Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 21, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 21, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015031.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015031.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000982.2.\nOn Dec 18, 2014 this sequence version replaced NC_015031.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 9740059
topology: linear
so has quality: SO_0000987
location: 1..9740059
location: region:1-9740059:1
RO_0002162: 9103

NC_015031
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9740059:1
position: 9740059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-9740059:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 21
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

LOC104913840
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913840
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<21..4499)
location: region:21-4499:-1
so has part: feature:21-4499:-1:exon
subclass of: SO_0000010

104913840
type: Gene
SIO_000068: ncbigene

position:21:-1
position: 21
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:4499:-1
position: 4499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:21-4499:-1:exon

LOC104913840
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913840
product: scavenger receptor cysteine-rich type 1 protein M130-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010721701.3
SIO_010081: LOC104913840
subclass of: SO_0000673
so part of: LOC104913840
location: complement(join(<21..335,412..729,878..1188,1407..1714,1920..2234,3077..4499))
location: region:21-4499:-1
so has part: feature:3077-4499:-1:exon
so has part: feature:1920-2234:-1:exon
so has part: feature:1407-1714:-1:exon
so has part: feature:878-1188:-1:exon
so has part: feature:412-729:-1:exon
so has part: feature:21-335:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3077-4499:-1:exon

position:3077:-1
position: 3077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1920-2234:-1:exon

position:1920:-1
position: 1920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2234:-1
position: 2234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1407-1714:-1:exon

position:1407:-1
position: 1407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714:-1
position: 1714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:878-1188:-1:exon

position:878:-1
position: 878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188:-1
position: 1188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:412-729:-1:exon

position:412:-1
position: 412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729:-1
position: 729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:21-335:-1:exon

position:335:-1
position: 335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913840
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913840
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: scavenger receptor cysteine-rich type 1 protein M130-like
translation: MGTGGLLCPRVLWLLLWVQPCRGAAEVRLADGSGHCDGRVEVKHQEQWGTVCDDEWDKEDAAVVCKQLRCGSAISATRNEGFVLGSGPIWMDEVQCKGTESALSDCEHNGRGEHYCTHSLDAGVTCTGFVRLVGGDSRCSGRVEIHDGDGWKSVCDSHFGPKAADVVCRDLQCGTALPVXRASAFGEGTGATWDRELQCVGNESSLSSCPTGTPRDQPCPQTSIAAVTCTRFRLVNGSTACEGRVEVEVRGTWGSLCASRWDLLDAHVLCHHLGCGFAVSIPEGGPFGRGTGPVWNDWFHCEGTESSPAQCPVTAPGGPSPCSHENDAAVICSGPPHNASLRLVGGGSRCDGRVEIFRRGTWGRVLDDQWDMEDAGVVCRQLRCEEAEAAYAVPRAERGTGPVGLRGVRCAGHEAGLSLCNASPPEATGIMEDVGAVCRGSRRVQLVDGAGRCAGRVEIYYRGQWGTVCDDAWDMADADVVCRQLSCGWAVEAAGSARFGEGSGHIWLDGVNCSGAESALWNCSAEAWGQHDCGHKEDAGVVCS
SIO_010081: LOC104913840
subclass of: SO_0000673
so part of: LOC104913840
location: complement(join(<21..335,412..729,878..1188,1407..1714,1920..2234,3077..3143))
location: region:21-3143:-1
so has part: feature:3077-3143:-1:exon
so has part: feature:1920-2234:-1:exon
so has part: feature:1407-1714:-1:exon
so has part: feature:878-1188:-1:exon
so has part: feature:412-729:-1:exon
so has part: feature:21-335:-1:exon

XP_010720003.2
type: Protein
SIO_000068: ncbiprotein

position:3143:-1
position: 3143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3077-3143:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1920-2234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1407-1714:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:878-1188:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412-729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:21-335:-1:exon

LOC104913841
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8482..10862)
location: region:8482-10862:-1
so has part: feature:8482-10862:-1:exon
subclass of: SO_0000010

104913841
type: Gene
SIO_000068: ncbigene

position:8482:-1
position: 8482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10862:-1
position: 10862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8482-10862:-1:exon

LOC104913841
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913841
product: antigen WC1.1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_019621872.2
SIO_010081: LOC104913841
subclass of: SO_0000673
so part of: LOC104913841
location: complement(join(8482..9096,9308..9460,9657..9752,9918..10061,10297..10332,10503..10862))
location: region:8482-10862:-1
so has part: feature:10503-10862:-1:exon
so has part: feature:10297-10332:-1:exon
so has part: feature:9918-10061:-1:exon
so has part: feature:9657-9752:-1:exon
so has part: feature:9308-9460:-1:exon
so has part: feature:8482-9096:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10503-10862:-1:exon

position:10503:-1
position: 10503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10297-10332:-1:exon

position:10297:-1
position: 10297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10332:-1
position: 10332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9918-10061:-1:exon

position:9918:-1
position: 9918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10061:-1
position: 10061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9657-9752:-1:exon

position:9657:-1
position: 9657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9752:-1
position: 9752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9308-9460:-1:exon

position:9308:-1
position: 9308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9460:-1
position: 9460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8482-9096:-1:exon

position:9096:-1
position: 9096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913841
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913841
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: antigen WC1.1-like
translation: MTASPPQRDPGQILGYAAVSRRVSVPVIICIILGLLVCLLLALLARQMQSARARHRDSRRSGEPFSEAVYEEIEYSPVREKKMRYSFSDIPVLPADSPVEGYDDAGEASDPGEHPVPGQGDWQVPGAQEEGEGPRDAAGGESLHSWRSVGAPEVDGDTSPLSLGSTGYDDADEMSLS
SIO_010081: LOC104913841
subclass of: SO_0000673
so part of: LOC104913841
location: complement(join(8981..9096,9308..9460,9657..9752,9918..10061,10297..10321))
location: region:8981-10321:-1
so has part: feature:10297-10321:-1:exon
so has part: feature:9918-10061:-1:exon
so has part: feature:9657-9752:-1:exon
so has part: feature:9308-9460:-1:exon
so has part: feature:8981-9096:-1:exon

XP_019477417.1
type: Protein
SIO_000068: ncbiprotein

position:8981:-1
position: 8981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10321:-1
position: 10321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10297-10321:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9918-10061:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9657-9752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9308-9460:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8981-9096:-1:exon

LOC100545344
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100545344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <13277..28203
location: region:13277-28203:1
so has part: feature:13277-28203:1:exon
subclass of: SO_0000010

100545344
type: Gene
SIO_000068: ncbigene

position:13277:1
position: 13277
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:28203:1
position: 28203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13277-28203:1:exon

LOC100545344
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545344
product: myosin-7-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 23 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_010721703.3
SIO_010081: LOC100545344
subclass of: SO_0000673
so part of: LOC100545344
location: join(<13277..13297,13393..13456,13786..13884,13966..14069,14155..14293,14374..14492,14566..14715,15416..15586,15687..15997,16087..16154,16233..16320,16397..16514,16601..16724,17411..17547,17633..17759,17866..17994,18073..18315,18501..18677,18754..18899,19002..19092,20063..20452,20541..20667,20771..20889,21814..22010,22092..22275,22371..22536,22607..22731,22823..23131,23737..23940,24029..24154,24930..25205,26600..26695,27860..27994,28080..28203)
location: region:13277-28203:1
so has part: feature:13277-13297:1:exon
so has part: feature:13393-13456:1:exon
so has part: feature:13786-13884:1:exon
so has part: feature:13966-14069:1:exon
so has part: feature:14155-14293:1:exon
so has part: feature:14374-14492:1:exon
so has part: feature:14566-14715:1:exon
so has part: feature:15416-15586:1:exon
so has part: feature:15687-15997:1:exon
so has part: feature:16087-16154:1:exon
so has part: feature:16233-16320:1:exon
so has part: feature:16397-16514:1:exon
so has part: feature:16601-16724:1:exon
so has part: feature:17411-17547:1:exon
so has part: feature:17633-17759:1:exon
so has part: feature:17866-17994:1:exon
so has part: feature:18073-18315:1:exon
so has part: feature:18501-18677:1:exon
so has part: feature:18754-18899:1:exon
so has part: feature:19002-19092:1:exon
so has part: feature:20063-20452:1:exon
so has part: feature:20541-20667:1:exon
so has part: feature:20771-20889:1:exon
so has part: feature:21814-22010:1:exon
so has part: feature:22092-22275:1:exon
so has part: feature:22371-22536:1:exon
so has part: feature:22607-22731:1:exon
so has part: feature:22823-23131:1:exon
so has part: feature:23737-23940:1:exon
so has part: feature:24029-24154:1:exon
so has part: feature:24930-25205:1:exon
so has part: feature:26600-26695:1:exon
so has part: feature:27860-27994:1:exon
so has part: feature:28080-28203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13277-13297:1:exon

position:13297:1
position: 13297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13393-13456:1:exon

position:13393:1
position: 13393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13456:1
position: 13456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13786-13884:1:exon

position:13786:1
position: 13786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13884:1
position: 13884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:13966-14069:1:exon

position:13966:1
position: 13966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14069:1
position: 14069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:14155-14293:1:exon

position:14155:1
position: 14155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14293:1
position: 14293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:14374-14492:1:exon

position:14374:1
position: 14374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14492:1
position: 14492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:14566-14715:1:exon

position:14566:1
position: 14566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14715:1
position: 14715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15416-15586:1:exon

position:15416:1
position: 15416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15586:1
position: 15586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15687-15997:1:exon

position:15687:1
position: 15687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15997:1
position: 15997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:16087-16154:1:exon

position:16087:1
position: 16087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16154:1
position: 16154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:16233-16320:1:exon

position:16233:1
position: 16233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16320:1
position: 16320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:16397-16514:1:exon

position:16397:1
position: 16397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16514:1
position: 16514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:16601-16724:1:exon

position:16601:1
position: 16601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16724:1
position: 16724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:17411-17547:1:exon

position:17411:1
position: 17411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17547:1
position: 17547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:17633-17759:1:exon

position:17633:1
position: 17633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17759:1
position: 17759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:17866-17994:1:exon

position:17866:1
position: 17866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17994:1
position: 17994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:18073-18315:1:exon

position:18073:1
position: 18073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18315:1
position: 18315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:18501-18677:1:exon

position:18501:1
position: 18501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18677:1
position: 18677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:18754-18899:1:exon

position:18754:1
position: 18754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18899:1
position: 18899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:19002-19092:1:exon

position:19002:1
position: 19002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19092:1
position: 19092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:20063-20452:1:exon

position:20063:1
position: 20063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20452:1
position: 20452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:20541-20667:1:exon

position:20541:1
position: 20541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20667:1
position: 20667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:20771-20889:1:exon

position:20771:1
position: 20771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20889:1
position: 20889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:21814-22010:1:exon

position:21814:1
position: 21814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22010:1
position: 22010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:22092-22275:1:exon

position:22092:1
position: 22092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22275:1
position: 22275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:22371-22536:1:exon

position:22371:1
position: 22371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22536:1
position: 22536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:22607-22731:1:exon

position:22607:1
position: 22607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:22731:1
position: 22731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:22823-23131:1:exon

position:22823:1
position: 22823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23131:1
position: 23131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:23737-23940:1:exon

position:23737:1
position: 23737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23940:1
position: 23940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:24029-24154:1:exon

position:24029:1
position: 24029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24154:1
position: 24154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:24930-25205:1:exon

position:24930:1
position: 24930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25205:1
position: 25205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:26600-26695:1:exon

position:26600:1
position: 26600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26695:1
position: 26695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:27860-27994:1:exon

position:27860:1
position: 27860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27994:1
position: 27994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:28080-28203:1:exon

position:28080:1
position: 28080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100545344
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545344
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: myosin-7-like
translation: NDNSSRFGKFIRIHFGATGKLASADIETYLLEKSRVIFQLKAERNYHIFYQILSNKKPELLDMMLVTNNPYDYAFISQGETTVPSIDDGEELLATDNAFDVLGFTPEEKNSIYKLTGAIMHFGNMKFKQKQREEQAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYAVGALAKAVYEKMFNWMVTRINNSLETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLQACIDLIEKPMGIMSILEEECMFPKATDVTFKAKLFDNHLGKSANFGKPRNIKGKPEAHFALVHYAGTVDYNIIGWLQKNKDPLNETVVGLYQKSALKLLANLFANYAGADAPVEKGKGAKKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPTAIPEGQFIDSRKGAEKLLGSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERLARIMTRLQAQVRGFLSRQEFKKILERRDSLLVIQWNIRAFMGVKNWPWMKLYFKIKPLLKSAETEKEMQTMKEEFGRLKEALEKSEARRKELEEKMVSMLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKAKEMLERLEEEEEMNAELTAKKRKLEDECSELKKDIDDLELSLAKVEKEKHATENKVKNLTEEMAGLDETIVKLTKEKKALQESHQQTLDDLQAEEDKVNTLTKAKVKLEQQVDDLESSLEQEKKIRMDLERAKRKLEGDLKLAQESIMDLENDKQQLEERLKKKDFELNALNARIEDEQAVAGQLQKKLKELQARIEELEEELEAERTGRAKVEKLRSDLSQELEEISERLEEAGGATSVQLELNKKREAEFQKLRRDLEEATLQHEATAAALRKKHADSVAELSEQLDNLQRVKQKLEKEKSELKLELDDVSSNMEQLIKAKANLEKMCRTTEDQMNEHRSKSEEAQRMVADLSTQRAKLQTENGELSRQLEEKEAFINQLMRGKLTYTQQLEDLKRQLEEEAKAKNALAHALQSARHDCDLLREQYEEETEAKAELQRTLSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEIEDLMADLERSNAAAAALDKKQRNFDKILSEWKQKFEESQTELEASQKESRSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGASHKTIHELEKVRKQLDAEKLELQAALEEAEASLEHEEGKILRAQLEFNQVKADYERKLAEKEEEMEQAKRNHLRVVDSLQTSLDAETRSRNEALRLKKKMEGDLNEMEIQLSHANRMAAEAQKQVKALQGYLKDAQLQLDDAVRANEDLKENIAIVERRNNLLQSELEELRAALEQSERARKLAEQELIEASERVQLLHSQNTSLINQKKKMEADISQLQTEVEEAIQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQLRLDEAEQLALKGGKKQLQKLEARVRELENELEAEQKRNAENVKGLRKSERRVKELSYQTEEDRKNMVRLQDLVDKLQLKVKAYKRQAEEAEEQANSNLAKFRKAQHELDEAEERADIAESQVNKLRARSRDIGAKKGLNEE
SIO_010081: LOC100545344
subclass of: SO_0000673
so part of: LOC100545344
location: join(<13277..13297,13393..13456,13786..13884,13966..14069,14155..14293,14374..14492,14566..14715,15416..15586,15687..15997,16087..16154,16233..16320,16397..16514,16601..16724,17411..17547,17633..17759,17866..17994,18073..18315,18501..18677,18754..18899,19002..19092,20063..20452,20541..20667,20771..20889,21814..22010,22092..22275,22371..22536,22607..22731,22823..23131,23737..23940,24029..24154,24930..25205,26600..26695,27860..27994,28080..28100)
location: region:13277-28100:1
so has part: feature:13277-13297:1:exon
so has part: feature:13393-13456:1:exon
so has part: feature:13786-13884:1:exon
so has part: feature:13966-14069:1:exon
so has part: feature:14155-14293:1:exon
so has part: feature:14374-14492:1:exon
so has part: feature:14566-14715:1:exon
so has part: feature:15416-15586:1:exon
so has part: feature:15687-15997:1:exon
so has part: feature:16087-16154:1:exon
so has part: feature:16233-16320:1:exon
so has part: feature:16397-16514:1:exon
so has part: feature:16601-16724:1:exon
so has part: feature:17411-17547:1:exon
so has part: feature:17633-17759:1:exon
so has part: feature:17866-17994:1:exon
so has part: feature:18073-18315:1:exon
so has part: feature:18501-18677:1:exon
so has part: feature:18754-18899:1:exon
so has part: feature:19002-19092:1:exon
so has part: feature:20063-20452:1:exon
so has part: feature:20541-20667:1:exon
so has part: feature:20771-20889:1:exon
so has part: feature:21814-22010:1:exon
so has part: feature:22092-22275:1:exon
so has part: feature:22371-22536:1:exon
so has part: feature:22607-22731:1:exon
so has part: feature:22823-23131:1:exon
so has part: feature:23737-23940:1:exon
so has part: feature:24029-24154:1:exon
so has part: feature:24930-25205:1:exon
so has part: feature:26600-26695:1:exon
so has part: feature:27860-27994:1:exon
so has part: feature:28080-28100:1:exon

XP_010720005.1
type: Protein
SIO_000068: ncbiprotein

position:28100:1
position: 28100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13277-13297:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:13393-13456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:13786-13884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:13966-14069:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:14155-14293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:14374-14492:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:14566-14715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15416-15586:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15687-15997:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16087-16154:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16233-16320:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16397-16514:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16601-16724:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:17411-17547:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:17633-17759:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:17866-17994:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:18073-18315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:18501-18677:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:18754-18899:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:19002-19092:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:20063-20452:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:20541-20667:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:20771-20889:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:21814-22010:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:22092-22275:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:22371-22536:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:22607-22731:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:22823-23131:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:23737-23940:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:24029-24154:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:24930-25205:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:26600-26695:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:27860-27994:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:28080-28100:1:exon

LOC104913842
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 35603..38251
location: region:35603-38251:1
so has part: feature:35603-38251:1:exon
subclass of: SO_0000010

104913842
type: Gene
SIO_000068: ncbigene

position:35603:1
position: 35603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38251:1
position: 38251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35603-38251:1:exon

LOC104913842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913842
product: myosin-7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556479.1
SIO_010081: LOC104913842
subclass of: SO_0000673
so part of: LOC104913842
location: join(35603..35768,36847..37039,37929..38251)
location: region:35603-38251:1
so has part: feature:35603-35768:1:exon
so has part: feature:36847-37039:1:exon
so has part: feature:37929-38251:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:35603-35768:1:exon

position:35768:1
position: 35768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:36847-37039:1:exon

position:36847:1
position: 36847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37039:1
position: 37039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:37929-38251:1:exon

position:37929:1
position: 37929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myosin-7-like
translation: MQTVTVREDQIMQQNPPKFDRIEDMAMLTFLHEPAVLYNLKERYASWMIYTYSGLFCVTVNPYKWLPVYNAEVVAAYRGKKRSEAPPHIFSISDNAYQNMLTGRGLPPGHPQPHSAMPSPSSDLAEFGEAAPFLRKSEQERIAAQTRPFDLKRDIFVPDEREEFVKATIVSREGNKVTAQTERGKVSPRGGKSHPNWVGSGVAAVGCRTARIGPRTVGIGT
SIO_010081: LOC104913842
subclass of: SO_0000673
so part of: LOC104913842
location: join(35619..35768,36847..37039,37929..38251)
location: region:35619-38251:1
so has part: feature:35619-35768:1:exon
so has part: feature:36847-37039:1:exon
so has part: feature:37929-38251:1:exon

XP_031412339.1
type: Protein
SIO_000068: ncbiprotein

position:35619:1
position: 35619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35619-35768:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:36847-37039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:37929-38251:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 42587..42686
location: region:42587-42686:1
so has part: feature:42587-42686:1:region

position:42587:1
position: 42587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42686:1
position: 42686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42587-42686:1:region

LOC100546426
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(45489..49697)
location: region:45489-49697:-1
so has part: feature:45489-49697:-1:exon
subclass of: SO_0000010

100546426
type: Gene
SIO_000068: ncbigene

position:45489:-1
position: 45489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49697:-1
position: 49697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:45489-49697:-1:exon

LOC100546426
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546426
product: fibrinogen-like protein 1-like protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010721706.3
SIO_010081: LOC100546426
subclass of: SO_0000673
so part of: LOC100546426
location: complement(join(45489..46613,47311..47355,48525..48668,49571..49697))
location: region:45489-49697:-1
so has part: feature:49571-49697:-1:exon
so has part: feature:48525-48668:-1:exon
so has part: feature:47311-47355:-1:exon
so has part: feature:45489-46613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49571-49697:-1:exon

position:49571:-1
position: 49571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48525-48668:-1:exon

position:48525:-1
position: 48525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48668:-1
position: 48668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:47311-47355:-1:exon

position:47311:-1
position: 47311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47355:-1
position: 47355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:45489-46613:-1:exon

position:46613:-1
position: 46613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100546426
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546426
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen-like protein 1-like protein
translation: MVEGGALPSPTEPHISTLPPGQAPRLPTPQGPCSNIMAAHHSGLLLCTCMLALLAPLLALQIENLTRLKANLSDILNLHSDGLHPGEDEGNARRGRASGTGWPKDCSEISAGSPSGVYVIQPSGLHPIVVYCEMNVTDGGWTVIQRNRHNTDITWAESWSTYKYGFGNVRGDYWLGTEYIHQIAKQKVYQVRFVIQDASNNIRFAEYNLFSLEDESQGYRLRLGSYAGTAGDAMTSANSATVHDNMKFSAKDLDQDTNSGNCASANGGGWWYSSCYSVRLNFKGYLTWSGLCNGNCRASAILIKTAPFC
SIO_010081: LOC100546426
subclass of: SO_0000673
so part of: LOC100546426
location: complement(join(45985..46613,47311..47355,48525..48668,49571..49682))
location: region:45985-49682:-1
so has part: feature:49571-49682:-1:exon
so has part: feature:48525-48668:-1:exon
so has part: feature:47311-47355:-1:exon
so has part: feature:45985-46613:-1:exon

XP_010720008.2
type: Protein
SIO_000068: ncbiprotein

position:45985:-1
position: 45985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49682:-1
position: 49682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49571-49682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48525-48668:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:47311-47355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:45985-46613:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 49362..49461
location: region:49362-49461:1
so has part: feature:49362-49461:1:region

position:49362:1
position: 49362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49461:1
position: 49461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49362-49461:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 50022..50121
location: region:50022-50121:1
so has part: feature:50022-50121:1:region

position:50022:1
position: 50022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50121:1
position: 50121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50022-50121:1:region

SDF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SDF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(50242..>52231)
location: region:50242-52231:-1
so has part: feature:50242-52231:-1:exon
subclass of: SO_0000010

104913881
type: Gene
SIO_000068: ncbigene

position:50242:-1
position: 50242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52231:-1
position: 52231
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50242-52231:-1:exon

SDF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SDF2
product: stromal cell derived factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010721872.3
SIO_010081: SDF2
subclass of: SO_0000673
so part of: SDF2
location: complement(join(50242..51165,51841..52037,52120..>52231))
location: region:50242-52231:-1
so has part: feature:52120-52231:-1:exon
so has part: feature:51841-52037:-1:exon
so has part: feature:50242-51165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:52120-52231:-1:exon

position:52120:-1
position: 52120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51841-52037:-1:exon

position:51841:-1
position: 51841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52037:-1
position: 52037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:50242-51165:-1:exon

position:51165:-1
position: 51165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SDF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SDF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stromal cell-derived factor 2
translation: ARGGGSGSGPVTCGSVVKLLNVRHNVRLHSHDVRYGSGSGQQSVTGVSAADDGNSYWRVRGRTAAVCERGQPVRCGQAIRLTHLGTGRNLHSHNFVSPLSGNQEVSAFGEDGEGDYLDDWTVLCSGTYWARDSEVRFQHTSTDVFLSVTGEQYGRPINGQREVHGMATSSQNNYWKVMEGIFMQPGEVFKAEQHHVEL
SIO_010081: SDF2
subclass of: SO_0000673
so part of: SDF2
location: complement(join(50878..51165,51841..52037,52120..>52231))
location: region:50878-52231:-1
so has part: feature:52120-52231:-1:exon
so has part: feature:51841-52037:-1:exon
so has part: feature:50878-51165:-1:exon

XP_010720174.1
type: Protein
SIO_000068: ncbiprotein

position:50878:-1
position: 50878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52120-52231:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51841-52037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:50878-51165:-1:exon

KIAA0100
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KIAA0100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(52518..64482)
location: region:52518-64482:-1
so has part: feature:52518-64482:-1:exon
subclass of: SO_0000010

100543950
type: Gene
SIO_000068: ncbigene

position:52518:-1
position: 52518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64482:-1
position: 64482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:52518-64482:-1:exon

KIAA0100
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KIAA0100
product: KIAA0100 ortholog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 191 samples with support for all annotated introns
transcript id: XM_019621824.2
SIO_010081: KIAA0100
subclass of: SO_0000673
so part of: KIAA0100
location: complement(join(52518..53012,53143..53277,53352..53453,53736..53860,54111..54245,54321..54431,54523..54609,54687..54867,54947..55068,55138..55293,55368..55489,55623..55805,55973..56072,56146..56352,56450..56607,56728..57022,57156..57358,57432..57531,57610..57800,57929..58149,58225..58343,58422..58624,58701..58892,59136..60231,60366..60571,60659..60923,61053..61216,61459..61577,61789..61937,62031..62098,62184..62308,62673..62796,62935..63115,63322..63382,63481..63599,63677..63839,64054..64100,64340..64482))
location: region:52518-64482:-1
so has part: feature:64340-64482:-1:exon
so has part: feature:64054-64100:-1:exon
so has part: feature:63677-63839:-1:exon
so has part: feature:63481-63599:-1:exon
so has part: feature:63322-63382:-1:exon
so has part: feature:62935-63115:-1:exon
so has part: feature:62673-62796:-1:exon
so has part: feature:62184-62308:-1:exon
so has part: feature:62031-62098:-1:exon
so has part: feature:61789-61937:-1:exon
so has part: feature:61459-61577:-1:exon
so has part: feature:61053-61216:-1:exon
so has part: feature:60659-60923:-1:exon
so has part: feature:60366-60571:-1:exon
so has part: feature:59136-60231:-1:exon
so has part: feature:58701-58892:-1:exon
so has part: feature:58422-58624:-1:exon
so has part: feature:58225-58343:-1:exon
so has part: feature:57929-58149:-1:exon
so has part: feature:57610-57800:-1:exon
so has part: feature:57432-57531:-1:exon
so has part: feature:57156-57358:-1:exon
so has part: feature:56728-57022:-1:exon
so has part: feature:56450-56607:-1:exon
so has part: feature:56146-56352:-1:exon
so has part: feature:55973-56072:-1:exon
so has part: feature:55623-55805:-1:exon
so has part: feature:55368-55489:-1:exon
so has part: feature:55138-55293:-1:exon
so has part: feature:54947-55068:-1:exon
so has part: feature:54687-54867:-1:exon
so has part: feature:54523-54609:-1:exon
so has part: feature:54321-54431:-1:exon
so has part: feature:54111-54245:-1:exon
so has part: feature:53736-53860:-1:exon
so has part: feature:53352-53453:-1:exon
so has part: feature:53143-53277:-1:exon
so has part: feature:52518-53012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:64340-64482:-1:exon

position:64340:-1
position: 64340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:64054-64100:-1:exon

position:64054:-1
position: 64054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64100:-1
position: 64100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:63677-63839:-1:exon

position:63677:-1
position: 63677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63839:-1
position: 63839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:63481-63599:-1:exon

position:63481:-1
position: 63481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63599:-1
position: 63599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:63322-63382:-1:exon

position:63322:-1
position: 63322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63382:-1
position: 63382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:62935-63115:-1:exon

position:62935:-1
position: 62935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63115:-1
position: 63115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62673-62796:-1:exon

position:62673:-1
position: 62673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62796:-1
position: 62796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:62184-62308:-1:exon

position:62184:-1
position: 62184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62308:-1
position: 62308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:62031-62098:-1:exon

position:62031:-1
position: 62031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62098:-1
position: 62098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:61789-61937:-1:exon

position:61789:-1
position: 61789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61937:-1
position: 61937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:61459-61577:-1:exon

position:61459:-1
position: 61459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61577:-1
position: 61577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:61053-61216:-1:exon

position:61053:-1
position: 61053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61216:-1
position: 61216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:60659-60923:-1:exon

position:60659:-1
position: 60659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60923:-1
position: 60923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:60366-60571:-1:exon

position:60366:-1
position: 60366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60571:-1
position: 60571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:59136-60231:-1:exon

position:59136:-1
position: 59136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60231:-1
position: 60231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:58701-58892:-1:exon

position:58701:-1
position: 58701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58892:-1
position: 58892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:58422-58624:-1:exon

position:58422:-1
position: 58422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58624:-1
position: 58624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:58225-58343:-1:exon

position:58225:-1
position: 58225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58343:-1
position: 58343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:57929-58149:-1:exon

position:57929:-1
position: 57929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58149:-1
position: 58149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:57610-57800:-1:exon

position:57610:-1
position: 57610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57800:-1
position: 57800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:57432-57531:-1:exon

position:57432:-1
position: 57432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57531:-1
position: 57531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:57156-57358:-1:exon

position:57156:-1
position: 57156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57358:-1
position: 57358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:56728-57022:-1:exon

position:56728:-1
position: 56728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57022:-1
position: 57022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:56450-56607:-1:exon

position:56450:-1
position: 56450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56607:-1
position: 56607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:56146-56352:-1:exon

position:56146:-1
position: 56146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56352:-1
position: 56352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:55973-56072:-1:exon

position:55973:-1
position: 55973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56072:-1
position: 56072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:55623-55805:-1:exon

position:55623:-1
position: 55623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55805:-1
position: 55805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:55368-55489:-1:exon

position:55368:-1
position: 55368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55489:-1
position: 55489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:55138-55293:-1:exon

position:55138:-1
position: 55138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55293:-1
position: 55293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:54947-55068:-1:exon

position:54947:-1
position: 54947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55068:-1
position: 55068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:54687-54867:-1:exon

position:54687:-1
position: 54687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54867:-1
position: 54867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:54523-54609:-1:exon

position:54523:-1
position: 54523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54609:-1
position: 54609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:54321-54431:-1:exon

position:54321:-1
position: 54321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54431:-1
position: 54431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:54111-54245:-1:exon

position:54111:-1
position: 54111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54245:-1
position: 54245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:53736-53860:-1:exon

position:53736:-1
position: 53736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53860:-1
position: 53860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:53352-53453:-1:exon

position:53352:-1
position: 53352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53453:-1
position: 53453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:53143-53277:-1:exon

position:53143:-1
position: 53143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53277:-1
position: 53277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:52518-53012:-1:exon

position:53012:-1
position: 53012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIAA0100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KIAA0100
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein KIAA0100 homolog
translation: MDSINIMVLHVATSESLWHIQASKTRLLLNGDGKSLKCEMNLTKVNSKVLRSSQLDDTCLAELALALSISLEISSRRRLVDVRLGVRTLQAELHEGLFCSPLLHRVTARSPQPSPDSAESLKSPSLLSRDTLQLIPRRVEVKLESTSVVLSMNSQKRHLTWSLKLLQFLYQREEEQIPLRNFTPTSDLDQMSVDLHLEDGLLLSQSRQRIVCLNSLKTSVQVTAIDLSAAVLLNTCIIHYRHQEFSHWLGLLAQEHRHHLAPVPSQGHKGRSYPQIIAPIILSASLSNVNVSVQLGDTPPFALGFNSISADYQHLRPQSVHQRAVLVVDHLCWRVGNDSHIQRAPHPPNMHVWGEALILDSFNLQGSYNQPLGMSSAQSDTLFLDCTIRGLQVESSDTCTECLARVLSLFCPQPSGAELAEQPFSAQSEPWILLWKVDLKVEDVNLFTLSAVVGALELRLDTLTVLGSAESCTVSAQGMVLALVKSITEKMQPCCKAPAIPNPVANLSTLSITYHSSIRSLEVQCGEGLAVLWSPPDHMHLYHHTLATLHCLEALRCALGHGTPPSLSPESPASPMVTPPETLELLQADGAPPKRLLSLSLELSSAKVTAFVSEANYISLAAERTSVSWHGGALHGYCPELAAGFDGHSIFSFKEVEVKLLPELEEVILHRCAFPTLHTLRNRGWAFSFASVTIEFPYQYDFSRTLDAAVGVQKWLKGLHRRGRPASTALPPDLLLKVTHFSWVFLDDVFEVKLRDNYELMKDESKESAKRLQLLDAKVAALRKQHGELLPARKIEELYASLEKKNIEIYIQRSRRLYANTPMRRALLTWTLAHLELVAMADESFHGTERVVEQMRDIDNVSPFPSEGLEMVTQWCRMMKGSVSSFFVRIRDYPRYLFEIRNWQLSGRLIGAEQCGQACSRRRQVLKLGLPWGDAMVERNMPPLKFYHDFHSEISQYTIVWGPCWDPAWTLIGQCVDLLTKPSEDPSAPLPWWDKSRLLFHGDWHMDIEQANLHQLATEDPYNTTENMHWEWSHLSFHWKPGQFVFKGNLDINVRTASKYDDCCFLHLPDLCMTLDLQWLCHGNPHDHHGVVLRSPEFLPEVPVGQQYDSYRAFRSENLNLSIRMDLTRLSEEHSQPRILLYSSTLRWMQNFWATWTSVTRPICRGKLFNNMKPSKKKLGQHYKQLSYTALFPQLQVHYWASFAQQRGIQVECCQGHIFTRGTQRLIPQAGTVMRRLISEWSITQMVSDLSQVTVHLMASTCDENADHRLDTLVKKTHLLSLSSLTYQRHSNRTAEEELPLRDGDDGFHTHQLHLVDLRASWTTTNRDIAFGLYDGYKKAAVLKRNLSTEALKGLKIDTQLQAKKLKRGTLSAHSVPAKVTAPITSGRPERASSGGAYMLQKLIEETDKFVVFTEEESGASEQLCGIAACQTDDIYNRNCLIELVNCQMVLRGAETEGCVIVSAAKAQLLQCQHHPAWYGDTLKQKTSWTCLLDGMQYFATTESSPTEREHGQLWLEVKNIEEHRQRSLDSVQELMESGQAVGGMVSTTTDWNQPSEAQQTQQVQRIISRCSCRMYYISYSHDIDPELATQIKPPETPANQEKEDLLKKQEGAVDTFTLIHHDLEISTNPAQYAMILDIVNNLLLHVEPKRKEHSEKKQRVRFQLEISSNPEEQRSSILHLQEAVRQHVAQIRQLEKQMYSNVKSLQDDSKNESLLDLNHKLQQQLSQEKADLQLESEELNILIRCFKDFQLQRANKMELRKQPEDVSVARRTEFYFAQARWRLTEEDGQLGIAELELQRFLYSKVNKSDDTAEHLLELGWVTMNNLLPNAVYKVVLRPQSSCQSGRQLALRIFSKVRPPVGGISIKEHFEVNVVPLTIQLTHQFFHRMMGFFFPGRNVEEEEVGDEEXKSKLVTTGIPVVKPRQLIGADDSLGAGKGVTQGLNRTSGVRRSFRKAPEHPVDDIDKMKERAAMNNSFIYIKIPQVPLCVSYKGEKNSVDW…
SIO_010081: KIAA0100
subclass of: SO_0000673
so part of: KIAA0100
location: complement(join(52830..53012,53143..53277,53352..53453,53736..53860,54111..54245,54321..54431,54523..54609,54687..54867,54947..55068,55138..55293,55368..55489,55623..55805,55973..56072,56146..56352,56450..56607,56728..57022,57156..57358,57432..57531,57610..57800,57929..58149,58225..58343,58422..58624,58701..58892,59136..60231,60366..60571,60659..60923,61053..61216,61459..61577,61789..61937,62031..62098,62184..62308,62673..62796,62935..63115,63322..63382,63481..63584))
location: region:52830-63584:-1
so has part: feature:63481-63584:-1:exon
so has part: feature:63322-63382:-1:exon
so has part: feature:62935-63115:-1:exon
so has part: feature:62673-62796:-1:exon
so has part: feature:62184-62308:-1:exon
so has part: feature:62031-62098:-1:exon
so has part: feature:61789-61937:-1:exon
so has part: feature:61459-61577:-1:exon
so has part: feature:61053-61216:-1:exon
so has part: feature:60659-60923:-1:exon
so has part: feature:60366-60571:-1:exon
so has part: feature:59136-60231:-1:exon
so has part: feature:58701-58892:-1:exon
so has part: feature:58422-58624:-1:exon
so has part: feature:58225-58343:-1:exon
so has part: feature:57929-58149:-1:exon
so has part: feature:57610-57800:-1:exon
so has part: feature:57432-57531:-1:exon
so has part: feature:57156-57358:-1:exon
so has part: feature:56728-57022:-1:exon
so has part: feature:56450-56607:-1:exon
so has part: feature:56146-56352:-1:exon
so has part: feature:55973-56072:-1:exon
so has part: feature:55623-55805:-1:exon
so has part: feature:55368-55489:-1:exon
so has part: feature:55138-55293:-1:exon
so has part: feature:54947-55068:-1:exon
so has part: feature:54687-54867:-1:exon
so has part: feature:54523-54609:-1:exon
so has part: feature:54321-54431:-1:exon
so has part: feature:54111-54245:-1:exon
so has part: feature:53736-53860:-1:exon
so has part: feature:53352-53453:-1:exon
so has part: feature:53143-53277:-1:exon
so has part: feature:52830-53012:-1:exon

XP_019477369.2
type: Protein
SIO_000068: ncbiprotein

position:52830:-1
position: 52830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63584:-1
position: 63584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63481-63584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63322-63382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:62935-63115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:62673-62796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62184-62308:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62031-62098:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61789-61937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:61459-61577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:61053-61216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:60659-60923:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:60366-60571:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:59136-60231:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:58701-58892:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:58422-58624:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:58225-58343:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:57929-58149:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:57610-57800:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:57432-57531:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:57156-57358:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:56728-57022:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:56450-56607:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:56146-56352:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:55973-56072:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:55623-55805:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:55368-55489:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:55138-55293:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:54947-55068:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:54687-54867:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:54523-54609:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:54321-54431:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:54111-54245:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:53736-53860:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:53352-53453:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:53143-53277:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:52830-53012:-1:exon

RSKR
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RSKR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(63625..73742)
location: region:63625-73742:-1
so has part: feature:63625-73742:-1:exon
subclass of: SO_0000010

100543796
type: Gene
SIO_000068: ncbigene

position:63625:-1
position: 63625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73742:-1
position: 73742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63625-73742:-1:exon

RSKR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RSKR
product: ribosomal protein S6 kinase related
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556480.1
SIO_010081: RSKR
subclass of: SO_0000673
so part of: RSKR
location: complement(join(63625..63644,63733..63839,64054..64100,64340..64469,65247..65704,65779..65889,65962..66050,66128..66217,66315..66342,66434..66474,66566..66673,67431..67500,67584..67652,67727..67810,68313..68353,68458..68573,68805..68928,69004..69075,69190..69373,69451..69616,69916..70049,70322..70391,70516..70609,70692..70785,70930..71064,71144..71236,71338..71457,71543..71677,71767..71859,71935..72054,72190..72382,72463..73742))
location: region:63625-73742:-1
so has part: feature:72463-73742:-1:exon
so has part: feature:72190-72382:-1:exon
so has part: feature:71935-72054:-1:exon
so has part: feature:71767-71859:-1:exon
so has part: feature:71543-71677:-1:exon
so has part: feature:71338-71457:-1:exon
so has part: feature:71144-71236:-1:exon
so has part: feature:70930-71064:-1:exon
so has part: feature:70692-70785:-1:exon
so has part: feature:70516-70609:-1:exon
so has part: feature:70322-70391:-1:exon
so has part: feature:69916-70049:-1:exon
so has part: feature:69451-69616:-1:exon
so has part: feature:69190-69373:-1:exon
so has part: feature:69004-69075:-1:exon
so has part: feature:68805-68928:-1:exon
so has part: feature:68458-68573:-1:exon
so has part: feature:68313-68353:-1:exon
so has part: feature:67727-67810:-1:exon
so has part: feature:67584-67652:-1:exon
so has part: feature:67431-67500:-1:exon
so has part: feature:66566-66673:-1:exon
so has part: feature:66434-66474:-1:exon
so has part: feature:66315-66342:-1:exon
so has part: feature:66128-66217:-1:exon
so has part: feature:65962-66050:-1:exon
so has part: feature:65779-65889:-1:exon
so has part: feature:65247-65704:-1:exon
so has part: feature:64340-64469:-1:exon
so has part: feature:64054-64100:-1:exon
so has part: feature:63733-63839:-1:exon
so has part: feature:63625-63644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72463-73742:-1:exon

position:72463:-1
position: 72463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72190-72382:-1:exon

position:72190:-1
position: 72190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72382:-1
position: 72382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71935-72054:-1:exon

position:71935:-1
position: 71935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72054:-1
position: 72054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:71767-71859:-1:exon

position:71767:-1
position: 71767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71859:-1
position: 71859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:71543-71677:-1:exon

position:71543:-1
position: 71543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71677:-1
position: 71677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:71338-71457:-1:exon

position:71338:-1
position: 71338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71457:-1
position: 71457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:71144-71236:-1:exon

position:71144:-1
position: 71144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71236:-1
position: 71236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:70930-71064:-1:exon

position:70930:-1
position: 70930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71064:-1
position: 71064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:70692-70785:-1:exon

position:70692:-1
position: 70692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70785:-1
position: 70785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:70516-70609:-1:exon

position:70516:-1
position: 70516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70609:-1
position: 70609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:70322-70391:-1:exon

position:70322:-1
position: 70322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70391:-1
position: 70391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:69916-70049:-1:exon

position:69916:-1
position: 69916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70049:-1
position: 70049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:69451-69616:-1:exon

position:69451:-1
position: 69451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69616:-1
position: 69616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:69190-69373:-1:exon

position:69190:-1
position: 69190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69373:-1
position: 69373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:69004-69075:-1:exon

position:69004:-1
position: 69004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69075:-1
position: 69075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:68805-68928:-1:exon

position:68805:-1
position: 68805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68928:-1
position: 68928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:68458-68573:-1:exon

position:68458:-1
position: 68458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68573:-1
position: 68573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:68313-68353:-1:exon

position:68313:-1
position: 68313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68353:-1
position: 68353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:67727-67810:-1:exon

position:67727:-1
position: 67727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67810:-1
position: 67810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:67584-67652:-1:exon

position:67584:-1
position: 67584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67652:-1
position: 67652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:67431-67500:-1:exon

position:67431:-1
position: 67431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67500:-1
position: 67500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:66566-66673:-1:exon

position:66566:-1
position: 66566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66673:-1
position: 66673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:66434-66474:-1:exon

position:66434:-1
position: 66434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66474:-1
position: 66474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:66315-66342:-1:exon

position:66315:-1
position: 66315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66342:-1
position: 66342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:66128-66217:-1:exon

position:66128:-1
position: 66128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66217:-1
position: 66217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:65962-66050:-1:exon

position:65962:-1
position: 65962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66050:-1
position: 66050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:65779-65889:-1:exon

position:65779:-1
position: 65779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65889:-1
position: 65889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:65247-65704:-1:exon

position:65247:-1
position: 65247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65704:-1
position: 65704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:64340-64469:-1:exon

position:64469:-1
position: 64469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:64054-64100:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:63733-63839:-1:exon

position:63733:-1
position: 63733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:63625-63644:-1:exon

position:63644:-1
position: 63644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RSKR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RSKR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase-related protein
translation: MGPCTLDTPGSPSPGPPGTSTPQDTPFRRWRAAPPDLSCSPVASQPLAENGDVGTPPHHSTLGMAGSPSPASPEQCSTQIEAVGSEPVESAVTATPVSLSEPSLGAVSWIMPLVWLERTLPASSLLESLRHSLPLSVSWRDAGTSVTPVPTAAVSTGVTPVPTVPMGTTVTPVSTVPVGSSVTPVPTVATGTSVTPVPTGSIGTSVTPVPTGSIGTSVTPVSTGSIGTSVTPVPTMAMGTTMTPEERSAGTSMPAGAKDSAAETDSLLWHCPREQLRLLPRAELEGRLESTLIIIEALSLQLRDWQDCQRPLPAVGPAGQRDAHTQTDVTRPQGEEGIYHGLYVELRRKAQAVQRQRGAEQELAQQLARAAEAMDAWTGQRRALWDVADAALQGVKNDHAALEQERLQVRAMVSRCEAVLRAVPTKLQSCLQERDAAQQQADEALRAKQESDGFLEAFRSHAAAQIGACTQSLELQQELSTLLAAAVQQQVSLAAEAQPFREFIDVTFANLQEERGALDGEREQVRALVSRCMTALRDVPTKLHSCLQERDAALQQVEEALQAKKEVSQQLEETLEALQDAVAQGEQLAVTNSRLSTDLSTVMKQLASLQQEQDALQQDYEEQKEKMSRLTKERDALQRECRELQEAAECREFLDQENRMSRRQLMEVEAKLQSTLAELQEHSLQHEELLEAHQGLQEERAALQKELESTKAELQDLQLKRDRVSWCSADIAESKARLQKLADCLRAALPQQDDDDEVPSRSKTWTPGWRTPRGPWTPRSSAWTPVCRTPACHTPHRARGSFVGSVLKAVSGRDGDEGTGGESLSARDRAVSTPKPPEPEDGLMEQAAELRAVVSDLSVLSSRIQELEQSEFKALQAEISDLQLELEKVTTESQERMDAQAANIAKLNKVLQGKLQVKFPVRPSARQQQLKILGLVAKGSFGTILKVLDCGREKVCAVKVVPKVEVLRRDTLKQCKEEVSIQRQVRHPFVHGLGDSWQGQRHLFIMCTYCSTGDLHALWRAAGRFAEATVRLFAAELILVLVYLHDLGIVHRDVKMENILLDERGHLKLADFGLSRHLRRGERAHTICGTLQYMAPEVLSGGPYSHAADWWSLGVLLFALASGEFPVPPARDHVAMLERVKESSYASPPALSPALGRLLAELLCHNPLRRLRYLHHFQGHPFFRGLPFDAELLQKDPVALAVAPRPSEQPLPDPDTFDDFDCDLTATPRTGHGLAEPPLEEPRSTEGPPHHSGTPPSLCTSSHGSNKPRPDGNAVGVSCRAAHRGQGLGAMYKTEPPTNANLPAPRCAARRQFPWLACRLAITWCRQKLQAELKIGSFGFFWAQNISLKFQQEQQTVEIDNVWISSKLSRELPRYFELCFGEVRIRTDLQKSHGLQPSFPEAPKEADDGCAAVA
SIO_010081: RSKR
subclass of: SO_0000673
so part of: RSKR
location: complement(join(63625..63644,63733..63839,64054..64100,64340..64469,65247..65704,65779..65889,65962..66050,66128..66217,66315..66342,66434..66474,66566..66673,67431..67500,67584..67652,67727..67810,68313..68353,68458..68573,68805..68928,69004..69075,69190..69373,69451..69616,69916..70049,70322..70391,70516..70609,70692..70785,70930..71064,71144..71236,71338..71457,71543..71677,71767..71859,71935..72054,72190..72382,72463..73271))
location: region:63625-73271:-1
so has part: feature:72463-73271:-1:exon
so has part: feature:72190-72382:-1:exon
so has part: feature:71935-72054:-1:exon
so has part: feature:71767-71859:-1:exon
so has part: feature:71543-71677:-1:exon
so has part: feature:71338-71457:-1:exon
so has part: feature:71144-71236:-1:exon
so has part: feature:70930-71064:-1:exon
so has part: feature:70692-70785:-1:exon
so has part: feature:70516-70609:-1:exon
so has part: feature:70322-70391:-1:exon
so has part: feature:69916-70049:-1:exon
so has part: feature:69451-69616:-1:exon
so has part: feature:69190-69373:-1:exon
so has part: feature:69004-69075:-1:exon
so has part: feature:68805-68928:-1:exon
so has part: feature:68458-68573:-1:exon
so has part: feature:68313-68353:-1:exon
so has part: feature:67727-67810:-1:exon
so has part: feature:67584-67652:-1:exon
so has part: feature:67431-67500:-1:exon
so has part: feature:66566-66673:-1:exon
so has part: feature:66434-66474:-1:exon
so has part: feature:66315-66342:-1:exon
so has part: feature:66128-66217:-1:exon
so has part: feature:65962-66050:-1:exon
so has part: feature:65779-65889:-1:exon
so has part: feature:65247-65704:-1:exon
so has part: feature:64340-64469:-1:exon
so has part: feature:64054-64100:-1:exon
so has part: feature:63733-63839:-1:exon
so has part: feature:63625-63644:-1:exon

XP_031412340.1
type: Protein
SIO_000068: ncbiprotein

position:73271:-1
position: 73271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72463-73271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72190-72382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71935-72054:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71767-71859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:71543-71677:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71338-71457:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:71144-71236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:70930-71064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:70692-70785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:70516-70609:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:70322-70391:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:69916-70049:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:69451-69616:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:69190-69373:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:69004-69075:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:68805-68928:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:68458-68573:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:68313-68353:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:67727-67810:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:67584-67652:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:67431-67500:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:66566-66673:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:66434-66474:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:66315-66342:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:66128-66217:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:65962-66050:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:65779-65889:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:65247-65704:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:64340-64469:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:64054-64100:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:63733-63839:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:63625-63644:-1:exon

SPAG5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SPAG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(74250..75170)
location: region:74250-75170:-1
so has part: feature:74250-75170:-1:exon
subclass of: SO_0000010

104913843
type: Gene
SIO_000068: ncbigene

position:74250:-1
position: 74250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75170:-1
position: 75170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74250-75170:-1:exon

SPAG5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SPAG5
product: sperm associated antigen 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 219 samples with support for all annotated introns
transcript id: XM_010721707.2
SIO_010081: SPAG5
subclass of: SO_0000673
so part of: SPAG5
location: complement(join(74250..74416,74501..74581,74655..74729,74824..74967,75064..75170))
location: region:74250-75170:-1
so has part: feature:75064-75170:-1:exon
so has part: feature:74824-74967:-1:exon
so has part: feature:74655-74729:-1:exon
so has part: feature:74501-74581:-1:exon
so has part: feature:74250-74416:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:75064-75170:-1:exon

position:75064:-1
position: 75064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:74824-74967:-1:exon

position:74824:-1
position: 74824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74967:-1
position: 74967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:74655-74729:-1:exon

position:74655:-1
position: 74655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74729:-1
position: 74729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74501-74581:-1:exon

position:74501:-1
position: 74501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74581:-1
position: 74581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:74250-74416:-1:exon

position:74416:-1
position: 74416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPAG5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SPAG5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 5
translation: MLQLIDKSEEVMRLQEEVTQLKRSLQRAETEAKVLWEEMRGQEAKGVSAHVQERVLLRQEVDKLRLLLLEKEDENVVVSGNYLEQVRGLELRLSHAQKMLRNHEELQEKVKEVLLSLPEVPPELSALLQHLGLKPNSEKSPALL
SIO_010081: SPAG5
subclass of: SO_0000673
so part of: SPAG5
location: complement(join(74318..74416,74501..74581,74655..74729,74824..74967,75064..75099))
location: region:74318-75099:-1
so has part: feature:75064-75099:-1:exon
so has part: feature:74824-74967:-1:exon
so has part: feature:74655-74729:-1:exon
so has part: feature:74501-74581:-1:exon
so has part: feature:74318-74416:-1:exon

XP_010720009.1
type: Protein
SIO_000068: ncbiprotein

position:74318:-1
position: 74318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75099:-1
position: 75099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75064-75099:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74824-74967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74655-74729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:74501-74581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:74318-74416:-1:exon

ALDOC
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ALDOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(76984..80680)
location: region:76984-80680:-1
so has part: feature:76984-80680:-1:exon
subclass of: SO_0000010

100540715
type: Gene
SIO_000068: ncbigene

position:76984:-1
position: 76984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80680:-1
position: 80680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:76984-80680:-1:exon

ALDOC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ALDOC
product: aldolase, fructose-bisphosphate C
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003211757.4
SIO_010081: ALDOC
subclass of: SO_0000673
so part of: ALDOC
location: complement(join(76984..77415,77877..78076,78159..78333,78413..78496,78993..79153,79222..79276,79361..79572,79670..79789,80562..80680))
location: region:76984-80680:-1
so has part: feature:80562-80680:-1:exon
so has part: feature:79670-79789:-1:exon
so has part: feature:79361-79572:-1:exon
so has part: feature:79222-79276:-1:exon
so has part: feature:78993-79153:-1:exon
so has part: feature:78413-78496:-1:exon
so has part: feature:78159-78333:-1:exon
so has part: feature:77877-78076:-1:exon
so has part: feature:76984-77415:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:80562-80680:-1:exon

position:80562:-1
position: 80562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:79670-79789:-1:exon

position:79670:-1
position: 79670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79789:-1
position: 79789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79361-79572:-1:exon

position:79361:-1
position: 79361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79572:-1
position: 79572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:79222-79276:-1:exon

position:79222:-1
position: 79222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79276:-1
position: 79276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:78993-79153:-1:exon

position:78993:-1
position: 78993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79153:-1
position: 79153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:78413-78496:-1:exon

position:78413:-1
position: 78413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78496:-1
position: 78496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:78159-78333:-1:exon

position:78159:-1
position: 78159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78333:-1
position: 78333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:77877-78076:-1:exon

position:77877:-1
position: 77877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78076:-1
position: 78076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:76984-77415:-1:exon

position:77415:-1
position: 77415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALDOC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ALDOC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fructose-bisphosphate aldolase C
translation: MTHQYPALTAEQKKELSDIALRIVAPGKGILAADESVGSMAKRLNQIGVENTEENRRLYRQILFSADSRVKKCIGGVIFFHETMYQKADDGTPFVQMIKDKGIVVGIKVDKGVVPLAGTDGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKISDNTPSALAIMENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHVYLEGTLLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY
SIO_010081: ALDOC
subclass of: SO_0000673
so part of: ALDOC
location: complement(join(77320..77415,77877..78076,78159..78333,78413..78496,78993..79153,79222..79276,79361..79572,79670..79781))
location: region:77320-79781:-1
so has part: feature:79670-79781:-1:exon
so has part: feature:79361-79572:-1:exon
so has part: feature:79222-79276:-1:exon
so has part: feature:78993-79153:-1:exon
so has part: feature:78413-78496:-1:exon
so has part: feature:78159-78333:-1:exon
so has part: feature:77877-78076:-1:exon
so has part: feature:77320-77415:-1:exon

XP_003211805.1
type: Protein
SIO_000068: ncbiprotein

position:77320:-1
position: 77320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79781:-1
position: 79781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79670-79781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:79361-79572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79222-79276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:78993-79153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:78413-78496:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:78159-78333:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:77877-78076:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:77320-77415:-1:exon

UNC119
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: UNC119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(81200..92716)
location: region:81200-92716:-1
so has part: feature:81200-92716:-1:exon
subclass of: SO_0000010

100543490
type: Gene
SIO_000068: ncbigene

position:81200:-1
position: 81200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92716:-1
position: 92716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:81200-92716:-1:exon

UNC119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UNC119
product: unc-119 lipid binding chaperone, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_010721875.3
SIO_010081: UNC119
subclass of: SO_0000673
so part of: UNC119
location: complement(join(81200..84099,84459..84631,85618..85720,86695..86808,92236..92716))
location: region:81200-92716:-1
so has part: feature:92236-92716:-1:exon
so has part: feature:86695-86808:-1:exon
so has part: feature:85618-85720:-1:exon
so has part: feature:84459-84631:-1:exon
so has part: feature:81200-84099:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:92236-92716:-1:exon

position:92236:-1
position: 92236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86695-86808:-1:exon

position:86695:-1
position: 86695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86808:-1
position: 86808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85618-85720:-1:exon

position:85618:-1
position: 85618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85720:-1
position: 85720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:84459-84631:-1:exon

position:84459:-1
position: 84459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84631:-1
position: 84631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:81200-84099:-1:exon

position:84099:-1
position: 84099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UNC119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UNC119
product: unc-119 lipid binding chaperone, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019621875.1
SIO_010081: UNC119
subclass of: SO_0000673
so part of: UNC119
location: complement(join(81200..84099,84459..84631,85618..85720,86695..86808,86904..87365))
location: region:81200-87365:-1
so has part: feature:86904-87365:-1:exon
so has part: feature:86695-86808:-1:exon
so has part: feature:85618-85720:-1:exon
so has part: feature:84459-84631:-1:exon
so has part: feature:81200-84099:-1:exon

position:87365:-1
position: 87365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86904-87365:-1:exon

position:86904:-1
position: 86904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:86695-86808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85618-85720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84459-84631:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:81200-84099:-1:exon

UNC119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UNC119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-119 homolog A isoform X1
translation: MLSGCGEGRWERCRAVLPAALGCAVPCRGAVRAGGGAAPPGAAGPAAALSGVDHTGGGGGGGGGGAMKVKKSGGAGGAAARTEEELGRKALIGPDDVLGLQRVTSDYLCTPEENVYKIDFTRFKIRDMESGTVLFEITKPAASEREHNDKKDIDPNAGRFVRYQFTPAFLRLRQVGATVEFTVGDKPINNFRMIERHYFRDQLLKSFDFEFGFCIPSSKNTCEHIYEFPQLSEDLIREMILHPYETQSDSFYFVDNKLVMHNKADYSYSGGP
SIO_010081: UNC119
subclass of: SO_0000673
so part of: UNC119
location: complement(join(83987..84099,84459..84631,85618..85720,86695..86808,92236..92551))
location: region:83987-92551:-1
so has part: feature:92236-92551:-1:exon
so has part: feature:86695-86808:-1:exon
so has part: feature:85618-85720:-1:exon
so has part: feature:84459-84631:-1:exon
so has part: feature:83987-84099:-1:exon

XP_010720177.1
type: Protein
SIO_000068: ncbiprotein

position:83987:-1
position: 83987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92551:-1
position: 92551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92236-92551:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86695-86808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85618-85720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84459-84631:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83987-84099:-1:exon

UNC119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UNC119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-119 homolog A isoform X2
translation: MDPGATGTKLGKDYLCTPEENVYKIDFTRFKIRDMESGTVLFEITKPAASEREHNDKKDIDPNAGRFVRYQFTPAFLRLRQVGATVEFTVGDKPINNFRMIERHYFRDQLLKSFDFEFGFCIPSSKNTCEHIYEFPQLSEDLIREMILHPYETQSDSFYFVDNKLVMHNKADYSYSGGP
SIO_010081: UNC119
subclass of: SO_0000673
so part of: UNC119
location: complement(join(83987..84099,84459..84631,85618..85720,86695..86808,86904..86940))
location: region:83987-86940:-1
so has part: feature:86904-86940:-1:exon
so has part: feature:86695-86808:-1:exon
so has part: feature:85618-85720:-1:exon
so has part: feature:84459-84631:-1:exon
so has part: feature:83987-84099:-1:exon

XP_019477420.1
type: Protein
SIO_000068: ncbiprotein

position:86940:-1
position: 86940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86904-86940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:86695-86808:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85618-85720:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84459-84631:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:83987-84099:-1:exon

PIGS
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PIGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(92802..>96368)
location: region:92802-96368:-1
so has part: feature:92802-96368:-1:exon
subclass of: SO_0000010

100543641
type: Gene
SIO_000068: ncbigene

position:92802:-1
position: 92802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96368:-1
position: 96368
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92802-96368:-1:exon

PIGS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PIGS
product: phosphatidylinositol glycan anchor biosynthesis class S
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XM_010721876.2
SIO_010081: PIGS
subclass of: SO_0000673
so part of: PIGS
location: complement(join(92802..93426,93571..93781,94124..94224,94303..94448,94692..94806,94908..95050,95379..95577,95887..95978,96191..96280,96356..>96368))
location: region:92802-96368:-1
so has part: feature:96356-96368:-1:exon
so has part: feature:96191-96280:-1:exon
so has part: feature:95887-95978:-1:exon
so has part: feature:95379-95577:-1:exon
so has part: feature:94908-95050:-1:exon
so has part: feature:94692-94806:-1:exon
so has part: feature:94303-94448:-1:exon
so has part: feature:94124-94224:-1:exon
so has part: feature:93571-93781:-1:exon
so has part: feature:92802-93426:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96356-96368:-1:exon

position:96356:-1
position: 96356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:96191-96280:-1:exon

position:96191:-1
position: 96191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96280:-1
position: 96280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95887-95978:-1:exon

position:95887:-1
position: 95887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95978:-1
position: 95978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:95379-95577:-1:exon

position:95379:-1
position: 95379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95577:-1
position: 95577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:94908-95050:-1:exon

position:94908:-1
position: 94908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95050:-1
position: 95050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:94692-94806:-1:exon

position:94692:-1
position: 94692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94806:-1
position: 94806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:94303-94448:-1:exon

position:94303:-1
position: 94303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94448:-1
position: 94448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94124-94224:-1:exon

position:94124:-1
position: 94124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94224:-1
position: 94224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:93571-93781:-1:exon

position:93571:-1
position: 93571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93781:-1
position: 93781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:92802-93426:-1:exon

position:93426:-1
position: 93426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIGS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PIGS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI transamidase component PIG-S
translation: PPVSSRSDVTSRIETAYRGTTAREEAALGAATVREADAALHAMQDSPPGSLTVYVVPEASSLLPQGINVYVGKHRSALVRAGQGLATLHSRLQQLMQVMSFTASSIAAALSDRVPDGQLGPDAWRHLKSSLGYEITFSLLNPDPKSHDVDWDIEGAVKRYVQPILDKLNLVANFSVDSQILYYAVLGVTPRFDKESSSFILSAHSLPHVINPVEARLGSSAASLYPVLNFLLYVPERSHSPLYIQDKDGTPVATNAFHSPRWGGIMIYNVEVPASSQTSLPLRVDVDMLRVMEVFLAQLRLLFGISQEELPPEFLVESPGNEGLADWELDRLLWAHTLENIATVSTTLTSLAQLLDQISNIVIKDDVASEVYRAVAAAQDAVAELAEGRLHSAFQASKEAVTSSERAFFDPSLLHLLYFPDDQKFAIYIPLFLPMAVPILLSLAKMLREARQNKKEPTKMD
SIO_010081: PIGS
subclass of: SO_0000673
so part of: PIGS
location: complement(join(93151..93426,93571..93781,94124..94224,94303..94448,94692..94806,94908..95050,95379..95577,95887..95978,96191..96280,96356..>96368))
location: region:93151-96368:-1
so has part: feature:96356-96368:-1:exon
so has part: feature:96191-96280:-1:exon
so has part: feature:95887-95978:-1:exon
so has part: feature:95379-95577:-1:exon
so has part: feature:94908-95050:-1:exon
so has part: feature:94692-94806:-1:exon
so has part: feature:94303-94448:-1:exon
so has part: feature:94124-94224:-1:exon
so has part: feature:93571-93781:-1:exon
so has part: feature:93151-93426:-1:exon

XP_010720178.1
type: Protein
SIO_000068: ncbiprotein

position:93151:-1
position: 93151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96356-96368:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:96191-96280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:95887-95978:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95379-95577:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:94908-95050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:94692-94806:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:94303-94448:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94124-94224:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:93571-93781:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:93151-93426:-1:exon

FOXN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FOXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 105381..118593
location: region:105381-118593:1
so has part: feature:105381-118593:1:exon
subclass of: SO_0000010

100543332
type: Gene
SIO_000068: ncbigene

position:105381:1
position: 105381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118593:1
position: 118593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105381-118593:1:exon

FOXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FOXN1
product: forkhead box N1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010721708.2
SIO_010081: FOXN1
subclass of: SO_0000673
so part of: FOXN1
location: join(105381..105537,107010..107513,108680..108790,110985..111112,112047..112143,115829..116036,116499..117026,118188..118593)
location: region:105381-118593:1
so has part: feature:105381-105537:1:exon
so has part: feature:107010-107513:1:exon
so has part: feature:108680-108790:1:exon
so has part: feature:110985-111112:1:exon
so has part: feature:112047-112143:1:exon
so has part: feature:115829-116036:1:exon
so has part: feature:116499-117026:1:exon
so has part: feature:118188-118593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105381-105537:1:exon

position:105537:1
position: 105537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:107010-107513:1:exon

position:107010:1
position: 107010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107513:1
position: 107513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:108680-108790:1:exon

position:108680:1
position: 108680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108790:1
position: 108790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:110985-111112:1:exon

position:110985:1
position: 110985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:111112:1
position: 111112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:112047-112143:1:exon

position:112047:1
position: 112047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112143:1
position: 112143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:115829-116036:1:exon

position:115829:1
position: 115829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:116036:1
position: 116036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:116499-117026:1:exon

position:116499:1
position: 116499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117026:1
position: 117026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:118188-118593:1:exon

position:118188:1
position: 118188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FOXN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FOXN1
product: forkhead box N1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010721709.2
SIO_010081: FOXN1
subclass of: SO_0000673
so part of: FOXN1
location: join(105381..105537,107010..107513,108683..108790,110985..111112,112047..112143,115829..116036,116499..117026,118188..118593)
location: region:105381-118593:1
so has part: feature:105381-105537:1:exon
so has part: feature:107010-107513:1:exon
so has part: feature:108683-108790:1:exon
so has part: feature:110985-111112:1:exon
so has part: feature:112047-112143:1:exon
so has part: feature:115829-116036:1:exon
so has part: feature:116499-117026:1:exon
so has part: feature:118188-118593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105381-105537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107010-107513:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108683-108790:1:exon

position:108683:1
position: 108683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:110985-111112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112047-112143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115829-116036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116499-117026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118188-118593:1:exon

FOXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FOXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein N1 isoform X1
translation: MVSLLQDQSNIKFSSSDTLERDQQEDLMKTPGDSVSPIQQTDNPSYNCQPYESDSRTERKSSESSHSPSPASPAQDQLLGRYPPSQGIHCSKNKFQVSFSTEKFRRYSYEENTVGNYDRFLKSSRNPFHPYKRQISEDVFQEAQQALPPEGPSFKNTRSIEGFEGLPGSTGPDESESFPTHLPNISSEQPWCNSLQYSTTGQDHTSQVMQDSDLKLRTSPLEGQPGLYCYQPQVQQMYCSSHPFHQYPSGGSYPVTYITSSHYPYQRIAPQSTQESQQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKSGNSSRKGCLWALNPAKIDKMQEELQKWKRKDPVAVRKSMAKPEELDTLIGDKGEKLRSSMMSCSPNGVAGASLSRQMAVQPHSLGEPSLSSIPQPLHPIHTSSGALHAKNTLPNLLGGQQTACYTAPQGFPPISSALMPQTPDHQTMFPSGEAPNELRGQPSITQDSPLPAQTPPSCGVKVMTEHCTARTVPDPLLQEGDLSNDIDALNPSLTDFDLQGNLWEELKDDSLAVDPLVLISSSPTSSQCFPSHCQMENSNTATIPNGTPHSNLPDLQLTTLYSAFMELDTVSPAYLSNPGSKPIALM
SIO_010081: FOXN1
subclass of: SO_0000673
so part of: FOXN1
location: join(105415..105537,107010..107513,108680..108790,110985..111112,112047..112143,115829..116036,116499..117026,118188..118450)
location: region:105415-118450:1
so has part: feature:105415-105537:1:exon
so has part: feature:107010-107513:1:exon
so has part: feature:108680-108790:1:exon
so has part: feature:110985-111112:1:exon
so has part: feature:112047-112143:1:exon
so has part: feature:115829-116036:1:exon
so has part: feature:116499-117026:1:exon
so has part: feature:118188-118450:1:exon

XP_010720010.1
type: Protein
SIO_000068: ncbiprotein

position:105415:1
position: 105415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:118450:1
position: 118450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105415-105537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107010-107513:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108680-108790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110985-111112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112047-112143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115829-116036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116499-117026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118188-118450:1:exon

FOXN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FOXN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein N1 isoform X2
translation: MVSLLQDQSNIKFSSSDTLERDQQEDLMKTPGDSVSPIQQTDNPSYNCQPYESDSRTERKSSESSHSPSPASPAQDQLLGRYPPSQGIHCSKNKFQVSFSTEKFRRYSYEENTVGNYDRFLKSSRNPFHPYKRQISEDVFQEAQQALPPEGPSFKNTRSIEGFEGLPGSTGPDESESFPTHLPNISSEQPWCNSLQYSTTGQDHTSQVMDSDLKLRTSPLEGQPGLYCYQPQVQQMYCSSHPFHQYPSGGSYPVTYITSSHYPYQRIAPQSTQESQQPLFPKPIYSYSILIFMALKNSKTGSLPVSEIYNFMTEHFPYFKTAPDGWKNSVRHNLSLNKCFEKVENKSGNSSRKGCLWALNPAKIDKMQEELQKWKRKDPVAVRKSMAKPEELDTLIGDKGEKLRSSMMSCSPNGVAGASLSRQMAVQPHSLGEPSLSSIPQPLHPIHTSSGALHAKNTLPNLLGGQQTACYTAPQGFPPISSALMPQTPDHQTMFPSGEAPNELRGQPSITQDSPLPAQTPPSCGVKVMTEHCTARTVPDPLLQEGDLSNDIDALNPSLTDFDLQGNLWEELKDDSLAVDPLVLISSSPTSSQCFPSHCQMENSNTATIPNGTPHSNLPDLQLTTLYSAFMELDTVSPAYLSNPGSKPIALM
SIO_010081: FOXN1
subclass of: SO_0000673
so part of: FOXN1
location: join(105415..105537,107010..107513,108683..108790,110985..111112,112047..112143,115829..116036,116499..117026,118188..118450)
location: region:105415-118450:1
so has part: feature:105415-105537:1:exon
so has part: feature:107010-107513:1:exon
so has part: feature:108683-108790:1:exon
so has part: feature:110985-111112:1:exon
so has part: feature:112047-112143:1:exon
so has part: feature:115829-116036:1:exon
so has part: feature:116499-117026:1:exon
so has part: feature:118188-118450:1:exon

XP_010720011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:105415-105537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:107010-107513:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:108683-108790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:110985-111112:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:112047-112143:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:115829-116036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:116499-117026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:118188-118450:1:exon

LOC104913844
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913844
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(108911..113910)
location: region:108911-113910:-1
so has part: feature:108911-113910:-1:exon
subclass of: SO_0000011

104913844
type: Gene
SIO_000068: ncbigene

position:108911:-1
position: 108911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113910:-1
position: 113910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:108911-113910:-1:exon

LOC104913844
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913844
product: uncharacterized LOC104913844
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004161763.1
SIO_010081: LOC104913844
subclass of: SO_0000673
so part of: LOC104913844
location: complement(join(108911..109037,110254..110365,112380..112557,113320..113910))
location: region:108911-113910:-1
so has part: feature:113320-113910:-1:exon
so has part: feature:112380-112557:-1:exon
so has part: feature:110254-110365:-1:exon
so has part: feature:108911-109037:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113320-113910:-1:exon

position:113320:-1
position: 113320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:112380-112557:-1:exon

position:112380:-1
position: 112380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:112557:-1
position: 112557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:110254-110365:-1:exon

position:110254:-1
position: 110254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110365:-1
position: 110365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:108911-109037:-1:exon

position:109037:-1
position: 109037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC13A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC13A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 140215..148144
location: region:140215-148144:1
so has part: feature:140215-148144:1:exon
subclass of: SO_0000010

104913845
type: Gene
SIO_000068: ncbigene

position:140215:1
position: 140215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148144:1
position: 148144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140215-148144:1:exon

SLC13A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC13A2
product: solute carrier family 13 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_010721710.3
SIO_010081: SLC13A2
subclass of: SO_0000673
so part of: SLC13A2
location: join(140215..140372,140703..140839,141490..141716,142372..142552,142765..142887,143765..143986,144344..144429,145072..145193,145669..145830,146745..146882,147245..148144)
location: region:140215-148144:1
so has part: feature:140215-140372:1:exon
so has part: feature:140703-140839:1:exon
so has part: feature:141490-141716:1:exon
so has part: feature:142372-142552:1:exon
so has part: feature:142765-142887:1:exon
so has part: feature:143765-143986:1:exon
so has part: feature:144344-144429:1:exon
so has part: feature:145072-145193:1:exon
so has part: feature:145669-145830:1:exon
so has part: feature:146745-146882:1:exon
so has part: feature:147245-148144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:140215-140372:1:exon

position:140372:1
position: 140372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:140703-140839:1:exon

position:140703:1
position: 140703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140839:1
position: 140839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:141490-141716:1:exon

position:141490:1
position: 141490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141716:1
position: 141716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:142372-142552:1:exon

position:142372:1
position: 142372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142552:1
position: 142552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:142765-142887:1:exon

position:142765:1
position: 142765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142887:1
position: 142887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:143765-143986:1:exon

position:143765:1
position: 143765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143986:1
position: 143986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:144344-144429:1:exon

position:144344:1
position: 144344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144429:1
position: 144429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:145072-145193:1:exon

position:145072:1
position: 145072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145193:1
position: 145193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:145669-145830:1:exon

position:145669:1
position: 145669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145830:1
position: 145830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:146745-146882:1:exon

position:146745:1
position: 146745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146882:1
position: 146882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:147245-148144:1:exon

position:147245:1
position: 147245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC13A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC13A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 13 member 2
translation: MALLWCTEALPLAVTALLPVLLFPMMNIMDSTAVCREYLKDTNMLFIGGLLMAIAIENWNLHKRVALRVLLITGVRPALLLMGFMLVTAFLSMWISNTATTAMMVPIAQAVLDQLHQSEVGSEAANQVLENDNKAFELQEEPTKSNSFKETEEKGNNHVLAVEEGKERNEHPVDEKHKKLCKGMSLSICYAASIGGIATLTGTTPNLVLKGQVDEIFPNNDNVINFASWFSFAFPTMVVLLILAWIWLQILYLGFNFQKNFGCVRDPSAKTKEKQAYQIIKDENKKLGSMKFAEIAVLVLFILLVLLWFTRDPGFIPGWATVLFNKNDTSFVSDATVAIFISLLLFIIPSEFAIKKQTGSETKIRAPPALLNWKVVHKKMPWNIVFLLGGGFALAKGSEESGLSGWLGTKLTPLEHIPHPAIAFLLCLLIATFTECASNVATTTLFLPILASMAQSICLNPLYVMLPCTLSASLAFMLPVATPPNAIVFSYGHLKVIDMAKAGFVLNILGVLTINLAINTWASSLFQLNTYPSWANSTYC
SIO_010081: SLC13A2
subclass of: SO_0000673
so part of: SLC13A2
location: join(140274..140372,140703..140839,141490..141716,142372..142552,142765..142887,143765..143986,144344..144429,145072..145193,145669..145830,146745..146882,147245..147370)
location: region:140274-147370:1
so has part: feature:140274-140372:1:exon
so has part: feature:140703-140839:1:exon
so has part: feature:141490-141716:1:exon
so has part: feature:142372-142552:1:exon
so has part: feature:142765-142887:1:exon
so has part: feature:143765-143986:1:exon
so has part: feature:144344-144429:1:exon
so has part: feature:145072-145193:1:exon
so has part: feature:145669-145830:1:exon
so has part: feature:146745-146882:1:exon
so has part: feature:147245-147370:1:exon

XP_010720012.1
type: Protein
SIO_000068: ncbiprotein

position:140274:1
position: 140274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147370:1
position: 147370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:140274-140372:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:140703-140839:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:141490-141716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:142372-142552:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:142765-142887:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:143765-143986:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:144344-144429:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:145072-145193:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:145669-145830:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:146745-146882:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:147245-147370:1:exon

LOC104913846
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913846
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(153981..156824)
location: region:153981-156824:-1
so has part: feature:153981-156824:-1:exon
subclass of: SO_0000011

104913846
type: Gene
SIO_000068: ncbigene

position:153981:-1
position: 153981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156824:-1
position: 156824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153981-156824:-1:exon

LOC104913846
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913846
product: uncharacterized LOC104913846
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_795661.2
SIO_010081: LOC104913846
subclass of: SO_0000673
so part of: LOC104913846
location: complement(join(153981..154158,155347..156125,156500..156824))
location: region:153981-156824:-1
so has part: feature:156500-156824:-1:exon
so has part: feature:155347-156125:-1:exon
so has part: feature:153981-154158:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:156500-156824:-1:exon

position:156500:-1
position: 156500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:155347-156125:-1:exon

position:155347:-1
position: 155347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156125:-1
position: 156125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:153981-154158:-1:exon

position:154158:-1
position: 154158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM199
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TMEM199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 157016..159294
location: region:157016-159294:1
so has part: feature:157016-159294:1:exon
subclass of: SO_0000010

100542554
type: Gene
SIO_000068: ncbigene

position:157016:1
position: 157016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159294:1
position: 159294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157016-159294:1:exon

TMEM199
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TMEM199
product: transmembrane protein 199
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003211769.4
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(157016..157266,157344..157417,157494..157583,158401..158437,158766..158878,159003..159294)
location: region:157016-159294:1
so has part: feature:157016-157266:1:exon
so has part: feature:157344-157417:1:exon
so has part: feature:157494-157583:1:exon
so has part: feature:158401-158437:1:exon
so has part: feature:158766-158878:1:exon
so has part: feature:159003-159294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157016-157266:1:exon

position:157266:1
position: 157266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157344-157417:1:exon

position:157344:1
position: 157344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157417:1
position: 157417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157494-157583:1:exon

position:157494:1
position: 157494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157583:1
position: 157583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:158401-158437:1:exon

position:158401:1
position: 158401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158437:1
position: 158437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:158766-158878:1:exon

position:158766:1
position: 158766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158878:1
position: 158878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:159003-159294:1:exon

position:159003:1
position: 159003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM199
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TMEM199
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 199
translation: MASMIRAGARLRRAVESEELSGLPPALRDELREAVASKGSLVPFSLLRRLHSGLREAGSPLFLHELLRDSDIALPEVPVQPRNPELVARLEQIKAKLANEEYRRMTRNVTRQDNHGTLAEFGRQVRSVKAVVITIFNFFVTVVAAFACTYLGSQYVFVETAARVLSAVIVASVVGLAELYVMVRTIEGDLGKL
SIO_010081: TMEM199
subclass of: SO_0000673
so part of: TMEM199
location: join(157095..157266,157344..157417,157494..157583,158401..158437,158766..158878,159003..159098)
location: region:157095-159098:1
so has part: feature:157095-157266:1:exon
so has part: feature:157344-157417:1:exon
so has part: feature:157494-157583:1:exon
so has part: feature:158401-158437:1:exon
so has part: feature:158766-158878:1:exon
so has part: feature:159003-159098:1:exon

XP_003211817.2
type: Protein
SIO_000068: ncbiprotein

position:157095:1
position: 157095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159098:1
position: 159098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157095-157266:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157344-157417:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157494-157583:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:158401-158437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:158766-158878:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159003-159098:1:exon

SEBOX
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SEBOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(160098..161185)
location: region:160098-161185:-1
so has part: feature:160098-161185:-1:exon
subclass of: SO_0000010

100542712
type: Gene
SIO_000068: ncbigene

position:160098:-1
position: 160098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:161185:-1
position: 161185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160098-161185:-1:exon

SEBOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SEBOX
product: SEBOX homeobox
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003211770.4
SIO_010081: SEBOX
subclass of: SO_0000673
so part of: SEBOX
location: complement(join(160098..160331,160458..160717,161176..161185))
location: region:160098-161185:-1
so has part: feature:161176-161185:-1:exon
so has part: feature:160458-160717:-1:exon
so has part: feature:160098-160331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:161176-161185:-1:exon

position:161176:-1
position: 161176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:160458-160717:-1:exon

position:160458:-1
position: 160458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160717:-1
position: 160717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:160098-160331:-1:exon

position:160331:-1
position: 160331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEBOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SEBOX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein SEBOX
translation: MGGAQPQTPPAPHSRCSASPTGRAVLRRGQRTELRGPSPCPGGPRKRRRTTFSRGQLSELERAFAAVPYPDIATRERLAELTQLPEAKIQVWFQNRRARRIRSAKPEPPLSPPPGEQDPPVVTPESTIPVPTLPPLRAHSPAWGLPTSLGSISDLIYSAAITNLGEP
SIO_010081: SEBOX
subclass of: SO_0000673
so part of: SEBOX
location: complement(join(160098..160331,160458..160717,161176..161185))
location: region:160098-161185:-1
so has part: feature:161176-161185:-1:exon
so has part: feature:160458-160717:-1:exon
so has part: feature:160098-160331:-1:exon

XP_003211818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161176-161185:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:160458-160717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:160098-160331:-1:exon

KIF12
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KIF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 160711..165038
location: region:160711-165038:1
so has part: feature:160711-165038:1:exon
subclass of: SO_0000010

100542868
type: Gene
SIO_000068: ncbigene

position:160711:1
position: 160711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165038:1
position: 165038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160711-165038:1:exon

KIF12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KIF12
product: kinesin family member 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019621877.2
SIO_010081: KIF12
subclass of: SO_0000673
so part of: KIF12
location: join(160711..161412,161644..161697,161786..161864,161938..162059,162192..162267,162351..162467,162535..163186,163266..163384,163467..163571,163650..163909,164043..164196,164271..164327,164418..164491,164570..164697,164775..165038)
location: region:160711-165038:1
so has part: feature:160711-161412:1:exon
so has part: feature:161644-161697:1:exon
so has part: feature:161786-161864:1:exon
so has part: feature:161938-162059:1:exon
so has part: feature:162192-162267:1:exon
so has part: feature:162351-162467:1:exon
so has part: feature:162535-163186:1:exon
so has part: feature:163266-163384:1:exon
so has part: feature:163467-163571:1:exon
so has part: feature:163650-163909:1:exon
so has part: feature:164043-164196:1:exon
so has part: feature:164271-164327:1:exon
so has part: feature:164418-164491:1:exon
so has part: feature:164570-164697:1:exon
so has part: feature:164775-165038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160711-161412:1:exon

position:161412:1
position: 161412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161644-161697:1:exon

position:161644:1
position: 161644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161697:1
position: 161697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:161786-161864:1:exon

position:161786:1
position: 161786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161864:1
position: 161864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:161938-162059:1:exon

position:161938:1
position: 161938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162059:1
position: 162059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:162192-162267:1:exon

position:162192:1
position: 162192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162267:1
position: 162267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:162351-162467:1:exon

position:162351:1
position: 162351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162467:1
position: 162467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:162535-163186:1:exon

position:162535:1
position: 162535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163186:1
position: 163186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:163266-163384:1:exon

position:163266:1
position: 163266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163384:1
position: 163384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:163467-163571:1:exon

position:163467:1
position: 163467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163571:1
position: 163571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:163650-163909:1:exon

position:163650:1
position: 163650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163909:1
position: 163909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:164043-164196:1:exon

position:164043:1
position: 164043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164196:1
position: 164196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:164271-164327:1:exon

position:164271:1
position: 164271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164327:1
position: 164327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:164418-164491:1:exon

position:164418:1
position: 164418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164491:1
position: 164491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:164570-164697:1:exon

position:164570:1
position: 164570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164697:1
position: 164697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:164775-165038:1:exon

position:164775:1
position: 164775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KIF12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KIF12
product: kinesin family member 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019621878.2
SIO_010081: KIF12
subclass of: SO_0000673
so part of: KIF12
location: join(160711..161412,161644..161697,161786..161864,161938..162059,162192..162267,162351..162467,162535..163186,163266..163384,163467..163571,163650..163909,164043..164196,164271..164327,164418..164491,164579..164697,164775..165038)
location: region:160711-165038:1
so has part: feature:160711-161412:1:exon
so has part: feature:161644-161697:1:exon
so has part: feature:161786-161864:1:exon
so has part: feature:161938-162059:1:exon
so has part: feature:162192-162267:1:exon
so has part: feature:162351-162467:1:exon
so has part: feature:162535-163186:1:exon
so has part: feature:163266-163384:1:exon
so has part: feature:163467-163571:1:exon
so has part: feature:163650-163909:1:exon
so has part: feature:164043-164196:1:exon
so has part: feature:164271-164327:1:exon
so has part: feature:164418-164491:1:exon
so has part: feature:164579-164697:1:exon
so has part: feature:164775-165038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160711-161412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161644-161697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161786-161864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161938-162059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162192-162267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162351-162467:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162535-163186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:163266-163384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163467-163571:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:163650-163909:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:164043-164196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:164271-164327:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:164418-164491:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164579-164697:1:exon

position:164579:1
position: 164579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:164775-165038:1:exon

KIF12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KIF12
product: kinesin family member 12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031556393.1
SIO_010081: KIF12
subclass of: SO_0000673
so part of: KIF12
location: join(160711..161412,161644..161697,161786..161864,161938..162059,162192..162267,162351..162467,162535..162670,162744..162835,163057..163186,163266..163384,163467..163571,163650..163909,164043..164196,164271..164327,164418..164491,164570..164697,164775..165038)
location: region:160711-165038:1
so has part: feature:160711-161412:1:exon
so has part: feature:161644-161697:1:exon
so has part: feature:161786-161864:1:exon
so has part: feature:161938-162059:1:exon
so has part: feature:162192-162267:1:exon
so has part: feature:162351-162467:1:exon
so has part: feature:162535-162670:1:exon
so has part: feature:162744-162835:1:exon
so has part: feature:163057-163186:1:exon
so has part: feature:163266-163384:1:exon
so has part: feature:163467-163571:1:exon
so has part: feature:163650-163909:1:exon
so has part: feature:164043-164196:1:exon
so has part: feature:164271-164327:1:exon
so has part: feature:164418-164491:1:exon
so has part: feature:164570-164697:1:exon
so has part: feature:164775-165038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:160711-161412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161644-161697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161786-161864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161938-162059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162192-162267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162351-162467:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162535-162670:1:exon

position:162670:1
position: 162670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:162744-162835:1:exon

position:162744:1
position: 162744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:162835:1
position: 162835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:163057-163186:1:exon

position:163057:1
position: 163057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:163266-163384:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:163467-163571:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:163650-163909:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:164043-164196:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164271-164327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164418-164491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:164570-164697:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:164775-165038:1:exon

KIF12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KIF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF12 isoform X1
translation: MEAEEERGWRPQAGTRPKMLPRSQLRLSPGEEQEGRETRLRVVLRVRPLTCTETRRGDRHAVHSLGNGIVHVSAARHDATFTFSAVFDGGASQEAVFEGSGMQQLVELAVEGFSCTVFAYGQTGSGKTYTLMGPLGQSDAPGLLGLMQRSFSCLLEQSRGTGLALSASYLEIYNEQVRDLLSAGPPRTLPLRWSKTRGFYVENQLSVDFESLEAVTELLLQGAGLWSWGMHGRYSPGPPAAFCSSRFPKATDLCARPQWALEPQPRHPDHPHPQPSSEPFPCCGDMGRDGGLGSGGVLQPQGWGCFLLPKDALMVLGRAARTASQTQEVTQRGRDGWDAGQHHHPNVPPQPGTSKQGTLCFVDLAGSEQVKDTGSSGELSVEANNINRSLLALGHCISLLAKPRGKRMHIPYRDSKLTRLLARSLDGSGITLMVACVSPSSRCLSETLSTLHYASRARKVTTRPMANRVPREKLLQTLEEEIQSLKLENLSLRQQLSLPRSREVPGAWPGWVGRYSLGGLHCPPLEGQVAAEGAPAWPSLYGLLRDFVVENEQLRQPQLPPGPSSGGIPTIPSCSQVPHRSIHIPLSHPSWPQHSNMMPTSTHRLPKLPPASSCPQCCTNAIVSQGSASLPLPAQDDGTVPSCWLQKGKRNQSRSWSSLRQHAVPQDSQETAGTEGRVVPSAPPWPGPPEPRAAGAIPVLQWEETSEWLEELI
SIO_010081: KIF12
subclass of: SO_0000673
so part of: KIF12
location: join(161333..161412,161644..161697,161786..161864,161938..162059,162192..162267,162351..162467,162535..163186,163266..163384,163467..163571,163650..163909,164043..164196,164271..164327,164418..164491,164570..164697,164775..164839)
location: region:161333-164839:1
so has part: feature:161333-161412:1:exon
so has part: feature:161644-161697:1:exon
so has part: feature:161786-161864:1:exon
so has part: feature:161938-162059:1:exon
so has part: feature:162192-162267:1:exon
so has part: feature:162351-162467:1:exon
so has part: feature:162535-163186:1:exon
so has part: feature:163266-163384:1:exon
so has part: feature:163467-163571:1:exon
so has part: feature:163650-163909:1:exon
so has part: feature:164043-164196:1:exon
so has part: feature:164271-164327:1:exon
so has part: feature:164418-164491:1:exon
so has part: feature:164570-164697:1:exon
so has part: feature:164775-164839:1:exon

XP_019477422.1
type: Protein
SIO_000068: ncbiprotein

position:161333:1
position: 161333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164839:1
position: 164839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161333-161412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161644-161697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161786-161864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161938-162059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162192-162267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162351-162467:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162535-163186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:163266-163384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163467-163571:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:163650-163909:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:164043-164196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:164271-164327:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:164418-164491:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164570-164697:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164775-164839:1:exon

KIF12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KIF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF12 isoform X2
translation: MEAEEERGWRPQAGTRPKMLPRSQLRLSPGEEQEGRETRLRVVLRVRPLTCTETRRGDRHAVHSLGNGIVHVSAARHDATFTFSAVFDGGASQEAVFEGSGMQQLVELAVEGFSCTVFAYGQTGSGKTYTLMGPLGQSDAPGLLGLMQRSFSCLLEQSRGTGLALSASYLEIYNEQVRDLLSAGPPRTLPLRWSKTRGFYVENQLSVDFESLEAVTELLLQGAGLWSWGMHGRYSPGPPAAFCSSRFPKATDLCARPQWALEPQPRHPDHPHPQPSSEPFPCCGDMGRDGGLGSGGVLQPQGWGCFLLPKDALMVLGRAARTASQTQEVTQRGRDGWDAGQHHHPNVPPQPGTSKQGTLCFVDLAGSEQVKDTGSSGELSVEANNINRSLLALGHCISLLAKPRGKRMHIPYRDSKLTRLLARSLDGSGITLMVACVSPSSRCLSETLSTLHYASRARKVTTRPMANRVPREKLLQTLEEEIQSLKLENLSLRQQLSLPRSREVPGAWPGWVGRYSLGGLHCPPLEGQVAAEGAPAWPSLYGLLRDFVVENEQLRQPQLPPGPSSGGIPTIPSCSQVPHRSIHIPLSHPSWPQHSNMMPTSTHRLPKLPPASSCPQCCTNAIVSQGSASLPLPAQDDGTVPSCWLQKGKRRSWSSLRQHAVPQDSQETAGTEGRVVPSAPPWPGPPEPRAAGAIPVLQWEETSEWLEELI
SIO_010081: KIF12
subclass of: SO_0000673
so part of: KIF12
location: join(161333..161412,161644..161697,161786..161864,161938..162059,162192..162267,162351..162467,162535..163186,163266..163384,163467..163571,163650..163909,164043..164196,164271..164327,164418..164491,164579..164697,164775..164839)
location: region:161333-164839:1
so has part: feature:161333-161412:1:exon
so has part: feature:161644-161697:1:exon
so has part: feature:161786-161864:1:exon
so has part: feature:161938-162059:1:exon
so has part: feature:162192-162267:1:exon
so has part: feature:162351-162467:1:exon
so has part: feature:162535-163186:1:exon
so has part: feature:163266-163384:1:exon
so has part: feature:163467-163571:1:exon
so has part: feature:163650-163909:1:exon
so has part: feature:164043-164196:1:exon
so has part: feature:164271-164327:1:exon
so has part: feature:164418-164491:1:exon
so has part: feature:164579-164697:1:exon
so has part: feature:164775-164839:1:exon

XP_019477423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161333-161412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161644-161697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161786-161864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161938-162059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162192-162267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162351-162467:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162535-163186:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:163266-163384:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163467-163571:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:163650-163909:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:164043-164196:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:164271-164327:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:164418-164491:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164579-164697:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164775-164839:1:exon

KIF12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KIF12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF12 isoform X3
translation: MEAEEERGWRPQAGTRPKMLPRSQLRLSPGEEQEGRETRLRVVLRVRPLTCTETRRGDRHAVHSLGNGIVHVSAARHDATFTFSAVFDGGASQEAVFEGSGMQQLVELAVEGFSCTVFAYGQTGSGKTYTLMGPLGQSDAPGLLGLMQRSFSCLLEQSRGTGLALSASYLEIYNEQVRDLLSAGPPRTLPLRWSKTRGFYVENQLSVDFESLEAVTELLLQGSQRRRTSAHALNGHSSRSHAILTIHIHNRAPGTSKQGTLCFVDLAGSEQVKDTGSSGELSVEANNINRSLLALGHCISLLAKPRGKRMHIPYRDSKLTRLLARSLDGSGITLMVACVSPSSRCLSETLSTLHYASRARKVTTRPMANRVPREKLLQTLEEEIQSLKLENLSLRQQLSLPRSREVPGAWPGWVGRYSLGGLHCPPLEGQVAAEGAPAWPSLYGLLRDFVVENEQLRQPQLPPGPSSGGIPTIPSCSQVPHRSIHIPLSHPSWPQHSNMMPTSTHRLPKLPPASSCPQCCTNAIVSQGSASLPLPAQDDGTVPSCWLQKGKRNQSRSWSSLRQHAVPQDSQETAGTEGRVVPSAPPWPGPPEPRAAGAIPVLQWEETSEWLEELI
SIO_010081: KIF12
subclass of: SO_0000673
so part of: KIF12
location: join(161333..161412,161644..161697,161786..161864,161938..162059,162192..162267,162351..162467,162535..162670,162744..162835,163057..163186,163266..163384,163467..163571,163650..163909,164043..164196,164271..164327,164418..164491,164570..164697,164775..164839)
location: region:161333-164839:1
so has part: feature:161333-161412:1:exon
so has part: feature:161644-161697:1:exon
so has part: feature:161786-161864:1:exon
so has part: feature:161938-162059:1:exon
so has part: feature:162192-162267:1:exon
so has part: feature:162351-162467:1:exon
so has part: feature:162535-162670:1:exon
so has part: feature:162744-162835:1:exon
so has part: feature:163057-163186:1:exon
so has part: feature:163266-163384:1:exon
so has part: feature:163467-163571:1:exon
so has part: feature:163650-163909:1:exon
so has part: feature:164043-164196:1:exon
so has part: feature:164271-164327:1:exon
so has part: feature:164418-164491:1:exon
so has part: feature:164570-164697:1:exon
so has part: feature:164775-164839:1:exon

XP_031412253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161333-161412:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161644-161697:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:161786-161864:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:161938-162059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162192-162267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:162351-162467:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:162535-162670:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:162744-162835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163057-163186:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:163266-163384:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:163467-163571:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:163650-163909:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:164043-164196:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:164271-164327:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:164418-164491:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:164570-164697:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:164775-164839:1:exon

VTN
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: VTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(164920..169220)
location: region:164920-169220:-1
so has part: feature:164920-169220:-1:exon
subclass of: SO_0000010

100540405
type: Gene
SIO_000068: ncbigene

position:164920:-1
position: 164920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:169220:-1
position: 169220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164920-169220:-1:exon

VTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: VTN
product: vitronectin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 145 samples with support for all annotated introns
transcript id: XM_003211755.4
SIO_010081: VTN
subclass of: SO_0000673
so part of: VTN
location: complement(join(164920..165124,165220..165492,165873..166022,166133..166289,166501..166640,166734..167075,167504..167623,167823..167963,169060..169220))
location: region:164920-169220:-1
so has part: feature:169060-169220:-1:exon
so has part: feature:167823-167963:-1:exon
so has part: feature:167504-167623:-1:exon
so has part: feature:166734-167075:-1:exon
so has part: feature:166501-166640:-1:exon
so has part: feature:166133-166289:-1:exon
so has part: feature:165873-166022:-1:exon
so has part: feature:165220-165492:-1:exon
so has part: feature:164920-165124:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169060-169220:-1:exon

position:169060:-1
position: 169060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:167823-167963:-1:exon

position:167823:-1
position: 167823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167963:-1
position: 167963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:167504-167623:-1:exon

position:167504:-1
position: 167504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167623:-1
position: 167623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:166734-167075:-1:exon

position:166734:-1
position: 166734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167075:-1
position: 167075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:166501-166640:-1:exon

position:166501:-1
position: 166501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166640:-1
position: 166640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:166133-166289:-1:exon

position:166133:-1
position: 166133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166289:-1
position: 166289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:165873-166022:-1:exon

position:165873:-1
position: 165873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166022:-1
position: 166022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:165220-165492:-1:exon

position:165220:-1
position: 165220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165492:-1
position: 165492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:164920-165124:-1:exon

position:165124:-1
position: 165124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VTN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: VTN
product: vitronectin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 162 samples with support for all annotated introns
transcript id: XM_031556394.1
SIO_010081: VTN
subclass of: SO_0000673
so part of: VTN
location: complement(join(164920..165124,165220..165492,165873..166022,166133..166289,166501..166640,166734..167075,167504..167623,167823..167971))
location: region:164920-167971:-1
so has part: feature:167823-167971:-1:exon
so has part: feature:167504-167623:-1:exon
so has part: feature:166734-167075:-1:exon
so has part: feature:166501-166640:-1:exon
so has part: feature:166133-166289:-1:exon
so has part: feature:165873-166022:-1:exon
so has part: feature:165220-165492:-1:exon
so has part: feature:164920-165124:-1:exon

position:167971:-1
position: 167971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167823-167971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167504-167623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166734-167075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166501-166640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166133-166289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165873-166022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165220-165492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:164920-165124:-1:exon

VTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: VTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitronectin
translation: MRLLLLVLVLALLAPTRAAEDSCEGRCDEGFNALKKCQCDNLCNYYQSCCSDYSTVCKAKVTRGDVFALPEDDYLDYDLPIDTGTEGPTGAPAPTEHPTEPHTFPLPTRETDTATEETPVETEVPTLHPTTTTTTTTSEGTRNPSLEDEPEKLCSRKPFNAFTDLKNGSLYAFRGKYFYELDESSVRPGYPKLISDVWGIEGPIDAAFTRINCQGKTYLFKGNKYWRFDDGALEPGYPRDISEGFEGIPNDIDAAFALPAHSYHGNERVYFFKGKYYWSYDFAHQPTQAECDKSSPSTVFNHYAFMNRDSWEDIFFSLFGSRMVGASSPRLISRDWRGVPNQLDAAMAGRIYVSSRQPRRRNSRRHRKRYRNHRTLNLGFWGWLNNDSESTDTESDWLSGSQCETLQSVYFFVGDKYYRVNLRTKRVDLVQPRYPRSIAQYWLDCPQPDEEST
SIO_010081: VTN
subclass of: SO_0000673
so part of: VTN
location: complement(join(165006..165124,165220..165492,165873..166022,166133..166289,166501..166640,166734..167075,167504..167623,167823..167883))
location: region:165006-167883:-1
so has part: feature:167823-167883:-1:exon
so has part: feature:167504-167623:-1:exon
so has part: feature:166734-167075:-1:exon
so has part: feature:166501-166640:-1:exon
so has part: feature:166133-166289:-1:exon
so has part: feature:165873-166022:-1:exon
so has part: feature:165220-165492:-1:exon
so has part: feature:165006-165124:-1:exon

XP_031412254.1
type: Protein
SIO_000068: ncbiprotein

position:165006:-1
position: 165006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:167883:-1
position: 167883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:167823-167883:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167504-167623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166734-167075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166501-166640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166133-166289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165873-166022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165220-165492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165006-165124:-1:exon

VTN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: VTN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitronectin
translation: MRLLLLVLVLALLAPTRAAEDSCEGRCDEGFNALKKCQCDNLCNYYQSCCSDYSTVCKAKVTRGDVFALPEDDYLDYDLPIDTGTEGPTGAPAPTEHPTEPHTFPLPTRETDTATEETPVETEVPTLHPTTTTTTTTSEGTRNPSLEDEPEKLCSRKPFNAFTDLKNGSLYAFRGKYFYELDESSVRPGYPKLISDVWGIEGPIDAAFTRINCQGKTYLFKGNKYWRFDDGALEPGYPRDISEGFEGIPNDIDAAFALPAHSYHGNERVYFFKGKYYWSYDFAHQPTQAECDKSSPSTVFNHYAFMNRDSWEDIFFSLFGSRMVGASSPRLISRDWRGVPNQLDAAMAGRIYVSSRQPRRRNSRRHRKRYRNHRTLNLGFWGWLNNDSESTDTESDWLSGSQCETLQSVYFFVGDKYYRVNLRTKRVDLVQPRYPRSIAQYWLDCPQPDEEST
SIO_010081: VTN
subclass of: SO_0000673
so part of: VTN
location: complement(join(165006..165124,165220..165492,165873..166022,166133..166289,166501..166640,166734..167075,167504..167623,167823..167883))
location: region:165006-167883:-1
so has part: feature:167823-167883:-1:exon
so has part: feature:167504-167623:-1:exon
so has part: feature:166734-167075:-1:exon
so has part: feature:166501-166640:-1:exon
so has part: feature:166133-166289:-1:exon
so has part: feature:165873-166022:-1:exon
so has part: feature:165220-165492:-1:exon
so has part: feature:165006-165124:-1:exon

XP_003211803.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:167823-167883:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:167504-167623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:166734-167075:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:166501-166640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:166133-166289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:165873-166022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:165220-165492:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:165006-165124:-1:exon

SARM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SARM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 169564..176130
location: region:169564-176130:1
so has part: feature:169564-176130:1:exon
subclass of: SO_0000010

100540560
type: Gene
SIO_000068: ncbigene

position:169564:1
position: 169564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176130:1
position: 176130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169564-176130:1:exon

SARM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SARM1
product: sterile alpha and TIR motif containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_003211756.4
SIO_010081: SARM1
subclass of: SO_0000673
so part of: SARM1
location: join(169564..170175,172150..172768,172957..173169,173257..173348,173625..173860,173943..174036,174280..174469,174563..174684,174925..176130)
location: region:169564-176130:1
so has part: feature:169564-170175:1:exon
so has part: feature:172150-172768:1:exon
so has part: feature:172957-173169:1:exon
so has part: feature:173257-173348:1:exon
so has part: feature:173625-173860:1:exon
so has part: feature:173943-174036:1:exon
so has part: feature:174280-174469:1:exon
so has part: feature:174563-174684:1:exon
so has part: feature:174925-176130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:169564-170175:1:exon

position:170175:1
position: 170175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172150-172768:1:exon

position:172150:1
position: 172150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:172768:1
position: 172768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:172957-173169:1:exon

position:172957:1
position: 172957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173169:1
position: 173169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:173257-173348:1:exon

position:173257:1
position: 173257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173348:1
position: 173348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:173625-173860:1:exon

position:173625:1
position: 173625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173860:1
position: 173860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:173943-174036:1:exon

position:173943:1
position: 173943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174036:1
position: 174036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:174280-174469:1:exon

position:174280:1
position: 174280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174469:1
position: 174469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:174563-174684:1:exon

position:174563:1
position: 174563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174684:1
position: 174684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:174925-176130:1:exon

position:174925:1
position: 174925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SARM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SARM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sterile alpha and TIR motif-containing protein 1
translation: MSMVLTLLVSVHRLCRLFAMSGAERLAVPECVSQAGCWAAGGSRERREVSPGVNSDVRAALERILPALQRSIACAKQAAGPAEMGKAIAEIFQLVEEAWGMPTLGRDVAKALCDAIRLEGGLDLLLNLLYTAELETKCQAGQLLEQILVAENRDRIARIGLGVILNLAKERDVLQLAQSVSGILEHMFKHTEETCSQLISDGGLDAILYWCRWTDPVVLRHCAMALANCAMYGGQGNQRLMIKKKAAEWLFPLVFSRDDEFIRLHACLAIAVLATNKEIEKEVERSGTLALVEPFIASLDPEQFACDMLGSSDNSQGRTAEDLQRLVPLLDSSRLEAQCIAAFYLCTEAAIKARQKKTQVFSEIGATQSLKRVVCYSTSSTTSSLAKKVLRLIGEEVPRRILPTVPNWKPCEVQTWLQQIGFTKFCPNFLERQVDGDILLRLTEEELQEDLGMGSSITRKRFFRELTELKTFANYSTCDRSNLADWLGSIDPMFRQYTYNLLTCGINRNLLHRVTEQQLQEDCHISTGFHRIRILSAARETLHSPITLQTASNGTDVFISYRRSSGSQLASLLKVHLQLHGFSVFIDVEKLEAGKFEDKLTQSVLSARNFVLVLSPHALDKCMADPECKDWVHKEIVTALNSGKNIVPVTDHFEWPDPETLPKDMRAVLKFNGIKWSHEYQEATIDKIIRFLQGRSSRDSSAGSDNGLDCSPPIGPT
SIO_010081: SARM1
subclass of: SO_0000673
so part of: SARM1
location: join(169718..170175,172150..172768,172957..173169,173257..173348,173625..173860,173943..174036,174280..174469,174563..174684,174925..175054)
location: region:169718-175054:1
so has part: feature:169718-170175:1:exon
so has part: feature:172150-172768:1:exon
so has part: feature:172957-173169:1:exon
so has part: feature:173257-173348:1:exon
so has part: feature:173625-173860:1:exon
so has part: feature:173943-174036:1:exon
so has part: feature:174280-174469:1:exon
so has part: feature:174563-174684:1:exon
so has part: feature:174925-175054:1:exon

XP_003211804.2
type: Protein
SIO_000068: ncbiprotein

position:169718:1
position: 169718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175054:1
position: 175054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:169718-170175:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:172150-172768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:172957-173169:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:173257-173348:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:173625-173860:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:173943-174036:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:174280-174469:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:174563-174684:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:174925-175054:1:exon

SLC46A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC46A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(178608..>181835)
location: region:178608-181835:-1
so has part: feature:178608-181835:-1:exon
subclass of: SO_0000010

100543022
type: Gene
SIO_000068: ncbigene

position:178608:-1
position: 178608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181835:-1
position: 181835
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178608-181835:-1:exon

SLC46A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC46A1
product: solute carrier family 46 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 204 samples with support for all annotated introns
transcript id: XM_010721877.3
SIO_010081: SLC46A1
subclass of: SO_0000673
so part of: SLC46A1
location: complement(join(178608..178910,179568..179724,180580..180663,180944..>181835))
location: region:178608-181835:-1
so has part: feature:180944-181835:-1:exon
so has part: feature:180580-180663:-1:exon
so has part: feature:179568-179724:-1:exon
so has part: feature:178608-178910:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:180944-181835:-1:exon

position:180944:-1
position: 180944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:180580-180663:-1:exon

position:180580:-1
position: 180580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180663:-1
position: 180663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:179568-179724:-1:exon

position:179568:-1
position: 179568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179724:-1
position: 179724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:178608-178910:-1:exon

position:178910:-1
position: 178910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC46A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC46A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proton-coupled folate transporter
translation: AVPTPHRCAFFFQEVEALVAHWNLYINLGGFFVGLFSVTLFGPWSDSAGRRPVLVLPAVGMAMQAAVYLLVMYLRLHVAFLLLGRIVSGLLGDYNLILAGCFASVADSSDRRARTFRVAVLEACLGVAGMVASLGGGRWRKAEGYINPFWLVLAAGLAAALYAALCLQETVKQRRAAKLLTLQHYKAVYKLYTAPENLSSRRKLALYSLAFFLLVTVHFGTKDLYVLYELGSPLCWASDLIGYGSAASYLAYLSSLGGLRLLQLCLEDTWVAEIGLISNIAGLVVISLATTTPLMFTGYGIMFLSMAATPVIRAKLSKLVSETEQGALFASVACVEGLCSLVATGVFNSLYPSTLHFMRGFPFLFGAIVLLIPAAIMGWIEIQDSNLQYSHFSDASSSPADG
SIO_010081: SLC46A1
subclass of: SO_0000673
so part of: SLC46A1
location: complement(join(178835..178910,179568..179724,180580..180663,180944..>181835))
location: region:178835-181835:-1
so has part: feature:180944-181835:-1:exon
so has part: feature:180580-180663:-1:exon
so has part: feature:179568-179724:-1:exon
so has part: feature:178835-178910:-1:exon

XP_010720179.1
type: Protein
SIO_000068: ncbiprotein

position:178835:-1
position: 178835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180944-181835:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:180580-180663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:179568-179724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:178835-178910:-1:exon

SRR
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 181944..184320
location: region:181944-184320:1
so has part: feature:181944-184320:1:exon
subclass of: SO_0000010

100542246
type: Gene
SIO_000068: ncbigene

position:181944:1
position: 181944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:184320:1
position: 184320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181944-184320:1:exon

SRR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SRR
product: serine racemase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 199 samples with support for all annotated introns
transcript id: XM_010721718.2
SIO_010081: SRR
subclass of: SO_0000673
so part of: SRR
location: join(181944..182072,182144..182279,182494..182597,182682..182801,182867..182941,183131..183340,183615..184320)
location: region:181944-184320:1
so has part: feature:181944-182072:1:exon
so has part: feature:182144-182279:1:exon
so has part: feature:182494-182597:1:exon
so has part: feature:182682-182801:1:exon
so has part: feature:182867-182941:1:exon
so has part: feature:183131-183340:1:exon
so has part: feature:183615-184320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181944-182072:1:exon

position:182072:1
position: 182072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:182144-182279:1:exon

position:182144:1
position: 182144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182279:1
position: 182279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182494-182597:1:exon

position:182494:1
position: 182494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182597:1
position: 182597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:182682-182801:1:exon

position:182682:1
position: 182682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182801:1
position: 182801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:182867-182941:1:exon

position:182867:1
position: 182867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182941:1
position: 182941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:183131-183340:1:exon

position:183131:1
position: 183131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183340:1
position: 183340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:183615-184320:1:exon

position:183615:1
position: 183615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SRR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine racemase isoform X1
translation: MGRLRGRVRRTPVLTCESLQRLAGRRLLFKCELFQRTGSFKIRGALNAVRSLVEEAEKAGRERPRAVVTHSSGNHGQALACAARDEGIPAYIVVPRTAPRCKQAAIRAYGATLVPCESSDESRAETAARVVQETGGVMVHPNQEPAVIAGQGTIALEVLEQAPEVNALVVPVGGGGMIAGIAVAIKALRPDVKVFAAEPRNADDCYQSKLRGELTPNRHTPVTIADAVKTSIGENTWPIIRDLVDDVLTVSEEEIKRATRLVWERMKLLIEPTAGVGVAAVLSEQFQAVPREVENVCIVLCGGNVDLSSLTWLTDLPGDGD
SIO_010081: SRR
subclass of: SO_0000673
so part of: SRR
location: join(181950..182072,182144..182279,182494..182597,182682..182801,182867..182941,183131..183340,183615..183812)
location: region:181950-183812:1
so has part: feature:181950-182072:1:exon
so has part: feature:182144-182279:1:exon
so has part: feature:182494-182597:1:exon
so has part: feature:182682-182801:1:exon
so has part: feature:182867-182941:1:exon
so has part: feature:183131-183340:1:exon
so has part: feature:183615-183812:1:exon

XP_010720020.1
type: Protein
SIO_000068: ncbiprotein

position:181950:1
position: 181950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183812:1
position: 183812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:181950-182072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182144-182279:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:182494-182597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182682-182801:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:182867-182941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183131-183340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:183615-183812:1:exon

SRR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SRR
product: serine racemase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_019621881.2
SIO_010081: SRR
subclass of: SO_0000673
so part of: SRR
location: join(182190..182279,182384..182597,182682..182801,182867..182941,183131..183340,183615..184320)
location: region:182190-184320:1
so has part: feature:182190-182279:1:exon
so has part: feature:182384-182597:1:exon
so has part: feature:182682-182801:1:exon
so has part: feature:182867-182941:1:exon
so has part: feature:183131-183340:1:exon
so has part: feature:183615-184320:1:exon

position:182190:1
position: 182190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182190-182279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182384-182597:1:exon

position:182384:1
position: 182384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:182682-182801:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:182867-182941:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:183131-183340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:183615-184320:1:exon

SRR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SRR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine racemase isoform X2
translation: MVHPNQEPAVIAGQGTIALEVLEQAPEVNALVVPVGGGGMIAGIAVAIKALRPDVKVFAAEPRNADDCYQSKLRGELTPNRHTPVTIADAVKTSIGENTWPIIRDLVDDVLTVSEEEIKRATRLVWERMKLLIEPTAGVGVAAVLSEQFQAVPREVENVCIVLCGGNVDLSSLTWLTDLPGDGD
SIO_010081: SRR
subclass of: SO_0000673
so part of: SRR
location: join(182730..182801,182867..182941,183131..183340,183615..183812)
location: region:182730-183812:1
so has part: feature:182730-182801:1:exon
so has part: feature:182867-182941:1:exon
so has part: feature:183131-183340:1:exon
so has part: feature:183615-183812:1:exon

XP_019477426.1
type: Protein
SIO_000068: ncbiprotein

position:182730:1
position: 182730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:182730-182801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:182867-182941:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:183131-183340:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183615-183812:1:exon

TSR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TSR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(184270..190402)
location: region:184270-190402:-1
so has part: feature:184270-190402:-1:exon
subclass of: SO_0000010

100542398
type: Gene
SIO_000068: ncbigene

position:184270:-1
position: 184270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190402:-1
position: 190402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:184270-190402:-1:exon

TSR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TSR1
product: TSR1 ribosome maturation factor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_010721717.3
SIO_010081: TSR1
subclass of: SO_0000673
so part of: TSR1
location: complement(join(184270..184633,184725..184799,184911..185051,185341..185457,185866..185998,186351..186461,186567..186729,187032..187234,187520..187680,188028..188187,188503..188929,189442..189576,189654..189870,190062..190165,190245..190402))
location: region:184270-190402:-1
so has part: feature:190245-190402:-1:exon
so has part: feature:190062-190165:-1:exon
so has part: feature:189654-189870:-1:exon
so has part: feature:189442-189576:-1:exon
so has part: feature:188503-188929:-1:exon
so has part: feature:188028-188187:-1:exon
so has part: feature:187520-187680:-1:exon
so has part: feature:187032-187234:-1:exon
so has part: feature:186567-186729:-1:exon
so has part: feature:186351-186461:-1:exon
so has part: feature:185866-185998:-1:exon
so has part: feature:185341-185457:-1:exon
so has part: feature:184911-185051:-1:exon
so has part: feature:184725-184799:-1:exon
so has part: feature:184270-184633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:190245-190402:-1:exon

position:190245:-1
position: 190245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:190062-190165:-1:exon

position:190062:-1
position: 190062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190165:-1
position: 190165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189654-189870:-1:exon

position:189654:-1
position: 189654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189870:-1
position: 189870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:189442-189576:-1:exon

position:189442:-1
position: 189442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189576:-1
position: 189576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:188503-188929:-1:exon

position:188503:-1
position: 188503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188929:-1
position: 188929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:188028-188187:-1:exon

position:188028:-1
position: 188028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188187:-1
position: 188187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:187520-187680:-1:exon

position:187520:-1
position: 187520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187680:-1
position: 187680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:187032-187234:-1:exon

position:187032:-1
position: 187032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:187234:-1
position: 187234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:186567-186729:-1:exon

position:186567:-1
position: 186567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186729:-1
position: 186729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:186351-186461:-1:exon

position:186351:-1
position: 186351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186461:-1
position: 186461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:185866-185998:-1:exon

position:185866:-1
position: 185866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185998:-1
position: 185998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:185341-185457:-1:exon

position:185341:-1
position: 185341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185457:-1
position: 185457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:184911-185051:-1:exon

position:184911:-1
position: 184911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185051:-1
position: 185051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:184725-184799:-1:exon

position:184725:-1
position: 184725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184799:-1
position: 184799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:184270-184633:-1:exon

position:184633:-1
position: 184633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TSR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TSR1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog
translation: MVASGAHRPGPLKQQNKAHKGGKHRRTAQRRAGGRVSVKALPHRRLRDLNRVDRRHQALQLRRQRKEAVLAEKRSLGSRDGPPHLVVVVPLHAKAAAHDALRLLQSQDSVVVHVDEGKTGSFAILCPRLKQRWRFVTAQAGDLHAIMDLAKVADSLLFVLDPVDGWDSTGEHCLSCLFAQGLPSYVLAVPGGTDVPPKKRIDAKKKLTKAIEKWFPEVKLFPLNTEQESSVLLRHLATQKQRHLAFRDRRAHLLAYAAEFVPSQESDQVGTLKVSGFVRGQTLNVNSLVHIVGHGDFQMSQLDAPPXPLSLNPRVVKGQKRSQDMEVQEDSANGTDEMEEDVKILMKADTSKQESLQSEVVPDPMEGEQTWPSEEELQEAEASQKENKRVVKVPKGTSKYQAAWIVDDGEEGSEEEEDDEDDDFGDDMMEEAVSQEGESSGEEEELAEEECETMTVSECMRDDQYDEKVEEDEQMLEKYKQERMDEMFPDEVDTPRDVPARVRFQKYRGLKSFRTSPWDPKENLPRDYARIYQFQDFSRTRKHLFRQIEKEETEGASVGWYVTLHVCNVPVSVMESFKEGRPLVLFSLLPHEQKMSVLNFLVRRHPSNSDPVRAKEELIFHCGFRRFRASPLFSQHTSADKHKLERFLRPDTALVVTVYAPITFPPASVLVFKQRSNGMHDLIATGSLLAVDPDRIIIKRLVLSGHPFKIFTKAAVVRYMFFNREDVMWFKPVELRTKWGRRGHIKEPLGTHGHMKCHFDGQLKSQDTVLLNLYKRVYPKWTYDPYVPEPVPWVRSESALPGQEVEME
SIO_010081: TSR1
subclass of: SO_0000673
so part of: TSR1
location: complement(join(184455..184633,184725..184799,184911..185051,185341..185457,185866..185998,186351..186461,186567..186729,187032..187234,187520..187680,188028..188187,188503..188929,189442..189576,189654..189870,190062..190165,190245..190344))
location: region:184455-190344:-1
so has part: feature:190245-190344:-1:exon
so has part: feature:190062-190165:-1:exon
so has part: feature:189654-189870:-1:exon
so has part: feature:189442-189576:-1:exon
so has part: feature:188503-188929:-1:exon
so has part: feature:188028-188187:-1:exon
so has part: feature:187520-187680:-1:exon
so has part: feature:187032-187234:-1:exon
so has part: feature:186567-186729:-1:exon
so has part: feature:186351-186461:-1:exon
so has part: feature:185866-185998:-1:exon
so has part: feature:185341-185457:-1:exon
so has part: feature:184911-185051:-1:exon
so has part: feature:184725-184799:-1:exon
so has part: feature:184455-184633:-1:exon

XP_010720019.1
type: Protein
SIO_000068: ncbiprotein

position:184455:-1
position: 184455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190344:-1
position: 190344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190245-190344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:190062-190165:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189654-189870:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:189442-189576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:188503-188929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:188028-188187:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:187520-187680:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:187032-187234:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:186567-186729:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:186351-186461:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:185866-185998:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:185341-185457:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:184911-185051:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:184725-184799:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:184455-184633:-1:exon

LOC116217369
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217369
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(185723..185815)
location: region:185723-185815:-1
so has part: feature:185723-185815:-1:exon
subclass of: SO_0000578

116217369
type: Gene
SIO_000068: ncbigene

position:185723:-1
position: 185723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185815:-1
position: 185815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185723-185815:-1:exon

LOC116217369
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217369
product: small nucleolar RNA SNORD91 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00580
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161826.1
SIO_010081: LOC116217369
subclass of: SO_0000673
so part of: LOC116217369
location: complement(185723..185815)
location: region:185723-185815:-1
so has part: feature:185723-185815:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185723-185815:-1:exon

LOC116217370
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217370
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(186870..186962)
location: region:186870-186962:-1
so has part: feature:186870-186962:-1:exon
subclass of: SO_0000578

116217370
type: Gene
SIO_000068: ncbigene

position:186870:-1
position: 186870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186962:-1
position: 186962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186870-186962:-1:exon

LOC116217370
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217370
product: small nucleolar RNA SNORD91 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00580
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161827.1
SIO_010081: LOC116217370
subclass of: SO_0000673
so part of: LOC116217370
location: complement(186870..186962)
location: region:186870-186962:-1
so has part: feature:186870-186962:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186870-186962:-1:exon

POLDIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: POLDIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(190541..199616)
location: region:190541-199616:-1
so has part: feature:190541-199616:-1:exon
subclass of: SO_0000010

100540248
type: Gene
SIO_000068: ncbigene

position:190541:-1
position: 190541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199616:-1
position: 199616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:190541-199616:-1:exon

POLDIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: POLDIP2
product: DNA polymerase delta interacting protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_010721879.2
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(190541..192869,194295..194374,194796..194921,195107..195133,196138..196274,196451..196558,197155..197230,197647..197743,198141..198238,198858..198939,199612..199616))
location: region:190541-199616:-1
so has part: feature:199612-199616:-1:exon
so has part: feature:198858-198939:-1:exon
so has part: feature:198141-198238:-1:exon
so has part: feature:197647-197743:-1:exon
so has part: feature:197155-197230:-1:exon
so has part: feature:196451-196558:-1:exon
so has part: feature:196138-196274:-1:exon
so has part: feature:195107-195133:-1:exon
so has part: feature:194796-194921:-1:exon
so has part: feature:194295-194374:-1:exon
so has part: feature:190541-192869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:199612-199616:-1:exon

position:199612:-1
position: 199612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:198858-198939:-1:exon

position:198858:-1
position: 198858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198939:-1
position: 198939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:198141-198238:-1:exon

position:198141:-1
position: 198141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198238:-1
position: 198238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:197647-197743:-1:exon

position:197647:-1
position: 197647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197743:-1
position: 197743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197155-197230:-1:exon

position:197155:-1
position: 197155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197230:-1
position: 197230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196451-196558:-1:exon

position:196451:-1
position: 196451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196558:-1
position: 196558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:196138-196274:-1:exon

position:196138:-1
position: 196138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196274:-1
position: 196274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:195107-195133:-1:exon

position:195107:-1
position: 195107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195133:-1
position: 195133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:194796-194921:-1:exon

position:194796:-1
position: 194796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194921:-1
position: 194921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:194295-194374:-1:exon

position:194295:-1
position: 194295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194374:-1
position: 194374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:190541-192869:-1:exon

position:192869:-1
position: 192869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLDIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: POLDIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polymerase delta-interacting protein 2
translation: MYDQTKVPPFVARDTLCAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSEVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPDGSHFDVRIPPFSLESNKDEKTPPSGLHW
SIO_010081: POLDIP2
subclass of: SO_0000673
so part of: POLDIP2
location: complement(join(192755..192869,194295..194374,194796..194921,195107..195133,196138..196274,196451..196469))
location: region:192755-196469:-1
so has part: feature:196451-196469:-1:exon
so has part: feature:196138-196274:-1:exon
so has part: feature:195107-195133:-1:exon
so has part: feature:194796-194921:-1:exon
so has part: feature:194295-194374:-1:exon
so has part: feature:192755-192869:-1:exon

XP_010720181.2
type: Protein
SIO_000068: ncbiprotein

position:192755:-1
position: 192755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196469:-1
position: 196469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:196451-196469:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196138-196274:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195107-195133:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:194796-194921:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194295-194374:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:192755-192869:-1:exon

LOC100541939
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100541939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(199755..277478)
location: region:199755-277478:-1
so has part: feature:199755-277478:-1:exon
subclass of: SO_0000010

100541939
type: Gene
SIO_000068: ncbigene

position:199755:-1
position: 199755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277478:-1
position: 277478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199755-277478:-1:exon

LOC100541939
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100541939
product: SMG6 nonsense mediated mRNA decay factor
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031556395.1
SIO_010081: LOC100541939
subclass of: SO_0000673
so part of: LOC100541939
location: complement(join(199755..200905,202803..202979,224591..224792,231986..232154,232624..232740,251268..251412,254423..254484,268268..268480,269141..269251,270487..270565,271678..271784,272524..272634,273319..273511,274983..276747,277460..277478))
location: region:199755-277478:-1
so has part: feature:277460-277478:-1:exon
so has part: feature:274983-276747:-1:exon
so has part: feature:273319-273511:-1:exon
so has part: feature:272524-272634:-1:exon
so has part: feature:271678-271784:-1:exon
so has part: feature:270487-270565:-1:exon
so has part: feature:269141-269251:-1:exon
so has part: feature:268268-268480:-1:exon
so has part: feature:254423-254484:-1:exon
so has part: feature:251268-251412:-1:exon
so has part: feature:232624-232740:-1:exon
so has part: feature:231986-232154:-1:exon
so has part: feature:224591-224792:-1:exon
so has part: feature:202803-202979:-1:exon
so has part: feature:199755-200905:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:277460-277478:-1:exon

position:277460:-1
position: 277460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274983-276747:-1:exon

position:274983:-1
position: 274983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276747:-1
position: 276747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:273319-273511:-1:exon

position:273319:-1
position: 273319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273511:-1
position: 273511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:272524-272634:-1:exon

position:272524:-1
position: 272524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272634:-1
position: 272634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:271678-271784:-1:exon

position:271678:-1
position: 271678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271784:-1
position: 271784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:270487-270565:-1:exon

position:270487:-1
position: 270487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:270565:-1
position: 270565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:269141-269251:-1:exon

position:269141:-1
position: 269141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269251:-1
position: 269251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:268268-268480:-1:exon

position:268268:-1
position: 268268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:268480:-1
position: 268480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:254423-254484:-1:exon

position:254423:-1
position: 254423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254484:-1
position: 254484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:251268-251412:-1:exon

position:251268:-1
position: 251268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251412:-1
position: 251412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:232624-232740:-1:exon

position:232624:-1
position: 232624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232740:-1
position: 232740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:231986-232154:-1:exon

position:231986:-1
position: 231986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232154:-1
position: 232154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:224591-224792:-1:exon

position:224591:-1
position: 224591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:224792:-1
position: 224792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:202803-202979:-1:exon

position:202803:-1
position: 202803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202979:-1
position: 202979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:199755-200905:-1:exon

position:200905:-1
position: 200905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100541939
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100541939
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: telomerase-binding protein EST1A
translation: MKEVKEPRHRKDNRRPDLEIYKPGLSRLRSKLVPPKHEASEERSGAEEGKGENGPSGGGSFRRRASSHGELQHGDSHNQNGPSLGNEETETKGDLQSQENSCTPLAVDESGAKTTRRIKKPDQQIYQPGKRLHLVAKEVALRLATEEITSKVEQLRVEGGEETEKGTAEDNNRKTKSIKEDREGNQAGDGVKSSRADKGRRLERTDRVRRAHDEVMQGKLGATKRYSRSDKRRSRYRTCSTSSAGSNNSVDGAPLVDGMERRQERARIRPRKQLSASSTDSLDDDRIDEAEAYVSNRISDRKKRLEQSRTSRSESERSSNSREAKGHFRVTFDSKTMNRDVILADADKKKPLKAFSGCNDSETLDARSQSREPQGRGRGILFLPANTDLSASSAASPEPSHPGPRLLLGGAGSKGSRSRGRGGTARRLWDPNNPDQKPALKSQTPQLHFLDTDDEVSPTSWGEARQAQTSYYKFQNSDNPYYYPRAAGQGPQYPYGGYSLQYPMGPSNGVYPGAFYPGYPGQAGQYMCGPLTPAPLSPEMEQQMRNMQQQELSKLLREAGNQEQQLSNLLSRDRISPEGLEKMAQLRVEMLQLYERCILTDIEFSDTQNVDQLLWKNAFYQVIEKFRQLLKDPLGENAQEIRNKLLQLLDEGTSFFDGLLQKLQVSYQFKLEDYMDGMAIRCKPLRKMVKYALISAQRCMICQGDICRYREQANDTANYGKARSWYLKAQQIAPKNGRPYNQLALLAIYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEQKKHQVLELSPSHRGKGKKSTLRQVGDDATRLEIWIHPSHPRSSQGHESGRDSEQDNGLGNLSPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEEVLREFQVLLQHXPPPIGSTRMLQLVAINMFAVYNSQPKECISEDCRSVIQEQATALGLSMFALLVRRCTNLLRECMQVPPQEEEQEDEEDDIKISALPQDLKELLPSVKVWSDWMLGHPDTWNPPPTSLELPKQVSVDVWATLADFCNILTAVNQSEVPLYKDPDDDLALLSLEEDRLLSGFVPLLVAPQEPCYVERTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDAMGKEMGSQEGKQLEDQKEDDVRIEAFEDDSEAEGSGGEMDIKELRAKKQALARKVAEQQRRQDKIQVGWAHIQLRNCFTFVPGLILSHCAGCTQLCLRFLGMSLSPTAKPSCTFRAQSQTALLNHPGVSSALPVPGLSMLGLQEPTRSCTALLMELLALPAVLTELLLVAAVQRVPGSRLSRAGTAARWPQGSVRRRLSHAAGHGQTGERVGRERQSSCGSQQREKQPADGCRGQSAACEALPSLWGQTDGIQVMLCWPWPNLSTSPSGSL
SIO_010081: LOC100541939
subclass of: SO_0000673
so part of: LOC100541939
location: complement(join(200138..200905,202803..202979,224591..224792,231986..232154,232624..232740,251268..251412,254423..254484,268268..268480,269141..269251,270487..270565,271678..271784,272524..272634,273319..273511,274983..276742))
location: region:200138-276742:-1
so has part: feature:274983-276742:-1:exon
so has part: feature:273319-273511:-1:exon
so has part: feature:272524-272634:-1:exon
so has part: feature:271678-271784:-1:exon
so has part: feature:270487-270565:-1:exon
so has part: feature:269141-269251:-1:exon
so has part: feature:268268-268480:-1:exon
so has part: feature:254423-254484:-1:exon
so has part: feature:251268-251412:-1:exon
so has part: feature:232624-232740:-1:exon
so has part: feature:231986-232154:-1:exon
so has part: feature:224591-224792:-1:exon
so has part: feature:202803-202979:-1:exon
so has part: feature:200138-200905:-1:exon

XP_031412255.1
type: Protein
SIO_000068: ncbiprotein

position:200138:-1
position: 200138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276742:-1
position: 276742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274983-276742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:273319-273511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:272524-272634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:271678-271784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:270487-270565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:269141-269251:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:268268-268480:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:254423-254484:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:251268-251412:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:232624-232740:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:231986-232154:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:224591-224792:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:202803-202979:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:200138-200905:-1:exon

LOC109370612
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370612
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 225353..225942
location: region:225353-225942:1
so has part: feature:225353-225942:1:exon
subclass of: SO_0000011

109370612
type: Gene
SIO_000068: ncbigene

position:225353:1
position: 225353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225942:1
position: 225942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225353-225942:1:exon

LOC109370612
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370612
product: uncharacterized LOC109370612
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002120885.2
SIO_010081: LOC109370612
subclass of: SO_0000673
so part of: LOC109370612
location: join(225353..225602,225684..225942)
location: region:225353-225942:1
so has part: feature:225353-225602:1:exon
so has part: feature:225684-225942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225353-225602:1:exon

position:225602:1
position: 225602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:225684-225942:1:exon

position:225684:1
position: 225684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913882
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(279180..>286404)
location: region:279180-286404:-1
so has part: feature:279180-286404:-1:exon
subclass of: SO_0000010

104913882
type: Gene
SIO_000068: ncbigene

position:279180:-1
position: 279180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286404:-1
position: 286404
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279180-286404:-1:exon

LOC104913882
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913882
product: telomerase-binding protein EST1A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_031556481.1
SIO_010081: LOC104913882
subclass of: SO_0000673
so part of: LOC104913882
location: complement(join(279180..281106,282826..282907,283131..283342,286215..>286404))
location: region:279180-286404:-1
so has part: feature:286215-286404:-1:exon
so has part: feature:283131-283342:-1:exon
so has part: feature:282826-282907:-1:exon
so has part: feature:279180-281106:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:286215-286404:-1:exon

position:286215:-1
position: 286215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:283131-283342:-1:exon

position:283131:-1
position: 283131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283342:-1
position: 283342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:282826-282907:-1:exon

position:282826:-1
position: 282826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282907:-1
position: 282907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279180-281106:-1:exon

position:281106:-1
position: 281106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913882
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913882
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase-binding protein EST1A-like
translation: RLSYSSHVLLFQAVLKDQSQMRQMELEIRPVFLVPDTNGFIDHLSSLITLLDCRKFILVVPLIVINELDGLAKGPEMEHRAAVYARQVQERARKSIEFLEERFEGRDNCLRALTSRGNELESISFRSEDTTGQQGNNDDLILSCCLHYCNDKAKDFMPSNKDDPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPTFLKWAQEG
SIO_010081: LOC104913882
subclass of: SO_0000673
so part of: LOC104913882
location: complement(join(280976..281106,282826..282907,283131..283342,286215..>286404))
location: region:280976-286404:-1
so has part: feature:286215-286404:-1:exon
so has part: feature:283131-283342:-1:exon
so has part: feature:282826-282907:-1:exon
so has part: feature:280976-281106:-1:exon

XP_031412341.1
type: Protein
SIO_000068: ncbiprotein

position:280976:-1
position: 280976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:286215-286404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:283131-283342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282826-282907:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280976-281106:-1:exon

LOC116217339
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217339
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 287164..291664
location: region:287164-291664:1
so has part: feature:287164-291664:1:exon
subclass of: SO_0000011

116217339
type: Gene
SIO_000068: ncbigene

position:287164:1
position: 287164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291664:1
position: 291664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287164-291664:1:exon

LOC116217339
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217339
product: uncharacterized LOC116217339
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_004161764.1
SIO_010081: LOC116217339
subclass of: SO_0000673
so part of: LOC116217339
location: join(287164..288412,288908..291664)
location: region:287164-291664:1
so has part: feature:287164-288412:1:exon
so has part: feature:288908-291664:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287164-288412:1:exon

position:288412:1
position: 288412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288908-291664:1:exon

position:288908:1
position: 288908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104909294
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104909294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <291767..292794
location: region:291767-292794:1
so has part: feature:291767-292794:1:exon
subclass of: SO_0000010

104909294
type: Gene
SIO_000068: ncbigene

position:291767:1
position: 291767
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:292794:1
position: 292794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291767-292794:1:exon

LOC104909294
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104909294
product: hypermethylated in cancer 1 protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010721882.1
SIO_010081: LOC104909294
subclass of: SO_0000673
so part of: LOC104909294
location: <291767..292794
location: region:291767-292794:1
so has part: feature:291767-292794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291767-292794:1:exon

LOC104909294
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104909294
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypermethylated in cancer 1 protein
translation: AAPQPRYPSVESNDLEPDNSTSEETGSSEGPSPGDALDRYCNHLGYEPESLGDNLYVCIPCGKGFPSSEQLNAHVEAHNEEELYHKAAAEQAVPFLDKGGAGLGDILRPYRCSSCDKSYKDPATLRQHEKTHWLTRPYPCTICGKKFTQRGTMTRHMRSHLGLKPFACDACGMRFTRQYRLTEHMRIHSGEKPYECQVCGGKFAQQRNLISHMKMHAAGPDGKAKLDFPDSVYAMARLTADQLGLKQEKAAELLSHTSHFLSDPKAMESLYPLAKFTAEHLGLSQDKAAEVLAQAPHLHADAARTIERYSPP
SIO_010081: LOC104909294
subclass of: SO_0000673
so part of: LOC104909294
location: <291767..292705
location: region:291767-292705:1
so has part: feature:291767-292705:1:exon

XP_010720184.1
type: Protein
SIO_000068: ncbiprotein

position:292705:1
position: 292705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291767-292705:1:exon

LOC100541783
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100541783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 293053..297358
location: region:293053-297358:1
so has part: feature:293053-297358:1:exon
subclass of: SO_0000010

100541783
type: Gene
SIO_000068: ncbigene

position:293053:1
position: 293053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297358:1
position: 297358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293053-297358:1:exon

LOC100541783
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100541783
product: hypermethylated in cancer 1 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 82% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010721883.3
SIO_010081: LOC100541783
subclass of: SO_0000673
so part of: LOC100541783
location: join(293053..293685,297247..297358)
location: region:293053-297358:1
so has part: feature:293053-293685:1:exon
so has part: feature:297247-297358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:293053-293685:1:exon

position:293685:1
position: 293685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297247-297358:1:exon

position:297247:1
position: 297247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100541783
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100541783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypermethylated in cancer 1 protein-like
translation: MLEAMEVPSHSRQLLLQLNTQRTKGFLCDVIIVVQNALFRAHKNILAASSAYLKSLVVHDNLLNLDHEMVSPGIFRLILDFIYTGRLGECEPGGEQSLGAVLAAASYLQIPGLVALCKKKLKRSGKYCHLRGGYAPYKLGRGLRAATPVIQACYSGTPRPVDLQPVEPATPLNTQCGELYASASQGTPFPFRWEPATTQNPIAYPATHTHSSPLVSPLRVPHHF
SIO_010081: LOC100541783
subclass of: SO_0000673
so part of: LOC100541783
location: join(293123..293685,297247..297358)
location: region:293123-297358:1
so has part: feature:293123-293685:1:exon
so has part: feature:297247-297358:1:exon

XP_010720185.1
type: Protein
SIO_000068: ncbiprotein

position:293123:1
position: 293123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:293123-293685:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297247-297358:1:exon

LOC109370613
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370613
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(297475..299247)
location: region:297475-299247:-1
so has part: feature:297475-299247:-1:exon
subclass of: SO_0000011

109370613
type: Gene
SIO_000068: ncbigene

position:297475:-1
position: 297475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299247:-1
position: 299247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297475-299247:-1:exon

LOC109370613
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370613
product: uncharacterized LOC109370613
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XR_004161765.1
SIO_010081: LOC109370613
subclass of: SO_0000673
so part of: LOC109370613
location: complement(join(297475..299001,299156..299247))
location: region:297475-299247:-1
so has part: feature:299156-299247:-1:exon
so has part: feature:297475-299001:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299156-299247:-1:exon

position:299156:-1
position: 299156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:297475-299001:-1:exon

position:299001:-1
position: 299001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DPH1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 302466..314602
location: region:302466-314602:1
so has part: feature:302466-314602:1:exon
subclass of: SO_0000010

100541629
type: Gene
SIO_000068: ncbigene

position:302466:1
position: 302466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314602:1
position: 314602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302466-314602:1:exon

DPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DPH1
product: diphthamide biosynthesis 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_010721719.3
SIO_010081: DPH1
subclass of: SO_0000673
so part of: DPH1
location: join(302466..302870,303729..303792,308699..308820,309952..310106,310559..310680,312133..312201,312775..312931,313670..313770,314021..314099,314180..314290,314462..314602)
location: region:302466-314602:1
so has part: feature:302466-302870:1:exon
so has part: feature:303729-303792:1:exon
so has part: feature:308699-308820:1:exon
so has part: feature:309952-310106:1:exon
so has part: feature:310559-310680:1:exon
so has part: feature:312133-312201:1:exon
so has part: feature:312775-312931:1:exon
so has part: feature:313670-313770:1:exon
so has part: feature:314021-314099:1:exon
so has part: feature:314180-314290:1:exon
so has part: feature:314462-314602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:302466-302870:1:exon

position:302870:1
position: 302870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:303729-303792:1:exon

position:303729:1
position: 303729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303792:1
position: 303792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:308699-308820:1:exon

position:308699:1
position: 308699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:308820:1
position: 308820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:309952-310106:1:exon

position:309952:1
position: 309952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310106:1
position: 310106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:310559-310680:1:exon

position:310559:1
position: 310559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310680:1
position: 310680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312133-312201:1:exon

position:312133:1
position: 312133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312201:1
position: 312201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:312775-312931:1:exon

position:312775:1
position: 312775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:312931:1
position: 312931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:313670-313770:1:exon

position:313670:1
position: 313670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313770:1
position: 313770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:314021-314099:1:exon

position:314021:1
position: 314021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314099:1
position: 314099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:314180-314290:1:exon

position:314180:1
position: 314180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314290:1
position: 314290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:314462-314602:1:exon

position:314462:1
position: 314462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1
translation: MPYRLPPLTPTVSPGRAPRRTARQVPEELLNNEELREAVGALPSNYNFEIPKTIWRIRQAGAKKVALQMPEGLLMFACTIADIIERFTDAEAVVMGDVTYGACCVDDYTARALGADFLVHYGHSCLIPIDTTRGLKMLYVFVDIKIDTSHFLDTIRFNFAAGSSLALVSTIQFVAAVQAASQELQSQYKVCVPQCKPLSPGEILGCTSPRLARDTDAIVYLGDGRFHLESIMISNPGIPAYRYDPYSKVFSQEHYAHDRMREARQAAIRSAARAQCWGLLLGTLGRQGSPAILQHLESRLRALGRPFVRVLLSEIFPSKLQLFDSVDAWVQIACPRLSIDWGEAFNKPLLTPYEAAVALGDIEWQQPYPMDFYASQSLGPWTANRSARPAQEKPLTTSSLKNSTEGSRSAHSPEDTTTS
SIO_010081: DPH1
subclass of: SO_0000673
so part of: DPH1
location: join(302678..302870,303729..303792,308699..308820,309952..310106,310559..310680,312133..312201,312775..312931,313670..313770,314021..314099,314180..314290,314462..314548)
location: region:302678-314548:1
so has part: feature:302678-302870:1:exon
so has part: feature:303729-303792:1:exon
so has part: feature:308699-308820:1:exon
so has part: feature:309952-310106:1:exon
so has part: feature:310559-310680:1:exon
so has part: feature:312133-312201:1:exon
so has part: feature:312775-312931:1:exon
so has part: feature:313670-313770:1:exon
so has part: feature:314021-314099:1:exon
so has part: feature:314180-314290:1:exon
so has part: feature:314462-314548:1:exon

XP_010720021.1
type: Protein
SIO_000068: ncbiprotein

position:302678:1
position: 302678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314548:1
position: 314548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:302678-302870:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:303729-303792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:308699-308820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309952-310106:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:310559-310680:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312133-312201:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312775-312931:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313670-313770:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:314021-314099:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:314180-314290:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:314462-314548:1:exon

OVCA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: OVCA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 314639..322293
location: region:314639-322293:1
so has part: feature:314639-322293:1:exon
subclass of: SO_0000010

104913883
type: Gene
SIO_000068: ncbigene

position:314639:1
position: 314639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322293:1
position: 322293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314639-322293:1:exon

OVCA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: OVCA2
product: OVCA2 serine hydrolase domain containing
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556482.1
SIO_010081: OVCA2
subclass of: SO_0000673
so part of: OVCA2
location: join(314639..315371,322216..322293)
location: region:314639-322293:1
so has part: feature:314639-315371:1:exon
so has part: feature:322216-322293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314639-315371:1:exon

position:315371:1
position: 315371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322216-322293:1:exon

position:322216:1
position: 322216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OVCA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: OVCA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: esterase OVCA2
translation: MERGGTEDGPYGLVACWKRVPQPLPPRIPPHCTAPVPRAPRRGRPLHVPAPRPPAARGRAGGWSSPSLSLREAIANQRVAFRREGEGGRKCRSLPAVAGTMSEGRPLRLLALHGYRQSERRFRQRTGALRKALRGRAELVALDAPHLVPGSEDETSDDPPRGWWFSRPGTFEASEAADRPTGLEESLEAVARALEERGPFDGLLGFSQGAALAAMVCALRARGDPRFPVTFAILASGRSTGICNFPFCPAVVTGGPHDPVG
SIO_010081: OVCA2
subclass of: SO_0000673
so part of: OVCA2
location: join(314664..315371,322216..322293)
location: region:314664-322293:1
so has part: feature:314664-315371:1:exon
so has part: feature:322216-322293:1:exon

XP_031412342.1
type: Protein
SIO_000068: ncbiprotein

position:314664:1
position: 314664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314664-315371:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322216-322293:1:exon

RTN4RL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RTN4RL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(321644..>323853)
location: region:321644-323853:-1
so has part: feature:321644-323853:-1:exon
subclass of: SO_0000010

100539938
type: Gene
SIO_000068: ncbigene

position:321644:-1
position: 321644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:323853:-1
position: 323853
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321644-323853:-1:exon

RTN4RL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RTN4RL1
product: reticulon 4 receptor like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031556396.1
SIO_010081: RTN4RL1
subclass of: SO_0000673
so part of: RTN4RL1
location: complement(321644..>323853)
location: region:321644-323853:-1
so has part: feature:321644-323853:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:321644-323853:-1:exon

RTN4RL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RTN4RL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: reticulon-4 receptor-like 1
translation: SWPDTTLPSLQTGALAELLLVLLGLKVPGAASCPTDCVCYPSPMTVSCQAHNFVTIPEGIPEDSERIFLQNNQITLLLRGHFSPSMVTLWIYSNNITFIDPNTFEGFVNLEELDLGDNRYLRALAANTFQGLVKLHALYLYKCGLSSLPSGIFGGLHNLQYLYLQDNHIEFLQDDIFVDLVNLSHLFLHGNKLWSLHQNTFRGLINLDRLLIHQNQLQWIHRRAFHDLRRLTTLFLFNNSLSELQGDCLAHLGALEFLRLNGNPWSCDCKARSLWEWLHRFRGSSSNVICESPERMHGKDLKVLRAEDFRNCSGSESLHQIKTFSAADRGASKAHHPHHSSKEKGGEKGLHSSHPAARPGPRRPAKNCTSHKNRNRTLKPGSLGPRKSGHEFPDYVPDYQHKFSFGVMPTGLPKRKGKCTRRTPIRAPSGVQQAAGGCAGLVASRLVFVLVLVAIMR
SIO_010081: RTN4RL1
subclass of: SO_0000673
so part of: RTN4RL1
location: complement(322480..>323853)
location: region:322480-323853:-1
so has part: feature:322480-323853:-1:exon

XP_031412256.1
type: Protein
SIO_000068: ncbiprotein

position:322480:-1
position: 322480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322480-323853:-1:exon

RPA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 363300..384783
location: region:363300-384783:1
so has part: feature:363300-384783:1:exon
subclass of: SO_0000010

100538396
type: Gene
SIO_000068: ncbigene

position:363300:1
position: 363300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384783:1
position: 384783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363300-384783:1:exon

RPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RPA1
product: replication protein A1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_010721720.3
SIO_010081: RPA1
subclass of: SO_0000673
so part of: RPA1
location: join(363300..363448,363640..363687,363778..363856,364836..364944,365698..365786,369603..369689,370693..370825,371651..371753,372827..372895,373040..373232,374404..374543,376176..376324,377560..377692,378736..378912,380193..380300,383361..383447,383769..384783)
location: region:363300-384783:1
so has part: feature:363300-363448:1:exon
so has part: feature:363640-363687:1:exon
so has part: feature:363778-363856:1:exon
so has part: feature:364836-364944:1:exon
so has part: feature:365698-365786:1:exon
so has part: feature:369603-369689:1:exon
so has part: feature:370693-370825:1:exon
so has part: feature:371651-371753:1:exon
so has part: feature:372827-372895:1:exon
so has part: feature:373040-373232:1:exon
so has part: feature:374404-374543:1:exon
so has part: feature:376176-376324:1:exon
so has part: feature:377560-377692:1:exon
so has part: feature:378736-378912:1:exon
so has part: feature:380193-380300:1:exon
so has part: feature:383361-383447:1:exon
so has part: feature:383769-384783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:363300-363448:1:exon

position:363448:1
position: 363448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:363640-363687:1:exon

position:363640:1
position: 363640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363687:1
position: 363687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:363778-363856:1:exon

position:363778:1
position: 363778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363856:1
position: 363856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:364836-364944:1:exon

position:364836:1
position: 364836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364944:1
position: 364944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:365698-365786:1:exon

position:365698:1
position: 365698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365786:1
position: 365786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:369603-369689:1:exon

position:369603:1
position: 369603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369689:1
position: 369689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:370693-370825:1:exon

position:370693:1
position: 370693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370825:1
position: 370825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:371651-371753:1:exon

position:371651:1
position: 371651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371753:1
position: 371753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:372827-372895:1:exon

position:372827:1
position: 372827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372895:1
position: 372895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:373040-373232:1:exon

position:373040:1
position: 373040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373232:1
position: 373232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:374404-374543:1:exon

position:374404:1
position: 374404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374543:1
position: 374543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:376176-376324:1:exon

position:376176:1
position: 376176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376324:1
position: 376324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:377560-377692:1:exon

position:377560:1
position: 377560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377692:1
position: 377692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:378736-378912:1:exon

position:378736:1
position: 378736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378912:1
position: 378912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:380193-380300:1:exon

position:380193:1
position: 380193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:380300:1
position: 380300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:383361-383447:1:exon

position:383361:1
position: 383361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383447:1
position: 383447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:383769-384783:1:exon

position:383769:1
position: 383769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: replication protein A 70 kDa DNA-binding subunit
translation: MSGRLSEGAIAAIMQGENVCKPVLQVINTRAIATGNGPPRYRVLMSDGVNTLSSFMLATQLNPLVEEERLSAHCICQVNRFIVNSLKDGRRVVILMDLDVLKTADMVGGTVGNPVPYNEGQGQQRSSAPTANTAPNKPQQQNGNLSVAGSAAPKYHAPSNQFSKASAPSSVKTPGGTQSKVVPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADKFFPLIELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVSISDLENTPKDSIVDVIGICKSYEDVTKIVVKANNREVSKRNVHLMDTSGKLVTATLWGNEAEKFDGSRQPVIAIKGARVSDFGGRSLSVMSSSTVVVNPDSPEAFKLRGWFDSEGQLLECASISDVRGGSASGVNTNWKTLYEAKSERLGQGDKADYFSCVGTIVHLRKENCMYQACPSQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMMLLVTIADSLDYQWVTCFQESAEFILGQSATFLGELKEKNEQAFEEVFQNANFNTYEFKIRVKLETYNDESRIKATALDVKPVNYREYSKRLIASIRRNAQLG
SIO_010081: RPA1
subclass of: SO_0000673
so part of: RPA1
location: join(363416..363448,363640..363687,363778..363856,364836..364944,365698..365786,369603..369689,370693..370825,371651..371753,372827..372895,373040..373232,374404..374543,376176..376324,377560..377692,378736..378912,380193..380300,383361..383447,383769..383876)
location: region:363416-383876:1
so has part: feature:363416-363448:1:exon
so has part: feature:363640-363687:1:exon
so has part: feature:363778-363856:1:exon
so has part: feature:364836-364944:1:exon
so has part: feature:365698-365786:1:exon
so has part: feature:369603-369689:1:exon
so has part: feature:370693-370825:1:exon
so has part: feature:371651-371753:1:exon
so has part: feature:372827-372895:1:exon
so has part: feature:373040-373232:1:exon
so has part: feature:374404-374543:1:exon
so has part: feature:376176-376324:1:exon
so has part: feature:377560-377692:1:exon
so has part: feature:378736-378912:1:exon
so has part: feature:380193-380300:1:exon
so has part: feature:383361-383447:1:exon
so has part: feature:383769-383876:1:exon

XP_010720022.1
type: Protein
SIO_000068: ncbiprotein

position:363416:1
position: 363416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383876:1
position: 383876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363416-363448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:363640-363687:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:363778-363856:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:364836-364944:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:365698-365786:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369603-369689:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:370693-370825:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371651-371753:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:372827-372895:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:373040-373232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:374404-374543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:376176-376324:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:377560-377692:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:378736-378912:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:380193-380300:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:383361-383447:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:383769-383876:1:exon

SERPINF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SERPINF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <389284..395001
location: region:389284-395001:1
so has part: feature:389284-395001:1:exon
subclass of: SO_0000010

100539629
type: Gene
SIO_000068: ncbigene

position:389284:1
position: 389284
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:395001:1
position: 395001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389284-395001:1:exon

SERPINF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SERPINF2
product: serpin family F member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 183 samples with support for all annotated introns
transcript id: XM_010721885.1
SIO_010081: SERPINF2
subclass of: SO_0000673
so part of: SERPINF2
location: join(<389284..389364,390376..390775,391077..391220,391408..391611,392456..392598,393158..393362,393950..395001)
location: region:389284-395001:1
so has part: feature:389284-389364:1:exon
so has part: feature:390376-390775:1:exon
so has part: feature:391077-391220:1:exon
so has part: feature:391408-391611:1:exon
so has part: feature:392456-392598:1:exon
so has part: feature:393158-393362:1:exon
so has part: feature:393950-395001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389284-389364:1:exon

position:389364:1
position: 389364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:390376-390775:1:exon

position:390376:1
position: 390376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390775:1
position: 390775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:391077-391220:1:exon

position:391077:1
position: 391077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391220:1
position: 391220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:391408-391611:1:exon

position:391408:1
position: 391408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391611:1
position: 391611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:392456-392598:1:exon

position:392456:1
position: 392456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:392598:1
position: 392598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:393158-393362:1:exon

position:393158:1
position: 393158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393362:1
position: 393362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:393950-395001:1:exon

position:393950:1
position: 393950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SERPINF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SERPINF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-2-antiplasmin
translation: LCFSFQLPLAQAVEQQHLSSDKAVDLKNLKNGGDEESALPGAIPSLPNAKLADTWEIYGTSPSISTSDETGDDESPGNKATAGAGRCHEQEPFGETLSSEEEGEDEEESCDITWKKSQRLANGLMRFSIDLLREVQQESNRNNVILSPLSIALALSNLALGAANQTEKHLLEVMHLESVPCLHHMLSSLRRRLAGATLSLASRVYLQKGSEVKEKFLEESEIFYGAKPVTLSGSSENDLTAINKWVKEATNGQIPTFLQQLPGDTVMLLLNAIHFHGFWRNKFDASFTAPDAFHLDDDFVVSVEMMKAQRYPLSWFTLESQDIQVAKFPFKGNMSFVVIVPNQYIWNTSHVLENFPYGQLCRLFPKEVPTTVKIPKLKLDYHLELNSVLSHMGLQELFISPNLQKISDEPLFVSSIQHQSAMELKEDGVEASAATSVMISRSLSAFNLDRPFIFIIFEEEMGIPLFIGSVKNPNPNAAPQIKELQDLPDATDDNEYPMPK
SIO_010081: SERPINF2
subclass of: SO_0000673
so part of: SERPINF2
location: join(<389284..389364,390376..390775,391077..391220,391408..391611,392456..392598,393158..393362,393950..394275)
location: region:389284-394275:1
so has part: feature:389284-389364:1:exon
so has part: feature:390376-390775:1:exon
so has part: feature:391077-391220:1:exon
so has part: feature:391408-391611:1:exon
so has part: feature:392456-392598:1:exon
so has part: feature:393158-393362:1:exon
so has part: feature:393950-394275:1:exon

XP_010720187.1
type: Protein
SIO_000068: ncbiprotein

position:394275:1
position: 394275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389284-389364:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:390376-390775:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:391077-391220:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:391408-391611:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:392456-392598:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:393158-393362:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:393950-394275:1:exon

SERPINF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SERPINF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 398193..405053
location: region:398193-405053:1
so has part: feature:398193-405053:1:exon
subclass of: SO_0000010

100551276
type: Gene
SIO_000068: ncbigene

position:398193:1
position: 398193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405053:1
position: 405053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398193-405053:1:exon

SERPINF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SERPINF1
product: serpin family F member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_003211742.4
SIO_010081: SERPINF1
subclass of: SO_0000673
so part of: SERPINF1
location: join(398193..398311,400857..400942,401358..401556,401635..401790,402549..402752,403547..403689,404070..404280,404641..405053)
location: region:398193-405053:1
so has part: feature:398193-398311:1:exon
so has part: feature:400857-400942:1:exon
so has part: feature:401358-401556:1:exon
so has part: feature:401635-401790:1:exon
so has part: feature:402549-402752:1:exon
so has part: feature:403547-403689:1:exon
so has part: feature:404070-404280:1:exon
so has part: feature:404641-405053:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:398193-398311:1:exon

position:398311:1
position: 398311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:400857-400942:1:exon

position:400857:1
position: 400857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400942:1
position: 400942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:401358-401556:1:exon

position:401358:1
position: 401358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401556:1
position: 401556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:401635-401790:1:exon

position:401635:1
position: 401635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401790:1
position: 401790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:402549-402752:1:exon

position:402549:1
position: 402549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402752:1
position: 402752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:403547-403689:1:exon

position:403547:1
position: 403547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403689:1
position: 403689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:404070-404280:1:exon

position:404070:1
position: 404070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404280:1
position: 404280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:404641-405053:1:exon

position:404641:1
position: 404641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SERPINF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SERPINF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pigment epithelium-derived factor
translation: MQIPAILLLLGLLTIPSKSQNSPTGQNSPTTDGTVGEVEEEDPFYKTPVNKLAAAVSNFGYDLYRQQSSRTATANVLLSPFSLATALSGLSLGAGERTEDVISRALFYDLLNKAEVHNTYKDLLASVTGPEKSLKSASRIIVEKRLRVKSTFHSQLEKSYKMRLRALSGNTQLDLQEINNWVRQQTRGRILRFMKDMPTDVSILLAGAAYFKGTWKTKFDTKRTVLNDFHLDEDRTVKVSMMSDPKAILRYGFDSELNCKIAQLPLTEGVSAMFFLPTKVTQNMTLIEESLTSEFIHDVDRELKTVHAVLSLPKLKLNYEEALGNTLKETRLQSLFTSPDFTKISAKPIKLSHVQHKAVLELNEDGEKSTPNPGVNAARLTFPIEYHVDRPFLLVLRDDTTGTLLFIGKILDPRSV
SIO_010081: SERPINF1
subclass of: SO_0000673
so part of: SERPINF1
location: join(400865..400942,401358..401556,401635..401790,402549..402752,403547..403689,404070..404280,404641..404900)
location: region:400865-404900:1
so has part: feature:400865-400942:1:exon
so has part: feature:401358-401556:1:exon
so has part: feature:401635-401790:1:exon
so has part: feature:402549-402752:1:exon
so has part: feature:403547-403689:1:exon
so has part: feature:404070-404280:1:exon
so has part: feature:404641-404900:1:exon

XP_003211790.1
type: Protein
SIO_000068: ncbiprotein

position:400865:1
position: 400865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404900:1
position: 404900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:400865-400942:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:401358-401556:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:401635-401790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:402549-402752:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:403547-403689:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:404070-404280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:404641-404900:1:exon

SMYD4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SMYD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(405539..>411956)
location: region:405539-411956:-1
so has part: feature:405539-411956:-1:exon
subclass of: SO_0000010

100539783
type: Gene
SIO_000068: ncbigene

position:405539:-1
position: 405539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411956:-1
position: 411956
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:405539-411956:-1:exon

SMYD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SMYD4
product: SET and MYND domain containing 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_010721886.2
SIO_010081: SMYD4
subclass of: SO_0000673
so part of: SMYD4
location: complement(join(405539..405858,406540..406663,407015..407131,407565..407697,408388..408551,408847..409029,409305..410469,411423..411511,411688..411830,411898..>411956))
location: region:405539-411956:-1
so has part: feature:411898-411956:-1:exon
so has part: feature:411688-411830:-1:exon
so has part: feature:411423-411511:-1:exon
so has part: feature:409305-410469:-1:exon
so has part: feature:408847-409029:-1:exon
so has part: feature:408388-408551:-1:exon
so has part: feature:407565-407697:-1:exon
so has part: feature:407015-407131:-1:exon
so has part: feature:406540-406663:-1:exon
so has part: feature:405539-405858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:411898-411956:-1:exon

position:411898:-1
position: 411898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:411688-411830:-1:exon

position:411688:-1
position: 411688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411830:-1
position: 411830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:411423-411511:-1:exon

position:411423:-1
position: 411423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411511:-1
position: 411511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:409305-410469:-1:exon

position:409305:-1
position: 409305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410469:-1
position: 410469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:408847-409029:-1:exon

position:408847:-1
position: 408847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:409029:-1
position: 409029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:408388-408551:-1:exon

position:408388:-1
position: 408388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:408551:-1
position: 408551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407565-407697:-1:exon

position:407565:-1
position: 407565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407697:-1
position: 407697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:407015-407131:-1:exon

position:407015:-1
position: 407015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:407131:-1
position: 407131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:406540-406663:-1:exon

position:406540:-1
position: 406540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:406663:-1
position: 406663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:405539-405858:-1:exon

position:405858:-1
position: 405858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMYD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SMYD4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: SET and MYND domain-containing protein 4
translation: ERLAAAPLGDALRVGCGLFGPEEAALRRLCDRVRTGKEPGAARFYREEGNRRFGRRRYRDAARLYSQAAAHEPPXSPEVALCFANRSAALFHLGHFEVCLEDIARAESHGYPDRLLPKVLLRKAECLLRLGRLQDATDTLTAVENKMTVDGIMTGPTHLMLLKKLNQLKTEIHQGSCSEPSREAHGDIQRESEIWEENGSISGASSSLSLNFNTERGRHLVASQNILPGQNLLKEKAFVSVLCPGEGDSLLLQDSSETVWDTQVTNADLYCHHCLKQLLASVPCCGCSYAKYCSQNCADVAWEQYHRTECPLGALLLVLGVFCHVALRTVLLAGFSEVSRLVEWSHSIDDSNKDLCNAEAGDKHPSEALDTRAGTKGIPGCNDNGQYQSSYQAVFNLLPHVEKHSPEHKFLCMLSIVAMCKKLQETGLEAAVLNRESSTMGSEQKMCGKTFEELSPELMIIAEAMLRHVLQLQCNAQAVTVMQELESGDGAVVNKKPVRLATAFFPVLSLLNHSCSPNISVSFSGTVATVRASQPIPSGQEIFHCYGPHRCRMRVAERQQLLSQYFFECRCQACLDELESDVESVSMRNSFCCPSCQASMQGEEMLCCSNEACALSVSRERLSRRLLDLQQQMEKALELLRDSNADEAIRMLLKCQMDARNFLSPEHLLMGELEDHLAQIYATLGKWQEAARHLERSIQLVEMHHGPSSVEMGHELFKLAQILFNGFAVSEALSTIQRAEEILSVHCGPQSTQIQELQEMKTCLLELPKSILQRT
SIO_010081: SMYD4
subclass of: SO_0000673
so part of: SMYD4
location: complement(join(405708..405858,406540..406663,407015..407131,407565..407697,408388..408551,408847..409029,409305..410469,411423..411511,411688..411830,411898..>411956))
location: region:405708-411956:-1
so has part: feature:411898-411956:-1:exon
so has part: feature:411688-411830:-1:exon
so has part: feature:411423-411511:-1:exon
so has part: feature:409305-410469:-1:exon
so has part: feature:408847-409029:-1:exon
so has part: feature:408388-408551:-1:exon
so has part: feature:407565-407697:-1:exon
so has part: feature:407015-407131:-1:exon
so has part: feature:406540-406663:-1:exon
so has part: feature:405708-405858:-1:exon

XP_010720188.1
type: Protein
SIO_000068: ncbiprotein

position:405708:-1
position: 405708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:411898-411956:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:411688-411830:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:411423-411511:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:409305-410469:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:408847-409029:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:408388-408551:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407565-407697:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407015-407131:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:406540-406663:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:405708-405858:-1:exon

LOC100539477
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100539477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 412397..418461
location: region:412397-418461:1
so has part: feature:412397-418461:1:exon
subclass of: SO_0000010

100539477
type: Gene
SIO_000068: ncbigene

position:412397:1
position: 412397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418461:1
position: 418461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:412397-418461:1:exon

LOC100539477
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100539477
product: WD repeat-containing protein 81-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_031556397.1
SIO_010081: LOC100539477
subclass of: SO_0000673
so part of: LOC100539477
location: join(412397..413398,413592..413757,413937..414102,414405..415103,415263..415408,415613..415792,416689..418461)
location: region:412397-418461:1
so has part: feature:412397-413398:1:exon
so has part: feature:413592-413757:1:exon
so has part: feature:413937-414102:1:exon
so has part: feature:414405-415103:1:exon
so has part: feature:415263-415408:1:exon
so has part: feature:415613-415792:1:exon
so has part: feature:416689-418461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412397-413398:1:exon

position:413398:1
position: 413398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413592-413757:1:exon

position:413592:1
position: 413592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:413757:1
position: 413757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413937-414102:1:exon

position:413937:1
position: 413937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414102:1
position: 414102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:414405-415103:1:exon

position:414405:1
position: 414405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415103:1
position: 415103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:415263-415408:1:exon

position:415263:1
position: 415263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415408:1
position: 415408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:415613-415792:1:exon

position:415613:1
position: 415613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:415792:1
position: 415792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:416689-418461:1:exon

position:416689:1
position: 416689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100539477
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: LOC100539477
product: WD repeat-containing protein 81-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 151 samples with support for all annotated introns
transcript id: XR_004161766.1
SIO_010081: LOC100539477
so part of: LOC100539477
location: join(412397..413398,413592..413757,413937..414102,414405..415103,415263..415408,415613..415792,416689..417815,418024..418461)
location: region:412397-418461:1
so has part: feature:412397-413398:1:exon
so has part: feature:413592-413757:1:exon
so has part: feature:413937-414102:1:exon
so has part: feature:414405-415103:1:exon
so has part: feature:415263-415408:1:exon
so has part: feature:415613-415792:1:exon
so has part: feature:416689-417815:1:exon
so has part: feature:418024-418461:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:412397-413398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413592-413757:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413937-414102:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414405-415103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:415263-415408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415613-415792:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:416689-417815:1:exon

position:417815:1
position: 417815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:418024-418461:1:exon

position:418024:1
position: 418024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100539477
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100539477
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 81-like
translation: MILELVLQVAPGGGSSGGRLNSRKEAGLLAAVTLTQKIVVCLSDTTLMDILPKISQEVLLPVLGFLTSLSVGFPSGAQARVVLCVKTISLIALICLRIGQEMVQQHLSDTVRTFFGAFSLLQELQDQGLTVESLSGCEVPVMEVPLMEGKLLALDPAVLMELQKVFNPEMAYITYIPFSCLLGDVIRTVVPNHSLVEKLASLYLENVNPKNLQVVGLEQAPSMAGSDQDMRGTEAFSSPQEDSHSGTFGSVLVGNRIQVPVDTQREGLGFLRLSAGTDGFIPSSSCEENTLKHDLPRSTHMLCGNWLAYWQYEIGVSQHDPRFHFHQIKLQSFSGHSGAIKCVAPLSSEDFFLSGSKDKTVRLWPLYNYGDGTSEVPPRFTYSEHKKSVFYVSQLEASQHVVSCDGTVHIWDQFTGKLIRTFDELDSKAPITAVTTMPPPYHSISVASADSVLRFIDHRKPGLQHEFRLASGVNAGLIRCLAVSPNGRSVMAGFSSGFIVLLDTRTGLIMRGWPAHEGDILQIKAAEGNVLISSSSDHSMTVWKELEQKPLHHYKSASEPIHAFDLYGNEVVTGTVANKIGVYSMLESSALPVSTTKLSSENFRGTLTSLAVLPMKCHLLLGSDNGVIRLLA
SIO_010081: LOC100539477
subclass of: SO_0000673
so part of: LOC100539477
location: join(413184..413398,413592..413757,413937..414102,414405..415103,415263..415408,415613..415792,416689..417015)
location: region:413184-417015:1
so has part: feature:413184-413398:1:exon
so has part: feature:413592-413757:1:exon
so has part: feature:413937-414102:1:exon
so has part: feature:414405-415103:1:exon
so has part: feature:415263-415408:1:exon
so has part: feature:415613-415792:1:exon
so has part: feature:416689-417015:1:exon

XP_031412257.1
type: Protein
SIO_000068: ncbiprotein

position:413184:1
position: 413184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:417015:1
position: 417015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413184-413398:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413592-413757:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413937-414102:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:414405-415103:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:415263-415408:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:415613-415792:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:416689-417015:1:exon

LOC104913884
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 421166..426232
location: region:421166-426232:1
so has part: feature:421166-426232:1:exon
subclass of: SO_0000010

104913884
type: Gene
SIO_000068: ncbigene

position:421166:1
position: 421166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426232:1
position: 426232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421166-426232:1:exon

LOC104913884
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913884
product: WD repeat-containing protein 81-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_019621828.1
SIO_010081: LOC104913884
subclass of: SO_0000673
so part of: LOC104913884
location: join(421166..421210,421687..425262,425608..425715,425793..426232)
location: region:421166-426232:1
so has part: feature:421166-421210:1:exon
so has part: feature:421687-425262:1:exon
so has part: feature:425608-425715:1:exon
so has part: feature:425793-426232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:421166-421210:1:exon

position:421210:1
position: 421210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421687-425262:1:exon

position:421687:1
position: 421687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425262:1
position: 425262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:425608-425715:1:exon

position:425608:1
position: 425608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425715:1
position: 425715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:425793-426232:1:exon

position:425793:1
position: 425793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913884
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 81-like
translation: MAAGPLPGATMDALLRSVEKDLSIDRWQLAAASEGTHVTALVPHKWLANLRERRALPTLCPRPEGLSEVEVRTFLQRSVQKLPAGWTRVEIHGLRKERLMRPLRVPPAADPRGGSAETLHGFMQRVASQNYRNLWGRAHCLYVRPYRHAHAPPAVPVLDALRAALQKAYGCPILQVGRSVPCASPAKGVSSVPSSCPNVLQAEALLESAEMLYVIYPYVQYCLHDIVTFSPAKLTNSHAKILFLLFHVLQAMRACHQAGLACGAFSLRDVAVDEKLCSRLRVNFREYEGPRKEEINAGSDLERVSEQSGAGMRGDTARCSTCQQELRDLVLQWVHGRVSNFDYLMRLNSLAGRRMGDPNYHPVLPWVVDFTTKNGKFRDLRKSKFRLNKGDKQLDFTYEMTKQAFVAGGSSGEQLHVPHHISDVLSDITYYVYTARRTPKSVLCCHVRSQWEPNEYPASMERMQSWTPDECIPEFYTDPSIFRSIHPDMPDLDVPSWCSSYEEFIEVHRMLLESREVSQDLHHWIDLTFGYKLQGKDAVKEKNVCLHLVDNHTHLTTYGVVQLFDQPHPRRMVGPAYTPAEAPAIARPLLQNIKETVILEDIQCPVTDAVNGLVLEATPTETTWSGEKPIAGEDDLEQGTEALDSISVSSRAPDQPSSSSAQPSTIPAYPTEGKASGVRPLRRSKAGAADQADRDDMKITLPEGFNPLQALEELEKLDNFLVKGLSSDMQLMEQPGEEPLLGLSDLFQRDMQALGILIAEIIFAPRIRPSKPDASLLERFLMVRNLCRYHPKEIPAPLQHVLHILLQLSVPVEKLLKTRLGKDAVQLFEYKPISQGLPPPCPTQLLSPFSSIVPFPTYFPALHRFIFTYQAKKIEDEGQGRELVFQLWQQLEGILSEITPEGLEILLPFILSLMSEENTAVYAAWYLFEPIAKSLGPKNANKYLLKPLIGAYETPCSRHGRFYLYTDCFVAQLIVRLGLQSFILNLLPHILQILVGIESSREESKSLLGAAEDDESGGGSPMSCVFGEEIKMDVEHSSAALDLLDYTSGVSFHDQAYLPEGEDFQSGLYVGESLQPQEQESLSLGRLSDKSSASEVSLGEDRPADGDSQKDKSSLKSVDSSQDLKQSEDSEEEEEEREEEEHDDTGADTELAGAVDVGVSVDAGTSVDVTLADDGSEPEDGEGEELPDHSDDKEQTILLDTACKMVRWLSAKLGPTVTSRFIARNLLRLLTSCYVGPTRQQFVPSNDENGPLSTGNIYQKRPVLGDQVSKPVLACLLHVAYLYGEPVLTYQYLPYISYLVSVSSSLSVPVGMCDRGEKTVLCRAAGVGWAGDRGQLRLLEQAGLDVGRWDRLGEVKGGFSTVFKKNTGKVYNFFSLKFFAE
SIO_010081: LOC104913884
subclass of: SO_0000673
so part of: LOC104913884
location: join(421189..421210,421687..425262,425608..425715,425793..426232)
location: region:421189-426232:1
so has part: feature:421189-421210:1:exon
so has part: feature:421687-425262:1:exon
so has part: feature:425608-425715:1:exon
so has part: feature:425793-426232:1:exon

XP_019477373.1
type: Protein
SIO_000068: ncbiprotein

position:421189:1
position: 421189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421189-421210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:421687-425262:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425608-425715:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425793-426232:1:exon

PRPF8
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PRPF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(426448..444455)
location: region:426448-444455:-1
so has part: feature:426448-444455:-1:exon
subclass of: SO_0000010

100551124
type: Gene
SIO_000068: ncbigene

position:426448:-1
position: 426448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444455:-1
position: 444455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426448-444455:-1:exon

PRPF8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PRPF8
product: pre-mRNA processing factor 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 183 samples with support for all annotated introns
transcript id: XM_003211741.4
SIO_010081: PRPF8
subclass of: SO_0000673
so part of: PRPF8
location: complement(join(426448..426765,427492..427694,427850..427989,428258..428398,428749..428890,428974..429213,429400..429593,429847..430020,430163..430276,430856..430984,431234..431471,431973..432164,432443..432603,432822..432968,433124..433253,433556..433725,433955..434090,434572..434751,434932..435179,435266..435382,435660..435870,436119..436265,436356..436594,436819..437006,437355..437547,437676..437802,438134..438297,438387..438593,438701..438897,439279..439408,439521..439655,439964..440083,440251..440440,440518..440637,440825..441015,441457..441562,441640..441765,442037..442249,442819..443037,443134..443298,443909..444077,444157..444266,444356..444455))
location: region:426448-444455:-1
so has part: feature:444356-444455:-1:exon
so has part: feature:444157-444266:-1:exon
so has part: feature:443909-444077:-1:exon
so has part: feature:443134-443298:-1:exon
so has part: feature:442819-443037:-1:exon
so has part: feature:442037-442249:-1:exon
so has part: feature:441640-441765:-1:exon
so has part: feature:441457-441562:-1:exon
so has part: feature:440825-441015:-1:exon
so has part: feature:440518-440637:-1:exon
so has part: feature:440251-440440:-1:exon
so has part: feature:439964-440083:-1:exon
so has part: feature:439521-439655:-1:exon
so has part: feature:439279-439408:-1:exon
so has part: feature:438701-438897:-1:exon
so has part: feature:438387-438593:-1:exon
so has part: feature:438134-438297:-1:exon
so has part: feature:437676-437802:-1:exon
so has part: feature:437355-437547:-1:exon
so has part: feature:436819-437006:-1:exon
so has part: feature:436356-436594:-1:exon
so has part: feature:436119-436265:-1:exon
so has part: feature:435660-435870:-1:exon
so has part: feature:435266-435382:-1:exon
so has part: feature:434932-435179:-1:exon
so has part: feature:434572-434751:-1:exon
so has part: feature:433955-434090:-1:exon
so has part: feature:433556-433725:-1:exon
so has part: feature:433124-433253:-1:exon
so has part: feature:432822-432968:-1:exon
so has part: feature:432443-432603:-1:exon
so has part: feature:431973-432164:-1:exon
so has part: feature:431234-431471:-1:exon
so has part: feature:430856-430984:-1:exon
so has part: feature:430163-430276:-1:exon
so has part: feature:429847-430020:-1:exon
so has part: feature:429400-429593:-1:exon
so has part: feature:428974-429213:-1:exon
so has part: feature:428749-428890:-1:exon
so has part: feature:428258-428398:-1:exon
so has part: feature:427850-427989:-1:exon
so has part: feature:427492-427694:-1:exon
so has part: feature:426448-426765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444356-444455:-1:exon

position:444356:-1
position: 444356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444157-444266:-1:exon

position:444157:-1
position: 444157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444266:-1
position: 444266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:443909-444077:-1:exon

position:443909:-1
position: 443909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444077:-1
position: 444077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:443134-443298:-1:exon

position:443134:-1
position: 443134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443298:-1
position: 443298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:442819-443037:-1:exon

position:442819:-1
position: 442819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443037:-1
position: 443037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:442037-442249:-1:exon

position:442037:-1
position: 442037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442249:-1
position: 442249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:441640-441765:-1:exon

position:441640:-1
position: 441640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441765:-1
position: 441765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:441457-441562:-1:exon

position:441457:-1
position: 441457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441562:-1
position: 441562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:440825-441015:-1:exon

position:440825:-1
position: 440825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:441015:-1
position: 441015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:440518-440637:-1:exon

position:440518:-1
position: 440518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440637:-1
position: 440637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:440251-440440:-1:exon

position:440251:-1
position: 440251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440440:-1
position: 440440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:439964-440083:-1:exon

position:439964:-1
position: 439964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440083:-1
position: 440083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:439521-439655:-1:exon

position:439521:-1
position: 439521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439655:-1
position: 439655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:439279-439408:-1:exon

position:439279:-1
position: 439279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:439408:-1
position: 439408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:438701-438897:-1:exon

position:438701:-1
position: 438701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438897:-1
position: 438897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:438387-438593:-1:exon

position:438387:-1
position: 438387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438593:-1
position: 438593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:438134-438297:-1:exon

position:438134:-1
position: 438134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:438297:-1
position: 438297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:437676-437802:-1:exon

position:437676:-1
position: 437676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437802:-1
position: 437802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:437355-437547:-1:exon

position:437355:-1
position: 437355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437547:-1
position: 437547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:436819-437006:-1:exon

position:436819:-1
position: 436819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:437006:-1
position: 437006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:436356-436594:-1:exon

position:436356:-1
position: 436356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436594:-1
position: 436594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:436119-436265:-1:exon

position:436119:-1
position: 436119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436265:-1
position: 436265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:435660-435870:-1:exon

position:435660:-1
position: 435660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435870:-1
position: 435870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:435266-435382:-1:exon

position:435266:-1
position: 435266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435382:-1
position: 435382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:434932-435179:-1:exon

position:434932:-1
position: 434932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435179:-1
position: 435179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:434572-434751:-1:exon

position:434572:-1
position: 434572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434751:-1
position: 434751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:433955-434090:-1:exon

position:433955:-1
position: 433955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434090:-1
position: 434090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:433556-433725:-1:exon

position:433556:-1
position: 433556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433725:-1
position: 433725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:433124-433253:-1:exon

position:433124:-1
position: 433124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433253:-1
position: 433253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:432822-432968:-1:exon

position:432822:-1
position: 432822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432968:-1
position: 432968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:432443-432603:-1:exon

position:432443:-1
position: 432443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432603:-1
position: 432603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:431973-432164:-1:exon

position:431973:-1
position: 431973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432164:-1
position: 432164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:431234-431471:-1:exon

position:431234:-1
position: 431234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431471:-1
position: 431471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:430856-430984:-1:exon

position:430856:-1
position: 430856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430984:-1
position: 430984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:430163-430276:-1:exon

position:430163:-1
position: 430163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430276:-1
position: 430276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:429847-430020:-1:exon

position:429847:-1
position: 429847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:430020:-1
position: 430020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:429400-429593:-1:exon

position:429400:-1
position: 429400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429593:-1
position: 429593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:428974-429213:-1:exon

position:428974:-1
position: 428974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429213:-1
position: 429213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:428749-428890:-1:exon

position:428749:-1
position: 428749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428890:-1
position: 428890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:428258-428398:-1:exon

position:428258:-1
position: 428258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428398:-1
position: 428398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:427850-427989:-1:exon

position:427850:-1
position: 427850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427989:-1
position: 427989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:427492-427694:-1:exon

position:427492:-1
position: 427492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427694:-1
position: 427694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:426448-426765:-1:exon

position:426765:-1
position: 426765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRPF8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PRPF8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pre-mRNA-processing-splicing factor 8
translation: MAAVFPYRGGCAPVPTPMAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEVAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVA…
SIO_010081: PRPF8
subclass of: SO_0000673
so part of: PRPF8
location: complement(join(426611..426765,427492..427694,427850..427989,428258..428398,428749..428890,428974..429213,429400..429593,429847..430020,430163..430276,430856..430984,431234..431471,431973..432164,432443..432603,432822..432968,433124..433253,433556..433725,433955..434090,434572..434751,434932..435179,435266..435382,435660..435870,436119..436265,436356..436594,436819..437006,437355..437547,437676..437802,438134..438297,438387..438593,438701..438897,439279..439408,439521..439655,439964..440083,440251..440440,440518..440637,440825..441015,441457..441562,441640..441765,442037..442249,442819..443037,443134..443298,443909..444077,444157..444256))
location: region:426611-444256:-1
so has part: feature:444157-444256:-1:exon
so has part: feature:443909-444077:-1:exon
so has part: feature:443134-443298:-1:exon
so has part: feature:442819-443037:-1:exon
so has part: feature:442037-442249:-1:exon
so has part: feature:441640-441765:-1:exon
so has part: feature:441457-441562:-1:exon
so has part: feature:440825-441015:-1:exon
so has part: feature:440518-440637:-1:exon
so has part: feature:440251-440440:-1:exon
so has part: feature:439964-440083:-1:exon
so has part: feature:439521-439655:-1:exon
so has part: feature:439279-439408:-1:exon
so has part: feature:438701-438897:-1:exon
so has part: feature:438387-438593:-1:exon
so has part: feature:438134-438297:-1:exon
so has part: feature:437676-437802:-1:exon
so has part: feature:437355-437547:-1:exon
so has part: feature:436819-437006:-1:exon
so has part: feature:436356-436594:-1:exon
so has part: feature:436119-436265:-1:exon
so has part: feature:435660-435870:-1:exon
so has part: feature:435266-435382:-1:exon
so has part: feature:434932-435179:-1:exon
so has part: feature:434572-434751:-1:exon
so has part: feature:433955-434090:-1:exon
so has part: feature:433556-433725:-1:exon
so has part: feature:433124-433253:-1:exon
so has part: feature:432822-432968:-1:exon
so has part: feature:432443-432603:-1:exon
so has part: feature:431973-432164:-1:exon
so has part: feature:431234-431471:-1:exon
so has part: feature:430856-430984:-1:exon
so has part: feature:430163-430276:-1:exon
so has part: feature:429847-430020:-1:exon
so has part: feature:429400-429593:-1:exon
so has part: feature:428974-429213:-1:exon
so has part: feature:428749-428890:-1:exon
so has part: feature:428258-428398:-1:exon
so has part: feature:427850-427989:-1:exon
so has part: feature:427492-427694:-1:exon
so has part: feature:426611-426765:-1:exon

XP_003211789.1
type: Protein
SIO_000068: ncbiprotein

position:426611:-1
position: 426611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444256:-1
position: 444256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:444157-444256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443909-444077:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:443134-443298:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442819-443037:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:442037-442249:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:441640-441765:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:441457-441562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:440825-441015:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:440518-440637:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:440251-440440:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:439964-440083:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:439521-439655:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:439279-439408:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:438701-438897:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:438387-438593:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:438134-438297:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:437676-437802:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:437355-437547:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:436819-437006:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:436356-436594:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:436119-436265:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:435660-435870:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:435266-435382:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:434932-435179:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:434572-434751:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:433955-434090:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:433556-433725:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:433124-433253:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:432822-432968:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:432443-432603:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:431973-432164:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:431234-431471:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:430856-430984:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:430163-430276:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:429847-430020:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:429400-429593:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:428974-429213:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:428749-428890:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:428258-428398:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:427850-427989:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:427492-427694:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:426611-426765:-1:exon

TLCD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TLCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(445455..451771)
location: region:445455-451771:-1
so has part: feature:445455-451771:-1:exon
subclass of: SO_0000010

100539322
type: Gene
SIO_000068: ncbigene

position:445455:-1
position: 445455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451771:-1
position: 451771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445455-451771:-1:exon

TLCD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TLCD2
product: TLC domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_031556399.1
SIO_010081: TLCD2
subclass of: SO_0000673
so part of: TLCD2
location: complement(join(445455..446656,447566..447648,448198..448280,448790..451771))
location: region:445455-451771:-1
so has part: feature:448790-451771:-1:exon
so has part: feature:448198-448280:-1:exon
so has part: feature:447566-447648:-1:exon
so has part: feature:445455-446656:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:448790-451771:-1:exon

position:448790:-1
position: 448790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:448198-448280:-1:exon

position:448198:-1
position: 448198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448280:-1
position: 448280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:447566-447648:-1:exon

position:447566:-1
position: 447566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447648:-1
position: 447648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:445455-446656:-1:exon

position:446656:-1
position: 446656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TLCD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TLCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TLC domain-containing protein 2
translation: MRCPGRCRCPGRGLWGEAEPSVSAFGAPHGRQRMPMALGPDLLLVAGSFAAFRLLNRGVERLMPPPPSARRNRWKWRNIWTSLAHSVLSGGGALAGFCLYPGLHEDLVGTHPPGAHSLVAVSVGYFLEDFVDMLCNQKLHQSWELLFHHSVVIVCFGIAVLLHQYVGFALVALLVEINSIFLHLRQILLMADLVHTTCYRLNSIINLGTYVVFRIATLAWMTHWLFLNRQHVPLATYTVGTVGMAIMTPMNIILFYRLLRSDFFKSSRDTRREKEK
SIO_010081: TLCD2
subclass of: SO_0000673
so part of: TLCD2
location: complement(join(446279..446656,447566..447648,448198..448280,448790..449076))
location: region:446279-449076:-1
so has part: feature:448790-449076:-1:exon
so has part: feature:448198-448280:-1:exon
so has part: feature:447566-447648:-1:exon
so has part: feature:446279-446656:-1:exon

XP_031412259.1
type: Protein
SIO_000068: ncbiprotein

position:446279:-1
position: 446279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449076:-1
position: 449076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448790-449076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448198-448280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:447566-447648:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446279-446656:-1:exon

LOC104913847
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 453906..462086
location: region:453906-462086:1
so has part: feature:453906-462086:1:exon
subclass of: SO_0000010

104913847
type: Gene
SIO_000068: ncbigene

position:453906:1
position: 453906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462086:1
position: 462086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453906-462086:1:exon

LOC104913847
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913847
product: apoptosis-inducing factor 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031556398.1
SIO_010081: LOC104913847
subclass of: SO_0000673
so part of: LOC104913847
location: join(453906..454685,454774..454883,455426..455470,455552..455633,455754..455866,456257..456343,456473..456564,456789..456919,457440..457555,457905..457976,458306..458369,458769..458845,458927..459044,459141..459239,459491..459566,459779..459883,459991..462086)
location: region:453906-462086:1
so has part: feature:453906-454685:1:exon
so has part: feature:454774-454883:1:exon
so has part: feature:455426-455470:1:exon
so has part: feature:455552-455633:1:exon
so has part: feature:455754-455866:1:exon
so has part: feature:456257-456343:1:exon
so has part: feature:456473-456564:1:exon
so has part: feature:456789-456919:1:exon
so has part: feature:457440-457555:1:exon
so has part: feature:457905-457976:1:exon
so has part: feature:458306-458369:1:exon
so has part: feature:458769-458845:1:exon
so has part: feature:458927-459044:1:exon
so has part: feature:459141-459239:1:exon
so has part: feature:459491-459566:1:exon
so has part: feature:459779-459883:1:exon
so has part: feature:459991-462086:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453906-454685:1:exon

position:454685:1
position: 454685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454774-454883:1:exon

position:454774:1
position: 454774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454883:1
position: 454883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:455426-455470:1:exon

position:455426:1
position: 455426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455470:1
position: 455470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:455552-455633:1:exon

position:455552:1
position: 455552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455633:1
position: 455633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:455754-455866:1:exon

position:455754:1
position: 455754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455866:1
position: 455866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:456257-456343:1:exon

position:456257:1
position: 456257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456343:1
position: 456343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:456473-456564:1:exon

position:456473:1
position: 456473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456564:1
position: 456564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:456789-456919:1:exon

position:456789:1
position: 456789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456919:1
position: 456919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:457440-457555:1:exon

position:457440:1
position: 457440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457555:1
position: 457555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:457905-457976:1:exon

position:457905:1
position: 457905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457976:1
position: 457976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:458306-458369:1:exon

position:458306:1
position: 458306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458369:1
position: 458369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:458769-458845:1:exon

position:458769:1
position: 458769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458845:1
position: 458845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:458927-459044:1:exon

position:458927:1
position: 458927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459044:1
position: 459044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:459141-459239:1:exon

position:459141:1
position: 459141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459239:1
position: 459239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:459491-459566:1:exon

position:459491:1
position: 459491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459566:1
position: 459566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:459779-459883:1:exon

position:459779:1
position: 459779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459883:1
position: 459883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:459991-462086:1:exon

position:459991:1
position: 459991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913847
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913847
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apoptosis-inducing factor 3-like
translation: MVAGYPVLLVRNKMEFSALGSRCPHYGAPLSKGVLRGHRLRCPWHGSCFNIKTGDIEEYPSLDCLPCFKVTVEDGKVFVTAKKKDLESSLRVKDMSKRCLLNRNTMLLLGGGVAALACAETLRQEGFTGRIIMATKEKHAPYDKSKLSKEMNLKAEDIYLRKPEFFCAHGIELWTEKEAVSVDFQKQKVRFMDGSSQKYNQLFIATGGNSSFLKVPGADLQNVCHLQTPEDSSKVLELASGKNLVIVGASFIGMEAAAFLSDKAAVISVVEKHEFPFQKTLGPQVGGVVLKMLQSKGVKFYMKKELHELKGKDGKVTEAILASGEKLPADVVVVGIGVTPNSAFLKGTSIAKDNSGAILVDLHMQTNIPNVFAGGDVVSFPVALLNGDHSSIHHQQVAEAHGSIAAFNMLKKQKELYTVPFFWTTMLGRSIHYAGCGKGYTDTVLKGSLEKQKFLIFYLKDGFVTAAASLNCDPMVSLIAEVLYLGKKISKEEAEAYDINNIPL
SIO_010081: LOC104913847
subclass of: SO_0000673
so part of: LOC104913847
location: join(454589..454685,454774..454883,455426..455470,455552..455633,455754..455866,456257..456343,456473..456564,456789..456919,457440..457555,457905..457976,458306..458369,458769..458845,458927..459044,459141..459239,459491..459566,459779..459883,459991..460021)
location: region:454589-460021:1
so has part: feature:454589-454685:1:exon
so has part: feature:454774-454883:1:exon
so has part: feature:455426-455470:1:exon
so has part: feature:455552-455633:1:exon
so has part: feature:455754-455866:1:exon
so has part: feature:456257-456343:1:exon
so has part: feature:456473-456564:1:exon
so has part: feature:456789-456919:1:exon
so has part: feature:457440-457555:1:exon
so has part: feature:457905-457976:1:exon
so has part: feature:458306-458369:1:exon
so has part: feature:458769-458845:1:exon
so has part: feature:458927-459044:1:exon
so has part: feature:459141-459239:1:exon
so has part: feature:459491-459566:1:exon
so has part: feature:459779-459883:1:exon
so has part: feature:459991-460021:1:exon

XP_031412258.1
type: Protein
SIO_000068: ncbiprotein

position:454589:1
position: 454589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460021:1
position: 460021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454589-454685:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454774-454883:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455426-455470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:455552-455633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455754-455866:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:456257-456343:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:456473-456564:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:456789-456919:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:457440-457555:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:457905-457976:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:458306-458369:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:458769-458845:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:458927-459044:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:459141-459239:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:459491-459566:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:459779-459883:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:459991-460021:1:exon

LOC116217342
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217342
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(456335..457507)
location: region:456335-457507:-1
so has part: feature:456335-457507:-1:exon
subclass of: SO_0000011

116217342
type: Gene
SIO_000068: ncbigene

position:456335:-1
position: 456335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457507:-1
position: 457507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:456335-457507:-1:exon

LOC116217342
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217342
product: uncharacterized LOC116217342, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004161768.1
SIO_010081: LOC116217342
subclass of: SO_0000673
so part of: LOC116217342
location: complement(join(456335..456541,456769..456946,457416..457507))
location: region:456335-457507:-1
so has part: feature:457416-457507:-1:exon
so has part: feature:456769-456946:-1:exon
so has part: feature:456335-456541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:457416-457507:-1:exon

position:457416:-1
position: 457416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:456769-456946:-1:exon

position:456769:-1
position: 456769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456946:-1
position: 456946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456335-456541:-1:exon

position:456541:-1
position: 456541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217342
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217342
product: uncharacterized LOC116217342, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004161767.1
SIO_010081: LOC116217342
subclass of: SO_0000673
so part of: LOC116217342
location: complement(join(456551..456640,456769..456946,457416..457507))
location: region:456551-457507:-1
so has part: feature:457416-457507:-1:exon
so has part: feature:456769-456946:-1:exon
so has part: feature:456551-456640:-1:exon

position:456551:-1
position: 456551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457416-457507:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:456769-456946:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:456551-456640:-1:exon

position:456640:-1
position: 456640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCARF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SCARF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(472736..478497)
location: region:472736-478497:-1
so has part: feature:472736-478497:-1:exon
subclass of: SO_0000010

100539012
type: Gene
SIO_000068: ncbigene

position:472736:-1
position: 472736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478497:-1
position: 478497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472736-478497:-1:exon

SCARF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SCARF1
product: scavenger receptor class F member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 179 samples with support for all annotated introns
transcript id: XM_010721726.3
SIO_010081: SCARF1
subclass of: SO_0000673
so part of: SCARF1
location: complement(join(472736..474163,474476..474613,474716..474840,474916..475027,475149..475252,475323..475451,475529..475747,476109..476634,476714..476815,477011..477072,477729..478497))
location: region:472736-478497:-1
so has part: feature:477729-478497:-1:exon
so has part: feature:477011-477072:-1:exon
so has part: feature:476714-476815:-1:exon
so has part: feature:476109-476634:-1:exon
so has part: feature:475529-475747:-1:exon
so has part: feature:475323-475451:-1:exon
so has part: feature:475149-475252:-1:exon
so has part: feature:474916-475027:-1:exon
so has part: feature:474716-474840:-1:exon
so has part: feature:474476-474613:-1:exon
so has part: feature:472736-474163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:477729-478497:-1:exon

position:477729:-1
position: 477729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477011-477072:-1:exon

position:477011:-1
position: 477011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477072:-1
position: 477072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:476714-476815:-1:exon

position:476714:-1
position: 476714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476815:-1
position: 476815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:476109-476634:-1:exon

position:476109:-1
position: 476109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476634:-1
position: 476634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:475529-475747:-1:exon

position:475529:-1
position: 475529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475747:-1
position: 475747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:475323-475451:-1:exon

position:475323:-1
position: 475323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475451:-1
position: 475451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:475149-475252:-1:exon

position:475149:-1
position: 475149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475252:-1
position: 475252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:474916-475027:-1:exon

position:474916:-1
position: 474916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:475027:-1
position: 475027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:474716-474840:-1:exon

position:474716:-1
position: 474716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474840:-1
position: 474840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:474476-474613:-1:exon

position:474476:-1
position: 474476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474613:-1
position: 474613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:472736-474163:-1:exon

position:474163:-1
position: 474163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCARF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SCARF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: scavenger receptor class F member 1
translation: MAEGRGMPWGHEGHRLKQPQGAVGWAMGQCPAGAVPCVRGLSPVPCIPLAAKVRNRQGRGILCLLLPPAPLAWGWDASSRVSSGRNQGWREEEAEPQERNPRTDRRMDRRSPGRMASTHLLLCLQLWLWVQGSAQELDPNGRNVCKVGSPAVNLACCPGWKQEGRECTAALCEGEDACGPREVCVRPGLCRCKPGFFGADCSSPCPAQYWGHDCKRLCLCHPGGTCEAESGRCTCNPERWGELCQFRCPCGPHGRCDPTTGACRCEQGWWGPDCKRQCQCNLATSRCDPLTGHCHCRLGWWGRKCRFKCSCNLSPCVQETGNCKCKAGFWGSACQWHCDCLHGSCNPLNGHCSCEPGFQGRSCQDPCPAGMYGSQCVHSCGNCKHNQPCSSVDGFCLECQPGWNGTLCKERCMPGFHGQGCLQPCPHCRQGDICDAETGSCPRCEPGWTGPSCNSSCPAGTFGDGCQLLCPECVWGSCDPVSGDCLCQAGYWGASCNDTCPEGFFGVNCSSPCQCSRGTCHPAQGNCILSVTDHAALAAAILIPLLLLLLCVVCCCCGAGPADARDRAAVPDDDVVARMKHHVHVVLANISAMMPCFALNNSKLPKVTVSHHDAEIPFNPSFIESPSAAWASDSSFSSFDTDNEGPEYSVPPREGVPLLSGAELQAGMPPPSEALPDPTAFSSEDVSQPFTIPRTSSIAKAKRPSVSFAEGTKFSTAETPSPGRKPKAMWGPSKLSLQSGDVGTEISAEQAASDGYESPDPLSKGDESHRPSPRATPGGRRRMITNTRHVAQRVEALEAAAKRGSWDGKRKEPNVTTIYMTVGTAGQDPKAEGGVEGPVQAVLKRLGSLQRGRWAAKEEPMVRRSMEGIQKPPRRALAQRRDSANGCKQRESVPGAPGELCPGKEQHPPGKRQSFPLESTKSTGGQDGVGEGLGAAERGKSLELALSVETKGQVAQEEEPKYENVSSRNEDAPTNPATT
SIO_010081: SCARF1
subclass of: SO_0000673
so part of: SCARF1
location: complement(join(473187..474163,474476..474613,474716..474840,474916..475027,475149..475252,475323..475451,475529..475747,476109..476634,476714..476815,477011..477072,477729..478174))
location: region:473187-478174:-1
so has part: feature:477729-478174:-1:exon
so has part: feature:477011-477072:-1:exon
so has part: feature:476714-476815:-1:exon
so has part: feature:476109-476634:-1:exon
so has part: feature:475529-475747:-1:exon
so has part: feature:475323-475451:-1:exon
so has part: feature:475149-475252:-1:exon
so has part: feature:474916-475027:-1:exon
so has part: feature:474716-474840:-1:exon
so has part: feature:474476-474613:-1:exon
so has part: feature:473187-474163:-1:exon

XP_010720028.1
type: Protein
SIO_000068: ncbiprotein

position:473187:-1
position: 473187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478174:-1
position: 478174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:477729-478174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477011-477072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476714-476815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476109-476634:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:475529-475747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:475323-475451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475149-475252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:474916-475027:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:474716-474840:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:474476-474613:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:473187-474163:-1:exon

RILP
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RILP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(478602..482600)
location: region:478602-482600:-1
so has part: feature:478602-482600:-1:exon
subclass of: SO_0000010

100539168
type: Gene
SIO_000068: ncbigene

position:478602:-1
position: 478602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482600:-1
position: 482600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:478602-482600:-1:exon

RILP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RILP
product: Rab interacting lysosomal protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 209 samples with support for all annotated introns
transcript id: XM_010721724.1
SIO_010081: RILP
subclass of: SO_0000673
so part of: RILP
location: complement(join(478602..479197,479440..479523,480810..480932,481063..481229,481306..481497,481659..481780,482010..482133,482421..482600))
location: region:478602-482600:-1
so has part: feature:482421-482600:-1:exon
so has part: feature:482010-482133:-1:exon
so has part: feature:481659-481780:-1:exon
so has part: feature:481306-481497:-1:exon
so has part: feature:481063-481229:-1:exon
so has part: feature:480810-480932:-1:exon
so has part: feature:479440-479523:-1:exon
so has part: feature:478602-479197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482421-482600:-1:exon

position:482421:-1
position: 482421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482010-482133:-1:exon

position:482010:-1
position: 482010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482133:-1
position: 482133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:481659-481780:-1:exon

position:481659:-1
position: 481659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481780:-1
position: 481780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:481306-481497:-1:exon

position:481306:-1
position: 481306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481497:-1
position: 481497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:481063-481229:-1:exon

position:481063:-1
position: 481063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481229:-1
position: 481229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:480810-480932:-1:exon

position:480810:-1
position: 480810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480932:-1
position: 480932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:479440-479523:-1:exon

position:479440:-1
position: 479440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479523:-1
position: 479523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:478602-479197:-1:exon

position:479197:-1
position: 479197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RILP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RILP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab-interacting lysosomal protein
translation: MAEALGAELRRLSGRFGPDAVAGLVPPVVRLLELLEALVAPVGSEGEALLAERQDEEDLEQRLWEAERRERALRGRLAQLEEQNQQLLGQLAESHHQEDSTVRKEREVMLRLKEVVDKQRDELRAQAHEIVCKSRDTEALQEQLHRFMSMNEELRHKVAVVQAQLKSALEKKSDLEAAVLQTQREMSRRSRAAPEAPLPQPNQEGAAPLPAEQPPCQDAGRSPAQCCFSMEELQQILQERNELKTNLFLVQEELAYYQRELLNEERIPSFFLDAMKSTIKKQRRKIRAKMLGTAEESASSDEEEGAWLPARGADCVDAPPPESKIRSFFGLWYQGSSSKDPPIPSCSGAWEIIDSLDTQQEQVGEHRPEQATPAL
SIO_010081: RILP
subclass of: SO_0000673
so part of: RILP
location: complement(join(479053..479197,479440..479523,480810..480932,481063..481229,481306..481497,481659..481780,482010..482133,482421..482591))
location: region:479053-482591:-1
so has part: feature:482421-482591:-1:exon
so has part: feature:482010-482133:-1:exon
so has part: feature:481659-481780:-1:exon
so has part: feature:481306-481497:-1:exon
so has part: feature:481063-481229:-1:exon
so has part: feature:480810-480932:-1:exon
so has part: feature:479440-479523:-1:exon
so has part: feature:479053-479197:-1:exon

XP_010720026.1
type: Protein
SIO_000068: ncbiprotein

position:479053:-1
position: 479053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482591:-1
position: 482591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482421-482591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482010-482133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481659-481780:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481306-481497:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481063-481229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480810-480932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479440-479523:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479053-479197:-1:exon

SLC43A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC43A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(484535..505100)
location: region:484535-505100:-1
so has part: feature:484535-505100:-1:exon
subclass of: SO_0000010

100550970
type: Gene
SIO_000068: ncbigene

position:484535:-1
position: 484535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505100:-1
position: 505100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484535-505100:-1:exon

SLC43A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC43A2
product: solute carrier family 43 member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 207 samples with support for all annotated introns
transcript id: XM_031556400.1
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(484535..488827,489666..489789,491473..491546,492476..492608,493026..493164,496502..496645,497239..497441,497851..497984,498183..498275,503141..503217,503923..503978,504894..505100))
location: region:484535-505100:-1
so has part: feature:504894-505100:-1:exon
so has part: feature:503923-503978:-1:exon
so has part: feature:503141-503217:-1:exon
so has part: feature:498183-498275:-1:exon
so has part: feature:497851-497984:-1:exon
so has part: feature:497239-497441:-1:exon
so has part: feature:496502-496645:-1:exon
so has part: feature:493026-493164:-1:exon
so has part: feature:492476-492608:-1:exon
so has part: feature:491473-491546:-1:exon
so has part: feature:489666-489789:-1:exon
so has part: feature:484535-488827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504894-505100:-1:exon

position:504894:-1
position: 504894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503923-503978:-1:exon

position:503923:-1
position: 503923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503978:-1
position: 503978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:503141-503217:-1:exon

position:503141:-1
position: 503141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503217:-1
position: 503217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:498183-498275:-1:exon

position:498183:-1
position: 498183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498275:-1
position: 498275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:497851-497984:-1:exon

position:497851:-1
position: 497851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497984:-1
position: 497984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:497239-497441:-1:exon

position:497239:-1
position: 497239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497441:-1
position: 497441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:496502-496645:-1:exon

position:496502:-1
position: 496502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496645:-1
position: 496645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:493026-493164:-1:exon

position:493026:-1
position: 493026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:493164:-1
position: 493164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:492476-492608:-1:exon

position:492476:-1
position: 492476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:492608:-1
position: 492608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:491473-491546:-1:exon

position:491473:-1
position: 491473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491546:-1
position: 491546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:489666-489789:-1:exon

position:489666:-1
position: 489666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:489789:-1
position: 489789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:484535-488827:-1:exon

position:488827:-1
position: 488827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC43A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC43A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large neutral amino acids transporter small subunit 4
translation: MLNLAFTIGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCVLIAYGASNPNSLSVLIFIALALNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGIKVIYDFGVSFILILLVWASCAGLVFLNCFFNWPLEPFPGPEDMDYTVKIKFSWLGFDHKITGKQFYKQVTTVGRRLSVGSSMKGPKESAALQENNKLCLSTVDLEVKCQPDSTASPSFMKSVFSPILLLSLITMCVTQLRLIFYMGAMNTILEFLSGDESQVSLYTSIFGVLQLLCLLTAPVIGYIMDWRLKECDDGSEDNEESNAEQGDKKKKKRDRQIQKITNATNAFAFTNVLLVGFGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLISALFALLQQPLFMALTGPLEGDPLWVNVGLLGLSLLGFCLPIYLVCYRRRLERERKQKIEDSKLFLKINGTPNEEAFV
SIO_010081: SLC43A2
subclass of: SO_0000673
so part of: SLC43A2
location: complement(join(488666..488827,489666..489789,491473..491546,492476..492608,493026..493164,496502..496645,497239..497441,497851..497984,498183..498275,503141..503217,503923..503978,504894..505003))
location: region:488666-505003:-1
so has part: feature:504894-505003:-1:exon
so has part: feature:503923-503978:-1:exon
so has part: feature:503141-503217:-1:exon
so has part: feature:498183-498275:-1:exon
so has part: feature:497851-497984:-1:exon
so has part: feature:497239-497441:-1:exon
so has part: feature:496502-496645:-1:exon
so has part: feature:493026-493164:-1:exon
so has part: feature:492476-492608:-1:exon
so has part: feature:491473-491546:-1:exon
so has part: feature:489666-489789:-1:exon
so has part: feature:488666-488827:-1:exon

XP_031412260.1
type: Protein
SIO_000068: ncbiprotein

position:488666:-1
position: 488666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505003:-1
position: 505003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504894-505003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503923-503978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503141-503217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498183-498275:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497851-497984:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497239-497441:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:496502-496645:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:493026-493164:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492476-492608:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:491473-491546:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:489666-489789:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488666-488827:-1:exon

PITPNA
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PITPNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(506217..526694)
location: region:506217-526694:-1
so has part: feature:506217-526694:-1:exon
subclass of: SO_0000010

100538704
type: Gene
SIO_000068: ncbigene

position:506217:-1
position: 506217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526694:-1
position: 526694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506217-526694:-1:exon

PITPNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PITPNA
product: phosphatidylinositol transfer protein alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010721727.2
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(506217..508979,509622..509691,510405..510527,511926..512036,512968..513045,514418..514501,514829..514903,515827..515834,519561..519652,520210..520355,526352..526382,526675..526694))
location: region:506217-526694:-1
so has part: feature:526675-526694:-1:exon
so has part: feature:526352-526382:-1:exon
so has part: feature:520210-520355:-1:exon
so has part: feature:519561-519652:-1:exon
so has part: feature:515827-515834:-1:exon
so has part: feature:514829-514903:-1:exon
so has part: feature:514418-514501:-1:exon
so has part: feature:512968-513045:-1:exon
so has part: feature:511926-512036:-1:exon
so has part: feature:510405-510527:-1:exon
so has part: feature:509622-509691:-1:exon
so has part: feature:506217-508979:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:526675-526694:-1:exon

position:526675:-1
position: 526675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:526352-526382:-1:exon

position:526352:-1
position: 526352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526382:-1
position: 526382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520210-520355:-1:exon

position:520210:-1
position: 520210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520355:-1
position: 520355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:519561-519652:-1:exon

position:519561:-1
position: 519561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519652:-1
position: 519652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:515827-515834:-1:exon

position:515827:-1
position: 515827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:515834:-1
position: 515834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:514829-514903:-1:exon

position:514829:-1
position: 514829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514903:-1
position: 514903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:514418-514501:-1:exon

position:514418:-1
position: 514418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514501:-1
position: 514501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:512968-513045:-1:exon

position:512968:-1
position: 512968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:513045:-1
position: 513045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:511926-512036:-1:exon

position:511926:-1
position: 511926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512036:-1
position: 512036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:510405-510527:-1:exon

position:510405:-1
position: 510405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:510527:-1
position: 510527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:509622-509691:-1:exon

position:509622:-1
position: 509622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:509691:-1
position: 509691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:506217-508979:-1:exon

position:508979:-1
position: 508979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PITPNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PITPNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol transfer protein alpha isoform
translation: MCRVILPVSVEEYQVGQLYSVAEASKNETGGGEGVEVLVNEPYERDGERGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVITNEYMKDDFLIKIETWHKSDLGTQENVHTLEPDVWKNVEAIYIDIADRSQVLPKDYKAEEDPAKFKSVKTGRGPLGPNWKKELGKQTDCPYMCAYKLVTVKFKWWGLQNKIENFIQKQEKRLFTNFHRQLFCWLDKWVDLTMEDIRRMEDETKRQLDEMREKDPVKGMTAADD
SIO_010081: PITPNA
subclass of: SO_0000673
so part of: PITPNA
location: complement(join(509644..509691,510405..510527,511926..512036,512968..513045,514418..514501,514829..514903,515827..515834,519561..519652,520210..520355,526352..526382,526675..526679))
location: region:509644-526679:-1
so has part: feature:526675-526679:-1:exon
so has part: feature:526352-526382:-1:exon
so has part: feature:520210-520355:-1:exon
so has part: feature:519561-519652:-1:exon
so has part: feature:515827-515834:-1:exon
so has part: feature:514829-514903:-1:exon
so has part: feature:514418-514501:-1:exon
so has part: feature:512968-513045:-1:exon
so has part: feature:511926-512036:-1:exon
so has part: feature:510405-510527:-1:exon
so has part: feature:509644-509691:-1:exon

XP_010720029.1
type: Protein
SIO_000068: ncbiprotein

position:509644:-1
position: 509644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526679:-1
position: 526679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:526675-526679:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526352-526382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:520210-520355:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:519561-519652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:515827-515834:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:514829-514903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:514418-514501:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:512968-513045:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:511926-512036:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:510405-510527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:509644-509691:-1:exon

INPP5K
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(537881..552021)
location: region:537881-552021:-1
so has part: feature:537881-552021:-1:exon
subclass of: SO_0000010

100538550
type: Gene
SIO_000068: ncbigene

position:537881:-1
position: 537881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552021:-1
position: 552021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537881-552021:-1:exon

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019621888.2
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(537881..540557,541558..541662,542890..542973,543481..543618,543854..544046,545697..545723,546288..546397,546919..547030,547870..548042,548313..548429,551048..551156,551437..551544,551694..552021))
location: region:537881-552021:-1
so has part: feature:551694-552021:-1:exon
so has part: feature:551437-551544:-1:exon
so has part: feature:551048-551156:-1:exon
so has part: feature:548313-548429:-1:exon
so has part: feature:547870-548042:-1:exon
so has part: feature:546919-547030:-1:exon
so has part: feature:546288-546397:-1:exon
so has part: feature:545697-545723:-1:exon
so has part: feature:543854-544046:-1:exon
so has part: feature:543481-543618:-1:exon
so has part: feature:542890-542973:-1:exon
so has part: feature:541558-541662:-1:exon
so has part: feature:537881-540557:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:551694-552021:-1:exon

position:551694:-1
position: 551694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:551437-551544:-1:exon

position:551437:-1
position: 551437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551544:-1
position: 551544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551048-551156:-1:exon

position:551048:-1
position: 551048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551156:-1
position: 551156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:548313-548429:-1:exon

position:548313:-1
position: 548313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548429:-1
position: 548429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:547870-548042:-1:exon

position:547870:-1
position: 547870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548042:-1
position: 548042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:546919-547030:-1:exon

position:546919:-1
position: 546919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547030:-1
position: 547030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:546288-546397:-1:exon

position:546288:-1
position: 546288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546397:-1
position: 546397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:545697-545723:-1:exon

position:545697:-1
position: 545697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545723:-1
position: 545723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:543854-544046:-1:exon

position:543854:-1
position: 543854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544046:-1
position: 544046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:543481-543618:-1:exon

position:543481:-1
position: 543481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:543618:-1
position: 543618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:542890-542973:-1:exon

position:542890:-1
position: 542890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542973:-1
position: 542973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:541558-541662:-1:exon

position:541558:-1
position: 541558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541662:-1
position: 541662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:537881-540557:-1:exon

position:540557:-1
position: 540557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INPP5K
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: INPP5K
product: inositol polyphosphate-5-phosphatase K, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010721728.3
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(537881..540557,541558..541662,542890..542973,543481..543618,543854..544046,546288..546397,546919..547030,547870..548042,548313..548429,551048..551156,551437..551544,551694..552010))
location: region:537881-552010:-1
so has part: feature:551694-552010:-1:exon
so has part: feature:551437-551544:-1:exon
so has part: feature:551048-551156:-1:exon
so has part: feature:548313-548429:-1:exon
so has part: feature:547870-548042:-1:exon
so has part: feature:546919-547030:-1:exon
so has part: feature:546288-546397:-1:exon
so has part: feature:543854-544046:-1:exon
so has part: feature:543481-543618:-1:exon
so has part: feature:542890-542973:-1:exon
so has part: feature:541558-541662:-1:exon
so has part: feature:537881-540557:-1:exon

position:552010:-1
position: 552010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551694-552010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551437-551544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551048-551156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:548313-548429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547870-548042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546919-547030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546288-546397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543854-544046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543481-543618:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:542890-542973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:541558-541662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:537881-540557:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X2
translation: MASLGSEDAFQESAALSLHDLESLHTFRSRSASVSSAGSSGRLQLRQRVAQLMACVEDISSDDEVHEEVCRTLDEAFLIWGKKMKDKWREFRLHLVTWNVGTASPPPDVTSLLQLDSLSPAMDMYVIGLQEVNSRITNFLSDLAFDDPWSIFFMSVLSPLGYIKLSSVRMQGLLLLIFVKHAHLPFIRDVHTHYTRTGLYGYWGNKGGVTIRMSLYGHTICFINCHLPAHMENTEQRLDDFEKILEMQFEEENIPNTLDHDVLFWFGDLNFRIADYGIHFVRESINNKRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTSEKKRKPAWTDRILWRVKSLCQRALKEDDFSEEEQTISVTLNNYISHMSYGISDHKPVTGTFELELKPLLSDPLVTLSPEGEWSAEHDVLISYSAVPGFPSSAWDWIGLFKVTFRHANDYVTYAWVEDDEISSNEDSKQVYMSAAEIPDMGGEFLLCYYSNNLQSIVGISQPFQIRPNRTLIGKGPAQEENAWLQKPDNLESHNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(540459..540557,541558..541662,542890..542973,543481..543618,543854..544046,546288..546397,546919..547030,547870..548042,548313..548429,551048..551156,551437..551544,551694..551968))
location: region:540459-551968:-1
so has part: feature:551694-551968:-1:exon
so has part: feature:551437-551544:-1:exon
so has part: feature:551048-551156:-1:exon
so has part: feature:548313-548429:-1:exon
so has part: feature:547870-548042:-1:exon
so has part: feature:546919-547030:-1:exon
so has part: feature:546288-546397:-1:exon
so has part: feature:543854-544046:-1:exon
so has part: feature:543481-543618:-1:exon
so has part: feature:542890-542973:-1:exon
so has part: feature:541558-541662:-1:exon
so has part: feature:540459-540557:-1:exon

XP_010720030.2
type: Protein
SIO_000068: ncbiprotein

position:540459:-1
position: 540459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551968:-1
position: 551968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:551694-551968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551437-551544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551048-551156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:548313-548429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547870-548042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546919-547030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546288-546397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543854-544046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543481-543618:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:542890-542973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:541558-541662:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:540459-540557:-1:exon

INPP5K
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: INPP5K
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol polyphosphate 5-phosphatase K isoform X1
translation: MASLGSEDAFQESAALSLHDLESLHTFRSRSASVSSAGSSGRLQLRQRVAQLMACVEDISSDDEVHEEVCRTLDEAFLIWGKKMKDKWREFRLHLVTWNVGTASPPPDVTSLLQLDSLSPAMDMYVIGLQEVNSRITNFLSDLAFDDPWSIFFMSVLSPLGYIKLSSVRMQGLLLLIFVKHAHLPFIRDVHTHYTRTGLYGYWGNKGGVTIRMSLYGHTICFINCHLPAHMENTEQRLDDFEKILEMQFEEENIPNTLDHDVLFWFGDLNFRIADYGIHFVRESINNKRYNLLWEKDQLNMAKKKEAFLQEFIEGPLQFKPTYKFDLHSDVYDTREQKSLFWFNEKKRKPAWTDRILWRVKSLCQRALKEDDFSEEEQTISVTLNNYISHMSYGISDHKPVTGTFELELKPLLSDPLVTLSPEGEWSAEHDVLISYSAVPGFPSSAWDWIGLFKVTFRHANDYVTYAWVEDDEISSNEDSKQVYMSAAEIPDMGGEFLLCYYSNNLQSIVGISQPFQIRPNRTLIGKGPAQEENAWLQKPDNLESHNEF
SIO_010081: INPP5K
subclass of: SO_0000673
so part of: INPP5K
location: complement(join(540459..540557,541558..541662,542890..542973,543481..543618,543854..544046,545697..545723,546288..546397,546919..547030,547870..548042,548313..548429,551048..551156,551437..551544,551694..551968))
location: region:540459-551968:-1
so has part: feature:551694-551968:-1:exon
so has part: feature:551437-551544:-1:exon
so has part: feature:551048-551156:-1:exon
so has part: feature:548313-548429:-1:exon
so has part: feature:547870-548042:-1:exon
so has part: feature:546919-547030:-1:exon
so has part: feature:546288-546397:-1:exon
so has part: feature:545697-545723:-1:exon
so has part: feature:543854-544046:-1:exon
so has part: feature:543481-543618:-1:exon
so has part: feature:542890-542973:-1:exon
so has part: feature:541558-541662:-1:exon
so has part: feature:540459-540557:-1:exon

XP_019477433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:551694-551968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551437-551544:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551048-551156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:548313-548429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:547870-548042:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:546919-547030:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:546288-546397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:545697-545723:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543854-544046:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:543481-543618:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:542890-542973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:541558-541662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:540459-540557:-1:exon

LOC109370617
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370617
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(553506..568122)
location: region:553506-568122:-1
so has part: feature:553506-568122:-1:exon
subclass of: SO_0000011

109370617
type: Gene
SIO_000068: ncbigene

position:553506:-1
position: 553506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568122:-1
position: 568122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553506-568122:-1:exon

LOC109370617
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370617
product: uncharacterized LOC109370617
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_004161771.1
SIO_010081: LOC109370617
subclass of: SO_0000673
so part of: LOC109370617
location: complement(join(553506..560920,562222..568122))
location: region:553506-568122:-1
so has part: feature:562222-568122:-1:exon
so has part: feature:553506-560920:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:562222-568122:-1:exon

position:562222:-1
position: 562222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:553506-560920:-1:exon

position:560920:-1
position: 560920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217343
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217343
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(568281..579532)
location: region:568281-579532:-1
so has part: feature:568281-579532:-1:exon
subclass of: SO_0000011

116217343
type: Gene
SIO_000068: ncbigene

position:568281:-1
position: 568281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579532:-1
position: 579532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:568281-579532:-1:exon

LOC116217343
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217343
product: uncharacterized LOC116217343
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_004161770.1
SIO_010081: LOC116217343
subclass of: SO_0000673
so part of: LOC116217343
location: complement(join(568281..574506,575295..579532))
location: region:568281-579532:-1
so has part: feature:575295-579532:-1:exon
so has part: feature:568281-574506:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:575295-579532:-1:exon

position:575295:-1
position: 575295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:568281-574506:-1:exon

position:574506:-1
position: 574506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YWHAE
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: YWHAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 587920..598788
location: region:587920-598788:1
so has part: feature:587920-598788:1:exon
subclass of: SO_0000010

100550664
type: Gene
SIO_000068: ncbigene

position:587920:1
position: 587920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598788:1
position: 598788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587920-598788:1:exon

YWHAE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: YWHAE
product: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_031556401.1
SIO_010081: YWHAE
subclass of: SO_0000673
so part of: YWHAE
location: join(587920..588150,592687..592793,593477..593683,594412..594548,596323..596369,597857..598788)
location: region:587920-598788:1
so has part: feature:587920-588150:1:exon
so has part: feature:592687-592793:1:exon
so has part: feature:593477-593683:1:exon
so has part: feature:594412-594548:1:exon
so has part: feature:596323-596369:1:exon
so has part: feature:597857-598788:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:587920-588150:1:exon

position:588150:1
position: 588150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:592687-592793:1:exon

position:592687:1
position: 592687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:592793:1
position: 592793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:593477-593683:1:exon

position:593477:1
position: 593477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:593683:1
position: 593683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:594412-594548:1:exon

position:594412:1
position: 594412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:594548:1
position: 594548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:596323-596369:1:exon

position:596323:1
position: 596323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596369:1
position: 596369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:597857-598788:1:exon

position:597857:1
position: 597857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YWHAE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: YWHAE
product: tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010721729.3
SIO_010081: YWHAE
subclass of: SO_0000673
so part of: YWHAE
location: join(587921..588150,592687..592793,593477..593683,594412..594548,597857..598788)
location: region:587921-598788:1
so has part: feature:587921-588150:1:exon
so has part: feature:592687-592793:1:exon
so has part: feature:593477-593683:1:exon
so has part: feature:594412-594548:1:exon
so has part: feature:597857-598788:1:exon

position:587921:1
position: 587921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587921-588150:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592687-592793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:593477-593683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594412-594548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597857-598788:1:exon

YWHAE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: YWHAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein epsilon isoform X1
translation: MVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQNKEALQDVEDENQ
SIO_010081: YWHAE
subclass of: SO_0000673
so part of: YWHAE
location: join(587953..588150,592687..592793,593477..593683,594412..594548,597857..597909)
location: region:587953-597909:1
so has part: feature:587953-588150:1:exon
so has part: feature:592687-592793:1:exon
so has part: feature:593477-593683:1:exon
so has part: feature:594412-594548:1:exon
so has part: feature:597857-597909:1:exon

XP_010720031.1
type: Protein
SIO_000068: ncbiprotein

position:587953:1
position: 587953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597909:1
position: 597909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587953-588150:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592687-592793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:593477-593683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594412-594548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:597857-597909:1:exon

YWHAE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: YWHAE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 14-3-3 protein epsilon isoform X2
translation: MVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYYKMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYYEILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDDS
SIO_010081: YWHAE
subclass of: SO_0000673
so part of: YWHAE
location: join(587953..588150,592687..592793,593477..593683,594412..594548,596323..596330)
location: region:587953-596330:1
so has part: feature:587953-588150:1:exon
so has part: feature:592687-592793:1:exon
so has part: feature:593477-593683:1:exon
so has part: feature:594412-594548:1:exon
so has part: feature:596323-596330:1:exon

XP_031412261.1
type: Protein
SIO_000068: ncbiprotein

position:596330:1
position: 596330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587953-588150:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592687-592793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:593477-593683:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:594412-594548:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:596323-596330:1:exon

MYO1C
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MYO1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(599327..619547)
location: region:599327-619547:-1
so has part: feature:599327-619547:-1:exon
subclass of: SO_0000010

100550817
type: Gene
SIO_000068: ncbigene

position:599327:-1
position: 599327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619547:-1
position: 619547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599327-619547:-1:exon

MYO1C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MYO1C
product: myosin IC
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 215 samples with support for all annotated introns
transcript id: XM_010721732.3
SIO_010081: MYO1C
subclass of: SO_0000673
so part of: MYO1C
location: complement(join(599327..600935,601965..602064,602291..602388,602782..602852,603788..603923,604297..604352,604450..604543,605538..605621,606092..606251,606565..606649,607099..607167,607258..607334,607518..607631,607873..607990,608487..608592,608768..608848,609112..609158,609386..609480,610016..610107,610492..610572,610955..611060,611694..611776,612000..612119,612294..612365,612680..612793,613031..613129,613334..613513,614241..614321,615232..615430,618656..618771,619392..619547))
location: region:599327-619547:-1
so has part: feature:619392-619547:-1:exon
so has part: feature:618656-618771:-1:exon
so has part: feature:615232-615430:-1:exon
so has part: feature:614241-614321:-1:exon
so has part: feature:613334-613513:-1:exon
so has part: feature:613031-613129:-1:exon
so has part: feature:612680-612793:-1:exon
so has part: feature:612294-612365:-1:exon
so has part: feature:612000-612119:-1:exon
so has part: feature:611694-611776:-1:exon
so has part: feature:610955-611060:-1:exon
so has part: feature:610492-610572:-1:exon
so has part: feature:610016-610107:-1:exon
so has part: feature:609386-609480:-1:exon
so has part: feature:609112-609158:-1:exon
so has part: feature:608768-608848:-1:exon
so has part: feature:608487-608592:-1:exon
so has part: feature:607873-607990:-1:exon
so has part: feature:607518-607631:-1:exon
so has part: feature:607258-607334:-1:exon
so has part: feature:607099-607167:-1:exon
so has part: feature:606565-606649:-1:exon
so has part: feature:606092-606251:-1:exon
so has part: feature:605538-605621:-1:exon
so has part: feature:604450-604543:-1:exon
so has part: feature:604297-604352:-1:exon
so has part: feature:603788-603923:-1:exon
so has part: feature:602782-602852:-1:exon
so has part: feature:602291-602388:-1:exon
so has part: feature:601965-602064:-1:exon
so has part: feature:599327-600935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619392-619547:-1:exon

position:619392:-1
position: 619392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:618656-618771:-1:exon

position:618656:-1
position: 618656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618771:-1
position: 618771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:615232-615430:-1:exon

position:615232:-1
position: 615232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615430:-1
position: 615430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:614241-614321:-1:exon

position:614241:-1
position: 614241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614321:-1
position: 614321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613334-613513:-1:exon

position:613334:-1
position: 613334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613513:-1
position: 613513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:613031-613129:-1:exon

position:613031:-1
position: 613031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613129:-1
position: 613129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:612680-612793:-1:exon

position:612680:-1
position: 612680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612793:-1
position: 612793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:612294-612365:-1:exon

position:612294:-1
position: 612294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612365:-1
position: 612365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:612000-612119:-1:exon

position:612000:-1
position: 612000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612119:-1
position: 612119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:611694-611776:-1:exon

position:611694:-1
position: 611694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611776:-1
position: 611776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:610955-611060:-1:exon

position:610955:-1
position: 610955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611060:-1
position: 611060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:610492-610572:-1:exon

position:610492:-1
position: 610492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610572:-1
position: 610572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:610016-610107:-1:exon

position:610016:-1
position: 610016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610107:-1
position: 610107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:609386-609480:-1:exon

position:609386:-1
position: 609386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609480:-1
position: 609480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:609112-609158:-1:exon

position:609112:-1
position: 609112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609158:-1
position: 609158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:608768-608848:-1:exon

position:608768:-1
position: 608768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608848:-1
position: 608848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:608487-608592:-1:exon

position:608487:-1
position: 608487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608592:-1
position: 608592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:607873-607990:-1:exon

position:607873:-1
position: 607873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607990:-1
position: 607990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:607518-607631:-1:exon

position:607518:-1
position: 607518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607631:-1
position: 607631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:607258-607334:-1:exon

position:607258:-1
position: 607258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607334:-1
position: 607334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:607099-607167:-1:exon

position:607099:-1
position: 607099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607167:-1
position: 607167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:606565-606649:-1:exon

position:606565:-1
position: 606565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606649:-1
position: 606649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:606092-606251:-1:exon

position:606092:-1
position: 606092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606251:-1
position: 606251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:605538-605621:-1:exon

position:605538:-1
position: 605538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605621:-1
position: 605621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:604450-604543:-1:exon

position:604450:-1
position: 604450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604543:-1
position: 604543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:604297-604352:-1:exon

position:604297:-1
position: 604297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:604352:-1
position: 604352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:603788-603923:-1:exon

position:603788:-1
position: 603788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:603923:-1
position: 603923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:602782-602852:-1:exon

position:602782:-1
position: 602782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602852:-1
position: 602852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:602291-602388:-1:exon

position:602291:-1
position: 602291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602388:-1
position: 602388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:601965-602064:-1:exon

position:601965:-1
position: 601965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602064:-1
position: 602064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:599327-600935:-1:exon

position:600935:-1
position: 600935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYO1C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MYO1C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: unconventional myosin-Ic
translation: MESALTARDRVGVQDFVLLENFTSEAAFIENLRKRFKENLIYTYIGSVLVSVNPYKELEIYSKQNMERYRGVSFYEVSPHLYAIADNSYRSLRMERKDQCILISGESGAGKTEATKKILQYYAVTCPASQQVETVKDRLLQSNPVLEAFGNAKTLRNDNSSRFGKYMDVQFDYRGAPVGGHILNYLLEKSRVVHQNHGERNFHIFYQLLEGGEEDLLRRLGLEKSPQQYHYLVKGHCARVSSINDKNDWKVVRRALSIISFNDNEVEDLLSVVASVLHLGNVQFAADEQGNAQVTTENQIKYLARLLAVEGSVLRDALIHKKIIAKGEELISPLNLEQAAYARDALAKAIYGRTFSWLVNKVNKSLAYKEGEFPGWRSTTVLGLLDIYGFEVFQHNSFEQFCINYCNEKLQQLFIELTLKSEQEEYESEGIAWEPVQYFNNKIICDLVEEKFKGIISILDEECLRPGDATDTTFLEKLEETVKNHPHFLTHKLADQKTRKSLGREEFRLLHYAGEVTYSVAGFLDKNNDLLFRNLKETMCNSENPIINQCFDRTELTDKKRPETAATQFKNSLSKLMEILMSKEPSYIRCIKPNDAKQADRFDEVLIRHQVKYLGLMENLRVRRAGFAYRRKYEVFLQRYKSLCPETWPTWDGRPHDGVAVLVKHLGYKQEEYKMGRTKIFIRFPKTLFATEDALEVRKQSLATKMQATWRGFYRRKKFLHMKHSAIAIQSWWRGTLGRRKAAKRKWAVQTIRRFIKGFIYRNHPRCPENEYFLDYIRFSFLMNLKRNLPKNVLDKSWPTPPPSLCEASQLLRQLCMQNMVWTYCKRISPEWKQQLEQKVIASEIFKGKKDNYPQSVPRLFINTRLGNEEINAKVLQALENEAIKYAVPVIKYDRKGYKARSRQLLLTQNAVIIVEDSKIKQRIDYANLTGISVSSLSDNLFVLHVHCEDNKQKGDVVLQSDHVIETLTKTAMRADKVNNININQGSIKFTVGQGKEGVIDFISGSELLIAKAKNGHLTVVAPRLNSR
SIO_010081: MYO1C
subclass of: SO_0000673
so part of: MYO1C
location: complement(join(600909..600935,601965..602064,602291..602388,602782..602852,603788..603923,604297..604352,604450..604543,605538..605621,606092..606251,606565..606649,607099..607167,607258..607334,607518..607631,607873..607990,608487..608592,608768..608848,609112..609158,609386..609480,610016..610107,610492..610572,610955..611060,611694..611776,612000..612119,612294..612365,612680..612793,613031..613129,613334..613513,614241..614321,615232..615430,618656..618771,619392..619517))
location: region:600909-619517:-1
so has part: feature:619392-619517:-1:exon
so has part: feature:618656-618771:-1:exon
so has part: feature:615232-615430:-1:exon
so has part: feature:614241-614321:-1:exon
so has part: feature:613334-613513:-1:exon
so has part: feature:613031-613129:-1:exon
so has part: feature:612680-612793:-1:exon
so has part: feature:612294-612365:-1:exon
so has part: feature:612000-612119:-1:exon
so has part: feature:611694-611776:-1:exon
so has part: feature:610955-611060:-1:exon
so has part: feature:610492-610572:-1:exon
so has part: feature:610016-610107:-1:exon
so has part: feature:609386-609480:-1:exon
so has part: feature:609112-609158:-1:exon
so has part: feature:608768-608848:-1:exon
so has part: feature:608487-608592:-1:exon
so has part: feature:607873-607990:-1:exon
so has part: feature:607518-607631:-1:exon
so has part: feature:607258-607334:-1:exon
so has part: feature:607099-607167:-1:exon
so has part: feature:606565-606649:-1:exon
so has part: feature:606092-606251:-1:exon
so has part: feature:605538-605621:-1:exon
so has part: feature:604450-604543:-1:exon
so has part: feature:604297-604352:-1:exon
so has part: feature:603788-603923:-1:exon
so has part: feature:602782-602852:-1:exon
so has part: feature:602291-602388:-1:exon
so has part: feature:601965-602064:-1:exon
so has part: feature:600909-600935:-1:exon

XP_010720034.1
type: Protein
SIO_000068: ncbiprotein

position:600909:-1
position: 600909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619517:-1
position: 619517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619392-619517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:618656-618771:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615232-615430:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614241-614321:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613334-613513:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:613031-613129:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:612680-612793:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:612294-612365:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:612000-612119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:611694-611776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:610955-611060:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:610492-610572:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:610016-610107:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:609386-609480:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:609112-609158:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:608768-608848:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:608487-608592:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:607873-607990:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:607518-607631:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:607258-607334:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:607099-607167:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:606565-606649:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:606092-606251:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:605538-605621:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:604450-604543:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:604297-604352:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:603788-603923:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:602782-602852:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:602291-602388:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:601965-602064:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:600909-600935:-1:exon

CRK
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CRK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 622834..640258
location: region:622834-640258:1
so has part: feature:622834-640258:1:exon
subclass of: SO_0000010

100550512
type: Gene
SIO_000068: ncbigene

position:622834:1
position: 622834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640258:1
position: 640258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622834-640258:1:exon

CRK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CRK
product: CRK proto-oncogene, adaptor protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003211737.4
SIO_010081: CRK
subclass of: SO_0000673
so part of: CRK
location: join(622834..622843,625053..625250,630831..631366,636889..640258)
location: region:622834-640258:1
so has part: feature:622834-622843:1:exon
so has part: feature:625053-625250:1:exon
so has part: feature:630831-631366:1:exon
so has part: feature:636889-640258:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622834-622843:1:exon

position:622843:1
position: 622843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:625053-625250:1:exon

position:625053:1
position: 625053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625250:1
position: 625250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:630831-631366:1:exon

position:630831:1
position: 630831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631366:1
position: 631366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:636889-640258:1:exon

position:636889:1
position: 636889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CRK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adapter molecule crk
translation: MGSGLAVPLSRCGPRCAPCPGSSALLTGVAASRVALCRGVEARLAACTCLAAKQLRDRAQPGAVTVLQLWLNPTRFRIGDQEFDSLPSLLEFYKIHYLDTTTLIEPVSRSRQNSGVILRQEEVEYVRALFDFNGNDDEDLPFKKGDILKIRDKPEEQWWNAEDSEGKRGMIPVPYVEKCRPSSASVSTLTGGNQDSSHPQPLGGPEPGPYAQPSINTPLPNLQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINMSGQWEGECNGKRGHFPFTHVRLLDQQNPDEDFS
SIO_010081: CRK
subclass of: SO_0000673
so part of: CRK
location: join(622834..622843,625053..625250,630831..631366,636889..637026)
location: region:622834-637026:1
so has part: feature:622834-622843:1:exon
so has part: feature:625053-625250:1:exon
so has part: feature:630831-631366:1:exon
so has part: feature:636889-637026:1:exon

XP_003211785.3
type: Protein
SIO_000068: ncbiprotein

position:637026:1
position: 637026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622834-622843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:625053-625250:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:630831-631366:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636889-637026:1:exon

LOC100538860
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100538860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 646858..649607
location: region:646858-649607:1
so has part: feature:646858-649607:1:exon
subclass of: SO_0000010

100538860
type: Gene
SIO_000068: ncbigene

position:646858:1
position: 646858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:649607:1
position: 649607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:646858-649607:1:exon

LOC100538860
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100538860
product: leucine-rich repeat-containing protein 75A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019621829.2
SIO_010081: LOC100538860
subclass of: SO_0000673
so part of: LOC100538860
location: 646858..649607
location: region:646858-649607:1
so has part: feature:646858-649607:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:646858-649607:1:exon

LOC100538860
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100538860
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 75A-like
translation: MGKPQDNTVDLSGIPLTLKDLERVTSYLQHSSEHIDTVELCFTELTDEMLLQLLPALCGLPHLTTLSLNGNRLTKAILRDLTETLKDPKKFPSVTWIDLGNNVDIFSLPQPFLVSLKRRCPKQGNLPTILEFGEGQVSDLENQDGLAESQEDLRSENCHETPLGKAEGRTVEKQGTETPQT
SIO_010081: LOC100538860
subclass of: SO_0000673
so part of: LOC100538860
location: 647023..647568
location: region:647023-647568:1
so has part: feature:647023-647568:1:exon

XP_019477374.2
type: Protein
SIO_000068: ncbiprotein

position:647023:1
position: 647023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:647568:1
position: 647568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647023-647568:1:exon

LOC104913848
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913848
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(657658..660017)
location: region:657658-660017:-1
so has part: feature:657658-660017:-1:exon
subclass of: SO_0000011

104913848
type: Gene
SIO_000068: ncbigene

position:657658:-1
position: 657658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:660017:-1
position: 660017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657658-660017:-1:exon

LOC104913848
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913848
product: uncharacterized LOC104913848, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XR_795667.3
SIO_010081: LOC104913848
subclass of: SO_0000673
so part of: LOC104913848
location: complement(join(657658..657813,658246..658301,658583..658656,659078..659195,659338..660017))
location: region:657658-660017:-1
so has part: feature:659338-660017:-1:exon
so has part: feature:659078-659195:-1:exon
so has part: feature:658583-658656:-1:exon
so has part: feature:658246-658301:-1:exon
so has part: feature:657658-657813:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:659338-660017:-1:exon

position:659338:-1
position: 659338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:659078-659195:-1:exon

position:659078:-1
position: 659078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659195:-1
position: 659195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:658583-658656:-1:exon

position:658583:-1
position: 658583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658656:-1
position: 658656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:658246-658301:-1:exon

position:658246:-1
position: 658246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658301:-1
position: 658301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:657658-657813:-1:exon

position:657813:-1
position: 657813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913848
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913848
product: uncharacterized LOC104913848, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XR_795666.3
SIO_010081: LOC104913848
subclass of: SO_0000673
so part of: LOC104913848
location: complement(join(657658..657813,658246..658301,658583..658656,659078..659154,659338..659629))
location: region:657658-659629:-1
so has part: feature:659338-659629:-1:exon
so has part: feature:659078-659154:-1:exon
so has part: feature:658583-658656:-1:exon
so has part: feature:658246-658301:-1:exon
so has part: feature:657658-657813:-1:exon

position:659629:-1
position: 659629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659338-659629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:659078-659154:-1:exon

position:659154:-1
position: 659154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:658583-658656:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:658246-658301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:657658-657813:-1:exon

LOC116217368
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217368
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(657884..657957)
location: region:657884-657957:-1
so has part: feature:657884-657957:-1:exon
subclass of: SO_0000578

116217368
type: Gene
SIO_000068: ncbigene

position:657884:-1
position: 657884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657957:-1
position: 657957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:657884-657957:-1:exon

LOC116217368
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217368
product: small nucleolar RNA SNORD65
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00571
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161825.1
SIO_010081: LOC116217368
subclass of: SO_0000673
so part of: LOC116217368
location: complement(657884..657957)
location: region:657884-657957:-1
so has part: feature:657884-657957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:657884-657957:-1:exon

LOC116217364
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217364
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(658738..658812)
location: region:658738-658812:-1
so has part: feature:658738-658812:-1:exon
subclass of: SO_0000578

116217364
type: Gene
SIO_000068: ncbigene

position:658738:-1
position: 658738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658812:-1
position: 658812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658738-658812:-1:exon

LOC116217364
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217364
product: small nucleolar RNA SNORD49
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00277
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161821.1
SIO_010081: LOC116217364
subclass of: SO_0000673
so part of: LOC116217364
location: complement(658738..658812)
location: region:658738-658812:-1
so has part: feature:658738-658812:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:658738-658812:-1:exon

NCBP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NCBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(660662..675678)
location: region:660662-675678:-1
so has part: feature:660662-675678:-1:exon
subclass of: SO_0000010

100547438
type: Gene
SIO_000068: ncbigene

position:660662:-1
position: 660662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675678:-1
position: 675678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660662-675678:-1:exon

NCBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NCBP3
product: nuclear cap binding subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 217 samples with support for all annotated introns
transcript id: XM_010721891.2
SIO_010081: NCBP3
subclass of: SO_0000673
so part of: NCBP3
location: complement(join(660662..663023,663108..663272,664336..664493,665288..665573,666053..666159,666488..666587,667315..667423,668338..668411,670521..670649,672083..672208,673146..673251,673972..674037,675548..675678))
location: region:660662-675678:-1
so has part: feature:675548-675678:-1:exon
so has part: feature:673972-674037:-1:exon
so has part: feature:673146-673251:-1:exon
so has part: feature:672083-672208:-1:exon
so has part: feature:670521-670649:-1:exon
so has part: feature:668338-668411:-1:exon
so has part: feature:667315-667423:-1:exon
so has part: feature:666488-666587:-1:exon
so has part: feature:666053-666159:-1:exon
so has part: feature:665288-665573:-1:exon
so has part: feature:664336-664493:-1:exon
so has part: feature:663108-663272:-1:exon
so has part: feature:660662-663023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:675548-675678:-1:exon

position:675548:-1
position: 675548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673972-674037:-1:exon

position:673972:-1
position: 673972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674037:-1
position: 674037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:673146-673251:-1:exon

position:673146:-1
position: 673146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:673251:-1
position: 673251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:672083-672208:-1:exon

position:672083:-1
position: 672083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672208:-1
position: 672208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:670521-670649:-1:exon

position:670521:-1
position: 670521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:670649:-1
position: 670649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:668338-668411:-1:exon

position:668338:-1
position: 668338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:668411:-1
position: 668411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:667315-667423:-1:exon

position:667315:-1
position: 667315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:667423:-1
position: 667423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:666488-666587:-1:exon

position:666488:-1
position: 666488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666587:-1
position: 666587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:666053-666159:-1:exon

position:666053:-1
position: 666053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:666159:-1
position: 666159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:665288-665573:-1:exon

position:665288:-1
position: 665288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665573:-1
position: 665573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:664336-664493:-1:exon

position:664336:-1
position: 664336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:664493:-1
position: 664493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:663108-663272:-1:exon

position:663108:-1
position: 663108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663272:-1
position: 663272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:660662-663023:-1:exon

position:663023:-1
position: 663023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCBP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NCBP3
product: nuclear cap binding subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_019621890.1
SIO_010081: NCBP3
subclass of: SO_0000673
so part of: NCBP3
location: complement(join(660662..663023,663108..663272,664336..664493,665288..665573,666053..666159,666488..666587,667315..667423,668338..668411,670521..670649,672083..672208,673146..673251,673972..674037,675494..675678))
location: region:660662-675678:-1
so has part: feature:675494-675678:-1:exon
so has part: feature:673972-674037:-1:exon
so has part: feature:673146-673251:-1:exon
so has part: feature:672083-672208:-1:exon
so has part: feature:670521-670649:-1:exon
so has part: feature:668338-668411:-1:exon
so has part: feature:667315-667423:-1:exon
so has part: feature:666488-666587:-1:exon
so has part: feature:666053-666159:-1:exon
so has part: feature:665288-665573:-1:exon
so has part: feature:664336-664493:-1:exon
so has part: feature:663108-663272:-1:exon
so has part: feature:660662-663023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:675494-675678:-1:exon

position:675494:-1
position: 675494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:673972-674037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673146-673251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672083-672208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670521-670649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668338-668411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667315-667423:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666488-666587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666053-666159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665288-665573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:664336-664493:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:663108-663272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:660662-663023:-1:exon

NCBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NCBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear cap-binding protein subunit 3 isoform X2
translation: MEVEEGELETIPVRRSLRELIPDTSRRYENKAGSFITGIDVTSKEAIEKKEQRAKRFHFRAEVNLAQRNVALDRDMMKKAIPKVRLDTIYICGVDEMSTQDIFAYFKEYPPAHIEWLDDTSCNVVWLDEVTATRALINMSSFPDQEKPKGRENNEEKTAEKTKKEKQEESTDDETEEGEVEDENPSDIELDALTQVEEDSLLRNDLRPANKLAKGNKLFMRFATKDDKKELGAARRSQYYMKYGNPNYGGMKGILSNSWKRRYHSRRIHRDVIKKRTFIGDDVGLTPPYKHRHSGLVNVPEEPIEEEEEEEEVQDMDEDDRVVVEYRDDLQPFKQSRDRGTARRSSASGSDSDEMDYDLELKMISTPSPKKSMKMTMYADEVESQLKNIRNSMRADSIATSNVKNRIGSKGLSDKVVDVRLLLEEKRQNNNGLRQPNSTVKSDVRQRLGKRPHSPEVKPPSSISAPRREPISDVHSRLGIPKQDVKGLYSDTREKKSGNLWTRLGSAPKTQEKTSDKPENSVASPEEDDSELQRVWGALIKEKEESRQKKSRLDNLPSLQIEISRESSSGSDTES
SIO_010081: NCBP3
subclass of: SO_0000673
so part of: NCBP3
location: complement(join(662788..663023,663108..663272,664336..664493,665288..665573,666053..666159,666488..666587,667315..667423,668338..668411,670521..670649,672083..672208,673146..673251,673972..674037,675548..675613))
location: region:662788-675613:-1
so has part: feature:675548-675613:-1:exon
so has part: feature:673972-674037:-1:exon
so has part: feature:673146-673251:-1:exon
so has part: feature:672083-672208:-1:exon
so has part: feature:670521-670649:-1:exon
so has part: feature:668338-668411:-1:exon
so has part: feature:667315-667423:-1:exon
so has part: feature:666488-666587:-1:exon
so has part: feature:666053-666159:-1:exon
so has part: feature:665288-665573:-1:exon
so has part: feature:664336-664493:-1:exon
so has part: feature:663108-663272:-1:exon
so has part: feature:662788-663023:-1:exon

XP_010720193.2
type: Protein
SIO_000068: ncbiprotein

position:662788:-1
position: 662788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675613:-1
position: 675613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675548-675613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673972-674037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673146-673251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672083-672208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670521-670649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668338-668411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667315-667423:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666488-666587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666053-666159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665288-665573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:664336-664493:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:663108-663272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:662788-663023:-1:exon

NCBP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NCBP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear cap-binding protein subunit 3 isoform X1
translation: MEVEEGELETIPVRRSLRELIPVRDGQGERRRDRHLRGGRDTSRRYENKAGSFITGIDVTSKEAIEKKEQRAKRFHFRAEVNLAQRNVALDRDMMKKAIPKVRLDTIYICGVDEMSTQDIFAYFKEYPPAHIEWLDDTSCNVVWLDEVTATRALINMSSFPDQEKPKGRENNEEKTAEKTKKEKQEESTDDETEEGEVEDENPSDIELDALTQVEEDSLLRNDLRPANKLAKGNKLFMRFATKDDKKELGAARRSQYYMKYGNPNYGGMKGILSNSWKRRYHSRRIHRDVIKKRTFIGDDVGLTPPYKHRHSGLVNVPEEPIEEEEEEEEVQDMDEDDRVVVEYRDDLQPFKQSRDRGTARRSSASGSDSDEMDYDLELKMISTPSPKKSMKMTMYADEVESQLKNIRNSMRADSIATSNVKNRIGSKGLSDKVVDVRLLLEEKRQNNNGLRQPNSTVKSDVRQRLGKRPHSPEVKPPSSISAPRREPISDVHSRLGIPKQDVKGLYSDTREKKSGNLWTRLGSAPKTQEKTSDKPENSVASPEEDDSELQRVWGALIKEKEESRQKKSRLDNLPSLQIEISRESSSGSDTES
SIO_010081: NCBP3
subclass of: SO_0000673
so part of: NCBP3
location: complement(join(662788..663023,663108..663272,664336..664493,665288..665573,666053..666159,666488..666587,667315..667423,668338..668411,670521..670649,672083..672208,673146..673251,673972..674037,675494..675613))
location: region:662788-675613:-1
so has part: feature:675494-675613:-1:exon
so has part: feature:673972-674037:-1:exon
so has part: feature:673146-673251:-1:exon
so has part: feature:672083-672208:-1:exon
so has part: feature:670521-670649:-1:exon
so has part: feature:668338-668411:-1:exon
so has part: feature:667315-667423:-1:exon
so has part: feature:666488-666587:-1:exon
so has part: feature:666053-666159:-1:exon
so has part: feature:665288-665573:-1:exon
so has part: feature:664336-664493:-1:exon
so has part: feature:663108-663272:-1:exon
so has part: feature:662788-663023:-1:exon

XP_019477435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:675494-675613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:673972-674037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:673146-673251:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:672083-672208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:670521-670649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:668338-668411:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:667315-667423:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666488-666587:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:666053-666159:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:665288-665573:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:664336-664493:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:663108-663272:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:662788-663023:-1:exon

TMEM248
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TMEM248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 719928..734303
location: region:719928-734303:1
so has part: feature:719928-734303:1:exon
subclass of: SO_0000010

100547286
type: Gene
SIO_000068: ncbigene

position:719928:1
position: 719928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734303:1
position: 734303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719928-734303:1:exon

TMEM248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TMEM248
product: transmembrane protein 248, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019621891.2
SIO_010081: TMEM248
subclass of: SO_0000673
so part of: TMEM248
location: join(719928..720067,726687..726861,727507..727792,729110..729260,730038..730221,730679..730822,731574..734303)
location: region:719928-734303:1
so has part: feature:719928-720067:1:exon
so has part: feature:726687-726861:1:exon
so has part: feature:727507-727792:1:exon
so has part: feature:729110-729260:1:exon
so has part: feature:730038-730221:1:exon
so has part: feature:730679-730822:1:exon
so has part: feature:731574-734303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719928-720067:1:exon

position:720067:1
position: 720067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726687-726861:1:exon

position:726687:1
position: 726687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:726861:1
position: 726861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:727507-727792:1:exon

position:727507:1
position: 727507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727792:1
position: 727792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:729110-729260:1:exon

position:729110:1
position: 729110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729260:1
position: 729260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:730038-730221:1:exon

position:730038:1
position: 730038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730221:1
position: 730221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:730679-730822:1:exon

position:730679:1
position: 730679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730822:1
position: 730822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:731574-734303:1:exon

position:731574:1
position: 731574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TMEM248
product: transmembrane protein 248, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010721733.3
SIO_010081: TMEM248
subclass of: SO_0000673
so part of: TMEM248
location: join(720517..720535,726687..726861,727507..727792,729110..729260,730038..730221,730679..730822,731574..734303)
location: region:720517-734303:1
so has part: feature:720517-720535:1:exon
so has part: feature:726687-726861:1:exon
so has part: feature:727507-727792:1:exon
so has part: feature:729110-729260:1:exon
so has part: feature:730038-730221:1:exon
so has part: feature:730679-730822:1:exon
so has part: feature:731574-734303:1:exon

position:720517:1
position: 720517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:720517-720535:1:exon

position:720535:1
position: 720535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726687-726861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727507-727792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729110-729260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730038-730221:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:730679-730822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:731574-734303:1:exon

TMEM248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TMEM248
product: transmembrane protein 248, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 199 samples with support for all annotated introns
transcript id: XM_003211717.2
SIO_010081: TMEM248
subclass of: SO_0000673
so part of: TMEM248
location: join(724071..724232,726687..726861,727507..727792,729110..729260,730038..730221,730679..730822,731574..734303)
location: region:724071-734303:1
so has part: feature:724071-724232:1:exon
so has part: feature:726687-726861:1:exon
so has part: feature:727507-727792:1:exon
so has part: feature:729110-729260:1:exon
so has part: feature:730038-730221:1:exon
so has part: feature:730679-730822:1:exon
so has part: feature:731574-734303:1:exon

position:724071:1
position: 724071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724071-724232:1:exon

position:724232:1
position: 724232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:726687-726861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:727507-727792:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729110-729260:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730038-730221:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:730679-730822:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:731574-734303:1:exon

TMEM248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TMEM248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 248
translation: MFNINLLENLKVYISSRPPLVVFMISVSAMAIAFLTLGYFFKIKEIKSPEMTEDWNTFLLRFNDLDFCISENETLKHLINDTTTPESTVTSGQARSSTQSPQTLEDSGPINISVTITLTLDPLRPFGGYSRNITHLSSTIFGHQIGLSGRESHEEINITFTLPAAWNSDDCVLHGHCEQVVFTTCMTVTAASNVFPVTVQPPHCVPETYSNATLWYKIFTTARDSNTKYAQDYNPFWCYKGAIGKVYHALNPKLTVIVPDDDRSLINLHLMHTSYFLFVMVITMFCYAVIKGRPSKLRQSNTEFCSEKVALSEA
SIO_010081: TMEM248
subclass of: SO_0000673
so part of: TMEM248
location: join(726703..726861,727507..727792,729110..729260,730038..730221,730679..730822,731574..731594)
location: region:726703-731594:1
so has part: feature:726703-726861:1:exon
so has part: feature:727507-727792:1:exon
so has part: feature:729110-729260:1:exon
so has part: feature:730038-730221:1:exon
so has part: feature:730679-730822:1:exon
so has part: feature:731574-731594:1:exon

XP_019477436.1
type: Protein
SIO_000068: ncbiprotein

position:726703:1
position: 726703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:731594:1
position: 731594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726703-726861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727507-727792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729110-729260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730038-730221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730679-730822:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731574-731594:1:exon

TMEM248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TMEM248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 248
translation: MFNINLLENLKVYISSRPPLVVFMISVSAMAIAFLTLGYFFKIKEIKSPEMTEDWNTFLLRFNDLDFCISENETLKHLINDTTTPESTVTSGQARSSTQSPQTLEDSGPINISVTITLTLDPLRPFGGYSRNITHLSSTIFGHQIGLSGRESHEEINITFTLPAAWNSDDCVLHGHCEQVVFTTCMTVTAASNVFPVTVQPPHCVPETYSNATLWYKIFTTARDSNTKYAQDYNPFWCYKGAIGKVYHALNPKLTVIVPDDDRSLINLHLMHTSYFLFVMVITMFCYAVIKGRPSKLRQSNTEFCSEKVALSEA
SIO_010081: TMEM248
subclass of: SO_0000673
so part of: TMEM248
location: join(726703..726861,727507..727792,729110..729260,730038..730221,730679..730822,731574..731594)
location: region:726703-731594:1
so has part: feature:726703-726861:1:exon
so has part: feature:727507-727792:1:exon
so has part: feature:729110-729260:1:exon
so has part: feature:730038-730221:1:exon
so has part: feature:730679-730822:1:exon
so has part: feature:731574-731594:1:exon

XP_003211765.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:726703-726861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727507-727792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729110-729260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730038-730221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730679-730822:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731574-731594:1:exon

TMEM248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TMEM248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 248
translation: MFNINLLENLKVYISSRPPLVVFMISVSAMAIAFLTLGYFFKIKEIKSPEMTEDWNTFLLRFNDLDFCISENETLKHLINDTTTPESTVTSGQARSSTQSPQTLEDSGPINISVTITLTLDPLRPFGGYSRNITHLSSTIFGHQIGLSGRESHEEINITFTLPAAWNSDDCVLHGHCEQVVFTTCMTVTAASNVFPVTVQPPHCVPETYSNATLWYKIFTTARDSNTKYAQDYNPFWCYKGAIGKVYHALNPKLTVIVPDDDRSLINLHLMHTSYFLFVMVITMFCYAVIKGRPSKLRQSNTEFCSEKVALSEA
SIO_010081: TMEM248
subclass of: SO_0000673
so part of: TMEM248
location: join(726703..726861,727507..727792,729110..729260,730038..730221,730679..730822,731574..731594)
location: region:726703-731594:1
so has part: feature:726703-726861:1:exon
so has part: feature:727507-727792:1:exon
so has part: feature:729110-729260:1:exon
so has part: feature:730038-730221:1:exon
so has part: feature:730679-730822:1:exon
so has part: feature:731574-731594:1:exon

XP_010720035.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:726703-726861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:727507-727792:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729110-729260:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:730038-730221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730679-730822:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:731574-731594:1:exon

RABGEF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RABGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 756577..771201
location: region:756577-771201:1
so has part: feature:756577-771201:1:exon
subclass of: SO_0000010

100547133
type: Gene
SIO_000068: ncbigene

position:756577:1
position: 756577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771201:1
position: 771201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:756577-771201:1:exon

RABGEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RABGEF1
product: RAB guanine nucleotide exchange factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010721734.3
SIO_010081: RABGEF1
subclass of: SO_0000673
so part of: RABGEF1
location: join(756577..756683,757896..758081,759565..759731,760691..760810,763684..763853,765057..765138,765906..766038,766439..766530,766860..767116,768065..771201)
location: region:756577-771201:1
so has part: feature:756577-756683:1:exon
so has part: feature:757896-758081:1:exon
so has part: feature:759565-759731:1:exon
so has part: feature:760691-760810:1:exon
so has part: feature:763684-763853:1:exon
so has part: feature:765057-765138:1:exon
so has part: feature:765906-766038:1:exon
so has part: feature:766439-766530:1:exon
so has part: feature:766860-767116:1:exon
so has part: feature:768065-771201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:756577-756683:1:exon

position:756683:1
position: 756683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:757896-758081:1:exon

position:757896:1
position: 757896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758081:1
position: 758081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:759565-759731:1:exon

position:759565:1
position: 759565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759731:1
position: 759731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:760691-760810:1:exon

position:760691:1
position: 760691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760810:1
position: 760810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:763684-763853:1:exon

position:763684:1
position: 763684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763853:1
position: 763853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:765057-765138:1:exon

position:765057:1
position: 765057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765138:1
position: 765138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:765906-766038:1:exon

position:765906:1
position: 765906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766038:1
position: 766038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:766439-766530:1:exon

position:766439:1
position: 766439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766530:1
position: 766530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:766860-767116:1:exon

position:766860:1
position: 766860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:767116:1
position: 767116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:768065-771201:1:exon

position:768065:1
position: 768065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RABGEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RABGEF1
product: RAB guanine nucleotide exchange factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 154 samples with support for all annotated introns
transcript id: XM_031556402.1
SIO_010081: RABGEF1
subclass of: SO_0000673
so part of: RABGEF1
location: join(757896..758081,759565..759731,760691..760810,763687..763853,765057..765138,765906..766038,766439..766530,766860..767116,768065..771201)
location: region:757896-771201:1
so has part: feature:757896-758081:1:exon
so has part: feature:759565-759731:1:exon
so has part: feature:760691-760810:1:exon
so has part: feature:763687-763853:1:exon
so has part: feature:765057-765138:1:exon
so has part: feature:765906-766038:1:exon
so has part: feature:766439-766530:1:exon
so has part: feature:766860-767116:1:exon
so has part: feature:768065-771201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757896-758081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759565-759731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760691-760810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763687-763853:1:exon

position:763687:1
position: 763687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:765057-765138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765906-766038:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766439-766530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:766860-767116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768065-771201:1:exon

RABGEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RABGEF1
product: RAB guanine nucleotide exchange factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 217 samples with support for all annotated introns
transcript id: XM_010721735.2
SIO_010081: RABGEF1
subclass of: SO_0000673
so part of: RABGEF1
location: join(757896..758081,759565..759731,763684..763853,765057..765138,765906..766038,766439..766530,766860..767116,768065..771201)
location: region:757896-771201:1
so has part: feature:757896-758081:1:exon
so has part: feature:759565-759731:1:exon
so has part: feature:763684-763853:1:exon
so has part: feature:765057-765138:1:exon
so has part: feature:765906-766038:1:exon
so has part: feature:766439-766530:1:exon
so has part: feature:766860-767116:1:exon
so has part: feature:768065-771201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757896-758081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759565-759731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763684-763853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765057-765138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765906-766038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766439-766530:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766860-767116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768065-771201:1:exon

RABGEF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RABGEF1
product: RAB guanine nucleotide exchange factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003211716.3
SIO_010081: RABGEF1
subclass of: SO_0000673
so part of: RABGEF1
location: join(757896..758081,759565..759731,763687..763853,765057..765138,765906..766038,766439..766530,766860..767116,768065..771201)
location: region:757896-771201:1
so has part: feature:757896-758081:1:exon
so has part: feature:759565-759731:1:exon
so has part: feature:763687-763853:1:exon
so has part: feature:765057-765138:1:exon
so has part: feature:765906-766038:1:exon
so has part: feature:766439-766530:1:exon
so has part: feature:766860-767116:1:exon
so has part: feature:768065-771201:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757896-758081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759565-759731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763687-763853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765057-765138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765906-766038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766439-766530:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766860-767116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768065-771201:1:exon

RABGEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RABGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab5 GDP/GTP exchange factor isoform X2
translation: MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRTGAKKVAQEKVVKQGQLGRERNADNILRDLKEIFTPSWELASPTEAEIQEAKAPSPSINRQASIETDRVSKEFIEFLKTYHKPGQDIYKQCKLFLDTMNHKRDLSIEEQSECAQDFYQNVAEKLQTRWKAPPEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRFMTGQTSPKKQESDSWSPDVCLGVKQMYKNLDLLSQLNERQDRIVSEAKKLEKDLIDWTDGVAKEVQDIVEKYPLEIKPKNQALAAIDSENVENDKLPPPLQPQVYAG
SIO_010081: RABGEF1
subclass of: SO_0000673
so part of: RABGEF1
location: join(757903..758081,759565..759731,760691..760810,763684..763853,765057..765138,765906..766038,766439..766530,766860..767116,768065..768463)
location: region:757903-768463:1
so has part: feature:757903-758081:1:exon
so has part: feature:759565-759731:1:exon
so has part: feature:760691-760810:1:exon
so has part: feature:763684-763853:1:exon
so has part: feature:765057-765138:1:exon
so has part: feature:765906-766038:1:exon
so has part: feature:766439-766530:1:exon
so has part: feature:766860-767116:1:exon
so has part: feature:768065-768463:1:exon

XP_010720036.1
type: Protein
SIO_000068: ncbiprotein

position:757903:1
position: 757903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:768463:1
position: 768463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757903-758081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759565-759731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760691-760810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763684-763853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765057-765138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765906-766038:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766439-766530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:766860-767116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768065-768463:1:exon

RABGEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RABGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab5 GDP/GTP exchange factor isoform X1
translation: MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRTGAKKVAQEKVVKQGQLGRERNADNILRDLKEIFTPSWELASPTEEIQEAKAPSPSINRQASIETDRVSKEFIEFLKTYHKPGQDIYKQCKLFLDTMNHKRDLSIEEQSECAQDFYQNVAEKLQTRWKAPPEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRFMTGQTSPKKQESDSWSPDVCLGVKQMYKNLDLLSQLNERQDRIVSEAKKLEKDLIDWTDGVAKEVQDIVEKYPLEIKPKNQALAAIDSENVENDKLPPPLQPQVYAG
SIO_010081: RABGEF1
subclass of: SO_0000673
so part of: RABGEF1
location: join(757903..758081,759565..759731,760691..760810,763687..763853,765057..765138,765906..766038,766439..766530,766860..767116,768065..768463)
location: region:757903-768463:1
so has part: feature:757903-758081:1:exon
so has part: feature:759565-759731:1:exon
so has part: feature:760691-760810:1:exon
so has part: feature:763687-763853:1:exon
so has part: feature:765057-765138:1:exon
so has part: feature:765906-766038:1:exon
so has part: feature:766439-766530:1:exon
so has part: feature:766860-767116:1:exon
so has part: feature:768065-768463:1:exon

XP_031412262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:757903-758081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759565-759731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760691-760810:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:763687-763853:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765057-765138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:765906-766038:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766439-766530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:766860-767116:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:768065-768463:1:exon

RABGEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RABGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab5 GDP/GTP exchange factor isoform X3
translation: MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRTGAKKAEIQEAKAPSPSINRQASIETDRVSKEFIEFLKTYHKPGQDIYKQCKLFLDTMNHKRDLSIEEQSECAQDFYQNVAEKLQTRWKAPPEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRFMTGQTSPKKQESDSWSPDVCLGVKQMYKNLDLLSQLNERQDRIVSEAKKLEKDLIDWTDGVAKEVQDIVEKYPLEIKPKNQALAAIDSENVENDKLPPPLQPQVYAG
SIO_010081: RABGEF1
subclass of: SO_0000673
so part of: RABGEF1
location: join(757903..758081,759565..759731,763684..763853,765057..765138,765906..766038,766439..766530,766860..767116,768065..768463)
location: region:757903-768463:1
so has part: feature:757903-758081:1:exon
so has part: feature:759565-759731:1:exon
so has part: feature:763684-763853:1:exon
so has part: feature:765057-765138:1:exon
so has part: feature:765906-766038:1:exon
so has part: feature:766439-766530:1:exon
so has part: feature:766860-767116:1:exon
so has part: feature:768065-768463:1:exon

XP_010720037.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:757903-758081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759565-759731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763684-763853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765057-765138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765906-766038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766439-766530:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766860-767116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768065-768463:1:exon

RABGEF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RABGEF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab5 GDP/GTP exchange factor isoform X4
translation: MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAYASSQSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFTASSRTGAKKEIQEAKAPSPSINRQASIETDRVSKEFIEFLKTYHKPGQDIYKQCKLFLDTMNHKRDLSIEEQSECAQDFYQNVAEKLQTRWKAPPEKVEKAMDQIEKYIMTRQYKYVFCPETTDDEKKDLAVQKRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRFMTGQTSPKKQESDSWSPDVCLGVKQMYKNLDLLSQLNERQDRIVSEAKKLEKDLIDWTDGVAKEVQDIVEKYPLEIKPKNQALAAIDSENVENDKLPPPLQPQVYAG
SIO_010081: RABGEF1
subclass of: SO_0000673
so part of: RABGEF1
location: join(757903..758081,759565..759731,763687..763853,765057..765138,765906..766038,766439..766530,766860..767116,768065..768463)
location: region:757903-768463:1
so has part: feature:757903-758081:1:exon
so has part: feature:759565-759731:1:exon
so has part: feature:763687-763853:1:exon
so has part: feature:765057-765138:1:exon
so has part: feature:765906-766038:1:exon
so has part: feature:766439-766530:1:exon
so has part: feature:766860-767116:1:exon
so has part: feature:768065-768463:1:exon

XP_003211764.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:757903-758081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:759565-759731:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763687-763853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:765057-765138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:765906-766038:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:766439-766530:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:766860-767116:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:768065-768463:1:exon

KCTD7
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KCTD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 774114..780805
location: region:774114-780805:1
so has part: feature:774114-780805:1:exon
subclass of: SO_0000010

100546977
type: Gene
SIO_000068: ncbigene

position:774114:1
position: 774114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780805:1
position: 780805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774114-780805:1:exon

KCTD7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCTD7
product: potassium channel tetramerization domain containing 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 151 samples with support for all annotated introns
transcript id: XM_003211715.3
SIO_010081: KCTD7
subclass of: SO_0000673
so part of: KCTD7
location: join(774114..774331,775056..775225,776956..777134,777650..780805)
location: region:774114-780805:1
so has part: feature:774114-774331:1:exon
so has part: feature:775056-775225:1:exon
so has part: feature:776956-777134:1:exon
so has part: feature:777650-780805:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774114-774331:1:exon

position:774331:1
position: 774331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:775056-775225:1:exon

position:775056:1
position: 775056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:775225:1
position: 775225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:776956-777134:1:exon

position:776956:1
position: 776956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777134:1
position: 777134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777650-780805:1:exon

position:777650:1
position: 777650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCTD7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCTD7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD7
translation: MVVVTGQSKGSGDPDEAMSSSDAEDDFQEPATPTATQAGQALPLLPQQFPEVVPLNVGGTYFTTRLSTLRRYEDTMLAAMFSGRHYIPTDAEGRYFIDRDGTYFGDILNFLRSGDLPPRERVRSVYKEAQYYSIGPLLDHLEDVQPLKGEKVRQAFLGLMPYYKDHLERIIEIAKLRAVQRKARFAKLKVCVFKEEMPITPYECPHFNSLRFERSESEAKLFEHHCEVDVSFGPWEAVADVYDLLHCIVTDLSDRGITVDHQCIGVCDKHLINHYYCKRPIYEFKITWW
SIO_010081: KCTD7
subclass of: SO_0000673
so part of: KCTD7
location: join(774188..774331,775056..775225,776956..777134,777650..778026)
location: region:774188-778026:1
so has part: feature:774188-774331:1:exon
so has part: feature:775056-775225:1:exon
so has part: feature:776956-777134:1:exon
so has part: feature:777650-778026:1:exon

XP_003211763.1
type: Protein
SIO_000068: ncbiprotein

position:774188:1
position: 774188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778026:1
position: 778026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774188-774331:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775056-775225:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776956-777134:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777650-778026:1:exon

LOC100546824
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 788815..799989
location: region:788815-799989:1
so has part: feature:788815-799989:1:exon
subclass of: SO_0000011

100546824
type: Gene
SIO_000068: ncbigene

position:788815:1
position: 788815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799989:1
position: 799989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788815-799989:1:exon

LOC100546824
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC100546824
product: uncharacterized LOC100546824, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 193 samples with support for all annotated introns
transcript id: XR_795668.2
SIO_010081: LOC100546824
subclass of: SO_0000673
so part of: LOC100546824
location: join(788815..789041,796385..796435,797543..797618,798633..798680,799511..799989)
location: region:788815-799989:1
so has part: feature:788815-789041:1:exon
so has part: feature:796385-796435:1:exon
so has part: feature:797543-797618:1:exon
so has part: feature:798633-798680:1:exon
so has part: feature:799511-799989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788815-789041:1:exon

position:789041:1
position: 789041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796385-796435:1:exon

position:796385:1
position: 796385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796435:1
position: 796435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:797543-797618:1:exon

position:797543:1
position: 797543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797618:1
position: 797618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:798633-798680:1:exon

position:798633:1
position: 798633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798680:1
position: 798680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:799511-799989:1:exon

position:799511:1
position: 799511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100546824
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC100546824
product: uncharacterized LOC100546824, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XR_002120895.1
SIO_010081: LOC100546824
subclass of: SO_0000673
so part of: LOC100546824
location: join(788815..789041,796385..796435,798633..798680,799511..799989)
location: region:788815-799989:1
so has part: feature:788815-789041:1:exon
so has part: feature:796385-796435:1:exon
so has part: feature:798633-798680:1:exon
so has part: feature:799511-799989:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788815-789041:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:796385-796435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798633-798680:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:799511-799989:1:exon

TPST1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TPST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 806819..807787
location: region:806819-807787:1
so has part: feature:806819-807787:1:exon
subclass of: SO_0000010

104909262
type: Gene
SIO_000068: ncbigene

position:806819:1
position: 806819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807787:1
position: 807787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806819-807787:1:exon

TPST1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TPST1
product: tyrosylprotein sulfotransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010721737.3
SIO_010081: TPST1
subclass of: SO_0000673
so part of: TPST1
location: 806819..807787
location: region:806819-807787:1
so has part: feature:806819-807787:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806819-807787:1:exon

TPST1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TPST1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-tyrosine sulfotransferase 1
translation: MVGKLKQNLLLACLVISSVTVFYLGQHAMECHHRIEERSQPARPESLRSTARTASNGNTNKTFAYNKDMPLIFIGGVPRSGTTLMRAMLDAHPDIRCGEETRVIPRILAVKQMWARSSKEKIRLDEAGVTDEVLDSAMQAFLLEIIVKHGEPAPYLCNKDPFALKSLSYLARIFPNAKFLLMVRDGRASVHSMISRKVTIAGFDLNSYRDCLTKWNRAIETMYNQCMEVGFERCMLVHYEQLVLHPERWMRTLLKFLRIPWNQAVLHHEEMIGKAGGVSLSK
SIO_010081: TPST1
subclass of: SO_0000673
so part of: TPST1
location: 806919..807767
location: region:806919-807767:1
so has part: feature:806919-807767:1:exon

XP_010720039.1
type: Protein
SIO_000068: ncbiprotein

position:806919:1
position: 806919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807767:1
position: 807767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806919-807767:1:exon

LOC104913851
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913851
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(808993..811182)
location: region:808993-811182:-1
so has part: feature:808993-811182:-1:exon
subclass of: SO_0000011

104913851
type: Gene
SIO_000068: ncbigene

position:808993:-1
position: 808993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:811182:-1
position: 811182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808993-811182:-1:exon

LOC104913851
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913851
product: uncharacterized LOC104913851
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 153 samples with support for all annotated introns
transcript id: XR_795669.2
SIO_010081: LOC104913851
subclass of: SO_0000673
so part of: LOC104913851
location: complement(join(808993..809218,810927..810973,811071..811182))
location: region:808993-811182:-1
so has part: feature:811071-811182:-1:exon
so has part: feature:810927-810973:-1:exon
so has part: feature:808993-809218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:811071-811182:-1:exon

position:811071:-1
position: 811071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:810927-810973:-1:exon

position:810927:-1
position: 810927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:810973:-1
position: 810973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:808993-809218:-1:exon

position:809218:-1
position: 809218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217344
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 809242..814546
location: region:809242-814546:1
so has part: feature:809242-814546:1:exon
subclass of: SO_0000011

116217344
type: Gene
SIO_000068: ncbigene

position:809242:1
position: 809242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814546:1
position: 814546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809242-814546:1:exon

LOC116217344
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217344
product: uncharacterized LOC116217344, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_004161773.1
SIO_010081: LOC116217344
subclass of: SO_0000673
so part of: LOC116217344
location: join(809242..810247,811470..811536,811933..813316)
location: region:809242-813316:1
so has part: feature:809242-810247:1:exon
so has part: feature:811470-811536:1:exon
so has part: feature:811933-813316:1:exon

position:813316:1
position: 813316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809242-810247:1:exon

position:810247:1
position: 810247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:811470-811536:1:exon

position:811470:1
position: 811470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811536:1
position: 811536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:811933-813316:1:exon

position:811933:1
position: 811933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217344
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217344
product: uncharacterized LOC116217344, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_004161772.1
SIO_010081: LOC116217344
subclass of: SO_0000673
so part of: LOC116217344
location: join(809243..810247,811470..811536,813324..814546)
location: region:809243-814546:1
so has part: feature:809243-810247:1:exon
so has part: feature:811470-811536:1:exon
so has part: feature:813324-814546:1:exon

position:809243:1
position: 809243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:809243-810247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:811470-811536:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:813324-814546:1:exon

position:813324:1
position: 813324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100546521
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(814977..822060)
location: region:814977-822060:-1
so has part: feature:814977-822060:-1:exon
subclass of: SO_0000010

100546521
type: Gene
SIO_000068: ncbigene

position:814977:-1
position: 814977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822060:-1
position: 822060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814977-822060:-1:exon

LOC100546521
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546521
product: delta-1 crystallin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031556403.1
SIO_010081: LOC100546521
subclass of: SO_0000673
so part of: LOC100546521
location: complement(join(814977..815229,815725..815831,816204..816284,816555..816638,816809..816868,817048..817132,817713..817827,818041..818103,818417..818469,818614..818691,819002..819079,819429..819526,819791..819847,820165..820248,821177..822060))
location: region:814977-822060:-1
so has part: feature:821177-822060:-1:exon
so has part: feature:820165-820248:-1:exon
so has part: feature:819791-819847:-1:exon
so has part: feature:819429-819526:-1:exon
so has part: feature:819002-819079:-1:exon
so has part: feature:818614-818691:-1:exon
so has part: feature:818417-818469:-1:exon
so has part: feature:818041-818103:-1:exon
so has part: feature:817713-817827:-1:exon
so has part: feature:817048-817132:-1:exon
so has part: feature:816809-816868:-1:exon
so has part: feature:816555-816638:-1:exon
so has part: feature:816204-816284:-1:exon
so has part: feature:815725-815831:-1:exon
so has part: feature:814977-815229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:821177-822060:-1:exon

position:821177:-1
position: 821177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:820165-820248:-1:exon

position:820165:-1
position: 820165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820248:-1
position: 820248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:819791-819847:-1:exon

position:819791:-1
position: 819791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819847:-1
position: 819847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:819429-819526:-1:exon

position:819429:-1
position: 819429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819526:-1
position: 819526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:819002-819079:-1:exon

position:819002:-1
position: 819002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819079:-1
position: 819079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:818614-818691:-1:exon

position:818614:-1
position: 818614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818691:-1
position: 818691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:818417-818469:-1:exon

position:818417:-1
position: 818417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818469:-1
position: 818469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:818041-818103:-1:exon

position:818041:-1
position: 818041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:818103:-1
position: 818103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:817713-817827:-1:exon

position:817713:-1
position: 817713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817827:-1
position: 817827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:817048-817132:-1:exon

position:817048:-1
position: 817048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817132:-1
position: 817132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:816809-816868:-1:exon

position:816809:-1
position: 816809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816868:-1
position: 816868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:816555-816638:-1:exon

position:816555:-1
position: 816555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816638:-1
position: 816638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:816204-816284:-1:exon

position:816204:-1
position: 816204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:816284:-1
position: 816284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:815725-815831:-1:exon

position:815725:-1
position: 815725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:815831:-1
position: 815831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:814977-815229:-1:exon

position:815229:-1
position: 815229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100546521
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-1 crystallin
translation: MEILSSPISTEQRLSEVDIQASMAYAKALEKASILTKTELEKILSGLEKISEESSKGILVMTQSDEDIQTAIERRLKELIGDIAGKLQTGRSRNEQVVTDLKLLLKSSISVISTHLLQLIKTLVERAAIEIDVIMPGYTHLQKALPIRWSQFLLSHAVALTRDSERLGEVKKRITVLPLGSGVLAGNPLEIDRELLRSELDMTSITLNSIDAISERDFVVELISVATLLMIHLSKLAEDLIIFSTTEFGFVTLSDAYSTGSSLLPQKKNPDSLELIRSKAGRVFGRLAAILMVLKGIPSTFSKDLQEDKEAVLDVVDTLTAVLQVATGVISTLQINKENMEKALTPELLSTDLALYLVRKGMPIRQAQTASGKAVHLAETKGITINNLTLEDLKSISPLFASDVSQVFSVVNSVEQYTAVGGTAKSSVTAQIEQLRELLKKQKEQA
SIO_010081: LOC100546521
subclass of: SO_0000673
so part of: LOC100546521
location: complement(join(815079..815229,815725..815831,816204..816284,816555..816638,816809..816868,817048..817132,817713..817827,818041..818103,818417..818469,818614..818691,819002..819079,819429..819526,819791..819847,820165..820248,821177..821323))
location: region:815079-821323:-1
so has part: feature:821177-821323:-1:exon
so has part: feature:820165-820248:-1:exon
so has part: feature:819791-819847:-1:exon
so has part: feature:819429-819526:-1:exon
so has part: feature:819002-819079:-1:exon
so has part: feature:818614-818691:-1:exon
so has part: feature:818417-818469:-1:exon
so has part: feature:818041-818103:-1:exon
so has part: feature:817713-817827:-1:exon
so has part: feature:817048-817132:-1:exon
so has part: feature:816809-816868:-1:exon
so has part: feature:816555-816638:-1:exon
so has part: feature:816204-816284:-1:exon
so has part: feature:815725-815831:-1:exon
so has part: feature:815079-815229:-1:exon

XP_031412263.1
type: Protein
SIO_000068: ncbiprotein

position:815079:-1
position: 815079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821323:-1
position: 821323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821177-821323:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:820165-820248:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:819791-819847:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:819429-819526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:819002-819079:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:818614-818691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:818417-818469:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:818041-818103:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:817713-817827:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:817048-817132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:816809-816868:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:816555-816638:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:816204-816284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:815725-815831:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:815079-815229:-1:exon

CRCP
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CRCP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 818658..855588
location: region:818658-855588:1
so has part: feature:818658-855588:1:exon
subclass of: SO_0000010

100546672
type: Gene
SIO_000068: ncbigene

position:818658:1
position: 818658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855588:1
position: 855588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818658-855588:1:exon

CRCP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CRCP
product: CGRP receptor component, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031556404.1
SIO_010081: CRCP
subclass of: SO_0000673
so part of: CRCP
location: join(818658..818751,819228..819514,829507..829543,831707..831805,835293..835387,845589..845646,854043..855588)
location: region:818658-855588:1
so has part: feature:818658-818751:1:exon
so has part: feature:819228-819514:1:exon
so has part: feature:829507-829543:1:exon
so has part: feature:831707-831805:1:exon
so has part: feature:835293-835387:1:exon
so has part: feature:845589-845646:1:exon
so has part: feature:854043-855588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:818658-818751:1:exon

position:818751:1
position: 818751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:819228-819514:1:exon

position:819228:1
position: 819228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819514:1
position: 819514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:829507-829543:1:exon

position:829507:1
position: 829507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:829543:1
position: 829543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:831707-831805:1:exon

position:831707:1
position: 831707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:831805:1
position: 831805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:835293-835387:1:exon

position:835293:1
position: 835293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835387:1
position: 835387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:845589-845646:1:exon

position:845589:1
position: 845589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845646:1
position: 845646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:854043-855588:1:exon

position:854043:1
position: 854043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CRCP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CRCP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC9 isoform X1
translation: MTEMELFRSSFRKDANAALLSNFEVFQLLTDLKQQRKESGKSKQSSGQQNLNTIMYETLKYISKTPCRYQSPETVREFLVAMKGHKLTKAEKLQLLNHRPVTAVEIQLMVEESEERLTEEQIESLLQTVASILPGDPEEQQRDSAMETESRGGQ
SIO_010081: CRCP
subclass of: SO_0000673
so part of: CRCP
location: join(819480..819514,829507..829543,831707..831805,835293..835387,845589..845646,854043..854183)
location: region:819480-854183:1
so has part: feature:819480-819514:1:exon
so has part: feature:829507-829543:1:exon
so has part: feature:831707-831805:1:exon
so has part: feature:835293-835387:1:exon
so has part: feature:845589-845646:1:exon
so has part: feature:854043-854183:1:exon

XP_031412264.1
type: Protein
SIO_000068: ncbiprotein

position:819480:1
position: 819480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854183:1
position: 854183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819480-819514:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829507-829543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831707-831805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835293-835387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845589-845646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854043-854183:1:exon

TRNAG-GCC
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRNAG-GCC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 827408..827478
location: region:827408-827478:1
so has part: feature:827408-827478:1:exon
subclass of: SO_0000663

109370687
type: Gene
SIO_000068: ncbigene

position:827408:1
position: 827408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:827478:1
position: 827478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827408-827478:1:exon

TRNAG-GCC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
gene: TRNAG-GCC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon GCC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:827440..827442,aa:Gly,seq:gcc)
SIO_010081: TRNAG-GCC
subclass of: SO_0000673
so part of: TRNAG-GCC
location: 827408..827478
location: region:827408-827478:1
so has part: feature:827408-827478:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:827408-827478:1:exon

CRCP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CRCP
product: CGRP receptor component, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 184 samples with support for all annotated introns
transcript id: XM_003211713.4
SIO_010081: CRCP
subclass of: SO_0000673
so part of: CRCP
location: join(827626..827699,829507..829543,831707..831805,835293..835387,845589..845646,854043..855588)
location: region:827626-855588:1
so has part: feature:827626-827699:1:exon
so has part: feature:829507-829543:1:exon
so has part: feature:831707-831805:1:exon
so has part: feature:835293-835387:1:exon
so has part: feature:845589-845646:1:exon
so has part: feature:854043-855588:1:exon

position:827626:1
position: 827626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827626-827699:1:exon

position:827699:1
position: 827699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829507-829543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831707-831805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835293-835387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845589-845646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854043-855588:1:exon

CRCP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CRCP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC9 isoform X2
translation: MEVKDANAALLSNFEVFQLLTDLKQQRKESGKSKQSSGQQNLNTIMYETLKYISKTPCRYQSPETVREFLVAMKGHKLTKAEKLQLLNHRPVTAVEIQLMVEESEERLTEEQIESLLQTVASILPGDPEEQQRDSAMETESRGGQ
SIO_010081: CRCP
subclass of: SO_0000673
so part of: CRCP
location: join(827692..827699,829507..829543,831707..831805,835293..835387,845589..845646,854043..854183)
location: region:827692-854183:1
so has part: feature:827692-827699:1:exon
so has part: feature:829507-829543:1:exon
so has part: feature:831707-831805:1:exon
so has part: feature:835293-835387:1:exon
so has part: feature:845589-845646:1:exon
so has part: feature:854043-854183:1:exon

XP_003211761.1
type: Protein
SIO_000068: ncbiprotein

position:827692:1
position: 827692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827692-827699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:829507-829543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831707-831805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835293-835387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845589-845646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854043-854183:1:exon

CRCP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CRCP
product: CGRP receptor component, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_031556405.1
SIO_010081: CRCP
subclass of: SO_0000673
so part of: CRCP
location: join(827730..827919,829507..829543,831707..831805,835293..835387,845589..845646,854043..855588)
location: region:827730-855588:1
so has part: feature:827730-827919:1:exon
so has part: feature:829507-829543:1:exon
so has part: feature:831707-831805:1:exon
so has part: feature:835293-835387:1:exon
so has part: feature:845589-845646:1:exon
so has part: feature:854043-855588:1:exon

position:827730:1
position: 827730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:827730-827919:1:exon

position:827919:1
position: 827919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:829507-829543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:831707-831805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835293-835387:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:845589-845646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854043-855588:1:exon

CRCP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CRCP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-directed RNA polymerase III subunit RPC9 isoform X3
translation: MYETLKYISKTPCRYQSPETVREFLVAMKGHKLTKAEKLQLLNHRPVTAVEIQLMVEESEERLTEEQIESLLQTVASILPGDPEEQQRDSAMETESRGGQ
SIO_010081: CRCP
subclass of: SO_0000673
so part of: CRCP
location: join(831797..831805,835293..835387,845589..845646,854043..854183)
location: region:831797-854183:1
so has part: feature:831797-831805:1:exon
so has part: feature:835293-835387:1:exon
so has part: feature:845589-845646:1:exon
so has part: feature:854043-854183:1:exon

XP_031412265.1
type: Protein
SIO_000068: ncbiprotein

position:831797:1
position: 831797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831797-831805:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:835293-835387:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:845589-845646:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854043-854183:1:exon

LOC100546369
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(864046..870428)
location: region:864046-870428:-1
so has part: feature:864046-870428:-1:exon
subclass of: SO_0000010

100546369
type: Gene
SIO_000068: ncbigene

position:864046:-1
position: 864046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870428:-1
position: 870428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:864046-870428:-1:exon

LOC100546369
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546369
product: argininosuccinate lyase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010721892.2
SIO_010081: LOC100546369
subclass of: SO_0000673
so part of: LOC100546369
location: complement(join(864046..864279,864789..864895,865107..865187,865434..865517,865792..865851,865976..866060,866773..866887,867085..867147,867575..867627,868058..868135,868450..868527,868878..868975,869504..869560,869875..869958,870339..870428))
location: region:864046-870428:-1
so has part: feature:870339-870428:-1:exon
so has part: feature:869875-869958:-1:exon
so has part: feature:869504-869560:-1:exon
so has part: feature:868878-868975:-1:exon
so has part: feature:868450-868527:-1:exon
so has part: feature:868058-868135:-1:exon
so has part: feature:867575-867627:-1:exon
so has part: feature:867085-867147:-1:exon
so has part: feature:866773-866887:-1:exon
so has part: feature:865976-866060:-1:exon
so has part: feature:865792-865851:-1:exon
so has part: feature:865434-865517:-1:exon
so has part: feature:865107-865187:-1:exon
so has part: feature:864789-864895:-1:exon
so has part: feature:864046-864279:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:870339-870428:-1:exon

position:870339:-1
position: 870339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:869875-869958:-1:exon

position:869875:-1
position: 869875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869958:-1
position: 869958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:869504-869560:-1:exon

position:869504:-1
position: 869504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869560:-1
position: 869560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:868878-868975:-1:exon

position:868878:-1
position: 868878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868975:-1
position: 868975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:868450-868527:-1:exon

position:868450:-1
position: 868450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868527:-1
position: 868527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:868058-868135:-1:exon

position:868058:-1
position: 868058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868135:-1
position: 868135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:867575-867627:-1:exon

position:867575:-1
position: 867575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867627:-1
position: 867627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:867085-867147:-1:exon

position:867085:-1
position: 867085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867147:-1
position: 867147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:866773-866887:-1:exon

position:866773:-1
position: 866773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866887:-1
position: 866887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:865976-866060:-1:exon

position:865976:-1
position: 865976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:866060:-1
position: 866060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:865792-865851:-1:exon

position:865792:-1
position: 865792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865851:-1
position: 865851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:865434-865517:-1:exon

position:865434:-1
position: 865434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865517:-1
position: 865517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:865107-865187:-1:exon

position:865107:-1
position: 865107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:865187:-1
position: 865187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:864789-864895:-1:exon

position:864789:-1
position: 864789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864895:-1
position: 864895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:864046-864279:-1:exon

position:864279:-1
position: 864279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100546369
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546369
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: argininosuccinate lyase
translation: MLYPRESPSRELKELGGIWSFRADFSPGRDISEEWSKGVFVVKQSDEDIHTANERRLKELIGDIAGKLHTGRSRNDQVVTDLKLLLKSSISVISTHLLQLINTLVERAATEIDVIMPGYTHLQKALPIRWSQFLLSHAVALIRDSERLGEVKKRMNVLPLGSGALAGNPLEIDRELLRSELDFACISLNSMDAISERDFVVELLSVATLLMIHLSKLAEDLIIFSTTEFGFVTLSDAYSTGSSLMPQKKNPDSLELIRSKAGRVFGRLAAVLMVLKGLPSTYNKDLQEDKEAVFDVVDTLTAVLQVATGVISTLQINKENMEKALTPELLSTDLALYLVRKGMPFRQAHTASGKAVHLAETKGIAINKLTLEDLKSISPLFASDVSQVFNIVNSVEQYTAVGGTAKSSVTAQIEQLRELLKKQKEQA
SIO_010081: LOC100546369
subclass of: SO_0000673
so part of: LOC100546369
location: complement(join(864129..864279,864789..864895,865107..865187,865434..865517,865792..865851,865976..866060,866773..866887,867085..867147,867575..867627,868058..868135,868450..868527,868878..868975,869504..869560,869875..869958,870339..870428))
location: region:864129-870428:-1
so has part: feature:870339-870428:-1:exon
so has part: feature:869875-869958:-1:exon
so has part: feature:869504-869560:-1:exon
so has part: feature:868878-868975:-1:exon
so has part: feature:868450-868527:-1:exon
so has part: feature:868058-868135:-1:exon
so has part: feature:867575-867627:-1:exon
so has part: feature:867085-867147:-1:exon
so has part: feature:866773-866887:-1:exon
so has part: feature:865976-866060:-1:exon
so has part: feature:865792-865851:-1:exon
so has part: feature:865434-865517:-1:exon
so has part: feature:865107-865187:-1:exon
so has part: feature:864789-864895:-1:exon
so has part: feature:864129-864279:-1:exon

XP_010720194.1
type: Protein
SIO_000068: ncbiprotein

position:864129:-1
position: 864129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870339-870428:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:869875-869958:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:869504-869560:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:868878-868975:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:868450-868527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:868058-868135:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867575-867627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:867085-867147:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:866773-866887:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:865976-866060:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:865792-865851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:865434-865517:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:865107-865187:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:864789-864895:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:864129-864279:-1:exon

VKORC1L1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: VKORC1L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 870583..883363
location: region:870583-883363:1
so has part: feature:870583-883363:1:exon
subclass of: SO_0000010

100550207
type: Gene
SIO_000068: ncbigene

position:870583:1
position: 870583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883363:1
position: 883363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870583-883363:1:exon

VKORC1L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: VKORC1L1
product: vitamin K epoxide reductase complex subunit 1 like 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_003211735.4
SIO_010081: VKORC1L1
subclass of: SO_0000673
so part of: VKORC1L1
location: join(870583..870845,878534..878643,879301..883363)
location: region:870583-883363:1
so has part: feature:870583-870845:1:exon
so has part: feature:878534-878643:1:exon
so has part: feature:879301-883363:1:exon