Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 17, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 17, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015027.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015027.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000978.2.\nOn Dec 18, 2014 this sequence version replaced NC_015027.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 13065498
topology: linear
so has quality: SO_0000987
location: 1..13065498
location: region:1-13065498:1
RO_0002162: 9103

NC_015027
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13065498:1
position: 13065498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-13065498:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 17
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 541..640
location: region:541-640:1
so has part: feature:541-640:1:region

position:541:1
position: 541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640:1
position: 640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541-640:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1128..1227
location: region:1128-1227:1
so has part: feature:1128-1227:1:region

position:1128:1
position: 1128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1227:1
position: 1227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1128-1227:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 25180..25279
location: region:25180-25279:1
so has part: feature:25180-25279:1:region

position:25180:1
position: 25180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25279:1
position: 25279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25180-25279:1:region

SLC25A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC25A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(57002..>66943)
location: region:57002-66943:-1
so has part: feature:57002-66943:-1:exon
subclass of: SO_0000010

100543067
type: Gene
SIO_000068: ncbigene

position:57002:-1
position: 57002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66943:-1
position: 66943
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:57002-66943:-1:exon

SLC25A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC25A1
product: solute carrier family 25 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010720224.2
SIO_010081: SLC25A1
subclass of: SO_0000673
so part of: SLC25A1
location: complement(join(57002..58818,59843..59916,60028..60143,60324..60428,60594..60678,60774..60912,61034..61133,61227..61334,66880..>66943))
location: region:57002-66943:-1
so has part: feature:66880-66943:-1:exon
so has part: feature:61227-61334:-1:exon
so has part: feature:61034-61133:-1:exon
so has part: feature:60774-60912:-1:exon
so has part: feature:60594-60678:-1:exon
so has part: feature:60324-60428:-1:exon
so has part: feature:60028-60143:-1:exon
so has part: feature:59843-59916:-1:exon
so has part: feature:57002-58818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66880-66943:-1:exon

position:66880:-1
position: 66880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61227-61334:-1:exon

position:61227:-1
position: 61227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61334:-1
position: 61334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:61034-61133:-1:exon

position:61034:-1
position: 61034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61133:-1
position: 61133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:60774-60912:-1:exon

position:60774:-1
position: 60774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60912:-1
position: 60912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:60594-60678:-1:exon

position:60594:-1
position: 60594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60678:-1
position: 60678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:60324-60428:-1:exon

position:60324:-1
position: 60324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60428:-1
position: 60428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:60028-60143:-1:exon

position:60028:-1
position: 60028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60143:-1
position: 60143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:59843-59916:-1:exon

position:59843:-1
position: 59843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59916:-1
position: 59916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:57002-58818:-1:exon

position:58818:-1
position: 58818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC25A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tricarboxylate transport protein, mitochondrial
translation: LAAAAPAGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDEKANPPRYKGIGDCVKQTVRDHGVRGLYRGLSSLVYGSIPKAAVRFGMFEFLSNQMRDEQGRLDSTRGLVCGLGAGVAEAVMVVCPMETIKVKFIHDQCSSKPKYRGFFHGVREIVREQGLKGTYQGLTATVLKQGSNQAIRFFVMTSLKNWYKGDDPNKVINPFVTGIFGALAGAASVFGNTPLDVVKTRMQGLEAHKYKSTWDCAYQIMKYEGPLAFYKGTIPRLGRVCLDVAIVFVIYDEVVKFLNKVWKTD
SIO_010081: SLC25A1
subclass of: SO_0000673
so part of: SLC25A1
location: complement(join(58704..58818,59843..59916,60028..60143,60324..60428,60594..60678,60774..60912,61034..61133,61227..61334,66880..>66943))
location: region:58704-66943:-1
so has part: feature:66880-66943:-1:exon
so has part: feature:61227-61334:-1:exon
so has part: feature:61034-61133:-1:exon
so has part: feature:60774-60912:-1:exon
so has part: feature:60594-60678:-1:exon
so has part: feature:60324-60428:-1:exon
so has part: feature:60028-60143:-1:exon
so has part: feature:59843-59916:-1:exon
so has part: feature:58704-58818:-1:exon

XP_010718526.1
type: Protein
SIO_000068: ncbiprotein

position:58704:-1
position: 58704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66880-66943:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61227-61334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:61034-61133:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:60774-60912:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:60594-60678:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:60324-60428:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:60028-60143:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:59843-59916:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:58704-58818:-1:exon

LOC116217280
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217280
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(59694..59805)
location: region:59694-59805:-1
so has part: feature:59694-59805:-1:exon
subclass of: SO_0000623

116217280
type: Gene
SIO_000068: ncbigene

position:59694:-1
position: 59694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59805:-1
position: 59805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:59694-59805:-1:exon

LOC116217280
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snRNA
gene: LOC116217280
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161629.1
SIO_010081: LOC116217280
subclass of: SO_0000673
so part of: LOC116217280
location: complement(59694..59805)
location: region:59694-59805:-1
so has part: feature:59694-59805:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:59694-59805:-1:exon

LOC100542338
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100542338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(73480..114504)
location: region:73480-114504:-1
so has part: feature:73480-114504:-1:exon
subclass of: SO_0000010

100542338
type: Gene
SIO_000068: ncbigene

position:73480:-1
position: 73480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114504:-1
position: 114504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73480-114504:-1:exon

LOC100542338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100542338
product: clathrin heavy chain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_010719946.3
SIO_010081: LOC100542338
subclass of: SO_0000673
so part of: LOC100542338
location: complement(join(73480..74798,75317..75364,75794..75869,78986..79006,79689..79910,80357..80527,80950..81060,81381..81512,82453..82602,82709..82876,83214..83321,83734..83898,83991..84148,84583..84775,85329..85512,85901..86046,86405..86527,88359..88593,89110..89252,89924..90049,91041..91204,91519..91699,92117..92281,92513..92650,93410..93532,94129..94281,94403..94603,95011..95208,95518..95691,97019..97132,97926..98087,98368..98636,103765..103972,113751..114504))
location: region:73480-114504:-1
so has part: feature:113751-114504:-1:exon
so has part: feature:103765-103972:-1:exon
so has part: feature:98368-98636:-1:exon
so has part: feature:97926-98087:-1:exon
so has part: feature:97019-97132:-1:exon
so has part: feature:95518-95691:-1:exon
so has part: feature:95011-95208:-1:exon
so has part: feature:94403-94603:-1:exon
so has part: feature:94129-94281:-1:exon
so has part: feature:93410-93532:-1:exon
so has part: feature:92513-92650:-1:exon
so has part: feature:92117-92281:-1:exon
so has part: feature:91519-91699:-1:exon
so has part: feature:91041-91204:-1:exon
so has part: feature:89924-90049:-1:exon
so has part: feature:89110-89252:-1:exon
so has part: feature:88359-88593:-1:exon
so has part: feature:86405-86527:-1:exon
so has part: feature:85901-86046:-1:exon
so has part: feature:85329-85512:-1:exon
so has part: feature:84583-84775:-1:exon
so has part: feature:83991-84148:-1:exon
so has part: feature:83734-83898:-1:exon
so has part: feature:83214-83321:-1:exon
so has part: feature:82709-82876:-1:exon
so has part: feature:82453-82602:-1:exon
so has part: feature:81381-81512:-1:exon
so has part: feature:80950-81060:-1:exon
so has part: feature:80357-80527:-1:exon
so has part: feature:79689-79910:-1:exon
so has part: feature:78986-79006:-1:exon
so has part: feature:75794-75869:-1:exon
so has part: feature:75317-75364:-1:exon
so has part: feature:73480-74798:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113751-114504:-1:exon

position:113751:-1
position: 113751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103765-103972:-1:exon

position:103765:-1
position: 103765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103972:-1
position: 103972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98368-98636:-1:exon

position:98368:-1
position: 98368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98636:-1
position: 98636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:97926-98087:-1:exon

position:97926:-1
position: 97926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98087:-1
position: 98087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:97019-97132:-1:exon

position:97019:-1
position: 97019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97132:-1
position: 97132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:95518-95691:-1:exon

position:95518:-1
position: 95518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95691:-1
position: 95691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:95011-95208:-1:exon

position:95011:-1
position: 95011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95208:-1
position: 95208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:94403-94603:-1:exon

position:94403:-1
position: 94403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94603:-1
position: 94603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:94129-94281:-1:exon

position:94129:-1
position: 94129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94281:-1
position: 94281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:93410-93532:-1:exon

position:93410:-1
position: 93410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:93532:-1
position: 93532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:92513-92650:-1:exon

position:92513:-1
position: 92513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92650:-1
position: 92650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:92117-92281:-1:exon

position:92117:-1
position: 92117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:92281:-1
position: 92281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:91519-91699:-1:exon

position:91519:-1
position: 91519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91699:-1
position: 91699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:91041-91204:-1:exon

position:91041:-1
position: 91041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91204:-1
position: 91204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:89924-90049:-1:exon

position:89924:-1
position: 89924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90049:-1
position: 90049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:89110-89252:-1:exon

position:89110:-1
position: 89110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:89252:-1
position: 89252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:88359-88593:-1:exon

position:88359:-1
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LOC100542338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100542338
product: clathrin heavy chain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010719947.3
SIO_010081: LOC100542338
subclass of: SO_0000673
so part of: LOC100542338
location: complement(join(73480..74798,75317..75364,75794..75869,79689..79910,80357..80527,80950..81060,81381..81512,82453..82602,82709..82876,83214..83321,83734..83898,83991..84148,84583..84775,85329..85512,85901..86046,86405..86527,88359..88593,89110..89252,89924..90049,91041..91204,91519..91699,92117..92281,92513..92650,93410..93532,94129..94281,94403..94603,95011..95208,95518..95691,97019..97132,97926..98087,98368..98636,103765..103972,113751..114501))
location: region:73480-114501:-1
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SIO_000628: feature:73480-74798:-1:exon

LOC100542338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100542338
product: clathrin heavy chain 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_010719948.3
SIO_010081: LOC100542338
subclass of: SO_0000673
so part of: LOC100542338
location: complement(join(73480..74798,75794..75869,78986..79006,79689..79910,80357..80527,80950..81060,81381..81512,82453..82602,82709..82876,83214..83321,83734..83898,83991..84148,84583..84775,85329..85512,85901..86046,86405..86527,88359..88593,89110..89252,89924..90049,91041..91204,91519..91699,92117..92281,92513..92650,93410..93532,94129..94281,94403..94603,95011..95208,95518..95691,97019..97132,97926..98087,98368..98636,103765..103972,113751..114499))
location: region:73480-114499:-1
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position:114499:-1
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reference: sequence
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urn:…
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LOC100542338
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100542338
product: clathrin heavy chain 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 193 samples with support for all annotated introns
transcript id: XM_003210844.4
SIO_010081: LOC100542338
subclass of: SO_0000673
so part of: LOC100542338
location: complement(join(73480..74798,75794..75869,79689..79910,80357..80527,80950..81060,81381..81512,82453..82602,82709..82876,83214..83321,83734..83898,83991..84148,84583..84775,85329..85512,85901..86046,86405..86527,88359..88593,89110..89252,89924..90049,91041..91204,91519..91699,92117..92281,92513..92650,93410..93532,94129..94281,94403..94603,95011..95208,95518..95691,97019..97132,97926..98087,98368..98636,103765..103972,113751..114495))
location: region:73480-114495:-1
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urn:…
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urn:…
SIO_000300: 28
SIO_000628: feature:80950-81060:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:80357-80527:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:79689-79910:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:75794-75869:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:73480-74798:-1:exon

LOC100542338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100542338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clathrin heavy chain 1 isoform X4
translation: MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTSPIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHAMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHVYDLESGVCIYMNRISADTIFVTASHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGHASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKNLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVETELIFAFAKTNRLSELEEFISGPNNAHIQQVGDRCYEEDMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFACVDGREFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTQEEDYQGLRASIDAYDNFDNIALAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKKDHLYKDAMQYAAESKDVELAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFVQVMREYLTKVDNLDASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQTNFPYGYTAPGFTQPPVYGFNM
SIO_010081: LOC100542338
subclass of: SO_0000673
so part of: LOC100542338
location: complement(join(74683..74798,75794..75869,79689..79910,80357..80527,80950..81060,81381..81512,82453..82602,82709..82876,83214..83321,83734..83898,83991..84148,84583..84775,85329..85512,85901..86046,86405..86527,88359..88593,89110..89252,89924..90049,91041..91204,91519..91699,92117..92281,92513..92650,93410..93532,94129..94281,94403..94603,95011..95208,95518..95691,97019..97132,97926..98087,98368..98636,103765..103972,113751..113792))
location: region:74683-113792:-1
so has part: feature:113751-113792:-1:exon
so has part: feature:103765-103972:-1:exon
so has part: feature:98368-98636:-1:exon
so has part: feature:97926-98087:-1:exon
so has part: feature:97019-97132:-1:exon
so has part: feature:95518-95691:-1:exon
so has part: feature:95011-95208:-1:exon
so has part: feature:94403-94603:-1:exon
so has part: feature:94129-94281:-1:exon
so has part: feature:93410-93532:-1:exon
so has part: feature:92513-92650:-1:exon
so has part: feature:92117-92281:-1:exon
so has part: feature:91519-91699:-1:exon
so has part: feature:91041-91204:-1:exon
so has part: feature:89924-90049:-1:exon
so has part: feature:89110-89252:-1:exon
so has part: feature:88359-88593:-1:exon
so has part: feature:86405-86527:-1:exon
so has part: feature:85901-86046:-1:exon
so has part: feature:85329-85512:-1:exon
so has part: feature:84583-84775:-1:exon
so has part: feature:83991-84148:-1:exon
so has part: feature:83734-83898:-1:exon
so has part: feature:83214-83321:-1:exon
so has part: feature:82709-82876:-1:exon
so has part: feature:82453-82602:-1:exon
so has part: feature:81381-81512:-1:exon
so has part: feature:80950-81060:-1:exon
so has part: feature:80357-80527:-1:exon
so has part: feature:79689-79910:-1:exon
so has part: feature:75794-75869:-1:exon
so has part: feature:74683-74798:-1:exon

XP_003210892.1
type: Protein
SIO_000068: ncbiprotein

position:74683:-1
position: 74683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113792:-1
position: 113792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113751-113792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103765-103972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98368-98636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97926-98087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97019-97132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95518-95691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95011-95208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94403-94603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94129-94281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:93410-93532:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92513-92650:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92117-92281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91519-91699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91041-91204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:89924-90049:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:89110-89252:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:88359-88593:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86405-86527:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:85901-86046:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:85329-85512:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:84583-84775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:83991-84148:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:83734-83898:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:83214-83321:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:82709-82876:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:82453-82602:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:81381-81512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:80950-81060:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:80357-80527:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:79689-79910:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:75794-75869:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:74683-74798:-1:exon

LOC100542338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100542338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clathrin heavy chain 2 isoform X2
translation: MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTSPIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHAMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHVYDLESGVCIYMNRISADTIFVTASHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGHASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKNLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVETELIFAFAKTNRLSELEEFISGPNNAHIQQVGDRCYEEDMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFACVDGREFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTQEEDYQGLRASIDAYDNFDNIALAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKKDHLYKDAMQYAAESKDVELAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFVQVMREYLTKVDNLDASESLRKEEEQVTEPTPIVFEALLKRRSANKRLEVAGQQLMLTAGPSAVPPQTNFPYGYTAPGFTQPPVYGFNM
SIO_010081: LOC100542338
subclass of: SO_0000673
so part of: LOC100542338
location: complement(join(74683..74798,75317..75364,75794..75869,79689..79910,80357..80527,80950..81060,81381..81512,82453..82602,82709..82876,83214..83321,83734..83898,83991..84148,84583..84775,85329..85512,85901..86046,86405..86527,88359..88593,89110..89252,89924..90049,91041..91204,91519..91699,92117..92281,92513..92650,93410..93532,94129..94281,94403..94603,95011..95208,95518..95691,97019..97132,97926..98087,98368..98636,103765..103972,113751..113792))
location: region:74683-113792:-1
so has part: feature:113751-113792:-1:exon
so has part: feature:103765-103972:-1:exon
so has part: feature:98368-98636:-1:exon
so has part: feature:97926-98087:-1:exon
so has part: feature:97019-97132:-1:exon
so has part: feature:95518-95691:-1:exon
so has part: feature:95011-95208:-1:exon
so has part: feature:94403-94603:-1:exon
so has part: feature:94129-94281:-1:exon
so has part: feature:93410-93532:-1:exon
so has part: feature:92513-92650:-1:exon
so has part: feature:92117-92281:-1:exon
so has part: feature:91519-91699:-1:exon
so has part: feature:91041-91204:-1:exon
so has part: feature:89924-90049:-1:exon
so has part: feature:89110-89252:-1:exon
so has part: feature:88359-88593:-1:exon
so has part: feature:86405-86527:-1:exon
so has part: feature:85901-86046:-1:exon
so has part: feature:85329-85512:-1:exon
so has part: feature:84583-84775:-1:exon
so has part: feature:83991-84148:-1:exon
so has part: feature:83734-83898:-1:exon
so has part: feature:83214-83321:-1:exon
so has part: feature:82709-82876:-1:exon
so has part: feature:82453-82602:-1:exon
so has part: feature:81381-81512:-1:exon
so has part: feature:80950-81060:-1:exon
so has part: feature:80357-80527:-1:exon
so has part: feature:79689-79910:-1:exon
so has part: feature:75794-75869:-1:exon
so has part: feature:75317-75364:-1:exon
so has part: feature:74683-74798:-1:exon

XP_010718249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113751-113792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103765-103972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98368-98636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97926-98087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97019-97132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95518-95691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95011-95208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94403-94603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94129-94281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:93410-93532:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92513-92650:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92117-92281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91519-91699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91041-91204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:89924-90049:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:89110-89252:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:88359-88593:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86405-86527:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:85901-86046:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:85329-85512:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:84583-84775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:83991-84148:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:83734-83898:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:83214-83321:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:82709-82876:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:82453-82602:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:81381-81512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:80950-81060:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:80357-80527:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:79689-79910:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:75794-75869:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:75317-75364:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:74683-74798:-1:exon

LOC100542338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100542338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clathrin heavy chain 2 isoform X3
translation: MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTSPIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHAMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHVYDLESGVCIYMNRISADTIFVTASHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGHASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKNLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVETELIFAFAKTNRLSELEEFISGPNNAHIQQVGDRCYEEDMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFACVDGREFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTQEEDYQGLRASIDAYDNFDNIALAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKKDHLYKDAMQYAAESKDVELAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFVQVMREYLTKVDGLFYKVDNLDASESLRKEEEQVTEPTPIVFGQQLMLTAGPSAVPPQTNFPYGYTAPGFTQPPVYGFNM
SIO_010081: LOC100542338
subclass of: SO_0000673
so part of: LOC100542338
location: complement(join(74683..74798,75794..75869,78986..79006,79689..79910,80357..80527,80950..81060,81381..81512,82453..82602,82709..82876,83214..83321,83734..83898,83991..84148,84583..84775,85329..85512,85901..86046,86405..86527,88359..88593,89110..89252,89924..90049,91041..91204,91519..91699,92117..92281,92513..92650,93410..93532,94129..94281,94403..94603,95011..95208,95518..95691,97019..97132,97926..98087,98368..98636,103765..103972,113751..113792))
location: region:74683-113792:-1
so has part: feature:113751-113792:-1:exon
so has part: feature:103765-103972:-1:exon
so has part: feature:98368-98636:-1:exon
so has part: feature:97926-98087:-1:exon
so has part: feature:97019-97132:-1:exon
so has part: feature:95518-95691:-1:exon
so has part: feature:95011-95208:-1:exon
so has part: feature:94403-94603:-1:exon
so has part: feature:94129-94281:-1:exon
so has part: feature:93410-93532:-1:exon
so has part: feature:92513-92650:-1:exon
so has part: feature:92117-92281:-1:exon
so has part: feature:91519-91699:-1:exon
so has part: feature:91041-91204:-1:exon
so has part: feature:89924-90049:-1:exon
so has part: feature:89110-89252:-1:exon
so has part: feature:88359-88593:-1:exon
so has part: feature:86405-86527:-1:exon
so has part: feature:85901-86046:-1:exon
so has part: feature:85329-85512:-1:exon
so has part: feature:84583-84775:-1:exon
so has part: feature:83991-84148:-1:exon
so has part: feature:83734-83898:-1:exon
so has part: feature:83214-83321:-1:exon
so has part: feature:82709-82876:-1:exon
so has part: feature:82453-82602:-1:exon
so has part: feature:81381-81512:-1:exon
so has part: feature:80950-81060:-1:exon
so has part: feature:80357-80527:-1:exon
so has part: feature:79689-79910:-1:exon
so has part: feature:78986-79006:-1:exon
so has part: feature:75794-75869:-1:exon
so has part: feature:74683-74798:-1:exon

XP_010718250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113751-113792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103765-103972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98368-98636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97926-98087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97019-97132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95518-95691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95011-95208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94403-94603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94129-94281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:93410-93532:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92513-92650:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92117-92281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91519-91699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91041-91204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:89924-90049:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:89110-89252:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:88359-88593:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86405-86527:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:85901-86046:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:85329-85512:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:84583-84775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:83991-84148:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:83734-83898:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:83214-83321:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:82709-82876:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:82453-82602:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:81381-81512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:80950-81060:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:80357-80527:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:79689-79910:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:78986-79006:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:75794-75869:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:74683-74798:-1:exon

LOC100542338
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100542338
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: clathrin heavy chain 2 isoform X1
translation: MAQILPIRFQEHFQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPTSPIRRPISAESAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHAMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAGCQIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNAKPSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGIKHGVIYLITKYGYIHVYDLESGVCIYMNRISADTIFVTASHEPTSGIIGVNKKGQVLSVCVEEDNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKGILRTSDTIRKFQSVPAQPGHASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRESNCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRIPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQKNLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVETELIFAFAKTNRLSELEEFISGPNNAHIQQVGDRCYEEDMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSGRKANSTRTWKEVCFACVDGREFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQFYLDYKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTQEEDYQGLRASIDAYDNFDNIALAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKKDHLYKDAMQYAAESKDVELAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHNIMDFAMPYFVQVMREYLTKVDGLFYKVDNLDASESLRKEEEQVTEPTPIVFEALLKRRSANKRLEVAGQQLMLTAGPSAVPPQTNFPYGYTAPGFTQPPVYGFNM
SIO_010081: LOC100542338
subclass of: SO_0000673
so part of: LOC100542338
location: complement(join(74683..74798,75317..75364,75794..75869,78986..79006,79689..79910,80357..80527,80950..81060,81381..81512,82453..82602,82709..82876,83214..83321,83734..83898,83991..84148,84583..84775,85329..85512,85901..86046,86405..86527,88359..88593,89110..89252,89924..90049,91041..91204,91519..91699,92117..92281,92513..92650,93410..93532,94129..94281,94403..94603,95011..95208,95518..95691,97019..97132,97926..98087,98368..98636,103765..103972,113751..113792))
location: region:74683-113792:-1
so has part: feature:113751-113792:-1:exon
so has part: feature:103765-103972:-1:exon
so has part: feature:98368-98636:-1:exon
so has part: feature:97926-98087:-1:exon
so has part: feature:97019-97132:-1:exon
so has part: feature:95518-95691:-1:exon
so has part: feature:95011-95208:-1:exon
so has part: feature:94403-94603:-1:exon
so has part: feature:94129-94281:-1:exon
so has part: feature:93410-93532:-1:exon
so has part: feature:92513-92650:-1:exon
so has part: feature:92117-92281:-1:exon
so has part: feature:91519-91699:-1:exon
so has part: feature:91041-91204:-1:exon
so has part: feature:89924-90049:-1:exon
so has part: feature:89110-89252:-1:exon
so has part: feature:88359-88593:-1:exon
so has part: feature:86405-86527:-1:exon
so has part: feature:85901-86046:-1:exon
so has part: feature:85329-85512:-1:exon
so has part: feature:84583-84775:-1:exon
so has part: feature:83991-84148:-1:exon
so has part: feature:83734-83898:-1:exon
so has part: feature:83214-83321:-1:exon
so has part: feature:82709-82876:-1:exon
so has part: feature:82453-82602:-1:exon
so has part: feature:81381-81512:-1:exon
so has part: feature:80950-81060:-1:exon
so has part: feature:80357-80527:-1:exon
so has part: feature:79689-79910:-1:exon
so has part: feature:78986-79006:-1:exon
so has part: feature:75794-75869:-1:exon
so has part: feature:75317-75364:-1:exon
so has part: feature:74683-74798:-1:exon

XP_010718248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:113751-113792:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:103765-103972:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98368-98636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:97926-98087:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:97019-97132:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95518-95691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95011-95208:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:94403-94603:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:94129-94281:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:93410-93532:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92513-92650:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92117-92281:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:91519-91699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:91041-91204:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:89924-90049:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:89110-89252:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:88359-88593:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:86405-86527:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:85901-86046:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:85329-85512:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:84583-84775:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:83991-84148:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:83734-83898:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:83214-83321:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:82709-82876:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:82453-82602:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:81381-81512:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:80950-81060:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:80357-80527:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:79689-79910:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:78986-79006:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:75794-75869:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:75317-75364:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:74683-74798:-1:exon

SNAP29
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SNAP29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(125642..134833)
location: region:125642-134833:-1
so has part: feature:125642-134833:-1:exon
subclass of: SO_0000010

100543222
type: Gene
SIO_000068: ncbigene

position:125642:-1
position: 125642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:134833:-1
position: 134833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125642-134833:-1:exon

SNAP29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SNAP29
product: synaptosome associated protein 29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010719950.2
SIO_010081: SNAP29
subclass of: SO_0000673
so part of: SNAP29
location: complement(join(125642..130201,131603..131707,132245..132330,133309..133505,134764..134833))
location: region:125642-134833:-1
so has part: feature:134764-134833:-1:exon
so has part: feature:133309-133505:-1:exon
so has part: feature:132245-132330:-1:exon
so has part: feature:131603-131707:-1:exon
so has part: feature:125642-130201:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134764-134833:-1:exon

position:134764:-1
position: 134764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:133309-133505:-1:exon

position:133309:-1
position: 133309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133505:-1
position: 133505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:132245-132330:-1:exon

position:132245:-1
position: 132245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132330:-1
position: 132330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:131603-131707:-1:exon

position:131603:-1
position: 131603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:131707:-1
position: 131707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:125642-130201:-1:exon

position:130201:-1
position: 130201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNAP29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SNAP29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptosomal-associated protein 29
translation: MVDKMDQDLKTSQRHINSIKSVFGGLVNYFKAKPPENKPEQNGMPEYYGSNRLKEAMMSSKDQDPKYQESHPNLRRLDNSDSDFSSIDSISSVQRDAYPKNQCLQAYHKKIDNNLDEMSSGLSRLKNLALGLQTEIEEQDDMLDRLTKKVEILDIGIKSTDKKIRQL
SIO_010081: SNAP29
subclass of: SO_0000673
so part of: SNAP29
location: complement(join(130044..130201,131603..131707,132245..132330,133309..133463))
location: region:130044-133463:-1
so has part: feature:133309-133463:-1:exon
so has part: feature:132245-132330:-1:exon
so has part: feature:131603-131707:-1:exon
so has part: feature:130044-130201:-1:exon

XP_010718252.1
type: Protein
SIO_000068: ncbiprotein

position:130044:-1
position: 130044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133463:-1
position: 133463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:133309-133463:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132245-132330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:131603-131707:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:130044-130201:-1:exon

PI4KA
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PI4KA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 134946..191780
location: region:134946-191780:1
so has part: feature:134946-191780:1:exon
subclass of: SO_0000010

100542492
type: Gene
SIO_000068: ncbigene

position:134946:1
position: 134946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191780:1
position: 191780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134946-191780:1:exon

PI4KA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PI4KA
product: phosphatidylinositol 4-kinase alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 181 samples with support for all annotated introns
transcript id: XM_010719953.3
SIO_010081: PI4KA
subclass of: SO_0000673
so part of: PI4KA
location: join(134946..135025,136370..136486,137741..137834,138509..138597,139009..139081,139407..139666,140140..140206,141728..141876,142239..142304,143267..143363,143654..143845,144560..144660,145434..145563,147261..147390,147988..148083,148553..148736,149285..149388,149704..149872,153683..153733,166080..166188,166612..166748,167688..167821,168827..168909,169160..169230,169329..169453,169855..169936,170526..170609,170830..170919,171924..172043,173089..173181,174719..174875,175115..175242,175922..176080,176341..176492,176989..177096,177788..177915,178010..178129,178493..178572,178713..178906,179668..179758,180505..180672,181167..181220,181909..182029,182298..182427,184440..184510,185416..185488,185599..185669,186242..186351,186976..187080,187575..187700,188025..188145,188770..188929,189854..189943,190785..190868,191075..191780)
location: region:134946-191780:1
so has part: feature:134946-135025:1:exon
so has part: feature:136370-136486:1:exon
so has part: feature:137741-137834:1:exon
so has part: feature:138509-138597:1:exon
so has part: feature:139009-139081:1:exon
so has part: feature:139407-139666:1:exon
so has part: feature:140140-140206:1:exon
so has part: feature:141728-141876:1:exon
so has part: feature:142239-142304:1:exon
so has part: feature:143267-143363:1:exon
so has part: feature:143654-143845:1:exon
so has part: feature:144560-144660:1:exon
so has part: feature:145434-145563:1:exon
so has part: feature:147261-147390:1:exon
so has part: feature:147988-148083:1:exon
so has part: feature:148553-148736:1:exon
so has part: feature:149285-149388:1:exon
so has part: feature:149704-149872:1:exon
so has part: feature:153683-153733:1:exon
so has part: feature:166080-166188:1:exon
so has part: feature:166612-166748:1:exon
so has part: feature:167688-167821:1:exon
so has part: feature:168827-168909:1:exon
so has part: feature:169160-169230:1:exon
so has part: feature:169329-169453:1:exon
so has part: feature:169855-169936:1:exon
so has part: feature:170526-170609:1:exon
so has part: feature:170830-170919:1:exon
so has part: feature:171924-172043:1:exon
so has part: feature:173089-173181:1:exon
so has part: feature:174719-174875:1:exon
so has part: feature:175115-175242:1:exon
so has part: feature:175922-176080:1:exon
so has part: feature:176341-176492:1:exon
so has part: feature:176989-177096:1:exon
so has part: feature:177788-177915:1:exon
so has part: feature:178010-178129:1:exon
so has part: feature:178493-178572:1:exon
so has part: feature:178713-178906:1:exon
so has part: feature:179668-179758:1:exon
so has part: feature:180505-180672:1:exon
so has part: feature:181167-181220:1:exon
so has part: feature:181909-182029:1:exon
so has part: feature:182298-182427:1:exon
so has part: feature:184440-184510:1:exon
so has part: feature:185416-185488:1:exon
so has part: feature:185599-185669:1:exon
so has part: feature:186242-186351:1:exon
so has part: feature:186976-187080:1:exon
so has part: feature:187575-187700:1:exon
so has part: feature:188025-188145:1:exon
so has part: feature:188770-188929:1:exon
so has part: feature:189854-189943:1:exon
so has part: feature:190785-190868:1:exon
so has part: feature:191075-191780:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134946-135025:1:exon

position:135025:1
position: 135025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:136370-136486:1:exon

position:136370:1
position: 136370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136486:1
position: 136486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:137741-137834:1:exon

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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:138509-138597:1:exon

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urn:…
SIO_000300: 5
SIO_000628: feature:139009-139081:1:exon

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reference: sequence
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position:139081:1
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urn:…
SIO_000300: 6
SIO_000628: feature:139407-139666:1:exon

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position:139666:1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:140140-140206:1:exon

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position:140206:1
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urn:…
SIO_000300: 8
SIO_000628: feature:141728-141876:1:exon

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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:142239-142304:1:exon

position:142239:1
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position:142304:1
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urn:…
SIO_000300: 10
SIO_000628: feature:143267-143363:1:exon

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reference: sequence
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position:143363:1
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urn:…
SIO_000300: 11
SIO_000628: feature:143654-143845:1:exon

position:143654:1
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reference: sequence
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position:143845:1
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urn:…
SIO_000300: 12
SIO_000628: feature:144560-144660:1:exon

position:144560:1
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reference: sequence
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position:144660:1
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urn:…
SIO_000300: 13
SIO_000628: feature:145434-145563:1:exon

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position:145563:1
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urn:…
SIO_000300: 14
SIO_000628: feature:147261-147390:1:exon

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position:147390:1
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urn:…
SIO_000300: 15
SIO_000628: feature:147988-148083:1:exon

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reference: sequence
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position:148083:1
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urn:…
SIO_000300: 16
SIO_000628: feature:148553-148736:1:exon

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reference: sequence
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position:148736:1
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urn:…
SIO_000300: 17
SIO_000628: feature:149285-149388:1:exon

position:149285:1
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reference: sequence
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position:149388:1
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urn:…
SIO_000300: 18
SIO_000628: feature:149704-149872:1:exon

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position:149872:1
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urn:…
SIO_000300: 19
SIO_000628: feature:153683-153733:1:exon

position:153683:1
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reference: sequence
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position:153733:1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:166080-166188:1:exon

position:166080:1
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reference: sequence
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position:166188:1
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urn:…
SIO_000300: 21
SIO_000628: feature:166612-166748:1:exon

position:166612:1
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position:166748:1
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urn:…
SIO_000300: 22
SIO_000628: feature:167688-167821:1:exon

position:167688:1
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position:167821:1
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urn:…
SIO_000300: 23
SIO_000628: feature:168827-168909:1:exon

position:168827:1
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position:168909:1
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urn:…
SIO_000300: 24
SIO_000628: feature:169160-169230:1:exon

position:169160:1
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reference: sequence
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position:169230:1
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urn:…
SIO_000300: 25
SIO_000628: feature:169329-169453:1:exon

position:169329:1
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position:169453:1
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urn:…
SIO_000300: 26
SIO_000628: feature:169855-169936:1:exon

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position:169936:1
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urn:…
SIO_000300: 27
SIO_000628: feature:170526-170609:1:exon

position:170526:1
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position:170609:1
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urn:…
SIO_000300: 28
SIO_000628: feature:170830-170919:1:exon

position:170830:1
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position:170919:1
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urn:…
SIO_000300: 29
SIO_000628: feature:171924-172043:1:exon

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reference: sequence
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position:172043:1
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urn:…
SIO_000300: 30
SIO_000628: feature:173089-173181:1:exon

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position:173181:1
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urn:…
SIO_000300: 31
SIO_000628: feature:174719-174875:1:exon

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position:174875:1
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urn:…
SIO_000300: 32
SIO_000628: feature:175115-175242:1:exon

position:175115:1
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position:175242:1
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urn:…
SIO_000300: 33
SIO_000628: feature:175922-176080:1:exon

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reference: sequence
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position:176080:1
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urn:…
SIO_000300: 34
SIO_000628: feature:176341-176492:1:exon

position:176341:1
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reference: sequence
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position:176492:1
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urn:…
SIO_000300: 35
SIO_000628: feature:176989-177096:1:exon

position:176989:1
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position:177096:1
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urn:…
SIO_000300: 36
SIO_000628: feature:177788-177915:1:exon

position:177788:1
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position:177915:1
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urn:…
SIO_000300: 37
SIO_000628: feature:178010-178129:1:exon

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reference: sequence
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position:178129:1
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reference: sequence
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urn:…
SIO_000300: 38
SIO_000628: feature:178493-178572:1:exon

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reference: sequence
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position:178572:1
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urn:…
SIO_000300: 39
SIO_000628: feature:178713-178906:1:exon

position:178713:1
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position:178906:1
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urn:…
SIO_000300: 40
SIO_000628: feature:179668-179758:1:exon

position:179668:1
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position:179758:1
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urn:…
SIO_000300: 41
SIO_000628: feature:180505-180672:1:exon

position:180505:1
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reference: sequence
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position:180672:1
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reference: sequence
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urn:…
SIO_000300: 42
SIO_000628: feature:181167-181220:1:exon

position:181167:1
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reference: sequence
type: ForwardStrandPosition
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position:181220:1
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urn:…
SIO_000300: 43
SIO_000628: feature:181909-182029:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:182029:1
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urn:…
SIO_000300: 44
SIO_000628: feature:182298-182427:1:exon

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reference: sequence
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position:182427:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 45
SIO_000628: feature:184440-184510:1:exon

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reference: sequence
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position:184510:1
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type: ForwardStrandPosition
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urn:…
SIO_000300: 46
SIO_000628: feature:185416-185488:1:exon

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reference: sequence
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position:185488:1
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reference: sequence
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urn:…
SIO_000300: 47
SIO_000628: feature:185599-185669:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:185669:1
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urn:…
SIO_000300: 48
SIO_000628: feature:186242-186351:1:exon

position:186242:1
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reference: sequence
type: ForwardStrandPosition
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position:186351:1
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reference: sequence
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urn:…
SIO_000300: 49
SIO_000628: feature:186976-187080:1:exon

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reference: sequence
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position:187080:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 50
SIO_000628: feature:187575-187700:1:exon

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reference: sequence
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position:187700:1
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reference: sequence
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urn:…
SIO_000300: 51
SIO_000628: feature:188025-188145:1:exon

position:188025:1
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reference: sequence
type: ForwardStrandPosition
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position:188145:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 52
SIO_000628: feature:188770-188929:1:exon

position:188770:1
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reference: sequence
type: ForwardStrandPosition
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position:188929:1
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reference: sequence
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urn:…
SIO_000300: 53
SIO_000628: feature:189854-189943:1:exon

position:189854:1
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reference: sequence
type: ForwardStrandPosition
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position:189943:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 54
SIO_000628: feature:190785-190868:1:exon

position:190785:1
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reference: sequence
type: ForwardStrandPosition
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position:190868:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 55
SIO_000628: feature:191075-191780:1:exon

position:191075:1
position: 191075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PI4KA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PI4KA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-kinase alpha
translation: MCPVDFHGIFQLDERRRDAVIALGIFLIESDLQHKDNVVPYLLRLLKGLPKVQWIEESSARKGRGLLPVAENFSFCLVTLLSDVAYRDASLREQILDAVLQVMQFLLGMCQTPQMHDKEYLCKYAVPCLIGISRAFGRYSNSEEALLSKLFPKIPPHSLRVPEELEGIRRRSFNDFRSILPSSLLTVCQEGTLKRKASSVSSISQVSPERGIPPPSSPGGSTIHYFEGSYLPDGSALDPDYYFTTISSSFSVSPLFNGINNKEFNIPLEMLRQLLNMVKQIVEDSLLKSLDAVVAEVAEMGTNTDLYYKTFSDPLYLAQFKMLRDTLYYMKDLSNSFVKEIHDFVLEQFNSSQSELQKILHDVDRLHNELSPLKLRCQANAACVDLMVWAVKDEQGAENLCIKLSEKLQSKTSSKVIIAHLPLLICCLQGLGRLCERFPVVVHSVNPSLRDFLVIPSPVLVKLYKYHSQYHTGANDIKISVTNEHSESTLNVMPGKKSQPSMYEQLRDIAIDNICRCLKAGLTIDSVIVEAFLASLSNRLYISQESDKEAHLIPDHTIRALGHIAVALRDTPKMMEPILQILQQKFCQPPSNLDVLIIDQLGCLVITGNQYIYQEVWNLFQQISVKASSVVYSATKDYKDHGYRHCSLAVINALANIAANIQGEHLVDELLMNLLELFVQLGLEGKRASERASEKGPALKASSSAGNLGVLIPVIAVLTRRLPPIKEAKPRLQKLFRDFWLYSVLMGFAVEGSGLWPEEWYEGVCEIATKSPLLTFPSKEPLRSVLQYNSAMKNDTVTSAELNELRSTIINLLDPPPEVSALINKLDFAMSTYLLSVYRLEYMRVLRSTDQDRFQVMFCYFEDKAIQKDKSGMMQCVIAVADKVFEAFLTMMADKPKTKENEEELERHAQFLLVNFNHIHKRIRRVADKYLSGLVDKFPHLLWSGTVLKTMLDILQTLSLSLSADIHKDQPYYDIPDAPYRITVPDTHEARESIVKDFAARCGMILQEAMKWAPSVTKSHLQEYLNKHQNWVSGLSQHTGLAMATESVLHFAGYNRQNTTLGATQLTERPTCVKKDYSNFMASLNLRNRYAGEVSGMIQFSNATGRTSDLNKLMVKELNNALESGQTEFYTQAMFKLTALLISSKDCDPQLLHHLCWGPLQMFNEHGMETAIACWEWLLAAKNGIEVPFMREMAGAWQMTVEQKVGLFSAEQKEADPLAASEESQPRPCPPEVTPHYIWIEFLVQRFEIAKYCSSDQIEIFSSLLQRSLSLNIGGAKGSLNRHVAAIGPRFKLLTLGLSLLHADVVPNATIRNVLREKIYSTAFDYFSWPSKFPTQEEKRLREDISILIKFWTAMFSDKKYLTASQLVPPDNQDTRSNLDINVGSRQQATQGWINTYPLSSGMSTISKKSGMSKKTNRGTQLHKYYMKRRTLLLSLLATEIERLITWYNPLSSPELELDQTGESSVANWRSKYISLSEKQWKDNVNLAWSISPHLAVQLPTRFKNTEAIGTEVTRLVRLDPGAVSDVPEAIKYLVTWHTIDADAPELSHVLCWAPTDPPTGLSYFSSMYPPHPLTAQYGVKVLRSFPPDAILFYIPQIVQALRYDKMGYVREYILWAAAKSQLLAHQFIWNMKTNIYLDEEGHQKDPDIGELLEQLVEEITGSLSGPAKEFYQREFDFFNKITNVSAIIKPFPKGDERKKACLSALSEVKVQPGCYLPSNPEAIVLDIDYKSGTPMQSAAKAPYLAKFKVKRCGVSELEKEGLRCRSDSIDESAEEGVDSKKICWQAAIFKVGDDCRQDMLALQIIDLFKNIFQLVGLDLFVFPYRVVATAPGCGVIECIPDCTSRDQLGRQTDFGMYDYFTRQYGDESTLAFQKARYNFIRSMAAYSLLLFLLQIKDRHNGNIMLDKKGHIIHIDFGFMFESSPGGNLGWEPDIKLTDEMVMIMGGKMEATPFKWFMEMCVRGYLAVRPYMDAVVSLVTLMLDTGLPCFRGQTIKLLKH…
SIO_010081: PI4KA
subclass of: SO_0000673
so part of: PI4KA
location: join(136388..136486,137741..137834,138509..138597,139009..139081,139407..139666,140140..140206,141728..141876,142239..142304,143267..143363,143654..143845,144560..144660,145434..145563,147261..147390,147988..148083,148553..148736,149285..149388,149704..149872,153683..153733,166080..166188,166612..166748,167688..167821,168827..168909,169160..169230,169329..169453,169855..169936,170526..170609,170830..170919,171924..172043,173089..173181,174719..174875,175115..175242,175922..176080,176341..176492,176989..177096,177788..177915,178010..178129,178493..178572,178713..178906,179668..179758,180505..180672,181167..181220,181909..182029,182298..182427,184440..184510,185416..185488,185599..185669,186242..186351,186976..187080,187575..187700,188025..188145,188770..188929,189854..189943,190785..190868,191075..191126)
location: region:136388-191126:1
so has part: feature:136388-136486:1:exon
so has part: feature:137741-137834:1:exon
so has part: feature:138509-138597:1:exon
so has part: feature:139009-139081:1:exon
so has part: feature:139407-139666:1:exon
so has part: feature:140140-140206:1:exon
so has part: feature:141728-141876:1:exon
so has part: feature:142239-142304:1:exon
so has part: feature:143267-143363:1:exon
so has part: feature:143654-143845:1:exon
so has part: feature:144560-144660:1:exon
so has part: feature:145434-145563:1:exon
so has part: feature:147261-147390:1:exon
so has part: feature:147988-148083:1:exon
so has part: feature:148553-148736:1:exon
so has part: feature:149285-149388:1:exon
so has part: feature:149704-149872:1:exon
so has part: feature:153683-153733:1:exon
so has part: feature:166080-166188:1:exon
so has part: feature:166612-166748:1:exon
so has part: feature:167688-167821:1:exon
so has part: feature:168827-168909:1:exon
so has part: feature:169160-169230:1:exon
so has part: feature:169329-169453:1:exon
so has part: feature:169855-169936:1:exon
so has part: feature:170526-170609:1:exon
so has part: feature:170830-170919:1:exon
so has part: feature:171924-172043:1:exon
so has part: feature:173089-173181:1:exon
so has part: feature:174719-174875:1:exon
so has part: feature:175115-175242:1:exon
so has part: feature:175922-176080:1:exon
so has part: feature:176341-176492:1:exon
so has part: feature:176989-177096:1:exon
so has part: feature:177788-177915:1:exon
so has part: feature:178010-178129:1:exon
so has part: feature:178493-178572:1:exon
so has part: feature:178713-178906:1:exon
so has part: feature:179668-179758:1:exon
so has part: feature:180505-180672:1:exon
so has part: feature:181167-181220:1:exon
so has part: feature:181909-182029:1:exon
so has part: feature:182298-182427:1:exon
so has part: feature:184440-184510:1:exon
so has part: feature:185416-185488:1:exon
so has part: feature:185599-185669:1:exon
so has part: feature:186242-186351:1:exon
so has part: feature:186976-187080:1:exon
so has part: feature:187575-187700:1:exon
so has part: feature:188025-188145:1:exon
so has part: feature:188770-188929:1:exon
so has part: feature:189854-189943:1:exon
so has part: feature:190785-190868:1:exon
so has part: feature:191075-191126:1:exon

XP_010718255.1
type: Protein
SIO_000068: ncbiprotein

position:136388:1
position: 136388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191126:1
position: 191126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136388-136486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:137741-137834:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:138509-138597:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:139009-139081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:139407-139666:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:140140-140206:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141728-141876:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142239-142304:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:143267-143363:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:143654-143845:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:144560-144660:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:145434-145563:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147261-147390:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:147988-148083:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:148553-148736:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:149285-149388:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:149704-149872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:153683-153733:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:166080-166188:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:166612-166748:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:167688-167821:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:168827-168909:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:169160-169230:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:169329-169453:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:169855-169936:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:170526-170609:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:170830-170919:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:171924-172043:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:173089-173181:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:174719-174875:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:175115-175242:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:175922-176080:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:176341-176492:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:176989-177096:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:177788-177915:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:178010-178129:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:178493-178572:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:178713-178906:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:179668-179758:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:180505-180672:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:181167-181220:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:181909-182029:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:182298-182427:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:184440-184510:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:185416-185488:1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:185599-185669:1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:186242-186351:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:186976-187080:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:187575-187700:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:188025-188145:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:188770-188929:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:189854-189943:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:190785-190868:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:191075-191126:1:exon

SERPIND1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SERPIND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(156274..164744)
location: region:156274-164744:-1
so has part: feature:156274-164744:-1:exon
subclass of: SO_0000010

100542650
type: Gene
SIO_000068: ncbigene

position:156274:-1
position: 156274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164744:-1
position: 164744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:156274-164744:-1:exon

SERPIND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SERPIND1
product: serpin family D member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 163 samples with support for all annotated introns
transcript id: XM_003210846.2
SIO_010081: SERPIND1
subclass of: SO_0000673
so part of: SERPIND1
location: complement(join(156274..156770,157192..157336,157772..158045,161883..162747,164637..164744))
location: region:156274-164744:-1
so has part: feature:164637-164744:-1:exon
so has part: feature:161883-162747:-1:exon
so has part: feature:157772-158045:-1:exon
so has part: feature:157192-157336:-1:exon
so has part: feature:156274-156770:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164637-164744:-1:exon

position:164637:-1
position: 164637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161883-162747:-1:exon

position:161883:-1
position: 161883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162747:-1
position: 162747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:157772-158045:-1:exon

position:157772:-1
position: 157772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158045:-1
position: 158045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:157192-157336:-1:exon

position:157192:-1
position: 157192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157336:-1
position: 157336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:156274-156770:-1:exon

position:156770:-1
position: 156770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERPIND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SERPIND1
product: serpin family D member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_010719951.3
SIO_010081: SERPIND1
subclass of: SO_0000673
so part of: SERPIND1
location: complement(join(156274..156770,157192..157336,157772..158045,161883..162747,164295..164316))
location: region:156274-164316:-1
so has part: feature:164295-164316:-1:exon
so has part: feature:161883-162747:-1:exon
so has part: feature:157772-158045:-1:exon
so has part: feature:157192-157336:-1:exon
so has part: feature:156274-156770:-1:exon

position:164316:-1
position: 164316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164295-164316:-1:exon

position:164295:-1
position: 164295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:161883-162747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157772-158045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157192-157336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156274-156770:-1:exon

SERPIND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SERPIND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparin cofactor 2 isoform X1
translation: MKFLFRLLALVVIITSTFCGIKDFSDHFESLKDAHTHENGTYDMPDLPLEFHRENTITNDLIPEEEEEEDYLDLDKILGEDDYSDVIDAAPHIVSEIQQGNILELFQGKTRIQRLNILNANFGFNLYRSVADKANSSDNILMAPVGISTAMAMISLGLKGQTQQEVLSVLGFEDFINASTKYELMTVHNLFRKLTHRLFRRNFGYTLRSVNDLYIRKDFSILNDFRNNMKTYYFADAQPADFSDPNFITKTNERILKLTKGLIKEALVNVNPTTLMMILNCLYFKGTWENKFPVEMTTKRSFRLNEKQTIKVPMMQTKGNFLAAADPEMDCGVIQLPFVGNISMLIVLPHKLSGMKALEKQITPQVVEKWQKSMTNRTREVVLPKFKLEKNYNLIGFLRSMGIEELFSEKGNYCGVSEEKVSIDRFNHQGTITVNEEGTEAGAITNVGFMPLSTQIRFIVDRPFLFLIYEHRTSCLLFMGRVVNPAKP
SIO_010081: SERPIND1
subclass of: SO_0000673
so part of: SERPIND1
location: complement(join(156579..156770,157192..157336,157772..158045,161883..162738))
location: region:156579-162738:-1
so has part: feature:161883-162738:-1:exon
so has part: feature:157772-158045:-1:exon
so has part: feature:157192-157336:-1:exon
so has part: feature:156579-156770:-1:exon

XP_003210894.1
type: Protein
SIO_000068: ncbiprotein

position:156579:-1
position: 156579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162738:-1
position: 162738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161883-162738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157772-158045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157192-157336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156579-156770:-1:exon

SERPIND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SERPIND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparin cofactor 2 isoform X1
translation: MKFLFRLLALVVIITSTFCGIKDFSDHFESLKDAHTHENGTYDMPDLPLEFHRENTITNDLIPEEEEEEDYLDLDKILGEDDYSDVIDAAPHIVSEIQQGNILELFQGKTRIQRLNILNANFGFNLYRSVADKANSSDNILMAPVGISTAMAMISLGLKGQTQQEVLSVLGFEDFINASTKYELMTVHNLFRKLTHRLFRRNFGYTLRSVNDLYIRKDFSILNDFRNNMKTYYFADAQPADFSDPNFITKTNERILKLTKGLIKEALVNVNPTTLMMILNCLYFKGTWENKFPVEMTTKRSFRLNEKQTIKVPMMQTKGNFLAAADPEMDCGVIQLPFVGNISMLIVLPHKLSGMKALEKQITPQVVEKWQKSMTNRTREVVLPKFKLEKNYNLIGFLRSMGIEELFSEKGNYCGVSEEKVSIDRFNHQGTITVNEEGTEAGAITNVGFMPLSTQIRFIVDRPFLFLIYEHRTSCLLFMGRVVNPAKP
SIO_010081: SERPIND1
subclass of: SO_0000673
so part of: SERPIND1
location: complement(join(156579..156770,157192..157336,157772..158045,161883..162738))
location: region:156579-162738:-1
so has part: feature:161883-162738:-1:exon
so has part: feature:157772-158045:-1:exon
so has part: feature:157192-157336:-1:exon
so has part: feature:156579-156770:-1:exon

XP_010718253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:161883-162738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157772-158045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157192-157336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156579-156770:-1:exon

SERPIND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SERPIND1
product: serpin family D member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_010719952.3
SIO_010081: SERPIND1
subclass of: SO_0000673
so part of: SERPIND1
location: complement(join(156852..157002,157192..157336,157772..158045,161883..162747,164637..164744))
location: region:156852-164744:-1
so has part: feature:164637-164744:-1:exon
so has part: feature:161883-162747:-1:exon
so has part: feature:157772-158045:-1:exon
so has part: feature:157192-157336:-1:exon
so has part: feature:156852-157002:-1:exon

position:156852:-1
position: 156852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164637-164744:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:161883-162747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157772-158045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:157192-157336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:156852-157002:-1:exon

position:157002:-1
position: 157002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SERPIND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SERPIND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparin cofactor 2 isoform X2
translation: MKFLFRLLALVVIITSTFCGIKDFSDHFESLKDAHTHENGTYDMPDLPLEFHRENTITNDLIPEEEEEEDYLDLDKILGEDDYSDVIDAAPHIVSEIQQGNILELFQGKTRIQRLNILNANFGFNLYRSVADKANSSDNILMAPVGISTAMAMISLGLKGQTQQEVLSVLGFEDFINASTKYELMTVHNLFRKLTHRLFRRNFGYTLRSVNDLYIRKDFSILNDFRNNMKTYYFADAQPADFSDPNFITKTNERILKLTKGLIKEALVNVNPTTLMMILNCLYFKGTWENKFPVEMTTKRSFRLNEKQTIKVPMMQTKGNFLAAADPEMDCGVIQLPFVGNISMLIVLPHKLSGMKALEKQITPQVVEKWQKSMTNRTREVVLPKFKLEKNYNLIGFLRSMGIEELFSEKGNYCGVSEEKVSIDRKNMSN
SIO_010081: SERPIND1
subclass of: SO_0000673
so part of: SERPIND1
location: complement(join(156985..157002,157192..157336,157772..158045,161883..162738))
location: region:156985-162738:-1
so has part: feature:161883-162738:-1:exon
so has part: feature:157772-158045:-1:exon
so has part: feature:157192-157336:-1:exon
so has part: feature:156985-157002:-1:exon

XP_010718254.1
type: Protein
SIO_000068: ncbiprotein

position:156985:-1
position: 156985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:161883-162738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:157772-158045:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:157192-157336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156985-157002:-1:exon

LOC116217261
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217261
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 192415..275765
location: region:192415-275765:1
so has part: feature:192415-275765:1:exon
subclass of: SO_0000011

116217261
type: Gene
SIO_000068: ncbigene

position:192415:1
position: 192415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275765:1
position: 275765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192415-275765:1:exon

LOC116217261
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217261
product: uncharacterized LOC116217261
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161545.1
SIO_010081: LOC116217261
subclass of: SO_0000673
so part of: LOC116217261
location: join(192415..192929,273558..273721,275562..275765)
location: region:192415-275765:1
so has part: feature:192415-192929:1:exon
so has part: feature:273558-273721:1:exon
so has part: feature:275562-275765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192415-192929:1:exon

position:192929:1
position: 192929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273558-273721:1:exon

position:273558:1
position: 273558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273721:1
position: 273721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:275562-275765:1:exon

position:275562:1
position: 275562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HIC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(289806..358880)
location: region:289806-358880:-1
so has part: feature:289806-358880:-1:exon
subclass of: SO_0000010

100542806
type: Gene
SIO_000068: ncbigene

position:289806:-1
position: 289806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358880:-1
position: 358880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289806-358880:-1:exon

HIC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HIC2
product: HIC ZBTB transcriptional repressor 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_019620950.2
SIO_010081: HIC2
subclass of: SO_0000673
so part of: HIC2
location: complement(join(289806..291741,358368..358880))
location: region:289806-358880:-1
so has part: feature:358368-358880:-1:exon
so has part: feature:289806-291741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358368-358880:-1:exon

position:358368:-1
position: 358368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:289806-291741:-1:exon

position:291741:-1
position: 291741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HIC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HIC2
product: HIC ZBTB transcriptional repressor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_010719954.3
SIO_010081: HIC2
subclass of: SO_0000673
so part of: HIC2
location: complement(join(289806..291741,297766..297904,358368..358878))
location: region:289806-358878:-1
so has part: feature:358368-358878:-1:exon
so has part: feature:297766-297904:-1:exon
so has part: feature:289806-291741:-1:exon

position:358878:-1
position: 358878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358368-358878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297766-297904:-1:exon

position:297766:-1
position: 297766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297904:-1
position: 297904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:289806-291741:-1:exon

HIC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HIC2
product: HIC ZBTB transcriptional repressor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010719955.3
SIO_010081: HIC2
subclass of: SO_0000673
so part of: HIC2
location: complement(join(289806..291741,297766..297904,320502..320571,358368..358878))
location: region:289806-358878:-1
so has part: feature:358368-358878:-1:exon
so has part: feature:320502-320571:-1:exon
so has part: feature:297766-297904:-1:exon
so has part: feature:289806-291741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358368-358878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:320502-320571:-1:exon

position:320502:-1
position: 320502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320571:-1
position: 320571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297766-297904:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289806-291741:-1:exon

HIC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypermethylated in cancer 2 protein
translation: MELPNHAKQLLLQLNQQRAKGFLCDVIIVVENALFRAHKNILAASSMYFKSLVLHDNLINLDTDMVNPTVFRQILDFIYTGKLLTTDQPGEQNFSALLTAASYLQLHDLAALCRKKLKRNSKSFSSKASGLGVGRSARSQRLSAASVIQARYSGSNEGLKGSHGKELSKGKLSDDEVFISSSNQENCHSLSRGASKNCGGGGSANGSTGDQELGLDLSKKSPSLPVAASHDDTQHSESQHGSPQSASAPAANSASSFDESGVGAPHSIADSSDPMEMDLSEECHHSLTESSQRKGLRHSSRKKEWIKKDNAFDRKDGGKDRDEGEGLPNGILLGPLSKSVERSLAGAYGADLPYSCKEEVENGKENSDDSGQSESESGGHTSANYVYRQEGFEPVAYGDNLYVCIPCGKGFPSSEQLNAHVETHTEEDLYIKEEGTYGGKDEAEDLSNANQSYSAESRPFKCSVCEKSYKDPATLRQHEKTHWLTRPFPCNICGKMFTQRGTMTRHMRSHLGLKPFACEECGMRFTRQYRLTEHMRVHSGEKPYECQLCGGKFTQQRNLISHLRMHTSPT
SIO_010081: HIC2
subclass of: SO_0000673
so part of: HIC2
location: complement(289993..291705)
location: region:289993-291705:-1
so has part: feature:289993-291705:-1:exon

XP_019476495.1
type: Protein
SIO_000068: ncbiprotein

position:289993:-1
position: 289993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291705:-1
position: 291705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289993-291705:-1:exon

HIC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypermethylated in cancer 2 protein
translation: MELPNHAKQLLLQLNQQRAKGFLCDVIIVVENALFRAHKNILAASSMYFKSLVLHDNLINLDTDMVNPTVFRQILDFIYTGKLLTTDQPGEQNFSALLTAASYLQLHDLAALCRKKLKRNSKSFSSKASGLGVGRSARSQRLSAASVIQARYSGSNEGLKGSHGKELSKGKLSDDEVFISSSNQENCHSLSRGASKNCGGGGSANGSTGDQELGLDLSKKSPSLPVAASHDDTQHSESQHGSPQSASAPAANSASSFDESGVGAPHSIADSSDPMEMDLSEECHHSLTESSQRKGLRHSSRKKEWIKKDNAFDRKDGGKDRDEGEGLPNGILLGPLSKSVERSLAGAYGADLPYSCKEEVENGKENSDDSGQSESESGGHTSANYVYRQEGFEPVAYGDNLYVCIPCGKGFPSSEQLNAHVETHTEEDLYIKEEGTYGGKDEAEDLSNANQSYSAESRPFKCSVCEKSYKDPATLRQHEKTHWLTRPFPCNICGKMFTQRGTMTRHMRSHLGLKPFACEECGMRFTRQYRLTEHMRVHSGEKPYECQLCGGKFTQQRNLISHLRMHTSPT
SIO_010081: HIC2
subclass of: SO_0000673
so part of: HIC2
location: complement(289993..291705)
location: region:289993-291705:-1
so has part: feature:289993-291705:-1:exon

XP_010718256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289993-291705:-1:exon

HIC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HIC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hypermethylated in cancer 2 protein
translation: MELPNHAKQLLLQLNQQRAKGFLCDVIIVVENALFRAHKNILAASSMYFKSLVLHDNLINLDTDMVNPTVFRQILDFIYTGKLLTTDQPGEQNFSALLTAASYLQLHDLAALCRKKLKRNSKSFSSKASGLGVGRSARSQRLSAASVIQARYSGSNEGLKGSHGKELSKGKLSDDEVFISSSNQENCHSLSRGASKNCGGGGSANGSTGDQELGLDLSKKSPSLPVAASHDDTQHSESQHGSPQSASAPAANSASSFDESGVGAPHSIADSSDPMEMDLSEECHHSLTESSQRKGLRHSSRKKEWIKKDNAFDRKDGGKDRDEGEGLPNGILLGPLSKSVERSLAGAYGADLPYSCKEEVENGKENSDDSGQSESESGGHTSANYVYRQEGFEPVAYGDNLYVCIPCGKGFPSSEQLNAHVETHTEEDLYIKEEGTYGGKDEAEDLSNANQSYSAESRPFKCSVCEKSYKDPATLRQHEKTHWLTRPFPCNICGKMFTQRGTMTRHMRSHLGLKPFACEECGMRFTRQYRLTEHMRVHSGEKPYECQLCGGKFTQQRNLISHLRMHTSPT
SIO_010081: HIC2
subclass of: SO_0000673
so part of: HIC2
location: complement(289993..291705)
location: region:289993-291705:-1
so has part: feature:289993-291705:-1:exon

XP_010718257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:289993-291705:-1:exon

LOC116217262
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 320587..341001
location: region:320587-341001:1
so has part: feature:320587-341001:1:exon
subclass of: SO_0000011

116217262
type: Gene
SIO_000068: ncbigene

position:320587:1
position: 320587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341001:1
position: 341001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320587-341001:1:exon

LOC116217262
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217262
product: uncharacterized LOC116217262
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161546.1
SIO_010081: LOC116217262
subclass of: SO_0000673
so part of: LOC116217262
location: join(320587..322085,333063..333145,340915..341001)
location: region:320587-341001:1
so has part: feature:320587-322085:1:exon
so has part: feature:333063-333145:1:exon
so has part: feature:340915-341001:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320587-322085:1:exon

position:322085:1
position: 322085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:333063-333145:1:exon

position:333063:1
position: 333063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333145:1
position: 333145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:340915-341001:1:exon

position:340915:1
position: 340915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2L3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: UBE2L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <389827..407653
location: region:389827-407653:1
so has part: feature:389827-407653:1:exon
subclass of: SO_0000010

100545078
type: Gene
SIO_000068: ncbigene

position:389827:1
position: 389827
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:407653:1
position: 407653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389827-407653:1:exon

UBE2L3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBE2L3
product: ubiquitin conjugating enzyme E2 L3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031555892.1
SIO_010081: UBE2L3
subclass of: SO_0000673
so part of: UBE2L3
location: join(<389827..389919,399415..399510,403169..403355,405600..407653)
location: region:389827-407653:1
so has part: feature:389827-389919:1:exon
so has part: feature:399415-399510:1:exon
so has part: feature:403169-403355:1:exon
so has part: feature:405600-407653:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389827-389919:1:exon

position:389919:1
position: 389919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:399415-399510:1:exon

position:399415:1
position: 399415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399510:1
position: 399510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:403169-403355:1:exon

position:403169:1
position: 403169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403355:1
position: 403355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:405600-407653:1:exon

position:405600:1
position: 405600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2L3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBE2L3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 L3
translation: CNLETTTKFKNAERSAKLCITSSLCPVTNKEELEEIRKCGMKNFRNIQVDEANLLTWQGLIVPDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFTKKYGEKRPVD
SIO_010081: UBE2L3
subclass of: SO_0000673
so part of: UBE2L3
location: join(<389827..389919,399415..399510,403169..403355,405600..405754)
location: region:389827-405754:1
so has part: feature:389827-389919:1:exon
so has part: feature:399415-399510:1:exon
so has part: feature:403169-403355:1:exon
so has part: feature:405600-405754:1:exon

XP_031411752.1
type: Protein
SIO_000068: ncbiprotein

position:405754:1
position: 405754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389827-389919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:399415-399510:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:403169-403355:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:405600-405754:1:exon

YDJC
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: YDJC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(406031..427392)
location: region:406031-427392:-1
so has part: feature:406031-427392:-1:exon
subclass of: SO_0000010

100543380
type: Gene
SIO_000068: ncbigene

position:406031:-1
position: 406031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:427392:-1
position: 427392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406031-427392:-1:exon

YDJC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: YDJC
product: YdjC chitooligosaccharide deacetylase homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 122 samples with support for all annotated introns
transcript id: XM_010719959.3
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(406031..409759,411246..411423,412118..412217,413058..413217,421671..421843,427305..427392))
location: region:406031-427392:-1
so has part: feature:427305-427392:-1:exon
so has part: feature:421671-421843:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:406031-409759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427305-427392:-1:exon

position:427305:-1
position: 427305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421671-421843:-1:exon

position:421671:-1
position: 421671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421843:-1
position: 421843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413058-413217:-1:exon

position:413058:-1
position: 413058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413217:-1
position: 413217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:412118-412217:-1:exon

position:412118:-1
position: 412118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412217:-1
position: 412217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:411246-411423:-1:exon

position:411246:-1
position: 411246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411423:-1
position: 411423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:406031-409759:-1:exon

position:409759:-1
position: 409759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YDJC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: YDJC
product: YdjC chitooligosaccharide deacetylase homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_010719958.2
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(406031..409759,411246..411423,412118..412217,413058..413217,421671..421843,422862..423183,427305..427392))
location: region:406031-427392:-1
so has part: feature:427305-427392:-1:exon
so has part: feature:422862-423183:-1:exon
so has part: feature:421671-421843:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:406031-409759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427305-427392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422862-423183:-1:exon

position:422862:-1
position: 422862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423183:-1
position: 423183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:421671-421843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:406031-409759:-1:exon

YDJC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: YDJC
product: YdjC chitooligosaccharide deacetylase homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_010719960.3
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(406031..409759,411246..411423,412118..412217,413058..413217,421671..421843,422296..422347))
location: region:406031-422347:-1
so has part: feature:422296-422347:-1:exon
so has part: feature:421671-421843:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:406031-409759:-1:exon

position:422347:-1
position: 422347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422296-422347:-1:exon

position:422296:-1
position: 422296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421671-421843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406031-409759:-1:exon

YDJC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: YDJC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X1
translation: MFQAKLIVTGDDFGYCPRRNQGIVECFLAGAVSNVSLLVNGSAAEDAAKLARRYNIPIGLHANLSEGSPVCEMLKTNSSLLSEAGFFHGKMGFRTALSKGLLNMSEVKQELKAQVDLFHELTGHLPPHMDGHQHIHVLPKVRHVFAEVLEEYGIEYTRVPIEPGLHNCDWIEPSLMDFYVGVEEDSLNTVDVFTKHGIRWPDIYVGLSTMGKNMSVSAIQNAIDTAIVEFTSKVPAHPVPQHRTVTIELMVHPGYPSLPPIGGCGEGPDDFSQSWERLHELQTLIKPELQSHYKTRNIQLCSFKDL
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(409435..409759,411246..411423,412118..412217,413058..413217,421671..421828))
location: region:409435-421828:-1
so has part: feature:421671-421828:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:409435-409759:-1:exon

XP_010718260.1
type: Protein
SIO_000068: ncbiprotein

position:409435:-1
position: 409435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421828:-1
position: 421828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421671-421828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409435-409759:-1:exon

YDJC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: YDJC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X1
translation: MFQAKLIVTGDDFGYCPRRNQGIVECFLAGAVSNVSLLVNGSAAEDAAKLARRYNIPIGLHANLSEGSPVCEMLKTNSSLLSEAGFFHGKMGFRTALSKGLLNMSEVKQELKAQVDLFHELTGHLPPHMDGHQHIHVLPKVRHVFAEVLEEYGIEYTRVPIEPGLHNCDWIEPSLMDFYVGVEEDSLNTVDVFTKHGIRWPDIYVGLSTMGKNMSVSAIQNAIDTAIVEFTSKVPAHPVPQHRTVTIELMVHPGYPSLPPIGGCGEGPDDFSQSWERLHELQTLIKPELQSHYKTRNIQLCSFKDL
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(409435..409759,411246..411423,412118..412217,413058..413217,421671..421828))
location: region:409435-421828:-1
so has part: feature:421671-421828:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:409435-409759:-1:exon

XP_010718261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421671-421828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409435-409759:-1:exon

YDJC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: YDJC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X1
translation: MFQAKLIVTGDDFGYCPRRNQGIVECFLAGAVSNVSLLVNGSAAEDAAKLARRYNIPIGLHANLSEGSPVCEMLKTNSSLLSEAGFFHGKMGFRTALSKGLLNMSEVKQELKAQVDLFHELTGHLPPHMDGHQHIHVLPKVRHVFAEVLEEYGIEYTRVPIEPGLHNCDWIEPSLMDFYVGVEEDSLNTVDVFTKHGIRWPDIYVGLSTMGKNMSVSAIQNAIDTAIVEFTSKVPAHPVPQHRTVTIELMVHPGYPSLPPIGGCGEGPDDFSQSWERLHELQTLIKPELQSHYKTRNIQLCSFKDL
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(409435..409759,411246..411423,412118..412217,413058..413217,421671..421828))
location: region:409435-421828:-1
so has part: feature:421671-421828:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:409435-409759:-1:exon

XP_010718262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:421671-421828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:409435-409759:-1:exon

YDJC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: YDJC
product: YdjC chitooligosaccharide deacetylase homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_010719961.3
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(409622..410382,411246..411423,412118..412217,413058..413217,421671..421843,422862..423183,427305..427392))
location: region:409622-427392:-1
so has part: feature:427305-427392:-1:exon
so has part: feature:422862-423183:-1:exon
so has part: feature:421671-421843:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:409622-410382:-1:exon

position:409622:-1
position: 409622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427305-427392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422862-423183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421671-421843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:409622-410382:-1:exon

position:410382:-1
position: 410382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YDJC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: YDJC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X2
translation: MFQAKLIVTGDDFGYCPRRNQGIVECFLAGAVSNVSLLVNGSAAEDAAKLARRYNIPIGLHANLSEGSPVCEMLKTNSSLLSEAGFFHGKMGFRTALSKGLLNMSEVKQELKAQVDLFHELTGHLPPHMDGHQHIHVLPKVRHVFAEVLEEYGIEYTRVPIEPGLHNCDWIEPSLMDFYVGVEEDSLNTVDVFTKHGIRIPMPPQGPCFGTAEKLLLQDPLAALRMELIWLLRELCLYTCCGNTLTSGSLWLSLAWKCCSGLHSTSSAAAESEEESIATKQT
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(410130..410382,411246..411423,412118..412217,413058..413217,421671..421828))
location: region:410130-421828:-1
so has part: feature:421671-421828:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:410130-410382:-1:exon

XP_010718263.1
type: Protein
SIO_000068: ncbiprotein

position:410130:-1
position: 410130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421671-421828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:410130-410382:-1:exon

YDJC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: YDJC
product: YdjC chitooligosaccharide deacetylase homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_031555919.1
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(410182..410363,411246..411423,412118..412217,413058..413217,421671..421843,422862..423183,427305..427392))
location: region:410182-427392:-1
so has part: feature:427305-427392:-1:exon
so has part: feature:422862-423183:-1:exon
so has part: feature:421671-421843:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:410182-410363:-1:exon

position:410182:-1
position: 410182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427305-427392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422862-423183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421671-421843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:410182-410363:-1:exon

position:410363:-1
position: 410363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YDJC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: YDJC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X3
translation: MFQAKLIVTGDDFGYCPRRNQGIVECFLAGAVSNVSLLVNGSAAEDAAKLARRYNIPIGLHANLSEGSPVCEMLKTNSSLLSEAGFFHGKMGFRTALSKGLLNMSEVKQELKAQVDLFHELTGHLPPHMDGHQHIHVLPKVRHVFAEVLEEYGIEYTRVPIEPGLHNCDWIEPSLMDFYVGVEEDSLNTVDVFTKHGIRDHALVLQRNYCSRTLLLPSGWNSYGC
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(410282..410363,411246..411423,412118..412217,413058..413217,421671..421828))
location: region:410282-421828:-1
so has part: feature:421671-421828:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:410282-410363:-1:exon

XP_031411779.1
type: Protein
SIO_000068: ncbiprotein

position:410282:-1
position: 410282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421671-421828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:410282-410363:-1:exon

YDJC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: YDJC
product: YdjC chitooligosaccharide deacetylase homolog, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031555920.1
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(410389..410996,411246..411423,412118..412217,413058..413217,421671..421843,422862..423183,427305..427392))
location: region:410389-427392:-1
so has part: feature:427305-427392:-1:exon
so has part: feature:422862-423183:-1:exon
so has part: feature:421671-421843:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:410389-410996:-1:exon

position:410389:-1
position: 410389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427305-427392:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:422862-423183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:421671-421843:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:410389-410996:-1:exon

position:410996:-1
position: 410996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YDJC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: YDJC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate deacetylase isoform X4
translation: MFQAKLIVTGDDFGYCPRRNQGIVECFLAGAVSNVSLLVNGSAAEDAAKLARRYNIPIGLHANLSEGSPVCEMLKTNSSLLSEAGFFHGKMGFRTALSKGLLNMSEVKQELKAQVDLFHELTGHLPPHMDGHQHIHVLPKVRHVFAEVLEEYGIEYTRVPIEPGLHNCDWIEPSLMDFYVGVEEDSLNTVDVFTKHGIRCQSNAT
SIO_010081: YDJC
subclass of: SO_0000673
so part of: YDJC
location: complement(join(410975..410996,411246..411423,412118..412217,413058..413217,421671..421828))
location: region:410975-421828:-1
so has part: feature:421671-421828:-1:exon
so has part: feature:413058-413217:-1:exon
so has part: feature:412118-412217:-1:exon
so has part: feature:411246-411423:-1:exon
so has part: feature:410975-410996:-1:exon

XP_031411780.1
type: Protein
SIO_000068: ncbiprotein

position:410975:-1
position: 410975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421671-421828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413058-413217:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:412118-412217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:411246-411423:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:410975-410996:-1:exon

LOC109370298
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 420863..427350
location: region:420863-427350:1
so has part: feature:420863-427350:1:exon
subclass of: SO_0000011

109370298
type: Gene
SIO_000068: ncbigene

position:420863:1
position: 420863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427350:1
position: 427350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420863-427350:1:exon

LOC109370298
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370298
product: uncharacterized LOC109370298
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_004161547.1
SIO_010081: LOC109370298
subclass of: SO_0000673
so part of: LOC109370298
location: join(420863..420949,426378..426453,427265..427350)
location: region:420863-427350:1
so has part: feature:420863-420949:1:exon
so has part: feature:426378-426453:1:exon
so has part: feature:427265-427350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420863-420949:1:exon

position:420949:1
position: 420949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:426378-426453:1:exon

position:426378:1
position: 426378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426453:1
position: 426453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:427265-427350:1:exon

position:427265:1
position: 427265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SDF2L1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SDF2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 427863..432363
location: region:427863-432363:1
so has part: feature:427863-432363:1:exon
subclass of: SO_0000010

100543535
type: Gene
SIO_000068: ncbigene

position:427863:1
position: 427863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:432363:1
position: 432363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427863-432363:1:exon

SDF2L1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SDF2L1
product: stromal cell derived factor 2 like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010719957.3
SIO_010081: SDF2L1
subclass of: SO_0000673
so part of: SDF2L1
location: join(427863..428088,428625..428821,430754..432363)
location: region:427863-432363:1
so has part: feature:427863-428088:1:exon
so has part: feature:428625-428821:1:exon
so has part: feature:430754-432363:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427863-428088:1:exon

position:428088:1
position: 428088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428625-428821:1:exon

position:428625:1
position: 428625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:428821:1
position: 428821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:430754-432363:1:exon

position:430754:1
position: 430754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SDF2L1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SDF2L1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stromal cell-derived factor 2-like protein 1
translation: MRGGCRLLPLLLLCGLCGGRELAPGAVTCGSVLKLLNTRHSVRLHSHEVKYGSGSGQQSVTGVEASDDANSYWRVRGKADGSCQRGTPVKCGQAIRLTHVNTGKNLHTHHFPSPLSNNQEVSAFGDDGEGDDLDIWIVQCSGTHWEREDAVRFKHVGTEVFLSITGEQYGHPIRGQREVHGMPTANHHNYWKAMEGVFIKPSMDLAKHDEL
SIO_010081: SDF2L1
subclass of: SO_0000673
so part of: SDF2L1
location: join(427929..428088,428625..428821,430754..431032)
location: region:427929-431032:1
so has part: feature:427929-428088:1:exon
so has part: feature:428625-428821:1:exon
so has part: feature:430754-431032:1:exon

XP_010718259.1
type: Protein
SIO_000068: ncbiprotein

position:427929:1
position: 427929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431032:1
position: 431032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427929-428088:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:428625-428821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:430754-431032:1:exon

LOC109370299
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370299
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(433765..442137)
location: region:433765-442137:-1
so has part: feature:433765-442137:-1:exon
subclass of: SO_0000011

109370299
type: Gene
SIO_000068: ncbigene

position:433765:-1
position: 433765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442137:-1
position: 442137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433765-442137:-1:exon

LOC109370299
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370299
product: uncharacterized LOC109370299
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_002120309.1
SIO_010081: LOC109370299
subclass of: SO_0000673
so part of: LOC109370299
location: complement(join(433765..434313,434777..442137))
location: region:433765-442137:-1
so has part: feature:434777-442137:-1:exon
so has part: feature:433765-434313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434777-442137:-1:exon

position:434777:-1
position: 434777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433765-434313:-1:exon

position:434313:-1
position: 434313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TOP3B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TOP3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 465986..508396
location: region:465986-508396:1
so has part: feature:465986-508396:1:exon
subclass of: SO_0000010

100545231
type: Gene
SIO_000068: ncbigene

position:465986:1
position: 465986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508396:1
position: 508396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465986-508396:1:exon

TOP3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TOP3B
product: DNA topoisomerase III beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_019620953.2
SIO_010081: TOP3B
subclass of: SO_0000673
so part of: TOP3B
location: join(465986..466208,496117..496248,497225..497331,498024..498098,499013..499209,499642..499798,500906..501019,501897..501987,502302..502456,502685..502790,503698..503844,504480..504653,505426..505554,505789..505938,506327..506427,506682..506883,507880..508396)
location: region:465986-508396:1
so has part: feature:465986-466208:1:exon
so has part: feature:496117-496248:1:exon
so has part: feature:497225-497331:1:exon
so has part: feature:498024-498098:1:exon
so has part: feature:499013-499209:1:exon
so has part: feature:499642-499798:1:exon
so has part: feature:500906-501019:1:exon
so has part: feature:501897-501987:1:exon
so has part: feature:502302-502456:1:exon
so has part: feature:502685-502790:1:exon
so has part: feature:503698-503844:1:exon
so has part: feature:504480-504653:1:exon
so has part: feature:505426-505554:1:exon
so has part: feature:505789-505938:1:exon
so has part: feature:506327-506427:1:exon
so has part: feature:506682-506883:1:exon
so has part: feature:507880-508396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:465986-466208:1:exon

position:466208:1
position: 466208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:496117-496248:1:exon

position:496117:1
position: 496117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496248:1
position: 496248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:497225-497331:1:exon

position:497225:1
position: 497225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497331:1
position: 497331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:498024-498098:1:exon

position:498024:1
position: 498024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498098:1
position: 498098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:499013-499209:1:exon

position:499013:1
position: 499013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499209:1
position: 499209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:499642-499798:1:exon

position:499642:1
position: 499642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499798:1
position: 499798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:500906-501019:1:exon

position:500906:1
position: 500906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501019:1
position: 501019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:501897-501987:1:exon

position:501897:1
position: 501897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501987:1
position: 501987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:502302-502456:1:exon

position:502302:1
position: 502302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502456:1
position: 502456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:502685-502790:1:exon

position:502685:1
position: 502685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502790:1
position: 502790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:503698-503844:1:exon

position:503698:1
position: 503698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503844:1
position: 503844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:504480-504653:1:exon

position:504480:1
position: 504480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504653:1
position: 504653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:505426-505554:1:exon

position:505426:1
position: 505426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505554:1
position: 505554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:505789-505938:1:exon

position:505789:1
position: 505789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505938:1
position: 505938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:506327-506427:1:exon

position:506327:1
position: 506327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506427:1
position: 506427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:506682-506883:1:exon

position:506682:1
position: 506682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506883:1
position: 506883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:507880-508396:1:exon

position:507880:1
position: 507880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TOP3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TOP3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA topoisomerase 3-beta-1 isoform X2
translation: MFHFHLSTRHSEERTGNMSSRKGLNGACSVHEYTGSFIGQSAHFKMTSVCGHVMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDCIVLWLDCDKEGENICFEVLDAVLPVMNKPPSTERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDARQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNPEKESSLTLDWDRVRVFDREIAQMFLNITKTAREAKVESVSKKEKVKQRPLALNTVEMLRVASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGCLRQQANNPYWAETVKALLSEGINRPRKGHDAGDHPPITPMKAATEVELGGDGWRLYEYITRHFIATVSADCKYLQTNISFSIGPERFSCVGKVVTSPGFTEIMPWHSIPLEESLPCCEKGDLFPVGEIKLLEMQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNLGIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSIAGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKLYKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSMLGIGQCVECENGVLVLDSTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCDLCDAALVDVDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRRPGGRPNPKKPKDKMAALAAYFV
SIO_010081: TOP3B
subclass of: SO_0000673
so part of: TOP3B
location: join(466163..466208,496117..496248,497225..497331,498024..498098,499013..499209,499642..499798,500906..501019,501897..501987,502302..502456,502685..502790,503698..503844,504480..504653,505426..505554,505789..505938,506327..506427,506682..506883,507880..508361)
location: region:466163-508361:1
so has part: feature:466163-466208:1:exon
so has part: feature:496117-496248:1:exon
so has part: feature:497225-497331:1:exon
so has part: feature:498024-498098:1:exon
so has part: feature:499013-499209:1:exon
so has part: feature:499642-499798:1:exon
so has part: feature:500906-501019:1:exon
so has part: feature:501897-501987:1:exon
so has part: feature:502302-502456:1:exon
so has part: feature:502685-502790:1:exon
so has part: feature:503698-503844:1:exon
so has part: feature:504480-504653:1:exon
so has part: feature:505426-505554:1:exon
so has part: feature:505789-505938:1:exon
so has part: feature:506327-506427:1:exon
so has part: feature:506682-506883:1:exon
so has part: feature:507880-508361:1:exon

XP_019476498.1
type: Protein
SIO_000068: ncbiprotein

position:466163:1
position: 466163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508361:1
position: 508361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466163-466208:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496117-496248:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497225-497331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498024-498098:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499013-499209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499642-499798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:500906-501019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:501897-501987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502302-502456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:502685-502790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503698-503844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504480-504653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505426-505554:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505789-505938:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:506327-506427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506682-506883:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:507880-508361:1:exon

TOP3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TOP3B
product: DNA topoisomerase III beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_003210862.4
SIO_010081: TOP3B
subclass of: SO_0000673
so part of: TOP3B
location: join(494949..495230,496117..496248,497225..497331,498024..498098,499013..499209,499642..499798,500906..501019,501897..501987,502302..502456,502685..502790,503698..503844,504480..504653,505426..505554,505789..505938,506327..506427,506682..506883,507880..508396)
location: region:494949-508396:1
so has part: feature:494949-495230:1:exon
so has part: feature:496117-496248:1:exon
so has part: feature:497225-497331:1:exon
so has part: feature:498024-498098:1:exon
so has part: feature:499013-499209:1:exon
so has part: feature:499642-499798:1:exon
so has part: feature:500906-501019:1:exon
so has part: feature:501897-501987:1:exon
so has part: feature:502302-502456:1:exon
so has part: feature:502685-502790:1:exon
so has part: feature:503698-503844:1:exon
so has part: feature:504480-504653:1:exon
so has part: feature:505426-505554:1:exon
so has part: feature:505789-505938:1:exon
so has part: feature:506327-506427:1:exon
so has part: feature:506682-506883:1:exon
so has part: feature:507880-508396:1:exon

position:494949:1
position: 494949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494949-495230:1:exon

position:495230:1
position: 495230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:496117-496248:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497225-497331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498024-498098:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499013-499209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499642-499798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:500906-501019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:501897-501987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502302-502456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:502685-502790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503698-503844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504480-504653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505426-505554:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505789-505938:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:506327-506427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506682-506883:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:507880-508396:1:exon

TOP3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TOP3B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA topoisomerase 3-beta-1 isoform X1
translation: MRTVLMVAEKPSLAQSIAKILSRGNMSSRKGLNGACSVHEYTGSFIGQSAHFKMTSVCGHVMTLDFIGKYNSWDKVDPAELFSKAPTEKKEANPKLTMVKFLQVEGRGCDCIVLWLDCDKEGENICFEVLDAVLPVMNKPPSTERTIYRAKFSSITDTDICNAMNHLGEPNRNEALSVDARQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETYWVLQAKVNPEKESSLTLDWDRVRVFDREIAQMFLNITKTAREAKVESVSKKEKVKQRPLALNTVEMLRVASAALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGCLRQQANNPYWAETVKALLSEGINRPRKGHDAGDHPPITPMKAATEVELGGDGWRLYEYITRHFIATVSADCKYLQTNISFSIGPERFSCVGKVVTSPGFTEIMPWHSIPLEESLPCCEKGDLFPVGEIKLLEMQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNLGIVLVHGYYKIDAELVLPTIRSAVEKQLNLIALGKANYHQVLEHTLDIFKRKFHYFVDSIAGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDDTYSLPQNGTIKLYKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSMLGIGQCVECENGVLVLDSTSGPKWKMACNKCNVIVHFFENAHKVRVSPETCDLCDAALVDVDFNKAKSPLPGDETQHSGCVFCDPVFQDLVELKHAAMRHPMHRGGQGKRQGRGRGKGRRPGGRPNPKKPKDKMAALAAYFV
SIO_010081: TOP3B
subclass of: SO_0000673
so part of: TOP3B
location: join(495161..495230,496117..496248,497225..497331,498024..498098,499013..499209,499642..499798,500906..501019,501897..501987,502302..502456,502685..502790,503698..503844,504480..504653,505426..505554,505789..505938,506327..506427,506682..506883,507880..508361)
location: region:495161-508361:1
so has part: feature:495161-495230:1:exon
so has part: feature:496117-496248:1:exon
so has part: feature:497225-497331:1:exon
so has part: feature:498024-498098:1:exon
so has part: feature:499013-499209:1:exon
so has part: feature:499642-499798:1:exon
so has part: feature:500906-501019:1:exon
so has part: feature:501897-501987:1:exon
so has part: feature:502302-502456:1:exon
so has part: feature:502685-502790:1:exon
so has part: feature:503698-503844:1:exon
so has part: feature:504480-504653:1:exon
so has part: feature:505426-505554:1:exon
so has part: feature:505789-505938:1:exon
so has part: feature:506327-506427:1:exon
so has part: feature:506682-506883:1:exon
so has part: feature:507880-508361:1:exon

XP_003210910.1
type: Protein
SIO_000068: ncbiprotein

position:495161:1
position: 495161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:495161-495230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:496117-496248:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497225-497331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498024-498098:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:499013-499209:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:499642-499798:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:500906-501019:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:501897-501987:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502302-502456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:502685-502790:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503698-503844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:504480-504653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505426-505554:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:505789-505938:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:506327-506427:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:506682-506883:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:507880-508361:1:exon

PPM1F
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PPM1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <515315..527784
location: region:515315-527784:1
so has part: feature:515315-527784:1:exon
subclass of: SO_0000010

100543689
type: Gene
SIO_000068: ncbigene

position:515315:1
position: 515315
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:527784:1
position: 527784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515315-527784:1:exon

PPM1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PPM1F
product: protein phosphatase, Mg2+/Mn2+ dependent 1F
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 211 samples with support for all annotated introns
transcript id: XM_031555893.1
SIO_010081: PPM1F
subclass of: SO_0000673
so part of: PPM1F
location: join(<515315..515483,516599..516798,517433..517621,518806..518949,519233..519326,519896..527784)
location: region:515315-527784:1
so has part: feature:515315-515483:1:exon
so has part: feature:516599-516798:1:exon
so has part: feature:517433-517621:1:exon
so has part: feature:518806-518949:1:exon
so has part: feature:519233-519326:1:exon
so has part: feature:519896-527784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:515315-515483:1:exon

position:515483:1
position: 515483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516599-516798:1:exon

position:516599:1
position: 516599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516798:1
position: 516798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:517433-517621:1:exon

position:517433:1
position: 517433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517621:1
position: 517621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518806-518949:1:exon

position:518806:1
position: 518806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518949:1
position: 518949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:519233-519326:1:exon

position:519233:1
position: 519233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519326:1
position: 519326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:519896-527784:1:exon

position:519896:1
position: 519896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPM1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PPM1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1F
translation: NTALLSLPFVTSRGVSPLLAASVIHTAVDEVLRTDLTEFKRESVEKQGEGEEERFTLLDGESLQRCFFNKLRDVCFEWQKQLPPLRPLKRFLLVSIHAIRNTRRKMEDRHVILMEFNQLFGLADDIDRAYFAIFDGHGGVDAANYSATHLHVNVGLHREIVKNPAEALKCSFQKTDEMFIFKAKRERLRSGTTGVSALIVGNKLHIAWLGDSQVMLVQQGNAVTLMEPHKPEREDERARIEALGGCVTYMDCWRVNGTLAVSRAIGDVCQKPYISGDADGDSFDLTGSEDYLLLACDGFFDAVKPYEVVDLVLDHLMQTKGVGLKAAERLVAAAKENGSNDNITVLVVFLRDPQDILADCLRDTKSLEAGDDARSSPFNFLSCEAAATQ
SIO_010081: PPM1F
subclass of: SO_0000673
so part of: PPM1F
location: join(<515315..515483,516599..516798,517433..517621,518806..518949,519233..519326,519896..520269)
location: region:515315-520269:1
so has part: feature:515315-515483:1:exon
so has part: feature:516599-516798:1:exon
so has part: feature:517433-517621:1:exon
so has part: feature:518806-518949:1:exon
so has part: feature:519233-519326:1:exon
so has part: feature:519896-520269:1:exon

XP_031411753.1
type: Protein
SIO_000068: ncbiprotein

position:520269:1
position: 520269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515315-515483:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516599-516798:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:517433-517621:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518806-518949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519233-519326:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:519896-520269:1:exon

MAPK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MAPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 553310..578155
location: region:553310-578155:1
so has part: feature:553310-578155:1:exon
subclass of: SO_0000010

100543845
type: Gene
SIO_000068: ncbigene

position:553310:1
position: 553310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578155:1
position: 578155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553310-578155:1:exon

MAPK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MAPK1
product: mitogen-activated protein kinase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_010719963.3
SIO_010081: MAPK1
subclass of: SO_0000673
so part of: MAPK1
location: join(553310..553488,558044..558226,559818..560007,562908..563024,564622..564736,565351..565482,566583..566692,567811..567938,570000..578155)
location: region:553310-578155:1
so has part: feature:553310-553488:1:exon
so has part: feature:558044-558226:1:exon
so has part: feature:559818-560007:1:exon
so has part: feature:562908-563024:1:exon
so has part: feature:564622-564736:1:exon
so has part: feature:565351-565482:1:exon
so has part: feature:566583-566692:1:exon
so has part: feature:567811-567938:1:exon
so has part: feature:570000-578155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553310-553488:1:exon

position:553488:1
position: 553488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:558044-558226:1:exon

position:558044:1
position: 558044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558226:1
position: 558226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:559818-560007:1:exon

position:559818:1
position: 559818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560007:1
position: 560007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:562908-563024:1:exon

position:562908:1
position: 562908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563024:1
position: 563024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:564622-564736:1:exon

position:564622:1
position: 564622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564736:1
position: 564736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:565351-565482:1:exon

position:565351:1
position: 565351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565482:1
position: 565482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:566583-566692:1:exon

position:566583:1
position: 566583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566692:1
position: 566692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:567811-567938:1:exon

position:567811:1
position: 567811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567938:1
position: 567938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:570000-578155:1:exon

position:570000:1
position: 570000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MAPK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MAPK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitogen-activated protein kinase 1
translation: MTWGGSLSTGDGAFSSHKSGGCSEKGPLRVPCIALLPASLQGVPALCHRWLRTQSSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADPKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPVAEAPFKFDMELDDLPKEKLKELIFEETARFQPGYRS
SIO_010081: MAPK1
subclass of: SO_0000673
so part of: MAPK1
location: join(553325..553488,558044..558226,559818..560007,562908..563024,564622..564736,565351..565482,566583..566692,567811..567927)
location: region:553325-567927:1
so has part: feature:553325-553488:1:exon
so has part: feature:558044-558226:1:exon
so has part: feature:559818-560007:1:exon
so has part: feature:562908-563024:1:exon
so has part: feature:564622-564736:1:exon
so has part: feature:565351-565482:1:exon
so has part: feature:566583-566692:1:exon
so has part: feature:567811-567927:1:exon

XP_010718265.1
type: Protein
SIO_000068: ncbiprotein

position:553325:1
position: 553325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567927:1
position: 567927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553325-553488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:558044-558226:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:559818-560007:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562908-563024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:564622-564736:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:565351-565482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:566583-566692:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:567811-567927:1:exon

YPEL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: YPEL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 593829..608803
location: region:593829-608803:1
so has part: feature:593829-608803:1:exon
subclass of: SO_0000010

100543995
type: Gene
SIO_000068: ncbigene

position:593829:1
position: 593829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608803:1
position: 608803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593829-608803:1:exon

YPEL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: YPEL1
product: yippee like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_010719964.3
SIO_010081: YPEL1
subclass of: SO_0000673
so part of: YPEL1
location: join(593829..593946,595731..596013,602220..602263,603554..603662,604414..608803)
location: region:593829-608803:1
so has part: feature:593829-593946:1:exon
so has part: feature:595731-596013:1:exon
so has part: feature:602220-602263:1:exon
so has part: feature:603554-603662:1:exon
so has part: feature:604414-608803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593829-593946:1:exon

position:593946:1
position: 593946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595731-596013:1:exon

position:595731:1
position: 595731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:596013:1
position: 596013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:602220-602263:1:exon

position:602220:1
position: 602220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602263:1
position: 602263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:603554-603662:1:exon

position:603554:1
position: 603554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603662:1
position: 603662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:604414-608803:1:exon

position:604414:1
position: 604414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YPEL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: YPEL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein yippee-like 1
translation: MVKMTKSKTFQAYLPNCHRTYSCIHCRAHLANHDELISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTGLHAVADIYCENCKTTLGWKYEHAFESSQKYKEGKFIIELAHMIKDNGWE
SIO_010081: YPEL1
subclass of: SO_0000673
so part of: YPEL1
location: join(595897..596013,602220..602263,603554..603662,604414..604503)
location: region:595897-604503:1
so has part: feature:595897-596013:1:exon
so has part: feature:602220-602263:1:exon
so has part: feature:603554-603662:1:exon
so has part: feature:604414-604503:1:exon

XP_010718266.1
type: Protein
SIO_000068: ncbiprotein

position:595897:1
position: 595897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604503:1
position: 604503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595897-596013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:602220-602263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603554-603662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:604414-604503:1:exon

LOC104913521
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 608862..611754
location: region:608862-611754:1
so has part: feature:608862-611754:1:exon
subclass of: SO_0000011

104913521
type: Gene
SIO_000068: ncbigene

position:608862:1
position: 608862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611754:1
position: 611754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608862-611754:1:exon

LOC104913521
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913521
product: uncharacterized LOC104913521
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XR_004161548.1
SIO_010081: LOC104913521
subclass of: SO_0000673
so part of: LOC104913521
location: join(608862..609811,610434..610649,611427..611754)
location: region:608862-611754:1
so has part: feature:608862-609811:1:exon
so has part: feature:610434-610649:1:exon
so has part: feature:611427-611754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:608862-609811:1:exon

position:609811:1
position: 609811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:610434-610649:1:exon

position:610434:1
position: 610434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:610649:1
position: 610649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611427-611754:1:exon

position:611427:1
position: 611427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPIL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PPIL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(617516..675587)
location: region:617516-675587:-1
so has part: feature:617516-675587:-1:exon
subclass of: SO_0000010

100544151
type: Gene
SIO_000068: ncbigene

position:617516:-1
position: 617516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675587:-1
position: 675587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617516-675587:-1:exon

PPIL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PPIL2
product: peptidylprolyl isomerase like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_010719965.3
SIO_010081: PPIL2
subclass of: SO_0000673
so part of: PPIL2
location: complement(join(617516..618776,620350..620489,620987..621049,621204..621276,629718..629774,632165..632282,639331..639364,641237..641326,651552..651658,652840..652915,654370..654530,655796..655871,663082..663171,663644..663735,665892..665943,674086..674137,674287..674349,674984..675029,675132..675181,675342..675587))
location: region:617516-675587:-1
so has part: feature:675342-675587:-1:exon
so has part: feature:675132-675181:-1:exon
so has part: feature:674984-675029:-1:exon
so has part: feature:674287-674349:-1:exon
so has part: feature:674086-674137:-1:exon
so has part: feature:665892-665943:-1:exon
so has part: feature:663644-663735:-1:exon
so has part: feature:663082-663171:-1:exon
so has part: feature:655796-655871:-1:exon
so has part: feature:654370-654530:-1:exon
so has part: feature:652840-652915:-1:exon
so has part: feature:651552-651658:-1:exon
so has part: feature:641237-641326:-1:exon
so has part: feature:639331-639364:-1:exon
so has part: feature:632165-632282:-1:exon
so has part: feature:629718-629774:-1:exon
so has part: feature:621204-621276:-1:exon
so has part: feature:620987-621049:-1:exon
so has part: feature:620350-620489:-1:exon
so has part: feature:617516-618776:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:675342-675587:-1:exon

position:675342:-1
position: 675342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675132-675181:-1:exon

position:675132:-1
position: 675132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675181:-1
position: 675181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:674984-675029:-1:exon

position:674984:-1
position: 674984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675029:-1
position: 675029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:674287-674349:-1:exon

position:674287:-1
position: 674287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674349:-1
position: 674349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:674086-674137:-1:exon

position:674086:-1
position: 674086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674137:-1
position: 674137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:665892-665943:-1:exon

position:665892:-1
position: 665892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:665943:-1
position: 665943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:663644-663735:-1:exon

position:663644:-1
position: 663644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663735:-1
position: 663735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:663082-663171:-1:exon

position:663082:-1
position: 663082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:663171:-1
position: 663171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:655796-655871:-1:exon

position:655796:-1
position: 655796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:655871:-1
position: 655871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:654370-654530:-1:exon

position:654370:-1
position: 654370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:654530:-1
position: 654530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:652840-652915:-1:exon

position:652840:-1
position: 652840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:652915:-1
position: 652915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:651552-651658:-1:exon

position:651552:-1
position: 651552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:651658:-1
position: 651658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:641237-641326:-1:exon

position:641237:-1
position: 641237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:641326:-1
position: 641326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:639331-639364:-1:exon

position:639331:-1
position: 639331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639364:-1
position: 639364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:632165-632282:-1:exon

position:632165:-1
position: 632165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632282:-1
position: 632282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:629718-629774:-1:exon

position:629718:-1
position: 629718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629774:-1
position: 629774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:621204-621276:-1:exon

position:621204:-1
position: 621204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621276:-1
position: 621276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:620987-621049:-1:exon

position:620987:-1
position: 620987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621049:-1
position: 621049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:620350-620489:-1:exon

position:620350:-1
position: 620350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620489:-1
position: 620489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:617516-618776:-1:exon

position:618776:-1
position: 618776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPIL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PPIL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING-type E3 ubiquitin-protein ligase PPIL2
translation: MGKRQHQKDKMYITCAEYTQFYGGKKADHPRTNFRRISFDHCSLSLQPFEYPVCTPDGMVFDILSIVPWIKKYGTNPITGEKLDAKSLIKLNFAKNSEGKYHCPVLFTVFTNNSHIVAIKTTGNVFAYEAVEQLNIKPKCYKDLLTDEPFTRQDIVTLQDPTNLDKFNVSNFFHVKNNIKVVDPDEEKAKLDPSYYLKNTNTETRETLLELYKEFKGDEILAATMKAPEKKKVDKLNAAHYSTGAVSASFTSTAMVPETTHEAAAIEDDVVRYQYVKKKGYVRLHTNKGDLNLELHCDMTPRTCENFIKLCKKNYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKDEFKPNLSHTGRGILSMANSGPNTNKSQFFITFRSCAYLDKKHTVFGRVVGGFETLTAMENVESDPKTDRPKEEIRIQATTVFVDPYEEADAQVAAEREKVQLEEEAAKTKAEVVPLKKDVQTPKTYRQGIGKYINMAAAKRSMEDDGPSTSTAAKKEKKSAGFGDFSSW
SIO_010081: PPIL2
subclass of: SO_0000673
so part of: PPIL2
location: complement(join(618683..618776,620350..620489,620987..621049,621204..621276,629718..629774,632165..632282,639331..639364,641237..641326,651552..651658,652840..652915,654370..654530,655796..655871,663082..663171,663644..663735,665892..665943,674086..674137,674287..674349,674984..675029,675132..675181,675342..675373))
location: region:618683-675373:-1
so has part: feature:675342-675373:-1:exon
so has part: feature:675132-675181:-1:exon
so has part: feature:674984-675029:-1:exon
so has part: feature:674287-674349:-1:exon
so has part: feature:674086-674137:-1:exon
so has part: feature:665892-665943:-1:exon
so has part: feature:663644-663735:-1:exon
so has part: feature:663082-663171:-1:exon
so has part: feature:655796-655871:-1:exon
so has part: feature:654370-654530:-1:exon
so has part: feature:652840-652915:-1:exon
so has part: feature:651552-651658:-1:exon
so has part: feature:641237-641326:-1:exon
so has part: feature:639331-639364:-1:exon
so has part: feature:632165-632282:-1:exon
so has part: feature:629718-629774:-1:exon
so has part: feature:621204-621276:-1:exon
so has part: feature:620987-621049:-1:exon
so has part: feature:620350-620489:-1:exon
so has part: feature:618683-618776:-1:exon

XP_010718267.1
type: Protein
SIO_000068: ncbiprotein

position:618683:-1
position: 618683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675373:-1
position: 675373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:675342-675373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675132-675181:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:674984-675029:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:674287-674349:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:674086-674137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665892-665943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:663644-663735:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:663082-663171:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:655796-655871:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:654370-654530:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:652840-652915:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:651552-651658:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:641237-641326:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:639331-639364:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:632165-632282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:629718-629774:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:621204-621276:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:620987-621049:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:620350-620489:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:618683-618776:-1:exon

LOC109370301
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 651989..653315
location: region:651989-653315:1
so has part: feature:651989-653315:1:exon
subclass of: SO_0000011

109370301
type: Gene
SIO_000068: ncbigene

position:651989:1
position: 651989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:653315:1
position: 653315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651989-653315:1:exon

LOC109370301
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370301
product: uncharacterized LOC109370301
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002120314.2
SIO_010081: LOC109370301
subclass of: SO_0000673
so part of: LOC109370301
location: join(651989..652353,652681..652803,653230..653315)
location: region:651989-653315:1
so has part: feature:651989-652353:1:exon
so has part: feature:652681-652803:1:exon
so has part: feature:653230-653315:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:651989-652353:1:exon

position:652353:1
position: 652353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:652681-652803:1:exon

position:652681:1
position: 652681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652803:1
position: 652803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:653230-653315:1:exon

position:653230:1
position: 653230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100544306
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544306
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(676849..702913)
location: region:676849-702913:-1
so has part: feature:676849-702913:-1:exon
subclass of: SO_0000010

100544306
type: Gene
SIO_000068: ncbigene

position:676849:-1
position: 676849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702913:-1
position: 702913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676849-702913:-1:exon

LOC100544306
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544306
product: protein HIRA
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_019620957.1
SIO_010081: LOC100544306
subclass of: SO_0000673
so part of: LOC100544306
location: complement(join(676849..677820,678384..678472,679493..679656,680146..680268,681184..681289,681991..682049,682788..682949,684138..684286,685089..685193,685899..686103,687237..687407,688794..688988,689358..689443,689777..690004,690571..690676,692990..693060,694774..694887,695413..695580,696428..696588,697539..697634,697959..698053,698570..698660,699416..699526,700235..700297,702883..702913))
location: region:676849-702913:-1
so has part: feature:702883-702913:-1:exon
so has part: feature:700235-700297:-1:exon
so has part: feature:699416-699526:-1:exon
so has part: feature:698570-698660:-1:exon
so has part: feature:697959-698053:-1:exon
so has part: feature:697539-697634:-1:exon
so has part: feature:696428-696588:-1:exon
so has part: feature:695413-695580:-1:exon
so has part: feature:694774-694887:-1:exon
so has part: feature:692990-693060:-1:exon
so has part: feature:690571-690676:-1:exon
so has part: feature:689777-690004:-1:exon
so has part: feature:689358-689443:-1:exon
so has part: feature:688794-688988:-1:exon
so has part: feature:687237-687407:-1:exon
so has part: feature:685899-686103:-1:exon
so has part: feature:685089-685193:-1:exon
so has part: feature:684138-684286:-1:exon
so has part: feature:682788-682949:-1:exon
so has part: feature:681991-682049:-1:exon
so has part: feature:681184-681289:-1:exon
so has part: feature:680146-680268:-1:exon
so has part: feature:679493-679656:-1:exon
so has part: feature:678384-678472:-1:exon
so has part: feature:676849-677820:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:702883-702913:-1:exon

position:702883:-1
position: 702883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:700235-700297:-1:exon

position:700235:-1
position: 700235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700297:-1
position: 700297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:699416-699526:-1:exon

position:699416:-1
position: 699416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699526:-1
position: 699526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:698570-698660:-1:exon

position:698570:-1
position: 698570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698660:-1
position: 698660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:697959-698053:-1:exon

position:697959:-1
position: 697959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698053:-1
position: 698053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:697539-697634:-1:exon

position:697539:-1
position: 697539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697634:-1
position: 697634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:696428-696588:-1:exon

position:696428:-1
position: 696428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:696588:-1
position: 696588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:695413-695580:-1:exon

position:695413:-1
position: 695413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695580:-1
position: 695580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:694774-694887:-1:exon

position:694774:-1
position: 694774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694887:-1
position: 694887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:692990-693060:-1:exon

position:692990:-1
position: 692990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693060:-1
position: 693060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:690571-690676:-1:exon

position:690571:-1
position: 690571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690676:-1
position: 690676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:689777-690004:-1:exon

position:689777:-1
position: 689777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690004:-1
position: 690004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:689358-689443:-1:exon

position:689358:-1
position: 689358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689443:-1
position: 689443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:688794-688988:-1:exon

position:688794:-1
position: 688794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688988:-1
position: 688988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:687237-687407:-1:exon

position:687237:-1
position: 687237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687407:-1
position: 687407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:685899-686103:-1:exon

position:685899:-1
position: 685899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686103:-1
position: 686103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:685089-685193:-1:exon

position:685089:-1
position: 685089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685193:-1
position: 685193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:684138-684286:-1:exon

position:684138:-1
position: 684138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684286:-1
position: 684286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:682788-682949:-1:exon

position:682788:-1
position: 682788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682949:-1
position: 682949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:681991-682049:-1:exon

position:681991:-1
position: 681991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682049:-1
position: 682049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:681184-681289:-1:exon

position:681184:-1
position: 681184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681289:-1
position: 681289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:680146-680268:-1:exon

position:680146:-1
position: 680146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680268:-1
position: 680268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:679493-679656:-1:exon

position:679493:-1
position: 679493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679656:-1
position: 679656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:678384-678472:-1:exon

position:678384:-1
position: 678384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678472:-1
position: 678472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:676849-677820:-1:exon

position:677820:-1
position: 677820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100544306
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544306
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein HIRA
translation: MQDQSGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMAPVLKEEDEKNENIPKMLCQMDNHLACVNCVRWSNNGVYLASGGDDKLIMVWKRAAYIGPSTVFGSSSKLTNVEQWRCVSILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLKGHSGLVKGLTWDPVGKYIASQADDRSLKVWRTMDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSAHAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSTKSSCPYCCCAVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLDFSQDELGDPLSEEEKSNIHQSTYGKSLAIMTEAQLSTTIIENPEMLKYQQRQQQQQAEQKNASVREASGAATTAPKVASMVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSTAFFNSIPISGTLAGSIMSSQNNQQLMSLDSNAANSLNTSKPSAEPTAASIKPTDDAANKDGVNATSVSTAPPASSSSVLTTPSKIEPMKAFDSRFTERSKATSGTAIITNTNQTVVDRLKDQNLIKDNKPKDILESSSDSEEKIPAAKPLSAPKRKLELEGETVEKKKKGRPRKDSRLVPVTLTVQSPAALASEKDAACISAPALALKLPTPIPQKSFTLQVSSDPSMYLEVENEMTTVGGSKLSRLKCNREGKEWETVLTSRILTAAGSCEIVCVACEKRTLSVFSACGRRLLPPIILNTPISTLHCTGSYIMTLTTAATLSVWDVHKQTVIVRDESLQTILSGSDTTVSQILLTQHGIPVMSMSDGKAYCFNPSLSTWNLVSDKQDSLAQCADFRSSLPSQEAMLCSGPLAVIQGRTSNSGRQAARLFSMPHLVQQETTLAYLENQIAAALMLQSSHEYRHWLLIYARYLVNEGFEYRLRELCKDLLGPVHYSAGSQWESTVMGLRKRELLKELLPVIGQNLRFQRLFTEYQEQLDILRDK
SIO_010081: LOC100544306
subclass of: SO_0000673
so part of: LOC100544306
location: complement(join(677704..677820,678384..678472,679493..679656,680146..680268,681184..681289,681991..682049,682788..682949,684138..684286,685089..685193,685899..686103,687237..687407,688794..688988,689358..689443,689777..690004,690571..690676,692990..693060,694774..694887,695413..695580,696428..696588,697539..697634,697959..698053,698570..698660,699416..699526,700235..700297,702883..702898))
location: region:677704-702898:-1
so has part: feature:702883-702898:-1:exon
so has part: feature:700235-700297:-1:exon
so has part: feature:699416-699526:-1:exon
so has part: feature:698570-698660:-1:exon
so has part: feature:697959-698053:-1:exon
so has part: feature:697539-697634:-1:exon
so has part: feature:696428-696588:-1:exon
so has part: feature:695413-695580:-1:exon
so has part: feature:694774-694887:-1:exon
so has part: feature:692990-693060:-1:exon
so has part: feature:690571-690676:-1:exon
so has part: feature:689777-690004:-1:exon
so has part: feature:689358-689443:-1:exon
so has part: feature:688794-688988:-1:exon
so has part: feature:687237-687407:-1:exon
so has part: feature:685899-686103:-1:exon
so has part: feature:685089-685193:-1:exon
so has part: feature:684138-684286:-1:exon
so has part: feature:682788-682949:-1:exon
so has part: feature:681991-682049:-1:exon
so has part: feature:681184-681289:-1:exon
so has part: feature:680146-680268:-1:exon
so has part: feature:679493-679656:-1:exon
so has part: feature:678384-678472:-1:exon
so has part: feature:677704-677820:-1:exon

XP_019476502.1
type: Protein
SIO_000068: ncbiprotein

position:677704:-1
position: 677704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702898:-1
position: 702898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:702883-702898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:700235-700297:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:699416-699526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:698570-698660:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:697959-698053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:697539-697634:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:696428-696588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:695413-695580:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:694774-694887:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:692990-693060:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:690571-690676:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:689777-690004:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:689358-689443:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:688794-688988:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:687237-687407:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685899-686103:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:685089-685193:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:684138-684286:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:682788-682949:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:681991-682049:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:681184-681289:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:680146-680268:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:679493-679656:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:678384-678472:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:677704-677820:-1:exon

MRPL40
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MRPL40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <704793..706719
location: region:704793-706719:1
so has part: feature:704793-706719:1:exon
subclass of: SO_0000010

104913546
type: Gene
SIO_000068: ncbigene

position:704793:1
position: 704793
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:706719:1
position: 706719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704793-706719:1:exon

MRPL40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MRPL40
product: mitochondrial ribosomal protein L40
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010720228.3
SIO_010081: MRPL40
subclass of: SO_0000673
so part of: MRPL40
location: join(<704793..704824,705721..705876,706211..706719)
location: region:704793-706719:1
so has part: feature:704793-704824:1:exon
so has part: feature:705721-705876:1:exon
so has part: feature:706211-706719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704793-704824:1:exon

position:704824:1
position: 704824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:705721-705876:1:exon

position:705721:1
position: 705721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705876:1
position: 705876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:706211-706719:1:exon

position:706211:1
position: 706211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MRPL40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L40, mitochondrial
translation: VLAGTASLPARAQPKKKKKVDPKREQAQKDRVKKKIKKLEKAAPELIPIEDFQTPLKFSDSNRVRSLPPLSFEETERRILLMKKWSLYKQQQDKAEKEAIRSLVEAQQEALKELRLESEELYQAAVRRDEKLFPFERDGPDYTPALPGYDPPEGKCIDITKVYTQ
SIO_010081: MRPL40
subclass of: SO_0000673
so part of: MRPL40
location: join(<704793..704824,705721..705876,706211..706520)
location: region:704793-706520:1
so has part: feature:704793-704824:1:exon
so has part: feature:705721-705876:1:exon
so has part: feature:706211-706520:1:exon

XP_010718530.1
type: Protein
SIO_000068: ncbiprotein

position:706520:1
position: 706520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704793-704824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:705721-705876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706211-706520:1:exon

UFD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: UFD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(708220..713604)
location: region:708220-713604:-1
so has part: feature:708220-713604:-1:exon
subclass of: SO_0000010

104913522
type: Gene
SIO_000068: ncbigene

position:708220:-1
position: 708220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713604:-1
position: 713604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:708220-713604:-1:exon

UFD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UFD1
product: ubiquitin recognition factor in ER associated degradation 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010719966.3
SIO_010081: UFD1
subclass of: SO_0000673
so part of: UFD1
location: complement(join(708220..708868,709272..709353,709441..709529,709879..709926,710215..710280,710822..710890,711574..711646,712049..712179,712510..712631,713483..713604))
location: region:708220-713604:-1
so has part: feature:713483-713604:-1:exon
so has part: feature:712510-712631:-1:exon
so has part: feature:712049-712179:-1:exon
so has part: feature:711574-711646:-1:exon
so has part: feature:710822-710890:-1:exon
so has part: feature:710215-710280:-1:exon
so has part: feature:709879-709926:-1:exon
so has part: feature:709441-709529:-1:exon
so has part: feature:709272-709353:-1:exon
so has part: feature:708220-708868:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:713483-713604:-1:exon

position:713483:-1
position: 713483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:712510-712631:-1:exon

position:712510:-1
position: 712510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712631:-1
position: 712631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:712049-712179:-1:exon

position:712049:-1
position: 712049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712179:-1
position: 712179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:711574-711646:-1:exon

position:711574:-1
position: 711574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711646:-1
position: 711646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710822-710890:-1:exon

position:710822:-1
position: 710822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710890:-1
position: 710890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:710215-710280:-1:exon

position:710215:-1
position: 710215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710280:-1
position: 710280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:709879-709926:-1:exon

position:709879:-1
position: 709879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709926:-1
position: 709926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:709441-709529:-1:exon

position:709441:-1
position: 709441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709529:-1
position: 709529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:709272-709353:-1:exon

position:709272:-1
position: 709272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709353:-1
position: 709353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:708220-708868:-1:exon

position:708868:-1
position: 708868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UFD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UFD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin recognition factor in ER-associated degradation protein 1
translation: MPPSALDQLSRLNITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLQVATYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAVSIIECDMNVDFDAPLGYKEPERSAQHEETTDVEADHSGYVSDVGFRAFSGSGNRLDGKKKGVEPSPSPIKPGDIRRGIPNYDFKIGRITFIRNSRPLVKKVEEDEAGSRFIAFSGEGQSLRKKGRKP
SIO_010081: UFD1
subclass of: SO_0000673
so part of: UFD1
location: complement(join(708794..708868,709272..709353,709441..709529,709879..709926,710215..710280,710822..710890,711574..711646,712049..712179,712510..712631,713483..713510))
location: region:708794-713510:-1
so has part: feature:713483-713510:-1:exon
so has part: feature:712510-712631:-1:exon
so has part: feature:712049-712179:-1:exon
so has part: feature:711574-711646:-1:exon
so has part: feature:710822-710890:-1:exon
so has part: feature:710215-710280:-1:exon
so has part: feature:709879-709926:-1:exon
so has part: feature:709441-709529:-1:exon
so has part: feature:709272-709353:-1:exon
so has part: feature:708794-708868:-1:exon

XP_010718268.1
type: Protein
SIO_000068: ncbiprotein

position:708794:-1
position: 708794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713510:-1
position: 713510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713483-713510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:712510-712631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:712049-712179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:711574-711646:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710822-710890:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:710215-710280:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:709879-709926:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:709441-709529:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:709272-709353:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:708794-708868:-1:exon

CDC45
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CDC45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <714738..726065
location: region:714738-726065:1
so has part: feature:714738-726065:1:exon
subclass of: SO_0000010

100544463
type: Gene
SIO_000068: ncbigene

position:714738:1
position: 714738
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:726065:1
position: 726065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714738-726065:1:exon

CDC45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CDC45
product: cell division cycle 45
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 188 samples with support for all annotated introns
transcript id: XM_031555921.1
SIO_010081: CDC45
subclass of: SO_0000673
so part of: CDC45
location: join(<714738..714830,715104..715196,715627..715764,716281..716424,717591..717646,718117..718165,718866..718927,719246..719296,720053..720172,720550..720681,721081..721179,721439..721600,721795..721933,722317..722400,722595..722713,723005..723081,723852..723918,725055..726065)
location: region:714738-726065:1
so has part: feature:714738-714830:1:exon
so has part: feature:715104-715196:1:exon
so has part: feature:715627-715764:1:exon
so has part: feature:716281-716424:1:exon
so has part: feature:717591-717646:1:exon
so has part: feature:718117-718165:1:exon
so has part: feature:718866-718927:1:exon
so has part: feature:719246-719296:1:exon
so has part: feature:720053-720172:1:exon
so has part: feature:720550-720681:1:exon
so has part: feature:721081-721179:1:exon
so has part: feature:721439-721600:1:exon
so has part: feature:721795-721933:1:exon
so has part: feature:722317-722400:1:exon
so has part: feature:722595-722713:1:exon
so has part: feature:723005-723081:1:exon
so has part: feature:723852-723918:1:exon
so has part: feature:725055-726065:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:714738-714830:1:exon

position:714830:1
position: 714830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:715104-715196:1:exon

position:715104:1
position: 715104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715196:1
position: 715196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:715627-715764:1:exon

position:715627:1
position: 715627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:715764:1
position: 715764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:716281-716424:1:exon

position:716281:1
position: 716281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:716424:1
position: 716424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:717591-717646:1:exon

position:717591:1
position: 717591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717646:1
position: 717646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:718117-718165:1:exon

position:718117:1
position: 718117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718165:1
position: 718165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:718866-718927:1:exon

position:718866:1
position: 718866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718927:1
position: 718927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:719246-719296:1:exon

position:719246:1
position: 719246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719296:1
position: 719296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:720053-720172:1:exon

position:720053:1
position: 720053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720172:1
position: 720172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:720550-720681:1:exon

position:720550:1
position: 720550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:720681:1
position: 720681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:721081-721179:1:exon

position:721081:1
position: 721081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721179:1
position: 721179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:721439-721600:1:exon

position:721439:1
position: 721439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721600:1
position: 721600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:721795-721933:1:exon

position:721795:1
position: 721795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:721933:1
position: 721933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:722317-722400:1:exon

position:722317:1
position: 722317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722400:1
position: 722400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:722595-722713:1:exon

position:722595:1
position: 722595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722713:1
position: 722713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:723005-723081:1:exon

position:723005:1
position: 723005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723081:1
position: 723081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:723852-723918:1:exon

position:723852:1
position: 723852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723918:1
position: 723918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:725055-726065:1:exon

position:725055:1
position: 725055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDC45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CDC45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division control protein 45 homolog
translation: HINAVALLFFQRVLLLVASDVDALCACKILQALFQCDHVQYTLVPVSGWQELETAFLEHKDQFKYFVFINCGANVDLLEILQPEEDTYFFVCDSHRPINIVNVYNETQIKLLVKQDDDLDVPAYDDIFRDEEDEEEDSENESDGSEPSDKRRRFEEEVIERTMKRRQRREWEARRREILFDYEQYEYHGTSSAMVMFDLAWIMSKDLNDMLWWAIVGLTDQWVQDKITQMKYVTDIGILQRHVSRHNHRNEDEENSLSIDCMRIAFEYDLRLALYQHWSLYESLCNTSYTSANLKLWSVQGQKRLQEFLADMGLPLKQVKQKFNSMDISLKENLREMIEESANKFGMRDLRVQTFSIHFGFKNKFLASDIVYATASLMESIEKEGPETTNFIKALDSLSRGNLDKLHQGLDLAKKQLRAIQQTVASCICTNLVISQGPFLYCSLMEGTPDVKLFSKPVSLCLLSKYLLKSFVCSTKNKRCKLLPLVMAAPMDVEQGTVIMVGIPPETESSDKKNFFGRAFEKAADSTNSRTLHNHFDMSIIELKTEDRSKFLDALISLLS
SIO_010081: CDC45
subclass of: SO_0000673
so part of: CDC45
location: join(<714738..714830,715104..715196,715627..715764,716281..716424,717591..717646,718117..718165,718866..718927,719246..719296,720053..720172,720550..720681,721081..721179,721439..721600,721795..721933,722317..722400,722595..722713,723005..723081,723852..723916)
location: region:714738-723916:1
so has part: feature:714738-714830:1:exon
so has part: feature:715104-715196:1:exon
so has part: feature:715627-715764:1:exon
so has part: feature:716281-716424:1:exon
so has part: feature:717591-717646:1:exon
so has part: feature:718117-718165:1:exon
so has part: feature:718866-718927:1:exon
so has part: feature:719246-719296:1:exon
so has part: feature:720053-720172:1:exon
so has part: feature:720550-720681:1:exon
so has part: feature:721081-721179:1:exon
so has part: feature:721439-721600:1:exon
so has part: feature:721795-721933:1:exon
so has part: feature:722317-722400:1:exon
so has part: feature:722595-722713:1:exon
so has part: feature:723005-723081:1:exon
so has part: feature:723852-723916:1:exon

XP_031411781.1
type: Protein
SIO_000068: ncbiprotein

position:723916:1
position: 723916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714738-714830:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715104-715196:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715627-715764:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:716281-716424:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:717591-717646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:718117-718165:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:718866-718927:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:719246-719296:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:720053-720172:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:720550-720681:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:721081-721179:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:721439-721600:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:721795-721933:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:722317-722400:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:722595-722713:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:723005-723081:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:723852-723916:1:exon

LOC100544620
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 753199..780062
location: region:753199-780062:1
so has part: feature:753199-780062:1:exon
subclass of: SO_0000010

100544620
type: Gene
SIO_000068: ncbigene

position:753199:1
position: 753199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780062:1
position: 780062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753199-780062:1:exon

LOC100544620
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: LOC100544620
product: septin-2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XR_795434.1
SIO_010081: LOC100544620
so part of: LOC100544620
location: join(753199..753256,753352..753451,754615..754701,755335..755458,758771..758905,759336..759453,763595..763696,764562..764707,765693..765776,766718..766775,771597..771690,772869..772915,779268..780062)
location: region:753199-780062:1
so has part: feature:753199-753256:1:exon
so has part: feature:753352-753451:1:exon
so has part: feature:754615-754701:1:exon
so has part: feature:755335-755458:1:exon
so has part: feature:758771-758905:1:exon
so has part: feature:759336-759453:1:exon
so has part: feature:763595-763696:1:exon
so has part: feature:764562-764707:1:exon
so has part: feature:765693-765776:1:exon
so has part: feature:766718-766775:1:exon
so has part: feature:771597-771690:1:exon
so has part: feature:772869-772915:1:exon
so has part: feature:779268-780062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753199-753256:1:exon

position:753256:1
position: 753256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:753352-753451:1:exon

position:753352:1
position: 753352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753451:1
position: 753451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:754615-754701:1:exon

position:754615:1
position: 754615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754701:1
position: 754701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:755335-755458:1:exon

position:755335:1
position: 755335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755458:1
position: 755458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:758771-758905:1:exon

position:758771:1
position: 758771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758905:1
position: 758905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:759336-759453:1:exon

position:759336:1
position: 759336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759453:1
position: 759453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:763595-763696:1:exon

position:763595:1
position: 763595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763696:1
position: 763696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:764562-764707:1:exon

position:764562:1
position: 764562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:764707:1
position: 764707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:765693-765776:1:exon

position:765693:1
position: 765693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:765776:1
position: 765776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:766718-766775:1:exon

position:766718:1
position: 766718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:766775:1
position: 766775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:771597-771690:1:exon

position:771597:1
position: 771597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771690:1
position: 771690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:772869-772915:1:exon

position:772869:1
position: 772869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:772915:1
position: 772915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:779268-780062:1:exon

position:779268:1
position: 779268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100544620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544620
product: septin-2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010719969.1
SIO_010081: LOC100544620
subclass of: SO_0000673
so part of: LOC100544620
location: join(753199..753256,753352..753451,754615..754701,755335..755458,758771..758905,759336..759453,763595..763696,764562..764707,765693..765776,766718..766775,771597..771690,779268..780062)
location: region:753199-780062:1
so has part: feature:753199-753256:1:exon
so has part: feature:753352-753451:1:exon
so has part: feature:754615-754701:1:exon
so has part: feature:755335-755458:1:exon
so has part: feature:758771-758905:1:exon
so has part: feature:759336-759453:1:exon
so has part: feature:763595-763696:1:exon
so has part: feature:764562-764707:1:exon
so has part: feature:765693-765776:1:exon
so has part: feature:766718-766775:1:exon
so has part: feature:771597-771690:1:exon
so has part: feature:779268-780062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753199-753256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753352-753451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754615-754701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755335-755458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:758771-758905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759336-759453:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763595-763696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764562-764707:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:765693-765776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:766718-766775:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:771597-771690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:779268-780062:1:exon

LOC100544620
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544620
product: septin-2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010719970.1
SIO_010081: LOC100544620
subclass of: SO_0000673
so part of: LOC100544620
location: join(753199..753256,753352..753451,754615..754701,755335..755458,758771..758905,759336..759453,763595..763696,764562..764707,765693..765776,766718..766775,771597..771690,779271..780062)
location: region:753199-780062:1
so has part: feature:753199-753256:1:exon
so has part: feature:753352-753451:1:exon
so has part: feature:754615-754701:1:exon
so has part: feature:755335-755458:1:exon
so has part: feature:758771-758905:1:exon
so has part: feature:759336-759453:1:exon
so has part: feature:763595-763696:1:exon
so has part: feature:764562-764707:1:exon
so has part: feature:765693-765776:1:exon
so has part: feature:766718-766775:1:exon
so has part: feature:771597-771690:1:exon
so has part: feature:779271-780062:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:753199-753256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753352-753451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754615-754701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755335-755458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:758771-758905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759336-759453:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763595-763696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764562-764707:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:765693-765776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:766718-766775:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:771597-771690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:779271-780062:1:exon

position:779271:1
position: 779271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100544620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2
translation: MSQSGEKVKFSDSAGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERYIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINSQDCFKTIIQYIDNQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVEFMKALHGKVNIVPVIAKADTLTLKERERLKRRVLDEISEHGIRIYQLPDADSDEDEEFKEQTRVLKASIPFAVIGSNQLIEVKGKKIRGRLYPWGVVEVENPEHNDFLKLRTMLVTHMQDLQEVTQDLHYENFRSERLKRTGKPVEEEVVDKDRILQQKEAELRRMQEMIAQMQAQMRMKPGDD
SIO_010081: LOC100544620
subclass of: SO_0000673
so part of: LOC100544620
location: join(753230..753256,753352..753451,754615..754701,755335..755458,758771..758905,759336..759453,763595..763696,764562..764707,765693..765776,766718..766775,771597..771665)
location: region:753230-771665:1
so has part: feature:753230-753256:1:exon
so has part: feature:753352-753451:1:exon
so has part: feature:754615-754701:1:exon
so has part: feature:755335-755458:1:exon
so has part: feature:758771-758905:1:exon
so has part: feature:759336-759453:1:exon
so has part: feature:763595-763696:1:exon
so has part: feature:764562-764707:1:exon
so has part: feature:765693-765776:1:exon
so has part: feature:766718-766775:1:exon
so has part: feature:771597-771665:1:exon

XP_010718271.1
type: Protein
SIO_000068: ncbiprotein

position:753230:1
position: 753230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:771665:1
position: 771665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753230-753256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753352-753451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754615-754701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755335-755458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:758771-758905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759336-759453:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763595-763696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764562-764707:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:765693-765776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:766718-766775:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:771597-771665:1:exon

LOC100544620
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544620
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-2
translation: MSQSGEKVKFSDSAGYVGFANLPNQVHRKSVKKGFEFTLMVVGESGLGKSTLINSLFLTDLYPERYIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDTPGYGDAINSQDCFKTIIQYIDNQFERYLHDESGLNRRHIIDNRVHCCFYFISPFGHGLKPLDVEFMKALHGKVNIVPVIAKADTLTLKERERLKRRVLDEISEHGIRIYQLPDADSDEDEEFKEQTRVLKASIPFAVIGSNQLIEVKGKKIRGRLYPWGVVEVENPEHNDFLKLRTMLVTHMQDLQEVTQDLHYENFRSERLKRTGKPVEEEVVDKDRILQQKEAELRRMQEMIAQMQAQMRMKPGDD
SIO_010081: LOC100544620
subclass of: SO_0000673
so part of: LOC100544620
location: join(753230..753256,753352..753451,754615..754701,755335..755458,758771..758905,759336..759453,763595..763696,764562..764707,765693..765776,766718..766775,771597..771665)
location: region:753230-771665:1
so has part: feature:753230-753256:1:exon
so has part: feature:753352-753451:1:exon
so has part: feature:754615-754701:1:exon
so has part: feature:755335-755458:1:exon
so has part: feature:758771-758905:1:exon
so has part: feature:759336-759453:1:exon
so has part: feature:763595-763696:1:exon
so has part: feature:764562-764707:1:exon
so has part: feature:765693-765776:1:exon
so has part: feature:766718-766775:1:exon
so has part: feature:771597-771665:1:exon

XP_010718272.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:753230-753256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753352-753451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754615-754701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:755335-755458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:758771-758905:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759336-759453:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:763595-763696:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:764562-764707:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:765693-765776:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:766718-766775:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:771597-771665:1:exon

SEPTIN5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SEPTIN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 808868..818940
location: region:808868-818940:1
so has part: feature:808868-818940:1:exon
subclass of: SO_0000010

100544775
type: Gene
SIO_000068: ncbigene

position:808868:1
position: 808868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818940:1
position: 818940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808868-818940:1:exon

SEPTIN5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SEPTIN5
product: septin 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_031555922.1
SIO_010081: SEPTIN5
subclass of: SO_0000673
so part of: SEPTIN5
location: join(808868..808964,809308..809394,809956..810079,810231..810365,811030..811147,811475..811576,812072..812168,813433..813568,815005..815107,815255..818940)
location: region:808868-818940:1
so has part: feature:808868-808964:1:exon
so has part: feature:809308-809394:1:exon
so has part: feature:809956-810079:1:exon
so has part: feature:810231-810365:1:exon
so has part: feature:811030-811147:1:exon
so has part: feature:811475-811576:1:exon
so has part: feature:812072-812168:1:exon
so has part: feature:813433-813568:1:exon
so has part: feature:815005-815107:1:exon
so has part: feature:815255-818940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:808868-808964:1:exon

position:808964:1
position: 808964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:809308-809394:1:exon

position:809308:1
position: 809308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809394:1
position: 809394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:809956-810079:1:exon

position:809956:1
position: 809956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810079:1
position: 810079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:810231-810365:1:exon

position:810231:1
position: 810231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810365:1
position: 810365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:811030-811147:1:exon

position:811030:1
position: 811030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811147:1
position: 811147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:811475-811576:1:exon

position:811475:1
position: 811475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811576:1
position: 811576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:812072-812168:1:exon

position:812072:1
position: 812072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812168:1
position: 812168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:813433-813568:1:exon

position:813433:1
position: 813433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813568:1
position: 813568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:815005-815107:1:exon

position:815005:1
position: 815005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815107:1
position: 815107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:815255-818940:1:exon

position:815255:1
position: 815255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEPTIN5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SEPTIN5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-5
translation: MVAGESGLGKSTLVNSLFLTDLYKDRKLLNAEERINQTVEIVKHTVDIEEKGVKLKLTIVDTPGFGDAVNNTECWKPITDYIDQQFEQYFRDESGLNRKNIQDNRVHCCLYFISPFGHGLRPVDVEFMKALHEKVNIVPLIAKADCLIPSEIRKLKERIREEIDKFGIKVYQFPECDSDEDEEFKQQDRELKESAPFAVIGSNTVVEAKGQRVRGRLYPWGIVEVENQAHCDFVKLRNMLIRTHMHDLKDVTCDVHYENYRAQCIQQMTSKLTQDNRIESPIPILPLPTPDTETEKLIKMKDEELRRMQEMLQKMQQQMQDQ
SIO_010081: SEPTIN5
subclass of: SO_0000673
so part of: SEPTIN5
location: join(808955..808964,809308..809394,809956..810079,810231..810365,811030..811147,811475..811576,812072..812168,813433..813568,815005..815107,815255..815311)
location: region:808955-815311:1
so has part: feature:808955-808964:1:exon
so has part: feature:809308-809394:1:exon
so has part: feature:809956-810079:1:exon
so has part: feature:810231-810365:1:exon
so has part: feature:811030-811147:1:exon
so has part: feature:811475-811576:1:exon
so has part: feature:812072-812168:1:exon
so has part: feature:813433-813568:1:exon
so has part: feature:815005-815107:1:exon
so has part: feature:815255-815311:1:exon

XP_031411782.1
type: Protein
SIO_000068: ncbiprotein

position:808955:1
position: 808955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815311:1
position: 815311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:808955-808964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:809308-809394:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:809956-810079:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:810231-810365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811030-811147:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:811475-811576:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:812072-812168:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:813433-813568:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:815005-815107:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:815255-815311:1:exon

GP1BB
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GP1BB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 819928..823427
location: region:819928-823427:1
so has part: feature:819928-823427:1:exon
subclass of: SO_0000010

100544927
type: Gene
SIO_000068: ncbigene

position:819928:1
position: 819928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:823427:1
position: 823427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819928-823427:1:exon

GP1BB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GP1BB
product: glycoprotein Ib platelet subunit beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 147 samples with support for all annotated introns
transcript id: XM_010719975.3
SIO_010081: GP1BB
subclass of: SO_0000673
so part of: GP1BB
location: join(819928..821362,822004..823427)
location: region:819928-823427:1
so has part: feature:819928-821362:1:exon
so has part: feature:822004-823427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:819928-821362:1:exon

position:821362:1
position: 821362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:822004-823427:1:exon

position:822004:1
position: 822004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GP1BB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GP1BB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet glycoprotein Ib beta chain
translation: MKMNSGILFLSLLGFLPVVIPTCPPPCKCATSIIDCMSKGLTVTKLPVAFRPSAEIINLSYNRLTSIPSGLFDNLKSLQTVHLQGNPWECNCDILYLRSWLQWQQNRTFYRDVRCASPAHLQGRVIAYLAEDEIISTCQYWYCTLALFSQLVLIIFLLLQAILVIFIIIYLQRFRRTAAEARSTTRDLYQHADTWSLQEQ
SIO_010081: GP1BB
subclass of: SO_0000673
so part of: GP1BB
location: 822073..822675
location: region:822073-822675:1
so has part: feature:822073-822675:1:exon

XP_010718277.1
type: Protein
SIO_000068: ncbiprotein

position:822073:1
position: 822073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:822675:1
position: 822675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822073-822675:1:exon

LOC109370302
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370302
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 857745..961325
location: region:857745-961325:1
so has part: feature:857745-961325:1:exon
subclass of: SO_0000011

109370302
type: Gene
SIO_000068: ncbigene

position:857745:1
position: 857745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961325:1
position: 961325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:857745-961325:1:exon

LOC109370302
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370302
product: uncharacterized LOC109370302, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161549.1
SIO_010081: LOC109370302
subclass of: SO_0000673
so part of: LOC109370302
location: join(857745..858024,953809..953887,955074..961325)
location: region:857745-961325:1
so has part: feature:857745-858024:1:exon
so has part: feature:953809-953887:1:exon
so has part: feature:955074-961325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:857745-858024:1:exon

position:858024:1
position: 858024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:953809-953887:1:exon

position:953809:1
position: 953809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953887:1
position: 953887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:955074-961325:1:exon

position:955074:1
position: 955074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109370302
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370302
product: uncharacterized LOC109370302, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161550.1
SIO_010081: LOC109370302
subclass of: SO_0000673
so part of: LOC109370302
location: join(857745..858024,953809..953887,957608..961325)
location: region:857745-961325:1
so has part: feature:857745-858024:1:exon
so has part: feature:953809-953887:1:exon
so has part: feature:957608-961325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:857745-858024:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:953809-953887:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957608-961325:1:exon

position:957608:1
position: 957608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNB1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GNB1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(978441..1016845)
location: region:978441-1016845:-1
so has part: feature:978441-1016845:-1:exon
subclass of: SO_0000010

100545695
type: Gene
SIO_000068: ncbigene

position:978441:-1
position: 978441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016845:-1
position: 1016845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978441-1016845:-1:exon

GNB1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GNB1L
product: G protein subunit beta 1 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019620959.2
SIO_010081: GNB1L
subclass of: SO_0000673
so part of: GNB1L
location: complement(join(978441..982720,987565..987801,992411..992509,996243..996405,998133..998258,998461..998628,1016746..1016842))
location: region:978441-1016842:-1
so has part: feature:1016746-1016842:-1:exon
so has part: feature:998461-998628:-1:exon
so has part: feature:998133-998258:-1:exon
so has part: feature:996243-996405:-1:exon
so has part: feature:992411-992509:-1:exon
so has part: feature:987565-987801:-1:exon
so has part: feature:978441-982720:-1:exon

position:1016842:-1
position: 1016842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016746-1016842:-1:exon

position:1016746:-1
position: 1016746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:998461-998628:-1:exon

position:998461:-1
position: 998461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998628:-1
position: 998628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:998133-998258:-1:exon

position:998133:-1
position: 998133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998258:-1
position: 998258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:996243-996405:-1:exon

position:996243:-1
position: 996243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996405:-1
position: 996405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:992411-992509:-1:exon

position:992411:-1
position: 992411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992509:-1
position: 992509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:987565-987801:-1:exon

position:987565:-1
position: 987565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987801:-1
position: 987801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:978441-982720:-1:exon

position:982720:-1
position: 982720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNB1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GNB1L
product: G protein subunit beta 1 like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019620961.2
SIO_010081: GNB1L
subclass of: SO_0000673
so part of: GNB1L
location: complement(join(978441..982720,987565..987780,992411..992509,996243..996405,998133..998258,998461..998628,1016746..1016840))
location: region:978441-1016840:-1
so has part: feature:1016746-1016840:-1:exon
so has part: feature:998461-998628:-1:exon
so has part: feature:998133-998258:-1:exon
so has part: feature:996243-996405:-1:exon
so has part: feature:992411-992509:-1:exon
so has part: feature:987565-987780:-1:exon
so has part: feature:978441-982720:-1:exon

position:1016840:-1
position: 1016840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016746-1016840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:998461-998628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998133-998258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:996243-996405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992411-992509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:987565-987780:-1:exon

position:987780:-1
position: 987780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:978441-982720:-1:exon

GNB1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GNB1L
product: G protein subunit beta 1 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019620960.2
SIO_010081: GNB1L
subclass of: SO_0000673
so part of: GNB1L
location: complement(join(978441..982720,987565..987801,992411..992509,996243..996405,998133..998258,998461..998628,1001130..1001222))
location: region:978441-1001222:-1
so has part: feature:1001130-1001222:-1:exon
so has part: feature:998461-998628:-1:exon
so has part: feature:998133-998258:-1:exon
so has part: feature:996243-996405:-1:exon
so has part: feature:992411-992509:-1:exon
so has part: feature:987565-987801:-1:exon
so has part: feature:978441-982720:-1:exon

position:1001222:-1
position: 1001222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001130-1001222:-1:exon

position:1001130:-1
position: 1001130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:998461-998628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998133-998258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:996243-996405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992411-992509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:987565-987801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:978441-982720:-1:exon

GNB1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GNB1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein subunit beta-like protein 1 isoform X2
translation: MAQPPPDPRFVLRGTGAAVHALRFSCGGEEPAVPILFSGSENGFIHVWNLKTHRVDATLDGHGRKSVYWLETMDSKDRLLSQGRDQRICLWDLAEGRTAVMDSVFTENVGFCRSSLLKVAQGRWLMAMAAKTLEEVQVLELPSKTSVCTLKPEMGAKLGMPMCLKLWQGSCGSQPSLLAGYEDGSVLLWNLSTGKVLSQLICHQEPVMSLDFDSERAKGISGSSEKVLSIWSLNEQQNLQAQKTHRLVNAGISDITIRPDKKILATAGWDHRIRIFGWKKLKPLAVLDYHTATVHSVSFSDHKSPSDRLLAAGAKDHRISIWSIYTQT
SIO_010081: GNB1L
subclass of: SO_0000673
so part of: GNB1L
location: complement(join(982454..982720,987565..987780,992411..992509,996243..996405,998133..998258,998461..998576))
location: region:982454-998576:-1
so has part: feature:998461-998576:-1:exon
so has part: feature:998133-998258:-1:exon
so has part: feature:996243-996405:-1:exon
so has part: feature:992411-992509:-1:exon
so has part: feature:987565-987780:-1:exon
so has part: feature:982454-982720:-1:exon

XP_019476506.1
type: Protein
SIO_000068: ncbiprotein

position:982454:-1
position: 982454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998576:-1
position: 998576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998461-998576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:998133-998258:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:996243-996405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:992411-992509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:987565-987780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982454-982720:-1:exon

GNB1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GNB1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein subunit beta-like protein 1 isoform X1
translation: MAQPPPDPRFVLRGTGAAVHALRFSCGGEEPAVPILFSGSENGFIHVWNLKTHRVDATLDGHGRKSVYWLETMDSKDRLLSQGRDQRICLWDLAEGRTAVMDSVFTENVGFCRSSLLKVAQGRWLMAMAAKTLEEVQVLELPSKTSVCTLKPEMGAKLGMPMCLKLWQFYFSLGQGSCGSQPSLLAGYEDGSVLLWNLSTGKVLSQLICHQEPVMSLDFDSERAKGISGSSEKVLSIWSLNEQQNLQAQKTHRLVNAGISDITIRPDKKILATAGWDHRIRIFGWKKLKPLAVLDYHTATVHSVSFSDHKSPSDRLLAAGAKDHRISIWSIYTQT
SIO_010081: GNB1L
subclass of: SO_0000673
so part of: GNB1L
location: complement(join(982454..982720,987565..987801,992411..992509,996243..996405,998133..998258,998461..998576))
location: region:982454-998576:-1
so has part: feature:998461-998576:-1:exon
so has part: feature:998133-998258:-1:exon
so has part: feature:996243-996405:-1:exon
so has part: feature:992411-992509:-1:exon
so has part: feature:987565-987801:-1:exon
so has part: feature:982454-982720:-1:exon

XP_019476504.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:998461-998576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:998133-998258:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:996243-996405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:992411-992509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:987565-987801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982454-982720:-1:exon

GNB1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GNB1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein subunit beta-like protein 1 isoform X1
translation: MAQPPPDPRFVLRGTGAAVHALRFSCGGEEPAVPILFSGSENGFIHVWNLKTHRVDATLDGHGRKSVYWLETMDSKDRLLSQGRDQRICLWDLAEGRTAVMDSVFTENVGFCRSSLLKVAQGRWLMAMAAKTLEEVQVLELPSKTSVCTLKPEMGAKLGMPMCLKLWQFYFSLGQGSCGSQPSLLAGYEDGSVLLWNLSTGKVLSQLICHQEPVMSLDFDSERAKGISGSSEKVLSIWSLNEQQNLQAQKTHRLVNAGISDITIRPDKKILATAGWDHRIRIFGWKKLKPLAVLDYHTATVHSVSFSDHKSPSDRLLAAGAKDHRISIWSIYTQT
SIO_010081: GNB1L
subclass of: SO_0000673
so part of: GNB1L
location: complement(join(982454..982720,987565..987801,992411..992509,996243..996405,998133..998258,998461..998576))
location: region:982454-998576:-1
so has part: feature:998461-998576:-1:exon
so has part: feature:998133-998258:-1:exon
so has part: feature:996243-996405:-1:exon
so has part: feature:992411-992509:-1:exon
so has part: feature:987565-987801:-1:exon
so has part: feature:982454-982720:-1:exon

XP_019476505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:998461-998576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:998133-998258:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:996243-996405:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:992411-992509:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:987565-987801:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:982454-982720:-1:exon

GNB1L
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: GNB1L
product: G protein subunit beta 1 like, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002120318.2
SIO_010081: GNB1L
so part of: GNB1L
location: complement(join(982632..982720,983558..983670,987565..987801,992411..992509,996243..996405,998133..998258,998461..998628,1016746..1016845))
location: region:982632-1016845:-1
so has part: feature:1016746-1016845:-1:exon
so has part: feature:998461-998628:-1:exon
so has part: feature:998133-998258:-1:exon
so has part: feature:996243-996405:-1:exon
so has part: feature:992411-992509:-1:exon
so has part: feature:987565-987801:-1:exon
so has part: feature:983558-983670:-1:exon
so has part: feature:982632-982720:-1:exon

position:982632:-1
position: 982632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016746-1016845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:998461-998628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998133-998258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:996243-996405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992411-992509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:987565-987801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983558-983670:-1:exon

position:983558:-1
position: 983558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983670:-1
position: 983670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:982632-982720:-1:exon

GNB1L
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: GNB1L
product: G protein subunit beta 1 like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002120316.2
SIO_010081: GNB1L
so part of: GNB1L
location: complement(join(982634..982720,983351..983496,987565..987801,992411..992509,996243..996405,998133..998258,998461..998628,1016746..1016845))
location: region:982634-1016845:-1
so has part: feature:1016746-1016845:-1:exon
so has part: feature:998461-998628:-1:exon
so has part: feature:998133-998258:-1:exon
so has part: feature:996243-996405:-1:exon
so has part: feature:992411-992509:-1:exon
so has part: feature:987565-987801:-1:exon
so has part: feature:983351-983496:-1:exon
so has part: feature:982634-982720:-1:exon

position:982634:-1
position: 982634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016746-1016845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:998461-998628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998133-998258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:996243-996405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992411-992509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:987565-987801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983351-983496:-1:exon

position:983351:-1
position: 983351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983496:-1
position: 983496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:982634-982720:-1:exon

GNB1L
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: GNB1L
product: G protein subunit beta 1 like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002120317.2
SIO_010081: GNB1L
so part of: GNB1L
location: complement(join(982634..982720,983351..983457,983558..983670,987565..987801,992411..992509,996243..996405,998133..998258,998461..998628,1016746..1016845))
location: region:982634-1016845:-1
so has part: feature:1016746-1016845:-1:exon
so has part: feature:998461-998628:-1:exon
so has part: feature:998133-998258:-1:exon
so has part: feature:996243-996405:-1:exon
so has part: feature:992411-992509:-1:exon
so has part: feature:987565-987801:-1:exon
so has part: feature:983558-983670:-1:exon
so has part: feature:983351-983457:-1:exon
so has part: feature:982634-982720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1016746-1016845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:998461-998628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:998133-998258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:996243-996405:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:992411-992509:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:987565-987801:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983558-983670:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:983351-983457:-1:exon

position:983457:-1
position: 983457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:982634-982720:-1:exon

LOC104913523
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1017502..1037391)
location: region:1017502-1037391:-1
so has part: feature:1017502-1037391:-1:exon
subclass of: SO_0000011

104913523
type: Gene
SIO_000068: ncbigene

position:1017502:-1
position: 1017502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037391:-1
position: 1037391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017502-1037391:-1:exon

LOC104913523
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913523
product: uncharacterized LOC104913523, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161552.1
SIO_010081: LOC104913523
subclass of: SO_0000673
so part of: LOC104913523
location: complement(join(1017502..1020665,1023724..1023932,1024811..1024964,1025673..1029915,1030243..1030431,1033738..1033886,1034518..1037391))
location: region:1017502-1037391:-1
so has part: feature:1034518-1037391:-1:exon
so has part: feature:1033738-1033886:-1:exon
so has part: feature:1030243-1030431:-1:exon
so has part: feature:1025673-1029915:-1:exon
so has part: feature:1024811-1024964:-1:exon
so has part: feature:1023724-1023932:-1:exon
so has part: feature:1017502-1020665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1034518-1037391:-1:exon

position:1034518:-1
position: 1034518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1033738-1033886:-1:exon

position:1033738:-1
position: 1033738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033886:-1
position: 1033886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1030243-1030431:-1:exon

position:1030243:-1
position: 1030243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030431:-1
position: 1030431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1025673-1029915:-1:exon

position:1025673:-1
position: 1025673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1029915:-1
position: 1029915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1024811-1024964:-1:exon

position:1024811:-1
position: 1024811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024964:-1
position: 1024964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1023724-1023932:-1:exon

position:1023724:-1
position: 1023724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023932:-1
position: 1023932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1017502-1020665:-1:exon

position:1020665:-1
position: 1020665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913523
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913523
product: uncharacterized LOC104913523, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002120320.1
SIO_010081: LOC104913523
subclass of: SO_0000673
so part of: LOC104913523
location: complement(join(1017502..1020665,1023724..1023932,1025686..1029915,1030243..1030431,1033738..1037391))
location: region:1017502-1037391:-1
so has part: feature:1033738-1037391:-1:exon
so has part: feature:1030243-1030431:-1:exon
so has part: feature:1025686-1029915:-1:exon
so has part: feature:1023724-1023932:-1:exon
so has part: feature:1017502-1020665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1033738-1037391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030243-1030431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025686-1029915:-1:exon

position:1025686:-1
position: 1025686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1023724-1023932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1017502-1020665:-1:exon

LOC104913523
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913523
product: uncharacterized LOC104913523, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002120319.1
SIO_010081: LOC104913523
subclass of: SO_0000673
so part of: LOC104913523
location: complement(join(1017502..1020665,1023724..1023932,1024811..1024964,1025686..1029915,1030243..1030431,1033738..1037391))
location: region:1017502-1037391:-1
so has part: feature:1033738-1037391:-1:exon
so has part: feature:1030243-1030431:-1:exon
so has part: feature:1025686-1029915:-1:exon
so has part: feature:1024811-1024964:-1:exon
so has part: feature:1023724-1023932:-1:exon
so has part: feature:1017502-1020665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1033738-1037391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030243-1030431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025686-1029915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024811-1024964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1023724-1023932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1017502-1020665:-1:exon

LOC104913523
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913523
product: uncharacterized LOC104913523, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161551.1
SIO_010081: LOC104913523
subclass of: SO_0000673
so part of: LOC104913523
location: complement(join(1017502..1020665,1023724..1023932,1024811..1024964,1025673..1029915,1030243..1030431,1033738..1037391))
location: region:1017502-1037391:-1
so has part: feature:1033738-1037391:-1:exon
so has part: feature:1030243-1030431:-1:exon
so has part: feature:1025673-1029915:-1:exon
so has part: feature:1024811-1024964:-1:exon
so has part: feature:1023724-1023932:-1:exon
so has part: feature:1017502-1020665:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1033738-1037391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1030243-1030431:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1025673-1029915:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1024811-1024964:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1023724-1023932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1017502-1020665:-1:exon

TXNRD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TXNRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1037548..1069282)
location: region:1037548-1069282:-1
so has part: feature:1037548-1069282:-1:exon
subclass of: SO_0000010

100546003
type: Gene
SIO_000068: ncbigene

position:1037548:-1
position: 1037548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069282:-1
position: 1069282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1037548-1069282:-1:exon

TXNRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TXNRD2
product: thioredoxin reductase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_003210867.4
SIO_010081: TXNRD2
subclass of: SO_0000673
so part of: TXNRD2
location: complement(join(1037548..1040102,1042295..1042392,1043482..1043553,1044830..1044922,1045137..1045232,1049991..1050127,1058928..1059102,1061244..1061335,1061699..1061718,1065329..1065399,1065881..1065943,1066636..1066714,1067522..1067596,1067906..1068050,1068289..1068345,1069023..1069260))
location: region:1037548-1069260:-1
so has part: feature:1069023-1069260:-1:exon
so has part: feature:1068289-1068345:-1:exon
so has part: feature:1067906-1068050:-1:exon
so has part: feature:1067522-1067596:-1:exon
so has part: feature:1066636-1066714:-1:exon
so has part: feature:1065881-1065943:-1:exon
so has part: feature:1065329-1065399:-1:exon
so has part: feature:1061699-1061718:-1:exon
so has part: feature:1061244-1061335:-1:exon
so has part: feature:1058928-1059102:-1:exon
so has part: feature:1049991-1050127:-1:exon
so has part: feature:1045137-1045232:-1:exon
so has part: feature:1044830-1044922:-1:exon
so has part: feature:1043482-1043553:-1:exon
so has part: feature:1042295-1042392:-1:exon
so has part: feature:1037548-1040102:-1:exon

position:1069260:-1
position: 1069260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069023-1069260:-1:exon

position:1069023:-1
position: 1069023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1068289-1068345:-1:exon

position:1068289:-1
position: 1068289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068345:-1
position: 1068345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1067906-1068050:-1:exon

position:1067906:-1
position: 1067906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068050:-1
position: 1068050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1067522-1067596:-1:exon

position:1067522:-1
position: 1067522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067596:-1
position: 1067596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1066636-1066714:-1:exon

position:1066636:-1
position: 1066636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066714:-1
position: 1066714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1065881-1065943:-1:exon

position:1065881:-1
position: 1065881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065943:-1
position: 1065943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1065329-1065399:-1:exon

position:1065329:-1
position: 1065329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065399:-1
position: 1065399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1061699-1061718:-1:exon

position:1061699:-1
position: 1061699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061718:-1
position: 1061718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1061244-1061335:-1:exon

position:1061244:-1
position: 1061244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1061335:-1
position: 1061335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1058928-1059102:-1:exon

position:1058928:-1
position: 1058928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059102:-1
position: 1059102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1049991-1050127:-1:exon

position:1049991:-1
position: 1049991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1050127:-1
position: 1050127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1045137-1045232:-1:exon

position:1045137:-1
position: 1045137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1045232:-1
position: 1045232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1044830-1044922:-1:exon

position:1044830:-1
position: 1044830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1044922:-1
position: 1044922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1043482-1043553:-1:exon

position:1043482:-1
position: 1043482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1043553:-1
position: 1043553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1042295-1042392:-1:exon

position:1042295:-1
position: 1042295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042392:-1
position: 1042392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1037548-1040102:-1:exon

position:1040102:-1
position: 1040102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TXNRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TXNRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin reductase 2, mitochondrial isoform X1
translation: MYLFIFAFNTSLLSFLSVSFFFSPPNFSTGKEYDLLVIGGGSGGLACAKEAAQFGKKVAVLDYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMAHPVHHSWSVMAQAVQNYVKSLNWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGGKKTTLTAEKIVIATGGRPKYPTHITGALEYGITSDDLFWLKDSPGKTLVVGASYVSLECAGFLTGVGLDTAVMMRSIPLRGFDQQMASLVTEHMESYGTKFLKKCVPMKVEKLESGRLQVTWKNTDLGTEEMDSFDTVMWAVGRVPDSETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAIGDITEGRPELTPTAIAAGKLLARRLFGHSSELMDYDNVPTTVFTPLEYGCVGLSEEKAVQCYGSDNVEVFHAYYKPLEFTVAERDAAQCYMKMVCLREREQRILGLHFIGPNAGEVIQGFALGIKCGATYPQLMKTIGIHPTCAEEITKLHITKRSGLDATVTGC
SIO_010081: TXNRD2
subclass of: SO_0000673
so part of: TXNRD2
location: complement(join(1039979..1040102,1042295..1042392,1043482..1043553,1044830..1044922,1045137..1045232,1049991..1050127,1058928..1059102,1061244..1061335,1061699..1061718,1065329..1065399,1065881..1065943,1066636..1066714,1067522..1067596,1067906..1068050,1068289..1068345,1069023..1069173))
location: region:1039979-1069173:-1
so has part: feature:1069023-1069173:-1:exon
so has part: feature:1068289-1068345:-1:exon
so has part: feature:1067906-1068050:-1:exon
so has part: feature:1067522-1067596:-1:exon
so has part: feature:1066636-1066714:-1:exon
so has part: feature:1065881-1065943:-1:exon
so has part: feature:1065329-1065399:-1:exon
so has part: feature:1061699-1061718:-1:exon
so has part: feature:1061244-1061335:-1:exon
so has part: feature:1058928-1059102:-1:exon
so has part: feature:1049991-1050127:-1:exon
so has part: feature:1045137-1045232:-1:exon
so has part: feature:1044830-1044922:-1:exon
so has part: feature:1043482-1043553:-1:exon
so has part: feature:1042295-1042392:-1:exon
so has part: feature:1039979-1040102:-1:exon

XP_003210915.2
type: Protein
SIO_000068: ncbiprotein

position:1039979:-1
position: 1039979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069173:-1
position: 1069173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069023-1069173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068289-1068345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067906-1068050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067522-1067596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1066636-1066714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065881-1065943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065329-1065399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061699-1061718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061244-1061335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058928-1059102:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1049991-1050127:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1045137-1045232:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1044830-1044922:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1043482-1043553:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1042295-1042392:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1039979-1040102:-1:exon

TXNRD2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: TXNRD2
product: thioredoxin reductase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XR_004161553.1
SIO_010081: TXNRD2
so part of: TXNRD2
location: complement(join(1045137..1045232,1049991..1050127,1058932..1059102,1061244..1061335,1061699..1061718,1065329..1065399,1065881..1065943,1066636..1066714,1067522..1067596,1067906..1068050,1068289..1068345,1069023..1069282))
location: region:1045137-1069282:-1
so has part: feature:1069023-1069282:-1:exon
so has part: feature:1068289-1068345:-1:exon
so has part: feature:1067906-1068050:-1:exon
so has part: feature:1067522-1067596:-1:exon
so has part: feature:1066636-1066714:-1:exon
so has part: feature:1065881-1065943:-1:exon
so has part: feature:1065329-1065399:-1:exon
so has part: feature:1061699-1061718:-1:exon
so has part: feature:1061244-1061335:-1:exon
so has part: feature:1058932-1059102:-1:exon
so has part: feature:1049991-1050127:-1:exon
so has part: feature:1045137-1045232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1069023-1069282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068289-1068345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067906-1068050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067522-1067596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1066636-1066714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065881-1065943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065329-1065399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061699-1061718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061244-1061335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058932-1059102:-1:exon

position:1058932:-1
position: 1058932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1049991-1050127:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1045137-1045232:-1:exon

TXNRD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TXNRD2
product: thioredoxin reductase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_031555927.1
SIO_010081: TXNRD2
subclass of: SO_0000673
so part of: TXNRD2
location: complement(join(1045239..1049704,1049991..1050127,1058928..1059102,1061244..1061335,1061699..1061718,1065329..1065399,1065881..1065943,1066636..1066714,1067522..1067596,1067906..1068050,1068289..1068345,1069023..1069282))
location: region:1045239-1069282:-1
so has part: feature:1069023-1069282:-1:exon
so has part: feature:1068289-1068345:-1:exon
so has part: feature:1067906-1068050:-1:exon
so has part: feature:1067522-1067596:-1:exon
so has part: feature:1066636-1066714:-1:exon
so has part: feature:1065881-1065943:-1:exon
so has part: feature:1065329-1065399:-1:exon
so has part: feature:1061699-1061718:-1:exon
so has part: feature:1061244-1061335:-1:exon
so has part: feature:1058928-1059102:-1:exon
so has part: feature:1049991-1050127:-1:exon
so has part: feature:1045239-1049704:-1:exon

position:1045239:-1
position: 1045239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069023-1069282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068289-1068345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067906-1068050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067522-1067596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1066636-1066714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065881-1065943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065329-1065399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061699-1061718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061244-1061335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058928-1059102:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1049991-1050127:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1045239-1049704:-1:exon

position:1049704:-1
position: 1049704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TXNRD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TXNRD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin reductase 2, mitochondrial isoform X2
translation: MYLFIFAFNTSLLSFLSVSFFFSPPNFSTGKEYDLLVIGGGSGGLACAKEAAQFGKKVAVLDYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGALKDAQHYGWSMAHPVHHSWSVMAQAVQNYVKSLNWGHRVQLQDKKVKYFNMKGSFLDSHTVCGLAKGGKKTTLTAEKIVIATGGRPKYPTHITGALEYGITSDDLFWLKDSPGKTLVVGASYVSLECAGFLTGVGLDTAVMMRSIPLRGFDQQMASLVTEHMESYGTKFLKKCVPMKVEKLESGRLQVTWKNTDLGTEEMDSFDTVMWAVGRVPDSETLNLEIVGVKTNSETGKIIVDASEATSVPHIYAIGDITECLYHFRCTTSCSL
SIO_010081: TXNRD2
subclass of: SO_0000673
so part of: TXNRD2
location: complement(join(1049663..1049704,1049991..1050127,1058928..1059102,1061244..1061335,1061699..1061718,1065329..1065399,1065881..1065943,1066636..1066714,1067522..1067596,1067906..1068050,1068289..1068345,1069023..1069173))
location: region:1049663-1069173:-1
so has part: feature:1069023-1069173:-1:exon
so has part: feature:1068289-1068345:-1:exon
so has part: feature:1067906-1068050:-1:exon
so has part: feature:1067522-1067596:-1:exon
so has part: feature:1066636-1066714:-1:exon
so has part: feature:1065881-1065943:-1:exon
so has part: feature:1065329-1065399:-1:exon
so has part: feature:1061699-1061718:-1:exon
so has part: feature:1061244-1061335:-1:exon
so has part: feature:1058928-1059102:-1:exon
so has part: feature:1049991-1050127:-1:exon
so has part: feature:1049663-1049704:-1:exon

XP_031411787.1
type: Protein
SIO_000068: ncbiprotein

position:1049663:-1
position: 1049663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1069023-1069173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1068289-1068345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1067906-1068050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1067522-1067596:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1066636-1066714:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1065881-1065943:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1065329-1065399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1061699-1061718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1061244-1061335:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1058928-1059102:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1049991-1050127:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1049663-1049704:-1:exon

COMT
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: COMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1070646..1089593
location: region:1070646-1089593:1
so has part: feature:1070646-1089593:1:exon
subclass of: SO_0000010

100545849
type: Gene
SIO_000068: ncbigene

position:1070646:1
position: 1070646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089593:1
position: 1089593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070646-1089593:1:exon

COMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: COMT
product: catechol-O-methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XM_010719985.3
SIO_010081: COMT
subclass of: SO_0000673
so part of: COMT
location: join(1070646..1070729,1081445..1081727,1084193..1084386,1086010..1086141,1088346..1089593)
location: region:1070646-1089593:1
so has part: feature:1070646-1070729:1:exon
so has part: feature:1081445-1081727:1:exon
so has part: feature:1084193-1084386:1:exon
so has part: feature:1086010-1086141:1:exon
so has part: feature:1088346-1089593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1070646-1070729:1:exon

position:1070729:1
position: 1070729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1081445-1081727:1:exon

position:1081445:1
position: 1081445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081727:1
position: 1081727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1084193-1084386:1:exon

position:1084193:1
position: 1084193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084386:1
position: 1084386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1086010-1086141:1:exon

position:1086010:1
position: 1086010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086141:1
position: 1086141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1088346-1089593:1:exon

position:1088346:1
position: 1088346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

COMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: COMT
product: catechol-O-methyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010719987.3
SIO_010081: COMT
subclass of: SO_0000673
so part of: COMT
location: join(1070653..1070781,1081445..1081727,1084193..1084386,1086010..1086141,1088346..1089593)
location: region:1070653-1089593:1
so has part: feature:1070653-1070781:1:exon
so has part: feature:1081445-1081727:1:exon
so has part: feature:1084193-1084386:1:exon
so has part: feature:1086010-1086141:1:exon
so has part: feature:1088346-1089593:1:exon

position:1070653:1
position: 1070653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070653-1070781:1:exon

position:1070781:1
position: 1070781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1081445-1081727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084193-1084386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086010-1086141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1088346-1089593:1:exon

COMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: COMT
product: catechol-O-methyltransferase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 152 samples with support for all annotated introns
transcript id: XM_003210866.4
SIO_010081: COMT
subclass of: SO_0000673
so part of: COMT
location: join(1074630..1075081,1081445..1081727,1084193..1084386,1086010..1086141,1088346..1089593)
location: region:1074630-1089593:1
so has part: feature:1074630-1075081:1:exon
so has part: feature:1081445-1081727:1:exon
so has part: feature:1084193-1084386:1:exon
so has part: feature:1086010-1086141:1:exon
so has part: feature:1088346-1089593:1:exon

position:1074630:1
position: 1074630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074630-1075081:1:exon

position:1075081:1
position: 1075081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1081445-1081727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084193-1084386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086010-1086141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1088346-1089593:1:exon

COMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: COMT
product: catechol-O-methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_010719986.3
SIO_010081: COMT
subclass of: SO_0000673
so part of: COMT
location: join(1081322..1081344,1081445..1081727,1084193..1084386,1086010..1086141,1088346..1089593)
location: region:1081322-1089593:1
so has part: feature:1081322-1081344:1:exon
so has part: feature:1081445-1081727:1:exon
so has part: feature:1084193-1084386:1:exon
so has part: feature:1086010-1086141:1:exon
so has part: feature:1088346-1089593:1:exon

position:1081322:1
position: 1081322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081322-1081344:1:exon

position:1081344:1
position: 1081344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1081445-1081727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084193-1084386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086010-1086141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1088346-1089593:1:exon

COMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: COMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catechol O-methyltransferase isoform X2
translation: MMLESSSVLLFIVFLLLFISLLCVVLIRKNGTAALIWHEIIKEKITNFIMNQSKEQRILNFVLQNAVRGDPCSVMETIDKYCSEKEWAMNVGDVKGVILDKTVEEINPKVALELGTYCGYSAVRIARLLKAGSRLLTVEFNPEFAAIAKQMIEFAGVQDKVKLLEGPSEVIIPQLKKKYEVDTLDFVFLDHWKDRYAPDTILLQECSLLRKGSVLLADNIIFPGAPEFVKYIRNNPRFQCRTYPSHLEYMKVQDAMEKAVFLG
SIO_010081: COMT
subclass of: SO_0000673
so part of: COMT
location: join(1081342..1081344,1081445..1081727,1084193..1084386,1086010..1086141,1088346..1088525)
location: region:1081342-1088525:1
so has part: feature:1081342-1081344:1:exon
so has part: feature:1081445-1081727:1:exon
so has part: feature:1084193-1084386:1:exon
so has part: feature:1086010-1086141:1:exon
so has part: feature:1088346-1088525:1:exon

XP_010718288.1
type: Protein
SIO_000068: ncbiprotein

position:1081342:1
position: 1081342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088525:1
position: 1088525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081342-1081344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081445-1081727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084193-1084386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1086010-1086141:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1088346-1088525:1:exon

COMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: COMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catechol O-methyltransferase isoform X1
translation: MLESSSVLLFIVFLLLFISLLCVVLIRKNGTAALIWHEIIKEKITNFIMNQSKEQRILNFVLQNAVRGDPCSVMETIDKYCSEKEWAMNVGDVKGVILDKTVEEINPKVALELGTYCGYSAVRIARLLKAGSRLLTVEFNPEFAAIAKQMIEFAGVQDKVKLLEGPSEVIIPQLKKKYEVDTLDFVFLDHWKDRYAPDTILLQECSLLRKGSVLLADNIIFPGAPEFVKYIRNNPRFQCRTYPSHLEYMKVQDAMEKAVFLG
SIO_010081: COMT
subclass of: SO_0000673
so part of: COMT
location: join(1081445..1081727,1084193..1084386,1086010..1086141,1088346..1088525)
location: region:1081445-1088525:1
so has part: feature:1081445-1081727:1:exon
so has part: feature:1084193-1084386:1:exon
so has part: feature:1086010-1086141:1:exon
so has part: feature:1088346-1088525:1:exon

XP_003210914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1081445-1081727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084193-1084386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1086010-1086141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1088346-1088525:1:exon

COMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: COMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catechol O-methyltransferase isoform X1
translation: MLESSSVLLFIVFLLLFISLLCVVLIRKNGTAALIWHEIIKEKITNFIMNQSKEQRILNFVLQNAVRGDPCSVMETIDKYCSEKEWAMNVGDVKGVILDKTVEEINPKVALELGTYCGYSAVRIARLLKAGSRLLTVEFNPEFAAIAKQMIEFAGVQDKVKLLEGPSEVIIPQLKKKYEVDTLDFVFLDHWKDRYAPDTILLQECSLLRKGSVLLADNIIFPGAPEFVKYIRNNPRFQCRTYPSHLEYMKVQDAMEKAVFLG
SIO_010081: COMT
subclass of: SO_0000673
so part of: COMT
location: join(1081445..1081727,1084193..1084386,1086010..1086141,1088346..1088525)
location: region:1081445-1088525:1
so has part: feature:1081445-1081727:1:exon
so has part: feature:1084193-1084386:1:exon
so has part: feature:1086010-1086141:1:exon
so has part: feature:1088346-1088525:1:exon

XP_010718287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1081445-1081727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084193-1084386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1086010-1086141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1088346-1088525:1:exon

COMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: COMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catechol O-methyltransferase isoform X1
translation: MLESSSVLLFIVFLLLFISLLCVVLIRKNGTAALIWHEIIKEKITNFIMNQSKEQRILNFVLQNAVRGDPCSVMETIDKYCSEKEWAMNVGDVKGVILDKTVEEINPKVALELGTYCGYSAVRIARLLKAGSRLLTVEFNPEFAAIAKQMIEFAGVQDKVKLLEGPSEVIIPQLKKKYEVDTLDFVFLDHWKDRYAPDTILLQECSLLRKGSVLLADNIIFPGAPEFVKYIRNNPRFQCRTYPSHLEYMKVQDAMEKAVFLG
SIO_010081: COMT
subclass of: SO_0000673
so part of: COMT
location: join(1081445..1081727,1084193..1084386,1086010..1086141,1088346..1088525)
location: region:1081445-1088525:1
so has part: feature:1081445-1081727:1:exon
so has part: feature:1084193-1084386:1:exon
so has part: feature:1086010-1086141:1:exon
so has part: feature:1088346-1088525:1:exon

XP_010718289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1081445-1081727:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1084193-1084386:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1086010-1086141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1088346-1088525:1:exon

ARVCF
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ARVCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1093234..1312653)
location: region:1093234-1312653:-1
so has part: feature:1093234-1312653:-1:exon
subclass of: SO_0000010

100547080
type: Gene
SIO_000068: ncbigene

position:1093234:-1
position: 1093234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312653:-1
position: 1312653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093234-1312653:-1:exon

ARVCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARVCF
product: ARVCF delta catenin family member, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_010719984.3
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1093234..1098562,1099941..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1247892..1247957,1312574..1312653))
location: region:1093234-1312653:-1
so has part: feature:1312574-1312653:-1:exon
so has part: feature:1247892-1247957:-1:exon
so has part: feature:1175441-1175599:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099941-1100054:-1:exon
so has part: feature:1093234-1098562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312574-1312653:-1:exon

position:1312574:-1
position: 1312574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1247892-1247957:-1:exon

position:1247892:-1
position: 1247892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1247957:-1
position: 1247957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175441-1175599:-1:exon

position:1175441:-1
position: 1175441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175599:-1
position: 1175599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1166926-1167533:-1:exon

position:1166926:-1
position: 1166926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167533:-1
position: 1167533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1159284-1159783:-1:exon

position:1159284:-1
position: 1159284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159783:-1
position: 1159783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1151572-1151755:-1:exon

position:1151572:-1
position: 1151572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151755:-1
position: 1151755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1141034-1141151:-1:exon

position:1141034:-1
position: 1141034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1141151:-1
position: 1141151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1139554-1139725:-1:exon

position:1139554:-1
position: 1139554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139725:-1
position: 1139725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1133636-1133707:-1:exon

position:1133636:-1
position: 1133636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133707:-1
position: 1133707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1112518-1112645:-1:exon

position:1112518:-1
position: 1112518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112645:-1
position: 1112645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1111456-1111606:-1:exon

position:1111456:-1
position: 1111456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1111606:-1
position: 1111606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1109942-1110134:-1:exon

position:1109942:-1
position: 1109942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1110134:-1
position: 1110134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1109147-1109258:-1:exon

position:1109147:-1
position: 1109147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109258:-1
position: 1109258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1108446-1108536:-1:exon

position:1108446:-1
position: 1108446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108536:-1
position: 1108536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1107886-1107939:-1:exon

position:1107886:-1
position: 1107886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107939:-1
position: 1107939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1102544-1102635:-1:exon

position:1102544:-1
position: 1102544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1102635:-1
position: 1102635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1099941-1100054:-1:exon

position:1099941:-1
position: 1099941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1100054:-1
position: 1100054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1093234-1098562:-1:exon

position:1098562:-1
position: 1098562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARVCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARVCF
product: ARVCF delta catenin family member, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031555926.1
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1093234..1098562,1099941..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1183065..1183103,1247892..1247957,1312574..1312653))
location: region:1093234-1312653:-1
so has part: feature:1312574-1312653:-1:exon
so has part: feature:1247892-1247957:-1:exon
so has part: feature:1183065-1183103:-1:exon
so has part: feature:1175441-1175599:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099941-1100054:-1:exon
so has part: feature:1093234-1098562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312574-1312653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1247892-1247957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1183065-1183103:-1:exon

position:1183065:-1
position: 1183065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183103:-1
position: 1183103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175441-1175599:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1099941-1100054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1093234-1098562:-1:exon

ARVCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARVCF
product: ARVCF delta catenin family member, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010719983.3
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1093234..1098562,1099941..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1238755..1238856,1247892..1247957,1312574..1312653))
location: region:1093234-1312653:-1
so has part: feature:1312574-1312653:-1:exon
so has part: feature:1247892-1247957:-1:exon
so has part: feature:1238755-1238856:-1:exon
so has part: feature:1175441-1175599:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099941-1100054:-1:exon
so has part: feature:1093234-1098562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312574-1312653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1247892-1247957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1238755-1238856:-1:exon

position:1238755:-1
position: 1238755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238856:-1
position: 1238856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175441-1175599:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1099941-1100054:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1093234-1098562:-1:exon

ARVCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARVCF
product: ARVCF delta catenin family member, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031555925.1
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1093234..1098562,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1233959..1234203,1238755..1238856,1247892..1247957,1312574..1312653))
location: region:1093234-1312653:-1
so has part: feature:1312574-1312653:-1:exon
so has part: feature:1247892-1247957:-1:exon
so has part: feature:1238755-1238856:-1:exon
so has part: feature:1233959-1234203:-1:exon
so has part: feature:1175441-1175599:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1093234-1098562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1312574-1312653:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1247892-1247957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1238755-1238856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1233959-1234203:-1:exon

position:1233959:-1
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reference: sequence
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position:1234203:-1
position: 1234203
reference: sequence
type: ReverseStrandPosition
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urn:…
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ARVCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARVCF
product: ARVCF delta catenin family member, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031555923.1
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1093234..1098562,1099941..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1233959..1234203,1238755..1238856,1247892..1247957,1312574..1312653))
location: region:1093234-1312653:-1
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urn:…
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SIO_000628: feature:1093234-1098562:-1:exon

ARVCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARVCF
product: ARVCF delta catenin family member, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031555924.1
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1093234..1098562,1099941..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1233959..1234203,1238755..1238856,1247892..1247957,1312163..1312251))
location: region:1093234-1312251:-1
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urn:…
SIO_000300: 20
SIO_000628: feature:1093234-1098562:-1:exon

ARVCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARVCF
product: ARVCF delta catenin family member, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_019620965.2
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1093234..1098562,1099941..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1223116..1223891))
location: region:1093234-1223891:-1
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SIO_000628: feature:1093234-1098562:-1:exon

ARVCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARVCF
product: ARVCF delta catenin family member, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_010719982.3
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1093234..1098562,1099941..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1222495..1222521))
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SIO_000628: feature:1093234-1098562:-1:exon

ARVCF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARVCF
product: ARVCF delta catenin family member, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_019620966.2
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1093234..1098562,1099941..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1222037..1222059))
location: region:1093234-1222059:-1
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ARVCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARVCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X2
translation: MDDYDIRSAASILASVKEQEARFERLTRALEEERRNVSLQLERANQPADRMSICNIGNGQPLATAWQQLVLQEQSPSNQTSIAMMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGTTRRTETKVTKMVKTVTTRTVRQVPLGPDGLPSMDGSSPMGSYTDSIDRRYMKNGERYITPQASSTLTRSYNSYNDSYPDSHEGQYRPYVGHDGYGDLADNYGSLSRGVNYRPRYAYVPGNSYRPDDGSFTLPSRRDNYGPVAQPQVPVGSSVDLNRSQPERFQPEPYGLEDDNRSLGVDDEGYELDPDYSTVNRRTSAGVPERGRPHKGRGYDDPIEAEMVEERIPYLHGSYAAPLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQHLCYENDKIKKDVRHLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWESEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDTDNKSVENCVCIMRNLSYHVHKEVPGADKYQELDAGQTAGTGGSQKKKKDDAGCFGGKKAKGKKNGDLDRNFDTLDLPKRSETAKGFELLYQPDVVRLYLSILTESQNFNTLEAAAGALQNLSAGNWTWSTYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSMDRRNKDLIGSYAMSELVRNLPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQTQGIQKLVAISKSSQSPRETKAASHVLQMIWSYKELRNALQKDGWNKSHFQSVSATPKSSKGTAGRSGYDDSTLPLVDKSQDNEKTGSRDMIPMDELGPDGYSTIDHRDKERKYKTSDNTGDASEKEPLKA
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1098557..1098562,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1233959..1234174))
location: region:1098557-1234174:-1
so has part: feature:1233959-1234174:-1:exon
so has part: feature:1175441-1175599:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1098557-1098562:-1:exon

XP_031411785.1
type: Protein
SIO_000068: ncbiprotein

position:1098557:-1
position: 1098557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234174:-1
position: 1234174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233959-1234174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1175441-1175599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1098557-1098562:-1:exon

ARVCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARVCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1
translation: MDDYDIRSAASILASVKEQEARFERLTRALEEERRNVSLQLERANQPADRMSICNIGNGQPLATAWQQLVLQEQSPSNQTSIAMMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGTTRRTETKVTKMVKTVTTRTVRQVPLGPDGLPSMDGSSPMGSYTDSIDRRYMKNGERYITPQASSTLTRSYNSYNDSYPDSHEGQYRPYVGHDGYGDLADNYGSLSRGVNYRPRYAYVPGNSYRPDDGSFTLPSRRDNYGPVAQPQVPVGSSVDLNRSQPERFQPEPYGLEDDNRSLGVDDEGYELDPDYSTVNRRTSAGVPERGRPHKGRGYDDPIEAEMVEERIPYLHGSYAAPLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQHLCYENDKIKKDVRHLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWESEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDTDNKSVENCVCIMRNLSYHVHKEVPGADKYQELDAGQTAGTGGSQKKKKDDAGCFGGKKAKGKKNGDLDRNFDTLDLPKRSETAKGFELLYQPDVVRLYLSILTESQNFNTLEAAAGALQNLSAGNWTWSTYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSMDRRNKDLIGSYAMSELVRNLPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQTQGIQKLVAISKSSQSPRETKAASHVLQMIWSYKELRNALQKDGWNKSHFQSVSATPKSSKGTAGRSGYDDSTLPLVDKSQDNEKTGSRDMIPMDELGPDGYSTIDHRDKERKYKTSDNTGDASEKEPLKNDTNRKNINRSNRASVNLVDARDIKPQPVDSWV
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1099953..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1233959..1234174))
location: region:1099953-1234174:-1
so has part: feature:1233959-1234174:-1:exon
so has part: feature:1175441-1175599:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099953-1100054:-1:exon

XP_031411783.1
type: Protein
SIO_000068: ncbiprotein

position:1099953:-1
position: 1099953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1233959-1234174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1175441-1175599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1099953-1100054:-1:exon

ARVCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARVCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X1
translation: MDDYDIRSAASILASVKEQEARFERLTRALEEERRNVSLQLERANQPADRMSICNIGNGQPLATAWQQLVLQEQSPSNQTSIAMMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGTTRRTETKVTKMVKTVTTRTVRQVPLGPDGLPSMDGSSPMGSYTDSIDRRYMKNGERYITPQASSTLTRSYNSYNDSYPDSHEGQYRPYVGHDGYGDLADNYGSLSRGVNYRPRYAYVPGNSYRPDDGSFTLPSRRDNYGPVAQPQVPVGSSVDLNRSQPERFQPEPYGLEDDNRSLGVDDEGYELDPDYSTVNRRTSAGVPERGRPHKGRGYDDPIEAEMVEERIPYLHGSYAAPLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQHLCYENDKIKKDVRHLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWESEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDTDNKSVENCVCIMRNLSYHVHKEVPGADKYQELDAGQTAGTGGSQKKKKDDAGCFGGKKAKGKKNGDLDRNFDTLDLPKRSETAKGFELLYQPDVVRLYLSILTESQNFNTLEAAAGALQNLSAGNWTWSTYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSMDRRNKDLIGSYAMSELVRNLPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQTQGIQKLVAISKSSQSPRETKAASHVLQMIWSYKELRNALQKDGWNKSHFQSVSATPKSSKGTAGRSGYDDSTLPLVDKSQDNEKTGSRDMIPMDELGPDGYSTIDHRDKERKYKTSDNTGDASEKEPLKNDTNRKNINRSNRASVNLVDARDIKPQPVDSWV
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1099953..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1233959..1234174))
location: region:1099953-1234174:-1
so has part: feature:1233959-1234174:-1:exon
so has part: feature:1175441-1175599:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099953-1100054:-1:exon

XP_031411784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1233959-1234174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1175441-1175599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1099953-1100054:-1:exon

ARVCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARVCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X4
translation: MPAELEREQSPSNQTSIAMMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGTTRRTETKVTKMVKTVTTRTVRQVPLGPDGLPSMDGSSPMGSYTDSIDRRYMKNGERYITPQASSTLTRSYNSYNDSYPDSHEGQYRPYVGHDGYGDLADNYGSLSRGVNYRPRYAYVPGNSYRPDDGSFTLPSRRDNYGPVAQPQVPVGSSVDLNRSQPERFQPEPYGLEDDNRSLGVDDEGYELDPDYSTVNRRTSAGVPERGRPHKGRGYDDPIEAEMVEERIPYLHGSYAAPLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQHLCYENDKIKKDVRHLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWESEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDTDNKSVENCVCIMRNLSYHVHKEVPGADKYQELDAGQTAGTGGSQKKKKDDAGCFGGKKAKGKKNGDLDRNFDTLDLPKRSETAKGFELLYQPDVVRLYLSILTESQNFNTLEAAAGALQNLSAGNWTWSTYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSMDRRNKDLIGSYAMSELVRNLPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQTQGIQKLVAISKSSQSPRETKAASHVLQMIWSYKELRNALQKDGWNKSHFQSVSATPKSSKGTAGRSGYDDSTLPLVDKSQDNEKTGSRDMIPMDELGPDGYSTIDHRDKERKYKTSDNTGDASEKEPLKNDTNRKNINRSNRASVNLVDARDIKPQPVDSWV
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1099953..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1222495..1222515))
location: region:1099953-1222515:-1
so has part: feature:1222495-1222515:-1:exon
so has part: feature:1175441-1175599:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099953-1100054:-1:exon

XP_010718284.1
type: Protein
SIO_000068: ncbiprotein

position:1222515:-1
position: 1222515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222495-1222515:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1175441-1175599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1099953-1100054:-1:exon

ARVCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARVCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X3
translation: MKDLACTSDSYVHEQSPSNQTSIAMMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGTTRRTETKVTKMVKTVTTRTVRQVPLGPDGLPSMDGSSPMGSYTDSIDRRYMKNGERYITPQASSTLTRSYNSYNDSYPDSHEGQYRPYVGHDGYGDLADNYGSLSRGVNYRPRYAYVPGNSYRPDDGSFTLPSRRDNYGPVAQPQVPVGSSVDLNRSQPERFQPEPYGLEDDNRSLGVDDEGYELDPDYSTVNRRTSAGVPERGRPHKGRGYDDPIEAEMVEERIPYLHGSYAAPLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQHLCYENDKIKKDVRHLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWESEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDTDNKSVENCVCIMRNLSYHVHKEVPGADKYQELDAGQTAGTGGSQKKKKDDAGCFGGKKAKGKKNGDLDRNFDTLDLPKRSETAKGFELLYQPDVVRLYLSILTESQNFNTLEAAAGALQNLSAGNWTWSTYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSMDRRNKDLIGSYAMSELVRNLPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQTQGIQKLVAISKSSQSPRETKAASHVLQMIWSYKELRNALQKDGWNKSHFQSVSATPKSSKGTAGRSGYDDSTLPLVDKSQDNEKTGSRDMIPMDELGPDGYSTIDHRDKERKYKTSDNTGDASEKEPLKNDTNRKNINRSNRASVNLVDARDIKPQPVDSWV
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1099953..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175599,1183065..1183103))
location: region:1099953-1183103:-1
so has part: feature:1183065-1183103:-1:exon
so has part: feature:1175441-1175599:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099953-1100054:-1:exon

XP_031411786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1183065-1183103:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1175441-1175599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1099953-1100054:-1:exon

ARVCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARVCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X5
translation: MMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGTTRRTETKVTKMVKTVTTRTVRQVPLGPDGLPSMDGSSPMGSYTDSIDRRYMKNGERYITPQASSTLTRSYNSYNDSYPDSHEGQYRPYVGHDGYGDLADNYGSLSRGVNYRPRYAYVPGNSYRPDDGSFTLPSRRDNYGPVAQPQVPVGSSVDLNRSQPERFQPEPYGLEDDNRSLGVDDEGYELDPDYSTVNRRTSAGVPERGRPHKGRGYDDPIEAEMVEERIPYLHGSYAAPLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQHLCYENDKIKKDVRHLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWESEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDTDNKSVENCVCIMRNLSYHVHKEVPGADKYQELDAGQTAGTGGSQKKKKDDAGCFGGKKAKGKKNGDLDRNFDTLDLPKRSETAKGFELLYQPDVVRLYLSILTESQNFNTLEAAAGALQNLSAGNWTWSTYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSMDRRNKDLIGSYAMSELVRNLPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQTQGIQKLVAISKSSQSPRETKAASHVLQMIWSYKELRNALQKDGWNKSHFQSVSATPKSSKGTAGRSGYDDSTLPLVDKSQDNEKTGSRDMIPMDELGPDGYSTIDHRDKERKYKTSDNTGDASEKEPLKNDTNRKNINRSNRASVNLVDARDIKPQPVDSWV
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1099953..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175566))
location: region:1099953-1175566:-1
so has part: feature:1175441-1175566:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099953-1100054:-1:exon

XP_019476510.1
type: Protein
SIO_000068: ncbiprotein

position:1175566:-1
position: 1175566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1175441-1175566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1099953-1100054:-1:exon

ARVCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARVCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X5
translation: MMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGTTRRTETKVTKMVKTVTTRTVRQVPLGPDGLPSMDGSSPMGSYTDSIDRRYMKNGERYITPQASSTLTRSYNSYNDSYPDSHEGQYRPYVGHDGYGDLADNYGSLSRGVNYRPRYAYVPGNSYRPDDGSFTLPSRRDNYGPVAQPQVPVGSSVDLNRSQPERFQPEPYGLEDDNRSLGVDDEGYELDPDYSTVNRRTSAGVPERGRPHKGRGYDDPIEAEMVEERIPYLHGSYAAPLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQHLCYENDKIKKDVRHLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWESEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDTDNKSVENCVCIMRNLSYHVHKEVPGADKYQELDAGQTAGTGGSQKKKKDDAGCFGGKKAKGKKNGDLDRNFDTLDLPKRSETAKGFELLYQPDVVRLYLSILTESQNFNTLEAAAGALQNLSAGNWTWSTYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSMDRRNKDLIGSYAMSELVRNLPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQTQGIQKLVAISKSSQSPRETKAASHVLQMIWSYKELRNALQKDGWNKSHFQSVSATPKSSKGTAGRSGYDDSTLPLVDKSQDNEKTGSRDMIPMDELGPDGYSTIDHRDKERKYKTSDNTGDASEKEPLKNDTNRKNINRSNRASVNLVDARDIKPQPVDSWV
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1099953..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175566))
location: region:1099953-1175566:-1
so has part: feature:1175441-1175566:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099953-1100054:-1:exon

XP_019476511.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1175441-1175566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1099953-1100054:-1:exon

ARVCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARVCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X5
translation: MMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGTTRRTETKVTKMVKTVTTRTVRQVPLGPDGLPSMDGSSPMGSYTDSIDRRYMKNGERYITPQASSTLTRSYNSYNDSYPDSHEGQYRPYVGHDGYGDLADNYGSLSRGVNYRPRYAYVPGNSYRPDDGSFTLPSRRDNYGPVAQPQVPVGSSVDLNRSQPERFQPEPYGLEDDNRSLGVDDEGYELDPDYSTVNRRTSAGVPERGRPHKGRGYDDPIEAEMVEERIPYLHGSYAAPLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQHLCYENDKIKKDVRHLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWESEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDTDNKSVENCVCIMRNLSYHVHKEVPGADKYQELDAGQTAGTGGSQKKKKDDAGCFGGKKAKGKKNGDLDRNFDTLDLPKRSETAKGFELLYQPDVVRLYLSILTESQNFNTLEAAAGALQNLSAGNWTWSTYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSMDRRNKDLIGSYAMSELVRNLPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQTQGIQKLVAISKSSQSPRETKAASHVLQMIWSYKELRNALQKDGWNKSHFQSVSATPKSSKGTAGRSGYDDSTLPLVDKSQDNEKTGSRDMIPMDELGPDGYSTIDHRDKERKYKTSDNTGDASEKEPLKNDTNRKNINRSNRASVNLVDARDIKPQPVDSWV
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1099953..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175566))
location: region:1099953-1175566:-1
so has part: feature:1175441-1175566:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099953-1100054:-1:exon

XP_010718285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1175441-1175566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1099953-1100054:-1:exon

ARVCF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARVCF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: armadillo repeat protein deleted in velo-cardio-facial syndrome isoform X5
translation: MMQEPQEMVEETVTVEEDPGTPTSHVSIVTSEDGTTRRTETKVTKMVKTVTTRTVRQVPLGPDGLPSMDGSSPMGSYTDSIDRRYMKNGERYITPQASSTLTRSYNSYNDSYPDSHEGQYRPYVGHDGYGDLADNYGSLSRGVNYRPRYAYVPGNSYRPDDGSFTLPSRRDNYGPVAQPQVPVGSSVDLNRSQPERFQPEPYGLEDDNRSLGVDDEGYELDPDYSTVNRRTSAGVPERGRPHKGRGYDDPIEAEMVEERIPYLHGSYAAPLAQPERGSMASIDRLGKRSPSIDSIRKDPRWRDPDLPEVIAMLSHPIDPVKSNAAAYLQHLCYENDKIKKDVRHLKGIPILVGLLDHPKPEVHRKACGALRNISYGKDNENKVAIKNCDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTLTNEVIIPHSGWESEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECDGLVDALLHALQSAVGKKDTDNKSVENCVCIMRNLSYHVHKEVPGADKYQELDAGQTAGTGGSQKKKKDDAGCFGGKKAKGKKNGDLDRNFDTLDLPKRSETAKGFELLYQPDVVRLYLSILTESQNFNTLEAAAGALQNLSAGNWTWSTYIRATVRKERGLPVLVELLQSDSDKVVRAVSIALRNLSMDRRNKDLIGSYAMSELVRNLPSRQQRSAKNLEEDTVVAVLNTIHEIITDSSENARSLIQTQGIQKLVAISKSSQSPRETKAASHVLQMIWSYKELRNALQKDGWNKSHFQSVSATPKSSKGTAGRSGYDDSTLPLVDKSQDNEKTGSRDMIPMDELGPDGYSTIDHRDKERKYKTSDNTGDASEKEPLKNDTNRKNINRSNRASVNLVDARDIKPQPVDSWV
SIO_010081: ARVCF
subclass of: SO_0000673
so part of: ARVCF
location: complement(join(1099953..1100054,1102544..1102635,1107886..1107939,1108446..1108536,1109147..1109258,1109942..1110134,1111456..1111606,1112518..1112645,1133636..1133707,1139554..1139725,1141034..1141151,1151572..1151755,1159284..1159783,1166926..1167533,1175441..1175566))
location: region:1099953-1175566:-1
so has part: feature:1175441-1175566:-1:exon
so has part: feature:1166926-1167533:-1:exon
so has part: feature:1159284-1159783:-1:exon
so has part: feature:1151572-1151755:-1:exon
so has part: feature:1141034-1141151:-1:exon
so has part: feature:1139554-1139725:-1:exon
so has part: feature:1133636-1133707:-1:exon
so has part: feature:1112518-1112645:-1:exon
so has part: feature:1111456-1111606:-1:exon
so has part: feature:1109942-1110134:-1:exon
so has part: feature:1109147-1109258:-1:exon
so has part: feature:1108446-1108536:-1:exon
so has part: feature:1107886-1107939:-1:exon
so has part: feature:1102544-1102635:-1:exon
so has part: feature:1099953-1100054:-1:exon

XP_010718286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1175441-1175566:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1166926-1167533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159284-1159783:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1151572-1151755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141034-1141151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1139554-1139725:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1133636-1133707:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1112518-1112645:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1111456-1111606:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1109942-1110134:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1109147-1109258:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1108446-1108536:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1107886-1107939:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1102544-1102635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1099953-1100054:-1:exon

TANGO2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TANGO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1313343..1327293
location: region:1313343-1327293:1
so has part: feature:1313343-1327293:1:exon
subclass of: SO_0000010

100548308
type: Gene
SIO_000068: ncbigene

position:1313343:1
position: 1313343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327293:1
position: 1327293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1313343-1327293:1:exon

TANGO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TANGO2
product: transport and golgi organization 2 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003210880.4
SIO_010081: TANGO2
subclass of: SO_0000673
so part of: TANGO2
location: join(1313343..1313436,1315883..1316000,1318986..1319074,1320707..1320826,1321006..1321120,1323762..1323832,1324826..1324979,1325088..1325192,1325302..1327293)
location: region:1313343-1327293:1
so has part: feature:1313343-1313436:1:exon
so has part: feature:1315883-1316000:1:exon
so has part: feature:1318986-1319074:1:exon
so has part: feature:1320707-1320826:1:exon
so has part: feature:1321006-1321120:1:exon
so has part: feature:1323762-1323832:1:exon
so has part: feature:1324826-1324979:1:exon
so has part: feature:1325088-1325192:1:exon
so has part: feature:1325302-1327293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1313343-1313436:1:exon

position:1313436:1
position: 1313436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1315883-1316000:1:exon

position:1315883:1
position: 1315883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1316000:1
position: 1316000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1318986-1319074:1:exon

position:1318986:1
position: 1318986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1319074:1
position: 1319074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1320707-1320826:1:exon

position:1320707:1
position: 1320707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1320826:1
position: 1320826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1321006-1321120:1:exon

position:1321006:1
position: 1321006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321120:1
position: 1321120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1323762-1323832:1:exon

position:1323762:1
position: 1323762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1323832:1
position: 1323832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1324826-1324979:1:exon

position:1324826:1
position: 1324826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324979:1
position: 1324979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1325088-1325192:1:exon

position:1325088:1
position: 1325088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325192:1
position: 1325192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1325302-1327293:1:exon

position:1325302:1
position: 1325302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TANGO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TANGO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transport and Golgi organization protein 2 homolog
translation: MCIILFKFDPRPVSKNAYRLILAANRDEFYSRPSKSADFWDSSNEILSGLDMEEGKEGGTWLGISKKGRMAALTNYMQPTTDKNAKGRGALVTNFLTSDLDCYSYLKKVSVEGHLYNGFNLIAADLNSTKGDVICYYGNKGEPEPVFLNPGIYGLSNCLLDTPWKKLQYGKQLFTEVINRSQDLAKEDLVQELLTVMNNQEPQLPDPAIEDQGKEYIRPILNKYAAVCVRCPGYGTRTNTVLLIDSEGNVTFTERAMINEDVSQWKTSTYEFKLHV
SIO_010081: TANGO2
subclass of: SO_0000673
so part of: TANGO2
location: join(1315945..1316000,1318986..1319074,1320707..1320826,1321006..1321120,1323762..1323832,1324826..1324979,1325088..1325192,1325302..1325422)
location: region:1315945-1325422:1
so has part: feature:1315945-1316000:1:exon
so has part: feature:1318986-1319074:1:exon
so has part: feature:1320707-1320826:1:exon
so has part: feature:1321006-1321120:1:exon
so has part: feature:1323762-1323832:1:exon
so has part: feature:1324826-1324979:1:exon
so has part: feature:1325088-1325192:1:exon
so has part: feature:1325302-1325422:1:exon

XP_003210928.1
type: Protein
SIO_000068: ncbiprotein

position:1315945:1
position: 1315945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325422:1
position: 1325422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1315945-1316000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1318986-1319074:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1320707-1320826:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1321006-1321120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1323762-1323832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1324826-1324979:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1325088-1325192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1325302-1325422:1:exon

DGCR8
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DGCR8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1333059..1347426
location: region:1333059-1347426:1
so has part: feature:1333059-1347426:1:exon
subclass of: SO_0000010

100546160
type: Gene
SIO_000068: ncbigene

position:1333059:1
position: 1333059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1347426:1
position: 1347426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333059-1347426:1:exon

DGCR8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DGCR8
product: DGCR8 microprocessor complex subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_003210868.4
SIO_010081: DGCR8
subclass of: SO_0000673
so part of: DGCR8
location: join(1333059..1334095,1334537..1334699,1335953..1336095,1336790..1337072,1337500..1337697,1338852..1338953,1339992..1340090,1341353..1341435,1341697..1341797,1342251..1342357,1342565..1342692,1343106..1343219,1343594..1347426)
location: region:1333059-1347426:1
so has part: feature:1333059-1334095:1:exon
so has part: feature:1334537-1334699:1:exon
so has part: feature:1335953-1336095:1:exon
so has part: feature:1336790-1337072:1:exon
so has part: feature:1337500-1337697:1:exon
so has part: feature:1338852-1338953:1:exon
so has part: feature:1339992-1340090:1:exon
so has part: feature:1341353-1341435:1:exon
so has part: feature:1341697-1341797:1:exon
so has part: feature:1342251-1342357:1:exon
so has part: feature:1342565-1342692:1:exon
so has part: feature:1343106-1343219:1:exon
so has part: feature:1343594-1347426:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1333059-1334095:1:exon

position:1334095:1
position: 1334095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1334537-1334699:1:exon

position:1334537:1
position: 1334537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334699:1
position: 1334699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1335953-1336095:1:exon

position:1335953:1
position: 1335953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336095:1
position: 1336095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1336790-1337072:1:exon

position:1336790:1
position: 1336790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337072:1
position: 1337072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1337500-1337697:1:exon

position:1337500:1
position: 1337500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337697:1
position: 1337697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1338852-1338953:1:exon

position:1338852:1
position: 1338852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338953:1
position: 1338953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1339992-1340090:1:exon

position:1339992:1
position: 1339992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340090:1
position: 1340090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1341353-1341435:1:exon

position:1341353:1
position: 1341353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341435:1
position: 1341435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1341697-1341797:1:exon

position:1341697:1
position: 1341697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341797:1
position: 1341797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1342251-1342357:1:exon

position:1342251:1
position: 1342251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342357:1
position: 1342357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1342565-1342692:1:exon

position:1342565:1
position: 1342565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1342692:1
position: 1342692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1343106-1343219:1:exon

position:1343106:1
position: 1343106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343219:1
position: 1343219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1343594-1347426:1:exon

position:1343594:1
position: 1343594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DGCR8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DGCR8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microprocessor complex subunit DGCR8
translation: MEKYENAPPLPKEPAREMNVENHTCPPPLPPNEQPPPPPLQTSSDAEVMDVGSGGDGQSDTPAGDTHSICRTQLLTKGSACYKSRLIIDPNSSDQSPRTARHAPSVRKFTPDLKLLKDVKISVSFTESCKSKDRKVLYTGIEQDYKADTDFGINNVNGDLHVCPFGGSNGKAVGIGGENDDKKDDENDVDQEKRVEYAVLDELEDFTDNLMEIDEEGGGFTSKAIVQRDKVDEETMNYSYEDDFDNDVDALLEEGLRAPKTRRVENEKYGAESDHQSDGETSVQPMMTKIKTVLKSRGRPPTEPLPDGWIMTFHNSGIPVYLHRESRVVTWSRPYFLGTGSIRKHDPPLSSIPCLHYKKMKENEEREQNNDITPNGEVSPIKHLDKSSELDCQTEEPDSTAADSGPLDEKDTSGGDAAQGALGQVKAKVEVCKDESVDLEDFRRYLEKRFDFEQVTVKKFRTWAERRQFNREMKRKQAESERPILPANQKLITLSVQDAPIKKEFVINPNGKSEVCILHEYMQRVLKVRPVYNFFECENPSEPFGASVIIDGVTYGAGTASSKKLAKNKAARATLEILIPDFVKQTSEEKPKDSEELEYFNHISIEDSRVYELTSKAGLLSPYQILHECLKRNHGMGDTSIKFEVIPGKNQKSEYVMTCGKHTVRGWCKNKRVGKQLASQKILQLLHPHVKNWGSLLRMYGRESSKMVKQETSDKSVIELQQYAKKNKPNLHILNKLQEEMKKLAQEREETRKKPKMTIVESAQPGSEPLCTVDV
SIO_010081: DGCR8
subclass of: SO_0000673
so part of: DGCR8
location: join(1333373..1334095,1334537..1334699,1335953..1336095,1336790..1337072,1337500..1337697,1338852..1338953,1339992..1340090,1341353..1341435,1341697..1341797,1342251..1342357,1342565..1342692,1343106..1343219,1343594..1343677)
location: region:1333373-1343677:1
so has part: feature:1333373-1334095:1:exon
so has part: feature:1334537-1334699:1:exon
so has part: feature:1335953-1336095:1:exon
so has part: feature:1336790-1337072:1:exon
so has part: feature:1337500-1337697:1:exon
so has part: feature:1338852-1338953:1:exon
so has part: feature:1339992-1340090:1:exon
so has part: feature:1341353-1341435:1:exon
so has part: feature:1341697-1341797:1:exon
so has part: feature:1342251-1342357:1:exon
so has part: feature:1342565-1342692:1:exon
so has part: feature:1343106-1343219:1:exon
so has part: feature:1343594-1343677:1:exon

XP_003210916.2
type: Protein
SIO_000068: ncbiprotein

position:1333373:1
position: 1333373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1343677:1
position: 1343677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333373-1334095:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1334537-1334699:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1335953-1336095:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1336790-1337072:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1337500-1337697:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1338852-1338953:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1339992-1340090:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1341353-1341435:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1341697-1341797:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1342251-1342357:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1342565-1342692:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1343106-1343219:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1343594-1343677:1:exon

TRMT2A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRMT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1347807..1354783)
location: region:1347807-1354783:-1
so has part: feature:1347807-1354783:-1:exon
subclass of: SO_0000010

100546315
type: Gene
SIO_000068: ncbigene

position:1347807:-1
position: 1347807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354783:-1
position: 1354783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1347807-1354783:-1:exon

TRMT2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRMT2A
product: tRNA methyltransferase 2 homolog A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010719989.2
SIO_010081: TRMT2A
subclass of: SO_0000673
so part of: TRMT2A
location: complement(join(1347807..1348188,1348480..1348576,1348784..1348900,1349400..1349475,1350441..1350563,1351173..1351284,1351796..1351911,1352171..1352285,1352919..1353100,1353545..1353674,1354228..1354783))
location: region:1347807-1354783:-1
so has part: feature:1354228-1354783:-1:exon
so has part: feature:1353545-1353674:-1:exon
so has part: feature:1352919-1353100:-1:exon
so has part: feature:1352171-1352285:-1:exon
so has part: feature:1351796-1351911:-1:exon
so has part: feature:1351173-1351284:-1:exon
so has part: feature:1350441-1350563:-1:exon
so has part: feature:1349400-1349475:-1:exon
so has part: feature:1348784-1348900:-1:exon
so has part: feature:1348480-1348576:-1:exon
so has part: feature:1347807-1348188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1354228-1354783:-1:exon

position:1354228:-1
position: 1354228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1353545-1353674:-1:exon

position:1353545:-1
position: 1353545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353674:-1
position: 1353674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1352919-1353100:-1:exon

position:1352919:-1
position: 1352919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353100:-1
position: 1353100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1352171-1352285:-1:exon

position:1352171:-1
position: 1352171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352285:-1
position: 1352285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1351796-1351911:-1:exon

position:1351796:-1
position: 1351796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351911:-1
position: 1351911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1351173-1351284:-1:exon

position:1351173:-1
position: 1351173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1351284:-1
position: 1351284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1350441-1350563:-1:exon

position:1350441:-1
position: 1350441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1350563:-1
position: 1350563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1349400-1349475:-1:exon

position:1349400:-1
position: 1349400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1349475:-1
position: 1349475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1348784-1348900:-1:exon

position:1348784:-1
position: 1348784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348900:-1
position: 1348900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1348480-1348576:-1:exon

position:1348480:-1
position: 1348480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1348576:-1
position: 1348576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1347807-1348188:-1:exon

position:1348188:-1
position: 1348188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRMT2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRMT2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (uracil-5-)-methyltransferase homolog A
translation: MEAAEGGPDAYGYTRAELFTSEIYKVEIRNLPKYVGFNDVKKFLAKHGLSPHKIKLLGRQTFAFVTFRSEEQRDEAVRALHGAAWKGRALGVRAAKPKADPMARKRQREERDEAGEPLGKRIADVVTPLWAVPYEQQLAEKRQECERVVSDPGREIGNTNRALLPWLFLQKQKYNRMCCPIEGVKASPLQTEYRNKCEFLIGIGVNQEDKTVGCRLGKYKGGTCAVVEPFDTIHIPDVAKKVVKAFQDYIRSTPYSVYSPETYEGHWKQLTVRTSRNGHIMAIVYFNPQKLSREELADLKAALAKHFTEGAGKESSITSLYFVEEGQRKSPNLEDLPLEHVAGDKYIYEELLGLKFRISPHAFFQVNTQAAEVLYAAIREWAQLSQESTVLDICCGTGTIGISLAKKVKKVIGIELCQEAVQDAKANAQINELSNIEFHCGKAEDIVPSLINVLAPQNLITIVDPPRAGLHSKVILAIRRAEQLKKLIYVSCNPRAAMNNFVDLCRAPSNRVKGAAFRPVKAMAVDLFPQTKHCELLILFERVEYTNGSSAEAKPDAAQVAEAGDDSEHLDGANPADNDADQVASVATGTACKEKEPA
SIO_010081: TRMT2A
subclass of: SO_0000673
so part of: TRMT2A
location: complement(join(1347900..1348188,1348480..1348576,1348784..1348900,1349400..1349475,1350441..1350563,1351173..1351284,1351796..1351911,1352171..1352285,1352919..1353100,1353545..1353674,1354228..1354667))
location: region:1347900-1354667:-1
so has part: feature:1354228-1354667:-1:exon
so has part: feature:1353545-1353674:-1:exon
so has part: feature:1352919-1353100:-1:exon
so has part: feature:1352171-1352285:-1:exon
so has part: feature:1351796-1351911:-1:exon
so has part: feature:1351173-1351284:-1:exon
so has part: feature:1350441-1350563:-1:exon
so has part: feature:1349400-1349475:-1:exon
so has part: feature:1348784-1348900:-1:exon
so has part: feature:1348480-1348576:-1:exon
so has part: feature:1347900-1348188:-1:exon

XP_010718291.1
type: Protein
SIO_000068: ncbiprotein

position:1347900:-1
position: 1347900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354667:-1
position: 1354667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354228-1354667:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1353545-1353674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1352919-1353100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352171-1352285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1351796-1351911:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1351173-1351284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350441-1350563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1349400-1349475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1348784-1348900:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1348480-1348576:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1347900-1348188:-1:exon

RANBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RANBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1355655..1362595
location: region:1355655-1362595:1
so has part: feature:1355655-1362595:1:exon
subclass of: SO_0000010

109370281
type: Gene
SIO_000068: ncbigene

position:1355655:1
position: 1355655
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1362595:1
position: 1362595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1355655-1362595:1:exon

RANBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RANBP1
product: RAN binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019620912.2
SIO_010081: RANBP1
subclass of: SO_0000673
so part of: RANBP1
location: join(<1355655..1355780,1356563..1356699,1357862..1358019,1359908..1360036,1361093..1361158,1362237..1362595)
location: region:1355655-1362595:1
so has part: feature:1355655-1355780:1:exon
so has part: feature:1356563-1356699:1:exon
so has part: feature:1357862-1358019:1:exon
so has part: feature:1359908-1360036:1:exon
so has part: feature:1361093-1361158:1:exon
so has part: feature:1362237-1362595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1355655-1355780:1:exon

position:1355780:1
position: 1355780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1356563-1356699:1:exon

position:1356563:1
position: 1356563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356699:1
position: 1356699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1357862-1358019:1:exon

position:1357862:1
position: 1357862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358019:1
position: 1358019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1359908-1360036:1:exon

position:1359908:1
position: 1359908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360036:1
position: 1360036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1361093-1361158:1:exon

position:1361093:1
position: 1361093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361158:1
position: 1361158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1362237-1362595:1:exon

position:1362237:1
position: 1362237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RANBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RANBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ran-specific GTPase-activating protein
translation: ITESFLQRSFPFSFFRGSAALRAAPQPSAGPAGRERRACALREAHEEHDTSTENADDSNHDPQFEPIVSLPEQEIKTLEEDEEELFKMRAKLFRFASENDLPEWKERGTGDVKLLKHKEKGTIRLLMRRDKTLKICANHYITPLMELRPNAGSDRAWVWNTHADFADECPKPELLAIRFLNAENAQKFKAKFEECRNEVDKRAKKGTDQNDSADKVAEKLEELSVKEENKEAEKKETKENEEKQ
SIO_010081: RANBP1
subclass of: SO_0000673
so part of: RANBP1
location: join(<1355655..1355780,1356563..1356699,1357862..1358019,1359908..1360036,1361093..1361158,1362237..1362355)
location: region:1355655-1362355:1
so has part: feature:1355655-1355780:1:exon
so has part: feature:1356563-1356699:1:exon
so has part: feature:1357862-1358019:1:exon
so has part: feature:1359908-1360036:1:exon
so has part: feature:1361093-1361158:1:exon
so has part: feature:1362237-1362355:1:exon

XP_019476457.1
type: Protein
SIO_000068: ncbiprotein

position:1362355:1
position: 1362355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1355655-1355780:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1356563-1356699:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1357862-1358019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359908-1360036:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1361093-1361158:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1362237-1362355:1:exon

LOC116217281
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217281
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1361233..1361364
location: region:1361233-1361364:1
so has part: feature:1361233-1361364:1:exon
subclass of: SO_0000578

116217281
type: Gene
SIO_000068: ncbigene

position:1361233:1
position: 1361233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361364:1
position: 1361364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1361233-1361364:1:exon

LOC116217281
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217281
product: small nucleolar RNA SNORA77
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00599
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161630.1
SIO_010081: LOC116217281
subclass of: SO_0000673
so part of: LOC116217281
location: 1361233..1361364
location: region:1361233-1361364:1
so has part: feature:1361233-1361364:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1361233-1361364:1:exon

LOC104913524
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913524
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1401598..1414392
location: region:1401598-1414392:1
so has part: feature:1401598-1414392:1:exon
subclass of: SO_0000011

104913524
type: Gene
SIO_000068: ncbigene

position:1401598:1
position: 1401598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414392:1
position: 1414392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1401598-1414392:1:exon

LOC104913524
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913524
product: uncharacterized LOC104913524
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_795438.3
SIO_010081: LOC104913524
subclass of: SO_0000673
so part of: LOC104913524
location: join(1401598..1410100,1410189..1410216,1410766..1414392)
location: region:1401598-1414392:1
so has part: feature:1401598-1410100:1:exon
so has part: feature:1410189-1410216:1:exon
so has part: feature:1410766-1414392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1401598-1410100:1:exon

position:1410100:1
position: 1410100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1410189-1410216:1:exon

position:1410189:1
position: 1410189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410216:1
position: 1410216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1410766-1414392:1:exon

position:1410766:1
position: 1410766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZDHHC8
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ZDHHC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1430272..1456921
location: region:1430272-1456921:1
so has part: feature:1430272-1456921:1:exon
subclass of: SO_0000010

100546468
type: Gene
SIO_000068: ncbigene

position:1430272:1
position: 1430272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456921:1
position: 1456921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430272-1456921:1:exon

ZDHHC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZDHHC8
product: zinc finger DHHC-type palmitoyltransferase 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_031555928.1
SIO_010081: ZDHHC8
subclass of: SO_0000673
so part of: ZDHHC8
location: join(1430272..1430470,1434658..1434815,1437535..1437707,1438365..1438467,1441938..1442029,1443243..1443287,1443611..1443743,1444275..1444392,1445070..1445179,1447833..1448869,1450621..1456921)
location: region:1430272-1456921:1
so has part: feature:1430272-1430470:1:exon
so has part: feature:1434658-1434815:1:exon
so has part: feature:1437535-1437707:1:exon
so has part: feature:1438365-1438467:1:exon
so has part: feature:1441938-1442029:1:exon
so has part: feature:1443243-1443287:1:exon
so has part: feature:1443611-1443743:1:exon
so has part: feature:1444275-1444392:1:exon
so has part: feature:1445070-1445179:1:exon
so has part: feature:1447833-1448869:1:exon
so has part: feature:1450621-1456921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1430272-1430470:1:exon

position:1430470:1
position: 1430470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1434658-1434815:1:exon

position:1434658:1
position: 1434658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1434815:1
position: 1434815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1437535-1437707:1:exon

position:1437535:1
position: 1437535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437707:1
position: 1437707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1438365-1438467:1:exon

position:1438365:1
position: 1438365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438467:1
position: 1438467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1441938-1442029:1:exon

position:1441938:1
position: 1441938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1442029:1
position: 1442029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1443243-1443287:1:exon

position:1443243:1
position: 1443243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443287:1
position: 1443287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1443611-1443743:1:exon

position:1443611:1
position: 1443611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1443743:1
position: 1443743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1444275-1444392:1:exon

position:1444275:1
position: 1444275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444392:1
position: 1444392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1445070-1445179:1:exon

position:1445070:1
position: 1445070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1445179:1
position: 1445179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1447833-1448869:1:exon

position:1447833:1
position: 1447833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1448869:1
position: 1448869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1450621-1456921:1:exon

position:1450621:1
position: 1450621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZDHHC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZDHHC8
product: zinc finger DHHC-type palmitoyltransferase 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_031555929.1
SIO_010081: ZDHHC8
subclass of: SO_0000673
so part of: ZDHHC8
location: join(1430272..1430470,1434658..1434815,1437535..1437707,1438365..1438467,1441938..1442029,1443611..1443743,1444275..1444392,1445070..1445179,1447833..1448869,1450621..1456921)
location: region:1430272-1456921:1
so has part: feature:1430272-1430470:1:exon
so has part: feature:1434658-1434815:1:exon
so has part: feature:1437535-1437707:1:exon
so has part: feature:1438365-1438467:1:exon
so has part: feature:1441938-1442029:1:exon
so has part: feature:1443611-1443743:1:exon
so has part: feature:1444275-1444392:1:exon
so has part: feature:1445070-1445179:1:exon
so has part: feature:1447833-1448869:1:exon
so has part: feature:1450621-1456921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1430272-1430470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434658-1434815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437535-1437707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438365-1438467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441938-1442029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1443611-1443743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1444275-1444392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1445070-1445179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1447833-1448869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1450621-1456921:1:exon

ZDHHC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZDHHC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable palmitoyltransferase ZDHHC8 isoform X1
translation: MGRNCLIQPKEPSPVIFLLHRCPWLTKAISPAIPVYNGLVFLFVLANFSMATFMDPGVFPRADEDEDKDDDFRAPLYKNVEIKGIQVRMKWCATCHFYRPPRCSHCSVCDNCVEDFDHHCPWVNNCIGRRNYRYFFLFLLSLSTHMVGVFTFGLIFILNHMEKLGAAHTTITMAVMCVAGLFFIPVIGLTGFHIVLVARGRTTNEQVTGKFRGGVNPFTRGCCGNVEHVLCSPLAPSLLHLPLQGSCFMITRYIVEPKKKLAVSVKPPFLRPDLSERQITVKISDNGIQANLNRSKSKISLEGLEDKGMDVQTPLPSKGDQSKYSELKGQLGTSEESGLSPKLISPPTPAMYKYRPAFSNNPKVHYHAAAEQITLQEGHSQGALIEEDGRSLDYQSEPSLDIPSYRKSSLHKTYQSSPLQIDSFAINSRSLSLKSAGRRGTDKVPLHPMKSEGAASTPYKSIFSPNSLSNRNGSLSYDSLLNPMSPSGRKCVAHSAVSSVGYHSPYLSAKMCHLRGSELQRQPPQSFSPVLGGPAPHQRDPSPVRYDNLSKTIMASIQERKEMEEREKLLHSHPDSVFADSGVYDTPSSYSLQQVSTLSEDPRSMAMRYGSRDNLMAATSFSTRNPILQSSVSSLSSAMTRAPRTSTTSLQADLANNNVQTHQALQGRVSNGSYKSPGHQVPSSPTGMPRSPSYGGPKAVSFVNTVEITEVQSVGAQRDDIQMKTPHSKINGQPKGISRLGSTSSSQGTPVSPARHSNVKKVSGVGGTTYEISV
SIO_010081: ZDHHC8
subclass of: SO_0000673
so part of: ZDHHC8
location: join(1430287..1430470,1434658..1434815,1437535..1437707,1438365..1438467,1441938..1442029,1443243..1443287,1443611..1443743,1444275..1444392,1445070..1445179,1447833..1448869,1450621..1450792)
location: region:1430287-1450792:1
so has part: feature:1430287-1430470:1:exon
so has part: feature:1434658-1434815:1:exon
so has part: feature:1437535-1437707:1:exon
so has part: feature:1438365-1438467:1:exon
so has part: feature:1441938-1442029:1:exon
so has part: feature:1443243-1443287:1:exon
so has part: feature:1443611-1443743:1:exon
so has part: feature:1444275-1444392:1:exon
so has part: feature:1445070-1445179:1:exon
so has part: feature:1447833-1448869:1:exon
so has part: feature:1450621-1450792:1:exon

XP_031411788.1
type: Protein
SIO_000068: ncbiprotein

position:1430287:1
position: 1430287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450792:1
position: 1450792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1430287-1430470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434658-1434815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437535-1437707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438365-1438467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441938-1442029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1443243-1443287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1443611-1443743:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1444275-1444392:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1445070-1445179:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1447833-1448869:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1450621-1450792:1:exon

ZDHHC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZDHHC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable palmitoyltransferase ZDHHC8 isoform X2
translation: MGRNCLIQPKEPSPVIFLLHRCPWLTKAISPAIPVYNGLVFLFVLANFSMATFMDPGVFPRADEDEDKDDDFRAPLYKNVEIKGIQVRMKWCATCHFYRPPRCSHCSVCDNCVEDFDHHCPWVNNCIGRRNYRYFFLFLLSLSTHMVGVFTFGLIFILNHMEKLGAAHTTITMAVMCVAGLFFIPVIGLTGFHIVLVARGRTTNEQVTGKFRGGVNPFTRGCCGNVEHVLCSPLAPRYIVEPKKKLAVSVKPPFLRPDLSERQITVKISDNGIQANLNRSKSKISLEGLEDKGMDVQTPLPSKGDQSKYSELKGQLGTSEESGLSPKLISPPTPAMYKYRPAFSNNPKVHYHAAAEQITLQEGHSQGALIEEDGRSLDYQSEPSLDIPSYRKSSLHKTYQSSPLQIDSFAINSRSLSLKSAGRRGTDKVPLHPMKSEGAASTPYKSIFSPNSLSNRNGSLSYDSLLNPMSPSGRKCVAHSAVSSVGYHSPYLSAKMCHLRGSELQRQPPQSFSPVLGGPAPHQRDPSPVRYDNLSKTIMASIQERKEMEEREKLLHSHPDSVFADSGVYDTPSSYSLQQVSTLSEDPRSMAMRYGSRDNLMAATSFSTRNPILQSSVSSLSSAMTRAPRTSTTSLQADLANNNVQTHQALQGRVSNGSYKSPGHQVPSSPTGMPRSPSYGGPKAVSFVNTVEITEVQSVGAQRDDIQMKTPHSKINGQPKGISRLGSTSSSQGTPVSPARHSNVKKVSGVGGTTYEISV
SIO_010081: ZDHHC8
subclass of: SO_0000673
so part of: ZDHHC8
location: join(1430287..1430470,1434658..1434815,1437535..1437707,1438365..1438467,1441938..1442029,1443611..1443743,1444275..1444392,1445070..1445179,1447833..1448869,1450621..1450792)
location: region:1430287-1450792:1
so has part: feature:1430287-1430470:1:exon
so has part: feature:1434658-1434815:1:exon
so has part: feature:1437535-1437707:1:exon
so has part: feature:1438365-1438467:1:exon
so has part: feature:1441938-1442029:1:exon
so has part: feature:1443611-1443743:1:exon
so has part: feature:1444275-1444392:1:exon
so has part: feature:1445070-1445179:1:exon
so has part: feature:1447833-1448869:1:exon
so has part: feature:1450621-1450792:1:exon

XP_031411789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1430287-1430470:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1434658-1434815:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1437535-1437707:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1438365-1438467:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1441938-1442029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1443611-1443743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1444275-1444392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1445070-1445179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1447833-1448869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1450621-1450792:1:exon

ZDHHC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZDHHC8
product: zinc finger DHHC-type palmitoyltransferase 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019620968.2
SIO_010081: ZDHHC8
subclass of: SO_0000673
so part of: ZDHHC8
location: join(1434728..1434815,1436156..1437707,1438365..1438467,1441938..1442029,1443243..1443287,1443611..1443743,1444275..1444392,1445070..1445179,1447833..1448869,1450621..1456921)
location: region:1434728-1456921:1
so has part: feature:1434728-1434815:1:exon
so has part: feature:1436156-1437707:1:exon
so has part: feature:1438365-1438467:1:exon
so has part: feature:1441938-1442029:1:exon
so has part: feature:1443243-1443287:1:exon
so has part: feature:1443611-1443743:1:exon
so has part: feature:1444275-1444392:1:exon
so has part: feature:1445070-1445179:1:exon
so has part: feature:1447833-1448869:1:exon
so has part: feature:1450621-1456921:1:exon

position:1434728:1
position: 1434728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434728-1434815:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1436156-1437707:1:exon

position:1436156:1
position: 1436156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1438365-1438467:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1441938-1442029:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1443243-1443287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1443611-1443743:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1444275-1444392:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1445070-1445179:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1447833-1448869:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1450621-1456921:1:exon

ZDHHC8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZDHHC8
product: zinc finger DHHC-type palmitoyltransferase 8, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_031555930.1
SIO_010081: ZDHHC8
subclass of: SO_0000673
so part of: ZDHHC8
location: join(1434830..1437707,1438365..1438467,1441938..1442029,1443243..1443287,1443611..1443743,1444275..1444392,1445070..1445179,1447833..1448869,1450621..1456921)
location: region:1434830-1456921:1
so has part: feature:1434830-1437707:1:exon
so has part: feature:1438365-1438467:1:exon
so has part: feature:1441938-1442029:1:exon
so has part: feature:1443243-1443287:1:exon
so has part: feature:1443611-1443743:1:exon
so has part: feature:1444275-1444392:1:exon
so has part: feature:1445070-1445179:1:exon
so has part: feature:1447833-1448869:1:exon
so has part: feature:1450621-1456921:1:exon

position:1434830:1
position: 1434830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1434830-1437707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1438365-1438467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441938-1442029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443243-1443287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1443611-1443743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1444275-1444392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1445070-1445179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1447833-1448869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450621-1456921:1:exon

ZDHHC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZDHHC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable palmitoyltransferase ZDHHC8 isoform X3
translation: MVGVFTFGLIFILNHMEKLGAAHTTITMAVMCVAGLFFIPVIGLTGFHIVLVARGRTTNEQVTGKFRGGVNPFTRGCCGNVEHVLCSPLAPSLLHLPLQGSCFMITRYIVEPKKKLAVSVKPPFLRPDLSERQITVKISDNGIQANLNRSKSKISLEGLEDKGMDVQTPLPSKGDQSKYSELKGQLGTSEESGLSPKLISPPTPAMYKYRPAFSNNPKVHYHAAAEQITLQEGHSQGALIEEDGRSLDYQSEPSLDIPSYRKSSLHKTYQSSPLQIDSFAINSRSLSLKSAGRRGTDKVPLHPMKSEGAASTPYKSIFSPNSLSNRNGSLSYDSLLNPMSPSGRKCVAHSAVSSVGYHSPYLSAKMCHLRGSELQRQPPQSFSPVLGGPAPHQRDPSPVRYDNLSKTIMASIQERKEMEEREKLLHSHPDSVFADSGVYDTPSSYSLQQVSTLSEDPRSMAMRYGSRDNLMAATSFSTRNPILQSSVSSLSSAMTRAPRTSTTSLQADLANNNVQTHQALQGRVSNGSYKSPGHQVPSSPTGMPRSPSYGGPKAVSFVNTVEITEVQSVGAQRDDIQMKTPHSKINGQPKGISRLGSTSSSQGTPVSPARHSNVKKVSGVGGTTYEISV
SIO_010081: ZDHHC8
subclass of: SO_0000673
so part of: ZDHHC8
location: join(1437628..1437707,1438365..1438467,1441938..1442029,1443243..1443287,1443611..1443743,1444275..1444392,1445070..1445179,1447833..1448869,1450621..1450792)
location: region:1437628-1450792:1
so has part: feature:1437628-1437707:1:exon
so has part: feature:1438365-1438467:1:exon
so has part: feature:1441938-1442029:1:exon
so has part: feature:1443243-1443287:1:exon
so has part: feature:1443611-1443743:1:exon
so has part: feature:1444275-1444392:1:exon
so has part: feature:1445070-1445179:1:exon
so has part: feature:1447833-1448869:1:exon
so has part: feature:1450621-1450792:1:exon

XP_019476513.1
type: Protein
SIO_000068: ncbiprotein

position:1437628:1
position: 1437628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1437628-1437707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1438365-1438467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441938-1442029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443243-1443287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1443611-1443743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1444275-1444392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1445070-1445179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1447833-1448869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450621-1450792:1:exon

ZDHHC8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZDHHC8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable palmitoyltransferase ZDHHC8 isoform X3
translation: MVGVFTFGLIFILNHMEKLGAAHTTITMAVMCVAGLFFIPVIGLTGFHIVLVARGRTTNEQVTGKFRGGVNPFTRGCCGNVEHVLCSPLAPSLLHLPLQGSCFMITRYIVEPKKKLAVSVKPPFLRPDLSERQITVKISDNGIQANLNRSKSKISLEGLEDKGMDVQTPLPSKGDQSKYSELKGQLGTSEESGLSPKLISPPTPAMYKYRPAFSNNPKVHYHAAAEQITLQEGHSQGALIEEDGRSLDYQSEPSLDIPSYRKSSLHKTYQSSPLQIDSFAINSRSLSLKSAGRRGTDKVPLHPMKSEGAASTPYKSIFSPNSLSNRNGSLSYDSLLNPMSPSGRKCVAHSAVSSVGYHSPYLSAKMCHLRGSELQRQPPQSFSPVLGGPAPHQRDPSPVRYDNLSKTIMASIQERKEMEEREKLLHSHPDSVFADSGVYDTPSSYSLQQVSTLSEDPRSMAMRYGSRDNLMAATSFSTRNPILQSSVSSLSSAMTRAPRTSTTSLQADLANNNVQTHQALQGRVSNGSYKSPGHQVPSSPTGMPRSPSYGGPKAVSFVNTVEITEVQSVGAQRDDIQMKTPHSKINGQPKGISRLGSTSSSQGTPVSPARHSNVKKVSGVGGTTYEISV
SIO_010081: ZDHHC8
subclass of: SO_0000673
so part of: ZDHHC8
location: join(1437628..1437707,1438365..1438467,1441938..1442029,1443243..1443287,1443611..1443743,1444275..1444392,1445070..1445179,1447833..1448869,1450621..1450792)
location: region:1437628-1450792:1
so has part: feature:1437628-1437707:1:exon
so has part: feature:1438365-1438467:1:exon
so has part: feature:1441938-1442029:1:exon
so has part: feature:1443243-1443287:1:exon
so has part: feature:1443611-1443743:1:exon
so has part: feature:1444275-1444392:1:exon
so has part: feature:1445070-1445179:1:exon
so has part: feature:1447833-1448869:1:exon
so has part: feature:1450621-1450792:1:exon

XP_031411790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1437628-1437707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1438365-1438467:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1441938-1442029:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1443243-1443287:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1443611-1443743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1444275-1444392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1445070-1445179:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1447833-1448869:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1450621-1450792:1:exon

PGAM5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PGAM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1464640..1470781
location: region:1464640-1470781:1
so has part: feature:1464640-1470781:1:exon
subclass of: SO_0000010

100546615
type: Gene
SIO_000068: ncbigene

position:1464640:1
position: 1464640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470781:1
position: 1470781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1464640-1470781:1:exon

PGAM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PGAM5
product: PGAM family member 5, mitochondrial serine/threonine protein phosphatase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_031555931.1
SIO_010081: PGAM5
subclass of: SO_0000673
so part of: PGAM5
location: join(1464640..1464775,1464885..1464925,1465547..1465725,1466132..1466257,1466662..1466750,1467046..1467176,1469029..1470781)
location: region:1464640-1470781:1
so has part: feature:1464640-1464775:1:exon
so has part: feature:1464885-1464925:1:exon
so has part: feature:1465547-1465725:1:exon
so has part: feature:1466132-1466257:1:exon
so has part: feature:1466662-1466750:1:exon
so has part: feature:1467046-1467176:1:exon
so has part: feature:1469029-1470781:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1464640-1464775:1:exon

position:1464775:1
position: 1464775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1464885-1464925:1:exon

position:1464885:1
position: 1464885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1464925:1
position: 1464925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1465547-1465725:1:exon

position:1465547:1
position: 1465547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1465725:1
position: 1465725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1466132-1466257:1:exon

position:1466132:1
position: 1466132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466257:1
position: 1466257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1466662-1466750:1:exon

position:1466662:1
position: 1466662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1466750:1
position: 1466750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1467046-1467176:1:exon

position:1467046:1
position: 1467046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1467176:1
position: 1467176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1469029-1470781:1:exon

position:1469029:1
position: 1469029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PGAM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PGAM5
product: PGAM family member 5, mitochondrial serine/threonine protein phosphatase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_003210870.4
SIO_010081: PGAM5
subclass of: SO_0000673
so part of: PGAM5
location: join(1464644..1464775,1464885..1464925,1465547..1465725,1466132..1466257,1466662..1466750,1467043..1467176,1469029..1470781)
location: region:1464644-1470781:1
so has part: feature:1464644-1464775:1:exon
so has part: feature:1464885-1464925:1:exon
so has part: feature:1465547-1465725:1:exon
so has part: feature:1466132-1466257:1:exon
so has part: feature:1466662-1466750:1:exon
so has part: feature:1467043-1467176:1:exon
so has part: feature:1469029-1470781:1:exon

position:1464644:1
position: 1464644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1464644-1464775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1464885-1464925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465547-1465725:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466132-1466257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466662-1466750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467043-1467176:1:exon

position:1467043:1
position: 1467043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1469029-1470781:1:exon

PGAM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PGAM5
product: PGAM family member 5, mitochondrial serine/threonine protein phosphatase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_010719992.3
SIO_010081: PGAM5
subclass of: SO_0000673
so part of: PGAM5
location: join(1464644..1464775,1464888..1464925,1465547..1465725,1466132..1466257,1466662..1466750,1467043..1467176,1469029..1470781)
location: region:1464644-1470781:1
so has part: feature:1464644-1464775:1:exon
so has part: feature:1464888-1464925:1:exon
so has part: feature:1465547-1465725:1:exon
so has part: feature:1466132-1466257:1:exon
so has part: feature:1466662-1466750:1:exon
so has part: feature:1467043-1467176:1:exon
so has part: feature:1469029-1470781:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1464644-1464775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1464888-1464925:1:exon

position:1464888:1
position: 1464888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1465547-1465725:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466132-1466257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466662-1466750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467043-1467176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1469029-1470781:1:exon

PGAM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PGAM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X1
translation: MLDVSVQGWTDRLWAYLKSRCSAALSEQKEACTKEAVIEARREPLALINLKKKNEETGEEELSSRLEHCRARATRHIFLIRHSQYNLDGRADKDRTLTPLGREQAELTGHRLASLGLKFNQIIHSSMTRATETTEIISKYLPGVKKISTDLLREGAPIEPDPPVSHWKPEAVQYYEDGARIEAAFRNFIHRADVKQEEDSYEIFVCHANVIRYIVCRALQFPPEGWLRMSLNNGSITHLVIRPNGRVALRTLGDTGFMPPDKITRT
SIO_010081: PGAM5
subclass of: SO_0000673
so part of: PGAM5
location: join(1464695..1464775,1464885..1464925,1465547..1465725,1466132..1466257,1466662..1466750,1467043..1467176,1469029..1469179)
location: region:1464695-1469179:1
so has part: feature:1464695-1464775:1:exon
so has part: feature:1464885-1464925:1:exon
so has part: feature:1465547-1465725:1:exon
so has part: feature:1466132-1466257:1:exon
so has part: feature:1466662-1466750:1:exon
so has part: feature:1467043-1467176:1:exon
so has part: feature:1469029-1469179:1:exon

XP_003210918.2
type: Protein
SIO_000068: ncbiprotein

position:1464695:1
position: 1464695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1469179:1
position: 1469179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1464695-1464775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1464885-1464925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465547-1465725:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466132-1466257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466662-1466750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467043-1467176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1469029-1469179:1:exon

PGAM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PGAM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X3
translation: MLDVSVQGWTDRLWAYLKSRCSAALSEQKEACTKEAVIEARREPLALINLKKKNEETGEEELSSRLEHCRARATRHIFLIRHSQYNLDGRADKDRTLTPLGREQAELTGHRLASLGLKFNQIIHSSMTRATETTEIISKYLPGVKKISTDLLREGAPIEPDPPVSHWKPEAVYYEDGARIEAAFRNFIHRADVKQEEDSYEIFVCHANVIRYIVCRALQFPPEGWLRMSLNNGSITHLVIRPNGRVALRTLGDTGFMPPDKITRT
SIO_010081: PGAM5
subclass of: SO_0000673
so part of: PGAM5
location: join(1464695..1464775,1464885..1464925,1465547..1465725,1466132..1466257,1466662..1466750,1467046..1467176,1469029..1469179)
location: region:1464695-1469179:1
so has part: feature:1464695-1464775:1:exon
so has part: feature:1464885-1464925:1:exon
so has part: feature:1465547-1465725:1:exon
so has part: feature:1466132-1466257:1:exon
so has part: feature:1466662-1466750:1:exon
so has part: feature:1467046-1467176:1:exon
so has part: feature:1469029-1469179:1:exon

XP_031411791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1464695-1464775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1464885-1464925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465547-1465725:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466132-1466257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466662-1466750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467046-1467176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1469029-1469179:1:exon

PGAM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PGAM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase PGAM5, mitochondrial isoform X2
translation: MLDVSVQGWTDRLWAYLKSRCSAALSEKEACTKEAVIEARREPLALINLKKKNEETGEEELSSRLEHCRARATRHIFLIRHSQYNLDGRADKDRTLTPLGREQAELTGHRLASLGLKFNQIIHSSMTRATETTEIISKYLPGVKKISTDLLREGAPIEPDPPVSHWKPEAVQYYEDGARIEAAFRNFIHRADVKQEEDSYEIFVCHANVIRYIVCRALQFPPEGWLRMSLNNGSITHLVIRPNGRVALRTLGDTGFMPPDKITRT
SIO_010081: PGAM5
subclass of: SO_0000673
so part of: PGAM5
location: join(1464695..1464775,1464888..1464925,1465547..1465725,1466132..1466257,1466662..1466750,1467043..1467176,1469029..1469179)
location: region:1464695-1469179:1
so has part: feature:1464695-1464775:1:exon
so has part: feature:1464888-1464925:1:exon
so has part: feature:1465547-1465725:1:exon
so has part: feature:1466132-1466257:1:exon
so has part: feature:1466662-1466750:1:exon
so has part: feature:1467043-1467176:1:exon
so has part: feature:1469029-1469179:1:exon

XP_010718294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1464695-1464775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1464888-1464925:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1465547-1465725:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1466132-1466257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1466662-1466750:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1467043-1467176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1469029-1469179:1:exon

ANKLE2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ANKLE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1471634..1485091)
location: region:1471634-1485091:-1
so has part: feature:1471634-1485091:-1:exon
subclass of: SO_0000010

100546770
type: Gene
SIO_000068: ncbigene

position:1471634:-1
position: 1471634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485091:-1
position: 1485091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471634-1485091:-1:exon

ANKLE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ANKLE2
product: ankyrin repeat and LEM domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_010719991.3
SIO_010081: ANKLE2
subclass of: SO_0000673
so part of: ANKLE2
location: complement(join(1471634..1474553,1476190..1476321,1476880..1477606,1478064..1478257,1479124..1479230,1480330..1480511,1481181..1481247,1481616..1481738,1482007..1482195,1482371..1482564,1483149..1483340,1484596..1485091))
location: region:1471634-1485091:-1
so has part: feature:1484596-1485091:-1:exon
so has part: feature:1483149-1483340:-1:exon
so has part: feature:1482371-1482564:-1:exon
so has part: feature:1482007-1482195:-1:exon
so has part: feature:1481616-1481738:-1:exon
so has part: feature:1481181-1481247:-1:exon
so has part: feature:1480330-1480511:-1:exon
so has part: feature:1479124-1479230:-1:exon
so has part: feature:1478064-1478257:-1:exon
so has part: feature:1476880-1477606:-1:exon
so has part: feature:1476190-1476321:-1:exon
so has part: feature:1471634-1474553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1484596-1485091:-1:exon

position:1484596:-1
position: 1484596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1483149-1483340:-1:exon

position:1483149:-1
position: 1483149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483340:-1
position: 1483340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1482371-1482564:-1:exon

position:1482371:-1
position: 1482371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482564:-1
position: 1482564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1482007-1482195:-1:exon

position:1482007:-1
position: 1482007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482195:-1
position: 1482195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1481616-1481738:-1:exon

position:1481616:-1
position: 1481616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481738:-1
position: 1481738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1481181-1481247:-1:exon

position:1481181:-1
position: 1481181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481247:-1
position: 1481247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1480330-1480511:-1:exon

position:1480330:-1
position: 1480330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480511:-1
position: 1480511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1479124-1479230:-1:exon

position:1479124:-1
position: 1479124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479230:-1
position: 1479230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1478064-1478257:-1:exon

position:1478064:-1
position: 1478064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478257:-1
position: 1478257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1476880-1477606:-1:exon

position:1476880:-1
position: 1476880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477606:-1
position: 1477606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1476190-1476321:-1:exon

position:1476190:-1
position: 1476190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476321:-1
position: 1476321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1471634-1474553:-1:exon

position:1474553:-1
position: 1474553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKLE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ANKLE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and LEM domain-containing protein 2
translation: MDAILSRLKQLSPDELREEVVRAGLKCGPVTSTTRFIFEKKLAQFLLEQQGTLEEEGSAWSEGAAGSDPSDGTHTALKSAAANHNHHGSVSEEVDFGYCVGLNPPEEEAVAHVNCSAPACGAGHVGSQGSAQTPSRDPPLYYGVCPVYDDILARNERIHVYEDKKEALQAVKMIKGSRFKAFSNREDAEKFAKGICDYFPSPSKSSLCLSPMKTGALNRDGLCSLEMETANKERANSYKSPRTQDLTAKLRKAVEKGDVSTFSELIWSNPRYLIGSGDNPTVVQEGCRYNVMHVAAKENQPAICQQLLETLENPEFMRLMYPDDDNTMLRNRIRYIVDLYLNTPDKMGFDTPLHFACKFGNLDVVNVLTSHPAIVKNSRNKYDQTPAEVVCERSKNKSAELKEKLREYLKGRYYVPLLRAEDNSSAPVIGAPWSPDQTDENPQAALSKYPGSPKDPVLSIRAFAGPMSPSKAEEFRRLWKTPPRERAGFFHNVRKSDLERGVERVGRELAHELGFPWVEYWEFLGCFVDLSSQEGLRKLEEYLSHREMSEKAQQETGENETCNRYKTPHPSGKSKKCCNSISVGAFLDEDDDDMSLEEIKNRQNAARNNSPPVVLKEPSIDAIGDAECEILSMEHPRNIIETSAQPRLYEKGVSSSKNGFCNPVASERIIGDRKHVHDGEDCLVSPVCNLMSEFESLTFQPQAGAGESNTISERIKNERILPERTSQVRIPKDWLDKSCYAVSPASSSEPSVTGKPGETKLRTEYKMQSERERLSMESGIQTNEAQQSQEPPAQKFLLKTSPANDNSKKLFLLGERPSKLDSDVLAAIEAVQIDSQKYPAIYRWKHEVQSYSSADRQSWPSPSLKGRFRSQSATACPPNASVYSSPGRNSPMTGSPGKHGNAASFSPDLGSPGRYSPACVNHSVLKMRYFSEPPAH
SIO_010081: ANKLE2
subclass of: SO_0000673
so part of: ANKLE2
location: complement(join(1474316..1474553,1476190..1476321,1476880..1477606,1478064..1478257,1479124..1479230,1480330..1480511,1481181..1481247,1481616..1481738,1482007..1482195,1482371..1482564,1483149..1483340,1484596..1485061))
location: region:1474316-1485061:-1
so has part: feature:1484596-1485061:-1:exon
so has part: feature:1483149-1483340:-1:exon
so has part: feature:1482371-1482564:-1:exon
so has part: feature:1482007-1482195:-1:exon
so has part: feature:1481616-1481738:-1:exon
so has part: feature:1481181-1481247:-1:exon
so has part: feature:1480330-1480511:-1:exon
so has part: feature:1479124-1479230:-1:exon
so has part: feature:1478064-1478257:-1:exon
so has part: feature:1476880-1477606:-1:exon
so has part: feature:1476190-1476321:-1:exon
so has part: feature:1474316-1474553:-1:exon

XP_010718293.1
type: Protein
SIO_000068: ncbiprotein

position:1474316:-1
position: 1474316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485061:-1
position: 1485061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1484596-1485061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1483149-1483340:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482371-1482564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1482007-1482195:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1481616-1481738:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1481181-1481247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1480330-1480511:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1479124-1479230:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1478064-1478257:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1476880-1477606:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1476190-1476321:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1474316-1474553:-1:exon

GOLGA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GOLGA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1489262..1515354)
location: region:1489262-1515354:-1
so has part: feature:1489262-1515354:-1:exon
subclass of: SO_0000010

100546923
type: Gene
SIO_000068: ncbigene

position:1489262:-1
position: 1489262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515354:-1
position: 1515354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1489262-1515354:-1:exon

GOLGA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: GOLGA3
product: golgin A3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XR_004161555.1
SIO_010081: GOLGA3
so part of: GOLGA3
location: complement(join(1489262..1490713,1492510..1492599,1493290..1493533,1494533..1494687,1495573..1495737,1496128..1496250,1496454..1496586,1497367..1497506,1497933..1498049,1498559..1498756,1499329..1499472,1499886..1500102,1500876..1500970,1501472..1501735,1502614..1502691,1503862..1504230,1504677..1504838,1505439..1505576,1505952..1506154,1506740..1507046,1507580..1507691,1508808..1509502,1510618..1510730,1511563..1511844,1514977..1515354))
location: region:1489262-1515354:-1
so has part: feature:1514977-1515354:-1:exon
so has part: feature:1511563-1511844:-1:exon
so has part: feature:1510618-1510730:-1:exon
so has part: feature:1508808-1509502:-1:exon
so has part: feature:1507580-1507691:-1:exon
so has part: feature:1506740-1507046:-1:exon
so has part: feature:1505952-1506154:-1:exon
so has part: feature:1505439-1505576:-1:exon
so has part: feature:1504677-1504838:-1:exon
so has part: feature:1503862-1504230:-1:exon
so has part: feature:1502614-1502691:-1:exon
so has part: feature:1501472-1501735:-1:exon
so has part: feature:1500876-1500970:-1:exon
so has part: feature:1499886-1500102:-1:exon
so has part: feature:1499329-1499472:-1:exon
so has part: feature:1498559-1498756:-1:exon
so has part: feature:1497933-1498049:-1:exon
so has part: feature:1497367-1497506:-1:exon
so has part: feature:1496454-1496586:-1:exon
so has part: feature:1496128-1496250:-1:exon
so has part: feature:1495573-1495737:-1:exon
so has part: feature:1494533-1494687:-1:exon
so has part: feature:1493290-1493533:-1:exon
so has part: feature:1492510-1492599:-1:exon
so has part: feature:1489262-1490713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1514977-1515354:-1:exon

position:1514977:-1
position: 1514977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1511563-1511844:-1:exon

position:1511563:-1
position: 1511563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511844:-1
position: 1511844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1510618-1510730:-1:exon

position:1510618:-1
position: 1510618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1510730:-1
position: 1510730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1508808-1509502:-1:exon

position:1508808:-1
position: 1508808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1509502:-1
position: 1509502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1507580-1507691:-1:exon

position:1507580:-1
position: 1507580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1507691:-1
position: 1507691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1506740-1507046:-1:exon

position:1506740:-1
position: 1506740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1507046:-1
position: 1507046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1505952-1506154:-1:exon

position:1505952:-1
position: 1505952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506154:-1
position: 1506154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1505439-1505576:-1:exon

position:1505439:-1
position: 1505439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1505576:-1
position: 1505576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1504677-1504838:-1:exon

position:1504677:-1
position: 1504677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504838:-1
position: 1504838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1503862-1504230:-1:exon

position:1503862:-1
position: 1503862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1504230:-1
position: 1504230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1502614-1502691:-1:exon

position:1502614:-1
position: 1502614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502691:-1
position: 1502691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1501472-1501735:-1:exon

position:1501472:-1
position: 1501472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501735:-1
position: 1501735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1500876-1500970:-1:exon

position:1500876:-1
position: 1500876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500970:-1
position: 1500970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1499886-1500102:-1:exon

position:1499886:-1
position: 1499886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500102:-1
position: 1500102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1499329-1499472:-1:exon

position:1499329:-1
position: 1499329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499472:-1
position: 1499472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1498559-1498756:-1:exon

position:1498559:-1
position: 1498559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498756:-1
position: 1498756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1497933-1498049:-1:exon

position:1497933:-1
position: 1497933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1498049:-1
position: 1498049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1497367-1497506:-1:exon

position:1497367:-1
position: 1497367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1497506:-1
position: 1497506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1496454-1496586:-1:exon

position:1496454:-1
position: 1496454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496586:-1
position: 1496586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1496128-1496250:-1:exon

position:1496128:-1
position: 1496128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1496250:-1
position: 1496250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1495573-1495737:-1:exon

position:1495573:-1
position: 1495573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1495737:-1
position: 1495737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1494533-1494687:-1:exon

position:1494533:-1
position: 1494533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1494687:-1
position: 1494687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1493290-1493533:-1:exon

position:1493290:-1
position: 1493290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1493533:-1
position: 1493533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1492510-1492599:-1:exon

position:1492510:-1
position: 1492510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1492599:-1
position: 1492599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1489262-1490713:-1:exon

position:1490713:-1
position: 1490713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLGA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: GOLGA3
product: golgin A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XR_004161554.1
SIO_010081: GOLGA3
so part of: GOLGA3
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GOLGA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GOLGA3
product: golgin A3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_010719995.3
SIO_010081: GOLGA3
subclass of: SO_0000673
so part of: GOLGA3
location: complement(join(1489266..1492599,1493290..1493533,1494533..1494687,1495573..1495737,1496128..1496250,1496454..1496586,1497367..1497506,1497933..1498049,1498559..1498756,1499329..1499472,1499886..1500102,1500876..1500970,1501472..1501735,1502614..1502691,1503862..1504230,1504677..1504838,1505439..1505576,1505952..1506154,1506740..1507046,1507580..1507691,1508808..1509502,1510618..1510730,1511563..1511844,1514977..1515354))
location: region:1489266-1515354:-1
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position:1489266:-1
position: 1489266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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GOLGA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GOLGA3
product: golgin A3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019620971.2
SIO_010081: GOLGA3
subclass of: SO_0000673
so part of: GOLGA3
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location: region:1491148-1515354:-1
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position:1491148:-1
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type: ReverseStrandPosition
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GOLGA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GOLGA3
product: golgin A3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XM_010719997.3
SIO_010081: GOLGA3
subclass of: SO_0000673
so part of: GOLGA3
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location: region:1491148-1515354:-1
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position:1511686:-1
position: 1511686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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GOLGA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GOLGA3
product: golgin A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_010719994.3
SIO_010081: GOLGA3
subclass of: SO_0000673
so part of: GOLGA3
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location: region:1491148-1515354:-1
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urn:…
SIO_000300: 20
SIO_000628: feature:1496128-1496250:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1495573-1495737:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1494533-1494687:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1491148-1493533:-1:exon

GOLGA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GOLGA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 3 isoform X3
translation: MESSSMQQDVLLDNRSSSGAPGTSQEHGDYNAKSALCVTGDEVNSSVESSLPLENEEQIRLQARRRLEEQLRQYRVKRHQERSNQSTSKSRPSSTLDPELMLNPEILPRASTVAMTKEYSFLRTSVPRGPKLGSLGLPASSKERKSSKSSKSSKIRSLADYRTEDSGSGSSAGNLAATDLPGGTLKQSRSGPASVVSEISLPFDTDDRIEDSSLAGDSISEIDGSEVGMRLDGNESDSSTYSSVSGKGLYNNLPNSEGKQRIPYTINGQKIHPDAIGQFPSIGEVLQAAAVEHQAQEQEFNGEIRSRRDSISSSVSMESSVAGTHDEMLQVLKEKMRLEGQLEALSVEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQNQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTETQHRSIKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTVTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQEQLDEGTKRLGEDTEVTSEILEQLRQEMAIKSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLESEHSKLQKEVTEVRQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKRLDEKLSEQPLVSQEVEDLKWEVVQKEREIETLKQQLDMSEQRSHKELEGMQVVLQNIKTELEMVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKGENNSSNPVTPVKIPDCPVPAALLEELLKPSTAVSKEPLKNLNSCLRQLKQEMDSLQRQMEEHTITVHESMSSWTQIEEQLMDFTSTSPATASEQQERPALVEKKQNCDVSDKEALTL
SIO_010081: GOLGA3
subclass of: SO_0000673
so part of: GOLGA3
location: complement(join(1493326..1493533,1494533..1494687,1495573..1495737,1496128..1496250,1496454..1496586,1497367..1497506,1497933..1498049,1498559..1498756,1499329..1499472,1499886..1500102,1500876..1500970,1501472..1501735,1502614..1502691,1503862..1504230,1504677..1504838,1505439..1505576,1505952..1506154,1506740..1507046,1507580..1507691,1508808..1509502,1510618..1510730,1514977..1515109))
location: region:1493326-1515109:-1
so has part: feature:1514977-1515109:-1:exon
so has part: feature:1510618-1510730:-1:exon
so has part: feature:1508808-1509502:-1:exon
so has part: feature:1507580-1507691:-1:exon
so has part: feature:1506740-1507046:-1:exon
so has part: feature:1505952-1506154:-1:exon
so has part: feature:1505439-1505576:-1:exon
so has part: feature:1504677-1504838:-1:exon
so has part: feature:1503862-1504230:-1:exon
so has part: feature:1502614-1502691:-1:exon
so has part: feature:1501472-1501735:-1:exon
so has part: feature:1500876-1500970:-1:exon
so has part: feature:1499886-1500102:-1:exon
so has part: feature:1499329-1499472:-1:exon
so has part: feature:1498559-1498756:-1:exon
so has part: feature:1497933-1498049:-1:exon
so has part: feature:1497367-1497506:-1:exon
so has part: feature:1496454-1496586:-1:exon
so has part: feature:1496128-1496250:-1:exon
so has part: feature:1495573-1495737:-1:exon
so has part: feature:1494533-1494687:-1:exon
so has part: feature:1493326-1493533:-1:exon

XP_019476516.1
type: Protein
SIO_000068: ncbiprotein

position:1493326:-1
position: 1493326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515109:-1
position: 1515109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1514977-1515109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1510618-1510730:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1508808-1509502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1507580-1507691:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1506740-1507046:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1505952-1506154:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1505439-1505576:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1504677-1504838:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1503862-1504230:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1502614-1502691:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1501472-1501735:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1500876-1500970:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1499886-1500102:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1499329-1499472:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1498559-1498756:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1497933-1498049:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1497367-1497506:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1496454-1496586:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1496128-1496250:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1495573-1495737:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1494533-1494687:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1493326-1493533:-1:exon

GOLGA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GOLGA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 3 isoform X2
translation: MESSSMQQDVLLDNRSSSGAPGTSQEHGDYNAKSALCVTGDEVNTTSVNLSEVPNEEGSLELNSKAEACQNGPELLFPDSPISFDSTSSPQGQESSPGSVESSLPLENEEQIRLQARRRLEEQLRQYRVKRHQERSNQSTSKSRPSSTLDPELMLNPEILPRASTVAMTKEYSFLRTSVPRGPKLGSLGLPASSKERKSSKSSKSSKIRSLADYRTEDSGSGSSAGNLAATDLPGGTLKQSRSGPASVVSEISLPFDTDDRIEDSSLAGDSISEIDGSEVGMRLDGNESDSSTYSSVSGKGLYNNLPNSEGKQRIPYTINGQKIHPDAIGQFPSIGEVLQAAAVEHQAQEQEFNGEIRSRRDSISSSVSMESSVAGTHDEMLQVLKEKMRLEGQLEALSVEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQNQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTETQHRSIKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTVTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQEQLDEGTKRLGEDTEVTSEILEQLRQEMAIKSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLESEHSKLQKEVTEVRQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKRLDEKLSEQPLVSQEVEDLKWEVVQKEREIETLKQQLDMSEQRSHKELEGMQVVLQNIKTELEMVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKGENNSSNPVTPVKIPDCPVPAALLEELLKPSTAVSKEPLKNLNSCLRQLKQEMDSLQRQMEEHTITVHESMSSWTQIEEQLMDFTSTSPATASEQQERPALVEKKQNCDVSDKEALTL
SIO_010081: GOLGA3
subclass of: SO_0000673
so part of: GOLGA3
location: complement(join(1493326..1493533,1494533..1494687,1495573..1495737,1496128..1496250,1496454..1496586,1497367..1497506,1497933..1498049,1498559..1498756,1499329..1499472,1499886..1500102,1500876..1500970,1501472..1501735,1502614..1502691,1503862..1504230,1504677..1504838,1505439..1505576,1505952..1506154,1506740..1507046,1507580..1507691,1508808..1509502,1510618..1510730,1511686..1511844,1514977..1515109))
location: region:1493326-1515109:-1
so has part: feature:1514977-1515109:-1:exon
so has part: feature:1511686-1511844:-1:exon
so has part: feature:1510618-1510730:-1:exon
so has part: feature:1508808-1509502:-1:exon
so has part: feature:1507580-1507691:-1:exon
so has part: feature:1506740-1507046:-1:exon
so has part: feature:1505952-1506154:-1:exon
so has part: feature:1505439-1505576:-1:exon
so has part: feature:1504677-1504838:-1:exon
so has part: feature:1503862-1504230:-1:exon
so has part: feature:1502614-1502691:-1:exon
so has part: feature:1501472-1501735:-1:exon
so has part: feature:1500876-1500970:-1:exon
so has part: feature:1499886-1500102:-1:exon
so has part: feature:1499329-1499472:-1:exon
so has part: feature:1498559-1498756:-1:exon
so has part: feature:1497933-1498049:-1:exon
so has part: feature:1497367-1497506:-1:exon
so has part: feature:1496454-1496586:-1:exon
so has part: feature:1496128-1496250:-1:exon
so has part: feature:1495573-1495737:-1:exon
so has part: feature:1494533-1494687:-1:exon
so has part: feature:1493326-1493533:-1:exon

XP_010718299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1514977-1515109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511686-1511844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1510618-1510730:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1508808-1509502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1507580-1507691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1506740-1507046:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1505952-1506154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1505439-1505576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1504677-1504838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1503862-1504230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1502614-1502691:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1501472-1501735:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1500876-1500970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1499886-1500102:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1499329-1499472:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1498559-1498756:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1497933-1498049:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1497367-1497506:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1496454-1496586:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1496128-1496250:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1495573-1495737:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1494533-1494687:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1493326-1493533:-1:exon

GOLGA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GOLGA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 3 isoform X1
translation: MESSSMQQDVLLDNRSSSGAPGTSQEHGDYNAKSALCVTGDEVNTTSVNLSEVPNEEGSLELNSKAEACQNGPELLFPDSPISFDSTSSPQGQESSPGVPGFHDSLRKSQGTSAEGVALRKEALQSLKLSLPMQETELCSVESSLPLENEEQIRLQARRRLEEQLRQYRVKRHQERSNQSTSKSRPSSTLDPELMLNPEILPRASTVAMTKEYSFLRTSVPRGPKLGSLGLPASSKERKSSKSSKSSKIRSLADYRTEDSGSGSSAGNLAATDLPGGTLKQSRSGPASVVSEISLPFDTDDRIEDSSLAGDSISEIDGSEVGMRLDGNESDSSTYSSVSGKGLYNNLPNSEGKQRIPYTINGQKIHPDAIGQFPSIGEVLQAAAVEHQAQEQEFNGEIRSRRDSISSSVSMESSVAGTHDEMLQVLKEKMRLEGQLEALSVEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQNQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTETQHRSIKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTVTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQEQLDEGTKRLGEDTEVTSEILEQLRQEMAIKSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLESEHSKLQKEVTEVRQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKRLDEKLSEQPLVSQEVEDLKWEVVQKEREIETLKQQLDMSEQRSHKELEGMQVVLQNIKTELEMVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKGENNSSNPVTPVKIPDCPVPAALLEELLKPSTAVSKEPLKNLNSCLRQLKQEMDSLQRQMEEHTITVHESMSSWTQIEEQLMDFTSTSPATASEQQERPALVEKKQNCDVSDKEALTL
SIO_010081: GOLGA3
subclass of: SO_0000673
so part of: GOLGA3
location: complement(join(1493326..1493533,1494533..1494687,1495573..1495737,1496128..1496250,1496454..1496586,1497367..1497506,1497933..1498049,1498559..1498756,1499329..1499472,1499886..1500102,1500876..1500970,1501472..1501735,1502614..1502691,1503862..1504230,1504677..1504838,1505439..1505576,1505952..1506154,1506740..1507046,1507580..1507691,1508808..1509502,1510618..1510730,1511563..1511844,1514977..1515109))
location: region:1493326-1515109:-1
so has part: feature:1514977-1515109:-1:exon
so has part: feature:1511563-1511844:-1:exon
so has part: feature:1510618-1510730:-1:exon
so has part: feature:1508808-1509502:-1:exon
so has part: feature:1507580-1507691:-1:exon
so has part: feature:1506740-1507046:-1:exon
so has part: feature:1505952-1506154:-1:exon
so has part: feature:1505439-1505576:-1:exon
so has part: feature:1504677-1504838:-1:exon
so has part: feature:1503862-1504230:-1:exon
so has part: feature:1502614-1502691:-1:exon
so has part: feature:1501472-1501735:-1:exon
so has part: feature:1500876-1500970:-1:exon
so has part: feature:1499886-1500102:-1:exon
so has part: feature:1499329-1499472:-1:exon
so has part: feature:1498559-1498756:-1:exon
so has part: feature:1497933-1498049:-1:exon
so has part: feature:1497367-1497506:-1:exon
so has part: feature:1496454-1496586:-1:exon
so has part: feature:1496128-1496250:-1:exon
so has part: feature:1495573-1495737:-1:exon
so has part: feature:1494533-1494687:-1:exon
so has part: feature:1493326-1493533:-1:exon

XP_010718296.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1514977-1515109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511563-1511844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1510618-1510730:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1508808-1509502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1507580-1507691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1506740-1507046:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1505952-1506154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1505439-1505576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1504677-1504838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1503862-1504230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1502614-1502691:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1501472-1501735:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1500876-1500970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1499886-1500102:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1499329-1499472:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1498559-1498756:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1497933-1498049:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1497367-1497506:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1496454-1496586:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1496128-1496250:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1495573-1495737:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1494533-1494687:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1493326-1493533:-1:exon

GOLGA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GOLGA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 3 isoform X1
translation: MESSSMQQDVLLDNRSSSGAPGTSQEHGDYNAKSALCVTGDEVNTTSVNLSEVPNEEGSLELNSKAEACQNGPELLFPDSPISFDSTSSPQGQESSPGVPGFHDSLRKSQGTSAEGVALRKEALQSLKLSLPMQETELCSVESSLPLENEEQIRLQARRRLEEQLRQYRVKRHQERSNQSTSKSRPSSTLDPELMLNPEILPRASTVAMTKEYSFLRTSVPRGPKLGSLGLPASSKERKSSKSSKSSKIRSLADYRTEDSGSGSSAGNLAATDLPGGTLKQSRSGPASVVSEISLPFDTDDRIEDSSLAGDSISEIDGSEVGMRLDGNESDSSTYSSVSGKGLYNNLPNSEGKQRIPYTINGQKIHPDAIGQFPSIGEVLQAAAVEHQAQEQEFNGEIRSRRDSISSSVSMESSVAGTHDEMLQVLKEKMRLEGQLEALSVEANQALKEKAELQAQLAALNMKLQAQVEHSQSSQQKQESLSSEVATLKQSCWDLERAMADLQNTLEAKNASLASSNNDLQLAEEQYQRLMLKVEDMQKSVLTRDSTVHDLRQQLASLQNQLQKVQLERTTLTNKLKASETEITSLQNVRQWYQQQLVLAQEARVRLQSEMANIQAGQMTQAGVLEHLKLENVALSQQLTETQHRSIKEKERIAAQLQNIEADMLDQEAAFMQIQEAKTMVEEDLQRKLEEFEDEKEQLQKMADSAATLEQELDQVKLTLHQRDLQLESLQQEHLDLMKQFTVTQEMLHTKEQTLDDLQTQYDELKARLEEFQSDATSKDDMIQYLQNEKIVLEVALQTAKASQEQLDEGTKRLGEDTEVTSEILEQLRQEMAIKSSQVENLQQENGSLKKQVQKVKEQFLQQKVMVEAYRRDASSKDQLISELKATKKRLDSEMKELKRELLQIQVEKQSLESEHSKLQKEVTEVRQQMVEIENHLQSVQKERDEMETRLQSLQFDKEQMASLAEANQTLKLQVEQMQEEAKKAITEQKQKMKRLGSDLTSAQKEMKAKHKAYENAVSILSRRLQESLTAKESAEAELSKLKAQITDGGSNQIAQERIQALETELQAVRSSKLMLEKELQEVISLTSQELEEYREKVLELEDELQESRGFRRKIKRLEEINKKLALELEHERGKLTGLSQSNAALREHNNVLETALAKREADLVQLNLQVQAVLKRKEEEDQQMQQLIQALQASLEKEKSKVKDLKEQVAAAKADAAHNRRHYRAAALELNEVKKELHAKELLVQALQAEVDKLQVEDEKHSQEVSQFQQELAEARSQLQLLQKRLDEKLSEQPLVSQEVEDLKWEVVQKEREIETLKQQLDMSEQRSHKELEGMQVVLQNIKTELEMVREDLSVTQKDKFMLQAKVSELKNSMKSLLQQNQQLKMDLKHGKMKKRKGENNSSNPVTPVKIPDCPVPAALLEELLKPSTAVSKEPLKNLNSCLRQLKQEMDSLQRQMEEHTITVHESMSSWTQIEEQLMDFTSTSPATASEQQERPALVEKKQNCDVSDKEALTL
SIO_010081: GOLGA3
subclass of: SO_0000673
so part of: GOLGA3
location: complement(join(1493326..1493533,1494533..1494687,1495573..1495737,1496128..1496250,1496454..1496586,1497367..1497506,1497933..1498049,1498559..1498756,1499329..1499472,1499886..1500102,1500876..1500970,1501472..1501735,1502614..1502691,1503862..1504230,1504677..1504838,1505439..1505576,1505952..1506154,1506740..1507046,1507580..1507691,1508808..1509502,1510618..1510730,1511563..1511844,1514977..1515109))
location: region:1493326-1515109:-1
so has part: feature:1514977-1515109:-1:exon
so has part: feature:1511563-1511844:-1:exon
so has part: feature:1510618-1510730:-1:exon
so has part: feature:1508808-1509502:-1:exon
so has part: feature:1507580-1507691:-1:exon
so has part: feature:1506740-1507046:-1:exon
so has part: feature:1505952-1506154:-1:exon
so has part: feature:1505439-1505576:-1:exon
so has part: feature:1504677-1504838:-1:exon
so has part: feature:1503862-1504230:-1:exon
so has part: feature:1502614-1502691:-1:exon
so has part: feature:1501472-1501735:-1:exon
so has part: feature:1500876-1500970:-1:exon
so has part: feature:1499886-1500102:-1:exon
so has part: feature:1499329-1499472:-1:exon
so has part: feature:1498559-1498756:-1:exon
so has part: feature:1497933-1498049:-1:exon
so has part: feature:1497367-1497506:-1:exon
so has part: feature:1496454-1496586:-1:exon
so has part: feature:1496128-1496250:-1:exon
so has part: feature:1495573-1495737:-1:exon
so has part: feature:1494533-1494687:-1:exon
so has part: feature:1493326-1493533:-1:exon

XP_010718297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1514977-1515109:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511563-1511844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1510618-1510730:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1508808-1509502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1507580-1507691:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1506740-1507046:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1505952-1506154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1505439-1505576:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1504677-1504838:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1503862-1504230:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1502614-1502691:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1501472-1501735:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1500876-1500970:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1499886-1500102:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1499329-1499472:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1498559-1498756:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1497933-1498049:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1497367-1497506:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1496454-1496586:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1496128-1496250:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1495573-1495737:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1494533-1494687:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1493326-1493533:-1:exon

LOC104913525
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1538692..1553917
location: region:1538692-1553917:1
so has part: feature:1538692-1553917:1:exon
subclass of: SO_0000010

104913525
type: Gene
SIO_000068: ncbigene

position:1538692:1
position: 1538692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1553917:1
position: 1553917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538692-1553917:1:exon

LOC104913525
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913525
product: uncharacterized LOC104913525
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_010719998.3
SIO_010081: LOC104913525
subclass of: SO_0000673
so part of: LOC104913525
location: join(1538692..1540131,1545206..1545257,1545358..1545460,1546669..1546832,1550518..1550763,1551253..1553917)
location: region:1538692-1553917:1
so has part: feature:1538692-1540131:1:exon
so has part: feature:1545206-1545257:1:exon
so has part: feature:1545358-1545460:1:exon
so has part: feature:1546669-1546832:1:exon
so has part: feature:1550518-1550763:1:exon
so has part: feature:1551253-1553917:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1538692-1540131:1:exon

position:1540131:1
position: 1540131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1545206-1545257:1:exon

position:1545206:1
position: 1545206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545257:1
position: 1545257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1545358-1545460:1:exon

position:1545358:1
position: 1545358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545460:1
position: 1545460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1546669-1546832:1:exon

position:1546669:1
position: 1546669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546832:1
position: 1546832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1550518-1550763:1:exon

position:1550518:1
position: 1550518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1550763:1
position: 1550763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1551253-1553917:1:exon

position:1551253:1
position: 1551253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104913525
translation: MLSLARSKCICFISQVYYSCGAVVESMERGLILSPGFPNNYYPGTHCVWQFFIPVRMHLILEIFDFDIFESSSETPTPWDGFPAAAITRNKDVTPPEENLDFVLQTTKSSLQSWMSKAAQNLSGAGDQSKGLPGHLDELPGAASKKDEAKQMSEGNQSKQMKEPKAITETQTEEQPSSPDSGGAKTQRQNASSQETKEGWKGNILFAHLAASERDESLGESWTLPTTILPVEISSQQPAVDVCPHDVLYVSDLITFSSRFCGPNSPLNRTMVFGSSLEMVEVIMELITTTNRGRGFAMLFEYKNITEPNSVDAVRQERTENILMLAVLTGTVFFALALLSALCIACRQRTCPKRSSSNVCSDQENGIQNSAVDINELQLVVPSRENENNNHSVSREQAVTSCRGSTDQSPQDTDPDVPSSTSAVTTETGSDEVFIISAGPGASGLSFTTYRIQDKNLKRSVTSPASVSDWVTSGHMAAGADTVEKRNVQMENHHPRQRTWSARTFHDFLAPIPQLQKKWCSWTTNSPFTKLVDNSGFPTSARIQGVPSRKVISATEIEGASETVYSDSSVSNASYPLTLSAQRQRKLSSCNLKKSRFGNPYFGFFAGSPDNKRVRSLDSSRHLGAASPVNSQSPKSTLESSNPLKINLANASKTKDLGGEADKNKPVFVISEEGDDQQPLVLAEHLSQCGDHLSEPNAVYAVTVPDKQPVVLTVEGNSSASLTSNLPFWAKSPGLYKGQVKVPNSSKDKQSSSVVDTNTSETSQNFDTLAAPTLCQASVQ
SIO_010081: LOC104913525
subclass of: SO_0000673
so part of: LOC104913525
location: join(1539092..1540131,1545206..1545257,1545358..1545460,1546669..1546832,1550518..1550763,1551253..1551990)
location: region:1539092-1551990:1
so has part: feature:1539092-1540131:1:exon
so has part: feature:1545206-1545257:1:exon
so has part: feature:1545358-1545460:1:exon
so has part: feature:1546669-1546832:1:exon
so has part: feature:1550518-1550763:1:exon
so has part: feature:1551253-1551990:1:exon

XP_010718300.2
type: Protein
SIO_000068: ncbiprotein

position:1539092:1
position: 1539092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1551990:1
position: 1551990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1539092-1540131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1545206-1545257:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1545358-1545460:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1546669-1546832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1550518-1550763:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1551253-1551990:1:exon

CHFR
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CHFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1559189..1577576)
location: region:1559189-1577576:-1
so has part: feature:1559189-1577576:-1:exon
subclass of: SO_0000010

100547234
type: Gene
SIO_000068: ncbigene

position:1559189:-1
position: 1559189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577576:-1
position: 1577576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1559189-1577576:-1:exon

CHFR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CHFR
product: checkpoint with forkhead and ring finger domains
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_010719999.2
SIO_010081: CHFR
subclass of: SO_0000673
so part of: CHFR
location: complement(join(1559189..1559765,1561761..1561833,1562388..1562495,1562691..1562778,1563486..1563556,1564227..1564310,1564607..1564726,1565169..1565311,1566143..1566305,1566597..1566751,1567075..1567231,1567848..1568063,1568409..1568627,1568778..1568837,1570475..1570584,1576412..1576511,1577382..1577576))
location: region:1559189-1577576:-1
so has part: feature:1577382-1577576:-1:exon
so has part: feature:1576412-1576511:-1:exon
so has part: feature:1570475-1570584:-1:exon
so has part: feature:1568778-1568837:-1:exon
so has part: feature:1568409-1568627:-1:exon
so has part: feature:1567848-1568063:-1:exon
so has part: feature:1567075-1567231:-1:exon
so has part: feature:1566597-1566751:-1:exon
so has part: feature:1566143-1566305:-1:exon
so has part: feature:1565169-1565311:-1:exon
so has part: feature:1564607-1564726:-1:exon
so has part: feature:1564227-1564310:-1:exon
so has part: feature:1563486-1563556:-1:exon
so has part: feature:1562691-1562778:-1:exon
so has part: feature:1562388-1562495:-1:exon
so has part: feature:1561761-1561833:-1:exon
so has part: feature:1559189-1559765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1577382-1577576:-1:exon

position:1577382:-1
position: 1577382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1576412-1576511:-1:exon

position:1576412:-1
position: 1576412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1576511:-1
position: 1576511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1570475-1570584:-1:exon

position:1570475:-1
position: 1570475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1570584:-1
position: 1570584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1568778-1568837:-1:exon

position:1568778:-1
position: 1568778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568837:-1
position: 1568837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1568409-1568627:-1:exon

position:1568409:-1
position: 1568409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568627:-1
position: 1568627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1567848-1568063:-1:exon

position:1567848:-1
position: 1567848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568063:-1
position: 1568063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1567075-1567231:-1:exon

position:1567075:-1
position: 1567075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567231:-1
position: 1567231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1566597-1566751:-1:exon

position:1566597:-1
position: 1566597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566751:-1
position: 1566751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1566143-1566305:-1:exon

position:1566143:-1
position: 1566143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566305:-1
position: 1566305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1565169-1565311:-1:exon

position:1565169:-1
position: 1565169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565311:-1
position: 1565311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1564607-1564726:-1:exon

position:1564607:-1
position: 1564607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1564726:-1
position: 1564726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1564227-1564310:-1:exon

position:1564227:-1
position: 1564227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1564310:-1
position: 1564310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1563486-1563556:-1:exon

position:1563486:-1
position: 1563486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563556:-1
position: 1563556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1562691-1562778:-1:exon

position:1562691:-1
position: 1562691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1562778:-1
position: 1562778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1562388-1562495:-1:exon

position:1562388:-1
position: 1562388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1562495:-1
position: 1562495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1561761-1561833:-1:exon

position:1561761:-1
position: 1561761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1561833:-1
position: 1561833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1559189-1559765:-1:exon

position:1559765:-1
position: 1559765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHFR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CHFR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CHFR
translation: MERSEGGEQSGRRQQPWGRLTRLGAEEAEPHVLLLKREWTIGRKKGCDLSFPGNKLVSGDHCKIVVDEESGQVSLEDTSTNGTVINKLKVVKKQTYPLQTGDVIYVVYRKNEPENNVAYLYESLNAKHDATQEPVAVEANVENQCHVTKDTSSTGRSNDENQITSSPSATQSCYEEPQPSTSTSNLFNASSTSLIESASVEQDNPSTSGSQSSLFTPVPALPVLESVCLRALHDEREKLDVNAEISAITSEISDKENAELGSQRTEEEVVLEPAKKKLKGDEGACPNLPAAAPSECIIKIGSEDAKTSNVKPDKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSSLCPTCRCPVERICKNHILNNLVEAYLIQHPDKCRNEDDVRSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYIVCRQCPGYRRHSVPALPGTGQETEAGGVQALGDAPSTSANFPAAVQEYVCPAQGSHVICTCCFQPMPDRRAEREQNPHVAPQQCTVCLQPFCHLYWGCTRMACFGCLAPFCEINLGDKCLDGVLNNNHYESDILKDYLASRGLTWKNMLNESLLALQRGVFMLSDYRITGNTVLCYCCGLRSFRELAYQYRQNIPVAELPVTVTSRPDCYWGRNCRTQVKAHHAMKFNHICEQTRFKN
SIO_010081: CHFR
subclass of: SO_0000673
so part of: CHFR
location: complement(join(1559723..1559765,1561761..1561833,1562388..1562495,1562691..1562778,1563486..1563556,1564227..1564310,1564607..1564726,1565169..1565311,1566143..1566305,1566597..1566751,1567075..1567231,1567848..1568063,1568409..1568627,1568778..1568837,1570475..1570584,1576412..1576511,1577382..1577517))
location: region:1559723-1577517:-1
so has part: feature:1577382-1577517:-1:exon
so has part: feature:1576412-1576511:-1:exon
so has part: feature:1570475-1570584:-1:exon
so has part: feature:1568778-1568837:-1:exon
so has part: feature:1568409-1568627:-1:exon
so has part: feature:1567848-1568063:-1:exon
so has part: feature:1567075-1567231:-1:exon
so has part: feature:1566597-1566751:-1:exon
so has part: feature:1566143-1566305:-1:exon
so has part: feature:1565169-1565311:-1:exon
so has part: feature:1564607-1564726:-1:exon
so has part: feature:1564227-1564310:-1:exon
so has part: feature:1563486-1563556:-1:exon
so has part: feature:1562691-1562778:-1:exon
so has part: feature:1562388-1562495:-1:exon
so has part: feature:1561761-1561833:-1:exon
so has part: feature:1559723-1559765:-1:exon

XP_010718301.1
type: Protein
SIO_000068: ncbiprotein

position:1559723:-1
position: 1559723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577517:-1
position: 1577517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577382-1577517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1576412-1576511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1570475-1570584:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1568778-1568837:-1:exon

urn:…
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urn:…
SIO_000300: 6
SIO_000628: feature:1567848-1568063:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1567075-1567231:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1566597-1566751:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1566143-1566305:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1565169-1565311:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1564607-1564726:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1564227-1564310:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1563486-1563556:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1562691-1562778:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1562388-1562495:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1561761-1561833:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1559723-1559765:-1:exon

FBRSL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FBRSL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1604194..1912380)
location: region:1604194-1912380:-1
so has part: feature:1604194-1912380:-1:exon
subclass of: SO_0000010

100547388
type: Gene
SIO_000068: ncbigene

position:1604194:-1
position: 1604194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1912380:-1
position: 1912380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1604194-1912380:-1:exon

FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031555941.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615892..1615930,1616509..1616580,1619878..1619973,1620900..1620950,1623045..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1912161..1912380))
location: region:1604194-1912380:-1
so has part: feature:1912161-1912380:-1:exon
so has part: feature:1841979-1842014:-1:exon
so has part: feature:1751155-1751184:-1:exon
so has part: feature:1687972-1688025:-1:exon
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so has part: feature:1627480-1627733:-1:exon
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so has part: feature:1620900-1620950:-1:exon
so has part: feature:1619878-1619973:-1:exon
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so has part: feature:1615892-1615930:-1:exon
so has part: feature:1614980-1615051:-1:exon
so has part: feature:1613567-1613699:-1:exon
so has part: feature:1610378-1610455:-1:exon
so has part: feature:1608664-1608747:-1:exon
so has part: feature:1607401-1607635:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:1912161-1912380:-1:exon

position:1912161:-1
position: 1912161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1841979-1842014:-1:exon

position:1841979:-1
position: 1841979
reference: sequence
type: ReverseStrandPosition
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position:1842014:-1
position: 1842014
reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:1751155-1751184:-1:exon

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position: 1751155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751184:-1
position: 1751184
reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:1687972-1688025:-1:exon

position:1687972:-1
position: 1687972
reference: sequence
type: ReverseStrandPosition
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position:1688025:-1
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type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:1651651-1651696:-1:exon

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position: 1651651
reference: sequence
type: ReverseStrandPosition
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position:1651696:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:1629258-1629654:-1:exon

position:1629258:-1
position: 1629258
reference: sequence
type: ReverseStrandPosition
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position:1629654:-1
position: 1629654
reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:1627480-1627733:-1:exon

position:1627480:-1
position: 1627480
reference: sequence
type: ReverseStrandPosition
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position:1627733:-1
position: 1627733
reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:1623045-1623280:-1:exon

position:1623045:-1
position: 1623045
reference: sequence
type: ReverseStrandPosition
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position:1623280:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:1620900-1620950:-1:exon

position:1620900:-1
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reference: sequence
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position:1620950:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:1619878-1619973:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:1619973:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:1616509-1616580:-1:exon

position:1616509:-1
position: 1616509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1616580:-1
position: 1616580
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:1615892-1615930:-1:exon

position:1615892:-1
position: 1615892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615930:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:1614980-1615051:-1:exon

position:1614980:-1
position: 1614980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615051:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:1613567-1613699:-1:exon

position:1613567:-1
position: 1613567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1613699:-1
position: 1613699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1610378-1610455:-1:exon

position:1610378:-1
position: 1610378
reference: sequence
type: ReverseStrandPosition
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position:1610455:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:1608664-1608747:-1:exon

position:1608664:-1
position: 1608664
reference: sequence
type: ReverseStrandPosition
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position:1608747:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:1607401-1607635:-1:exon

position:1607401:-1
position: 1607401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607635:-1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:1604194-1605439:-1:exon

position:1605439:-1
position: 1605439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_031555939.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615892..1615930,1616509..1616580,1619878..1619973,1620900..1620950,1623045..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1751155..1751184,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
so has part: feature:1912161-1912380:-1:exon
so has part: feature:1850907-1851008:-1:exon
so has part: feature:1751155-1751184:-1:exon
so has part: feature:1651651-1651696:-1:exon
so has part: feature:1629258-1629654:-1:exon
so has part: feature:1627480-1627733:-1:exon
so has part: feature:1623045-1623280:-1:exon
so has part: feature:1620900-1620950:-1:exon
so has part: feature:1619878-1619973:-1:exon
so has part: feature:1616509-1616580:-1:exon
so has part: feature:1615892-1615930:-1:exon
so has part: feature:1614980-1615051:-1:exon
so has part: feature:1613567-1613699:-1:exon
so has part: feature:1610378-1610455:-1:exon
so has part: feature:1608664-1608747:-1:exon
so has part: feature:1607401-1607635:-1:exon
so has part: feature:1604194-1605439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1912161-1912380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1850907-1851008:-1:exon

position:1850907:-1
position: 1850907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1851008:-1
position: 1851008
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:1751155-1751184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1651651-1651696:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1629258-1629654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1627480-1627733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1623045-1623280:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1620900-1620950:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1619878-1619973:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1616509-1616580:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1615892-1615930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1614980-1615051:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1613567-1613699:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1610378-1610455:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1608664-1608747:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1607401-1607635:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1604194-1605439:-1:exon

FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_031555936.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615892..1615930,1616509..1616580,1619878..1619973,1620900..1620950,1623045..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
so has part: feature:1912161-1912380:-1:exon
so has part: feature:1850907-1851008:-1:exon
so has part: feature:1751155-1751184:-1:exon
so has part: feature:1687972-1688025:-1:exon
so has part: feature:1651651-1651696:-1:exon
so has part: feature:1629258-1629654:-1:exon
so has part: feature:1627480-1627733:-1:exon
so has part: feature:1623045-1623280:-1:exon
so has part: feature:1620900-1620950:-1:exon
so has part: feature:1619878-1619973:-1:exon
so has part: feature:1616509-1616580:-1:exon
so has part: feature:1615892-1615930:-1:exon
so has part: feature:1614980-1615051:-1:exon
so has part: feature:1613567-1613699:-1:exon
so has part: feature:1610378-1610455:-1:exon
so has part: feature:1608664-1608747:-1:exon
so has part: feature:1607401-1607635:-1:exon
so has part: feature:1604194-1605439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1912161-1912380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1850907-1851008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1751155-1751184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1687972-1688025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1651651-1651696:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1629258-1629654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1627480-1627733:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1623045-1623280:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1620900-1620950:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1619878-1619973:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1616509-1616580:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1615892-1615930:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1614980-1615051:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1613567-1613699:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1610378-1610455:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1608664-1608747:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1607401-1607635:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1604194-1605439:-1:exon

FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031555944.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615892..1615930,1616509..1616580,1619878..1619973,1620900..1620950,1623045..1623280,1627480..1627589,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
so has part: feature:1912161-1912380:-1:exon
so has part: feature:1850907-1851008:-1:exon
so has part: feature:1841979-1842014:-1:exon
so has part: feature:1751155-1751184:-1:exon
so has part: feature:1687972-1688025:-1:exon
so has part: feature:1651651-1651696:-1:exon
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so has part: feature:1616509-1616580:-1:exon
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so has part: feature:1613567-1613699:-1:exon
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so has part: feature:1608664-1608747:-1:exon
so has part: feature:1607401-1607635:-1:exon
so has part: feature:1604194-1605439:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1912161-1912380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1850907-1851008:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1841979-1842014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1751155-1751184:-1:exon

urn:…
SIO_000300: 5
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urn:…
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SIO_000628: feature:1651651-1651696:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1629258-1629654:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1627480-1627589:-1:exon

position:1627589:-1
position: 1627589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1623045-1623280:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1620900-1620950:-1:exon

urn:…
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SIO_000628: feature:1619878-1619973:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1616509-1616580:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1615892-1615930:-1:exon

urn:…
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SIO_000628: feature:1614980-1615051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1613567-1613699:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1610378-1610455:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1608664-1608747:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1607401-1607635:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1604194-1605439:-1:exon

FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_031555943.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615901..1615930,1616509..1616580,1620900..1620950,1623066..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
so has part: feature:1912161-1912380:-1:exon
so has part: feature:1850907-1851008:-1:exon
so has part: feature:1841979-1842014:-1:exon
so has part: feature:1751155-1751184:-1:exon
so has part: feature:1687972-1688025:-1:exon
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position:1623066:-1
position: 1623066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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position:1615901:-1
position: 1615901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
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urn:…
SIO_000300: 18
SIO_000628: feature:1604194-1605439:-1:exon

FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_031555942.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615892..1615930,1616509..1616580,1620900..1620950,1623066..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
so has part: feature:1912161-1912380:-1:exon
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urn:…
SIO_000300: 18
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FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_031555935.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615901..1615930,1616509..1616580,1619878..1619973,1620900..1620950,1623066..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
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urn:…
SIO_000300: 19
SIO_000628: feature:1604194-1605439:-1:exon

FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_031555934.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615892..1615930,1616509..1616580,1619878..1619973,1620900..1620950,1623066..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
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urn:…
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urn:…
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SIO_000628: feature:1604194-1605439:-1:exon

FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_031555940.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615892..1615930,1616509..1616580,1620900..1620950,1623045..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
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urn:…
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FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_031555933.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615901..1615930,1616509..1616580,1619878..1619973,1620900..1620950,1623045..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
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urn:…
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urn:…
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FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_031555938.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1610378..1610455,1613567..1613699,1614980..1615051,1615892..1615930,1616509..1616580,1619878..1619973,1620900..1620950,1623045..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
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FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_031555932.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615892..1615930,1616509..1616580,1619878..1619973,1620900..1620950,1623045..1623280,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
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SIO_000628: feature:1604194-1605439:-1:exon

FBRSL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBRSL1
product: fibrosin like 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_031555945.1
SIO_010081: FBRSL1
subclass of: SO_0000673
so part of: FBRSL1
location: complement(join(1604194..1605439,1607401..1607635,1608664..1608747,1610378..1610455,1613567..1613699,1614980..1615051,1615892..1615930,1616509..1616580,1620900..1620950,1623371..1623531,1627480..1627733,1629258..1629654,1651651..1651696,1687972..1688025,1751155..1751184,1841979..1842014,1850907..1851008,1912161..1912380))
location: region:1604194-1912380:-1
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