPGQRSSLKYWYEKEWLSNGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILKNKEHPDLKLWCHPWKHITVDEKIHTKHIIHIEENCCKEETTSYRTWNGTAEKPSAIPSVEESYITSEHCYQKPRAYYPAIEQRLVVETRGAAMDEGVNRIRENGDDVLSERLGWNLDREICKMENESKHNYSKVREPASKKASPEEAIEMKLLEKDKEGVVNSQLQWQLNLLAHVESLQDEVIHRMDFIEKELDVLESWLDYTGELEPPEPLARLPQLKHCIKQLITDLSKVQQIALCCST
SIO_010081: PHF20
subclass of: SO_0000673
so part of: PHF20
location: complement(join(920933..921075,922982..923165,925599..925998,928294..928489,932359..932458,937657..937826,938535..938696,941583..941680,952102..952380,960287..960460,961300..961476,962039..962146,962512..962899,965789..965868,966616..966700,966917..967088,972900..972982))
location: region:920933-972982:-1
so has part: feature:972900-972982:-1:exon
so has part: feature:966917-967088:-1:exon
so has part: feature:966616-966700:-1:exon
so has part: feature:965789-965868:-1:exon
so has part: feature:962512-962899:-1:exon
so has part: feature:962039-962146:-1:exon
so has part: feature:961300-961476:-1:exon
so has part: feature:960287-960460:-1:exon
so has part: feature:952102-952380:-1:exon
so has part: feature:941583-941680:-1:exon
so has part: feature:938535-938696:-1:exon
so has part: feature:937657-937826:-1:exon
so has part: feature:932359-932458:-1:exon
so has part: feature:928294-928489:-1:exon
so has part: feature:925599-925998:-1:exon
so has part: feature:922982-923165:-1:exon
so has part: feature:920933-921075:-1:exon

XP_010720534.1
type: Protein
SIO_000068: ncbiprotein

position:920933:-1
position: 920933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972982:-1
position: 972982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972900-972982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:966917-967088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:966616-966700:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:965789-965868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962512-962899:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:962039-962146:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:961300-961476:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960287-960460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952102-952380:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:941583-941680:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:938535-938696:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:937657-937826:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:932359-932458:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:928294-928489:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:925599-925998:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:922982-923165:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:920933-921075:-1:exon

LOC100539630
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100539630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(988638..1012055)
location: region:988638-1012055:-1
so has part: feature:988638-1012055:-1:exon
subclass of: SO_0000010

100539630
type: Gene
SIO_000068: ncbigene

position:988638:-1
position: 988638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1012055:-1
position: 1012055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:988638-1012055:-1:exon

LOC100539630
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100539630
product: rho GTPase-activating protein 39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556592.1
SIO_010081: LOC100539630
subclass of: SO_0000673
so part of: LOC100539630
location: complement(join(988638..991263,991677..991846,992291..992382,993679..993878,995069..995142,999127..999216,1000041..1000587,1002613..1003921,1009892..1010351,1011968..1012055))
location: region:988638-1012055:-1
so has part: feature:1011968-1012055:-1:exon
so has part: feature:1009892-1010351:-1:exon
so has part: feature:1002613-1003921:-1:exon
so has part: feature:1000041-1000587:-1:exon
so has part: feature:999127-999216:-1:exon
so has part: feature:995069-995142:-1:exon
so has part: feature:993679-993878:-1:exon
so has part: feature:992291-992382:-1:exon
so has part: feature:991677-991846:-1:exon
so has part: feature:988638-991263:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1011968-1012055:-1:exon

position:1011968:-1
position: 1011968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009892-1010351:-1:exon

position:1009892:-1
position: 1009892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010351:-1
position: 1010351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002613-1003921:-1:exon

position:1002613:-1
position: 1002613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003921:-1
position: 1003921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1000041-1000587:-1:exon

position:1000041:-1
position: 1000041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1000587:-1
position: 1000587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:999127-999216:-1:exon

position:999127:-1
position: 999127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999216:-1
position: 999216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:995069-995142:-1:exon

position:995069:-1
position: 995069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995142:-1
position: 995142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:993679-993878:-1:exon

position:993679:-1
position: 993679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993878:-1
position: 993878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:992291-992382:-1:exon

position:992291:-1
position: 992291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992382:-1
position: 992382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:991677-991846:-1:exon

position:991677:-1
position: 991677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991846:-1
position: 991846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:988638-991263:-1:exon

position:991263:-1
position: 991263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100539630
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100539630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 39-like
translation: MAAPQPTSRSACESERLELGPICKLRGLETLLPILDCLLAHTNVPLVPHSSDWVEIIEPRSQERMYVNLTTGECGWEPPPNLKVRQSDQKQWWELFDHNNNRFYYYNAITRQTVWHRPQGCDIVPLAQLQAMKHSSQPDCRGRQHRGSSGSEGRSTPIPTALLQEMERSKGDCATDKRPDTGRETPTHWQPLPGTKAAMLVKVNSLKQVPGSSNSSLHLQCAPETNSQKSLPKPAIYAQPQSVSQSPGATKQTPPGEGKQSMQIKKTENGGFCLVLMNGPASQTPPRSQTGTPQPASPKYASPAPIYDEPSLESPIYDEPPVDMDTESIGVSGMSPPRSPSNSLKKQLQPTKLLQHPSVQQQQAAKKHARNPSSTEYSPAGREYIKHMVNVDQSSKVSHSATATADGSTKLPGQLASKDSFKQSWRILEANVLKSIEAHHSRQNSLQTQEYPTAISHQDSGYSTGPSPSLRKRKGRRQGAGQGRPGSVGSSSELTALNDKLIAEMRAVVGRSAACRGSKASLDAQSLESGIPAESGKVRFQSDHLKKCINRSSRDDISASSRSLYRQGLESRGSFPSDMAALQDTVRQKRTFEKVDSLEKNVTSRTSLASSGATRRSSQPGAIELDPKQESSGQPGSCMGYHFSYNTLRKPISQSSMADWASKNLNMHTQGIFRRRISISNMLSWNGGSIKKPMLITSSRTIKKEACEMFKLVQSYMGDRQTRMDRNHVALVTVTKCWSMQGLRDELYIQLIRQTTDNTCYRSLAWGWELMAISLAFFSPSPKFQSYLEGYIYRHLDSDENIAQRIKELVDLKNKKNSKSRKKRKQNTEEEGLPISTYAKYCYRKLQKVAVTGGKKGLRKPTVEEITHARNAIVTPSLFGSSLEEIMLRQQDMYPGHKLPWVQTQLSQQVLALGGEQTEGIFRIPGDIDEVNALKLQVDQWRIPSGLSDPNIPASLLKLWYRELEEPVIPQEFYKECISNYENPDAAVAVVQLLPELNKLVLCYLIHFLQIFAQPSNVGRTKMDVNNLAMVMAPNCLRCQSDDPRIIFENTRKEMSFLRMLIVHLDTSFIKGLV
SIO_010081: LOC100539630
subclass of: SO_0000673
so part of: LOC100539630
location: complement(join(991069..991263,991677..991846,992291..992382,993679..993878,995069..995142,999127..999216,1000041..1000587,1002613..1003921,1009892..1010351,1011968..1012055))
location: region:991069-1012055:-1
so has part: feature:1011968-1012055:-1:exon
so has part: feature:1009892-1010351:-1:exon
so has part: feature:1002613-1003921:-1:exon
so has part: feature:1000041-1000587:-1:exon
so has part: feature:999127-999216:-1:exon
so has part: feature:995069-995142:-1:exon
so has part: feature:993679-993878:-1:exon
so has part: feature:992291-992382:-1:exon
so has part: feature:991677-991846:-1:exon
so has part: feature:991069-991263:-1:exon

XP_031412452.1
type: Protein
SIO_000068: ncbiprotein

position:991069:-1
position: 991069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011968-1012055:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1009892-1010351:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002613-1003921:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1000041-1000587:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:999127-999216:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995069-995142:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:993679-993878:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:992291-992382:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:991677-991846:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:991069-991263:-1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1037829..1037900
location: region:1037829-1037900:1
so has part: feature:1037829-1037900:1:exon
subclass of: SO_0000663

109370823
type: Gene
SIO_000068: ncbigene

position:1037829:1
position: 1037829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037900:1
position: 1037900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037829-1037900:1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1037862..1037864,aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: 1037829..1037900
location: region:1037829-1037900:1
so has part: feature:1037829-1037900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1037829-1037900:1:exon

RBM39
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1043875..1068836
location: region:1043875-1068836:1
so has part: feature:1043875-1068836:1:exon
subclass of: SO_0000010

100539784
type: Gene
SIO_000068: ncbigene

position:1043875:1
position: 1043875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1068836:1
position: 1068836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043875-1068836:1:exon

RBM39
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: RBM39
product: RNA binding motif protein 39, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XR_795747.3
SIO_010081: RBM39
so part of: RBM39
location: join(1043875..1043959,1045781..1045830,1047443..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1059703..1059883,1063667..1063699,1064803..1064878)
location: region:1043875-1064878:1
so has part: feature:1043875-1043959:1:exon
so has part: feature:1045781-1045830:1:exon
so has part: feature:1047443-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1059703-1059883:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon

position:1064878:1
position: 1064878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043875-1043959:1:exon

position:1043959:1
position: 1043959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1045781-1045830:1:exon

position:1045781:1
position: 1045781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045830:1
position: 1045830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1047443-1047637:1:exon

position:1047443:1
position: 1047443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1047637:1
position: 1047637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1052451-1052516:1:exon

position:1052451:1
position: 1052451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052516:1
position: 1052516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1052623-1052676:1:exon

position:1052623:1
position: 1052623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052676:1
position: 1052676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1053982-1054099:1:exon

position:1053982:1
position: 1053982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054099:1
position: 1054099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1054699-1054851:1:exon

position:1054699:1
position: 1054699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054851:1
position: 1054851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1055388-1055525:1:exon

position:1055388:1
position: 1055388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055525:1
position: 1055525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1056847-1056912:1:exon

position:1056847:1
position: 1056847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056912:1
position: 1056912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1057822-1058026:1:exon

position:1057822:1
position: 1057822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058026:1
position: 1058026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1058114-1058191:1:exon

position:1058114:1
position: 1058114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058191:1
position: 1058191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1059703-1059883:1:exon

position:1059703:1
position: 1059703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059883:1
position: 1059883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1063667-1063699:1:exon

position:1063667:1
position: 1063667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063699:1
position: 1063699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1064803-1064878:1:exon

position:1064803:1
position: 1064803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM39
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: RBM39
product: RNA binding motif protein 39, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XR_795748.3
SIO_010081: RBM39
so part of: RBM39
location: join(1043875..1043959,1045781..1045830,1047443..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1059760..1059883,1063667..1063699,1064803..1064878)
location: region:1043875-1064878:1
so has part: feature:1043875-1043959:1:exon
so has part: feature:1045781-1045830:1:exon
so has part: feature:1047443-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1059760-1059883:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1043875-1043959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045781-1045830:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1047443-1047637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1059760-1059883:1:exon

position:1059760:1
position: 1059760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1064803-1064878:1:exon

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBM39
product: RNA binding motif protein 39, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_010722234.2
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1043876..1043959,1045781..1045830,1047443..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1068836)
location: region:1043876-1068836:1
so has part: feature:1043876-1043959:1:exon
so has part: feature:1045781-1045830:1:exon
so has part: feature:1047443-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
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so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
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so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1068836:1:exon

position:1043876:1
position: 1043876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043876-1043959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045781-1045830:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1047443-1047637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1065045-1065150:1:exon

position:1065045:1
position: 1065045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065150:1
position: 1065150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1067666-1067744:1:exon

position:1067666:1
position: 1067666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067744:1
position: 1067744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1067841-1068836:1:exon

position:1067841:1
position: 1067841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBM39
product: RNA binding motif protein 39, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 174 samples with support for all annotated introns
transcript id: XM_010722235.3
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1043876..1043959,1045781..1045830,1047443..1047637,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1068836)
location: region:1043876-1068836:1
so has part: feature:1043876-1043959:1:exon
so has part: feature:1045781-1045830:1:exon
so has part: feature:1047443-1047637:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1068836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1043876-1043959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045781-1045830:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1047443-1047637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067841-1068836:1:exon

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBM39
product: RNA binding motif protein 39, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_019622134.2
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1043880..1043959,1044182..1044254,1045163..1045518,1045781..1045834,1047446..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1068836)
location: region:1043880-1068836:1
so has part: feature:1043880-1043959:1:exon
so has part: feature:1044182-1044254:1:exon
so has part: feature:1045163-1045518:1:exon
so has part: feature:1045781-1045834:1:exon
so has part: feature:1047446-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1068836:1:exon

position:1043880:1
position: 1043880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043880-1043959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044182-1044254:1:exon

position:1044182:1
position: 1044182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1044254:1
position: 1044254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1045163-1045518:1:exon

position:1045163:1
position: 1045163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045518:1
position: 1045518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1045781-1045834:1:exon

position:1045834:1
position: 1045834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1047446-1047637:1:exon

position:1047446:1
position: 1047446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1052623-1052676:1:exon

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SIO_000300: 8
SIO_000628: feature:1053982-1054099:1:exon

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SIO_000300: 9
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1067841-1068836:1:exon

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBM39
product: RNA binding motif protein 39, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 190 samples with support for all annotated introns
transcript id: XM_010722238.3
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1043880..1043959,1044182..1044254,1045262..1045834,1047446..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1068836)
location: region:1043880-1068836:1
so has part: feature:1043880-1043959:1:exon
so has part: feature:1044182-1044254:1:exon
so has part: feature:1045262-1045834:1:exon
so has part: feature:1047446-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1068836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1043880-1043959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044182-1044254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045262-1045834:1:exon

position:1045262:1
position: 1045262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1047446-1047637:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1067841-1068836:1:exon

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBM39
product: RNA binding motif protein 39, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 211 samples with support for all annotated introns
transcript id: XM_010722241.3
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1043880..1043959,1044182..1044254,1045781..1045834,1047446..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1068836)
location: region:1043880-1068836:1
so has part: feature:1043880-1043959:1:exon
so has part: feature:1044182-1044254:1:exon
so has part: feature:1045781-1045834:1:exon
so has part: feature:1047446-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1068836:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1043880-1043959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1044182-1044254:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1045781-1045834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1047446-1047637:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1067841-1068836:1:exon

RBM39
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBM39
product: RNA binding motif protein 39, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_010722239.2
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1043892..1043959,1045781..1045834,1047446..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1068836)
location: region:1043892-1068836:1
so has part: feature:1043892-1043959:1:exon
so has part: feature:1045781-1045834:1:exon
so has part: feature:1047446-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1068836:1:exon

position:1043892:1
position: 1043892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043892-1043959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045781-1045834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1047446-1047637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067841-1068836:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X1
translation: MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRDRERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNIAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1043909..1043959,1045781..1045830,1047443..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1067941)
location: region:1043909-1067941:1
so has part: feature:1043909-1043959:1:exon
so has part: feature:1045781-1045830:1:exon
so has part: feature:1047443-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1067941:1:exon

XP_010720536.1
type: Protein
SIO_000068: ncbiprotein

position:1043909:1
position: 1043909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1067941:1
position: 1067941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1043909-1043959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045781-1045830:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1047443-1047637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067841-1067941:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X2
translation: MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRDRERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1043909..1043959,1045781..1045830,1047443..1047637,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1067941)
location: region:1043909-1067941:1
so has part: feature:1043909-1043959:1:exon
so has part: feature:1045781-1045830:1:exon
so has part: feature:1047443-1047637:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1067941:1:exon

XP_010720537.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1043909-1043959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1045781-1045830:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1047443-1047637:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067841-1067941:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X3
translation: MATKNAARSEKKSKSRSRSHDRKRSRSKERKRSRDRERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNIAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1045806..1045834,1047446..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1067941)
location: region:1045806-1067941:1
so has part: feature:1045806-1045834:1:exon
so has part: feature:1047446-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1067941:1:exon

XP_019477679.1
type: Protein
SIO_000068: ncbiprotein

position:1045806:1
position: 1045806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1045806-1045834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047446-1047637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067841-1067941:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X3
translation: MATKNAARSEKKSKSRSRSHDRKRSRSKERKRSRDRERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNIAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1045806..1045834,1047446..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1067941)
location: region:1045806-1067941:1
so has part: feature:1045806-1045834:1:exon
so has part: feature:1047446-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1067941:1:exon

XP_010720540.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1045806-1045834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047446-1047637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067841-1067941:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X3
translation: MATKNAARSEKKSKSRSRSHDRKRSRSKERKRSRDRERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNIAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1045806..1045834,1047446..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1067941)
location: region:1045806-1067941:1
so has part: feature:1045806-1045834:1:exon
so has part: feature:1047446-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1067941:1:exon

XP_010720541.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1045806-1045834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047446-1047637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067841-1067941:1:exon

RBM39
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBM39
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 39 isoform X3
translation: MATKNAARSEKKSKSRSRSHDRKRSRSKERKRSRDRERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNIAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQLSNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
SIO_010081: RBM39
subclass of: SO_0000673
so part of: RBM39
location: join(1045806..1045834,1047446..1047637,1052451..1052516,1052623..1052676,1053982..1054099,1054699..1054851,1055388..1055525,1056847..1056912,1057822..1058026,1058114..1058191,1063667..1063699,1064803..1064878,1065045..1065150,1067666..1067744,1067841..1067941)
location: region:1045806-1067941:1
so has part: feature:1045806-1045834:1:exon
so has part: feature:1047446-1047637:1:exon
so has part: feature:1052451-1052516:1:exon
so has part: feature:1052623-1052676:1:exon
so has part: feature:1053982-1054099:1:exon
so has part: feature:1054699-1054851:1:exon
so has part: feature:1055388-1055525:1:exon
so has part: feature:1056847-1056912:1:exon
so has part: feature:1057822-1058026:1:exon
so has part: feature:1058114-1058191:1:exon
so has part: feature:1063667-1063699:1:exon
so has part: feature:1064803-1064878:1:exon
so has part: feature:1065045-1065150:1:exon
so has part: feature:1067666-1067744:1:exon
so has part: feature:1067841-1067941:1:exon

XP_010720543.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1045806-1045834:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1047446-1047637:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1052451-1052516:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1052623-1052676:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1053982-1054099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1054699-1054851:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1055388-1055525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1056847-1056912:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1057822-1058026:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058114-1058191:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1063667-1063699:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1064803-1064878:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1065045-1065150:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1067666-1067744:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067841-1067941:1:exon

ROMO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ROMO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1072069..1073570)
location: region:1072069-1073570:-1
so has part: feature:1072069-1073570:-1:exon
subclass of: SO_0000010

104913971
type: Gene
SIO_000068: ncbigene

position:1072069:-1
position: 1072069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073570:-1
position: 1073570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072069-1073570:-1:exon

ROMO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ROMO1
product: reactive oxygen species modulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010722242.2
SIO_010081: ROMO1
subclass of: SO_0000673
so part of: ROMO1
location: complement(join(1072069..1072259,1073405..1073570))
location: region:1072069-1073570:-1
so has part: feature:1073405-1073570:-1:exon
so has part: feature:1072069-1072259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1073405-1073570:-1:exon

position:1073405:-1
position: 1073405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1072069-1072259:-1:exon

position:1072259:-1
position: 1072259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROMO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ROMO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reactive oxygen species modulator 1
translation: MPVTVGPYGQSQPSCFDRVKMGFVMGFAVGMAAGALFGTFSCLRIGMRGRELMGGVGKTMMQSGGTFGTFMAIGMGIRC
SIO_010081: ROMO1
subclass of: SO_0000673
so part of: ROMO1
location: complement(join(1072151..1072259,1073405..1073535))
location: region:1072151-1073535:-1
so has part: feature:1073405-1073535:-1:exon
so has part: feature:1072151-1072259:-1:exon

XP_010720544.1
type: Protein
SIO_000068: ncbiprotein

position:1072151:-1
position: 1072151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073535:-1
position: 1073535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1073405-1073535:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1072151-1072259:-1:exon

NFS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NFS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1074178..1085683
location: region:1074178-1085683:1
so has part: feature:1074178-1085683:1:exon
subclass of: SO_0000010

100539939
type: Gene
SIO_000068: ncbigene

position:1074178:1
position: 1074178
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1085683:1
position: 1085683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074178-1085683:1:exon

NFS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NFS1
product: NFS1 cysteine desulfurase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010722257.2
SIO_010081: NFS1
subclass of: SO_0000673
so part of: NFS1
location: join(<1074178..1074312,1075188..1075340,1076293..1076386,1077831..1077965,1079037..1079231,1083028..1083136,1083263..1083352,1083968..1085683)
location: region:1074178-1085683:1
so has part: feature:1074178-1074312:1:exon
so has part: feature:1075188-1075340:1:exon
so has part: feature:1076293-1076386:1:exon
so has part: feature:1077831-1077965:1:exon
so has part: feature:1079037-1079231:1:exon
so has part: feature:1083028-1083136:1:exon
so has part: feature:1083263-1083352:1:exon
so has part: feature:1083968-1085683:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1074178-1074312:1:exon

position:1074312:1
position: 1074312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1075188-1075340:1:exon

position:1075188:1
position: 1075188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075340:1
position: 1075340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1076293-1076386:1:exon

position:1076293:1
position: 1076293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076386:1
position: 1076386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1077831-1077965:1:exon

position:1077831:1
position: 1077831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077965:1
position: 1077965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1079037-1079231:1:exon

position:1079037:1
position: 1079037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079231:1
position: 1079231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1083028-1083136:1:exon

position:1083028:1
position: 1083028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083136:1
position: 1083136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1083263-1083352:1:exon

position:1083263:1
position: 1083263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083352:1
position: 1083352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1083968-1085683:1:exon

position:1083968:1
position: 1083968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NFS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cysteine desulfurase, mitochondrial
translation: IHRVLSHRLRPAFLSRQQVADLIGADPREIIFTSGATESNNMAIKGVARFYKSRKKHIITTQTEHKCVLDSCRSLEAEGFQITYLPVQKNGLIDLKELEAAFQPDTSLVSVMAVNNEIGVKQPIRDIGEICRARQVFFHTDAAQAVGKIPLDVNDLKIDLMSISGHKIYGPKGVGAIYVRRRPRVRLEPLQSGGGQERGLRSGTVPTPLAVGLGAACEVAQEEMEVGGSGASPAARRYWPFFPFPSACTSASLEPSYVLRAIGADEDLAHSSIRFGIGRFTTEEEIDYTVQKCIQHVKRLREMSPLWEMVQDGIDLKSIKWSQH
SIO_010081: NFS1
subclass of: SO_0000673
so part of: NFS1
location: join(<1074178..1074312,1075188..1075340,1076293..1076386,1077831..1077965,1079037..1079231,1083028..1083136,1083263..1083352,1083968..1084031)
location: region:1074178-1084031:1
so has part: feature:1074178-1074312:1:exon
so has part: feature:1075188-1075340:1:exon
so has part: feature:1076293-1076386:1:exon
so has part: feature:1077831-1077965:1:exon
so has part: feature:1079037-1079231:1:exon
so has part: feature:1083028-1083136:1:exon
so has part: feature:1083263-1083352:1:exon
so has part: feature:1083968-1084031:1:exon

XP_010720559.2
type: Protein
SIO_000068: ncbiprotein

position:1084031:1
position: 1084031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074178-1074312:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1075188-1075340:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1076293-1076386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1077831-1077965:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1079037-1079231:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083028-1083136:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1083263-1083352:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1083968-1084031:1:exon

CPNE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1090711..1132296
location: region:1090711-1132296:1
so has part: feature:1090711-1132296:1:exon
subclass of: SO_0000010

100540093
type: Gene
SIO_000068: ncbigene

position:1090711:1
position: 1090711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132296:1
position: 1132296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090711-1132296:1:exon

CPNE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPNE1
product: copine 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_010722245.3
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(1090711..1090789,1116766..1116891,1117013..1117192,1118434..1118508,1118714..1118785,1119401..1119484,1119927..1120016,1123589..1123687,1124886..1124972,1125072..1125131,1125564..1125697,1126339..1126393,1126472..1126523,1128060..1128193,1129925..1130161,1130895..1132296)
location: region:1090711-1132296:1
so has part: feature:1090711-1090789:1:exon
so has part: feature:1116766-1116891:1:exon
so has part: feature:1117013-1117192:1:exon
so has part: feature:1118434-1118508:1:exon
so has part: feature:1118714-1118785:1:exon
so has part: feature:1119401-1119484:1:exon
so has part: feature:1119927-1120016:1:exon
so has part: feature:1123589-1123687:1:exon
so has part: feature:1124886-1124972:1:exon
so has part: feature:1125072-1125131:1:exon
so has part: feature:1125564-1125697:1:exon
so has part: feature:1126339-1126393:1:exon
so has part: feature:1126472-1126523:1:exon
so has part: feature:1128060-1128193:1:exon
so has part: feature:1129925-1130161:1:exon
so has part: feature:1130895-1132296:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1090711-1090789:1:exon

position:1090789:1
position: 1090789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1116766-1116891:1:exon

position:1116766:1
position: 1116766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116891:1
position: 1116891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1117013-1117192:1:exon

position:1117013:1
position: 1117013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117192:1
position: 1117192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1118434-1118508:1:exon

position:1118434:1
position: 1118434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118508:1
position: 1118508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1118714-1118785:1:exon

position:1118714:1
position: 1118714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118785:1
position: 1118785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1119401-1119484:1:exon

position:1119401:1
position: 1119401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119484:1
position: 1119484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1119927-1120016:1:exon

position:1119927:1
position: 1119927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120016:1
position: 1120016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1123589-1123687:1:exon

position:1123589:1
position: 1123589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123687:1
position: 1123687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1124886-1124972:1:exon

position:1124886:1
position: 1124886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124972:1
position: 1124972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1125072-1125131:1:exon

position:1125072:1
position: 1125072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125131:1
position: 1125131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1125564-1125697:1:exon

position:1125564:1
position: 1125564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125697:1
position: 1125697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1126339-1126393:1:exon

position:1126339:1
position: 1126339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126393:1
position: 1126393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1126472-1126523:1:exon

position:1126472:1
position: 1126472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126523:1
position: 1126523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1128060-1128193:1:exon

position:1128060:1
position: 1128060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128193:1
position: 1128193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1129925-1130161:1:exon

position:1129925:1
position: 1129925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130161:1
position: 1130161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1130895-1132296:1:exon

position:1130895:1
position: 1130895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPNE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPNE1
product: copine 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_010722244.3
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(1090744..1090789,1092400..1092450,1116766..1116891,1117013..1117192,1118434..1118508,1118714..1118785,1119401..1119484,1119927..1120016,1123589..1123687,1124886..1124972,1125072..1125131,1125564..1125697,1126339..1126393,1126472..1126523,1128060..1128193,1129925..1130161,1130895..1132296)
location: region:1090744-1132296:1
so has part: feature:1090744-1090789:1:exon
so has part: feature:1092400-1092450:1:exon
so has part: feature:1116766-1116891:1:exon
so has part: feature:1117013-1117192:1:exon
so has part: feature:1118434-1118508:1:exon
so has part: feature:1118714-1118785:1:exon
so has part: feature:1119401-1119484:1:exon
so has part: feature:1119927-1120016:1:exon
so has part: feature:1123589-1123687:1:exon
so has part: feature:1124886-1124972:1:exon
so has part: feature:1125072-1125131:1:exon
so has part: feature:1125564-1125697:1:exon
so has part: feature:1126339-1126393:1:exon
so has part: feature:1126472-1126523:1:exon
so has part: feature:1128060-1128193:1:exon
so has part: feature:1129925-1130161:1:exon
so has part: feature:1130895-1132296:1:exon

position:1090744:1
position: 1090744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090744-1090789:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1092400-1092450:1:exon

position:1092400:1
position: 1092400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092450:1
position: 1092450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1116766-1116891:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1117013-1117192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118434-1118508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1118714-1118785:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1119401-1119484:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1119927-1120016:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1123589-1123687:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1124886-1124972:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1125072-1125131:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1125564-1125697:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1126339-1126393:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1126472-1126523:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1128060-1128193:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1129925-1130161:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1130895-1132296:1:exon

RBM12
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RBM12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1092368..1101368
location: region:1092368-1101368:1
so has part: feature:1092368-1101368:1:exon
subclass of: SO_0000010

104913972
type: Gene
SIO_000068: ncbigene

position:1092368:1
position: 1092368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101368:1
position: 1101368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1092368-1101368:1:exon

RBM12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBM12
product: RNA binding motif protein 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_010722243.2
SIO_010081: RBM12
subclass of: SO_0000673
so part of: RBM12
location: join(1092368..1092450,1096760..1101368)
location: region:1092368-1101368:1
so has part: feature:1092368-1092450:1:exon
so has part: feature:1096760-1101368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1092368-1092450:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1096760-1101368:1:exon

position:1096760:1
position: 1096760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBM12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBM12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 12
translation: MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRTGGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDMPPANASRSGPPPSSGMSGRVNLPTTVPNFNNPSPSVVTASTTVHESNKNISTFSTASMGTAPPNLGNTFGSPTFSSTIPSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPPVPPMTPIPPISGMPPLNPPPVAPLPTGMNGSGAAVNMNSGLNPLFIGPMNPVNPIQMNSQSSVKPIPINPDDLYVSVHGMPFSATESDVKEFFLGLRVDAIHMLKDHVGRNNGNGLVKFFSPQDTFEALKRNRMLMIQRYVEVSPATERQWVAAGGHITFKQTMGPSGQPHPPPPQPHSRSKSPSGQKRSRSRSPHEQGFCVYLKGLPFESENKHVIDFFKKLDIVEDSIYIAYGPNGKAIGEGFVEFRNEADYKAALCHHKQYIGNRFIQVHPITKKAMLEKIDLIRKRLQNFNYDQREIIMNAEAESGSPKLCAHISNIPYNITKMEILQFLEGLAVEENSVQILVDNNGQGLGQALVQFKAEDDARKAERLHRKKLNGRDVVLRLITVEEMRDIERNPPSQGKKILKIPIQGNVAVPGAQPPAGDEHAFLGGNPKDANNGPPFNFPSNFSGSGTFGPPLPPPGIGGFPDARPGIPAVASAGLPGAGIEVPGFAGGPANLSGPSGFGGGPQNFGNGPGNLSGPPGFAGGPPGIAGGLGHLGGPPAFGPGPGNIHIGGPPGFGTGSGKPGPTVIKVQNMPFTVSVDEILDFFYGYQVIPGSVCLKYNEKGMPTGEAMVAFESRDEAMAAVVDLNDRPIGSRKVKLVLG
SIO_010081: RBM12
subclass of: SO_0000673
so part of: RBM12
location: 1096782..1099424
location: region:1096782-1099424:1
so has part: feature:1096782-1099424:1:exon

XP_010720545.1
type: Protein
SIO_000068: ncbiprotein

position:1096782:1
position: 1096782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099424:1
position: 1099424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1096782-1099424:1:exon

CPNE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPNE1
product: copine 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019622135.2
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(1111581..1111599,1116766..1116891,1117013..1117192,1118434..1118508,1118714..1118785,1119401..1119484,1119927..1120016,1123589..1123687,1124886..1124972,1125072..1125131,1125564..1125697,1126339..1126393,1126472..1126523,1128060..1128193,1129925..1130161,1130895..1132296)
location: region:1111581-1132296:1
so has part: feature:1111581-1111599:1:exon
so has part: feature:1116766-1116891:1:exon
so has part: feature:1117013-1117192:1:exon
so has part: feature:1118434-1118508:1:exon
so has part: feature:1118714-1118785:1:exon
so has part: feature:1119401-1119484:1:exon
so has part: feature:1119927-1120016:1:exon
so has part: feature:1123589-1123687:1:exon
so has part: feature:1124886-1124972:1:exon
so has part: feature:1125072-1125131:1:exon
so has part: feature:1125564-1125697:1:exon
so has part: feature:1126339-1126393:1:exon
so has part: feature:1126472-1126523:1:exon
so has part: feature:1128060-1128193:1:exon
so has part: feature:1129925-1130161:1:exon
so has part: feature:1130895-1132296:1:exon

position:1111581:1
position: 1111581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1111581-1111599:1:exon

position:1111599:1
position: 1111599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1116766-1116891:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1117013-1117192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118434-1118508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118714-1118785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1119401-1119484:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1119927-1120016:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1123589-1123687:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1124886-1124972:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1125072-1125131:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1125564-1125697:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1126339-1126393:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1126472-1126523:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1128060-1128193:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1129925-1130161:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1130895-1132296:1:exon

CPNE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-1
translation: MAQCVSRVQLSVICRHLLDRDVGSKSDPLCVLLLDVGGRWAELDRTERIKNCQDPEFSKKLLVDYYFEKVQKLKFGVYDIDNKSAELSDDDFLGAVECTLGQIVSSSVFTRPLELKEGKPAGKGTITITAEEIKDTRVVNLEIQARNLDKKDFLGKSDPFLELYKQSDAGMWQLVYRSEVVKNNLSPCWRRFSVPLQTFCGGDLNKPIKVHCSDHDSDGSHDLIGVFETNLAQLQKAVDGCPVEFECIHPEKKQKKKSYKNSGIISIKSCKIETDYSFLDYVMGGCQINFTVGIDFTGSNGDPNSPDSLHYISPNGINEYLTAIWSVGSVVQDYDTDKLFPAFGFGAQVPPSWQVSHEFALNFNPNNPYCPGIQGIVDAYRQILPQIRLYGPTNFSPIINHVARFAAHSAQQRTASQYFVLLIITDGEITDLDQTRQAIVNASKLPMSIIIVGVGEADFKAMEFLDGDSGVLKSLTGEPAARDIVQFVPFRQFRNAPREALSQVVLAEVPKQLVSYYKLQGWPPLKLPEIKKV
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(1116766..1116891,1117013..1117192,1118434..1118508,1118714..1118785,1119401..1119484,1119927..1120016,1123589..1123687,1124886..1124972,1125072..1125131,1125564..1125697,1126339..1126393,1126472..1126523,1128060..1128193,1129925..1130161,1130895..1131011)
location: region:1116766-1131011:1
so has part: feature:1116766-1116891:1:exon
so has part: feature:1117013-1117192:1:exon
so has part: feature:1118434-1118508:1:exon
so has part: feature:1118714-1118785:1:exon
so has part: feature:1119401-1119484:1:exon
so has part: feature:1119927-1120016:1:exon
so has part: feature:1123589-1123687:1:exon
so has part: feature:1124886-1124972:1:exon
so has part: feature:1125072-1125131:1:exon
so has part: feature:1125564-1125697:1:exon
so has part: feature:1126339-1126393:1:exon
so has part: feature:1126472-1126523:1:exon
so has part: feature:1128060-1128193:1:exon
so has part: feature:1129925-1130161:1:exon
so has part: feature:1130895-1131011:1:exon

XP_019477680.1
type: Protein
SIO_000068: ncbiprotein

position:1131011:1
position: 1131011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116766-1116891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1117013-1117192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1118434-1118508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118714-1118785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119401-1119484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1119927-1120016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1123589-1123687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1124886-1124972:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1125072-1125131:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1125564-1125697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1126339-1126393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1126472-1126523:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1128060-1128193:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1129925-1130161:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1130895-1131011:1:exon

CPNE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-1
translation: MAQCVSRVQLSVICRHLLDRDVGSKSDPLCVLLLDVGGRWAELDRTERIKNCQDPEFSKKLLVDYYFEKVQKLKFGVYDIDNKSAELSDDDFLGAVECTLGQIVSSSVFTRPLELKEGKPAGKGTITITAEEIKDTRVVNLEIQARNLDKKDFLGKSDPFLELYKQSDAGMWQLVYRSEVVKNNLSPCWRRFSVPLQTFCGGDLNKPIKVHCSDHDSDGSHDLIGVFETNLAQLQKAVDGCPVEFECIHPEKKQKKKSYKNSGIISIKSCKIETDYSFLDYVMGGCQINFTVGIDFTGSNGDPNSPDSLHYISPNGINEYLTAIWSVGSVVQDYDTDKLFPAFGFGAQVPPSWQVSHEFALNFNPNNPYCPGIQGIVDAYRQILPQIRLYGPTNFSPIINHVARFAAHSAQQRTASQYFVLLIITDGEITDLDQTRQAIVNASKLPMSIIIVGVGEADFKAMEFLDGDSGVLKSLTGEPAARDIVQFVPFRQFRNAPREALSQVVLAEVPKQLVSYYKLQGWPPLKLPEIKKV
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(1116766..1116891,1117013..1117192,1118434..1118508,1118714..1118785,1119401..1119484,1119927..1120016,1123589..1123687,1124886..1124972,1125072..1125131,1125564..1125697,1126339..1126393,1126472..1126523,1128060..1128193,1129925..1130161,1130895..1131011)
location: region:1116766-1131011:1
so has part: feature:1116766-1116891:1:exon
so has part: feature:1117013-1117192:1:exon
so has part: feature:1118434-1118508:1:exon
so has part: feature:1118714-1118785:1:exon
so has part: feature:1119401-1119484:1:exon
so has part: feature:1119927-1120016:1:exon
so has part: feature:1123589-1123687:1:exon
so has part: feature:1124886-1124972:1:exon
so has part: feature:1125072-1125131:1:exon
so has part: feature:1125564-1125697:1:exon
so has part: feature:1126339-1126393:1:exon
so has part: feature:1126472-1126523:1:exon
so has part: feature:1128060-1128193:1:exon
so has part: feature:1129925-1130161:1:exon
so has part: feature:1130895-1131011:1:exon

XP_010720546.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1116766-1116891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1117013-1117192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1118434-1118508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118714-1118785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119401-1119484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1119927-1120016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1123589-1123687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1124886-1124972:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1125072-1125131:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1125564-1125697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1126339-1126393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1126472-1126523:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1128060-1128193:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1129925-1130161:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1130895-1131011:1:exon

CPNE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPNE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: copine-1
translation: MAQCVSRVQLSVICRHLLDRDVGSKSDPLCVLLLDVGGRWAELDRTERIKNCQDPEFSKKLLVDYYFEKVQKLKFGVYDIDNKSAELSDDDFLGAVECTLGQIVSSSVFTRPLELKEGKPAGKGTITITAEEIKDTRVVNLEIQARNLDKKDFLGKSDPFLELYKQSDAGMWQLVYRSEVVKNNLSPCWRRFSVPLQTFCGGDLNKPIKVHCSDHDSDGSHDLIGVFETNLAQLQKAVDGCPVEFECIHPEKKQKKKSYKNSGIISIKSCKIETDYSFLDYVMGGCQINFTVGIDFTGSNGDPNSPDSLHYISPNGINEYLTAIWSVGSVVQDYDTDKLFPAFGFGAQVPPSWQVSHEFALNFNPNNPYCPGIQGIVDAYRQILPQIRLYGPTNFSPIINHVARFAAHSAQQRTASQYFVLLIITDGEITDLDQTRQAIVNASKLPMSIIIVGVGEADFKAMEFLDGDSGVLKSLTGEPAARDIVQFVPFRQFRNAPREALSQVVLAEVPKQLVSYYKLQGWPPLKLPEIKKV
SIO_010081: CPNE1
subclass of: SO_0000673
so part of: CPNE1
location: join(1116766..1116891,1117013..1117192,1118434..1118508,1118714..1118785,1119401..1119484,1119927..1120016,1123589..1123687,1124886..1124972,1125072..1125131,1125564..1125697,1126339..1126393,1126472..1126523,1128060..1128193,1129925..1130161,1130895..1131011)
location: region:1116766-1131011:1
so has part: feature:1116766-1116891:1:exon
so has part: feature:1117013-1117192:1:exon
so has part: feature:1118434-1118508:1:exon
so has part: feature:1118714-1118785:1:exon
so has part: feature:1119401-1119484:1:exon
so has part: feature:1119927-1120016:1:exon
so has part: feature:1123589-1123687:1:exon
so has part: feature:1124886-1124972:1:exon
so has part: feature:1125072-1125131:1:exon
so has part: feature:1125564-1125697:1:exon
so has part: feature:1126339-1126393:1:exon
so has part: feature:1126472-1126523:1:exon
so has part: feature:1128060-1128193:1:exon
so has part: feature:1129925-1130161:1:exon
so has part: feature:1130895-1131011:1:exon

XP_010720547.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1116766-1116891:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1117013-1117192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1118434-1118508:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118714-1118785:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1119401-1119484:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1119927-1120016:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1123589-1123687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1124886-1124972:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1125072-1125131:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1125564-1125697:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1126339-1126393:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1126472-1126523:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1128060-1128193:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1129925-1130161:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1130895-1131011:1:exon

LOC100540249
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100540249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1133164..1168515
location: region:1133164-1168515:1
so has part: feature:1133164-1168515:1:exon
subclass of: SO_0000010

100540249
type: Gene
SIO_000068: ncbigene

position:1133164:1
position: 1133164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168515:1
position: 1168515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1133164-1168515:1:exon

LOC100540249
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100540249
product: fer-1-like protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010722246.3
SIO_010081: LOC100540249
subclass of: SO_0000673
so part of: LOC100540249
location: join(1133164..1134213,1134309..1134364,1135714..1135802,1137059..1137158,1138173..1138264,1138856..1138897,1138999..1139166,1139436..1139496,1140355..1140486,1140636..1140698,1141328..1141412,1141681..1141840,1141994..1142177,1142751..1142937,1143124..1143488,1144091..1144199,1144945..1145143,1145837..1145957,1146510..1146610,1147164..1147251,1148273..1148389,1149514..1149666,1149897..1150080,1150639..1150763,1151156..1151290,1152397..1152570,1152725..1152841,1153164..1153325,1154003..1154165,1155165..1155268,1155613..1155744,1156404..1156452,1157292..1157398,1157723..1157854,1158527..1158637,1159099..1159226,1159681..1159851,1160568..1160722,1162867..1163045,1163665..1163750,1164500..1164598,1164857..1165098,1167163..1167437,1167676..1167776,1167968..1168515)
location: region:1133164-1168515:1
so has part: feature:1133164-1134213:1:exon
so has part: feature:1134309-1134364:1:exon
so has part: feature:1135714-1135802:1:exon
so has part: feature:1137059-1137158:1:exon
so has part: feature:1138173-1138264:1:exon
so has part: feature:1138856-1138897:1:exon
so has part: feature:1138999-1139166:1:exon
so has part: feature:1139436-1139496:1:exon
so has part: feature:1140355-1140486:1:exon
so has part: feature:1140636-1140698:1:exon
so has part: feature:1141328-1141412:1:exon
so has part: feature:1141681-1141840:1:exon
so has part: feature:1141994-1142177:1:exon
so has part: feature:1142751-1142937:1:exon
so has part: feature:1143124-1143488:1:exon
so has part: feature:1144091-1144199:1:exon
so has part: feature:1144945-1145143:1:exon
so has part: feature:1145837-1145957:1:exon
so has part: feature:1146510-1146610:1:exon
so has part: feature:1147164-1147251:1:exon
so has part: feature:1148273-1148389:1:exon
so has part: feature:1149514-1149666:1:exon
so has part: feature:1149897-1150080:1:exon
so has part: feature:1150639-1150763:1:exon
so has part: feature:1151156-1151290:1:exon
so has part: feature:1152397-1152570:1:exon
so has part: feature:1152725-1152841:1:exon
so has part: feature:1153164-1153325:1:exon
so has part: feature:1154003-1154165:1:exon
so has part: feature:1155165-1155268:1:exon
so has part: feature:1155613-1155744:1:exon
so has part: feature:1156404-1156452:1:exon
so has part: feature:1157292-1157398:1:exon
so has part: feature:1157723-1157854:1:exon
so has part: feature:1158527-1158637:1:exon
so has part: feature:1159099-1159226:1:exon
so has part: feature:1159681-1159851:1:exon
so has part: feature:1160568-1160722:1:exon
so has part: feature:1162867-1163045:1:exon
so has part: feature:1163665-1163750:1:exon
so has part: feature:1164500-1164598:1:exon
so has part: feature:1164857-1165098:1:exon
so has part: feature:1167163-1167437:1:exon
so has part: feature:1167676-1167776:1:exon
so has part: feature:1167968-1168515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1133164-1134213:1:exon

position:1134213:1
position: 1134213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1134309-1134364:1:exon

position:1134309:1
position: 1134309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1134364:1
position: 1134364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1135714-1135802:1:exon

position:1135714:1
position: 1135714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1135802:1
position: 1135802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1137059-1137158:1:exon

position:1137059:1
position: 1137059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137158:1
position: 1137158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1138173-1138264:1:exon

position:1138173:1
position: 1138173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138264:1
position: 1138264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1138856-1138897:1:exon

position:1138856:1
position: 1138856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138897:1
position: 1138897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1138999-1139166:1:exon

position:1138999:1
position: 1138999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139166:1
position: 1139166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1139436-1139496:1:exon

position:1139436:1
position: 1139436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139496:1
position: 1139496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1140355-1140486:1:exon

position:1140355:1
position: 1140355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140486:1
position: 1140486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1140636-1140698:1:exon

position:1140636:1
position: 1140636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140698:1
position: 1140698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1141328-1141412:1:exon

position:1141328:1
position: 1141328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141412:1
position: 1141412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1141681-1141840:1:exon

position:1141681:1
position: 1141681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141840:1
position: 1141840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1141994-1142177:1:exon

position:1141994:1
position: 1141994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142177:1
position: 1142177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1142751-1142937:1:exon

position:1142751:1
position: 1142751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142937:1
position: 1142937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1143124-1143488:1:exon

position:1143124:1
position: 1143124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143488:1
position: 1143488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1144091-1144199:1:exon

position:1144091:1
position: 1144091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144199:1
position: 1144199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1144945-1145143:1:exon

position:1144945:1
position: 1144945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145143:1
position: 1145143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1145837-1145957:1:exon

position:1145837:1
position: 1145837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145957:1
position: 1145957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1146510-1146610:1:exon

position:1146510:1
position: 1146510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146610:1
position: 1146610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1147164-1147251:1:exon

position:1147164:1
position: 1147164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147251:1
position: 1147251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1148273-1148389:1:exon

position:1148273:1
position: 1148273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148389:1
position: 1148389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1149514-1149666:1:exon

position:1149514:1
position: 1149514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149666:1
position: 1149666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1149897-1150080:1:exon

position:1149897:1
position: 1149897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150080:1
position: 1150080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1150639-1150763:1:exon

position:1150639:1
position: 1150639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150763:1
position: 1150763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1151156-1151290:1:exon

position:1151156:1
position: 1151156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151290:1
position: 1151290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1152397-1152570:1:exon

position:1152397:1
position: 1152397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152570:1
position: 1152570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1152725-1152841:1:exon

position:1152725:1
position: 1152725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152841:1
position: 1152841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1153164-1153325:1:exon

position:1153164:1
position: 1153164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153325:1
position: 1153325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1154003-1154165:1:exon

position:1154003:1
position: 1154003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1154165:1
position: 1154165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1155165-1155268:1:exon

position:1155165:1
position: 1155165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155268:1
position: 1155268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1155613-1155744:1:exon

position:1155613:1
position: 1155613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1155744:1
position: 1155744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1156404-1156452:1:exon

position:1156404:1
position: 1156404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156452:1
position: 1156452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1157292-1157398:1:exon

position:1157292:1
position: 1157292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157398:1
position: 1157398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1157723-1157854:1:exon

position:1157723:1
position: 1157723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1157854:1
position: 1157854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1158527-1158637:1:exon

position:1158527:1
position: 1158527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1158637:1
position: 1158637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1159099-1159226:1:exon

position:1159099:1
position: 1159099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159226:1
position: 1159226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1159681-1159851:1:exon

position:1159681:1
position: 1159681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159851:1
position: 1159851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1160568-1160722:1:exon

position:1160568:1
position: 1160568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160722:1
position: 1160722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1162867-1163045:1:exon

position:1162867:1
position: 1162867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163045:1
position: 1163045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1163665-1163750:1:exon

position:1163665:1
position: 1163665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163750:1
position: 1163750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1164500-1164598:1:exon

position:1164500:1
position: 1164500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164598:1
position: 1164598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:1164857-1165098:1:exon

position:1164857:1
position: 1164857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1165098:1
position: 1165098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:1167163-1167437:1:exon

position:1167163:1
position: 1167163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167437:1
position: 1167437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:1167676-1167776:1:exon

position:1167676:1
position: 1167676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167776:1
position: 1167776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:1167968-1168515:1:exon

position:1167968:1
position: 1167968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100540249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100540249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fer-1-like protein 4
translation: MALSVGVRRLSNLPGRGERQVQLGFRGFTQKTKKIRCGPEAVFRELFRWPHYGKLGVGEMLSVKVYNCSKVFSNRLLGTLVLSLQHLMTSGRLILREALVDRNHSITGIYIELDLRYQPPEGSAGTWVEEDFVYQMKDSSELIICNPAFEELEAAEGPRASELDRRAVTLGRKLAKGLETEEEEEEIEEDFYDVSDVEVLGIVFSPVKSRSRICSTWDLFATPTPQSFQVGINIIEAQKLVGVNINPFVVIRVGEEKRHTATQKSTNCPFYNEYFLFEFHEPREVLFHRLIEISVFHSKKIPFLGTCIGTFKMDIATVYNQPDHRFFQKWAVISDPTDTRAGVKGFVKCNISVTARGDTVGSLPTSSSSRVEDIEKNLLLPKRVPAERPWARVCIKLYRAEGLPSMSAGIMGGFSKIIGEKNVFIDPYVQVSFCGQQGETSVESNTTEPEWNEQISFIEMFPPLAKKIKIQVLDDANVGDVAIATHYIDLQQISDPSRNGFNPTFGPAWVNLYGSPQNSALRDIHKDLNEGMGEGIFYRGRILMAITVEIFSSPGVTERKLGDKTKGALSKLKLKKKSKKSKAKARELIQLQGEEEAGGSQEAEQPAEVIVEVEELHPLPENALGRKEEFFLFAAFFEATMMDSSLSSKPVSFEVSIGNFGKAEEAVTKVRKKGEKGEGREENHPLLDAGSDSELDMEVLAPDSAPRNKSMTRSQRPEPTEYDRSYSCLPMMHEKPCVYVWSYWEDHTWRLCISNWIVKLAERLEQGLDDVEKLMRRPKAKAEERLREVLEEFVAGCRQYSLSAERKTMAHPNNLDRCRTKYMMRNIILYAKQGLRVRRWLTRANVKEKVKETRRILAKLRFMAQEPQCILPDVLIWMLSNNRRVAYARVPAQNILYSVVEEEKGKDCAKIQTVFLKVPGLHTGEIFAKLEIYMWLGVTKYAKNCTVELPEEFKYLSESRQEITQFSVHSPPSWLSRDDFSYFQLRAHLYQARGILPADDNGLSDPFVRVVFSTHCQTTRTVEETLSPMWNELLLFDQLIIDGKREELKTETPVVIISLFNQSTFGSPEFLGQAFAVPQVKLVDEPYCKPALQFFDFYKGSKPAGELIATFELIELDYSGYLEPSVPEDVEPKEPSYLGDPRAGRFIIPEGIRPVLKEFRIEILFWGLRDLKRVNLFEVDQPQVIIECAGKKVESEVIVAYSENPNFTELVKYMDVELPEQVYLHPPLSIFVVEKRAFGRTVLVGTHVVSDVMKFSPRELEEEETEDVPKAQKFSTRRLPPQTAVTTGPASGQPGPSAHPLSLVKAPLKKIPINKFAKKEDEYEEEKPDPEELDWWSKYYESLKELYNQTRSDEEDAENDDLNDADGGNLNAAYIDMEAEDETVIEAEPAQPRRKLIATLQIYNSELENEFDNFEDWLCIFPLHRGKANDDEDGHEDENSVGKYKGSFYVYPSVEAGMEPKVSQGVPRNRPIKVLVRVYIVKATNLSPADPNGKADPYVVVTVGQEQKDTKERYIPKQLNPVFGEVVELTVSFPMESELTVAVFDHDLVGSDDLIGETKIDLENRFYSKHRANCGVASQYDTNGYNTWRDAFKPTQILDSLCKKMSLPAAEYRREEVKVGNKIFKVPPEAFPEEASVRAQRGAADENWSVDDEHKALYVLQHWEEMPGHGYKLVPEHVEIRSLYNPESPGLVQGSLHMWIDMFPNDVPAPPPVNIKPRLPISYELRVIIWNTDDVILDDVNPVTGEPSSDIYVKSWIKGLDHDKQETDVHFNSLTGEGNFNWRFIFRFNYLPTEKEITYKKKDSVFSVEESEFREPAVLVLQVWDYDRISANDFLGSIELKLHDMVRAAKSSEHCTIKMAKENAAPRFSIFRNKRMRGWWPFIKLKDQEDEEREAKEKKKKKKKWSSSVKPEDIEFTDPSGNKYFLTGKVEAEFQLLTMEEAEKNPVGLGRKEPEPLEKPNRPKTSFNWFMNPMKTFVFFIWKRYKKYIIVLFVVALLTV…
SIO_010081: LOC100540249
subclass of: SO_0000673
so part of: LOC100540249
location: join(1134135..1134213,1134309..1134364,1135714..1135802,1137059..1137158,1138173..1138264,1138856..1138897,1138999..1139166,1139436..1139496,1140355..1140486,1140636..1140698,1141328..1141412,1141681..1141840,1141994..1142177,1142751..1142937,1143124..1143488,1144091..1144199,1144945..1145143,1145837..1145957,1146510..1146610,1147164..1147251,1148273..1148389,1149514..1149666,1149897..1150080,1150639..1150763,1151156..1151290,1152397..1152570,1152725..1152841,1153164..1153325,1154003..1154165,1155165..1155268,1155613..1155744,1156404..1156452,1157292..1157398,1157723..1157854,1158527..1158637,1159099..1159226,1159681..1159851,1160568..1160722,1162867..1163045,1163665..1163750,1164500..1164598,1164857..1165098,1167163..1167437,1167676..1167776,1167968..1168148)
location: region:1134135-1168148:1
so has part: feature:1134135-1134213:1:exon
so has part: feature:1134309-1134364:1:exon
so has part: feature:1135714-1135802:1:exon
so has part: feature:1137059-1137158:1:exon
so has part: feature:1138173-1138264:1:exon
so has part: feature:1138856-1138897:1:exon
so has part: feature:1138999-1139166:1:exon
so has part: feature:1139436-1139496:1:exon
so has part: feature:1140355-1140486:1:exon
so has part: feature:1140636-1140698:1:exon
so has part: feature:1141328-1141412:1:exon
so has part: feature:1141681-1141840:1:exon
so has part: feature:1141994-1142177:1:exon
so has part: feature:1142751-1142937:1:exon
so has part: feature:1143124-1143488:1:exon
so has part: feature:1144091-1144199:1:exon
so has part: feature:1144945-1145143:1:exon
so has part: feature:1145837-1145957:1:exon
so has part: feature:1146510-1146610:1:exon
so has part: feature:1147164-1147251:1:exon
so has part: feature:1148273-1148389:1:exon
so has part: feature:1149514-1149666:1:exon
so has part: feature:1149897-1150080:1:exon
so has part: feature:1150639-1150763:1:exon
so has part: feature:1151156-1151290:1:exon
so has part: feature:1152397-1152570:1:exon
so has part: feature:1152725-1152841:1:exon
so has part: feature:1153164-1153325:1:exon
so has part: feature:1154003-1154165:1:exon
so has part: feature:1155165-1155268:1:exon
so has part: feature:1155613-1155744:1:exon
so has part: feature:1156404-1156452:1:exon
so has part: feature:1157292-1157398:1:exon
so has part: feature:1157723-1157854:1:exon
so has part: feature:1158527-1158637:1:exon
so has part: feature:1159099-1159226:1:exon
so has part: feature:1159681-1159851:1:exon
so has part: feature:1160568-1160722:1:exon
so has part: feature:1162867-1163045:1:exon
so has part: feature:1163665-1163750:1:exon
so has part: feature:1164500-1164598:1:exon
so has part: feature:1164857-1165098:1:exon
so has part: feature:1167163-1167437:1:exon
so has part: feature:1167676-1167776:1:exon
so has part: feature:1167968-1168148:1:exon

XP_010720548.1
type: Protein
SIO_000068: ncbiprotein

position:1134135:1
position: 1134135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168148:1
position: 1168148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134135-1134213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1134309-1134364:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1135714-1135802:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137059-1137158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1138173-1138264:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1138856-1138897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1138999-1139166:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1139436-1139496:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1140355-1140486:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1140636-1140698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1141328-1141412:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1141681-1141840:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1141994-1142177:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1142751-1142937:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1143124-1143488:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1144091-1144199:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1144945-1145143:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1145837-1145957:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1146510-1146610:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1147164-1147251:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1148273-1148389:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1149514-1149666:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1149897-1150080:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1150639-1150763:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1151156-1151290:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1152397-1152570:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1152725-1152841:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1153164-1153325:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1154003-1154165:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1155165-1155268:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1155613-1155744:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1156404-1156452:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1157292-1157398:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1157723-1157854:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1158527-1158637:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1159099-1159226:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1159681-1159851:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1160568-1160722:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1162867-1163045:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1163665-1163750:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1164500-1164598:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1164857-1165098:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1167163-1167437:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1167676-1167776:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1167968-1168148:1:exon

LOC100540406
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100540406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1170068..1190979
location: region:1170068-1190979:1
so has part: feature:1170068-1190979:1:exon
subclass of: SO_0000010

100540406
type: Gene
SIO_000068: ncbigene

position:1170068:1
position: 1170068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190979:1
position: 1190979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170068-1190979:1:exon

LOC100540406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100540406
product: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010722249.3
SIO_010081: LOC100540406
subclass of: SO_0000673
so part of: LOC100540406
location: join(1170068..1170232,1172706..1172778,1173006..1173151,1174117..1174191,1175234..1175283,1175398..1175527,1175980..1176065,1176952..1177027,1178169..1178255,1178363..1178463,1179526..1179595,1180131..1180218,1180593..1180641,1180938..1181101,1181237..1181370,1181959..1182050,1183810..1183987,1184552..1184637,1184957..1185072,1186470..1186537,1186966..1187073,1187239..1187407,1188015..1188185,1188438..1188583,1189066..1189188,1190864..1190979)
location: region:1170068-1190979:1
so has part: feature:1170068-1170232:1:exon
so has part: feature:1172706-1172778:1:exon
so has part: feature:1173006-1173151:1:exon
so has part: feature:1174117-1174191:1:exon
so has part: feature:1175234-1175283:1:exon
so has part: feature:1175398-1175527:1:exon
so has part: feature:1175980-1176065:1:exon
so has part: feature:1176952-1177027:1:exon
so has part: feature:1178169-1178255:1:exon
so has part: feature:1178363-1178463:1:exon
so has part: feature:1179526-1179595:1:exon
so has part: feature:1180131-1180218:1:exon
so has part: feature:1180593-1180641:1:exon
so has part: feature:1180938-1181101:1:exon
so has part: feature:1181237-1181370:1:exon
so has part: feature:1181959-1182050:1:exon
so has part: feature:1183810-1183987:1:exon
so has part: feature:1184552-1184637:1:exon
so has part: feature:1184957-1185072:1:exon
so has part: feature:1186470-1186537:1:exon
so has part: feature:1186966-1187073:1:exon
so has part: feature:1187239-1187407:1:exon
so has part: feature:1188015-1188185:1:exon
so has part: feature:1188438-1188583:1:exon
so has part: feature:1189066-1189188:1:exon
so has part: feature:1190864-1190979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1170068-1170232:1:exon

position:1170232:1
position: 1170232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1172706-1172778:1:exon

position:1172706:1
position: 1172706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1172778:1
position: 1172778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1173006-1173151:1:exon

position:1173006:1
position: 1173006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173151:1
position: 1173151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1174117-1174191:1:exon

position:1174117:1
position: 1174117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174191:1
position: 1174191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1175234-1175283:1:exon

position:1175234:1
position: 1175234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175283:1
position: 1175283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1175398-1175527:1:exon

position:1175398:1
position: 1175398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175527:1
position: 1175527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1175980-1176065:1:exon

position:1175980:1
position: 1175980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176065:1
position: 1176065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1176952-1177027:1:exon

position:1176952:1
position: 1176952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177027:1
position: 1177027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1178169-1178255:1:exon

position:1178169:1
position: 1178169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178255:1
position: 1178255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1178363-1178463:1:exon

position:1178363:1
position: 1178363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178463:1
position: 1178463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1179526-1179595:1:exon

position:1179526:1
position: 1179526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179595:1
position: 1179595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1180131-1180218:1:exon

position:1180131:1
position: 1180131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180218:1
position: 1180218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1180593-1180641:1:exon

position:1180593:1
position: 1180593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180641:1
position: 1180641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1180938-1181101:1:exon

position:1180938:1
position: 1180938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181101:1
position: 1181101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1181237-1181370:1:exon

position:1181237:1
position: 1181237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181370:1
position: 1181370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1181959-1182050:1:exon

position:1181959:1
position: 1181959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182050:1
position: 1182050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1183810-1183987:1:exon

position:1183810:1
position: 1183810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1183987:1
position: 1183987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1184552-1184637:1:exon

position:1184552:1
position: 1184552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184637:1
position: 1184637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1184957-1185072:1:exon

position:1184957:1
position: 1184957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1185072:1
position: 1185072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1186470-1186537:1:exon

position:1186470:1
position: 1186470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186537:1
position: 1186537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1186966-1187073:1:exon

position:1186966:1
position: 1186966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187073:1
position: 1187073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1187239-1187407:1:exon

position:1187239:1
position: 1187239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1187407:1
position: 1187407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1188015-1188185:1:exon

position:1188015:1
position: 1188015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188185:1
position: 1188185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1188438-1188583:1:exon

position:1188438:1
position: 1188438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1188583:1
position: 1188583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1189066-1189188:1:exon

position:1189066:1
position: 1189066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189188:1
position: 1189188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1190864-1190979:1:exon

position:1190864:1
position: 1190864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100540406
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100540406
product: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_031556514.1
SIO_010081: LOC100540406
subclass of: SO_0000673
so part of: LOC100540406
location: join(1170069..1170232,1172706..1172778,1173006..1173151,1174117..1174191,1175234..1175283,1175398..1175527,1175980..1176065,1176952..1177027,1178169..1178255,1178363..1178463,1179526..1179595,1180131..1180218,1180593..1180641,1180938..1181101,1181237..1181370,1181959..1182050,1183810..1183987,1184552..1184637,1184957..1185072,1186470..1186537,1186966..1187073,1187203..1187407,1188015..1188185,1188438..1188583,1189066..1189188,1190864..1190979)
location: region:1170069-1190979:1
so has part: feature:1170069-1170232:1:exon
so has part: feature:1172706-1172778:1:exon
so has part: feature:1173006-1173151:1:exon
so has part: feature:1174117-1174191:1:exon
so has part: feature:1175234-1175283:1:exon
so has part: feature:1175398-1175527:1:exon
so has part: feature:1175980-1176065:1:exon
so has part: feature:1176952-1177027:1:exon
so has part: feature:1178169-1178255:1:exon
so has part: feature:1178363-1178463:1:exon
so has part: feature:1179526-1179595:1:exon
so has part: feature:1180131-1180218:1:exon
so has part: feature:1180593-1180641:1:exon
so has part: feature:1180938-1181101:1:exon
so has part: feature:1181237-1181370:1:exon
so has part: feature:1181959-1182050:1:exon
so has part: feature:1183810-1183987:1:exon
so has part: feature:1184552-1184637:1:exon
so has part: feature:1184957-1185072:1:exon
so has part: feature:1186470-1186537:1:exon
so has part: feature:1186966-1187073:1:exon
so has part: feature:1187203-1187407:1:exon
so has part: feature:1188015-1188185:1:exon
so has part: feature:1188438-1188583:1:exon
so has part: feature:1189066-1189188:1:exon
so has part: feature:1190864-1190979:1:exon

position:1170069:1
position: 1170069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170069-1170232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172706-1172778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173006-1173151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1174117-1174191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1175234-1175283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1175398-1175527:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1175980-1176065:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1176952-1177027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178169-1178255:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1178363-1178463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1179526-1179595:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1180131-1180218:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1180593-1180641:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180938-1181101:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1181237-1181370:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1181959-1182050:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1183810-1183987:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1184552-1184637:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1184957-1185072:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1186470-1186537:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1186966-1187073:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1187203-1187407:1:exon

position:1187203:1
position: 1187203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1188015-1188185:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1188438-1188583:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1189066-1189188:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1190864-1190979:1:exon

LOC100540406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100540406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like isoform X1
translation: MAAPILVCDFVKQVQEDLSSPTTSTFTSHMGRCKATASSMEEALDADRAVLQKMKKAAKAEHGCGQDLISHLAAHIAAQELFSANYQLEGEEQLANAFSTFAAFSQELLIAVRSLLQSLDHNINFSLESLIKGDMKEIKGEFKKPLEKAYKDYESKLTKIEKEKRELAKQHGMVRGEVSGGEIAEEMEKERRTFQLNMCEYLIKVNEIKTKKGIDLLQNHIKHCNSQFNFFQECLNTTAKLKKFTEELIPELQSLKVRQDEEKKQLCALRDQLKAALQLEQREDLGSKQARYNMHQLQGNKQYGTEKMGTLFKKSDGLRKVWQKRKCTVSNGYLTISHSMSNRPPAKLNLLTCQVKPNVDDKKCFDLVSHNRTYRFLAEDEQDCFVWVSVLSNSKEEALNVAFSKAQGGGESSREELTRAIVEEVRNMPGNRECCDCLAPDPTWLSINHGILICIECSGIHREMGVHISRIQSLSLDKLATSELLLARNIGNAGFNGIMEASLSSFSPKPVAHSDMALRKEFIISKYVEKKYAKRSPAAQCPSLPEAVKGKDIFTLLQAYAENVDLSKPVQAHLQEPGETILHLAVLLSDRTSLHIVDFLVQNSGSLEKQTIVGNTPLHYCCFHNKPECLKLLLKAKANITITNQAGETALDIAKRTRHHQCEELLLQAQNNQFSPHVHVEYEWWLGQDDMYESDDELDEKLGLMKRGSSCPQSCSQPPATAIRPEAAGAVPQGRRPDTYALPHTHLRSLDVPPAPSYPPPFPPHRAKSAPERTRPLLTSSSVFAEDTRTRRSPSLPLSTKHKRTSSDPAPWVPLSPEKPNLGLASGALMAMDCLYASVSRKAGQPGPHQSPQESDPSSGSAFNVPPPLPRRGSSNTLLFRRVRALYDCSADREDELTFHAGEIIVVSEKEDDNWWKGWIEGQPHRQGAFPASFVHVLNE
SIO_010081: LOC100540406
subclass of: SO_0000673
so part of: LOC100540406
location: join(1170107..1170232,1172706..1172778,1173006..1173151,1174117..1174191,1175234..1175283,1175398..1175527,1175980..1176065,1176952..1177027,1178169..1178255,1178363..1178463,1179526..1179595,1180131..1180218,1180593..1180641,1180938..1181101,1181237..1181370,1181959..1182050,1183810..1183987,1184552..1184637,1184957..1185072,1186470..1186537,1186966..1187073,1187203..1187407,1188015..1188185,1188438..1188583,1189066..1189188,1190864..1190938)
location: region:1170107-1190938:1
so has part: feature:1170107-1170232:1:exon
so has part: feature:1172706-1172778:1:exon
so has part: feature:1173006-1173151:1:exon
so has part: feature:1174117-1174191:1:exon
so has part: feature:1175234-1175283:1:exon
so has part: feature:1175398-1175527:1:exon
so has part: feature:1175980-1176065:1:exon
so has part: feature:1176952-1177027:1:exon
so has part: feature:1178169-1178255:1:exon
so has part: feature:1178363-1178463:1:exon
so has part: feature:1179526-1179595:1:exon
so has part: feature:1180131-1180218:1:exon
so has part: feature:1180593-1180641:1:exon
so has part: feature:1180938-1181101:1:exon
so has part: feature:1181237-1181370:1:exon
so has part: feature:1181959-1182050:1:exon
so has part: feature:1183810-1183987:1:exon
so has part: feature:1184552-1184637:1:exon
so has part: feature:1184957-1185072:1:exon
so has part: feature:1186470-1186537:1:exon
so has part: feature:1186966-1187073:1:exon
so has part: feature:1187203-1187407:1:exon
so has part: feature:1188015-1188185:1:exon
so has part: feature:1188438-1188583:1:exon
so has part: feature:1189066-1189188:1:exon
so has part: feature:1190864-1190938:1:exon

XP_031412374.1
type: Protein
SIO_000068: ncbiprotein

position:1170107:1
position: 1170107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1190938:1
position: 1190938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1170107-1170232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172706-1172778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173006-1173151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1174117-1174191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1175234-1175283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1175398-1175527:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1175980-1176065:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1176952-1177027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178169-1178255:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1178363-1178463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1179526-1179595:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1180131-1180218:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1180593-1180641:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180938-1181101:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1181237-1181370:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1181959-1182050:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1183810-1183987:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1184552-1184637:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1184957-1185072:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1186470-1186537:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1186966-1187073:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1187203-1187407:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1188015-1188185:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1188438-1188583:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1189066-1189188:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1190864-1190938:1:exon

LOC100540406
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100540406
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like isoform X2
translation: MAAPILVCDFVKQVQEDLSSPTTSTFTSHMGRCKATASSMEEALDADRAVLQKMKKAAKAEHGCGQDLISHLAAHIAAQELFSANYQLEGEEQLANAFSTFAAFSQELLIAVRSLLQSLDHNINFSLESLIKGDMKEIKGEFKKPLEKAYKDYESKLTKIEKEKRELAKQHGMVRGEVSGGEIAEEMEKERRTFQLNMCEYLIKVNEIKTKKGIDLLQNHIKHCNSQFNFFQECLNTTAKLKKFTEELIPELQSLKVRQDEEKKQLCALRDQLKAALQLEQREDLGSKQARYNMHQLQGNKQYGTEKMGTLFKKSDGLRKVWQKRKCTVSNGYLTISHSMSNRPPAKLNLLTCQVKPNVDDKKCFDLVSHNRTYRFLAEDEQDCFVWVSVLSNSKEEALNVAFSKAQGGGESSREELTRAIVEEVRNMPGNRECCDCLAPDPTWLSINHGILICIECSGIHREMGVHISRIQSLSLDKLATSELLLARNIGNAGFNGIMEASLSSFSPKPVAHSDMALRKEFIISKYVEKKYAKRSPAAQCPSLPEAVKGKDIFTLLQAYAENVDLSKPVQAHLQEPGETILHLAVLLSDRTSLHIVDFLVQNSGSLEKQTIVGNTPLHYCCFHNKPECLKLLLKAKANITITNQAGETALDIAKRTRHHQCEELLLQAQNNQFSPHVHVEYEWWLGQDDMYESDDELDEKSCSQPPATAIRPEAAGAVPQGRRPDTYALPHTHLRSLDVPPAPSYPPPFPPHRAKSAPERTRPLLTSSSVFAEDTRTRRSPSLPLSTKHKRTSSDPAPWVPLSPEKPNLGLASGALMAMDCLYASVSRKAGQPGPHQSPQESDPSSGSAFNVPPPLPRRGSSNTLLFRRVRALYDCSADREDELTFHAGEIIVVSEKEDDNWWKGWIEGQPHRQGAFPASFVHVLNE
SIO_010081: LOC100540406
subclass of: SO_0000673
so part of: LOC100540406
location: join(1170107..1170232,1172706..1172778,1173006..1173151,1174117..1174191,1175234..1175283,1175398..1175527,1175980..1176065,1176952..1177027,1178169..1178255,1178363..1178463,1179526..1179595,1180131..1180218,1180593..1180641,1180938..1181101,1181237..1181370,1181959..1182050,1183810..1183987,1184552..1184637,1184957..1185072,1186470..1186537,1186966..1187073,1187239..1187407,1188015..1188185,1188438..1188583,1189066..1189188,1190864..1190938)
location: region:1170107-1190938:1
so has part: feature:1170107-1170232:1:exon
so has part: feature:1172706-1172778:1:exon
so has part: feature:1173006-1173151:1:exon
so has part: feature:1174117-1174191:1:exon
so has part: feature:1175234-1175283:1:exon
so has part: feature:1175398-1175527:1:exon
so has part: feature:1175980-1176065:1:exon
so has part: feature:1176952-1177027:1:exon
so has part: feature:1178169-1178255:1:exon
so has part: feature:1178363-1178463:1:exon
so has part: feature:1179526-1179595:1:exon
so has part: feature:1180131-1180218:1:exon
so has part: feature:1180593-1180641:1:exon
so has part: feature:1180938-1181101:1:exon
so has part: feature:1181237-1181370:1:exon
so has part: feature:1181959-1182050:1:exon
so has part: feature:1183810-1183987:1:exon
so has part: feature:1184552-1184637:1:exon
so has part: feature:1184957-1185072:1:exon
so has part: feature:1186470-1186537:1:exon
so has part: feature:1186966-1187073:1:exon
so has part: feature:1187239-1187407:1:exon
so has part: feature:1188015-1188185:1:exon
so has part: feature:1188438-1188583:1:exon
so has part: feature:1189066-1189188:1:exon
so has part: feature:1190864-1190938:1:exon

XP_010720551.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1170107-1170232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1172706-1172778:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1173006-1173151:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1174117-1174191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1175234-1175283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1175398-1175527:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1175980-1176065:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1176952-1177027:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1178169-1178255:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1178363-1178463:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1179526-1179595:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1180131-1180218:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1180593-1180641:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1180938-1181101:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1181237-1181370:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1181959-1182050:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1183810-1183987:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1184552-1184637:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1184957-1185072:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1186470-1186537:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1186966-1187073:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1187239-1187407:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1188015-1188185:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1188438-1188583:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1189066-1189188:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1190864-1190938:1:exon

LOC100540561
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100540561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1194209..1197068
location: region:1194209-1197068:1
so has part: feature:1194209-1197068:1:exon
subclass of: SO_0000010

100540561
type: Gene
SIO_000068: ncbigene

position:1194209:1
position: 1194209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1197068:1
position: 1197068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194209-1197068:1:exon

LOC100540561
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100540561
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 191 samples with support for all annotated introns
transcript id: XM_031556515.1
SIO_010081: LOC100540561
subclass of: SO_0000673
so part of: LOC100540561
location: join(1194209..1194457,1194614..1194804,1194935..1195114,1195447..1195492,1195778..1195897,1196331..1197068)
location: region:1194209-1197068:1
so has part: feature:1194209-1194457:1:exon
so has part: feature:1194614-1194804:1:exon
so has part: feature:1194935-1195114:1:exon
so has part: feature:1195447-1195492:1:exon
so has part: feature:1195778-1195897:1:exon
so has part: feature:1196331-1197068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194209-1194457:1:exon

position:1194457:1
position: 1194457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1194614-1194804:1:exon

position:1194614:1
position: 1194614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1194804:1
position: 1194804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1194935-1195114:1:exon

position:1194935:1
position: 1194935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195114:1
position: 1195114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1195447-1195492:1:exon

position:1195447:1
position: 1195447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195492:1
position: 1195492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1195778-1195897:1:exon

position:1195778:1
position: 1195778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1195897:1
position: 1195897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1196331-1197068:1:exon

position:1196331:1
position: 1196331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100540561
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100540561
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 2-like
translation: MRCRKRTLLVLALCLPLGLWLLFRASVSGLGLPPSLPTVSCTASFNASAWFSARYDAAVGPLLTGPAHELSPDVVRWWLTLQGSPGIAPLQAIIQKLFAVLPAPNGSVWDPSRCRTCAVVGNSGRLKGSRHGPQIDAHHWVLRMNRAKTAGFEVDVGARTTHHFMYPESAMNLWPGIHLVLVPFKPLDLKWVTSAFSTGELTHTYTRVKQFIKADRSKVLILSPAFLKYIHENWTEHHGRYPSTGFTALLFALHACQQVSVFGFGADSKGNWHHYWEENRWSGAFRRTRVHDADVEFSLIQRLAAEGRILFYQ
SIO_010081: LOC100540561
subclass of: SO_0000673
so part of: LOC100540561
location: join(1194221..1194457,1194614..1194804,1194935..1195114,1195447..1195492,1195778..1195897,1196331..1196498)
location: region:1194221-1196498:1
so has part: feature:1194221-1194457:1:exon
so has part: feature:1194614-1194804:1:exon
so has part: feature:1194935-1195114:1:exon
so has part: feature:1195447-1195492:1:exon
so has part: feature:1195778-1195897:1:exon
so has part: feature:1196331-1196498:1:exon

XP_031412375.1
type: Protein
SIO_000068: ncbiprotein

position:1194221:1
position: 1194221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196498:1
position: 1196498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1194221-1194457:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1194614-1194804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1194935-1195114:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1195447-1195492:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1195778-1195897:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196331-1196498:1:exon

ERGIC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ERGIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1198031..1221788)
location: region:1198031-1221788:-1
so has part: feature:1198031-1221788:-1:exon
subclass of: SO_0000010

100540716
type: Gene
SIO_000068: ncbigene

position:1198031:-1
position: 1198031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221788:-1
position: 1221788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198031-1221788:-1:exon

ERGIC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ERGIC3
product: ERGIC and golgi 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_010722250.2
SIO_010081: ERGIC3
subclass of: SO_0000673
so part of: ERGIC3
location: complement(join(1198031..1198893,1200705..1200760,1201740..1201876,1205547..1205611,1206879..1206975,1207577..1207608,1217433..1217490,1218268..1218433,1219506..1219599,1220687..1220806,1221562..1221649,1221727..1221788))
location: region:1198031-1221788:-1
so has part: feature:1221727-1221788:-1:exon
so has part: feature:1221562-1221649:-1:exon
so has part: feature:1220687-1220806:-1:exon
so has part: feature:1219506-1219599:-1:exon
so has part: feature:1218268-1218433:-1:exon
so has part: feature:1217433-1217490:-1:exon
so has part: feature:1207577-1207608:-1:exon
so has part: feature:1206879-1206975:-1:exon
so has part: feature:1205547-1205611:-1:exon
so has part: feature:1201740-1201876:-1:exon
so has part: feature:1200705-1200760:-1:exon
so has part: feature:1198031-1198893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1221727-1221788:-1:exon

position:1221727:-1
position: 1221727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1221562-1221649:-1:exon

position:1221562:-1
position: 1221562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221649:-1
position: 1221649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1220687-1220806:-1:exon

position:1220687:-1
position: 1220687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220806:-1
position: 1220806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1219506-1219599:-1:exon

position:1219506:-1
position: 1219506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219599:-1
position: 1219599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1218268-1218433:-1:exon

position:1218268:-1
position: 1218268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218433:-1
position: 1218433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1217433-1217490:-1:exon

position:1217433:-1
position: 1217433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217490:-1
position: 1217490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1207577-1207608:-1:exon

position:1207577:-1
position: 1207577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1207608:-1
position: 1207608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1206879-1206975:-1:exon

position:1206879:-1
position: 1206879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206975:-1
position: 1206975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1205547-1205611:-1:exon

position:1205547:-1
position: 1205547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1205611:-1
position: 1205611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1201740-1201876:-1:exon

position:1201740:-1
position: 1201740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1201876:-1
position: 1201876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1200705-1200760:-1:exon

position:1200705:-1
position: 1200705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1200760:-1
position: 1200760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1198031-1198893:-1:exon

position:1198893:-1
position: 1198893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERGIC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ERGIC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum-Golgi intermediate compartment protein 3
translation: MVLLFFSELQYYLTKEVHPELYVDKSRGDKLKINIDVVFPHMPCAYLSIDAMDVAGEQQLDVEHNLFKQRLDKAGNRVTPEAERHELGKEEEKVFDPNSLDADRCESCYGAESEDIRCCNTCDDVREAYRRRGWAFKNPDTIEQCKREGFSQKMQEQKNEGCQVYGFLEVNKVAGNFHFAPGKSFQQSHVHVHDLQSFGLDNINMTHYIKHLSFGRDYPGIVNPLDGTDVTAQQASMMFQYFVKVVPTVYMKVDGEVVRTNQFSVTRHEKIANGLIGDQGLPGVFVLYELSPMMVKLTEKHRPFTHFLTGVCAIVGGIFTVAGFIDSLIYHSARAIQKKIELGKTI
SIO_010081: ERGIC3
subclass of: SO_0000673
so part of: ERGIC3
location: complement(join(1198814..1198893,1200705..1200760,1201740..1201876,1205547..1205611,1206879..1206975,1207577..1207608,1217433..1217490,1218268..1218433,1219506..1219599,1220687..1220806,1221562..1221649,1221727..1221774))
location: region:1198814-1221774:-1
so has part: feature:1221727-1221774:-1:exon
so has part: feature:1221562-1221649:-1:exon
so has part: feature:1220687-1220806:-1:exon
so has part: feature:1219506-1219599:-1:exon
so has part: feature:1218268-1218433:-1:exon
so has part: feature:1217433-1217490:-1:exon
so has part: feature:1207577-1207608:-1:exon
so has part: feature:1206879-1206975:-1:exon
so has part: feature:1205547-1205611:-1:exon
so has part: feature:1201740-1201876:-1:exon
so has part: feature:1200705-1200760:-1:exon
so has part: feature:1198814-1198893:-1:exon

XP_010720552.1
type: Protein
SIO_000068: ncbiprotein

position:1198814:-1
position: 1198814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221774:-1
position: 1221774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1221727-1221774:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221562-1221649:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220687-1220806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1219506-1219599:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1218268-1218433:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217433-1217490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1207577-1207608:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1206879-1206975:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1205547-1205611:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1201740-1201876:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1200705-1200760:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1198814-1198893:-1:exon

CEP250
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CEP250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1225357..1257787)
location: region:1225357-1257787:-1
so has part: feature:1225357-1257787:-1:exon
subclass of: SO_0000010

100540869
type: Gene
SIO_000068: ncbigene

position:1225357:-1
position: 1225357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257787:-1
position: 1257787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225357-1257787:-1:exon

CEP250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CEP250
product: centrosomal protein 250
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 67 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556593.1
SIO_010081: CEP250
subclass of: SO_0000673
so part of: CEP250
location: complement(join(1225357..1225970,1227671..1227718,1227889..1228002,1228418..1228573,1229230..1232483,1233544..1233698,1235371..1235491,1235751..1235878,1236266..1236590,1237359..1237518,1240345..1240646,1241075..1241218,1241519..1241653,1242728..1242907,1243661..1243830,1244000..1244127,1246655..1246848,1248365..1248595,1248772..1248918,1249202..1249346,1250222..1250404,1250630..1250808,1251116..1251277,1252268..1252366,1252782..1252878,1253386..1253613,1254298..1254404,1255036..1255201,1256397..1256479,1257114..1257257,1257758..1257787))
location: region:1225357-1257787:-1
so has part: feature:1257758-1257787:-1:exon
so has part: feature:1257114-1257257:-1:exon
so has part: feature:1256397-1256479:-1:exon
so has part: feature:1255036-1255201:-1:exon
so has part: feature:1254298-1254404:-1:exon
so has part: feature:1253386-1253613:-1:exon
so has part: feature:1252782-1252878:-1:exon
so has part: feature:1252268-1252366:-1:exon
so has part: feature:1251116-1251277:-1:exon
so has part: feature:1250630-1250808:-1:exon
so has part: feature:1250222-1250404:-1:exon
so has part: feature:1249202-1249346:-1:exon
so has part: feature:1248772-1248918:-1:exon
so has part: feature:1248365-1248595:-1:exon
so has part: feature:1246655-1246848:-1:exon
so has part: feature:1244000-1244127:-1:exon
so has part: feature:1243661-1243830:-1:exon
so has part: feature:1242728-1242907:-1:exon
so has part: feature:1241519-1241653:-1:exon
so has part: feature:1241075-1241218:-1:exon
so has part: feature:1240345-1240646:-1:exon
so has part: feature:1237359-1237518:-1:exon
so has part: feature:1236266-1236590:-1:exon
so has part: feature:1235751-1235878:-1:exon
so has part: feature:1235371-1235491:-1:exon
so has part: feature:1233544-1233698:-1:exon
so has part: feature:1229230-1232483:-1:exon
so has part: feature:1228418-1228573:-1:exon
so has part: feature:1227889-1228002:-1:exon
so has part: feature:1227671-1227718:-1:exon
so has part: feature:1225357-1225970:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1257758-1257787:-1:exon

position:1257758:-1
position: 1257758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1257114-1257257:-1:exon

position:1257114:-1
position: 1257114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257257:-1
position: 1257257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1256397-1256479:-1:exon

position:1256397:-1
position: 1256397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256479:-1
position: 1256479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1255036-1255201:-1:exon

position:1255036:-1
position: 1255036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1255201:-1
position: 1255201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1254298-1254404:-1:exon

position:1254298:-1
position: 1254298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1254404:-1
position: 1254404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1253386-1253613:-1:exon

position:1253386:-1
position: 1253386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253613:-1
position: 1253613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1252782-1252878:-1:exon

position:1252782:-1
position: 1252782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252878:-1
position: 1252878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1252268-1252366:-1:exon

position:1252268:-1
position: 1252268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1252366:-1
position: 1252366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1251116-1251277:-1:exon

position:1251116:-1
position: 1251116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1251277:-1
position: 1251277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1250630-1250808:-1:exon

position:1250630:-1
position: 1250630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250808:-1
position: 1250808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1250222-1250404:-1:exon

position:1250222:-1
position: 1250222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1250404:-1
position: 1250404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1249202-1249346:-1:exon

position:1249202:-1
position: 1249202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1249346:-1
position: 1249346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1248772-1248918:-1:exon

position:1248772:-1
position: 1248772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248918:-1
position: 1248918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1248365-1248595:-1:exon

position:1248365:-1
position: 1248365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1248595:-1
position: 1248595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1246655-1246848:-1:exon

position:1246655:-1
position: 1246655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1246848:-1
position: 1246848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1244000-1244127:-1:exon

position:1244000:-1
position: 1244000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244127:-1
position: 1244127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1243661-1243830:-1:exon

position:1243661:-1
position: 1243661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243830:-1
position: 1243830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1242728-1242907:-1:exon

position:1242728:-1
position: 1242728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242907:-1
position: 1242907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1241519-1241653:-1:exon

position:1241519:-1
position: 1241519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241653:-1
position: 1241653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1241075-1241218:-1:exon

position:1241075:-1
position: 1241075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241218:-1
position: 1241218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1240345-1240646:-1:exon

position:1240345:-1
position: 1240345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240646:-1
position: 1240646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1237359-1237518:-1:exon

position:1237359:-1
position: 1237359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1237518:-1
position: 1237518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1236266-1236590:-1:exon

position:1236266:-1
position: 1236266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1236590:-1
position: 1236590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1235751-1235878:-1:exon

position:1235751:-1
position: 1235751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235878:-1
position: 1235878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1235371-1235491:-1:exon

position:1235371:-1
position: 1235371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1235491:-1
position: 1235491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1233544-1233698:-1:exon

position:1233544:-1
position: 1233544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1233698:-1
position: 1233698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1229230-1232483:-1:exon

position:1229230:-1
position: 1229230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1232483:-1
position: 1232483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1228418-1228573:-1:exon

position:1228418:-1
position: 1228418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228573:-1
position: 1228573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1227889-1228002:-1:exon

position:1227889:-1
position: 1227889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1228002:-1
position: 1228002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1227671-1227718:-1:exon

position:1227671:-1
position: 1227671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1227718:-1
position: 1227718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1225357-1225970:-1:exon

position:1225970:-1
position: 1225970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CEP250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CEP250
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: centrosome-associated protein CEP250
translation: MDAPSLDIFERKANAGGAESVRSFISLILILFPSQLLQYRSWCRELEQRLEAGGVNVQGSLSDRWETTEHRALEKALLRLEEEQQRCENLAKMNTLLREHLDKANEVNLALKEDVGKLTADWMRAREELELKESEWRSEREFHDNYLRGEHNRLLSLWRQVLTFRRHFLEMKTATDRDLSELKAEQMRLSGSILVSCFRLNSGAQLWESVTLSRPVPKDQTQQQVEREIDQKALEVMCLQVNGDQEKKELEDRVMELSALLVQSQKQNEEKEKTVKTLNDTVEMLEASRLEVEYEASLTKNAKEENLALQKLIKEITEVVLNDSDSKINIVHTDSSQRPESSNILSCLSSLDAEHAFVLVQETLARRQRATQALKEELSAKQDSINFLQHQHRQQEEKCEKLQQRLEQLEEENKVSSSHQQHLESLVQALKNDCENLEKIRGELQQKLEFSEQEASHLRRSNTELQLKEDSAQGEKVEQQLAMERAHHDHELLLKDLAALEAKHSLLQSELIAAREKLEESHLQRGLLKQEKHELTVALEKAEKSVAALTGAQNKLNSEIADLRVATAKMSSINEALALDKVELNKLVLQLEQENELLSDKVNEMERAKDSEQEKMTLYKRTNEELCAEKSHLEELLKKAEEQQEGLQMQLRVLAEEKEETQEKLNQVYRQQESASSGLEQLRQQSSRQEDAVAKVSKEKEFLVHEKAALEVRLAAVERDRQGLSEQLAEARSAKDTLESSLFEAQQHSSHLEITKSQLEIQLHTIIQAKEVIQGEVMCLQYELETERSLMKQERENMAQRLIQIEQQHNNTLKLQQTDHEVEINKLLQDLASEREGRHLELQEMLELWEKEKAETEGQHEKKLFHMKEKVATMQVQQEEERTRFESANQEILTEKENEKKALLETLLQTQGELTAACHQLEQLRQEVKEQQEYEQNITEKLQAELQEAHCKIKMVENMHKEEIENIREEKNIFLQQRDDLQKQVEELTSQLAASEESHQAIGHKAQQDLSEAQELSRQKVLEVVHLQKILEEERGQWEEVEHQNKELQVCLQSLEGEKSRWEEVERHNTEFQASLKALESERDRLSLSLEQKELCLKTLEENNLVQQNEVSKLHSAIQQAQQLHSDHRREIQELNSQVQTLQEVVLEKEASLAAREKQLLRDLEESQAGERCLRDSLHVLEAEMAELHLRLCSTENRAKALATECQQANNAHCEARSQLDKLHLVLHHVLCDSTEKSRDLVTWSSEQDRVWNLTVSQAKDLPVELMVDRVAAALQDLRQDLKQTQQDLNDAGKKVQDLELELSKRQAERDHFSACNQELQKQLAQSQEETQMAEGKKNFLQAALQAEAAALKKEAMTLHQEVASLERKLESTEKQKKDVLHERDRLQAVEEKLMWEINLLQESITASETRANTAADMNHSLEQELQTTLSVLQXKNKEVDTQREKIQVLQKEAADVKALQENLTQMNAILSKREGEMKFYQEQMRMLESQKEMHKTTLDQVIKDIKEKKQKTESQQEQIQELEKQQELQRTAISKMSKDLEDRDKKIRSQQEEIWELEKQQELQRTAIGKMTKDLAHRDQEITSQQEEIRELEKQRELQRAAASKMSKDLKEKDGKIRSQQELIEELEKQQELQRTALGKMSKNLEERDQKIRSQQELIEELEKHQEMQRNVVNKMNKDLEERDGNVSSQQELIEELEKHQELQRAAVNKMNKDLEERDEKIRSQQELIEELEKQQELQKTVVSKMSKNLEDRDQKIKSLQELIEELEKQREMQRSAVSKMSQDLEERDQEIKSQQEEIQELEKQRELQRTVVSKMSKDLEERDQMIKFQEGKLIILEQHGTSQVRSLLVDLDQLKGNLKEKNLELMSLNQQIKELEMEREEVKSLHTSLEQLRADLRDRENESDSQRDQLRFFQQYKEHQEEYLQELQDKVEKMTLSLSKKDQELESQQKQIQEAEEVMEKKLKIVCDQLEQTLETLNEKERLLDIQKQQTREYEGKT…
SIO_010081: CEP250
subclass of: SO_0000673
so part of: CEP250
location: complement(join(1225683..1225970,1227671..1227718,1227889..1228002,1228418..1228573,1229230..1232483,1233544..1233698,1235371..1235491,1235751..1235878,1236266..1236590,1237359..1237518,1240345..1240646,1241075..1241218,1241519..1241653,1242728..1242907,1243661..1243830,1244000..1244127,1246655..1246848,1248365..1248595,1248772..1248918,1249202..1249346,1250222..1250404,1250630..1250808,1251116..1251277,1252268..1252366,1252782..1252878,1253386..1253613,1254298..1254404,1255036..1255201,1256397..1256479,1257114..1257257,1257758..1257787))
location: region:1225683-1257787:-1
so has part: feature:1257758-1257787:-1:exon
so has part: feature:1257114-1257257:-1:exon
so has part: feature:1256397-1256479:-1:exon
so has part: feature:1255036-1255201:-1:exon
so has part: feature:1254298-1254404:-1:exon
so has part: feature:1253386-1253613:-1:exon
so has part: feature:1252782-1252878:-1:exon
so has part: feature:1252268-1252366:-1:exon
so has part: feature:1251116-1251277:-1:exon
so has part: feature:1250630-1250808:-1:exon
so has part: feature:1250222-1250404:-1:exon
so has part: feature:1249202-1249346:-1:exon
so has part: feature:1248772-1248918:-1:exon
so has part: feature:1248365-1248595:-1:exon
so has part: feature:1246655-1246848:-1:exon
so has part: feature:1244000-1244127:-1:exon
so has part: feature:1243661-1243830:-1:exon
so has part: feature:1242728-1242907:-1:exon
so has part: feature:1241519-1241653:-1:exon
so has part: feature:1241075-1241218:-1:exon
so has part: feature:1240345-1240646:-1:exon
so has part: feature:1237359-1237518:-1:exon
so has part: feature:1236266-1236590:-1:exon
so has part: feature:1235751-1235878:-1:exon
so has part: feature:1235371-1235491:-1:exon
so has part: feature:1233544-1233698:-1:exon
so has part: feature:1229230-1232483:-1:exon
so has part: feature:1228418-1228573:-1:exon
so has part: feature:1227889-1228002:-1:exon
so has part: feature:1227671-1227718:-1:exon
so has part: feature:1225683-1225970:-1:exon

XP_031412453.1
type: Protein
SIO_000068: ncbiprotein

position:1225683:-1
position: 1225683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1257758-1257787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1257114-1257257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1256397-1256479:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1255036-1255201:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1254298-1254404:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1253386-1253613:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1252782-1252878:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1252268-1252366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1251116-1251277:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1250630-1250808:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1250222-1250404:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1249202-1249346:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1248772-1248918:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1248365-1248595:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1246655-1246848:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1244000-1244127:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1243661-1243830:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1242728-1242907:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1241519-1241653:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1241075-1241218:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1240345-1240646:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1237359-1237518:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1236266-1236590:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1235751-1235878:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1235371-1235491:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1233544-1233698:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1229230-1232483:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1228418-1228573:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1227889-1228002:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1227671-1227718:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1225683-1225970:-1:exon

GDF5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GDF5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1261340..1269638
location: region:1261340-1269638:1
so has part: feature:1261340-1269638:1:exon
subclass of: SO_0000010

100550309
type: Gene
SIO_000068: ncbigene

position:1261340:1
position: 1261340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1269638:1
position: 1269638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261340-1269638:1:exon

GDF5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GDF5
product: growth differentiation factor 5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_003211895.4
SIO_010081: GDF5
subclass of: SO_0000673
so part of: GDF5
location: join(1261340..1264389,1265952..1269638)
location: region:1261340-1269638:1
so has part: feature:1261340-1264389:1:exon
so has part: feature:1265952-1269638:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1261340-1264389:1:exon

position:1264389:1
position: 1264389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1265952-1269638:1:exon

position:1265952:1
position: 1265952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GDF5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GDF5
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: growth/differentiation factor 5
translation: MKILHFLTLLLWHLTWLSLDLVPGALSNSEAGQSNPGSKTDLLKAEGKERAPSARAGTPRAANHGFSTGTSKARTKSNAAQAGALLAKNDESQRVLSRTAATEAKVGHLPSRPSGVRTVTPKVPNLSSKAALKKTGTSGTDTSSFKTKKTKEPVTQREAKETFRQPPITPHEYMLSLYRTLSDAERKGVNGSVKLEAGLANTITSFIDKGQDERAPTIRKXKYIFDISALEKDGLLGAELRILRKKPSDTWKSHSSGKTSQVKLFSCSTNRQAATLLDSRTVSITDTPKWEVFDIWKLFRNFKNLVNLCFELETFDRGRAVDLRTVGFNRTGRQVNEKALFLVFGRTKKRDLFFNEIKARSGQDDKTVYEYLFNQRRKRRAPLATRQGKRPSKNLKARCSRKALHVNFKDMGWDDWIIAPLEYEAYHCEGLCEFPLRSHLEPTNHAVIQTLMNSMDPESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR
SIO_010081: GDF5
subclass of: SO_0000673
so part of: GDF5
location: join(1263756..1264389,1265952..1266819)
location: region:1263756-1266819:1
so has part: feature:1263756-1264389:1:exon
so has part: feature:1265952-1266819:1:exon

XP_003211943.2
type: Protein
SIO_000068: ncbiprotein

position:1263756:1
position: 1263756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266819:1
position: 1266819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition