Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 16, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 16, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015026.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015026.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000977.2.\nOn Dec 18, 2014 this sequence version replaced NC_015026.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 14878991
topology: linear
so has quality: SO_0000987
location: 1..14878991
location: region:1-14878991:1
RO_0002162: 9103

NC_015026
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14878991:1
position: 14878991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-14878991:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 16
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 3772..3871
location: region:3772-3871:1
so has part: feature:3772-3871:1:region

position:3772:1
position: 3772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3871:1
position: 3871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3772-3871:1:region

LOC104913461
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 38129..41016
location: region:38129-41016:1
so has part: feature:38129-41016:1:exon
subclass of: SO_0000010

104913461
type: Gene
SIO_000068: ncbigene

position:38129:1
position: 38129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41016:1
position: 41016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38129-41016:1:exon

LOC104913461
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913461
product: zinc finger CCCH domain-containing protein 11A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019620649.2
SIO_010081: LOC104913461
subclass of: SO_0000673
so part of: LOC104913461
location: join(38129..38347,38671..38835,39039..39158,39277..39400,39745..39831,39920..40021,40338..41016)
location: region:38129-41016:1
so has part: feature:38129-38347:1:exon
so has part: feature:38671-38835:1:exon
so has part: feature:39039-39158:1:exon
so has part: feature:39277-39400:1:exon
so has part: feature:39745-39831:1:exon
so has part: feature:39920-40021:1:exon
so has part: feature:40338-41016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:38129-38347:1:exon

position:38347:1
position: 38347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:38671-38835:1:exon

position:38671:1
position: 38671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38835:1
position: 38835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:39039-39158:1:exon

position:39039:1
position: 39039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39158:1
position: 39158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39277-39400:1:exon

position:39277:1
position: 39277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39400:1
position: 39400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39745-39831:1:exon

position:39745:1
position: 39745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39831:1
position: 39831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:39920-40021:1:exon

position:39920:1
position: 39920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40021:1
position: 40021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:40338-41016:1:exon

position:40338:1
position: 40338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913461
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913461
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A-like
translation: MPQKGVDCYFYFYSICFKGDSCAFRHCEAALGSEQVCRQWMEGRCSSSDCKFRHMKIDKKRSEIPCYWENQPGGCQKAHCPFLHQKERGGNAPTVPPSNEADTSGLPLNSGLAESLGNQTEVEKAPERVDIPASSHGPAAQKRKRCDEKGKARELPCKKRVKGGRKVKMRAIDWKATFPKKQRQKRKAAEMQPSAAEDTDEPPARKLPMVRTAATAVVHKEGLHCSCSDGRNFKCSTALLFPLKAADVSQGTCGKLLF
SIO_010081: LOC104913461
subclass of: SO_0000673
so part of: LOC104913461
location: join(38782..38835,39039..39158,39277..39400,39745..39831,39920..40021,40338..40627)
location: region:38782-40627:1
so has part: feature:38782-38835:1:exon
so has part: feature:39039-39158:1:exon
so has part: feature:39277-39400:1:exon
so has part: feature:39745-39831:1:exon
so has part: feature:39920-40021:1:exon
so has part: feature:40338-40627:1:exon

XP_019476194.1
type: Protein
SIO_000068: ncbiprotein

position:38782:1
position: 38782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40627:1
position: 40627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38782-38835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:39039-39158:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:39277-39400:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39745-39831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39920-40021:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:40338-40627:1:exon

LOC104913340
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(48505..50755)
location: region:48505-50755:-1
so has part: feature:48505-50755:-1:exon
subclass of: SO_0000010

104913340
type: Gene
SIO_000068: ncbigene

position:48505:-1
position: 48505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50755:-1
position: 50755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48505-50755:-1:exon

LOC104913340
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913340
product: cyclin-F-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 185 samples with support for all annotated introns
transcript id: XM_010719298.3
SIO_010081: LOC104913340
subclass of: SO_0000673
so part of: LOC104913340
location: complement(join(48505..49217,49779..49930,50106..50236,50556..50755))
location: region:48505-50755:-1
so has part: feature:50556-50755:-1:exon
so has part: feature:50106-50236:-1:exon
so has part: feature:49779-49930:-1:exon
so has part: feature:48505-49217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:50556-50755:-1:exon

position:50556:-1
position: 50556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:50106-50236:-1:exon

position:50106:-1
position: 50106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50236:-1
position: 50236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:49779-49930:-1:exon

position:49779:-1
position: 49779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49930:-1
position: 49930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48505-49217:-1:exon

position:49217:-1
position: 49217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913340
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913340
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclin-F-like
translation: MSYSQLCSLLGVKQEDLKPSPLHTNVIEIKAFFSSPSGKRSKRRREDSTQDDRGSLVTTPTAELSTQEESLLDSFLDWSLDSCSGYEDEQESEVTSPSGILDPAEHCCQDSSDEDSLSVECPGHTAPLRKARTPDET
SIO_010081: LOC104913340
subclass of: SO_0000673
so part of: LOC104913340
location: complement(join(49084..49217,49779..49930,50106..50233))
location: region:49084-50233:-1
so has part: feature:50106-50233:-1:exon
so has part: feature:49779-49930:-1:exon
so has part: feature:49084-49217:-1:exon

XP_010717600.1
type: Protein
SIO_000068: ncbiprotein

position:49084:-1
position: 49084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:50233:-1
position: 50233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:50106-50233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49779-49930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:49084-49217:-1:exon

ABCA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ABCA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(51815..74299)
location: region:51815-74299:-1
so has part: feature:51815-74299:-1:exon
subclass of: SO_0000010

100549791
type: Gene
SIO_000068: ncbigene

position:51815:-1
position: 51815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74299:-1
position: 74299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:51815-74299:-1:exon

ABCA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ABCA3
product: ATP binding cassette subfamily A member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_010719299.2
SIO_010081: ABCA3
subclass of: SO_0000673
so part of: ABCA3
location: complement(join(51815..53809,54173..54246,54330..54517,54615..54785,54882..55069,55601..55795,55915..56049,56246..56418,56989..57147,57367..57586,57690..57894,58322..58595,58877..59180,60015..60207,60822..60920,61536..61686,62004..62214,62523..62678,62997..63151,63509..63638,64239..64385,65525..65706,66394..66567,67116..67236,67795..67911,68507..68766,69812..69977,70103..70230,72008..72272,74207..74299))
location: region:51815-74299:-1
so has part: feature:74207-74299:-1:exon
so has part: feature:72008-72272:-1:exon
so has part: feature:70103-70230:-1:exon
so has part: feature:69812-69977:-1:exon
so has part: feature:68507-68766:-1:exon
so has part: feature:67795-67911:-1:exon
so has part: feature:67116-67236:-1:exon
so has part: feature:66394-66567:-1:exon
so has part: feature:65525-65706:-1:exon
so has part: feature:64239-64385:-1:exon
so has part: feature:63509-63638:-1:exon
so has part: feature:62997-63151:-1:exon
so has part: feature:62523-62678:-1:exon
so has part: feature:62004-62214:-1:exon
so has part: feature:61536-61686:-1:exon
so has part: feature:60822-60920:-1:exon
so has part: feature:60015-60207:-1:exon
so has part: feature:58877-59180:-1:exon
so has part: feature:58322-58595:-1:exon
so has part: feature:57690-57894:-1:exon
so has part: feature:57367-57586:-1:exon
so has part: feature:56989-57147:-1:exon
so has part: feature:56246-56418:-1:exon
so has part: feature:55915-56049:-1:exon
so has part: feature:55601-55795:-1:exon
so has part: feature:54882-55069:-1:exon
so has part: feature:54615-54785:-1:exon
so has part: feature:54330-54517:-1:exon
so has part: feature:54173-54246:-1:exon
so has part: feature:51815-53809:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74207-74299:-1:exon

position:74207:-1
position: 74207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72008-72272:-1:exon

position:72008:-1
position: 72008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72272:-1
position: 72272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:70103-70230:-1:exon

position:70103:-1
position: 70103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70230:-1
position: 70230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:69812-69977:-1:exon

position:69812:-1
position: 69812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69977:-1
position: 69977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:68507-68766:-1:exon

position:68507:-1
position: 68507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68766:-1
position: 68766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:67795-67911:-1:exon

position:67795:-1
position: 67795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67911:-1
position: 67911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:67116-67236:-1:exon

position:67116:-1
position: 67116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67236:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:66394-66567:-1:exon

position:66394:-1
position: 66394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66567:-1
position: 66567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:65525-65706:-1:exon

position:65525:-1
position: 65525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:65706:-1
position: 65706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:64239-64385:-1:exon

position:64239:-1
position: 64239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64385:-1
position: 64385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:63509-63638:-1:exon

position:63509:-1
position: 63509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63638:-1
position: 63638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:62997-63151:-1:exon

position:62997:-1
position: 62997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63151:-1
position: 63151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:62523-62678:-1:exon

position:62523:-1
position: 62523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62678:-1
position: 62678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:62004-62214:-1:exon

position:62004:-1
position: 62004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62214:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:61536-61686:-1:exon

position:61536:-1
position: 61536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61686:-1
position: 61686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:60822-60920:-1:exon

position:60822:-1
position: 60822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60920:-1
position: 60920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:60015-60207:-1:exon

position:60015:-1
position: 60015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60207:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:58877-59180:-1:exon

position:58877:-1
position: 58877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:59180:-1
position: 59180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:58322-58595:-1:exon

position:58322:-1
position: 58322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:58595:-1
position: 58595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:57690-57894:-1:exon

position:57690:-1
position: 57690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57894:-1
position: 57894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:57367-57586:-1:exon

position:57367:-1
position: 57367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57586:-1
position: 57586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:56989-57147:-1:exon

position:56989:-1
position: 56989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:57147:-1
position: 57147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:56246-56418:-1:exon

position:56246:-1
position: 56246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56418:-1
position: 56418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:55915-56049:-1:exon

position:55915:-1
position: 55915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:56049:-1
position: 56049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:55601-55795:-1:exon

position:55601:-1
position: 55601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55795:-1
position: 55795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:54882-55069:-1:exon

position:54882:-1
position: 54882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55069:-1
position: 55069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:54615-54785:-1:exon

position:54615:-1
position: 54615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54785:-1
position: 54785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:54330-54517:-1:exon

position:54330:-1
position: 54330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54517:-1
position: 54517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:54173-54246:-1:exon

position:54173:-1
position: 54173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54246:-1
position: 54246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:51815-53809:-1:exon

position:53809:-1
position: 53809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ABCA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ABCA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-binding cassette sub-family A member 3
translation: MVVLRQFGLLLWKNYILQKRQILVTIIEICLPLLFAAILIALRHRVHSVSHPNATIYPSLSVDDLPGFFYRRHPGNPWELAYVPSNSSAVQSIARAVERALPISIRAQGFASEREFEDYVRRDNRSGSVLAAVIFKHHFSHGTDPLPLQVDYELRFKYSPRNAPRSEQTGLNPNLDRDWHTSYLFPLFQLPGPREAKFADGGTPGYIREGFLAVQHAVDRAIMQYHTNSSATSLLDNVTVVVQRFPYPSYVNDLFVLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMHMMGLSNWLHWSAWFLMFFLFLLVSVFFVTVLFCVKVSEQGAVLTSSDPTLVFTFLAIFSISSISFNFMVSTFFSRANIAAAAGGFLYFFSYIPYFFISPRYDLMSHSQKLASCLISNVAMAMGAQLIGMFEGKGTGIQWRDLMKPVSVDDNFTLAQVLGMLLLDSVLYGLVAWYVEAVFPGEYGVPQPWYFFLTPSYWCGQPRTVIGKEKEEEEDPEKALKSQYIEEEPADLVSGIKIKHLSKVFKVGNKTKEAVKDLTVNMYEGQITVLLGHNGAGKTTTLSMLTGLYSPTSGQAYINGYEISQDMVLIRRSLGLCPQHDVLFDNMTVEEHLHFYAGLKGYPASKCPEEINHILRILNLEDKRHSLTKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASRRATWDLLQQQRSNRTILLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKRKYGAGYHMVMVKEPYCNLGEISRLICQYVPNATMESNAGAELSFILPKESTHRFEALFTELELKREELGIASYGASVTTMEEVFLRVGKLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMTDMTDDSGALITEDCSSIKLNTGFYLCCQQFYAMFMKRAMYSWRNWKMVAAQFLVPLIFTAFALIVAKTFPGPRDSSMLRLTLEPYGQTIVPFSVPTASGLPQKLAEQYVELLDAQHQSPLEVPGGLEEYLISRASEEGGAFNEHYIAAASFEGVDNHTVVTALFNNQAYHSPATALMLADNAVFRVLMGPNASITVTNYPQPRNITEKAKDQLMEGQTGFAIAINLLYGMASLASTFALLLVSERAIKAKHVQFVSGVYVVNFWLSALLWDIINFLIPCALMLVIFQAFDVQAFTQDSHLVDVMLIFLLYGWAIIPLMYLLSFFFSVAATAYTRLTIFNILSGTATFLAVTIMSIPELGLVDLSRTLDKIFLTLPNYCLGQCISDFYQNYEFIQFCTSSVEAIFICKAFNISYQVNYFSWESPGIGRYLTSLTIQGFSFLFLLFLIETNLLWRLKTLVCGICRRRRWVALLNSVSVLPEDRDVADERKKVLESPPELLSSLSSPLVIKELTKVYDSRESLLAVDRISLAVSKGECFGLLGFNGAGKTTTFKMLTGDESITSGDAFVDGHSILANIKKVQQRIGYCPQFDALLEHMTGRETLSMYARLRGIPERYIGSCVENMLRGLLLEPHADKLVRTYSGGNKRKLSAGIALIGGPPVIFLDEPSTGMDPVARRLLWDAVTRTRECGKSIIFTSHSMEECEALCTRLAIMVNGQFKCLGSPQHLKSKFGSGYTLLAKTRTDEEGELQAFKAFVEKTFPGSVLKHEHQGMVHYHLTNKNLSWAQVFGALEKAKEKYRLEDYSVSQISLEQVFMSFTRFQHYTEDRGK
SIO_010081: ABCA3
subclass of: SO_0000673
so part of: ABCA3
location: complement(join(53678..53809,54173..54246,54330..54517,54615..54785,54882..55069,55601..55795,55915..56049,56246..56418,56989..57147,57367..57586,57690..57894,58322..58595,58877..59180,60015..60207,60822..60920,61536..61686,62004..62214,62523..62678,62997..63151,63509..63638,64239..64385,65525..65706,66394..66567,67116..67236,67795..67911,68507..68766,69812..69977,70103..70230,72008..72272,74207..74260))
location: region:53678-74260:-1
so has part: feature:74207-74260:-1:exon
so has part: feature:72008-72272:-1:exon
so has part: feature:70103-70230:-1:exon
so has part: feature:69812-69977:-1:exon
so has part: feature:68507-68766:-1:exon
so has part: feature:67795-67911:-1:exon
so has part: feature:67116-67236:-1:exon
so has part: feature:66394-66567:-1:exon
so has part: feature:65525-65706:-1:exon
so has part: feature:64239-64385:-1:exon
so has part: feature:63509-63638:-1:exon
so has part: feature:62997-63151:-1:exon
so has part: feature:62523-62678:-1:exon
so has part: feature:62004-62214:-1:exon
so has part: feature:61536-61686:-1:exon
so has part: feature:60822-60920:-1:exon
so has part: feature:60015-60207:-1:exon
so has part: feature:58877-59180:-1:exon
so has part: feature:58322-58595:-1:exon
so has part: feature:57690-57894:-1:exon
so has part: feature:57367-57586:-1:exon
so has part: feature:56989-57147:-1:exon
so has part: feature:56246-56418:-1:exon
so has part: feature:55915-56049:-1:exon
so has part: feature:55601-55795:-1:exon
so has part: feature:54882-55069:-1:exon
so has part: feature:54615-54785:-1:exon
so has part: feature:54330-54517:-1:exon
so has part: feature:54173-54246:-1:exon
so has part: feature:53678-53809:-1:exon

XP_010717601.1
type: Protein
SIO_000068: ncbiprotein

position:53678:-1
position: 53678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74260:-1
position: 74260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74207-74260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72008-72272:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:70103-70230:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69812-69977:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:68507-68766:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:67795-67911:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:67116-67236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:66394-66567:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:65525-65706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:64239-64385:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:63509-63638:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:62997-63151:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:62523-62678:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:62004-62214:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:61536-61686:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:60822-60920:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:60015-60207:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:58877-59180:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:58322-58595:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:57690-57894:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:57367-57586:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:56989-57147:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:56246-56418:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:55915-56049:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:55601-55795:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:54882-55069:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:54615-54785:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:54330-54517:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:54173-54246:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:53678-53809:-1:exon

MCRIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MCRIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <78529..79582
location: region:78529-79582:1
so has part: feature:78529-79582:1:exon
subclass of: SO_0000010

100549637
type: Gene
SIO_000068: ncbigene

position:78529:1
position: 78529
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:79582:1
position: 79582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78529-79582:1:exon

MCRIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MCRIP2
product: MAPK regulated corepressor interacting protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003210809.3
SIO_010081: MCRIP2
subclass of: SO_0000673
so part of: MCRIP2
location: join(<78529..78799,78880..78981,79448..79582)
location: region:78529-79582:1
so has part: feature:78529-78799:1:exon
so has part: feature:78880-78981:1:exon
so has part: feature:79448-79582:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78529-78799:1:exon

position:78799:1
position: 78799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:78880-78981:1:exon

position:78880:1
position: 78880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:78981:1
position: 78981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:79448-79582:1:exon

position:79448:1
position: 79448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCRIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MCRIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAPK regulated corepressor interacting protein 2
translation: WDIDGDTDGTVPGWWHRRAAWHTQDGGDALLLVCLQVALLPSTPAFPSPAQKLIFNRVNGKRPQVLLPHTSVPEESYTAAHEENVRFVYEAWQEVEQQLDGGQRGESARGPVQYVEKTPNPRLKNFVPIDLEDWWAQQFLAKIGNCS
SIO_010081: MCRIP2
subclass of: SO_0000673
so part of: MCRIP2
location: join(<78529..78799,78880..78981,79448..79518)
location: region:78529-79518:1
so has part: feature:78529-78799:1:exon
so has part: feature:78880-78981:1:exon
so has part: feature:79448-79518:1:exon

XP_003210857.2
type: Protein
SIO_000068: ncbiprotein

position:79518:1
position: 79518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78529-78799:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:78880-78981:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:79448-79518:1:exon

LOC104913462
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <79765..82488
location: region:79765-82488:1
so has part: feature:79765-82488:1:exon
subclass of: SO_0000010

104913462
type: Gene
SIO_000068: ncbigene

position:79765:1
position: 79765
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:82488:1
position: 82488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79765-82488:1:exon

LOC104913462
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913462
product: WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010719724.2
SIO_010081: LOC104913462
subclass of: SO_0000673
so part of: LOC104913462
location: <79765..82488
location: region:79765-82488:1
so has part: feature:79765-82488:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:79765-82488:1:exon

LOC104913462
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1-like
translation: PRPGSPQPFPSAECLKEPDRRRCEATEVRWHFDAKQGSCVTFRYGGCGANRNHFETYEECRAACVGSARPTCLLPMVQGPCQNWEPRWAYNYILKQCHSFVYGGCEGNNNNFDSKETCEDVCPFPKSLQCKACRLKSKMVLSLCRSDFAIVGRLMEIVEDQDSGIARFALEDVLKDEKMGLKFFNIKYLEVTLIDMDWSCPCPNMTAEDGPLIIMGAVHDGMATLDPGSYVRAANDKRVKKIYELMEKKTCDLLNRFQD
SIO_010081: LOC104913462
subclass of: SO_0000673
so part of: LOC104913462
location: <79765..80544
location: region:79765-80544:1
so has part: feature:79765-80544:1:exon

XP_010718026.1
type: Protein
SIO_000068: ncbiprotein

position:80544:1
position: 80544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:79765-80544:1:exon

LOC104913463
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 82604..85912
location: region:82604-85912:1
so has part: feature:82604-85912:1:exon
subclass of: SO_0000010

104913463
type: Gene
SIO_000068: ncbigene

position:82604:1
position: 82604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85912:1
position: 85912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82604-85912:1:exon

LOC104913463
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913463
product: WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010719725.2
SIO_010081: LOC104913463
subclass of: SO_0000673
so part of: LOC104913463
location: join(82604..83472,84219..84934,85906..85912)
location: region:82604-85912:1
so has part: feature:82604-83472:1:exon
so has part: feature:84219-84934:1:exon
so has part: feature:85906-85912:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82604-83472:1:exon

position:83472:1
position: 83472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:84219-84934:1:exon

position:84219:1
position: 84219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84934:1
position: 84934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:85906-85912:1:exon

position:85906:1
position: 85906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913463
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913463
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1-like
translation: MPRRSFDRSGPRSRPGGQQLAGAEPMRSALLLLLPLLAAAAGLSLQQARMRHLGVCPNQLNPNLWVDAQSTCERECQADQDCEGFEKCCTNVCGLRSCVAARFADGSLLALELGRGPSCESFVCAQQGSDCDIWDGQPVCKCKDRCEKEPNFTCASDGLTYYNKCYMDAEACLRGTRLTTVPCKHIFTWPDTSPVPRETTARPTPGAGPEPLVPPALYSNPFHQSVRAGGTVSFRCDVSGRPRPDITWEKQSERAENFIMRPDQMYGNVVVTNIGQLVIYNARHEDAGIYTCTARNAAGLLRADFPLSVLKREPGAVPRC
SIO_010081: LOC104913463
subclass of: SO_0000673
so part of: LOC104913463
location: join(83233..83472,84219..84934,85906..85912)
location: region:83233-85912:1
so has part: feature:83233-83472:1:exon
so has part: feature:84219-84934:1:exon
so has part: feature:85906-85912:1:exon

XP_010718027.1
type: Protein
SIO_000068: ncbiprotein

position:83233:1
position: 83233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83233-83472:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:84219-84934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:85906-85912:1:exon

RAB40C
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RAB40C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 96946..107240
location: region:96946-107240:1
so has part: feature:96946-107240:1:exon
subclass of: SO_0000010

100549483
type: Gene
SIO_000068: ncbigene

position:96946:1
position: 96946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:107240:1
position: 107240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96946-107240:1:exon

RAB40C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RAB40C
product: RAB40C, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019620592.1
SIO_010081: RAB40C
subclass of: SO_0000673
so part of: RAB40C
location: join(96946..96959,97182..97412,98352..98412,104495..104572,104960..105182,106679..107240)
location: region:96946-107240:1
so has part: feature:96946-96959:1:exon
so has part: feature:97182-97412:1:exon
so has part: feature:98352-98412:1:exon
so has part: feature:104495-104572:1:exon
so has part: feature:104960-105182:1:exon
so has part: feature:106679-107240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96946-96959:1:exon

position:96959:1
position: 96959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:97182-97412:1:exon

position:97182:1
position: 97182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97412:1
position: 97412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:98352-98412:1:exon

position:98352:1
position: 98352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98412:1
position: 98412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:104495-104572:1:exon

position:104495:1
position: 104495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104572:1
position: 104572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:104960-105182:1:exon

position:104960:1
position: 104960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105182:1
position: 105182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:106679-107240:1:exon

position:106679:1
position: 106679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB40C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RAB40C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-40C
translation: MAVPCKQFNLHVLISKHSRFTSLVVLYSFCPCSRKAAAVFSGQASQHHHLPACLTPVLFSLGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSRIVLMRHGMEKIWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVTIKSHLKSFSMANGMNAVMMHGRSYSLASSGGGSSSKGNSLKRSKSIRPPQSPPQNCSRNNCKIS
SIO_010081: RAB40C
subclass of: SO_0000673
so part of: RAB40C
location: join(96946..96959,97182..97412,98352..98412,104495..104572,104960..105182,106679..106959)
location: region:96946-106959:1
so has part: feature:96946-96959:1:exon
so has part: feature:97182-97412:1:exon
so has part: feature:98352-98412:1:exon
so has part: feature:104495-104572:1:exon
so has part: feature:104960-105182:1:exon
so has part: feature:106679-106959:1:exon

XP_019476137.1
type: Protein
SIO_000068: ncbiprotein

position:106959:1
position: 106959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96946-96959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:97182-97412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:98352-98412:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:104495-104572:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:104960-105182:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:106679-106959:1:exon

LOC109370193
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370193
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 112620..117557
location: region:112620-117557:1
so has part: feature:112620-117557:1:exon
subclass of: SO_0000011

109370193
type: Gene
SIO_000068: ncbigene

position:112620:1
position: 112620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117557:1
position: 117557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:112620-117557:1:exon

LOC109370193
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370193
product: uncharacterized LOC109370193
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XR_002120091.2
SIO_010081: LOC109370193
subclass of: SO_0000673
so part of: LOC109370193
location: join(112620..112807,116929..117557)
location: region:112620-117557:1
so has part: feature:112620-112807:1:exon
so has part: feature:116929-117557:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:112620-112807:1:exon

position:112807:1
position: 112807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:116929-117557:1:exon

position:116929:1
position: 116929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIGQ
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PIGQ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 121748..144477
location: region:121748-144477:1
so has part: feature:121748-144477:1:exon
subclass of: SO_0000010

100549329
type: Gene
SIO_000068: ncbigene

position:121748:1
position: 121748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144477:1
position: 144477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121748-144477:1:exon

PIGQ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PIGQ
product: phosphatidylinositol glycan anchor biosynthesis class Q, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031555799.1
SIO_010081: PIGQ
subclass of: SO_0000673
so part of: PIGQ
location: join(121748..122125,123657..124339,128817..128948,130125..130245,135833..135959,136915..137068,139977..140088,141756..141836,142803..142917,144303..144477)
location: region:121748-144477:1
so has part: feature:121748-122125:1:exon
so has part: feature:123657-124339:1:exon
so has part: feature:128817-128948:1:exon
so has part: feature:130125-130245:1:exon
so has part: feature:135833-135959:1:exon
so has part: feature:136915-137068:1:exon
so has part: feature:139977-140088:1:exon
so has part: feature:141756-141836:1:exon
so has part: feature:142803-142917:1:exon
so has part: feature:144303-144477:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:121748-122125:1:exon

position:122125:1
position: 122125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:123657-124339:1:exon

position:123657:1
position: 123657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:124339:1
position: 124339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:128817-128948:1:exon

position:128817:1
position: 128817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:128948:1
position: 128948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:130125-130245:1:exon

position:130125:1
position: 130125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130245:1
position: 130245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135833-135959:1:exon

position:135833:1
position: 135833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135959:1
position: 135959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:136915-137068:1:exon

position:136915:1
position: 136915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137068:1
position: 137068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:139977-140088:1:exon

position:139977:1
position: 139977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140088:1
position: 140088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:141756-141836:1:exon

position:141756:1
position: 141756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141836:1
position: 141836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:142803-142917:1:exon

position:142803:1
position: 142803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142917:1
position: 142917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:144303-144477:1:exon

position:144303:1
position: 144303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIGQ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PIGQ
product: phosphatidylinositol glycan anchor biosynthesis class Q, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019620653.2
SIO_010081: PIGQ
subclass of: SO_0000673
so part of: PIGQ
location: join(121749..122125,123491..123560,123657..124339,128817..128948,130125..130245,135833..135959,136915..137068,139977..140088,141756..141836,142803..142917,144303..144477)
location: region:121749-144477:1
so has part: feature:121749-122125:1:exon
so has part: feature:123491-123560:1:exon
so has part: feature:123657-124339:1:exon
so has part: feature:128817-128948:1:exon
so has part: feature:130125-130245:1:exon
so has part: feature:135833-135959:1:exon
so has part: feature:136915-137068:1:exon
so has part: feature:139977-140088:1:exon
so has part: feature:141756-141836:1:exon
so has part: feature:142803-142917:1:exon
so has part: feature:144303-144477:1:exon

position:121749:1
position: 121749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121749-122125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123491-123560:1:exon

position:123491:1
position: 123491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123560:1
position: 123560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:123657-124339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128817-128948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130125-130245:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135833-135959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136915-137068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:139977-140088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:141756-141836:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:142803-142917:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:144303-144477:1:exon

PIGQ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PIGQ
product: phosphatidylinositol glycan anchor biosynthesis class Q, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019620654.2
SIO_010081: PIGQ
subclass of: SO_0000673
so part of: PIGQ
location: join(121749..122125,123491..123560,123657..124339,128817..128948,130125..130245,135833..135959,136915..137068,139977..140088,140492..141749)
location: region:121749-141749:1
so has part: feature:121749-122125:1:exon
so has part: feature:123491-123560:1:exon
so has part: feature:123657-124339:1:exon
so has part: feature:128817-128948:1:exon
so has part: feature:130125-130245:1:exon
so has part: feature:135833-135959:1:exon
so has part: feature:136915-137068:1:exon
so has part: feature:139977-140088:1:exon
so has part: feature:140492-141749:1:exon

position:141749:1
position: 141749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121749-122125:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:123491-123560:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123657-124339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:128817-128948:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:130125-130245:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:135833-135959:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:136915-137068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:139977-140088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:140492-141749:1:exon

position:140492:1
position: 140492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PIGQ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PIGQ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X1
translation: MVLKVFFPSCCSSAESGILIGRWIPEQSSAVILAVVHFPFIPLQVKQYLREVQQVTKVSISVLGSWNNSKQEKEESLSEFLEDLGTIFSHEPWIQISKEGDSKFWNCSTLQKQSDTHREEEIILVYYDQRKVMLSHLHPPLDTADLGAEDASKLSAIFNTVASSKVLFMTDRYDDGPIKMTHWQSDGVEASIIVELMKQASVPACMLLTFLLSLVSGVCNSRVLKFWPLSFLWSKLSTCEQLGHRLQHLQVISSSKKAQNQTQLMRKANIFVSLLIDVALGILLMSWLYRKNQIGHLADTLIPVADHVAEELQDLLQWLMGAPAGLKMNRALDQVLGRFFLYHIHLWISYIHLMSPFIEMILWYVGLSACLGLTVALCILSDIIALLTFHIYCFYVYGARLYCLKIYGLSSLWRLFRGKKWNVLRQRVDSCSYDLDQLFIGTLLFTILLFLLPTTALYYLVFTLLRLLVVIVQGLIHLLVDLIDSLPLYSVILRFCRSYRLADSEIFLRVLCMASDYFEHHQDTSTNVNG
SIO_010081: PIGQ
subclass of: SO_0000673
so part of: PIGQ
location: join(123675..124339,128817..128948,130125..130245,135833..135959,136915..137068,139977..140088,141756..141836,142803..142917,144303..144388)
location: region:123675-144388:1
so has part: feature:123675-124339:1:exon
so has part: feature:128817-128948:1:exon
so has part: feature:130125-130245:1:exon
so has part: feature:135833-135959:1:exon
so has part: feature:136915-137068:1:exon
so has part: feature:139977-140088:1:exon
so has part: feature:141756-141836:1:exon
so has part: feature:142803-142917:1:exon
so has part: feature:144303-144388:1:exon

XP_019476198.1
type: Protein
SIO_000068: ncbiprotein

position:123675:1
position: 123675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144388:1
position: 144388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123675-124339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128817-128948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130125-130245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135833-135959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136915-137068:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139977-140088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141756-141836:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142803-142917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:144303-144388:1:exon

PIGQ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PIGQ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X1
translation: MVLKVFFPSCCSSAESGILIGRWIPEQSSAVILAVVHFPFIPLQVKQYLREVQQVTKVSISVLGSWNNSKQEKEESLSEFLEDLGTIFSHEPWIQISKEGDSKFWNCSTLQKQSDTHREEEIILVYYDQRKVMLSHLHPPLDTADLGAEDASKLSAIFNTVASSKVLFMTDRYDDGPIKMTHWQSDGVEASIIVELMKQASVPACMLLTFLLSLVSGVCNSRVLKFWPLSFLWSKLSTCEQLGHRLQHLQVISSSKKAQNQTQLMRKANIFVSLLIDVALGILLMSWLYRKNQIGHLADTLIPVADHVAEELQDLLQWLMGAPAGLKMNRALDQVLGRFFLYHIHLWISYIHLMSPFIEMILWYVGLSACLGLTVALCILSDIIALLTFHIYCFYVYGARLYCLKIYGLSSLWRLFRGKKWNVLRQRVDSCSYDLDQLFIGTLLFTILLFLLPTTALYYLVFTLLRLLVVIVQGLIHLLVDLIDSLPLYSVILRFCRSYRLADSEIFLRVLCMASDYFEHHQDTSTNVNG
SIO_010081: PIGQ
subclass of: SO_0000673
so part of: PIGQ
location: join(123675..124339,128817..128948,130125..130245,135833..135959,136915..137068,139977..140088,141756..141836,142803..142917,144303..144388)
location: region:123675-144388:1
so has part: feature:123675-124339:1:exon
so has part: feature:128817-128948:1:exon
so has part: feature:130125-130245:1:exon
so has part: feature:135833-135959:1:exon
so has part: feature:136915-137068:1:exon
so has part: feature:139977-140088:1:exon
so has part: feature:141756-141836:1:exon
so has part: feature:142803-142917:1:exon
so has part: feature:144303-144388:1:exon

XP_031411659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:123675-124339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128817-128948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130125-130245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135833-135959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136915-137068:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139977-140088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:141756-141836:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:142803-142917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:144303-144388:1:exon

PIGQ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PIGQ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol N-acetylglucosaminyltransferase subunit Q isoform X2
translation: MVLKVFFPSCCSSAESGILIGRWIPEQSSAVILAVVHFPFIPLQVKQYLREVQQVTKVSISVLGSWNNSKQEKEESLSEFLEDLGTIFSHEPWIQISKEGDSKFWNCSTLQKQSDTHREEEIILVYYDQRKVMLSHLHPPLDTADLGAEDASKLSAIFNTVASSKVLFMTDRYDDGPIKMTHWQSDGVEASIIVELMKQASVPACMLLTFLLSLVSGVCNSRVLKFWPLSFLWSKLSTCEQLGHRLQHLQVISSSKKAQNQTQLMRKANIFVSLLIDVALGILLMSWLYRKNQIGHLADTLIPVADHVAEELQDLLQWLMGAPAGLKMNRALDQVLGRFFLYHIHLWISYIHLMSPFIEMILWYVGLSACLGLTVALCILSDIIALLTFHIYCFYVYGARLYCLKIYGLSSLWRLFRGKKWNVLRQRVDSCSYDLDQML
SIO_010081: PIGQ
subclass of: SO_0000673
so part of: PIGQ
location: join(123675..124339,128817..128948,130125..130245,135833..135959,136915..137068,139977..140088,140492..140500)
location: region:123675-140500:1
so has part: feature:123675-124339:1:exon
so has part: feature:128817-128948:1:exon
so has part: feature:130125-130245:1:exon
so has part: feature:135833-135959:1:exon
so has part: feature:136915-137068:1:exon
so has part: feature:139977-140088:1:exon
so has part: feature:140492-140500:1:exon

XP_019476199.1
type: Protein
SIO_000068: ncbiprotein

position:140500:1
position: 140500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123675-124339:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:128817-128948:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:130125-130245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135833-135959:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136915-137068:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:139977-140088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:140492-140500:1:exon

NHLRC4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NHLRC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 172538..177046
location: region:172538-177046:1
so has part: feature:172538-177046:1:exon
subclass of: SO_0000010

104913343
type: Gene
SIO_000068: ncbigene

position:172538:1
position: 172538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177046:1
position: 177046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172538-177046:1:exon

NHLRC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NHLRC4
product: NHL repeat containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019620655.1
SIO_010081: NHLRC4
subclass of: SO_0000673
so part of: NHLRC4
location: join(172538..173342,174210..177046)
location: region:172538-177046:1
so has part: feature:172538-173342:1:exon
so has part: feature:174210-177046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172538-173342:1:exon

position:173342:1
position: 173342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174210-177046:1:exon

position:174210:1
position: 174210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NHLRC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NHLRC4
product: NHL repeat containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010719304.2
SIO_010081: NHLRC4
subclass of: SO_0000673
so part of: NHLRC4
location: join(172538..173342,174767..177046)
location: region:172538-177046:1
so has part: feature:172538-173342:1:exon
so has part: feature:174767-177046:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172538-173342:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:174767-177046:1:exon

position:174767:1
position: 174767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NHLRC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NHLRC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NHL-repeat-containing protein 4
translation: MDSTLETSQQKEKLLKALYTLQLKSNTTLQTASPLLSSQQGMGMVTQLQVHQLADKTKSLCRDLDNIKNLLHYRQDELVRQIPNPTGSRYGCVSGIHCSRDGSIYVTAEGAPWVHVLSSTGQMLKSLPCWQTGREGGSFLPEDVTVTRAGMVAVADMTNGAVWVFNPHTTPSKGEWIKIGKVGSPRGVGVDSMGNILVADYAQGQVCSFALDHAFRTLNIRSVPNLQGPRYVSPAPNGGFVVSEECGDVKVFMSSHKLVCSLSSKYGHQFGNPAGVCVDAEGSVVVADEQHRAVHLFPESGAPICLVSAGLRRPAGVACSPFGHLFVADTGENCVKVFKYHVRPRQPLGTL
SIO_010081: NHLRC4
subclass of: SO_0000673
so part of: NHLRC4
location: 174783..175838
location: region:174783-175838:1
so has part: feature:174783-175838:1:exon

XP_019476200.1
type: Protein
SIO_000068: ncbiprotein

position:174783:1
position: 174783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175838:1
position: 175838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174783-175838:1:exon

NHLRC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NHLRC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NHL-repeat-containing protein 4
translation: MDSTLETSQQKEKLLKALYTLQLKSNTTLQTASPLLSSQQGMGMVTQLQVHQLADKTKSLCRDLDNIKNLLHYRQDELVRQIPNPTGSRYGCVSGIHCSRDGSIYVTAEGAPWVHVLSSTGQMLKSLPCWQTGREGGSFLPEDVTVTRAGMVAVADMTNGAVWVFNPHTTPSKGEWIKIGKVGSPRGVGVDSMGNILVADYAQGQVCSFALDHAFRTLNIRSVPNLQGPRYVSPAPNGGFVVSEECGDVKVFMSSHKLVCSLSSKYGHQFGNPAGVCVDAEGSVVVADEQHRAVHLFPESGAPICLVSAGLRRPAGVACSPFGHLFVADTGENCVKVFKYHVRPRQPLGTL
SIO_010081: NHLRC4
subclass of: SO_0000673
so part of: NHLRC4
location: 174783..175838
location: region:174783-175838:1
so has part: feature:174783-175838:1:exon

XP_010717606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:174783-175838:1:exon

CAPN15
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CAPN15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 192558..227629
location: region:192558-227629:1
so has part: feature:192558-227629:1:exon
subclass of: SO_0000010

100548870
type: Gene
SIO_000068: ncbigene

position:192558:1
position: 192558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227629:1
position: 227629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192558-227629:1:exon

CAPN15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAPN15
product: calpain 15, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 167 samples with support for all annotated introns
transcript id: XM_010719305.3
SIO_010081: CAPN15
subclass of: SO_0000673
so part of: CAPN15
location: join(192558..192728,214719..216216,219074..219282,219478..219661,222105..222328,223195..223320,223434..223586,223952..224113,224948..225177,225370..225530,225779..225957,226107..227629)
location: region:192558-227629:1
so has part: feature:192558-192728:1:exon
so has part: feature:214719-216216:1:exon
so has part: feature:219074-219282:1:exon
so has part: feature:219478-219661:1:exon
so has part: feature:222105-222328:1:exon
so has part: feature:223195-223320:1:exon
so has part: feature:223434-223586:1:exon
so has part: feature:223952-224113:1:exon
so has part: feature:224948-225177:1:exon
so has part: feature:225370-225530:1:exon
so has part: feature:225779-225957:1:exon
so has part: feature:226107-227629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:192558-192728:1:exon

position:192728:1
position: 192728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214719-216216:1:exon

position:214719:1
position: 214719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216216:1
position: 216216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:219074-219282:1:exon

position:219074:1
position: 219074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219282:1
position: 219282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:219478-219661:1:exon

position:219478:1
position: 219478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219661:1
position: 219661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:222105-222328:1:exon

position:222105:1
position: 222105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:222328:1
position: 222328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:223195-223320:1:exon

position:223195:1
position: 223195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223320:1
position: 223320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:223434-223586:1:exon

position:223434:1
position: 223434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223586:1
position: 223586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:223952-224113:1:exon

position:223952:1
position: 223952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224113:1
position: 224113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:224948-225177:1:exon

position:224948:1
position: 224948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225177:1
position: 225177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:225370-225530:1:exon

position:225370:1
position: 225370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225530:1
position: 225530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:225779-225957:1:exon

position:225779:1
position: 225779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:225957:1
position: 225957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:226107-227629:1:exon

position:226107:1
position: 226107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CAPN15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CAPN15
product: calpain 15, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 71 samples with support for all annotated introns
transcript id: XM_010719306.3
SIO_010081: CAPN15
subclass of: SO_0000673
so part of: CAPN15
location: join(213356..214113,214719..216216,219074..219282,219478..219661,222105..222328,223195..223320,223434..223586,223952..224113,224948..225177,225370..225530,225779..225957,226107..226284)
location: region:213356-226284:1
so has part: feature:213356-214113:1:exon
so has part: feature:214719-216216:1:exon
so has part: feature:219074-219282:1:exon
so has part: feature:219478-219661:1:exon
so has part: feature:222105-222328:1:exon
so has part: feature:223195-223320:1:exon
so has part: feature:223434-223586:1:exon
so has part: feature:223952-224113:1:exon
so has part: feature:224948-225177:1:exon
so has part: feature:225370-225530:1:exon
so has part: feature:225779-225957:1:exon
so has part: feature:226107-226284:1:exon

position:213356:1
position: 213356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226284:1
position: 226284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:213356-214113:1:exon

position:214113:1
position: 214113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:214719-216216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219074-219282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:219478-219661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:222105-222328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223195-223320:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223434-223586:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:223952-224113:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:224948-225177:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225370-225530:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225779-225957:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:226107-226284:1:exon

CAPN15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAPN15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-15
translation: MAAVHEWSCTRCTFLNPVGQRQCSICEAPRQKPDLNHILRLSVEEQKWACARCTFKNFLGKETCEVCGFTPEPGPSGSPLPVINGILPKPAVLVEPKGTAKEEAAKAESSSEDSEGKSPDEAELESGWACQRCTLHNTPVANSCSACGGPRKLSLPKIPPEALVVPEVITPAGFHMAPSTPQSLVPTEISDGDAAAAQGPVAMEQEAQKMPAFSPFSPGLQNNPVPRSRREVPPQLQMPGPEAPQPGAQGTAGQKGSPQGQARAAPAARLQELLSNKRLSVLEEEMDVSPSHWKCSTCSLLNSAGTGKCEACSTQKGSDTINLVGDSVRFTPCSPSSPDFTTWSCSKCTLKNPTAAQKCKVCGSSKLHGFQEHSPQGEPSPRCPECGAGEKGSCSSCGTKAPSARKVARLFPSQLPGTQDRPGQWACPACTLLNELKAKHCVACHTPQQYVAQRKGLKPLKRRESMHVEKRRQTDEGEAKALWENIVTFCRENKVNFVDDSFHPGPKSVGFPEGDSVQQRVKQWLRPHEINCNIFKDRSVKWSVFRTPRPSDILQGLLGNCWFLSALAVLAERPELVERVMITRTLCPEGAYQVRLCKDGTWTTVLVDDMLPCDECGYLLFSQAQRKQLWVALIEKALAKLHGSYFALQAGRAIEGLATLTGAPCESLMLQVSSTNPREEPIDTDLIWAKMLSSKEAGFLMGASCGGGNMKVDDVAYESMGLRPRHAYSILDVRDVQGFRLLRLRNPWGRFSWNGSWSDEWPHWPAPLRHDLMPHGSSEGVFWMEYSDFIKYFDSVDICKLHSDWHEVRVQGMFPNKANGPVTVTSLTVLERAALEFALFQEGSRRSDAVDSHLLDLCIMVFRATFTSGNKLSLGRLMAHSKRAVKKFVSCDVMLEPGEYAVVCCAFNHWSAALAGPTAAQASSPTSSRPATDYSSYILAIYSSRLVMVEQVEAQPTTLADAIILLTENKGERHEGREGMTCYYLTHGWAGLIVVVENRHPKSYLHVQCDCTDSFNVVSTRGSLKTQDSVPPLHRQVLVILSQLEGNAGFSITHRLAHRKATQAFLNDWMSTKGTHNPLLTPEVAGLHGPRPL
SIO_010081: CAPN15
subclass of: SO_0000673
so part of: CAPN15
location: join(214741..216216,219074..219282,219478..219661,222105..222328,223195..223320,223434..223586,223952..224113,224948..225177,225370..225530,225779..225957,226107..226284)
location: region:214741-226284:1
so has part: feature:214741-216216:1:exon
so has part: feature:219074-219282:1:exon
so has part: feature:219478-219661:1:exon
so has part: feature:222105-222328:1:exon
so has part: feature:223195-223320:1:exon
so has part: feature:223434-223586:1:exon
so has part: feature:223952-224113:1:exon
so has part: feature:224948-225177:1:exon
so has part: feature:225370-225530:1:exon
so has part: feature:225779-225957:1:exon
so has part: feature:226107-226284:1:exon

XP_010717607.2
type: Protein
SIO_000068: ncbiprotein

position:214741:1
position: 214741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:214741-216216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219074-219282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219478-219661:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222105-222328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223195-223320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223434-223586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223952-224113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224948-225177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225370-225530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225779-225957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226107-226284:1:exon

CAPN15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CAPN15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calpain-15
translation: MAAVHEWSCTRCTFLNPVGQRQCSICEAPRQKPDLNHILRLSVEEQKWACARCTFKNFLGKETCEVCGFTPEPGPSGSPLPVINGILPKPAVLVEPKGTAKEEAAKAESSSEDSEGKSPDEAELESGWACQRCTLHNTPVANSCSACGGPRKLSLPKIPPEALVVPEVITPAGFHMAPSTPQSLVPTEISDGDAAAAQGPVAMEQEAQKMPAFSPFSPGLQNNPVPRSRREVPPQLQMPGPEAPQPGAQGTAGQKGSPQGQARAAPAARLQELLSNKRLSVLEEEMDVSPSHWKCSTCSLLNSAGTGKCEACSTQKGSDTINLVGDSVRFTPCSPSSPDFTTWSCSKCTLKNPTAAQKCKVCGSSKLHGFQEHSPQGEPSPRCPECGAGEKGSCSSCGTKAPSARKVARLFPSQLPGTQDRPGQWACPACTLLNELKAKHCVACHTPQQYVAQRKGLKPLKRRESMHVEKRRQTDEGEAKALWENIVTFCRENKVNFVDDSFHPGPKSVGFPEGDSVQQRVKQWLRPHEINCNIFKDRSVKWSVFRTPRPSDILQGLLGNCWFLSALAVLAERPELVERVMITRTLCPEGAYQVRLCKDGTWTTVLVDDMLPCDECGYLLFSQAQRKQLWVALIEKALAKLHGSYFALQAGRAIEGLATLTGAPCESLMLQVSSTNPREEPIDTDLIWAKMLSSKEAGFLMGASCGGGNMKVDDVAYESMGLRPRHAYSILDVRDVQGFRLLRLRNPWGRFSWNGSWSDEWPHWPAPLRHDLMPHGSSEGVFWMEYSDFIKYFDSVDICKLHSDWHEVRVQGMFPNKANGPVTVTSLTVLERAALEFALFQEGSRRSDAVDSHLLDLCIMVFRATFTSGNKLSLGRLMAHSKRAVKKFVSCDVMLEPGEYAVVCCAFNHWSAALAGPTAAQASSPTSSRPATDYSSYILAIYSSRLVMVEQVEAQPTTLADAIILLTENKGERHEGREGMTCYYLTHGWAGLIVVVENRHPKSYLHVQCDCTDSFNVVSTRGSLKTQDSVPPLHRQVLVILSQLEGNAGFSITHRLAHRKATQAFLNDWMSTKGTHNPLLTPEVAGLHGPRPL
SIO_010081: CAPN15
subclass of: SO_0000673
so part of: CAPN15
location: join(214741..216216,219074..219282,219478..219661,222105..222328,223195..223320,223434..223586,223952..224113,224948..225177,225370..225530,225779..225957,226107..226284)
location: region:214741-226284:1
so has part: feature:214741-216216:1:exon
so has part: feature:219074-219282:1:exon
so has part: feature:219478-219661:1:exon
so has part: feature:222105-222328:1:exon
so has part: feature:223195-223320:1:exon
so has part: feature:223434-223586:1:exon
so has part: feature:223952-224113:1:exon
so has part: feature:224948-225177:1:exon
so has part: feature:225370-225530:1:exon
so has part: feature:225779-225957:1:exon
so has part: feature:226107-226284:1:exon

XP_010717608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:214741-216216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:219074-219282:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:219478-219661:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:222105-222328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:223195-223320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223434-223586:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223952-224113:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:224948-225177:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225370-225530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225779-225957:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226107-226284:1:exon

LOC104913344
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 230965..236906
location: region:230965-236906:1
so has part: feature:230965-236906:1:exon
subclass of: SO_0000011

104913344
type: Gene
SIO_000068: ncbigene

position:230965:1
position: 230965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236906:1
position: 236906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230965-236906:1:exon

LOC104913344
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913344
product: uncharacterized LOC104913344, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_795309.3
SIO_010081: LOC104913344
subclass of: SO_0000673
so part of: LOC104913344
location: join(230965..232708,232795..232977,235463..235515,236540..236906)
location: region:230965-236906:1
so has part: feature:230965-232708:1:exon
so has part: feature:232795-232977:1:exon
so has part: feature:235463-235515:1:exon
so has part: feature:236540-236906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230965-232708:1:exon

position:232708:1
position: 232708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232795-232977:1:exon

position:232795:1
position: 232795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232977:1
position: 232977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:235463-235515:1:exon

position:235463:1
position: 235463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235515:1
position: 235515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:236540-236906:1:exon

position:236540:1
position: 236540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913344
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913344
product: uncharacterized LOC104913344, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XR_795310.3
SIO_010081: LOC104913344
subclass of: SO_0000673
so part of: LOC104913344
location: join(232055..232708,232795..232977,236540..236898)
location: region:232055-236898:1
so has part: feature:232055-232708:1:exon
so has part: feature:232795-232977:1:exon
so has part: feature:236540-236898:1:exon

position:232055:1
position: 232055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236898:1
position: 236898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232055-232708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232795-232977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:236540-236898:1:exon

LOC104913344
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913344
product: uncharacterized LOC104913344, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XR_004161468.1
SIO_010081: LOC104913344
subclass of: SO_0000673
so part of: LOC104913344
location: join(232056..232708,232795..232977,235463..236519)
location: region:232056-236519:1
so has part: feature:232056-232708:1:exon
so has part: feature:232795-232977:1:exon
so has part: feature:235463-236519:1:exon

position:232056:1
position: 232056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236519:1
position: 236519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:232056-232708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:232795-232977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:235463-236519:1:exon

NDUFB6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NDUFB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <241585..243500
location: region:241585-243500:1
so has part: feature:241585-243500:1:exon
subclass of: SO_0000010

104913465
type: Gene
SIO_000068: ncbigene

position:241585:1
position: 241585
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:243500:1
position: 243500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241585-243500:1:exon

NDUFB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NDUFB6
product: NADH:ubiquinone oxidoreductase subunit B6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010719727.3
SIO_010081: NDUFB6
subclass of: SO_0000673
so part of: NDUFB6
location: join(<241585..241689,242285..242329,243345..243500)
location: region:241585-243500:1
so has part: feature:241585-241689:1:exon
so has part: feature:242285-242329:1:exon
so has part: feature:243345-243500:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:241585-241689:1:exon

position:241689:1
position: 241689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:242285-242329:1:exon

position:242285:1
position: 242285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:242329:1
position: 242329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:243345-243500:1:exon

position:243345:1
position: 243345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDUFB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NDUFB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6
translation: AVPQVFNAYQTSGFIFMRVLIPAWLLHYYLKYHVSKKPYGIVVSNPAIFPGDRILETGEVVPPLADEPSEHH
SIO_010081: NDUFB6
subclass of: SO_0000673
so part of: NDUFB6
location: join(<241585..241689,242285..242329,243345..243413)
location: region:241585-243413:1
so has part: feature:241585-241689:1:exon
so has part: feature:242285-242329:1:exon
so has part: feature:243345-243413:1:exon

XP_010718029.1
type: Protein
SIO_000068: ncbiprotein

position:243413:1
position: 243413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241585-241689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242285-242329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:243345-243413:1:exon

LOC104913345
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913345
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(248310..249008)
location: region:248310-249008:-1
so has part: feature:248310-249008:-1:exon
subclass of: SO_0000011

104913345
type: Gene
SIO_000068: ncbigene

position:248310:-1
position: 248310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249008:-1
position: 249008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:248310-249008:-1:exon

LOC104913345
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913345
product: uncharacterized LOC104913345
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 208 samples with support for all annotated introns
transcript id: XR_795311.2
SIO_010081: LOC104913345
subclass of: SO_0000673
so part of: LOC104913345
location: complement(join(248310..248628,248740..248820,248953..249008))
location: region:248310-249008:-1
so has part: feature:248953-249008:-1:exon
so has part: feature:248740-248820:-1:exon
so has part: feature:248310-248628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:248953-249008:-1:exon

position:248953:-1
position: 248953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248740-248820:-1:exon

position:248740:-1
position: 248740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248820:-1
position: 248820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:248310-248628:-1:exon

position:248628:-1
position: 248628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913466
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <249466..253337
location: region:249466-253337:1
so has part: feature:249466-253337:1:exon
subclass of: SO_0000010

104913466
type: Gene
SIO_000068: ncbigene

position:249466:1
position: 249466
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:253337:1
position: 253337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249466-253337:1:exon

LOC104913466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913466
product: chitobiosyldiphosphodolichol beta-mannosyltransferase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_019620593.2
SIO_010081: LOC104913466
subclass of: SO_0000673
so part of: LOC104913466
location: join(<249466..249580,251105..251219,251937..252012,252351..253337)
location: region:249466-253337:1
so has part: feature:249466-249580:1:exon
so has part: feature:251105-251219:1:exon
so has part: feature:251937-252012:1:exon
so has part: feature:252351-253337:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249466-249580:1:exon

position:249580:1
position: 249580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:251105-251219:1:exon

position:251105:1
position: 251105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:251219:1
position: 251219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:251937-252012:1:exon

position:251937:1
position: 251937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:252012:1
position: 252012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:252351-253337:1:exon

position:252351:1
position: 252351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chitobiosyldiphosphodolichol beta-mannosyltransferase-like
translation: KGKGPLKEYYNGLIKKLHFKHIQICTPWLEAEDYPVLLGSADLGVCLHKSSSGLDLPMKVVDMFGCCLPVCAIYFECLHELVKHDENGLIFRDSDELAEQLKMLFLEFPTLEGKLHEFRKNLRASKQLSWDESWDQTVLPLLSQSE
SIO_010081: LOC104913466
subclass of: SO_0000673
so part of: LOC104913466
location: join(<249466..249580,251105..251219,251937..252012,252351..252485)
location: region:249466-252485:1
so has part: feature:249466-249580:1:exon
so has part: feature:251105-251219:1:exon
so has part: feature:251937-252012:1:exon
so has part: feature:252351-252485:1:exon

XP_019476138.1
type: Protein
SIO_000068: ncbiprotein

position:252485:1
position: 252485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249466-249580:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:251105-251219:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:251937-252012:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:252351-252485:1:exon

EEF2KMT
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: EEF2KMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(254544..>258219)
location: region:254544-258219:-1
so has part: feature:254544-258219:-1:exon
subclass of: SO_0000010

100548562
type: Gene
SIO_000068: ncbigene

position:254544:-1
position: 254544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:258219:-1
position: 258219
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254544-258219:-1:exon

EEF2KMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EEF2KMT
product: eukaryotic elongation factor 2 lysine methyltransferase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010719307.3
SIO_010081: EEF2KMT
subclass of: SO_0000673
so part of: EEF2KMT
location: complement(join(254544..255083,255685..255831,256751..257046,257978..>258219))
location: region:254544-258219:-1
so has part: feature:257978-258219:-1:exon
so has part: feature:256751-257046:-1:exon
so has part: feature:255685-255831:-1:exon
so has part: feature:254544-255083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:257978-258219:-1:exon

position:257978:-1
position: 257978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:256751-257046:-1:exon

position:256751:-1
position: 256751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257046:-1
position: 257046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:255685-255831:-1:exon

position:255685:-1
position: 255685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255831:-1
position: 255831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:254544-255083:-1:exon

position:255083:-1
position: 255083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EEF2KMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EEF2KMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-lysine N-methyltransferase EEF2KMT
translation: SVFITSRNPECFQFSFPGCSTAAFADISLSPVCDLQPSGEPVTLSENVAIISEGTTGLVTWDAALHLAEWATENPKVFTNRTVLELGSGVGFTGLVICKTCNPKTYIFSDYHHCVLKQLTENIRLNGFTLEPETTNPAQGQEAEGQKYQQPKLIVAELDWGSVTEKQLLALQADVIIAADVVYDPEVTFSLIGMLQKFSTLRADRKPEVYIALTVRNADTYHVFQAELDKAGIRWQIIPAHSSSIFLHDTQPNVTILQLFI
SIO_010081: EEF2KMT
subclass of: SO_0000673
so part of: EEF2KMT
location: complement(join(254983..255083,255685..255831,256751..257046,257978..>258219))
location: region:254983-258219:-1
so has part: feature:257978-258219:-1:exon
so has part: feature:256751-257046:-1:exon
so has part: feature:255685-255831:-1:exon
so has part: feature:254983-255083:-1:exon

XP_010717609.3
type: Protein
SIO_000068: ncbiprotein

position:254983:-1
position: 254983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257978-258219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:256751-257046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:255685-255831:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:254983-255083:-1:exon

LOC100548716
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100548716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 258502..262939
location: region:258502-262939:1
so has part: feature:258502-262939:1:exon
subclass of: SO_0000010

100548716
type: Gene
SIO_000068: ncbigene

position:258502:1
position: 258502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262939:1
position: 262939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258502-262939:1:exon

LOC100548716
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100548716
product: chitobiosyldiphosphodolichol beta-mannosyltransferase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 209 samples with support for all annotated introns
transcript id: XM_010719308.2
SIO_010081: LOC100548716
subclass of: SO_0000673
so part of: LOC100548716
location: join(258502..258823,259338..259486,260525..260614,260837..260953,261861..261982,262236..262274,262842..262939)
location: region:258502-262939:1
so has part: feature:258502-258823:1:exon
so has part: feature:259338-259486:1:exon
so has part: feature:260525-260614:1:exon
so has part: feature:260837-260953:1:exon
so has part: feature:261861-261982:1:exon
so has part: feature:262236-262274:1:exon
so has part: feature:262842-262939:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:258502-258823:1:exon

position:258823:1
position: 258823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259338-259486:1:exon

position:259338:1
position: 259338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259486:1
position: 259486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260525-260614:1:exon

position:260525:1
position: 260525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260614:1
position: 260614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:260837-260953:1:exon

position:260837:1
position: 260837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260953:1
position: 260953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:261861-261982:1:exon

position:261861:1
position: 261861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261982:1
position: 261982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:262236-262274:1:exon

position:262236:1
position: 262236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262274:1
position: 262274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:262842-262939:1:exon

position:262842:1
position: 262842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100548716
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100548716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chitobiosyldiphosphodolichol beta-mannosyltransferase-like
translation: MLRMDPPSYVLLQNPPGLPSIAVAWVACLFWRSKLIIDWHNYGYTIMSLNHGRNHPLVLIAKWYEKLFGRLSDCNLCVTDAMKEDLWVNCNIKAVTLYDRPASYFKETPLEVQHQLYMKLAKDYEPFKPQHVTESVSWNAERSAFTERDEKSGAVMKSRGRPALLISSTSWTEDEDFSVLLKALEDYEQYISEGVKLPALVCVITGNAFFVL
SIO_010081: LOC100548716
subclass of: SO_0000673
so part of: LOC100548716
location: join(258785..258823,259338..259486,260525..260614,260837..260953,261861..261982,262236..262274,262842..262924)
location: region:258785-262924:1
so has part: feature:258785-258823:1:exon
so has part: feature:259338-259486:1:exon
so has part: feature:260525-260614:1:exon
so has part: feature:260837-260953:1:exon
so has part: feature:261861-261982:1:exon
so has part: feature:262236-262274:1:exon
so has part: feature:262842-262924:1:exon

XP_010717610.1
type: Protein
SIO_000068: ncbiprotein

position:258785:1
position: 258785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262924:1
position: 262924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:258785-258823:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:259338-259486:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260525-260614:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260837-260953:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261861-261982:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262236-262274:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:262842-262924:1:exon

SEC14L5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SEC14L5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 268446..303568
location: region:268446-303568:1
so has part: feature:268446-303568:1:exon
subclass of: SO_0000010

100545956
type: Gene
SIO_000068: ncbigene

position:268446:1
position: 268446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303568:1
position: 303568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:268446-303568:1:exon

SEC14L5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SEC14L5
product: SEC14 like lipid binding 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019620656.2
SIO_010081: SEC14L5
subclass of: SO_0000673
so part of: SEC14L5
location: join(268446..268571,271361..271456,271694..271883,273357..273432,286410..286559,286689..286820,289135..289263,289875..290094,291823..291935,296033..296222,296876..296964,297492..297562,298184..298355,299010..299144,299516..299653,300443..300688,301364..301542,302836..303568)
location: region:268446-303568:1
so has part: feature:268446-268571:1:exon
so has part: feature:271361-271456:1:exon
so has part: feature:271694-271883:1:exon
so has part: feature:273357-273432:1:exon
so has part: feature:286410-286559:1:exon
so has part: feature:286689-286820:1:exon
so has part: feature:289135-289263:1:exon
so has part: feature:289875-290094:1:exon
so has part: feature:291823-291935:1:exon
so has part: feature:296033-296222:1:exon
so has part: feature:296876-296964:1:exon
so has part: feature:297492-297562:1:exon
so has part: feature:298184-298355:1:exon
so has part: feature:299010-299144:1:exon
so has part: feature:299516-299653:1:exon
so has part: feature:300443-300688:1:exon
so has part: feature:301364-301542:1:exon
so has part: feature:302836-303568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:268446-268571:1:exon

position:268571:1
position: 268571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:271361-271456:1:exon

position:271361:1
position: 271361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271456:1
position: 271456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:271694-271883:1:exon

position:271694:1
position: 271694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271883:1
position: 271883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:273357-273432:1:exon

position:273357:1
position: 273357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273432:1
position: 273432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:286410-286559:1:exon

position:286410:1
position: 286410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286559:1
position: 286559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:286689-286820:1:exon

position:286689:1
position: 286689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286820:1
position: 286820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:289135-289263:1:exon

position:289135:1
position: 289135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289263:1
position: 289263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:289875-290094:1:exon

position:289875:1
position: 289875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290094:1
position: 290094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291823-291935:1:exon

position:291823:1
position: 291823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291935:1
position: 291935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:296033-296222:1:exon

position:296033:1
position: 296033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296222:1
position: 296222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:296876-296964:1:exon

position:296876:1
position: 296876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296964:1
position: 296964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:297492-297562:1:exon

position:297492:1
position: 297492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297562:1
position: 297562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:298184-298355:1:exon

position:298184:1
position: 298184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298355:1
position: 298355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:299010-299144:1:exon

position:299010:1
position: 299010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299144:1
position: 299144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:299516-299653:1:exon

position:299516:1
position: 299516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299653:1
position: 299653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:300443-300688:1:exon

position:300443:1
position: 300443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300688:1
position: 300688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:301364-301542:1:exon

position:301364:1
position: 301364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:301542:1
position: 301542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:302836-303568:1:exon

position:302836:1
position: 302836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEC14L5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SEC14L5
product: SEC14 like lipid binding 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010719310.3
SIO_010081: SEC14L5
subclass of: SO_0000673
so part of: SEC14L5
location: join(268446..268571,271361..271456,271694..271827,273357..273432,286410..286559,286689..286820,289135..289263,289875..290094,291823..291935,296033..296222,296876..296964,297492..297562,298184..298355,299010..299144,299516..299653,300443..300688,301364..301542,302836..303568)
location: region:268446-303568:1
so has part: feature:268446-268571:1:exon
so has part: feature:271361-271456:1:exon
so has part: feature:271694-271827:1:exon
so has part: feature:273357-273432:1:exon
so has part: feature:286410-286559:1:exon
so has part: feature:286689-286820:1:exon
so has part: feature:289135-289263:1:exon
so has part: feature:289875-290094:1:exon
so has part: feature:291823-291935:1:exon
so has part: feature:296033-296222:1:exon
so has part: feature:296876-296964:1:exon
so has part: feature:297492-297562:1:exon
so has part: feature:298184-298355:1:exon
so has part: feature:299010-299144:1:exon
so has part: feature:299516-299653:1:exon
so has part: feature:300443-300688:1:exon
so has part: feature:301364-301542:1:exon
so has part: feature:302836-303568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:268446-268571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271361-271456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:271694-271827:1:exon

position:271827:1
position: 271827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:273357-273432:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286410-286559:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:286689-286820:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289135-289263:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:289875-290094:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291823-291935:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:296033-296222:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:296876-296964:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:297492-297562:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:298184-298355:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:299010-299144:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:299516-299653:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:300443-300688:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:301364-301542:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:302836-303568:1:exon

SEC14L5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SEC14L5
product: SEC14 like lipid binding 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_010719309.3
SIO_010081: SEC14L5
subclass of: SO_0000673
so part of: SEC14L5
location: join(268446..268571,271361..271456,273357..273432,286410..286559,286689..286820,289135..289263,289875..290094,291823..291935,296033..296222,296876..296964,297492..297562,298184..298355,299010..299144,299516..299653,300443..300688,301364..301542,302836..303568)
location: region:268446-303568:1
so has part: feature:268446-268571:1:exon
so has part: feature:271361-271456:1:exon
so has part: feature:273357-273432:1:exon
so has part: feature:286410-286559:1:exon
so has part: feature:286689-286820:1:exon
so has part: feature:289135-289263:1:exon
so has part: feature:289875-290094:1:exon
so has part: feature:291823-291935:1:exon
so has part: feature:296033-296222:1:exon
so has part: feature:296876-296964:1:exon
so has part: feature:297492-297562:1:exon
so has part: feature:298184-298355:1:exon
so has part: feature:299010-299144:1:exon
so has part: feature:299516-299653:1:exon
so has part: feature:300443-300688:1:exon
so has part: feature:301364-301542:1:exon
so has part: feature:302836-303568:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:268446-268571:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:271361-271456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:273357-273432:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286410-286559:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:286689-286820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289135-289263:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:289875-290094:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291823-291935:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:296033-296222:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:296876-296964:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:297492-297562:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:298184-298355:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:299010-299144:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:299516-299653:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:300443-300688:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:301364-301542:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:302836-303568:1:exon

SEC14L5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SEC14L5
product: SEC14 like lipid binding 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_010719312.3
SIO_010081: SEC14L5
subclass of: SO_0000673
so part of: SEC14L5
location: join(271921..272206,273357..273432,286410..286559,286689..286820,289135..289263,289875..290094,291823..291935,296033..296222,296876..296964,297492..297562,298184..298355,299010..299144,299516..299653,300443..300688,301364..301542,302836..303568)
location: region:271921-303568:1
so has part: feature:271921-272206:1:exon
so has part: feature:273357-273432:1:exon
so has part: feature:286410-286559:1:exon
so has part: feature:286689-286820:1:exon
so has part: feature:289135-289263:1:exon
so has part: feature:289875-290094:1:exon
so has part: feature:291823-291935:1:exon
so has part: feature:296033-296222:1:exon
so has part: feature:296876-296964:1:exon
so has part: feature:297492-297562:1:exon
so has part: feature:298184-298355:1:exon
so has part: feature:299010-299144:1:exon
so has part: feature:299516-299653:1:exon
so has part: feature:300443-300688:1:exon
so has part: feature:301364-301542:1:exon
so has part: feature:302836-303568:1:exon

position:271921:1
position: 271921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:271921-272206:1:exon

position:272206:1
position: 272206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:273357-273432:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286410-286559:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286689-286820:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289135-289263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:289875-290094:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:291823-291935:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296033-296222:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:296876-296964:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:297492-297562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:298184-298355:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:299010-299144:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:299516-299653:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:300443-300688:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:301364-301542:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:302836-303568:1:exon

SEC14L5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SEC14L5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SEC14-like protein 5
translation: MVQKYQSPVRVYKYPFELVMAAYEKRFPTCPEIPVFLGSEILHESKSDDGAIHIIERSCKLNVDAPRLLKKIAGVEYVFFIQKNTVNWKERTLRIEAHNETFANRVVVLETCSYSVHPENEEWTCFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKRGKEVIEHYLKELISQGITFIPRWTPPVAQGQKAEQAPAASHDTSDAALEAGAHGATKEQTGSSCPPAEPVSPDADKLDADYIERYLGQLTPMQESCLIRLRQWLQETHKGKIPKDEHILRFLRARDFNIDKAREMLCQSLSWRKQYQVDYILQSWRPPALLDEYYTGGWHYQDRDGRPLYILRLGQMDTKGLVKALGEESLLRHVLSINEEGQKRCEENTNLFGRPITSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEDNYPETLGRLLIVRAPRVFPVLWTLVSPFINENTRQKFLIYSGNNYQGPGGLVDYVDKEVIPDFLGGDCMCTVPEGGLVPKSLYQTDEEPENADHIRLWTETIYHSASVLRGAPHEIVVEILEGESVITWDFDILKGDVVFSLFHSKRAPETSHKEATLPSTSAAGDNVQLIDKTWVLGVDYSRVESPLVCREGESIQGSHVTRWPGFYILQWKMHGPLPCSGTSLPRVDDVLASLQVSSHKCKLIYYYEVLASKDFRGSMSSLESCNSGFSQLSGATTSSSQSQSSSHLSR
SIO_010081: SEC14L5
subclass of: SO_0000673
so part of: SEC14L5
location: join(273370..273432,286410..286559,286689..286820,289135..289263,289875..290094,291823..291935,296033..296222,296876..296964,297492..297562,298184..298355,299010..299144,299516..299653,300443..300688,301364..301542,302836..302941)
location: region:273370-302941:1
so has part: feature:273370-273432:1:exon
so has part: feature:286410-286559:1:exon
so has part: feature:286689-286820:1:exon
so has part: feature:289135-289263:1:exon
so has part: feature:289875-290094:1:exon
so has part: feature:291823-291935:1:exon
so has part: feature:296033-296222:1:exon
so has part: feature:296876-296964:1:exon
so has part: feature:297492-297562:1:exon
so has part: feature:298184-298355:1:exon
so has part: feature:299010-299144:1:exon
so has part: feature:299516-299653:1:exon
so has part: feature:300443-300688:1:exon
so has part: feature:301364-301542:1:exon
so has part: feature:302836-302941:1:exon

XP_019476201.1
type: Protein
SIO_000068: ncbiprotein

position:273370:1
position: 273370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302941:1
position: 302941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273370-273432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286410-286559:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286689-286820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289135-289263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289875-290094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291823-291935:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296033-296222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296876-296964:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:297492-297562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:298184-298355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:299010-299144:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:299516-299653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:300443-300688:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:301364-301542:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302836-302941:1:exon

SEC14L5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SEC14L5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SEC14-like protein 5
translation: MVQKYQSPVRVYKYPFELVMAAYEKRFPTCPEIPVFLGSEILHESKSDDGAIHIIERSCKLNVDAPRLLKKIAGVEYVFFIQKNTVNWKERTLRIEAHNETFANRVVVLETCSYSVHPENEEWTCFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKRGKEVIEHYLKELISQGITFIPRWTPPVAQGQKAEQAPAASHDTSDAALEAGAHGATKEQTGSSCPPAEPVSPDADKLDADYIERYLGQLTPMQESCLIRLRQWLQETHKGKIPKDEHILRFLRARDFNIDKAREMLCQSLSWRKQYQVDYILQSWRPPALLDEYYTGGWHYQDRDGRPLYILRLGQMDTKGLVKALGEESLLRHVLSINEEGQKRCEENTNLFGRPITSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEDNYPETLGRLLIVRAPRVFPVLWTLVSPFINENTRQKFLIYSGNNYQGPGGLVDYVDKEVIPDFLGGDCMCTVPEGGLVPKSLYQTDEEPENADHIRLWTETIYHSASVLRGAPHEIVVEILEGESVITWDFDILKGDVVFSLFHSKRAPETSHKEATLPSTSAAGDNVQLIDKTWVLGVDYSRVESPLVCREGESIQGSHVTRWPGFYILQWKMHGPLPCSGTSLPRVDDVLASLQVSSHKCKLIYYYEVLASKDFRGSMSSLESCNSGFSQLSGATTSSSQSQSSSHLSR
SIO_010081: SEC14L5
subclass of: SO_0000673
so part of: SEC14L5
location: join(273370..273432,286410..286559,286689..286820,289135..289263,289875..290094,291823..291935,296033..296222,296876..296964,297492..297562,298184..298355,299010..299144,299516..299653,300443..300688,301364..301542,302836..302941)
location: region:273370-302941:1
so has part: feature:273370-273432:1:exon
so has part: feature:286410-286559:1:exon
so has part: feature:286689-286820:1:exon
so has part: feature:289135-289263:1:exon
so has part: feature:289875-290094:1:exon
so has part: feature:291823-291935:1:exon
so has part: feature:296033-296222:1:exon
so has part: feature:296876-296964:1:exon
so has part: feature:297492-297562:1:exon
so has part: feature:298184-298355:1:exon
so has part: feature:299010-299144:1:exon
so has part: feature:299516-299653:1:exon
so has part: feature:300443-300688:1:exon
so has part: feature:301364-301542:1:exon
so has part: feature:302836-302941:1:exon

XP_010717611.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273370-273432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286410-286559:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286689-286820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289135-289263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289875-290094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291823-291935:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296033-296222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296876-296964:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:297492-297562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:298184-298355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:299010-299144:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:299516-299653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:300443-300688:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:301364-301542:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302836-302941:1:exon

SEC14L5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SEC14L5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SEC14-like protein 5
translation: MVQKYQSPVRVYKYPFELVMAAYEKRFPTCPEIPVFLGSEILHESKSDDGAIHIIERSCKLNVDAPRLLKKIAGVEYVFFIQKNTVNWKERTLRIEAHNETFANRVVVLETCSYSVHPENEEWTCFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKRGKEVIEHYLKELISQGITFIPRWTPPVAQGQKAEQAPAASHDTSDAALEAGAHGATKEQTGSSCPPAEPVSPDADKLDADYIERYLGQLTPMQESCLIRLRQWLQETHKGKIPKDEHILRFLRARDFNIDKAREMLCQSLSWRKQYQVDYILQSWRPPALLDEYYTGGWHYQDRDGRPLYILRLGQMDTKGLVKALGEESLLRHVLSINEEGQKRCEENTNLFGRPITSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEDNYPETLGRLLIVRAPRVFPVLWTLVSPFINENTRQKFLIYSGNNYQGPGGLVDYVDKEVIPDFLGGDCMCTVPEGGLVPKSLYQTDEEPENADHIRLWTETIYHSASVLRGAPHEIVVEILEGESVITWDFDILKGDVVFSLFHSKRAPETSHKEATLPSTSAAGDNVQLIDKTWVLGVDYSRVESPLVCREGESIQGSHVTRWPGFYILQWKMHGPLPCSGTSLPRVDDVLASLQVSSHKCKLIYYYEVLASKDFRGSMSSLESCNSGFSQLSGATTSSSQSQSSSHLSR
SIO_010081: SEC14L5
subclass of: SO_0000673
so part of: SEC14L5
location: join(273370..273432,286410..286559,286689..286820,289135..289263,289875..290094,291823..291935,296033..296222,296876..296964,297492..297562,298184..298355,299010..299144,299516..299653,300443..300688,301364..301542,302836..302941)
location: region:273370-302941:1
so has part: feature:273370-273432:1:exon
so has part: feature:286410-286559:1:exon
so has part: feature:286689-286820:1:exon
so has part: feature:289135-289263:1:exon
so has part: feature:289875-290094:1:exon
so has part: feature:291823-291935:1:exon
so has part: feature:296033-296222:1:exon
so has part: feature:296876-296964:1:exon
so has part: feature:297492-297562:1:exon
so has part: feature:298184-298355:1:exon
so has part: feature:299010-299144:1:exon
so has part: feature:299516-299653:1:exon
so has part: feature:300443-300688:1:exon
so has part: feature:301364-301542:1:exon
so has part: feature:302836-302941:1:exon

XP_010717612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273370-273432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286410-286559:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286689-286820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289135-289263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289875-290094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291823-291935:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296033-296222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296876-296964:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:297492-297562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:298184-298355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:299010-299144:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:299516-299653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:300443-300688:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:301364-301542:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302836-302941:1:exon

SEC14L5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SEC14L5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SEC14-like protein 5
translation: MVQKYQSPVRVYKYPFELVMAAYEKRFPTCPEIPVFLGSEILHESKSDDGAIHIIERSCKLNVDAPRLLKKIAGVEYVFFIQKNTVNWKERTLRIEAHNETFANRVVVLETCSYSVHPENEEWTCFEQSASLDIKSFFGFESTVEKIAMKQYTSNIKRGKEVIEHYLKELISQGITFIPRWTPPVAQGQKAEQAPAASHDTSDAALEAGAHGATKEQTGSSCPPAEPVSPDADKLDADYIERYLGQLTPMQESCLIRLRQWLQETHKGKIPKDEHILRFLRARDFNIDKAREMLCQSLSWRKQYQVDYILQSWRPPALLDEYYTGGWHYQDRDGRPLYILRLGQMDTKGLVKALGEESLLRHVLSINEEGQKRCEENTNLFGRPITSWTCLVDLEGLNMRHLWRPGVKALLRIIEVVEDNYPETLGRLLIVRAPRVFPVLWTLVSPFINENTRQKFLIYSGNNYQGPGGLVDYVDKEVIPDFLGGDCMCTVPEGGLVPKSLYQTDEEPENADHIRLWTETIYHSASVLRGAPHEIVVEILEGESVITWDFDILKGDVVFSLFHSKRAPETSHKEATLPSTSAAGDNVQLIDKTWVLGVDYSRVESPLVCREGESIQGSHVTRWPGFYILQWKMHGPLPCSGTSLPRVDDVLASLQVSSHKCKLIYYYEVLASKDFRGSMSSLESCNSGFSQLSGATTSSSQSQSSSHLSR
SIO_010081: SEC14L5
subclass of: SO_0000673
so part of: SEC14L5
location: join(273370..273432,286410..286559,286689..286820,289135..289263,289875..290094,291823..291935,296033..296222,296876..296964,297492..297562,298184..298355,299010..299144,299516..299653,300443..300688,301364..301542,302836..302941)
location: region:273370-302941:1
so has part: feature:273370-273432:1:exon
so has part: feature:286410-286559:1:exon
so has part: feature:286689-286820:1:exon
so has part: feature:289135-289263:1:exon
so has part: feature:289875-290094:1:exon
so has part: feature:291823-291935:1:exon
so has part: feature:296033-296222:1:exon
so has part: feature:296876-296964:1:exon
so has part: feature:297492-297562:1:exon
so has part: feature:298184-298355:1:exon
so has part: feature:299010-299144:1:exon
so has part: feature:299516-299653:1:exon
so has part: feature:300443-300688:1:exon
so has part: feature:301364-301542:1:exon
so has part: feature:302836-302941:1:exon

XP_010717614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:273370-273432:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:286410-286559:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:286689-286820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289135-289263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289875-290094:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291823-291935:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:296033-296222:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:296876-296964:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:297492-297562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:298184-298355:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:299010-299144:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:299516-299653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:300443-300688:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:301364-301542:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:302836-302941:1:exon

NAGPA
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NAGPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(307071..>317523)
location: region:307071-317523:-1
so has part: feature:307071-317523:-1:exon
subclass of: SO_0000010

100548255
type: Gene
SIO_000068: ncbigene

position:307071:-1
position: 307071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317523:-1
position: 317523
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307071-317523:-1:exon

NAGPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NAGPA
product: N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 210 samples with support for all annotated introns
transcript id: XM_010719729.3
SIO_010081: NAGPA
subclass of: SO_0000673
so part of: NAGPA
location: complement(join(307071..308622,309116..309176,309380..309511,310659..310787,311212..311259,311533..311741,312500..312628,312960..313068,313590..313729,317066..>317523))
location: region:307071-317523:-1
so has part: feature:317066-317523:-1:exon
so has part: feature:313590-313729:-1:exon
so has part: feature:312960-313068:-1:exon
so has part: feature:312500-312628:-1:exon
so has part: feature:311533-311741:-1:exon
so has part: feature:311212-311259:-1:exon
so has part: feature:310659-310787:-1:exon
so has part: feature:309380-309511:-1:exon
so has part: feature:309116-309176:-1:exon
so has part: feature:307071-308622:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317066-317523:-1:exon

position:317066:-1
position: 317066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:313590-313729:-1:exon

position:313590:-1
position: 313590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313729:-1
position: 313729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:312960-313068:-1:exon

position:312960:-1
position: 312960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313068:-1
position: 313068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:312500-312628:-1:exon

position:312500:-1
position: 312500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312628:-1
position: 312628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:311533-311741:-1:exon

position:311533:-1
position: 311533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311741:-1
position: 311741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:311212-311259:-1:exon

position:311212:-1
position: 311212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311259:-1
position: 311259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:310659-310787:-1:exon

position:310659:-1
position: 310659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310787:-1
position: 310787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:309380-309511:-1:exon

position:309380:-1
position: 309380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309511:-1
position: 309511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:309116-309176:-1:exon

position:309116:-1
position: 309116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309176:-1
position: 309176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:307071-308622:-1:exon

position:308622:-1
position: 308622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAGPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NAGPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
translation: PYPPGQHGPRHSHRHVRACQPVRHGNVTHEAWPGDNSTGLPAATTRTFVSYISSAEKQRRAVYGHFTFVRNPLKTLSVLEPGGAGGCGEQRRVTVEETARLGRCLVAQNGGYFDMSSGKCLGNVVSDGRLVQNARGLQNAQFGIRRDGSMVFGYLSEEDVLDQVNPFVQLVSGVVWLLRDGEVYINQSQIAECDETQTTGTFEKFISVISARTAVGHDSQGQLVLVHVDGQTESRGINLWEMAEFLKQQGIINAINLDGGGSATLVLNGTLASYPSEHCSFDNMWRCPRSISTIVCVHEPACEPADCSGHGECVQGQCHCAGDFWRGPACDTLDCGPSNCSLHGTCTASGCLCEAGWVGSNCSEACLSGFYGNACSQKCQCQNGGSCDPVHGTCSCPAGYYGTSCEHACPMGRYGPNCQQLCACEHSCPCNPQTGSCNITYELAIQDQLNKAWRCLASPDKEKSNEKFSLSERTWISVTFVLALLLAISAMGNVGLFLKARSERQQGGGDYRYHPLREMNGEASHTFTSAACEAEDAQDQSQTLL
SIO_010081: NAGPA
subclass of: SO_0000673
so part of: NAGPA
location: complement(join(308400..308622,309116..309176,309380..309511,310659..310787,311212..311259,311533..311741,312500..312628,312960..313068,313590..313729,317066..>317523))
location: region:308400-317523:-1
so has part: feature:317066-317523:-1:exon
so has part: feature:313590-313729:-1:exon
so has part: feature:312960-313068:-1:exon
so has part: feature:312500-312628:-1:exon
so has part: feature:311533-311741:-1:exon
so has part: feature:311212-311259:-1:exon
so has part: feature:310659-310787:-1:exon
so has part: feature:309380-309511:-1:exon
so has part: feature:309116-309176:-1:exon
so has part: feature:308400-308622:-1:exon

XP_010718031.1
type: Protein
SIO_000068: ncbiprotein

position:308400:-1
position: 308400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317066-317523:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:313590-313729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:312960-313068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312500-312628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311533-311741:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311212-311259:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310659-310787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:309380-309511:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309116-309176:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308400-308622:-1:exon

LOC100548106
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100548106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 317704..329779
location: region:317704-329779:1
so has part: feature:317704-329779:1:exon
subclass of: SO_0000010

100548106
type: Gene
SIO_000068: ncbigene

position:317704:1
position: 317704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329779:1
position: 329779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317704-329779:1:exon

LOC100548106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100548106
product: syntaxin-binding protein 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019620657.1
SIO_010081: LOC100548106
subclass of: SO_0000673
so part of: LOC100548106
location: join(317704..317802,319963..320059,320560..320687,321755..321847,321973..322038,322189..322377,322680..322796,324140..324189,325071..325201,326542..326599,327615..329779)
location: region:317704-329779:1
so has part: feature:317704-317802:1:exon
so has part: feature:319963-320059:1:exon
so has part: feature:320560-320687:1:exon
so has part: feature:321755-321847:1:exon
so has part: feature:321973-322038:1:exon
so has part: feature:322189-322377:1:exon
so has part: feature:322680-322796:1:exon
so has part: feature:324140-324189:1:exon
so has part: feature:325071-325201:1:exon
so has part: feature:326542-326599:1:exon
so has part: feature:327615-329779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317704-317802:1:exon

position:317802:1
position: 317802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:319963-320059:1:exon

position:319963:1
position: 319963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320059:1
position: 320059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:320560-320687:1:exon

position:320560:1
position: 320560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320687:1
position: 320687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321755-321847:1:exon

position:321755:1
position: 321755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321847:1
position: 321847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:321973-322038:1:exon

position:321973:1
position: 321973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322038:1
position: 322038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:322189-322377:1:exon

position:322189:1
position: 322189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322377:1
position: 322377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:322680-322796:1:exon

position:322680:1
position: 322680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322796:1
position: 322796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:324140-324189:1:exon

position:324140:1
position: 324140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324189:1
position: 324189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:325071-325201:1:exon

position:325071:1
position: 325071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325201:1
position: 325201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:326542-326599:1:exon

position:326542:1
position: 326542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326599:1
position: 326599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:327615-329779:1:exon

position:327615:1
position: 327615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100548106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100548106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-binding protein 4-like
translation: MQDELDEAGLDSSSVLFTQHEVASLLDTSAFHSPTLDSLSCNGSEEMEQLQLEMTDLRQEVRRLKSLLKEVENSKKSMEDELQRLNQKALGFLSENRTLHSKLQMAEVVQRQAHSAEQDYEEVIHLLEAEIAELKMQLAGKKAKHVSEIEEDILELKRQLSLADGQLRKSEVSRKRLEICNRKLLLFVQNVHKVLSTHGHLQDEKRVNSETEEDKTDAVSDTSLPSSDLVDLLLSEAKELLAPMLSNKDASPCDRDQCLPAEGLPNYKDHLHQKTTWPPPSQNKGDQPQSPSPTKELPAKPT
SIO_010081: LOC100548106
subclass of: SO_0000673
so part of: LOC100548106
location: join(320586..320687,321755..321847,321973..322038,322189..322377,322680..322796,324140..324189,325071..325201,326542..326599,327615..327717)
location: region:320586-327717:1
so has part: feature:320586-320687:1:exon
so has part: feature:321755-321847:1:exon
so has part: feature:321973-322038:1:exon
so has part: feature:322189-322377:1:exon
so has part: feature:322680-322796:1:exon
so has part: feature:324140-324189:1:exon
so has part: feature:325071-325201:1:exon
so has part: feature:326542-326599:1:exon
so has part: feature:327615-327717:1:exon

XP_019476202.1
type: Protein
SIO_000068: ncbiprotein

position:320586:1
position: 320586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327717:1
position: 327717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320586-320687:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:321755-321847:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321973-322038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:322189-322377:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:322680-322796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:324140-324189:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:325071-325201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:326542-326599:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:327615-327717:1:exon

LOC104913467
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 337279..348890
location: region:337279-348890:1
so has part: feature:337279-348890:1:exon
subclass of: SO_0000010

104913467
type: Gene
SIO_000068: ncbigene

position:337279:1
position: 337279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348890:1
position: 348890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337279-348890:1:exon

LOC104913467
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913467
product: uncharacterized LOC104913467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555770.1
SIO_010081: LOC104913467
subclass of: SO_0000673
so part of: LOC104913467
location: join(337279..337382,338148..338233,338867..338987,341035..341176,341348..341454,341870..342023,343347..343419,345437..345548,348536..348890)
location: region:337279-348890:1
so has part: feature:337279-337382:1:exon
so has part: feature:338148-338233:1:exon
so has part: feature:338867-338987:1:exon
so has part: feature:341035-341176:1:exon
so has part: feature:341348-341454:1:exon
so has part: feature:341870-342023:1:exon
so has part: feature:343347-343419:1:exon
so has part: feature:345437-345548:1:exon
so has part: feature:348536-348890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337279-337382:1:exon

position:337382:1
position: 337382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:338148-338233:1:exon

position:338148:1
position: 338148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338233:1
position: 338233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:338867-338987:1:exon

position:338867:1
position: 338867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338987:1
position: 338987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:341035-341176:1:exon

position:341035:1
position: 341035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341176:1
position: 341176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:341348-341454:1:exon

position:341348:1
position: 341348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:341454:1
position: 341454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:341870-342023:1:exon

position:341870:1
position: 341870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342023:1
position: 342023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:343347-343419:1:exon

position:343347:1
position: 343347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343419:1
position: 343419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:345437-345548:1:exon

position:345437:1
position: 345437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345548:1
position: 345548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:348536-348890:1:exon

position:348536:1
position: 348536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913467
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104913467
translation: MTQRLSVCKSRLLSEETAAAVAFLQVVSWAGLAVRREFSELLEKFGSQSNTGSARSSPVLHGGSRYLESTSSGSSSRSQSPLLLSPASSHGPFIGNPAHAPHAHYSIESGIQSISIAKSSGLGLTVSGGANRPDGPMVYVQELTPDGDCYKDGRLRPGDQLIAINRDSLVGSTLEEARKIIAKAKFRHEGNTEVAFIPGRGRLHPGLSAHNSIPSPPPKAVGNGLSSCRLKVHVRSPESRHENHFPVPSLSPDICPPELTVSGRGDAFALAHRAWESSSFAESWQQPLGRSPEEPRDAAGGTRTLGRPNLVLRESTDSDTPTWGCLCHGVPTSRDARTGGARGGPTNRSTGWDGSTRQKPTWGWELSFRYRCGDSHLFFCTEGLYFPLLRFLNSECIASPAAARSPPALPPLPTGAL
SIO_010081: LOC104913467
subclass of: SO_0000673
so part of: LOC104913467
location: join(337279..337382,338148..338233,338867..338987,341035..341176,341348..341454,341870..342023,343347..343419,345437..345548,348536..348890)
location: region:337279-348890:1
so has part: feature:337279-337382:1:exon
so has part: feature:338148-338233:1:exon
so has part: feature:338867-338987:1:exon
so has part: feature:341035-341176:1:exon
so has part: feature:341348-341454:1:exon
so has part: feature:341870-342023:1:exon
so has part: feature:343347-343419:1:exon
so has part: feature:345437-345548:1:exon
so has part: feature:348536-348890:1:exon

XP_031411630.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:337279-337382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:338148-338233:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:338867-338987:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341035-341176:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:341348-341454:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:341870-342023:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:343347-343419:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:345437-345548:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:348536-348890:1:exon

LOC104913468
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 361313..369216
location: region:361313-369216:1
so has part: feature:361313-369216:1:exon
subclass of: SO_0000010

104913468
type: Gene
SIO_000068: ncbigene

position:361313:1
position: 361313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369216:1
position: 369216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361313-369216:1:exon

LOC104913468
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913468
product: syntaxin-binding protein 4-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010719733.2
SIO_010081: LOC104913468
subclass of: SO_0000673
so part of: LOC104913468
location: join(361313..361354,363942..364015,367937..368032,368758..368827,369118..369216)
location: region:361313-369216:1
so has part: feature:361313-361354:1:exon
so has part: feature:363942-364015:1:exon
so has part: feature:367937-368032:1:exon
so has part: feature:368758-368827:1:exon
so has part: feature:369118-369216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:361313-361354:1:exon

position:361354:1
position: 361354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:363942-364015:1:exon

position:363942:1
position: 363942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364015:1
position: 364015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:367937-368032:1:exon

position:367937:1
position: 367937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368032:1
position: 368032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:368758-368827:1:exon

position:368758:1
position: 368758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:368827:1
position: 368827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:369118-369216:1:exon

position:369118:1
position: 369118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913468
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913468
product: syntaxin-binding protein 4-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019620643.1
SIO_010081: LOC104913468
subclass of: SO_0000673
so part of: LOC104913468
location: join(362178..362616,363942..364015,367937..368032,368758..368827,369118..369216)
location: region:362178-369216:1
so has part: feature:362178-362616:1:exon
so has part: feature:363942-364015:1:exon
so has part: feature:367937-368032:1:exon
so has part: feature:368758-368827:1:exon
so has part: feature:369118-369216:1:exon

position:362178:1
position: 362178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362178-362616:1:exon

position:362616:1
position: 362616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:363942-364015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367937-368032:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:368758-368827:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369118-369216:1:exon

LOC104913468
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-binding protein 4-like isoform X1
translation: MPAVSVLYKGAIIISRTLMGPYGMDRTVHCFEFYDCANGLGIKVIGGIKELTGEEYGVYVKRILPGGVAYADGRLQPGDQILEVNGDSLIGVTSERAVDILRTASATSHMRLLIARDDDAR
SIO_010081: LOC104913468
subclass of: SO_0000673
so part of: LOC104913468
location: join(362570..362616,363942..364015,367937..368032,368758..368827,369118..369196)
location: region:362570-369196:1
so has part: feature:362570-362616:1:exon
so has part: feature:363942-364015:1:exon
so has part: feature:367937-368032:1:exon
so has part: feature:368758-368827:1:exon
so has part: feature:369118-369196:1:exon

XP_019476188.1
type: Protein
SIO_000068: ncbiprotein

position:362570:1
position: 362570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369196:1
position: 369196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362570-362616:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:363942-364015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:367937-368032:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:368758-368827:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:369118-369196:1:exon

LOC104913468
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913468
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-binding protein 4-like isoform X2
translation: MGPYGMDRTVHCFEFYDCANGLGIKVIGGIKELTGEEYGVYVKRILPGGVAYADGRLQPGDQILEVNGDSLIGVTSERAVDILRTASATSHMRLLIARDDDAR
SIO_010081: LOC104913468
subclass of: SO_0000673
so part of: LOC104913468
location: join(363949..364015,367937..368032,368758..368827,369118..369196)
location: region:363949-369196:1
so has part: feature:363949-364015:1:exon
so has part: feature:367937-368032:1:exon
so has part: feature:368758-368827:1:exon
so has part: feature:369118-369196:1:exon

XP_010718035.1
type: Protein
SIO_000068: ncbiprotein

position:363949:1
position: 363949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363949-364015:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:367937-368032:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:368758-368827:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369118-369196:1:exon

LOC104913469
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(371197..374614)
location: region:371197-374614:-1
so has part: feature:371197-374614:-1:exon
subclass of: SO_0000010

104913469
type: Gene
SIO_000068: ncbigene

position:371197:-1
position: 371197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374614:-1
position: 374614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371197-374614:-1:exon

LOC104913469
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913469
product: periplakin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_010719734.2
SIO_010081: LOC104913469
subclass of: SO_0000673
so part of: LOC104913469
location: complement(join(371197..371385,371607..371714,372324..372485,372566..372607,372862..372987,373537..373657,374034..374188,374396..374614))
location: region:371197-374614:-1
so has part: feature:374396-374614:-1:exon
so has part: feature:374034-374188:-1:exon
so has part: feature:373537-373657:-1:exon
so has part: feature:372862-372987:-1:exon
so has part: feature:372566-372607:-1:exon
so has part: feature:372324-372485:-1:exon
so has part: feature:371607-371714:-1:exon
so has part: feature:371197-371385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374396-374614:-1:exon

position:374396:-1
position: 374396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:374034-374188:-1:exon

position:374034:-1
position: 374034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374188:-1
position: 374188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:373537-373657:-1:exon

position:373537:-1
position: 373537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373657:-1
position: 373657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:372862-372987:-1:exon

position:372862:-1
position: 372862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372987:-1
position: 372987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:372566-372607:-1:exon

position:372566:-1
position: 372566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372607:-1
position: 372607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:372324-372485:-1:exon

position:372324:-1
position: 372324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372485:-1
position: 372485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:371607-371714:-1:exon

position:371607:-1
position: 371607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371714:-1
position: 371714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:371197-371385:-1:exon

position:371385:-1
position: 371385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913469
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: periplakin-like
translation: MWWGHGVPKGAPWDVAPLHGHLQRDELLSLFSFPSISSKELTELIERLQKNADQVEKNIVETDSRMQNDLHKIKACQLAQYKELTAQKLTESDKLLYVLDGDAAVARHMKHPQGDMITEDIRQLKERVANLRVKHDQIYNFPLQHIEPQVNWCTVIEEKQDALCGKGFGTDLPLVNSQVEEHNIFHNEVMAIGPHITKEGNKGYTSDLQAKFQKLLASSQQRQQDLNSLQDYMQRCTNKLYWLDQQAKDRTHYDWSDHNLDYPSRRRQYENFIHRKLEEKEEAINKLHADGDQLLAQNHPGKNAIEAHIEAVHADWKEYLNFLICEESHLKFMEDFHKVPDCWDWALGTETGTLKGHLVPTLR
SIO_010081: LOC104913469
subclass of: SO_0000673
so part of: LOC104913469
location: complement(join(371212..371385,371607..371714,372324..372485,372566..372607,372862..372987,373537..373657,374034..374188,374396..374599))
location: region:371212-374599:-1
so has part: feature:374396-374599:-1:exon
so has part: feature:374034-374188:-1:exon
so has part: feature:373537-373657:-1:exon
so has part: feature:372862-372987:-1:exon
so has part: feature:372566-372607:-1:exon
so has part: feature:372324-372485:-1:exon
so has part: feature:371607-371714:-1:exon
so has part: feature:371212-371385:-1:exon

XP_010718036.1
type: Protein
SIO_000068: ncbiprotein

position:371212:-1
position: 371212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374599:-1
position: 374599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:374396-374599:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:374034-374188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:373537-373657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372862-372987:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:372566-372607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:372324-372485:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371607-371714:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:371212-371385:-1:exon

LOC104913470
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(377150..380843)
location: region:377150-380843:-1
so has part: feature:377150-380843:-1:exon
subclass of: SO_0000010

104913470
type: Gene
SIO_000068: ncbigene

position:377150:-1
position: 377150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380843:-1
position: 380843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:377150-380843:-1:exon

LOC104913470
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913470
product: periplakin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019620595.1
SIO_010081: LOC104913470
subclass of: SO_0000673
so part of: LOC104913470
location: complement(join(377150..377607,378194..378291,378585..378736,379110..379256,379987..380208,380652..380843))
location: region:377150-380843:-1
so has part: feature:380652-380843:-1:exon
so has part: feature:379987-380208:-1:exon
so has part: feature:379110-379256:-1:exon
so has part: feature:378585-378736:-1:exon
so has part: feature:378194-378291:-1:exon
so has part: feature:377150-377607:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380652-380843:-1:exon

position:380652:-1
position: 380652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:379987-380208:-1:exon

position:379987:-1
position: 379987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380208:-1
position: 380208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:379110-379256:-1:exon

position:379110:-1
position: 379110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:379256:-1
position: 379256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:378585-378736:-1:exon

position:378585:-1
position: 378585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378736:-1
position: 378736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:378194-378291:-1:exon

position:378194:-1
position: 378194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378291:-1
position: 378291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:377150-377607:-1:exon

position:377607:-1
position: 377607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913470
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913470
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: periplakin-like
translation: MATATAHQRSWHSSHGIGAALPQLHTHMRFPAASRKAREDAGNGTAPPDLEVFAANDTSSRYRHQFLILLYVSHPWHLAGAVPAARIPLVRDSAFLQFQKDAKDAQQLLKKVDTDLDQKYSPEFKDRYQLESLLRELDDQEKALEKYDAVVQSLQERSQHVLPLRYRRLPPPQPIPVEALCEYEGEQGQITRGAHYTLQKNSGDIWEVMDGAGGAISAPGVCFMIPPPDAEAIALADQIADSYVAVKEKTSNCKNILQQRYEGLKADSIGDAASVQGRQLLAGLEKVHSDLDKLEKAITANLRPPLEQSRAVQDSTERSKDLKVQGHRSRLIAPHRDPDPKAEVLPRGLQCGSWCAGCCWCSQSSMKAGAALPPASDQTKIPTLAVQGATSPCAQLSICSARIPCSNSPLPSPPSDP
SIO_010081: LOC104913470
subclass of: SO_0000673
so part of: LOC104913470
location: complement(join(377165..377607,378194..378291,378585..378736,379110..379256,379987..380208,380652..380843))
location: region:377165-380843:-1
so has part: feature:380652-380843:-1:exon
so has part: feature:379987-380208:-1:exon
so has part: feature:379110-379256:-1:exon
so has part: feature:378585-378736:-1:exon
so has part: feature:378194-378291:-1:exon
so has part: feature:377165-377607:-1:exon

XP_019476140.1
type: Protein
SIO_000068: ncbiprotein

position:377165:-1
position: 377165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380652-380843:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:379987-380208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:379110-379256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:378585-378736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:378194-378291:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:377165-377607:-1:exon

UBN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 380548..404970
location: region:380548-404970:1
so has part: feature:380548-404970:1:exon
subclass of: SO_0000010

100545807
type: Gene
SIO_000068: ncbigene

position:380548:1
position: 380548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:404970:1
position: 404970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380548-404970:1:exon

UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_019620661.2
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380548..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..404970)
location: region:380548-404970:1
so has part: feature:380548-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-404970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380548-381093:1:exon

position:381093:1
position: 381093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

position:382652:1
position: 382652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382735:1
position: 382735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

position:383714:1
position: 383714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383809:1
position: 383809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

position:384120:1
position: 384120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384254:1
position: 384254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

position:384943:1
position: 384943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385046:1
position: 385046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

position:386349:1
position: 386349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386787:1
position: 386787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

position:389432:1
position: 389432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389502:1
position: 389502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

position:391133:1
position: 391133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391262:1
position: 391262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

position:391482:1
position: 391482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391600:1
position: 391600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:393168-393311:1:exon

position:393168:1
position: 393168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393311:1
position: 393311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:396214-396264:1:exon

position:396214:1
position: 396214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:396264:1
position: 396264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:397414-397456:1:exon

position:397414:1
position: 397414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397456:1
position: 397456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:397782-399011:1:exon

position:397782:1
position: 397782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:399011:1
position: 399011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:400332-400584:1:exon

position:400332:1
position: 400332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400584:1
position: 400584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:400900-400989:1:exon

position:400900:1
position: 400900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:400989:1
position: 400989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:403263-404970:1:exon

position:403263:1
position: 403263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019620665.2
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380548..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..404970)
location: region:380548-404970:1
so has part: feature:380548-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-404970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380548-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403263-404970:1:exon

UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031555802.1
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380548..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,397414..397456,397782..399011,400332..400584,400900..400989,403263..404970)
location: region:380548-404970:1
so has part: feature:380548-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-404970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380548-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:403263-404970:1:exon

UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031555800.1
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380548..381093,382652..382735,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..404970)
location: region:380548-404970:1
so has part: feature:380548-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:384120-384254:1:exon
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UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019620659.2
SIO_010081: UBN1
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UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019620663.2
SIO_010081: UBN1
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UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031555801.1
SIO_010081: UBN1
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UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019620658.2
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
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UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_019620662.2
SIO_010081: UBN1
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UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_019620664.2
SIO_010081: UBN1
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UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019620660.2
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380551..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,403263..404970)
location: region:380551-404970:1
so has part: feature:380551-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:403263-404970:1:exon

position:380551:1
position: 380551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380551-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-404970:1:exon

UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_003210787.4
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380552..381078,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..404970)
location: region:380552-404970:1
so has part: feature:380552-381078:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-404970:1:exon

position:380552:1
position: 380552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380552-381078:1:exon

position:381078:1
position: 381078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:403263-404970:1:exon

UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_010719314.3
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380553..381078,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,403263..404970)
location: region:380553-404970:1
so has part: feature:380553-381078:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:403263-404970:1:exon

position:380553:1
position: 380553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380553-381078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-404970:1:exon

UBN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBN1
product: ubinuclein 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_010719315.3
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381078,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..404970)
location: region:380842-404970:1
so has part: feature:380842-381078:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-404970:1:exon

position:380842:1
position: 380842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-404970:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X1
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKMLEEEKDKEQRDRVCSDDDEDDEKGGKRVTGPRKKFQWNDEIRELLCHLVKIKLDGYEYDKNKAQSLEDYVKTFLDGEVKPLWPKGWMQARTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHSLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_019476203.1
type: Protein
SIO_000068: ncbiprotein

position:403315:1
position: 403315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X4
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKMLEEEKDKEQRDRVCSDDDEDDEKGGKRVTGPRKKFQWNDEIRELLCHLVKIKLDGYEYDKNKAQSLEDYVKTFLDGEVKPLWPKGWMQARTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHNASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:403263-403315:1:exon

XP_019476205.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X8
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKMLEEEKDKEQRDRVCSDDDEDDEKGGKRVTGPRKKFQWNDEIRELLCHLVKIKLDGYEYDKNKAQSLEDYVKTFLDGEVKPLWPKGWMQARTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400446,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400446:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_019476207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400332-400446:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X12
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKMLEEEKDKEQRDRVCSDDDEDDEKGGKRVTGPRKKFQWNDEIRELLCHLVKIKLDGYEYDKNKAQSLEDYVKTFLDGEVKPLWPKGWMQARTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400446,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400446:1:exon
so has part: feature:403263-403315:1:exon

XP_019476209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400332-400446:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X3
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKMLEEEKDKEQRDRVCSDDDEDDEKGGKRVTGPRKKFQWNDEIRELLCHLVKIKLDGYEYDKNKAQSLEDYVKTFLDGEVKPLWPKGWMQARAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHSLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,397414..397456,397782..399011,400332..400584,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_019476204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X10
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKMLEEEKDKEQRDRVCSDDDEDDEKGGKRVTGPRKKFQWNDEIRTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHSLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_019476208.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X11
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKMLEEEKDKEQRDRVCSDDDEDDEKGGKRVTGPRKKFQWNDEIRAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHSLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,397414..397456,397782..399011,400332..400584,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_031411661.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X7
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKELLCHLVKIKLDGYEYDKNKAQSLEDYVKTFLDGEVKPLWPKGWMQARTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHSLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_019476206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X13
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHSLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_019476210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X14
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHSLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,397414..397456,397782..399011,400332..400584,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_031411662.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X5
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKVSILVRKEPADPFDDEKERHKAEALARKFEEKYYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKMLEEEKDKEQRDRVCSDDDEDDEKGGKRVTGPRKKFQWNDEIRELLCHLVKIKLDGYEYDKNKAQSLEDYVKTFLDGEVKPLWPKGWMQARTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHSLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381093,382652..382735,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381093:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_031411660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381093:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X2
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKMLEEEKDKEQRDRVCSDDDEDDEKGGKRVTGPRKKFQWNDEIRELLCHLVKIKLDGYEYDKNKAQSLEDYVKTFLDGEVKPLWPKGWMQARTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHSLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381078,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381078:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_003210835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X6
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKMLEEEKDKEQRDRVCSDDDEDDEKGGKRVTGPRKKFQWNDEIRELLCHLVKIKLDGYEYDKNKAQSLEDYVKTFLDGEVKPLWPKGWMQARTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHNASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381078,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,392082..392210,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381078:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:392082-392210:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:403263-403315:1:exon

XP_010717616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:392082-392210:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-403315:1:exon

UBN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubinuclein-1 isoform X9
translation: MTEPHRVLFTTLHGPLSSSFLKKPRKDDAEQPPEAEQPGETVRLSLTLFEPDHKRCPEFYYPDLLKNSQAKRKGSSGDKRKEPADPFDDEKERHKAEALARKFEEKYGGKRRRKDRFQDLIDMGYGYDESDSFIDNSEAYDELVPASLTTKYGGFYINTGTLQFRQASDSEDEYVKEKKKKSPKKRKLKDGSEKMKKRKKDDSYDKEKKSKKSKFPKAGFTALNASKEKKKKKYSGALSVKEMLRKFQKEKEAQKKKDEEQKAVTPSPAEPQAPREAETMPDPLLSLFGHASDSDLLQAATAMDTLTDLDLERLFGESPEGSPLHDVEDGSNPSGAGLEQDFKQLPSLPEGLPAPLEKRIKELAQAARAAEGEGKQKFFTQDINNIILDIELQTRELNSQIRSGVYTHLAAFLPCSKDTLVKRARKLYLYEQGGRLKEPLQKLKEAIGRAMPEQMAKYQEECQAHTQAKFVKELLCHLVKIKLDGYEYDKNKAQSLEDYVKTFLDGEVKPLWPKGWMQARTLFKESRRVHGHLTSVLAKKKVVAPTKVKGKELSSKPDKKVAVSVPSVHSSNTVALSSEPQAGGLNISAQTRELLSLGTAQAANSTATPAAFMDNSLDEDLIHNPTSSLEAVSKELAVLNSRAGGSPDFPLPGAPKAPPEKIPTLASSEEKRTFPKAHPAPATSSAGSLQSPLNFLAEQALALGQSSQDKKTENSNYKELSCQASPSKILPDMHQAKQKHHSLVRPSHGPQTSTSVPGTQVKVFHSSNQPQKTFTSPAPFVKLQNPKSSSPLPQRSLLQQVKSSTKAQSFHSSATSGSTQNSSSSHKSPGSSSSSLNYTGKHSSGSSTSGQSYKSPFVSGSLSKHGTSSSSSSSGASANQGCSSGNLLPSMQTPSSSQASSRPALGSAVKKTPVSQKLTLVAPPGGSNGDSSGGTQGVAKLLTSSLKPAVASSAPSSTSVPKGTSGAVLLTSSSSLSVLSPSYKSSNPKLPAALSSTPLGIISPIHTFPLHVISFTSDSSPKAGVSKDAIVTGPAPGTFHHGLGHSLLAGLHSSPHHAAPLPHSALSTHLPQSLPDASQLHGKGSNTQQRKL
SIO_010081: UBN1
subclass of: SO_0000673
so part of: UBN1
location: join(380842..381078,382652..382735,383714..383809,384120..384254,384943..385046,386349..386787,389432..389502,391133..391262,391482..391600,393168..393311,396214..396264,397414..397456,397782..399011,400332..400584,400900..400989,403263..403315)
location: region:380842-403315:1
so has part: feature:380842-381078:1:exon
so has part: feature:382652-382735:1:exon
so has part: feature:383714-383809:1:exon
so has part: feature:384120-384254:1:exon
so has part: feature:384943-385046:1:exon
so has part: feature:386349-386787:1:exon
so has part: feature:389432-389502:1:exon
so has part: feature:391133-391262:1:exon
so has part: feature:391482-391600:1:exon
so has part: feature:393168-393311:1:exon
so has part: feature:396214-396264:1:exon
so has part: feature:397414-397456:1:exon
so has part: feature:397782-399011:1:exon
so has part: feature:400332-400584:1:exon
so has part: feature:400900-400989:1:exon
so has part: feature:403263-403315:1:exon

XP_010717617.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:380842-381078:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:382652-382735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:383714-383809:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:384120-384254:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:384943-385046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:386349-386787:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:389432-389502:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:391133-391262:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:391482-391600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:393168-393311:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:396214-396264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:397414-397456:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:397782-399011:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:400332-400584:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:400900-400989:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:403263-403315:1:exon

PPL
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(406600..>414173)
location: region:406600-414173:-1
so has part: feature:406600-414173:-1:exon
subclass of: SO_0000010

100547953
type: Gene
SIO_000068: ncbigene

position:406600:-1
position: 406600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414173:-1
position: 414173
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:406600-414173:-1:exon

PPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PPL
product: periplakin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 73 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
transcript id: XM_010719323.2
SIO_010081: PPL
subclass of: SO_0000673
so part of: PPL
location: complement(join(406600..410188,410817..410909,411588..411704,412100..412183,412480..412630,413225..413418,413711..413849,413998..>414173))
location: region:406600-414173:-1
so has part: feature:413998-414173:-1:exon
so has part: feature:413711-413849:-1:exon
so has part: feature:413225-413418:-1:exon
so has part: feature:412480-412630:-1:exon
so has part: feature:412100-412183:-1:exon
so has part: feature:411588-411704:-1:exon
so has part: feature:410817-410909:-1:exon
so has part: feature:406600-410188:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413998-414173:-1:exon

position:413998:-1
position: 413998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:413711-413849:-1:exon

position:413711:-1
position: 413711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413849:-1
position: 413849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:413225-413418:-1:exon

position:413225:-1
position: 413225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413418:-1
position: 413418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:412480-412630:-1:exon

position:412480:-1
position: 412480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412630:-1
position: 412630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:412100-412183:-1:exon

position:412100:-1
position: 412100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:412183:-1
position: 412183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:411588-411704:-1:exon

position:411588:-1
position: 411588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:411704:-1
position: 411704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:410817-410909:-1:exon

position:410817:-1
position: 410817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410909:-1
position: 410909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:406600-410188:-1:exon

position:410188:-1
position: 410188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: periplakin
translation: ITNEVRRIEPEKMRKVQDCEAFIESVPNTGSATLVKNKVENTNKKYDRVVQLLSAAQEKVEVATHLEKSLQQGRDLLSTYENKLVTDDTVPEDLRVIDRKKEELLAMGSELQSKRFLLNEAEQNLLRTKTCSNTLASKFQEHCPDIERQEAELYKLNQRFNNLSKQIDHRTQTLQKAKSAYSNYRTNYDKINQFLCNIPNYEPQETDNIQQVEVKLKNQTALLGDIASKEQEVQKVSATAQQYQQAVKDYELEAEKLRSILDLENGRNGYISKKPRLQSPAAKVKEEEAILAAKFTEVNAVNRQRLQNLEFAQSLLRQQPEVQVTQDFIQTKKSVRPVEEVWKLKKELEDETQRRQQLEAEIQAIQNNIVQLQNQKPQETVVKKELVKKVPDPQLEESFHKLQQSLAEEQRKNQVLQDELEALKIRLRVLEHEKKEGGQEYIVKEVLRIEQDKAQAEEILRLKEELEELRRQEGTRENEVILLRQQIAVLSSEKNKEQEKVTEKEVLKLQNDPQLEMEFRMLQENKQRESALRQKYEEELSFLQEKLKRLEKERAIAEGKITVKEVLKVEKDVAIEREVNELRRQYEDEKSRGRSNEREKAELLRKIQLLEEENAKVVVQEKVREIVRPDPKAENEVANLRLELVEQERRYRGGDEQLKSCQNELAALRNREPLVEVKEVIKEVIKYKNDPETEKELQRLREEIIERTGAIERADLEIYQLKQEIQALKDTKPQVHTKEVVQEILQFREDPKTREEVESLRVQLAEEQMKHVDLERERLLQEEKVRQKEEELSQVKEKVVQQEVVKYEQDPALKAEVNSFSQSIESELKQIDSLREELRKLQRRRSELERQLEELEKERQARREAELEVQRLRIRLNELEEQERETTERVTVKQKVILQQDPQQEKEHSLLRLELEEEKHRRQVLQTELEALRKKLLSLEKMEVKEKVVFSESVQVDKGDTEYEIQKLKSNLEEESRRKRELDADINRLETRLSEVEFNNSKSSKELDLLREENHKLHLEKQNLLMETRRLQSEIELTATEARDLRNMTHADSGPNLDSRFQALERELDDLKQLSREKDAEIEQLQNRLKTVAIKREQRENHLRRSIVVIDPDTGKEMSPEEAHVLGLIEWSLFVKLKSQECDWEEISIKGPNGESSVILDRKSGREFSIENALKSGRLSTTQYNSYLNKQMSIQELAVLVSGSDYPVLAPL
SIO_010081: PPL
subclass of: SO_0000673
so part of: PPL
location: complement(join(407504..410188,410817..410909,411588..411704,412100..412183,412480..412630,413225..413418,413711..413849,413998..>414173))
location: region:407504-414173:-1
so has part: feature:413998-414173:-1:exon
so has part: feature:413711-413849:-1:exon
so has part: feature:413225-413418:-1:exon
so has part: feature:412480-412630:-1:exon
so has part: feature:412100-412183:-1:exon
so has part: feature:411588-411704:-1:exon
so has part: feature:410817-410909:-1:exon
so has part: feature:407504-410188:-1:exon

XP_010717625.1
type: Protein
SIO_000068: ncbiprotein

position:407504:-1
position: 407504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413998-414173:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413711-413849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:413225-413418:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:412480-412630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:412100-412183:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:411588-411704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:410817-410909:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:407504-410188:-1:exon

NME3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NME3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <414327..416158
location: region:414327-416158:1
so has part: feature:414327-416158:1:exon
subclass of: SO_0000010

100547803
type: Gene
SIO_000068: ncbigene

position:414327:1
position: 414327
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:416158:1
position: 416158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414327-416158:1:exon

NME3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NME3
product: NME/NM23 nucleoside diphosphate kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_031555811.1
SIO_010081: NME3
subclass of: SO_0000673
so part of: NME3
location: join(<414327..414488,414583..414684,414811..414923,415765..416158)
location: region:414327-416158:1
so has part: feature:414327-414488:1:exon
so has part: feature:414583-414684:1:exon
so has part: feature:414811-414923:1:exon
so has part: feature:415765-416158:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:414327-414488:1:exon

position:414488:1
position: 414488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:414583-414684:1:exon

position:414583:1
position: 414583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414684:1
position: 414684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:414811-414923:1:exon

position:414811:1
position: 414811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:414923:1
position: 414923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:415765-416158:1:exon

position:415765:1
position: 415765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NME3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NME3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoside diphosphate kinase 3
translation: SPPPDTRALTARSGVSERTFIAIKPDGVQRHLVGEIVRRFERKGFKLVGLKLLQASEELLKEHYIDLRDRPFYGRLVKYMSSGPVVAMVWQGLDVVRMARTMIGETNPAESKPGTIRGDFCIEVGKNVIHGSDSVESAQKEISLWFHPEELMCWEDAAERWIYE
SIO_010081: NME3
subclass of: SO_0000673
so part of: NME3
location: join(<414327..414488,414583..414684,414811..414923,415765..415882)
location: region:414327-415882:1
so has part: feature:414327-414488:1:exon
so has part: feature:414583-414684:1:exon
so has part: feature:414811-414923:1:exon
so has part: feature:415765-415882:1:exon

XP_031411671.1
type: Protein
SIO_000068: ncbiprotein

position:415882:1
position: 415882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:414327-414488:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:414583-414684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:414811-414923:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:415765-415882:1:exon

SPSB3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SPSB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 420968..427972
location: region:420968-427972:1
so has part: feature:420968-427972:1:exon
subclass of: SO_0000010

100545498
type: Gene
SIO_000068: ncbigene

position:420968:1
position: 420968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427972:1
position: 427972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:420968-427972:1:exon

SPSB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SPSB3
product: splA/ryanodine receptor domain and SOCS box containing 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_010719326.3
SIO_010081: SPSB3
subclass of: SO_0000673
so part of: SPSB3
location: join(420968..421314,421858..422006,424055..424232,425001..425188,425886..425988,426528..426653,426943..427972)
location: region:420968-427972:1
so has part: feature:420968-421314:1:exon
so has part: feature:421858-422006:1:exon
so has part: feature:424055-424232:1:exon
so has part: feature:425001-425188:1:exon
so has part: feature:425886-425988:1:exon
so has part: feature:426528-426653:1:exon
so has part: feature:426943-427972:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:420968-421314:1:exon

position:421314:1
position: 421314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:421858-422006:1:exon

position:421858:1
position: 421858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422006:1
position: 422006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:424055-424232:1:exon

position:424055:1
position: 424055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424232:1
position: 424232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:425001-425188:1:exon

position:425001:1
position: 425001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425188:1
position: 425188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:425886-425988:1:exon

position:425886:1
position: 425886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425988:1
position: 425988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:426528-426653:1:exon

position:426528:1
position: 426528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426653:1
position: 426653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:426943-427972:1:exon

position:426943:1
position: 426943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPSB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SPSB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPRY domain-containing SOCS box protein 3
translation: MARRTRSSRAWHFVLSGVRREADSRALALATGARGWGYDSDGQHSDSDSEPEFSTLSPSIPSAIPVTGESYCNCENQSEAPYCSSLHALHRVKDCQCGEEDEYFDWVWDDLNKSTATLLTCDNRKVNFHMEYSCGTAAIRGNKELAEGQHFWEIKMTSPVYGTDMMVGIGTSDVNLDKYRHTFCSLLGKDEDSWGLSYTGLLHHKGDKTNFSSRFGQGSIIGVHLDTWHGTLTFFKNRKCIGVAATKLQNKKFYPMVCSTAAKSSMKVIRSCASCTSLQYLCCYRLRQLLPDYVDTLEVLPLPPGLKQVLHNKLGWVLSMNYSTSKPSSSSSGSDSDSSCGSDAEACQRKRCRRT
SIO_010081: SPSB3
subclass of: SO_0000673
so part of: SPSB3
location: join(421878..422006,424055..424232,425001..425188,425886..425988,426528..426653,426943..427286)
location: region:421878-427286:1
so has part: feature:421878-422006:1:exon
so has part: feature:424055-424232:1:exon
so has part: feature:425001-425188:1:exon
so has part: feature:425886-425988:1:exon
so has part: feature:426528-426653:1:exon
so has part: feature:426943-427286:1:exon

XP_010717628.1
type: Protein
SIO_000068: ncbiprotein

position:421878:1
position: 421878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427286:1
position: 427286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:421878-422006:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424055-424232:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:425001-425188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:425886-425988:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:426528-426653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:426943-427286:1:exon

EME2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: EME2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(428058..434932)
location: region:428058-434932:-1
so has part: feature:428058-434932:-1:exon
subclass of: SO_0000010

100545654
type: Gene
SIO_000068: ncbigene

position:428058:-1
position: 428058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434932:-1
position: 434932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:428058-434932:-1:exon

EME2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EME2
product: essential meiotic structure-specific endonuclease subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_019620676.2
SIO_010081: EME2
subclass of: SO_0000673
so part of: EME2
location: complement(join(428058..428202,431460..431649,432026..432141,432888..432993,433968..434089,434815..434932))
location: region:428058-434932:-1
so has part: feature:434815-434932:-1:exon
so has part: feature:433968-434089:-1:exon
so has part: feature:432888-432993:-1:exon
so has part: feature:432026-432141:-1:exon
so has part: feature:431460-431649:-1:exon
so has part: feature:428058-428202:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:434815-434932:-1:exon

position:434815:-1
position: 434815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433968-434089:-1:exon

position:433968:-1
position: 433968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434089:-1
position: 434089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:432888-432993:-1:exon

position:432888:-1
position: 432888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432993:-1
position: 432993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:432026-432141:-1:exon

position:432026:-1
position: 432026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432141:-1
position: 432141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:431460-431649:-1:exon

position:431460:-1
position: 431460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:431649:-1
position: 431649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:428058-428202:-1:exon

position:428202:-1
position: 428202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EME2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EME2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable crossover junction endonuclease EME2 isoform X2
translation: MVKTEEEKEVLVVLEPADFLKRLYSLTQTFGDASSGSQPDLNQVLPLASLEGSSTKTYSLAVVGLDAYRCNQEQNGWQALSPGKQSPKFQPGPELFMTQEEILEAQVVLQLWGNIDVQLLDTWQEFGEHISALTKAIARRPYKSQLEMQELSFCTAGVSGKGLRVEKDGTGLWQVWKRQIQQFNRVSPATAAAIAEAYPSPGLLVQPQASAWRCWSSIQAWL
SIO_010081: EME2
subclass of: SO_0000673
so part of: EME2
location: complement(join(428152..428202,431460..431649,432026..432141,432888..432993,433968..434089,434815..434898))
location: region:428152-434898:-1
so has part: feature:434815-434898:-1:exon
so has part: feature:433968-434089:-1:exon
so has part: feature:432888-432993:-1:exon
so has part: feature:432026-432141:-1:exon
so has part: feature:431460-431649:-1:exon
so has part: feature:428152-428202:-1:exon

XP_019476221.1
type: Protein
SIO_000068: ncbiprotein

position:428152:-1
position: 428152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434898:-1
position: 434898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434815-434898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433968-434089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432888-432993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432026-432141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431460-431649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:428152-428202:-1:exon

EME2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EME2
product: essential meiotic structure-specific endonuclease subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 215 samples with support for all annotated introns
transcript id: XM_003210786.4
SIO_010081: EME2
subclass of: SO_0000673
so part of: EME2
location: complement(join(430057..430401,431460..431649,432026..432141,432888..432993,433968..434089,434815..434930))
location: region:430057-434930:-1
so has part: feature:434815-434930:-1:exon
so has part: feature:433968-434089:-1:exon
so has part: feature:432888-432993:-1:exon
so has part: feature:432026-432141:-1:exon
so has part: feature:431460-431649:-1:exon
so has part: feature:430057-430401:-1:exon

position:430057:-1
position: 430057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434930:-1
position: 434930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434815-434930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433968-434089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432888-432993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432026-432141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431460-431649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430057-430401:-1:exon

position:430401:-1
position: 430401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EME2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EME2
product: essential meiotic structure-specific endonuclease subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010719324.3
SIO_010081: EME2
subclass of: SO_0000673
so part of: EME2
location: complement(join(430057..430401,431460..431649,432026..432141,432888..432993,433095..433238,433968..434089,434331..434425,434815..434907))
location: region:430057-434907:-1
so has part: feature:434815-434907:-1:exon
so has part: feature:434331-434425:-1:exon
so has part: feature:433968-434089:-1:exon
so has part: feature:433095-433238:-1:exon
so has part: feature:432888-432993:-1:exon
so has part: feature:432026-432141:-1:exon
so has part: feature:431460-431649:-1:exon
so has part: feature:430057-430401:-1:exon

position:434907:-1
position: 434907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434815-434907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:434331-434425:-1:exon

position:434331:-1
position: 434331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434425:-1
position: 434425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:433968-434089:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:433095-433238:-1:exon

position:433095:-1
position: 433095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433238:-1
position: 433238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:432888-432993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:432026-432141:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:431460-431649:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:430057-430401:-1:exon

EME2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EME2
product: essential meiotic structure-specific endonuclease subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_010719325.3
SIO_010081: EME2
subclass of: SO_0000673
so part of: EME2
location: complement(join(430057..430401,431460..431649,432026..432141,432888..432993,433095..433238,433338..433955))
location: region:430057-433955:-1
so has part: feature:433338-433955:-1:exon
so has part: feature:433095-433238:-1:exon
so has part: feature:432888-432993:-1:exon
so has part: feature:432026-432141:-1:exon
so has part: feature:431460-431649:-1:exon
so has part: feature:430057-430401:-1:exon

position:433955:-1
position: 433955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433338-433955:-1:exon

position:433338:-1
position: 433338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433095-433238:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432888-432993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432026-432141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431460-431649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430057-430401:-1:exon

EME2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EME2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable crossover junction endonuclease EME2 isoform X1
translation: MVKTEEEKEVLVVLEPADFLKRLYSLTQTFGDASSGSQPDLNQVLPLASLEGSSTKTYSLAVVGLDAYRCNQEQNGWQALSPGKQSPKFQPGPELFMTQEEILEAQVVLQLWGNIDVQLLDTWQEFGEHISALTKAIARRPYKSQLEMQELSFCTAGVSGKGLRVEKDGTGLWQVWKRQIQQFNRVSPATAAAIAEAYPSPGLLVQAYEECSTEDEKLLLLSNIPVKSDISGKDHRVGPDVSRRIYLFMVSTNPDLILDLTA
SIO_010081: EME2
subclass of: SO_0000673
so part of: EME2
location: complement(join(430231..430401,431460..431649,432026..432141,432888..432993,433968..434089,434815..434898))
location: region:430231-434898:-1
so has part: feature:434815-434898:-1:exon
so has part: feature:433968-434089:-1:exon
so has part: feature:432888-432993:-1:exon
so has part: feature:432026-432141:-1:exon
so has part: feature:431460-431649:-1:exon
so has part: feature:430231-430401:-1:exon

XP_003210834.2
type: Protein
SIO_000068: ncbiprotein

position:430231:-1
position: 430231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:434815-434898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433968-434089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432888-432993:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:432026-432141:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:431460-431649:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:430231-430401:-1:exon

EME2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EME2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable crossover junction endonuclease EME2 isoform X3
translation: MQNCSSVPAVAVLPHQGALCPPSSLTERCNQEQNGWQALSPGKQSPKFQPGPELFMTQEEILEAQVVLQLWGNIDVQLLDTWQEFGEHISALTKAIARRPYKSQLEMQELSFCTAGVSGKGLRVEKDGTGLWQVWKRQIQQFNRVSPATAAAIAEAYPSPGLLVQAYEECSTEDEKLLLLSNIPVKSDISGKDHRVGPDVSRRIYLFMVSTNPDLILDLTA
SIO_010081: EME2
subclass of: SO_0000673
so part of: EME2
location: complement(join(430231..430401,431460..431649,432026..432141,432888..432993,433095..433177))
location: region:430231-433177:-1
so has part: feature:433095-433177:-1:exon
so has part: feature:432888-432993:-1:exon
so has part: feature:432026-432141:-1:exon
so has part: feature:431460-431649:-1:exon
so has part: feature:430231-430401:-1:exon

XP_010717626.1
type: Protein
SIO_000068: ncbiprotein

position:433177:-1
position: 433177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:433095-433177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432888-432993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432026-432141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431460-431649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:430231-430401:-1:exon

EME2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EME2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable crossover junction endonuclease EME2 isoform X3
translation: MQNCSSVPAVAVLPHQGALCPPSSLTERCNQEQNGWQALSPGKQSPKFQPGPELFMTQEEILEAQVVLQLWGNIDVQLLDTWQEFGEHISALTKAIARRPYKSQLEMQELSFCTAGVSGKGLRVEKDGTGLWQVWKRQIQQFNRVSPATAAAIAEAYPSPGLLVQAYEECSTEDEKLLLLSNIPVKSDISGKDHRVGPDVSRRIYLFMVSTNPDLILDLTA
SIO_010081: EME2
subclass of: SO_0000673
so part of: EME2
location: complement(join(430231..430401,431460..431649,432026..432141,432888..432993,433095..433177))
location: region:430231-433177:-1
so has part: feature:433095-433177:-1:exon
so has part: feature:432888-432993:-1:exon
so has part: feature:432026-432141:-1:exon
so has part: feature:431460-431649:-1:exon
so has part: feature:430231-430401:-1:exon

XP_010717627.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:433095-433177:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:432888-432993:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:432026-432141:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:431460-431649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:430231-430401:-1:exon

IGFALS
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: IGFALS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 436853..439799
location: region:436853-439799:1
so has part: feature:436853-439799:1:exon
subclass of: SO_0000010

100547647
type: Gene
SIO_000068: ncbigene

position:436853:1
position: 436853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439799:1
position: 439799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436853-439799:1:exon

IGFALS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: IGFALS
product: insulin like growth factor binding protein acid labile subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_010719327.2
SIO_010081: IGFALS
subclass of: SO_0000673
so part of: IGFALS
location: join(436853..436873,437433..439799)
location: region:436853-439799:1
so has part: feature:436853-436873:1:exon
so has part: feature:437433-439799:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:436853-436873:1:exon

position:436873:1
position: 436873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:437433-439799:1:exon

position:437433:1
position: 437433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IGFALS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: IGFALS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: insulin-like growth factor-binding protein complex acid labile subunit
translation: MSADRAGRVPLLLPLVLLLAAASQPQDGDVPKEPPATEPLRCPSPCACSLDDYSEELNVFCSGRNLTQLPEDIPTNAKALWLDGNNFTQLPAAAFRNLSGLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNFFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITNLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCLSRIRANTFSSLTSLRRLFLQHNAISIIEDQSFRELHELLELDMKHNRLSHLSPQLFVGLSNLEYLFLSFNQILDISQDTFSPLRRLFWLDLSHNQLATLDNAIITQLANLRYLSLRNNSLETFSVGFLCPSFTLEQLWLGGNNWHCNCSLKGLRDFALRHPSVVPRFVQSVAEGDDSHVPVYTYNNLTCLQPPSLTGLDLRDTSEDNFAHC
SIO_010081: IGFALS
subclass of: SO_0000673
so part of: IGFALS
location: join(436858..436873,437433..439249)
location: region:436858-439249:1
so has part: feature:436858-436873:1:exon
so has part: feature:437433-439249:1:exon

XP_010717629.1
type: Protein
SIO_000068: ncbiprotein

position:436858:1
position: 436858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439249:1
position: 439249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436858-436873:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:437433-439249:1:exon

NUBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NUBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(440809..444599)
location: region:440809-444599:-1
so has part: feature:440809-444599:-1:exon
subclass of: SO_0000010

100545342
type: Gene
SIO_000068: ncbigene

position:440809:-1
position: 440809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444599:-1
position: 444599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440809-444599:-1:exon

NUBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NUBP2
product: nucleotide binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_019620677.2
SIO_010081: NUBP2
subclass of: SO_0000673
so part of: NUBP2
location: complement(join(440809..441834,442379..442448,442786..442896,443178..443332,443482..443680,444329..444599))
location: region:440809-444599:-1
so has part: feature:444329-444599:-1:exon
so has part: feature:443482-443680:-1:exon
so has part: feature:443178-443332:-1:exon
so has part: feature:442786-442896:-1:exon
so has part: feature:442379-442448:-1:exon
so has part: feature:440809-441834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:444329-444599:-1:exon

position:444329:-1
position: 444329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:443482-443680:-1:exon

position:443482:-1
position: 443482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443680:-1
position: 443680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:443178-443332:-1:exon

position:443178:-1
position: 443178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443332:-1
position: 443332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:442786-442896:-1:exon

position:442786:-1
position: 442786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442896:-1
position: 442896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:442379-442448:-1:exon

position:442379:-1
position: 442379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442448:-1
position: 442448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:440809-441834:-1:exon

position:441834:-1
position: 441834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NUBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NUBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic Fe-S cluster assembly factor NUBP2
translation: MFKVQDNDVHQCDAGWVPVFVDQEKSISLMSIGFLLEKPDDAVVWRGPKKNALIKQFVADVAWGELDFLIVDTPPGTSDEHISTVEALRPYKPLGAILVTTPQAVAVGDVRRELTFCKKTGLRVLGIVENMSGFVCPHCSECTNIFSKGGGEELAKHAGVPFLGSVPLDPQLSQSLEEGRDFIQEFPKSSAFPALTRIAQQILDGALQQSS
SIO_010081: NUBP2
subclass of: SO_0000673
so part of: NUBP2
location: complement(join(441689..441834,442379..442448,442786..442896,443178..443332,443482..443635))
location: region:441689-443635:-1
so has part: feature:443482-443635:-1:exon
so has part: feature:443178-443332:-1:exon
so has part: feature:442786-442896:-1:exon
so has part: feature:442379-442448:-1:exon
so has part: feature:441689-441834:-1:exon

XP_019476222.1
type: Protein
SIO_000068: ncbiprotein

position:441689:-1
position: 441689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443635:-1
position: 443635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:443482-443635:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:443178-443332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:442786-442896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:442379-442448:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441689-441834:-1:exon

METRN
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: METRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 445182..447586
location: region:445182-447586:1
so has part: feature:445182-447586:1:exon
subclass of: SO_0000010

104913471
type: Gene
SIO_000068: ncbigene

position:445182:1
position: 445182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:447586:1
position: 447586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445182-447586:1:exon

METRN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: METRN
product: meteorin, glial cell differentiation regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010719736.3
SIO_010081: METRN
subclass of: SO_0000673
so part of: METRN
location: join(445182..445230,445405..445554,445664..445723,446532..447586)
location: region:445182-447586:1
so has part: feature:445182-445230:1:exon
so has part: feature:445405-445554:1:exon
so has part: feature:445664-445723:1:exon
so has part: feature:446532-447586:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445182-445230:1:exon

position:445230:1
position: 445230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:445405-445554:1:exon

position:445405:1
position: 445405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445554:1
position: 445554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:445664-445723:1:exon

position:445664:1
position: 445664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:445723:1
position: 445723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:446532-447586:1:exon

position:446532:1
position: 446532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METRN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: METRN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meteorin
translation: MEPAPSTADLIRASTEARVRCFSWPPHEQVALFLQATPQRDISRRIAAFRYELRGDWLARPALPAEGVCRPCNDTELLMAICTSDFVVRGTIHSVSNDAELQESVIGVSAVRIHRQKFPLFQTGGRPGRAAGSIRTPLRCGVRPGPGTFLFTGWLHFGEAWLSCAPRYKDFQRIYEGARRRRQNPCEFPVD
SIO_010081: METRN
subclass of: SO_0000673
so part of: METRN
location: join(445182..445230,445405..445554,445664..445723,446532..446848)
location: region:445182-446848:1
so has part: feature:445182-445230:1:exon
so has part: feature:445405-445554:1:exon
so has part: feature:445664-445723:1:exon
so has part: feature:446532-446848:1:exon

XP_010718038.1
type: Protein
SIO_000068: ncbiprotein

position:446848:1
position: 446848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445182-445230:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:445405-445554:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:445664-445723:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:446532-446848:1:exon

ANTKMT
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ANTKMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 450882..452803
location: region:450882-452803:1
so has part: feature:450882-452803:1:exon
subclass of: SO_0000010

100547340
type: Gene
SIO_000068: ncbigene

position:450882:1
position: 450882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452803:1
position: 452803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450882-452803:1:exon

ANTKMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ANTKMT
product: adenine nucleotide translocase lysine methyltransferase
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010719328.3
SIO_010081: ANTKMT
subclass of: SO_0000673
so part of: ANTKMT
location: join(450882..451073,451164..451267,451667..451807,452024..452074,452373..452803)
location: region:450882-452803:1
so has part: feature:450882-451073:1:exon
so has part: feature:451164-451267:1:exon
so has part: feature:451667-451807:1:exon
so has part: feature:452024-452074:1:exon
so has part: feature:452373-452803:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:450882-451073:1:exon

position:451073:1
position: 451073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:451164-451267:1:exon

position:451164:1
position: 451164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451267:1
position: 451267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:451667-451807:1:exon

position:451667:1
position: 451667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451807:1
position: 451807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:452024-452074:1:exon

position:452024:1
position: 452024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452074:1
position: 452074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:452373-452803:1:exon

position:452373:1
position: 452373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANTKMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ANTKMT
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: adenine nucleotide translocase lysine N-methyltransferase
translation: MDAEALDELAGQLQGEALGGRGLLQLAATTGLAAYAVWAAVLMPGFRRVPLHLQVPYVPSSAQQVANVMGLLRGRTGKTADLGSXDGRLVIEAYKQGLRPAVGYELNPWLLWLARYRARRAGYEGKVSFLKQDLWKANLSDCYNVIVFLAPSVKPPLAAKLLAELPDEARVVAGRFPFPSWTPSSTIGQGLEQAWAYDMKEVRRVARSCTEGCAH
SIO_010081: ANTKMT
subclass of: SO_0000673
so part of: ANTKMT
location: join(450912..451073,451164..451267,451667..451807,452024..452074,452373..452561)
location: region:450912-452561:1
so has part: feature:450912-451073:1:exon
so has part: feature:451164-451267:1:exon
so has part: feature:451667-451807:1:exon
so has part: feature:452024-452074:1:exon
so has part: feature:452373-452561:1:exon

XP_010717630.2
type: Protein
SIO_000068: ncbiprotein

position:450912:1
position: 450912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452561:1
position: 452561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:450912-451073:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:451164-451267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:451667-451807:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:452024-452074:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:452373-452561:1:exon

CCDC78
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CCDC78
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(453321..469708)
location: region:453321-469708:-1
so has part: feature:453321-469708:-1:exon
subclass of: SO_0000010

100547492
type: Gene
SIO_000068: ncbigene

position:453321:-1
position: 453321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:469708:-1
position: 469708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453321-469708:-1:exon

CCDC78
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC78
product: coiled-coil domain containing 78, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_010719329.3
SIO_010081: CCDC78
subclass of: SO_0000673
so part of: CCDC78
location: complement(join(453321..453628,454336..454436,455268..455334,457016..457059,457501..457672,458220..458431,459790..459915,460336..460414,460976..461064,461641..461691,461780..461941,465165..465344,465601..465687,466606..466737,466941..469631))
location: region:453321-469631:-1
so has part: feature:466941-469631:-1:exon
so has part: feature:466606-466737:-1:exon
so has part: feature:465601-465687:-1:exon
so has part: feature:465165-465344:-1:exon
so has part: feature:461780-461941:-1:exon
so has part: feature:461641-461691:-1:exon
so has part: feature:460976-461064:-1:exon
so has part: feature:460336-460414:-1:exon
so has part: feature:459790-459915:-1:exon
so has part: feature:458220-458431:-1:exon
so has part: feature:457501-457672:-1:exon
so has part: feature:457016-457059:-1:exon
so has part: feature:455268-455334:-1:exon
so has part: feature:454336-454436:-1:exon
so has part: feature:453321-453628:-1:exon

position:469631:-1
position: 469631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466941-469631:-1:exon

position:466941:-1
position: 466941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:466606-466737:-1:exon

position:466606:-1
position: 466606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466737:-1
position: 466737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465601-465687:-1:exon

position:465601:-1
position: 465601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465687:-1
position: 465687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:465165-465344:-1:exon

position:465165:-1
position: 465165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465344:-1
position: 465344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:461780-461941:-1:exon

position:461780:-1
position: 461780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461941:-1
position: 461941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:461641-461691:-1:exon

position:461641:-1
position: 461641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461691:-1
position: 461691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:460976-461064:-1:exon

position:460976:-1
position: 460976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:461064:-1
position: 461064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:460336-460414:-1:exon

position:460336:-1
position: 460336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460414:-1
position: 460414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:459790-459915:-1:exon

position:459790:-1
position: 459790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459915:-1
position: 459915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:458220-458431:-1:exon

position:458220:-1
position: 458220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458431:-1
position: 458431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:457501-457672:-1:exon

position:457501:-1
position: 457501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457672:-1
position: 457672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:457016-457059:-1:exon

position:457016:-1
position: 457016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457059:-1
position: 457059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:455268-455334:-1:exon

position:455268:-1
position: 455268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455334:-1
position: 455334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:454336-454436:-1:exon

position:454336:-1
position: 454336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454436:-1
position: 454436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:453321-453628:-1:exon

position:453628:-1
position: 453628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC78
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC78
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 78 isoform X1
translation: MDFGSVADKENVNALTEQAQHLANKNVQLQDRNERLHAGFGDVQERMRRLTGSKPDLSPRTIFNEEEKLKISKELVDLQIETNKMKEQYETEKFELKNMILALENRVLELELRSEKVSEERDALRDHLHTLETSRRELADEYIILKSNYLALGKELDQEVLKNEELSLELLSLTNARSTESNHHHSHALATEPAAEPDRVRVTVHRPPAQKVKPEDVAAPEQEWQNPGRNLLGNQDHIKEEIEKLKQTYDSQQQKLEEKVIDMEKELQKAKKAVHDPQQKLAEQSAVLLASRSQLQEVEAENSQLQLKLKELSEEYRCRLTQYIRDVAEYMDSKSSTRTGPSKALAEHADMKGFVDNMLKDIRASYKAREEQLAGAARSYKKRMKNLAKKHENLLIAYSVQREKIRSVGSSEMDSGPAELHFAITDPELLTNTTQELNRLRENKAKLEMQLHELQKKRLKETSGFQLSPDQKRDEEGWAEVRKQLQEFTHTTQEDLEKERSQLLTRAIVAEEQVSELQDYIEKHLARYRQEVLWVRKLAGGEEQRARSAGAADAHSLPRSRRAISREL
SIO_010081: CCDC78
subclass of: SO_0000673
so part of: CCDC78
location: complement(join(453502..453628,454336..454436,455268..455334,457016..457059,457501..457672,458220..458431,459790..459915,460336..460414,460976..461064,461641..461691,461780..461941,465165..465344,465601..465687,466606..466737,466941..467018))
location: region:453502-467018:-1
so has part: feature:466941-467018:-1:exon
so has part: feature:466606-466737:-1:exon
so has part: feature:465601-465687:-1:exon
so has part: feature:465165-465344:-1:exon
so has part: feature:461780-461941:-1:exon
so has part: feature:461641-461691:-1:exon
so has part: feature:460976-461064:-1:exon
so has part: feature:460336-460414:-1:exon
so has part: feature:459790-459915:-1:exon
so has part: feature:458220-458431:-1:exon
so has part: feature:457501-457672:-1:exon
so has part: feature:457016-457059:-1:exon
so has part: feature:455268-455334:-1:exon
so has part: feature:454336-454436:-1:exon
so has part: feature:453502-453628:-1:exon

XP_010717631.1
type: Protein
SIO_000068: ncbiprotein

position:453502:-1
position: 453502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:467018:-1
position: 467018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466941-467018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466606-466737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465601-465687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465165-465344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461780-461941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461641-461691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460976-461064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460336-460414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459790-459915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:458220-458431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457501-457672:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:457016-457059:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:455268-455334:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454336-454436:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:453502-453628:-1:exon

CCDC78
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC78
product: coiled-coil domain containing 78, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019620673.1
SIO_010081: CCDC78
subclass of: SO_0000673
so part of: CCDC78
location: complement(join(457069..457403,457501..457672,458220..458431,459790..459915,460336..460414,460976..461064,461641..461691,461780..461941,465165..465344,465601..465687,466606..466737,466941..469708))
location: region:457069-469708:-1
so has part: feature:466941-469708:-1:exon
so has part: feature:466606-466737:-1:exon
so has part: feature:465601-465687:-1:exon
so has part: feature:465165-465344:-1:exon
so has part: feature:461780-461941:-1:exon
so has part: feature:461641-461691:-1:exon
so has part: feature:460976-461064:-1:exon
so has part: feature:460336-460414:-1:exon
so has part: feature:459790-459915:-1:exon
so has part: feature:458220-458431:-1:exon
so has part: feature:457501-457672:-1:exon
so has part: feature:457069-457403:-1:exon

position:457069:-1
position: 457069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466941-469708:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466606-466737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465601-465687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465165-465344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461780-461941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461641-461691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460976-461064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460336-460414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459790-459915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:458220-458431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457501-457672:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:457069-457403:-1:exon

position:457403:-1
position: 457403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC78
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC78
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 78 isoform X2
translation: MDFGSVADKENVNALTEQAQHLANKNVQLQDRNERLHAGFGDVQERMRRLTGSKPDLSPRTIFNEEEKLKISKELVDLQIETNKMKEQYETEKFELKNMILALENRVLELELRSEKVSEERDALRDHLHTLETSRRELADEYIILKSNYLALGKELDQEVLKNEELSLELLSLTNARSTESNHHHSHALATEPAAEPDRVRVTVHRPPAQKVKPEDVAAPEQEWQNPGRNLLGNQDHIKEEIEKLKQTYDSQQQKLEEKVIDMEKELQKAKKAVHDPQQKLAEQSAVLLASRSQLQEVEAENSQLQLKLKELSEEYRCRLTQYIRDVAEYMDSKSSTRTGPSKALAEHADMKGFVDNMLKDIRASYKAREEQLAGAARSYKKRMKNLAKKHENLLIAYSVQREKIRSVGSSEMDSGPAELHFAITDPELLTNTTQELNRLRENKAKLEMQLHELQKGFAVSLWQGQGQCLLTLGCPSRSTTHRSTQVCSAACH
SIO_010081: CCDC78
subclass of: SO_0000673
so part of: CCDC78
location: complement(join(457290..457403,457501..457672,458220..458431,459790..459915,460336..460414,460976..461064,461641..461691,461780..461941,465165..465344,465601..465687,466606..466737,466941..467018))
location: region:457290-467018:-1
so has part: feature:466941-467018:-1:exon
so has part: feature:466606-466737:-1:exon
so has part: feature:465601-465687:-1:exon
so has part: feature:465165-465344:-1:exon
so has part: feature:461780-461941:-1:exon
so has part: feature:461641-461691:-1:exon
so has part: feature:460976-461064:-1:exon
so has part: feature:460336-460414:-1:exon
so has part: feature:459790-459915:-1:exon
so has part: feature:458220-458431:-1:exon
so has part: feature:457501-457672:-1:exon
so has part: feature:457290-457403:-1:exon

XP_019476218.1
type: Protein
SIO_000068: ncbiprotein

position:457290:-1
position: 457290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466941-467018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:466606-466737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465601-465687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465165-465344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:461780-461941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:461641-461691:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460976-461064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460336-460414:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:459790-459915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:458220-458431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:457501-457672:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:457290-457403:-1:exon

WDR24
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: WDR24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(476786..482477)
location: region:476786-482477:-1
so has part: feature:476786-482477:-1:exon
subclass of: SO_0000010

100545185
type: Gene
SIO_000068: ncbigene

position:476786:-1
position: 476786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482477:-1
position: 482477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:476786-482477:-1:exon

WDR24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: WDR24
product: WD repeat domain 24, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 145 samples with support for all annotated introns
transcript id: XM_019620671.2
SIO_010081: WDR24
subclass of: SO_0000673
so part of: WDR24
location: complement(join(476786..477117,477201..477385,477596..477930,478018..478122,478344..478465,479388..479503,479758..480433,480856..481033,481311..481983,482362..482477))
location: region:476786-482477:-1
so has part: feature:482362-482477:-1:exon
so has part: feature:481311-481983:-1:exon
so has part: feature:480856-481033:-1:exon
so has part: feature:479758-480433:-1:exon
so has part: feature:479388-479503:-1:exon
so has part: feature:478344-478465:-1:exon
so has part: feature:478018-478122:-1:exon
so has part: feature:477596-477930:-1:exon
so has part: feature:477201-477385:-1:exon
so has part: feature:476786-477117:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482362-482477:-1:exon

position:482362:-1
position: 482362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:481311-481983:-1:exon

position:481311:-1
position: 481311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481983:-1
position: 481983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:480856-481033:-1:exon

position:480856:-1
position: 480856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481033:-1
position: 481033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:479758-480433:-1:exon

position:479758:-1
position: 479758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:480433:-1
position: 480433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:479388-479503:-1:exon

position:479388:-1
position: 479388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479503:-1
position: 479503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:478344-478465:-1:exon

position:478344:-1
position: 478344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478465:-1
position: 478465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:478018-478122:-1:exon

position:478018:-1
position: 478018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478122:-1
position: 478122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:477596-477930:-1:exon

position:477596:-1
position: 477596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477930:-1
position: 477930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:477201-477385:-1:exon

position:477201:-1
position: 477201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477385:-1
position: 477385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:476786-477117:-1:exon

position:477117:-1
position: 477117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WDR24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: WDR24
product: WD repeat domain 24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_010719330.3
SIO_010081: WDR24
subclass of: SO_0000673
so part of: WDR24
location: complement(join(476786..477117,477201..477385,477596..477933,478018..478122,478344..478465,479388..479503,479758..480433,480856..481033,481311..481983,482362..482477))
location: region:476786-482477:-1
so has part: feature:482362-482477:-1:exon
so has part: feature:481311-481983:-1:exon
so has part: feature:480856-481033:-1:exon
so has part: feature:479758-480433:-1:exon
so has part: feature:479388-479503:-1:exon
so has part: feature:478344-478465:-1:exon
so has part: feature:478018-478122:-1:exon
so has part: feature:477596-477933:-1:exon
so has part: feature:477201-477385:-1:exon
so has part: feature:476786-477117:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482362-482477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:481311-481983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480856-481033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479758-480433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479388-479503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478344-478465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478018-478122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477596-477933:-1:exon

position:477933:-1
position: 477933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:477201-477385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:476786-477117:-1:exon

WDR24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: WDR24
product: WD repeat domain 24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 198 samples with support for all annotated introns
transcript id: XM_010719332.3
SIO_010081: WDR24
subclass of: SO_0000673
so part of: WDR24
location: complement(join(476786..477117,477201..477385,477596..477933,478018..478122,478344..478465,479388..479503,479758..480433,480856..481033,481311..481983,482351..482468))
location: region:476786-482468:-1
so has part: feature:482351-482468:-1:exon
so has part: feature:481311-481983:-1:exon
so has part: feature:480856-481033:-1:exon
so has part: feature:479758-480433:-1:exon
so has part: feature:479388-479503:-1:exon
so has part: feature:478344-478465:-1:exon
so has part: feature:478018-478122:-1:exon
so has part: feature:477596-477933:-1:exon
so has part: feature:477201-477385:-1:exon
so has part: feature:476786-477117:-1:exon

position:482468:-1
position: 482468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482351-482468:-1:exon

position:482351:-1
position: 482351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:481311-481983:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480856-481033:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479758-480433:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479388-479503:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478344-478465:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:478018-478122:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477596-477933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:477201-477385:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:476786-477117:-1:exon

WDR24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: WDR24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GATOR complex protein WDR24 isoform X2
translation: MEKMARVSTALGGNTLTGRTMFCHLDAPANAISVCRDAAQVVVAGRNIFKIYSIEEEQFVEKLNLRVGRKPSLNFSCADVVWHQMDENLLATAATNGVVVTWNLGKPSRNKQDQLFTEHKRTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKDSVSTFSGQSESVRDVQFSIRDYFTFAATFENGNVQLWDIRRPDRYERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMNTTRAKEIYCVQTIASVARVKWRPECKHHIATCSMMVDHNIYVWDVRRPFIPSAMFEEHKDVTTGIVWRHLHDPYFLLSGSKDSTLYQHIFKDASQPIDRANPEGLCYSLYGDLAFAAKESLISSDSNRKPYIGDRRHPIFFKRKLDPTEQFEYISSSSALSVFETDVESGSMDWFVHTAKQYALAGRPLAELCDHNAKVAKGLDRNQVAQTWTMLRIIYSSLGTVSSTNLNHSMGKGSTTLPLMNSFNLKDIPSGLGSESRLDRSKGESRTENILMDSSSTLINNEDNEETEGSDVPADYLLGDVEADEDDLYMMDHENPHEEQEYSLPQEAFPLRHEIVDNPSALDHLQDKADSPHVSGNEAETVSLTPVESFSLISISHSLYENRLPSDFFNPIVRDTLLFYAEQGDVQTAVSVLIVLGDRIRKEIDEQTQEHWYTSYIDLLQRFQLWNISNEVIKLSTCRAINCLNQASTTLHINCSNCKRPMSNRGWICDRCRQCASMCAVCHHVVKGLFVWCQGCSHGGHLQHIMKWLETSSHCPAGCGHLCEYT
SIO_010081: WDR24
subclass of: SO_0000673
so part of: WDR24
location: complement(join(476949..477117,477201..477385,477596..477930,478018..478122,478344..478465,479388..479503,479758..480433,480856..481033,481311..481791))
location: region:476949-481791:-1
so has part: feature:481311-481791:-1:exon
so has part: feature:480856-481033:-1:exon
so has part: feature:479758-480433:-1:exon
so has part: feature:479388-479503:-1:exon
so has part: feature:478344-478465:-1:exon
so has part: feature:478018-478122:-1:exon
so has part: feature:477596-477930:-1:exon
so has part: feature:477201-477385:-1:exon
so has part: feature:476949-477117:-1:exon

XP_019476216.1
type: Protein
SIO_000068: ncbiprotein

position:476949:-1
position: 476949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481791:-1
position: 481791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481311-481791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480856-481033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479758-480433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479388-479503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478344-478465:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478018-478122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477596-477930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477201-477385:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:476949-477117:-1:exon

WDR24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: WDR24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GATOR complex protein WDR24 isoform X1
translation: MEKMARVSTALGGNTLTGRTMFCHLDAPANAISVCRDAAQVVVAGRNIFKIYSIEEEQFVEKLNLRVGRKPSLNFSCADVVWHQMDENLLATAATNGVVVTWNLGKPSRNKQDQLFTEHKRTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKDSVSTFSGQSESVRDVQFSIRDYFTFAATFENGNVQLWDIRRPDRYERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMNTTRAKEIYCVQTIASVARVKWRPECKHHIATCSMMVDHNIYVWDVRRPFIPSAMFEEHKDVTTGIVWRHLHDPYFLLSGSKDSTLYQHIFKDASQPIDRANPEGLCYSLYGDLAFAAKESLISSDSNRKPYIGDRRHPIFFKRKLDPTEQFEYISSSSALSVFETDVESGSMDWFVHTAKQYALAGRPLAELCDHNAKVAKGLDRNQVAQTWTMLRIIYSSLGTVSSTNLNHSMGKGSTTLPLMNSFNLKDIPSGLGSESRLDRSKGESRTENILMDSSSTLINNEDNEETEGSDVPADYLLGDVEADEDDLYMMDHENPHAEEQEYSLPQEAFPLRHEIVDNPSALDHLQDKADSPHVSGNEAETVSLTPVESFSLISISHSLYENRLPSDFFNPIVRDTLLFYAEQGDVQTAVSVLIVLGDRIRKEIDEQTQEHWYTSYIDLLQRFQLWNISNEVIKLSTCRAINCLNQASTTLHINCSNCKRPMSNRGWICDRCRQCASMCAVCHHVVKGLFVWCQGCSHGGHLQHIMKWLETSSHCPAGCGHLCEYT
SIO_010081: WDR24
subclass of: SO_0000673
so part of: WDR24
location: complement(join(476949..477117,477201..477385,477596..477933,478018..478122,478344..478465,479388..479503,479758..480433,480856..481033,481311..481791))
location: region:476949-481791:-1
so has part: feature:481311-481791:-1:exon
so has part: feature:480856-481033:-1:exon
so has part: feature:479758-480433:-1:exon
so has part: feature:479388-479503:-1:exon
so has part: feature:478344-478465:-1:exon
so has part: feature:478018-478122:-1:exon
so has part: feature:477596-477933:-1:exon
so has part: feature:477201-477385:-1:exon
so has part: feature:476949-477117:-1:exon

XP_010717632.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481311-481791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480856-481033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479758-480433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479388-479503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478344-478465:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478018-478122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477596-477933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477201-477385:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:476949-477117:-1:exon

WDR24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: WDR24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GATOR complex protein WDR24 isoform X1
translation: MEKMARVSTALGGNTLTGRTMFCHLDAPANAISVCRDAAQVVVAGRNIFKIYSIEEEQFVEKLNLRVGRKPSLNFSCADVVWHQMDENLLATAATNGVVVTWNLGKPSRNKQDQLFTEHKRTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKDSVSTFSGQSESVRDVQFSIRDYFTFAATFENGNVQLWDIRRPDRYERMFTAHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMNTTRAKEIYCVQTIASVARVKWRPECKHHIATCSMMVDHNIYVWDVRRPFIPSAMFEEHKDVTTGIVWRHLHDPYFLLSGSKDSTLYQHIFKDASQPIDRANPEGLCYSLYGDLAFAAKESLISSDSNRKPYIGDRRHPIFFKRKLDPTEQFEYISSSSALSVFETDVESGSMDWFVHTAKQYALAGRPLAELCDHNAKVAKGLDRNQVAQTWTMLRIIYSSLGTVSSTNLNHSMGKGSTTLPLMNSFNLKDIPSGLGSESRLDRSKGESRTENILMDSSSTLINNEDNEETEGSDVPADYLLGDVEADEDDLYMMDHENPHAEEQEYSLPQEAFPLRHEIVDNPSALDHLQDKADSPHVSGNEAETVSLTPVESFSLISISHSLYENRLPSDFFNPIVRDTLLFYAEQGDVQTAVSVLIVLGDRIRKEIDEQTQEHWYTSYIDLLQRFQLWNISNEVIKLSTCRAINCLNQASTTLHINCSNCKRPMSNRGWICDRCRQCASMCAVCHHVVKGLFVWCQGCSHGGHLQHIMKWLETSSHCPAGCGHLCEYT
SIO_010081: WDR24
subclass of: SO_0000673
so part of: WDR24
location: complement(join(476949..477117,477201..477385,477596..477933,478018..478122,478344..478465,479388..479503,479758..480433,480856..481033,481311..481791))
location: region:476949-481791:-1
so has part: feature:481311-481791:-1:exon
so has part: feature:480856-481033:-1:exon
so has part: feature:479758-480433:-1:exon
so has part: feature:479388-479503:-1:exon
so has part: feature:478344-478465:-1:exon
so has part: feature:478018-478122:-1:exon
so has part: feature:477596-477933:-1:exon
so has part: feature:477201-477385:-1:exon
so has part: feature:476949-477117:-1:exon

XP_010717634.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:481311-481791:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480856-481033:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479758-480433:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479388-479503:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478344-478465:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:478018-478122:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477596-477933:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477201-477385:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:476949-477117:-1:exon

FBXL16
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FBXL16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(484618..496508)
location: region:484618-496508:-1
so has part: feature:484618-496508:-1:exon
subclass of: SO_0000010

100547186
type: Gene
SIO_000068: ncbigene

position:484618:-1
position: 484618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:496508:-1
position: 496508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484618-496508:-1:exon

FBXL16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBXL16
product: F-box and leucine rich repeat protein 16, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_010719333.1
SIO_010081: FBXL16
subclass of: SO_0000673
so part of: FBXL16
location: complement(join(484618..484788,485001..485064,485709..485793,485879..486387,487231..487950,496367..496508))
location: region:484618-496508:-1
so has part: feature:496367-496508:-1:exon
so has part: feature:487231-487950:-1:exon
so has part: feature:485879-486387:-1:exon
so has part: feature:485709-485793:-1:exon
so has part: feature:485001-485064:-1:exon
so has part: feature:484618-484788:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496367-496508:-1:exon

position:496367:-1
position: 496367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:487231-487950:-1:exon

position:487231:-1
position: 487231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487950:-1
position: 487950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:485879-486387:-1:exon

position:485879:-1
position: 485879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486387:-1
position: 486387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:485709-485793:-1:exon

position:485709:-1
position: 485709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485793:-1
position: 485793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:485001-485064:-1:exon

position:485001:-1
position: 485001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485064:-1
position: 485064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:484618-484788:-1:exon

position:484788:-1
position: 484788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXL16
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBXL16
product: F-box and leucine rich repeat protein 16, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010719334.1
SIO_010081: FBXL16
subclass of: SO_0000673
so part of: FBXL16
location: complement(join(484618..484788,485001..485064,485709..485793,485879..486387,487231..487950,490367..490491,490839..491059,496367..496508))
location: region:484618-496508:-1
so has part: feature:496367-496508:-1:exon
so has part: feature:490839-491059:-1:exon
so has part: feature:490367-490491:-1:exon
so has part: feature:487231-487950:-1:exon
so has part: feature:485879-486387:-1:exon
so has part: feature:485709-485793:-1:exon
so has part: feature:485001-485064:-1:exon
so has part: feature:484618-484788:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496367-496508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:490839-491059:-1:exon

position:490839:-1
position: 490839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491059:-1
position: 491059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:490367-490491:-1:exon

position:490367:-1
position: 490367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:490491:-1
position: 490491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:487231-487950:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:485879-486387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:485709-485793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:485001-485064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484618-484788:-1:exon

FBXL16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FBXL16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/LRR-repeat protein 16
translation: MSNPRNGDTKPPCLPRNGLVKIPTQPNGLGSASITKGTPAVKNRLCQPSSVPAILSPALAPRSDLPIPSLASPLSLAALAGVSSPPGTSLVALNSSEAIPGSEHPSPERLPGSPSERQLVVDEKILNRLFWYFSACEKCVLAQVCKAWRRVLYQPKFWVGLTPVLHTKELYNVLPGGEKEFVSLQGFAVRGFDGFCLVGVSDLDICEFIDNYPLSKKGVKSMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLNARITALSVSDCINVADDAIAAISQLLPNLAELNLQAYHVTDTALAYFTAKQGYTTHTLRLNSCWEITNHGVVNMVHSLPNLSVLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYIACDLHKLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLGMGSLRLLSLAGCPLLTTTGLSGLVQLQELEELELTNCPGATPELFKYFSQHLPCCMVIE
SIO_010081: FBXL16
subclass of: SO_0000673
so part of: FBXL16
location: complement(join(484640..484788,485001..485064,485709..485793,485879..486387,487231..487935))
location: region:484640-487935:-1
so has part: feature:487231-487935:-1:exon
so has part: feature:485879-486387:-1:exon
so has part: feature:485709-485793:-1:exon
so has part: feature:485001-485064:-1:exon
so has part: feature:484640-484788:-1:exon

XP_010717635.1
type: Protein
SIO_000068: ncbiprotein

position:484640:-1
position: 484640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487935:-1
position: 487935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487231-487935:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485879-486387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485709-485793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485001-485064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484640-484788:-1:exon

FBXL16
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FBXL16
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/LRR-repeat protein 16
translation: MSNPRNGDTKPPCLPRNGLVKIPTQPNGLGSASITKGTPAVKNRLCQPSSVPAILSPALAPRSDLPIPSLASPLSLAALAGVSSPPGTSLVALNSSEAIPGSEHPSPERLPGSPSERQLVVDEKILNRLFWYFSACEKCVLAQVCKAWRRVLYQPKFWVGLTPVLHTKELYNVLPGGEKEFVSLQGFAVRGFDGFCLVGVSDLDICEFIDNYPLSKKGVKSMSLKRSTITDAGLEVMLEQMQGVVRLELSGCNDFTEAGLWSSLNARITALSVSDCINVADDAIAAISQLLPNLAELNLQAYHVTDTALAYFTAKQGYTTHTLRLNSCWEITNHGVVNMVHSLPNLSVLSLSGCSKVTDDGVELVAENLRKLRSLDLSWCPRITDMALEYIACDLHKLEELVLDRCVRITDTGLSYLSTMSSLRSLYLRWCCQVQDFGLKHLLGMGSLRLLSLAGCPLLTTTGLSGLVQLQELEELELTNCPGATPELFKYFSQHLPCCMVIE
SIO_010081: FBXL16
subclass of: SO_0000673
so part of: FBXL16
location: complement(join(484640..484788,485001..485064,485709..485793,485879..486387,487231..487935))
location: region:484640-487935:-1
so has part: feature:487231-487935:-1:exon
so has part: feature:485879-486387:-1:exon
so has part: feature:485709-485793:-1:exon
so has part: feature:485001-485064:-1:exon
so has part: feature:484640-484788:-1:exon

XP_010717636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:487231-487935:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485879-486387:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:485709-485793:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:485001-485064:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484640-484788:-1:exon

STUB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: STUB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 496901..499719
location: region:496901-499719:1
so has part: feature:496901-499719:1:exon
subclass of: SO_0000010

100546875
type: Gene
SIO_000068: ncbigene

position:496901:1
position: 496901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499719:1
position: 499719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496901-499719:1:exon

STUB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STUB1
product: STIP1 homology and U-box containing protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003210792.3
SIO_010081: STUB1
subclass of: SO_0000673
so part of: STUB1
location: join(496901..497098,497178..497343,497580..497670,498228..498284,498486..498602,498755..499719)
location: region:496901-499719:1
so has part: feature:496901-497098:1:exon
so has part: feature:497178-497343:1:exon
so has part: feature:497580-497670:1:exon
so has part: feature:498228-498284:1:exon
so has part: feature:498486-498602:1:exon
so has part: feature:498755-499719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496901-497098:1:exon

position:497098:1
position: 497098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:497178-497343:1:exon

position:497178:1
position: 497178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497343:1
position: 497343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:497580-497670:1:exon

position:497580:1
position: 497580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497670:1
position: 497670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:498228-498284:1:exon

position:498228:1
position: 498228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498284:1
position: 498284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:498486-498602:1:exon

position:498486:1
position: 498486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498602:1
position: 498602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:498755-499719:1:exon

position:498755:1
position: 498755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STUB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STUB1
product: STIP1 homology and U-box containing protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010719336.2
SIO_010081: STUB1
subclass of: SO_0000673
so part of: STUB1
location: join(496901..497098,497178..497343,497580..497670,498228..498284,498486..498602,498755..498890,499072..499719)
location: region:496901-499719:1
so has part: feature:496901-497098:1:exon
so has part: feature:497178-497343:1:exon
so has part: feature:497580-497670:1:exon
so has part: feature:498228-498284:1:exon
so has part: feature:498486-498602:1:exon
so has part: feature:498755-498890:1:exon
so has part: feature:499072-499719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:496901-497098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:497178-497343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497580-497670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498228-498284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498486-498602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498755-498890:1:exon

position:498890:1
position: 498890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:499072-499719:1:exon

position:499072:1
position: 499072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STUB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STUB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CHIP
translation: MQQHDKALADCKRALELDGQSVKAHFFLGQCQMEMENYDEAIANLQRAYNLAKEQRLNFGDDIPSALRIAKKKRWNSIEEKRINQENELHSYLTRLIMAEKERELAECRKAQQEENVDESRGRVQLAGIEAKHDKYLADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFISENGWVEDY
SIO_010081: STUB1
subclass of: SO_0000673
so part of: STUB1
location: join(496957..497098,497178..497343,497580..497670,498228..498284,498486..498602,498755..498880)
location: region:496957-498880:1
so has part: feature:496957-497098:1:exon
so has part: feature:497178-497343:1:exon
so has part: feature:497580-497670:1:exon
so has part: feature:498228-498284:1:exon
so has part: feature:498486-498602:1:exon
so has part: feature:498755-498880:1:exon

XP_003210840.2
type: Protein
SIO_000068: ncbiprotein

position:496957:1
position: 496957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498880:1
position: 498880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496957-497098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:497178-497343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497580-497670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498228-498284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498486-498602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498755-498880:1:exon

STUB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STUB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CHIP
translation: MQQHDKALADCKRALELDGQSVKAHFFLGQCQMEMENYDEAIANLQRAYNLAKEQRLNFGDDIPSALRIAKKKRWNSIEEKRINQENELHSYLTRLIMAEKERELAECRKAQQEENVDESRGRVQLAGIEAKHDKYLADMDELFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDAFISENGWVEDY
SIO_010081: STUB1
subclass of: SO_0000673
so part of: STUB1
location: join(496957..497098,497178..497343,497580..497670,498228..498284,498486..498602,498755..498880)
location: region:496957-498880:1
so has part: feature:496957-497098:1:exon
so has part: feature:497178-497343:1:exon
so has part: feature:497580-497670:1:exon
so has part: feature:498228-498284:1:exon
so has part: feature:498486-498602:1:exon
so has part: feature:498755-498880:1:exon

XP_010717638.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:496957-497098:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:497178-497343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:497580-497670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498228-498284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:498486-498602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:498755-498880:1:exon

JMJD8
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: JMJD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(500113..501645)
location: region:500113-501645:-1
so has part: feature:500113-501645:-1:exon
subclass of: SO_0000010

100547031
type: Gene
SIO_000068: ncbigene

position:500113:-1
position: 500113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501645:-1
position: 501645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500113-501645:-1:exon

JMJD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: JMJD8
product: jumonji domain containing 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010719737.2
SIO_010081: JMJD8
subclass of: SO_0000673
so part of: JMJD8
location: complement(join(500113..500380,500489..500623,500703..500770,500836..500955,501045..501113,501189..501285,501363..501411,501540..501645))
location: region:500113-501645:-1
so has part: feature:501540-501645:-1:exon
so has part: feature:501363-501411:-1:exon
so has part: feature:501189-501285:-1:exon
so has part: feature:501045-501113:-1:exon
so has part: feature:500836-500955:-1:exon
so has part: feature:500703-500770:-1:exon
so has part: feature:500489-500623:-1:exon
so has part: feature:500113-500380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501540-501645:-1:exon

position:501540:-1
position: 501540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:501363-501411:-1:exon

position:501363:-1
position: 501363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501411:-1
position: 501411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:501189-501285:-1:exon

position:501189:-1
position: 501189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501285:-1
position: 501285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:501045-501113:-1:exon

position:501045:-1
position: 501045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501113:-1
position: 501113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:500836-500955:-1:exon

position:500836:-1
position: 500836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500955:-1
position: 500955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:500703-500770:-1:exon

position:500703:-1
position: 500703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500770:-1
position: 500770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:500489-500623:-1:exon

position:500489:-1
position: 500489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500623:-1
position: 500623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:500113-500380:-1:exon

position:500380:-1
position: 500380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

JMJD8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: JMJD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: jmjC domain-containing protein 8
translation: MSPALFLQRFAFSRPVILRGVTDNSAFRALCTRQKLLAAYGERLVRLSTANTYSYRKVDVPFQEYVERLLKPQDPAALGSDTLYFFGDNNFTEWGSLFQHYVPPPFHIPGTSGAYSFGIAGSGSGVPFHWHGPGYSEVIFGRKRWFLYPPDKTPHFHPNETTLAWLQHTYPTLPPEERPLECTIRPGEVLYFPDRWWHATLNLDTSVFISTFLG
SIO_010081: JMJD8
subclass of: SO_0000673
so part of: JMJD8
location: complement(join(500300..500380,500489..500623,500703..500770,500836..500955,501045..501113,501189..501285,501363..501411,501540..501565))
location: region:500300-501565:-1
so has part: feature:501540-501565:-1:exon
so has part: feature:501363-501411:-1:exon
so has part: feature:501189-501285:-1:exon
so has part: feature:501045-501113:-1:exon
so has part: feature:500836-500955:-1:exon
so has part: feature:500703-500770:-1:exon
so has part: feature:500489-500623:-1:exon
so has part: feature:500300-500380:-1:exon

XP_010718039.2
type: Protein
SIO_000068: ncbiprotein

position:500300:-1
position: 500300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501565:-1
position: 501565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501540-501565:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501363-501411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501189-501285:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:501045-501113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500836-500955:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:500703-500770:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:500489-500623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:500300-500380:-1:exon

RHBDL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RHBDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 501819..504467
location: region:501819-504467:1
so has part: feature:501819-504467:1:exon
subclass of: SO_0000010

100546725
type: Gene
SIO_000068: ncbigene

position:501819:1
position: 501819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504467:1
position: 504467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501819-504467:1:exon

RHBDL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RHBDL1
product: rhomboid like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010719738.1
SIO_010081: RHBDL1
subclass of: SO_0000673
so part of: RHBDL1
location: join(501819..502127,502426..502574,502658..502770,502843..502943,503575..503635,503716..504467)
location: region:501819-504467:1
so has part: feature:501819-502127:1:exon
so has part: feature:502426-502574:1:exon
so has part: feature:502658-502770:1:exon
so has part: feature:502843-502943:1:exon
so has part: feature:503575-503635:1:exon
so has part: feature:503716-504467:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:501819-502127:1:exon

position:502127:1
position: 502127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:502426-502574:1:exon

position:502426:1
position: 502426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502574:1
position: 502574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:502658-502770:1:exon

position:502658:1
position: 502658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502770:1
position: 502770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:502843-502943:1:exon

position:502843:1
position: 502843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502943:1
position: 502943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:503575-503635:1:exon

position:503575:1
position: 503575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503635:1
position: 503635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:503716-504467:1:exon

position:503716:1
position: 503716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RHBDL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RHBDL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhomboid-related protein 1
translation: MEWAPSSASQDRVPAAGCGDGGHRLSPQISSKRSSSFKRAIANGQRALPRDGLLDETGLGFYKRFVRYVAYEILPCEMDRRWYFYQHRTCPPPVFMAAVTLTQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISFLYLAGVLAGSLTVSITDMRAPLVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQPSFMAHLAGAIVGISMGLTILRSYEESLRDQCGWWVVLLSYGTFLLFAVFWNIFAYDLLGAQIPPPP
SIO_010081: RHBDL1
subclass of: SO_0000673
so part of: RHBDL1
location: join(501819..502127,502426..502574,502658..502770,502843..502943,503575..503635,503716..503987)
location: region:501819-503987:1
so has part: feature:501819-502127:1:exon
so has part: feature:502426-502574:1:exon
so has part: feature:502658-502770:1:exon
so has part: feature:502843-502943:1:exon
so has part: feature:503575-503635:1:exon
so has part: feature:503716-503987:1:exon

XP_010718040.1
type: Protein
SIO_000068: ncbiprotein

position:503987:1
position: 503987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501819-502127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:502426-502574:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:502658-502770:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:502843-502943:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:503575-503635:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503716-503987:1:exon

RHOT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RHOT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 504684..516303
location: region:504684-516303:1
so has part: feature:504684-516303:1:exon
subclass of: SO_0000010

104913347
type: Gene
SIO_000068: ncbigene

position:504684:1
position: 504684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516303:1
position: 516303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504684-516303:1:exon

RHOT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RHOT2
product: ras homolog family member T2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 219 samples with support for all annotated introns
transcript id: XM_010719337.3
SIO_010081: RHOT2
subclass of: SO_0000673
so part of: RHOT2
location: join(504684..504786,505604..505685,505810..505853,507441..507494,507820..507872,508399..508507,508953..509054,509489..509587,509703..509811,510096..510216,511020..511104,512080..512225,512329..512429,512500..512630,513037..513117,513338..513460,513700..513902,515100..516303)
location: region:504684-516303:1
so has part: feature:504684-504786:1:exon
so has part: feature:505604-505685:1:exon
so has part: feature:505810-505853:1:exon
so has part: feature:507441-507494:1:exon
so has part: feature:507820-507872:1:exon
so has part: feature:508399-508507:1:exon
so has part: feature:508953-509054:1:exon
so has part: feature:509489-509587:1:exon
so has part: feature:509703-509811:1:exon
so has part: feature:510096-510216:1:exon
so has part: feature:511020-511104:1:exon
so has part: feature:512080-512225:1:exon
so has part: feature:512329-512429:1:exon
so has part: feature:512500-512630:1:exon
so has part: feature:513037-513117:1:exon
so has part: feature:513338-513460:1:exon
so has part: feature:513700-513902:1:exon
so has part: feature:515100-516303:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504684-504786:1:exon

position:504786:1
position: 504786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:505604-505685:1:exon

position:505604:1
position: 505604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505685:1
position: 505685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505810-505853:1:exon

position:505810:1
position: 505810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505853:1
position: 505853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:507441-507494:1:exon

position:507441:1
position: 507441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507494:1
position: 507494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:507820-507872:1:exon

position:507820:1
position: 507820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507872:1
position: 507872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:508399-508507:1:exon

position:508399:1
position: 508399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508507:1
position: 508507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:508953-509054:1:exon

position:508953:1
position: 508953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509054:1
position: 509054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:509489-509587:1:exon

position:509489:1
position: 509489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509587:1
position: 509587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:509703-509811:1:exon

position:509703:1
position: 509703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509811:1
position: 509811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:510096-510216:1:exon

position:510096:1
position: 510096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510216:1
position: 510216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:511020-511104:1:exon

position:511020:1
position: 511020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511104:1
position: 511104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:512080-512225:1:exon

position:512080:1
position: 512080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512225:1
position: 512225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:512329-512429:1:exon

position:512329:1
position: 512329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512429:1
position: 512429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:512500-512630:1:exon

position:512500:1
position: 512500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512630:1
position: 512630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:513037-513117:1:exon

position:513037:1
position: 513037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513117:1
position: 513117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:513338-513460:1:exon

position:513338:1
position: 513338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513460:1
position: 513460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:513700-513902:1:exon

position:513700:1
position: 513700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:513902:1
position: 513902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:515100-516303:1:exon

position:515100:1
position: 515100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RHOT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RHOT2
product: ras homolog family member T2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_010719338.3
SIO_010081: RHOT2
subclass of: SO_0000673
so part of: RHOT2
location: join(504684..504786,505604..505685,505810..505853,507441..507494,507820..507872,508399..508507,508953..509054,509489..509587,509703..509811,510096..510216,511020..511104,512080..512225,512329..512429,512500..512630,513037..513117,513338..513460,513700..513902,514693..515093)
location: region:504684-515093:1
so has part: feature:504684-504786:1:exon
so has part: feature:505604-505685:1:exon
so has part: feature:505810-505853:1:exon
so has part: feature:507441-507494:1:exon
so has part: feature:507820-507872:1:exon
so has part: feature:508399-508507:1:exon
so has part: feature:508953-509054:1:exon
so has part: feature:509489-509587:1:exon
so has part: feature:509703-509811:1:exon
so has part: feature:510096-510216:1:exon
so has part: feature:511020-511104:1:exon
so has part: feature:512080-512225:1:exon
so has part: feature:512329-512429:1:exon
so has part: feature:512500-512630:1:exon
so has part: feature:513037-513117:1:exon
so has part: feature:513338-513460:1:exon
so has part: feature:513700-513902:1:exon
so has part: feature:514693-515093:1:exon

position:515093:1
position: 515093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504684-504786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505604-505685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505810-505853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:507441-507494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507820-507872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508399-508507:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508953-509054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509489-509587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509703-509811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:510096-510216:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511020-511104:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:512080-512225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:512329-512429:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:512500-512630:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:513037-513117:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:513338-513460:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:513700-513902:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:514693-515093:1:exon

position:514693:1
position: 514693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RHOT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RHOT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial Rho GTPase 2 isoform X1
translation: MALVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSETEQTEDELQEEIAKANVVCVVYDVTKEATIEKIRTKWIPMVNGGAEKGARIPIILVGNKSDLQMGSSMEVILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEEKQLRPACSRALTRIFNLSDQDNNQILSDDELNYFQKSCFGNPLAPQALEDVKMVVWKNTTDGVQDNGLTLNGFLFLNTLFIQRGRHETTWTILRRFGYDDELELTDDYLYPQFRLPPGCSTELNHLGYQFLQRLFEKHDKDQDGALSPAELQNFFSVFPCMPWGPELYNTVCTTDKGLLSLHGFLCQWTLVAYLDVQHCLECLGYLGYPILSEQDSQTQALTVTREKRIDLEKGQTQRNVFLCKVLGARGAGKSAFLQAFLGRSLAAQRENPGEPSLYTINTVQVNGQEKYLILHEVSAEMQFTKASDAACDVACLIYDLSDPKSFNYCASIYKQHYMDSQIPCVFVASKTDLPEASQQPGLSPAEFCYKHCLPPPFLFSCHSQGPPSTAVYTKLATAATFPHLNAVELGAASFWLRVALGAAVTALVGFTLYRVLAKNK
SIO_010081: RHOT2
subclass of: SO_0000673
so part of: RHOT2
location: join(504754..504786,505604..505685,505810..505853,507441..507494,507820..507872,508399..508507,508953..509054,509489..509587,509703..509811,510096..510216,511020..511104,512080..512225,512329..512429,512500..512630,513037..513117,513338..513460,513700..513902,515100..515217)
location: region:504754-515217:1
so has part: feature:504754-504786:1:exon
so has part: feature:505604-505685:1:exon
so has part: feature:505810-505853:1:exon
so has part: feature:507441-507494:1:exon
so has part: feature:507820-507872:1:exon
so has part: feature:508399-508507:1:exon
so has part: feature:508953-509054:1:exon
so has part: feature:509489-509587:1:exon
so has part: feature:509703-509811:1:exon
so has part: feature:510096-510216:1:exon
so has part: feature:511020-511104:1:exon
so has part: feature:512080-512225:1:exon
so has part: feature:512329-512429:1:exon
so has part: feature:512500-512630:1:exon
so has part: feature:513037-513117:1:exon
so has part: feature:513338-513460:1:exon
so has part: feature:513700-513902:1:exon
so has part: feature:515100-515217:1:exon

XP_010717639.3
type: Protein
SIO_000068: ncbiprotein

position:504754:1
position: 504754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515217:1
position: 515217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504754-504786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505604-505685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505810-505853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:507441-507494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507820-507872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508399-508507:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508953-509054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509489-509587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509703-509811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:510096-510216:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511020-511104:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:512080-512225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:512329-512429:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:512500-512630:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:513037-513117:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:513338-513460:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:513700-513902:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:515100-515217:1:exon

RHOT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RHOT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial Rho GTPase 2 isoform X2
translation: MALVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSETEQTEDELQEEIAKANVVCVVYDVTKEATIEKIRTKWIPMVNGGAEKGARIPIILVGNKSDLQMGSSMEVILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEEKQLRPACSRALTRIFNLSDQDNNQILSDDELNYFQKSCFGNPLAPQALEDVKMVVWKNTTDGVQDNGLTLNGFLFLNTLFIQRGRHETTWTILRRFGYDDELELTDDYLYPQFRLPPGCSTELNHLGYQFLQRLFEKHDKDQDGALSPAELQNFFSVFPCMPWGPELYNTVCTTDKGLLSLHGFLCQWTLVAYLDVQHCLECLGYLGYPILSEQDSQTQALTVTREKRIDLEKGQTQRNVFLCKVLGARGAGKSAFLQAFLGRSLAAQRENPGEPSLYTINTVQVNGQEKYLILHEVSAEMQFTKASDAACDVACLIYDLSDPKSFNYCASIYKQHYMDSQIPCVFVASKTDLPEASQQPGLSPAEFCYKHCLPPPFLFSCHSQGPPSTAVYTKLATAATFPSVPWLLLIFSPLCQHHCAHFWGSLHLEL
SIO_010081: RHOT2
subclass of: SO_0000673
so part of: RHOT2
location: join(504754..504786,505604..505685,505810..505853,507441..507494,507820..507872,508399..508507,508953..509054,509489..509587,509703..509811,510096..510216,511020..511104,512080..512225,512329..512429,512500..512630,513037..513117,513338..513460,513700..513902,514693..514780)
location: region:504754-514780:1
so has part: feature:504754-504786:1:exon
so has part: feature:505604-505685:1:exon
so has part: feature:505810-505853:1:exon
so has part: feature:507441-507494:1:exon
so has part: feature:507820-507872:1:exon
so has part: feature:508399-508507:1:exon
so has part: feature:508953-509054:1:exon
so has part: feature:509489-509587:1:exon
so has part: feature:509703-509811:1:exon
so has part: feature:510096-510216:1:exon
so has part: feature:511020-511104:1:exon
so has part: feature:512080-512225:1:exon
so has part: feature:512329-512429:1:exon
so has part: feature:512500-512630:1:exon
so has part: feature:513037-513117:1:exon
so has part: feature:513338-513460:1:exon
so has part: feature:513700-513902:1:exon
so has part: feature:514693-514780:1:exon

XP_010717640.3
type: Protein
SIO_000068: ncbiprotein

position:514780:1
position: 514780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504754-504786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505604-505685:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505810-505853:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:507441-507494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:507820-507872:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:508399-508507:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:508953-509054:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:509489-509587:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:509703-509811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:510096-510216:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511020-511104:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:512080-512225:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:512329-512429:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:512500-512630:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:513037-513117:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:513338-513460:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:513700-513902:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:514693-514780:1:exon

WDR90
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: WDR90
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 517832..548517
location: region:517832-548517:1
so has part: feature:517832-548517:1:exon
subclass of: SO_0000010

100546572
type: Gene
SIO_000068: ncbigene

position:517832:1
position: 517832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548517:1
position: 548517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517832-548517:1:exon

WDR90
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: WDR90
product: WD repeat domain 90
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555771.1
SIO_010081: WDR90
subclass of: SO_0000673
so part of: WDR90
location: join(517832..517877,518104..518246,518318..518494,518705..518843,519297..519467,520385..520508,520762..520829,521547..521656,522091..522309,522884..522946,523137..523205,523497..523607,523682..523827,524221..524278,525594..525712,526148..526309,527536..527639,528627..528743,529284..529519,529966..530105,530578..530708,531559..531689,532110..532271,532884..533012,533334..533467,533545..533582,534029..534148,534552..534728,535558..535658,536571..536673,537150..537271,537638..537797,539333..539523,539785..539953,540351..540462,540976..541147,541704..541826,542025..542205,542635..542765,543701..543844,545041..545160,545752..546092,548101..548137,548224..548517)
location: region:517832-548517:1
so has part: feature:517832-517877:1:exon
so has part: feature:518104-518246:1:exon
so has part: feature:518318-518494:1:exon
so has part: feature:518705-518843:1:exon
so has part: feature:519297-519467:1:exon
so has part: feature:520385-520508:1:exon
so has part: feature:520762-520829:1:exon
so has part: feature:521547-521656:1:exon
so has part: feature:522091-522309:1:exon
so has part: feature:522884-522946:1:exon
so has part: feature:523137-523205:1:exon
so has part: feature:523497-523607:1:exon
so has part: feature:523682-523827:1:exon
so has part: feature:524221-524278:1:exon
so has part: feature:525594-525712:1:exon
so has part: feature:526148-526309:1:exon
so has part: feature:527536-527639:1:exon
so has part: feature:528627-528743:1:exon
so has part: feature:529284-529519:1:exon
so has part: feature:529966-530105:1:exon
so has part: feature:530578-530708:1:exon
so has part: feature:531559-531689:1:exon
so has part: feature:532110-532271:1:exon
so has part: feature:532884-533012:1:exon
so has part: feature:533334-533467:1:exon
so has part: feature:533545-533582:1:exon
so has part: feature:534029-534148:1:exon
so has part: feature:534552-534728:1:exon
so has part: feature:535558-535658:1:exon
so has part: feature:536571-536673:1:exon
so has part: feature:537150-537271:1:exon
so has part: feature:537638-537797:1:exon
so has part: feature:539333-539523:1:exon
so has part: feature:539785-539953:1:exon
so has part: feature:540351-540462:1:exon
so has part: feature:540976-541147:1:exon
so has part: feature:541704-541826:1:exon
so has part: feature:542025-542205:1:exon
so has part: feature:542635-542765:1:exon
so has part: feature:543701-543844:1:exon
so has part: feature:545041-545160:1:exon
so has part: feature:545752-546092:1:exon
so has part: feature:548101-548137:1:exon
so has part: feature:548224-548517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517832-517877:1:exon

position:517877:1
position: 517877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518104-518246:1:exon

position:518104:1
position: 518104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518246:1
position: 518246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:518318-518494:1:exon

position:518318:1
position: 518318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518494:1
position: 518494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518705-518843:1:exon

position:518705:1
position: 518705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518843:1
position: 518843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:519297-519467:1:exon

position:519297:1
position: 519297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519467:1
position: 519467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:520385-520508:1:exon

position:520385:1
position: 520385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520508:1
position: 520508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:520762-520829:1:exon

position:520762:1
position: 520762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520829:1
position: 520829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:521547-521656:1:exon

position:521547:1
position: 521547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521656:1
position: 521656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:522091-522309:1:exon

position:522091:1
position: 522091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522309:1
position: 522309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:522884-522946:1:exon

position:522884:1
position: 522884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:522946:1
position: 522946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:523137-523205:1:exon

position:523137:1
position: 523137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523205:1
position: 523205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:523497-523607:1:exon

position:523497:1
position: 523497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523607:1
position: 523607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:523682-523827:1:exon

position:523682:1
position: 523682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:523827:1
position: 523827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:524221-524278:1:exon

position:524221:1
position: 524221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:524278:1
position: 524278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:525594-525712:1:exon

position:525594:1
position: 525594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:525712:1
position: 525712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:526148-526309:1:exon

position:526148:1
position: 526148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526309:1
position: 526309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:527536-527639:1:exon

position:527536:1
position: 527536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:527639:1
position: 527639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:528627-528743:1:exon

position:528627:1
position: 528627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528743:1
position: 528743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:529284-529519:1:exon

position:529284:1
position: 529284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:529519:1
position: 529519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:529966-530105:1:exon

position:529966:1
position: 529966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530105:1
position: 530105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:530578-530708:1:exon

position:530578:1
position: 530578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:530708:1
position: 530708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:531559-531689:1:exon

position:531559:1
position: 531559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:531689:1
position: 531689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:532110-532271:1:exon

position:532110:1
position: 532110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:532271:1
position: 532271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:532884-533012:1:exon

position:532884:1
position: 532884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533012:1
position: 533012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:533334-533467:1:exon

position:533334:1
position: 533334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533467:1
position: 533467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:533545-533582:1:exon

position:533545:1
position: 533545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533582:1
position: 533582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:534029-534148:1:exon

position:534029:1
position: 534029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534148:1
position: 534148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:534552-534728:1:exon

position:534552:1
position: 534552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:534728:1
position: 534728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:535558-535658:1:exon

position:535558:1
position: 535558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:535658:1
position: 535658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:536571-536673:1:exon

position:536571:1
position: 536571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536673:1
position: 536673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:537150-537271:1:exon

position:537150:1
position: 537150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537271:1
position: 537271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:537638-537797:1:exon

position:537638:1
position: 537638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537797:1
position: 537797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:539333-539523:1:exon

position:539333:1
position: 539333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539523:1
position: 539523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:539785-539953:1:exon

position:539785:1
position: 539785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:539953:1
position: 539953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:540351-540462:1:exon

position:540351:1
position: 540351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:540462:1
position: 540462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:540976-541147:1:exon

position:540976:1
position: 540976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541147:1
position: 541147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:541704-541826:1:exon

position:541704:1
position: 541704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541826:1
position: 541826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:542025-542205:1:exon

position:542025:1
position: 542025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542205:1
position: 542205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:542635-542765:1:exon

position:542635:1
position: 542635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542765:1
position: 542765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:543701-543844:1:exon

position:543701:1
position: 543701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543844:1
position: 543844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:545041-545160:1:exon

position:545041:1
position: 545041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:545160:1
position: 545160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:545752-546092:1:exon

position:545752:1
position: 545752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:546092:1
position: 546092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:548101-548137:1:exon

position:548101:1
position: 548101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548137:1
position: 548137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:548224-548517:1:exon

position:548224:1
position: 548224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR90
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: WDR90
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 90
translation: MLVPILGHRYPYRDSGCPGVLCVVSSTRRLPAAWQSPYLNVFKHFRVEEWKRSHKEGDVTTVMDKTLKGTVYRIRGSIPASNYLQLPRTGSQSLGLCGRYLYLLFRPLPRKYFVVHLDVATEENQVVRVSFSNLFKEFKSTATWLQFPFICGAAKGSLHDSTARASRQDLVGAAPANARWTCLVLDLHYVLSLYLSRRYSHLKSIKLCSNLLVKNVCTSDLLFEPGVTLSEARRASPACQGATPMPRDMAFPVPKGGKWHDHYDYIRFPPDGSSLPYDSIQRSCSSPVAGGHNSEEPLGQLPQPVMLTKAVRDRLSLIQQITSPKAMPHRCPAAAGSIPEVHLAAPEALRVGEQEAEDGMLRGMGDSVRSLAVSDGGIHVYAHQRSERAAHATHAGSEEGVHRRGPGADAPASGRASRCRSFLPDPILKLRKVIGFGGCSTKWALWTQNSSAVVYPCHAVIVTLQIQTGQQRFFTGHTDKVSALAFNGSSTLLASAQEGPLGVLRLWDFPRGSCLAVFQTHVRAVLSLSFSYSGAVLCGVGKDRHGKTMVVVWNTAQVTRGGEVLVLARAHTDVDIQTLKIAFFDDTRMVSCGRDSVRLWRVRNGALRSCPVNLGEYHALEFTDLAFEEGHSAAREPDDRTLFVCSRSGHVLEVDYKNVCVRSARRLLPAQLQDGAGPGIAINSISISSTLCATGSADGYLRLWPLDFSAVVLEAEHEAPVSSVCISPDGHKVLCTTTARNLGYLDIQSRGYSTLMRSHEDSILAFSVEGIWKQMATVSRDNTIRVWDLVSMQQLYDFTAADEMPCAVSFHPTQRILACGFDSGVVRTFSLTASDLLAEHKQHRTRIAGLTFSPDGNFMFSSCLQGTLALYSCVAQKSQVLRVLGNVVAQDAGSGPDALVLSGDSRLLAFVGPSKYVVTVMEACSLDELLRVDISILDLNSTALDSAVRVCFAPVSQGELLVSTSSNKILVLDAKTGRLVREVSPVHKLSCSSLALSKDARYLLTAGDKVIKVWDYQMRFNINFQVYIGHSEPVCQVAFTPDQRHVISIGDAIFLWDFLAVPAQGSPPALTRSSESPLLPAAEQSSEKLKDVSDVPRQTIPLPLLSSPPCLDVSPVHTAGCQSIFSESDREEEACLPGRVVENGGKDTSAFVAEPARSEDLMVVRPKVRPESCRPPAPSAREPRRETRSPKSQCCVRPDSYRHFTPHFKASVLPQSFLSPPAGNEVLKLKAVIGYNGNGRGNMVWDPDTGFFAYTCGCIIVVEDLHSGSQNHWLGHVEEISTLAVSHDAQALASASGKRDGDSHCQICIWNTQDGICTASLFHHKTQVQAMAYSRDDRFLATIGDYNDQTVALWSTYTYELLSSTRISEPVHDMAFSPFSHREMACVGKGALTFWLLEQHGADLNLKVHRAPAPEVLGPVELTSLCYGADTLLYSGTNSGQVCVWDTETNSCFMMWEADEGEIGVLVCWCNRLVSGSNTKRIRLWAVGAMQELRLKGPKARPSSVLLEHEITLDGTIVSMAFDDSLEMGIVGTTAGTLWYINWKESTSIRLISGHKSKVTEASFSPDETLCATCGEDGSVRVWSLGRMELVVQFQVLNQSCQCLAWKPHPNVAWEAESQHVVAGYSDGTIRVFSISRTEMELKMHPHATALTAIAYSTDGEMILSGGKDGIVAVSSPRTGMTIRILADHKGSAITVLQCIRKQYHDFGVEGGELWLAASSDRRVSVWASDWLKDKCELLDWLSFPAPAGPEGHGSLPPSLAAFCPWEHGTLVYVGFGMQKEALFYSLRKKQVVEKISLPYFATSLSLSPAARFMAVGFSGEYQPVLWALLVPQVCRPRNKSPGSEVPALLQGRVVCQAGKNHRSSKVGKEHSDHLLQLLTSHCPHPSVPHPQGSGTPPSLSSSATGTTRVSPMCSVQKSIKSDTSITLVHVEYNGVILGESSKTDVSPNGTANYNFTASFEYSTDGPNSWVSIAQKPVLCKYLVQILTPWRGGWRWCWQL…
SIO_010081: WDR90
subclass of: SO_0000673
so part of: WDR90
location: join(517832..517877,518104..518246,518318..518494,518705..518843,519297..519467,520385..520508,520762..520829,521547..521656,522091..522309,522884..522946,523137..523205,523497..523607,523682..523827,524221..524278,525594..525712,526148..526309,527536..527639,528627..528743,529284..529519,529966..530105,530578..530708,531559..531689,532110..532271,532884..533012,533334..533467,533545..533582,534029..534148,534552..534728,535558..535658,536571..536673,537150..537271,537638..537797,539333..539523,539785..539953,540351..540462,540976..541147,541704..541826,542025..542205,542635..542765,543701..543844,545041..545160,545752..546092,548101..548137,548224..548517)
location: region:517832-548517:1
so has part: feature:517832-517877:1:exon
so has part: feature:518104-518246:1:exon
so has part: feature:518318-518494:1:exon
so has part: feature:518705-518843:1:exon
so has part: feature:519297-519467:1:exon
so has part: feature:520385-520508:1:exon
so has part: feature:520762-520829:1:exon
so has part: feature:521547-521656:1:exon
so has part: feature:522091-522309:1:exon
so has part: feature:522884-522946:1:exon
so has part: feature:523137-523205:1:exon
so has part: feature:523497-523607:1:exon
so has part: feature:523682-523827:1:exon
so has part: feature:524221-524278:1:exon
so has part: feature:525594-525712:1:exon
so has part: feature:526148-526309:1:exon
so has part: feature:527536-527639:1:exon
so has part: feature:528627-528743:1:exon
so has part: feature:529284-529519:1:exon
so has part: feature:529966-530105:1:exon
so has part: feature:530578-530708:1:exon
so has part: feature:531559-531689:1:exon
so has part: feature:532110-532271:1:exon
so has part: feature:532884-533012:1:exon
so has part: feature:533334-533467:1:exon
so has part: feature:533545-533582:1:exon
so has part: feature:534029-534148:1:exon
so has part: feature:534552-534728:1:exon
so has part: feature:535558-535658:1:exon
so has part: feature:536571-536673:1:exon
so has part: feature:537150-537271:1:exon
so has part: feature:537638-537797:1:exon
so has part: feature:539333-539523:1:exon
so has part: feature:539785-539953:1:exon
so has part: feature:540351-540462:1:exon
so has part: feature:540976-541147:1:exon
so has part: feature:541704-541826:1:exon
so has part: feature:542025-542205:1:exon
so has part: feature:542635-542765:1:exon
so has part: feature:543701-543844:1:exon
so has part: feature:545041-545160:1:exon
so has part: feature:545752-546092:1:exon
so has part: feature:548101-548137:1:exon
so has part: feature:548224-548517:1:exon

XP_031411631.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:517832-517877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518104-518246:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518318-518494:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518705-518843:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519297-519467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:520385-520508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:520762-520829:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521547-521656:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:522091-522309:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522884-522946:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:523137-523205:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:523497-523607:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:523682-523827:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:524221-524278:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:525594-525712:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:526148-526309:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:527536-527639:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:528627-528743:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:529284-529519:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:529966-530105:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:530578-530708:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:531559-531689:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:532110-532271:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:532884-533012:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:533334-533467:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:533545-533582:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:534029-534148:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:534552-534728:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:535558-535658:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:536571-536673:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:537150-537271:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:537638-537797:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:539333-539523:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:539785-539953:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:540351-540462:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:540976-541147:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:541704-541826:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:542025-542205:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:542635-542765:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:543701-543844:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:545041-545160:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:545752-546092:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:548101-548137:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:548224-548517:1:exon

CFAP70
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CFAP70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 548230..571110
location: region:548230-571110:1
so has part: feature:548230-571110:1:exon
subclass of: SO_0000010

109370194
type: Gene
SIO_000068: ncbigene

position:548230:1
position: 548230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571110:1
position: 571110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548230-571110:1:exon

CFAP70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CFAP70
product: cilia and flagella associated protein 70, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031555806.1
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(548230..548410,548763..548861,549119..549198,550215..550391,550729..550911,551366..551457,552525..552624,553582..553716,555008..555175,555403..555483,555986..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,563598..563708,564114..564202,564885..565037,565790..565951,566364..566453,567509..567610,567812..567859,570972..571110)
location: region:548230-571110:1
so has part: feature:548230-548410:1:exon
so has part: feature:548763-548861:1:exon
so has part: feature:549119-549198:1:exon
so has part: feature:550215-550391:1:exon
so has part: feature:550729-550911:1:exon
so has part: feature:551366-551457:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555986-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:563598-563708:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:565790-565951:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548230-548410:1:exon

position:548410:1
position: 548410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:548763-548861:1:exon

position:548763:1
position: 548763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:548861:1
position: 548861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:549119-549198:1:exon

position:549119:1
position: 549119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:549198:1
position: 549198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:550215-550391:1:exon

position:550215:1
position: 550215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550391:1
position: 550391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:550729-550911:1:exon

position:550729:1
position: 550729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550911:1
position: 550911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:551366-551457:1:exon

position:551366:1
position: 551366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:551457:1
position: 551457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:552525-552624:1:exon

position:552525:1
position: 552525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:552624:1
position: 552624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:553582-553716:1:exon

position:553582:1
position: 553582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553716:1
position: 553716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:555008-555175:1:exon

position:555008:1
position: 555008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555175:1
position: 555175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:555403-555483:1:exon

position:555403:1
position: 555403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555483:1
position: 555483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:555986-556077:1:exon

position:555986:1
position: 555986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556077:1
position: 556077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:558709-558769:1:exon

position:558709:1
position: 558709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:558769:1
position: 558769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:559851-560042:1:exon

position:559851:1
position: 559851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560042:1
position: 560042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:560657-560788:1:exon

position:560657:1
position: 560657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:560788:1
position: 560788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:561427-561552:1:exon

position:561427:1
position: 561427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561552:1
position: 561552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:562058-562191:1:exon

position:562058:1
position: 562058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562191:1
position: 562191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:562269-562384:1:exon

position:562269:1
position: 562269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562384:1
position: 562384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:562545-562721:1:exon

position:562545:1
position: 562545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562721:1
position: 562721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:563598-563708:1:exon

position:563598:1
position: 563598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:563708:1
position: 563708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:564114-564202:1:exon

position:564114:1
position: 564114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:564202:1
position: 564202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:564885-565037:1:exon

position:564885:1
position: 564885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565037:1
position: 565037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:565790-565951:1:exon

position:565790:1
position: 565790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565951:1
position: 565951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:566364-566453:1:exon

position:566364:1
position: 566364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:566453:1
position: 566453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:567509-567610:1:exon

position:567509:1
position: 567509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567610:1
position: 567610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:567812-567859:1:exon

position:567812:1
position: 567812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567859:1
position: 567859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:570972-571110:1:exon

position:570972:1
position: 570972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CFAP70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CFAP70
product: cilia and flagella associated protein 70, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031555805.1
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(548325..548410,548763..548861,549119..549198,550215..550391,550729..550911,551366..551457,552525..552624,553582..553716,555008..555175,555403..555483,555986..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,563598..563708,564114..564202,564885..565037,566364..566453,567509..567610,567812..567859,570972..571110)
location: region:548325-571110:1
so has part: feature:548325-548410:1:exon
so has part: feature:548763-548861:1:exon
so has part: feature:549119-549198:1:exon
so has part: feature:550215-550391:1:exon
so has part: feature:550729-550911:1:exon
so has part: feature:551366-551457:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555986-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:563598-563708:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571110:1:exon

position:548325:1
position: 548325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548325-548410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548763-548861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549119-549198:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550215-550391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550729-550911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551366-551457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555986-556077:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:563598-563708:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:570972-571110:1:exon

CFAP70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CFAP70
product: cilia and flagella associated protein 70, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031555804.1
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(548325..548410,548763..548861,549119..549198,550215..550391,550729..550911,551366..551457,552525..552624,553582..553716,555008..555175,555403..555483,555986..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,564114..564202,564885..565037,565790..565951,566364..566453,567509..567610,567812..567859,570972..571110)
location: region:548325-571110:1
so has part: feature:548325-548410:1:exon
so has part: feature:548763-548861:1:exon
so has part: feature:549119-549198:1:exon
so has part: feature:550215-550391:1:exon
so has part: feature:550729-550911:1:exon
so has part: feature:551366-551457:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555986-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:565790-565951:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548325-548410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548763-548861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549119-549198:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550215-550391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550729-550911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551366-551457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555986-556077:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:565790-565951:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:570972-571110:1:exon

CFAP70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CFAP70
product: cilia and flagella associated protein 70, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031555803.1
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(548325..548410,548763..548861,549119..549198,550215..550391,550729..550911,551366..551457,552525..552624,553582..553716,555008..555175,555403..555483,555989..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,563598..563708,564114..564202,564885..565037,565790..565951,566364..566453,567509..567610,567812..567859,570972..571110)
location: region:548325-571110:1
so has part: feature:548325-548410:1:exon
so has part: feature:548763-548861:1:exon
so has part: feature:549119-549198:1:exon
so has part: feature:550215-550391:1:exon
so has part: feature:550729-550911:1:exon
so has part: feature:551366-551457:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555989-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:563598-563708:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:565790-565951:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:548325-548410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:548763-548861:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549119-549198:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550215-550391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:550729-550911:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551366-551457:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:555989-556077:1:exon

position:555989:1
position: 555989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:563598-563708:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:565790-565951:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:570972-571110:1:exon

CFAP70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CFAP70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 70 isoform X4
translation: MPLGQAVLDLLPLLQGQCSFTVLAPLYAVSTSPSESLHPEAKCALEVSVCTKKPLLSASQLSDGNFLSVTLEAAYSVPEAFVPTGPLQNYMACLQVPAVGKKEVPLLFMNGILKLGGEKEALPRPKKWSLANIMAPGALNIPNSFILGGPYEDEDGELNKTKDRKFRIQAESMQRIVWDTEKRCYLDPAAVLILKKRIAECQYWPVEVCRMPVTSSSKGKTSKADKGDEDRQIFFHGVAYVNMMPLLCPGVKRIRGAFRVFAYQDSEVLEKTKRQQSVLRDLRPQISLIKEGLGTPGTSSSLSRAVPSKAQREDKEKMTREQEFYRRTSSAPKIQSSDVAEEAASVTSLSLDGKQYVEAGTFLVMEIKLDKALVPKRLQEELTKRVKEMIPPRPPLPPRTGGAKKAVEDYHKHIASIAVAILSEYHELFGKQPPDQGATDHQILEEQKRQLNFELNSSGKYFAFKEQLKYAVVKIVREKYLKTTAFETQEQFQAFLSELYVYLVDQMHVALNQLLYEEASSPAPRIRMTDEQLWLFAREAEVNKDYKLASLYHQQRIAQDQHNIQYWLDYGAFCLLLEDTLKAQECFREALSLNPHHVRSLLLCGIVAVMLQHYEEAEIFFEDACCLEPSSIVAWTLSGLFCELQNDYIQAEMAFREAKKKLQAQQARERSISGEGRKQTSATSVRSSSLRPEQLLPEGVPDGSANELPETGQEPALASMAPEEEAPASETASEDASPVSGRRESPCTIFMKAVEFLMKFNAIQFVHMALAHELLSQQGSPSSAYYLTLAQTCLLKEEFSKCEECLCEAIRIDFLNPNVWAQKGHLCYLRRDLQEAKECYERTVNFVEDAADMHFVYLHLGSIYLEDKEYGKAKQIYLQACKSSASCLTWLGVGIACYRLEEMVEAEDALSEANALNNSNAEVWAYLALVCLQGGRQLEAEQCYKYATKLGLEDSTLLQELHAAQQRFGFGDPSF
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(548816..548861,549119..549198,550215..550391,550729..550911,551366..551457,552525..552624,553582..553716,555008..555175,555403..555483,555986..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,563598..563708,564114..564202,564885..565037,565790..565951,566364..566453,567509..567610,567812..567859,570972..571052)
location: region:548816-571052:1
so has part: feature:548816-548861:1:exon
so has part: feature:549119-549198:1:exon
so has part: feature:550215-550391:1:exon
so has part: feature:550729-550911:1:exon
so has part: feature:551366-551457:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555986-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:563598-563708:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:565790-565951:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571052:1:exon

XP_031411666.1
type: Protein
SIO_000068: ncbiprotein

position:548816:1
position: 548816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571052:1
position: 571052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548816-548861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:549119-549198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550215-550391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550729-550911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551366-551457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555986-556077:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:563598-563708:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:565790-565951:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:570972-571052:1:exon

CFAP70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CFAP70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 70 isoform X3
translation: MPLGQAVLDLLPLLQGQCSFTVLAPLYAVSTSPSESLHPEAKCALEVSVCTKKPLLSASQLSDGNFLSVTLEAAYSVPEAFVPTGPLQNYMACLQVPAVGKKEVPLLFMNGILKLGGEKEALPRPKKWSLANIMAPGALNIPNSFILGGPYEDEDGELNKTKDRKFRIQAESMQRIVWDTEKRCYLDPAAVLILKKRIAECQYWPVEVCRMPVTSSSKGKTSKADKGDEDRQIFFHGVAYVNMMPLLCPGVKRIRGAFRVFAYQDSEVLEKTKRQQSVLRDLRPQISLIKEGLGTPGTSSSLSRAVPSKAQREDKEKMTREQEFYRRTSSAPKIQSSDVAEEAASVTSLSLDGKQYVEAGTFLVMEIKLDKALVPKRLQEELTKRVKEMIPPRPPLPPRTGGAKKAVEDYHKHIASIAVAILSEYHELFGKQPPDQGATDHQILEEQKRQLNFELNSSGKYFAFKEQLKYAVVKIVREKYLKTTAFETQEQFQAFLSELYVYLVDQMHVALNQLLYEEASSPAPRIRMTDEQLWLFAREAEVNKDYKLASLYHQQRIAQDQHNIQYWLDYGAFCLLLEDTLKAQECFREALSLNPHHVRSLLLCGIVAVMLQHYEEAEIFFEDACCLEPSSIVAWTLSGLFCELQNDYIQAEMAFREAKKKLQAQQARERSISGEGRKQTSATSVRSSSLRPEQLLPEGVPDGSANELPETGQEPALASMAPEEEAPASETASEDASPVSGRRESPCTIFMKAVEFLMKFNAIQFVHMALAHELLSQQGSPSSAYYLTLAQTCLLKEEFSKCEECLCEAIRIDFLYGKAKQIYLQACKSSASCLTWLGVGIACYRLEEMVEAEDALSEANALNNSNAEVWAYLALVCLQGGRQLEAEQCYKYATKLGLEDSTLLQELHAAQQRFGFGDPSF
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(548816..548861,549119..549198,550215..550391,550729..550911,551366..551457,552525..552624,553582..553716,555008..555175,555403..555483,555986..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,563598..563708,564114..564202,564885..565037,566364..566453,567509..567610,567812..567859,570972..571052)
location: region:548816-571052:1
so has part: feature:548816-548861:1:exon
so has part: feature:549119-549198:1:exon
so has part: feature:550215-550391:1:exon
so has part: feature:550729-550911:1:exon
so has part: feature:551366-551457:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555986-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:563598-563708:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571052:1:exon

XP_031411665.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548816-548861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:549119-549198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550215-550391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550729-550911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551366-551457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555986-556077:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:563598-563708:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:570972-571052:1:exon

CFAP70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CFAP70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 70 isoform X2
translation: MPLGQAVLDLLPLLQGQCSFTVLAPLYAVSTSPSESLHPEAKCALEVSVCTKKPLLSASQLSDGNFLSVTLEAAYSVPEAFVPTGPLQNYMACLQVPAVGKKEVPLLFMNGILKLGGEKEALPRPKKWSLANIMAPGALNIPNSFILGGPYEDEDGELNKTKDRKFRIQAESMQRIVWDTEKRCYLDPAAVLILKKRIAECQYWPVEVCRMPVTSSSKGKTSKADKGDEDRQIFFHGVAYVNMMPLLCPGVKRIRGAFRVFAYQDSEVLEKTKRQQSVLRDLRPQISLIKEGLGTPGTSSSLSRAVPSKAQREDKEKMTREQEFYRRTSSAPKIQSSDVAEEAASVTSLSLDGKQYVEAGTFLVMEIKLDKALVPKRLQEELTKRVKEMIPPRPPLPPRTGGAKKAVEDYHKHIASIAVAILSEYHELFGKQPPDQGATDHQILEEQKRQLNFELNSSGKYFAFKEQLKYAVVKIVREKYLKTTAFETQEQFQAFLSELYVYLVDQMHVALNQLLYEEASSPAPRIRMTDEQLWLFAREAEVNKDYKLASLYHQQRIAQDQHNIQYWLDYGAFCLLLEDTLKAQECFREALSLNPHHVRSLLLCGIVAVMLQHYEEAEIFFEDACCLEPSSIVAWTLSGLFCELQNDYIQAEMAFREAKKKLQAQQARERSISGEGRKQTSATSVRSSSLRPEQLLPDASPVSGRRESPCTIFMKAVEFLMKFNAIQFVHMALAHELLSQQGSPSSAYYLTLAQTCLLKEEFSKCEECLCEAIRIDFLNPNVWAQKGHLCYLRRDLQEAKECYERTVNFVEDAADMHFVYLHLGSIYLEDKEYGKAKQIYLQACKSSASCLTWLGVGIACYRLEEMVEAEDALSEANALNNSNAEVWAYLALVCLQGGRQLEAEQCYKYATKLGLEDSTLLQELHAAQQRFGFGDPSF
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(548816..548861,549119..549198,550215..550391,550729..550911,551366..551457,552525..552624,553582..553716,555008..555175,555403..555483,555986..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,564114..564202,564885..565037,565790..565951,566364..566453,567509..567610,567812..567859,570972..571052)
location: region:548816-571052:1
so has part: feature:548816-548861:1:exon
so has part: feature:549119-549198:1:exon
so has part: feature:550215-550391:1:exon
so has part: feature:550729-550911:1:exon
so has part: feature:551366-551457:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555986-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:565790-565951:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571052:1:exon

XP_031411664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548816-548861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:549119-549198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550215-550391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550729-550911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551366-551457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555986-556077:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:565790-565951:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:570972-571052:1:exon

CFAP70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CFAP70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 70 isoform X1
translation: MPLGQAVLDLLPLLQGQCSFTVLAPLYAVSTSPSESLHPEAKCALEVSVCTKKPLLSASQLSDGNFLSVTLEAAYSVPEAFVPTGPLQNYMACLQVPAVGKKEVPLLFMNGILKLGGEKEALPRPKKWSLANIMAPGALNIPNSFILGGPYEDEDGELNKTKDRKFRIQAESMQRIVWDTEKRCYLDPAAVLILKKRIAECQYWPVEVCRMPVTSSSKGKTSKADKGDEDRQIFFHGVAYVNMMPLLCPGVKRIRGAFRVFAYQDSEVLEKTKRQQSVLRDLRPQISLIKEGLGTPGTSSSLSRAVPSKAQREDKEKMTREQEFYRRTSSAPKIQSSDVAEEAASVTSLSLDGKYVEAGTFLVMEIKLDKALVPKRLQEELTKRVKEMIPPRPPLPPRTGGAKKAVEDYHKHIASIAVAILSEYHELFGKQPPDQGATDHQILEEQKRQLNFELNSSGKYFAFKEQLKYAVVKIVREKYLKTTAFETQEQFQAFLSELYVYLVDQMHVALNQLLYEEASSPAPRIRMTDEQLWLFAREAEVNKDYKLASLYHQQRIAQDQHNIQYWLDYGAFCLLLEDTLKAQECFREALSLNPHHVRSLLLCGIVAVMLQHYEEAEIFFEDACCLEPSSIVAWTLSGLFCELQNDYIQAEMAFREAKKKLQAQQARERSISGEGRKQTSATSVRSSSLRPEQLLPEGVPDGSANELPETGQEPALASMAPEEEAPASETASEDASPVSGRRESPCTIFMKAVEFLMKFNAIQFVHMALAHELLSQQGSPSSAYYLTLAQTCLLKEEFSKCEECLCEAIRIDFLNPNVWAQKGHLCYLRRDLQEAKECYERTVNFVEDAADMHFVYLHLGSIYLEDKEYGKAKQIYLQACKSSASCLTWLGVGIACYRLEEMVEAEDALSEANALNNSNAEVWAYLALVCLQGGRQLEAEQCYKYATKLGLEDSTLLQELHAAQQRFGFGDPSF
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(548816..548861,549119..549198,550215..550391,550729..550911,551366..551457,552525..552624,553582..553716,555008..555175,555403..555483,555989..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,563598..563708,564114..564202,564885..565037,565790..565951,566364..566453,567509..567610,567812..567859,570972..571052)
location: region:548816-571052:1
so has part: feature:548816-548861:1:exon
so has part: feature:549119-549198:1:exon
so has part: feature:550215-550391:1:exon
so has part: feature:550729-550911:1:exon
so has part: feature:551366-551457:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555989-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:563598-563708:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:565790-565951:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571052:1:exon

XP_031411663.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:548816-548861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:549119-549198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:550215-550391:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:550729-550911:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:551366-551457:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:555989-556077:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:563598-563708:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:565790-565951:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:570972-571052:1:exon

CFAP70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CFAP70
product: cilia and flagella associated protein 70, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031555807.1
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(550826..550911,551371..551457,552525..552624,553582..553716,555008..555175,555403..555483,555986..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,563598..563708,564114..564202,564885..565037,565790..565951,566364..566453,567509..567610,567812..567859,570972..571110)
location: region:550826-571110:1
so has part: feature:550826-550911:1:exon
so has part: feature:551371-551457:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555986-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:563598-563708:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:565790-565951:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571110:1:exon

position:550826:1
position: 550826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550826-550911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551371-551457:1:exon

position:551371:1
position: 551371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555986-556077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:563598-563708:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:565790-565951:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:570972-571110:1:exon

CFAP70
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CFAP70
product: cilia and flagella associated protein 70, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031555808.1
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(550833..550911,552525..552624,553582..553716,555008..555175,555403..555483,555986..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,563598..563708,564114..564202,564885..565037,565790..565951,566364..566453,567509..567610,567812..567859,570972..571110)
location: region:550833-571110:1
so has part: feature:550833-550911:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555986-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:563598-563708:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:565790-565951:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571110:1:exon

position:550833:1
position: 550833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550833-550911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555986-556077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:563598-563708:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:565790-565951:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:570972-571110:1:exon

CFAP70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CFAP70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 70 isoform X5
translation: MRMRMESSTRQRKFRIQAESMQRIVWDTEKRCYLDPAAVLILKKRIAECQYWPVEVCRMPVTSSSKGKTSKADKGDEDRQIFFHGVAYVNMMPLLCPGVKRIRGAFRVFAYQDSEVLEKTKRQQSVLRDLRPQISLIKEGLGTPGTSSSLSRAVPSKAQREDKEKMTREQEFYRRTSSAPKIQSSDVAEEAASVTSLSLDGKQYVEAGTFLVMEIKLDKALVPKRLQEELTKRVKEMIPPRPPLPPRTGGAKKAVEDYHKHIASIAVAILSEYHELFGKQPPDQGATDHQILEEQKRQLNFELNSSGKYFAFKEQLKYAVVKIVREKYLKTTAFETQEQFQAFLSELYVYLVDQMHVALNQLLYEEASSPAPRIRMTDEQLWLFAREAEVNKDYKLASLYHQQRIAQDQHNIQYWLDYGAFCLLLEDTLKAQECFREALSLNPHHVRSLLLCGIVAVMLQHYEEAEIFFEDACCLEPSSIVAWTLSGLFCELQNDYIQAEMAFREAKKKLQAQQARERSISGEGRKQTSATSVRSSSLRPEQLLPEGVPDGSANELPETGQEPALASMAPEEEAPASETASEDASPVSGRRESPCTIFMKAVEFLMKFNAIQFVHMALAHELLSQQGSPSSAYYLTLAQTCLLKEEFSKCEECLCEAIRIDFLNPNVWAQKGHLCYLRRDLQEAKECYERTVNFVEDAADMHFVYLHLGSIYLEDKEYGKAKQIYLQACKSSASCLTWLGVGIACYRLEEMVEAEDALSEANALNNSNAEVWAYLALVCLQGGRQLEAEQCYKYATKLGLEDSTLLQELHAAQQRFGFGDPSF
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(550877..550911,551371..551457,552525..552624,553582..553716,555008..555175,555403..555483,555986..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,563598..563708,564114..564202,564885..565037,565790..565951,566364..566453,567509..567610,567812..567859,570972..571052)
location: region:550877-571052:1
so has part: feature:550877-550911:1:exon
so has part: feature:551371-551457:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555986-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:563598-563708:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:565790-565951:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571052:1:exon

XP_031411667.1
type: Protein
SIO_000068: ncbiprotein

position:550877:1
position: 550877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550877-550911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:551371-551457:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:555986-556077:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:563598-563708:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:565790-565951:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:570972-571052:1:exon

CFAP70
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CFAP70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cilia- and flagella-associated protein 70 isoform X6
translation: MRMRMESSTRQSLKKRIAECQYWPVEVCRMPVTSSSKGKTSKADKGDEDRQIFFHGVAYVNMMPLLCPGVKRIRGAFRVFAYQDSEVLEKTKRQQSVLRDLRPQISLIKEGLGTPGTSSSLSRAVPSKAQREDKEKMTREQEFYRRTSSAPKIQSSDVAEEAASVTSLSLDGKQYVEAGTFLVMEIKLDKALVPKRLQEELTKRVKEMIPPRPPLPPRTGGAKKAVEDYHKHIASIAVAILSEYHELFGKQPPDQGATDHQILEEQKRQLNFELNSSGKYFAFKEQLKYAVVKIVREKYLKTTAFETQEQFQAFLSELYVYLVDQMHVALNQLLYEEASSPAPRIRMTDEQLWLFAREAEVNKDYKLASLYHQQRIAQDQHNIQYWLDYGAFCLLLEDTLKAQECFREALSLNPHHVRSLLLCGIVAVMLQHYEEAEIFFEDACCLEPSSIVAWTLSGLFCELQNDYIQAEMAFREAKKKLQAQQARERSISGEGRKQTSATSVRSSSLRPEQLLPEGVPDGSANELPETGQEPALASMAPEEEAPASETASEDASPVSGRRESPCTIFMKAVEFLMKFNAIQFVHMALAHELLSQQGSPSSAYYLTLAQTCLLKEEFSKCEECLCEAIRIDFLNPNVWAQKGHLCYLRRDLQEAKECYERTVNFVEDAADMHFVYLHLGSIYLEDKEYGKAKQIYLQACKSSASCLTWLGVGIACYRLEEMVEAEDALSEANALNNSNAEVWAYLALVCLQGGRQLEAEQCYKYATKLGLEDSTLLQELHAAQQRFGFGDPSF
SIO_010081: CFAP70
subclass of: SO_0000673
so part of: CFAP70
location: join(550877..550911,552525..552624,553582..553716,555008..555175,555403..555483,555986..556077,558709..558769,559851..560042,560657..560788,561427..561552,562058..562191,562269..562384,562545..562721,563598..563708,564114..564202,564885..565037,565790..565951,566364..566453,567509..567610,567812..567859,570972..571052)
location: region:550877-571052:1
so has part: feature:550877-550911:1:exon
so has part: feature:552525-552624:1:exon
so has part: feature:553582-553716:1:exon
so has part: feature:555008-555175:1:exon
so has part: feature:555403-555483:1:exon
so has part: feature:555986-556077:1:exon
so has part: feature:558709-558769:1:exon
so has part: feature:559851-560042:1:exon
so has part: feature:560657-560788:1:exon
so has part: feature:561427-561552:1:exon
so has part: feature:562058-562191:1:exon
so has part: feature:562269-562384:1:exon
so has part: feature:562545-562721:1:exon
so has part: feature:563598-563708:1:exon
so has part: feature:564114-564202:1:exon
so has part: feature:564885-565037:1:exon
so has part: feature:565790-565951:1:exon
so has part: feature:566364-566453:1:exon
so has part: feature:567509-567610:1:exon
so has part: feature:567812-567859:1:exon
so has part: feature:570972-571052:1:exon

XP_031411668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:550877-550911:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552525-552624:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553582-553716:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:555008-555175:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:555403-555483:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:555986-556077:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:558709-558769:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:559851-560042:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:560657-560788:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:561427-561552:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:562058-562191:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:562269-562384:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:562545-562721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:563598-563708:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:564114-564202:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:564885-565037:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:565790-565951:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:566364-566453:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:567509-567610:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:567812-567859:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:570972-571052:1:exon

MSS51
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MSS51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(571939..575198)
location: region:571939-575198:-1
so has part: feature:571939-575198:-1:exon
subclass of: SO_0000010

100545033
type: Gene
SIO_000068: ncbigene

position:571939:-1
position: 571939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575198:-1
position: 575198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571939-575198:-1:exon

MSS51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MSS51
product: MSS51 mitochondrial translational activator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019620674.2
SIO_010081: MSS51
subclass of: SO_0000673
so part of: MSS51
location: complement(join(571939..572461,572559..572652,573024..573587,573772..573896,574106..574261,574467..574543,575065..575198))
location: region:571939-575198:-1
so has part: feature:575065-575198:-1:exon
so has part: feature:574467-574543:-1:exon
so has part: feature:574106-574261:-1:exon
so has part: feature:573772-573896:-1:exon
so has part: feature:573024-573587:-1:exon
so has part: feature:572559-572652:-1:exon
so has part: feature:571939-572461:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:575065-575198:-1:exon

position:575065:-1
position: 575065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:574467-574543:-1:exon

position:574467:-1
position: 574467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574543:-1
position: 574543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:574106-574261:-1:exon

position:574106:-1
position: 574106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574261:-1
position: 574261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:573772-573896:-1:exon

position:573772:-1
position: 573772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573896:-1
position: 573896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:573024-573587:-1:exon

position:573024:-1
position: 573024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573587:-1
position: 573587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:572559-572652:-1:exon

position:572559:-1
position: 572559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572652:-1
position: 572652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:571939-572461:-1:exon

position:572461:-1
position: 572461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MSS51
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MSS51
product: MSS51 mitochondrial translational activator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_003210782.4
SIO_010081: MSS51
subclass of: SO_0000673
so part of: MSS51
location: complement(join(571939..572461,572559..572652,573024..573587,573772..573896,574106..574261,574467..574780))
location: region:571939-574780:-1
so has part: feature:574467-574780:-1:exon
so has part: feature:574106-574261:-1:exon
so has part: feature:573772-573896:-1:exon
so has part: feature:573024-573587:-1:exon
so has part: feature:572559-572652:-1:exon
so has part: feature:571939-572461:-1:exon

position:574780:-1
position: 574780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574467-574780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574106-574261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573772-573896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573024-573587:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572559-572652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:571939-572461:-1:exon

MSS51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MSS51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein MSS51 homolog, mitochondrial isoform X2
translation: MRILFPALAVAKAMDSNVPGLSNVILQKLNMKSYEDYKSAMDGRKKGSDFGIRTYFDMFQKMEDTFKFCAECKKLPDALPDPRSLRRCKRCQNVYYCSVACQRANWPVHKKFCKKLKLVALDRLVEWLIFTGDIPFPTETWTKPAGDVAGWEDWFSMQEQLEEKLDAVLAGRYMSLLWANAGKPRPEEGELRESVRRLVTDFHSRPLTIGLGLRLFGIDPLAKPLTIHVVGASHVETLNTRVTDYDELARMFPGQQGMEVVMVGVDVVDGPIMRPPLATSGPPGRIYLSSYKGLYHDFWEDQVETKLAARPDLVVGFHPGFHACHDLMAGWLPTLLLLRDYCLPTLFTVYSEQELKSSLQILVELETCVTGYAANPFASLRPEQVYSSPNKAPVYCSSHYITLLGPATSLRELDGDSDDD
SIO_010081: MSS51
subclass of: SO_0000673
so part of: MSS51
location: complement(join(572251..572461,572559..572652,573024..573587,573772..573896,574106..574261,574467..574543,575065..575100))
location: region:572251-575100:-1
so has part: feature:575065-575100:-1:exon
so has part: feature:574467-574543:-1:exon
so has part: feature:574106-574261:-1:exon
so has part: feature:573772-573896:-1:exon
so has part: feature:573024-573587:-1:exon
so has part: feature:572559-572652:-1:exon
so has part: feature:572251-572461:-1:exon

XP_019476219.1
type: Protein
SIO_000068: ncbiprotein

position:572251:-1
position: 572251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575100:-1
position: 575100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575065-575100:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574467-574543:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:574106-574261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573772-573896:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:573024-573587:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572559-572652:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:572251-572461:-1:exon

MSS51
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MSS51
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein MSS51 homolog, mitochondrial isoform X1
translation: MAQRGRGAARKASKKSAKEPAAARAPDMDSLGFQAMDSNVPGLSNVILQKLNMKSYEDYKSAMDGRKKGSDFGIRTYFDMFQKMEDTFKFCAECKKLPDALPDPRSLRRCKRCQNVYYCSVACQRANWPVHKKFCKKLKLVALDRLVEWLIFTGDIPFPTETWTKPAGDVAGWEDWFSMQEQLEEKLDAVLAGRYMSLLWANAGKPRPEEGELRESVRRLVTDFHSRPLTIGLGLRLFGIDPLAKPLTIHVVGASHVETLNTRVTDYDELARMFPGQQGMEVVMVGVDVVDGPIMRPPLATSGPPGRIYLSSYKGLYHDFWEDQVETKLAARPDLVVGFHPGFHACHDLMAGWLPTLLLLRDYCLPTLFTVYSEQELKSSLQILVELETCVTGYAANPFASLRPEQVYSSPNKAPVYCSSHYITLLGPATSLRELDGDSDDD
SIO_010081: MSS51
subclass of: SO_0000673
so part of: MSS51
location: complement(join(572251..572461,572559..572652,573024..573587,573772..573896,574106..574261,574467..574645))
location: region:572251-574645:-1
so has part: feature:574467-574645:-1:exon
so has part: feature:574106-574261:-1:exon
so has part: feature:573772-573896:-1:exon
so has part: feature:573024-573587:-1:exon
so has part: feature:572559-572652:-1:exon
so has part: feature:572251-572461:-1:exon

XP_003210830.2
type: Protein
SIO_000068: ncbiprotein

position:574645:-1
position: 574645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:574467-574645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574106-574261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:573772-573896:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:573024-573587:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572559-572652:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:572251-572461:-1:exon

LOC100544881
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 577173..>580590
location: region:577173-580590:1
so has part: feature:577173-580590:1:exon
subclass of: SO_0000010

100544881
type: Gene
SIO_000068: ncbigene

position:577173:1
position: 577173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580590:1
position: 580590
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577173-580590:1:exon

LOC100544881
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544881
product: cytoplasmic phosphatidylinositol transfer protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 153 samples with support for all annotated introns
transcript id: XM_003210781.4
SIO_010081: LOC100544881
subclass of: SO_0000673
so part of: LOC100544881
location: join(577173..577831,577988..578136,578953..579041,579162..579169,579262..579333,579447..579542,579615..579770,579835..579898,580508..>580590)
location: region:577173-580590:1
so has part: feature:577173-577831:1:exon
so has part: feature:577988-578136:1:exon
so has part: feature:578953-579041:1:exon
so has part: feature:579162-579169:1:exon
so has part: feature:579262-579333:1:exon
so has part: feature:579447-579542:1:exon
so has part: feature:579615-579770:1:exon
so has part: feature:579835-579898:1:exon
so has part: feature:580508-580590:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:577173-577831:1:exon

position:577831:1
position: 577831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577988-578136:1:exon

position:577988:1
position: 577988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578136:1
position: 578136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:578953-579041:1:exon

position:578953:1
position: 578953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579041:1
position: 579041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579162-579169:1:exon

position:579162:1
position: 579162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579169:1
position: 579169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:579262-579333:1:exon

position:579262:1
position: 579262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579333:1
position: 579333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:579447-579542:1:exon

position:579447:1
position: 579447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579542:1
position: 579542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:579615-579770:1:exon

position:579615:1
position: 579615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579770:1
position: 579770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:579835-579898:1:exon

position:579835:1
position: 579835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579898:1
position: 579898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:580508-580590:1:exon

position:580508:1
position: 580508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100544881
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544881
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic phosphatidylinositol transfer protein 1-like
translation: MLVKEYRICMPLTTEEYRVGQLYTISKHSHQESEKGEGVEVVRNEPHEDPVHGPGQFTEKRVHLSSKLPSWARAVTPRIFYITEKAWNYYPYTITEYTCSFLPKFSIYIETKYEDNCGDSENIFHGDKILGDHEVSFLDIAFDEIPERYYRSLEDPRFFSSAKTGRGPLREGWRQHTKPIMCSYKLVTVKFEVWGLQTRVEQFVHKVIRDILLIGHRQAFTWVDEWCGMTMEEVRRYERETQEATNEIIGLVAPT
SIO_010081: LOC100544881
subclass of: SO_0000673
so part of: LOC100544881
location: join(577784..577831,577988..578136,578953..579041,579162..579169,579262..579333,579447..579542,579615..579770,579835..579898,580508..>580590)
location: region:577784-580590:1
so has part: feature:577784-577831:1:exon
so has part: feature:577988-578136:1:exon
so has part: feature:578953-579041:1:exon
so has part: feature:579162-579169:1:exon
so has part: feature:579262-579333:1:exon
so has part: feature:579447-579542:1:exon
so has part: feature:579615-579770:1:exon
so has part: feature:579835-579898:1:exon
so has part: feature:580508-580590:1:exon

XP_003210829.2
type: Protein
SIO_000068: ncbiprotein

position:577784:1
position: 577784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:577784-577831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577988-578136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578953-579041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579162-579169:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579262-579333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579447-579542:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579615-579770:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579835-579898:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:580508-580590:1:exon

MYADM
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MYADM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 580702..582008
location: region:580702-582008:1
so has part: feature:580702-582008:1:exon
subclass of: SO_0000010

104913348
type: Gene
SIO_000068: ncbigene

position:580702:1
position: 580702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582008:1
position: 582008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580702-582008:1:exon

MYADM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MYADM
product: myeloid associated differentiation marker
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010719340.3
SIO_010081: MYADM
subclass of: SO_0000673
so part of: MYADM
location: 580702..582008
location: region:580702-582008:1
so has part: feature:580702-582008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580702-582008:1:exon

MYADM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MYADM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myeloid-associated differentiation marker
translation: MAVVSVNWRAVTSWVGIARLFAVLLSCLSFSLVASTGNFGGSYGTWCMFSWCFCFAITLLVLLLELLELSSKLPVSWDDLTAAFAMLAALLVFTSSVVFPSTFISSPCTGARCARQAAATAMSCLCFLAYALEVGLTRARPGDISSFLSTVPGLLKVFEAYIACLIFSLLNSYDSYAGLQWCVAVYSICFIITLLIILLTIGRCLSYMPCPLEKVLVAYNALALLMYLTAVIIWPLYNFNGRSRPNNCGTNCWWDKSLGVTFLTIFNFLAYLVDLVYSTKMVFIRAPS
SIO_010081: MYADM
subclass of: SO_0000673
so part of: MYADM
location: 580988..581854
location: region:580988-581854:1
so has part: feature:580988-581854:1:exon

XP_010717642.1
type: Protein
SIO_000068: ncbiprotein

position:580988:1
position: 580988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581854:1
position: 581854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580988-581854:1:exon

LOC100544729
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 586034..591353
location: region:586034-591353:1
so has part: feature:586034-591353:1:exon
subclass of: SO_0000010

100544729
type: Gene
SIO_000068: ncbigene

position:586034:1
position: 586034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591353:1
position: 591353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586034-591353:1:exon

LOC100544729
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544729
product: septin-12, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
transcript id: XM_010719344.2
SIO_010081: LOC100544729
subclass of: SO_0000673
so part of: LOC100544729
location: join(586034..586468,589034..589207,589483..589611,589737..589818,589898..590035,590116..590233,590315..590410,590485..590581,590733..590784,590901..591353)
location: region:586034-591353:1
so has part: feature:586034-586468:1:exon
so has part: feature:589034-589207:1:exon
so has part: feature:589483-589611:1:exon
so has part: feature:589737-589818:1:exon
so has part: feature:589898-590035:1:exon
so has part: feature:590116-590233:1:exon
so has part: feature:590315-590410:1:exon
so has part: feature:590485-590581:1:exon
so has part: feature:590733-590784:1:exon
so has part: feature:590901-591353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586034-586468:1:exon

position:586468:1
position: 586468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589034-589207:1:exon

position:589034:1
position: 589034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589207:1
position: 589207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:589483-589611:1:exon

position:589483:1
position: 589483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589611:1
position: 589611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:589737-589818:1:exon

position:589737:1
position: 589737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:589818:1
position: 589818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:589898-590035:1:exon

position:589898:1
position: 589898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590035:1
position: 590035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:590116-590233:1:exon

position:590116:1
position: 590116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590233:1
position: 590233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:590315-590410:1:exon

position:590315:1
position: 590315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590410:1
position: 590410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:590485-590581:1:exon

position:590485:1
position: 590485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590581:1
position: 590581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:590733-590784:1:exon

position:590733:1
position: 590733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:590784:1
position: 590784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:590901-591353:1:exon

position:590901:1
position: 590901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100544729
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544729
product: septin-12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010719342.3
SIO_010081: LOC100544729
subclass of: SO_0000673
so part of: LOC100544729
location: join(587382..587979,589034..589207,589483..589611,589737..589818,589898..590035,590116..590233,590315..590410,590485..590581,590733..590784,590901..591353)
location: region:587382-591353:1
so has part: feature:587382-587979:1:exon
so has part: feature:589034-589207:1:exon
so has part: feature:589483-589611:1:exon
so has part: feature:589737-589818:1:exon
so has part: feature:589898-590035:1:exon
so has part: feature:590116-590233:1:exon
so has part: feature:590315-590410:1:exon
so has part: feature:590485-590581:1:exon
so has part: feature:590733-590784:1:exon
so has part: feature:590901-591353:1:exon

position:587382:1
position: 587382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587382-587979:1:exon

position:587979:1
position: 587979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589034-589207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589483-589611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589737-589818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589898-590035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590116-590233:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590315-590410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:590485-590581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:590733-590784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:590901-591353:1:exon

LOC100544729
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-12 isoform X1
translation: MAVPASCRPSLSGAKKWAGTYVPCREAAAWAGGRRRRRALRHRGGQCWAWGSPVPEPPMPGSSLEPQERSMESAAVPQELPPDCGVHELFGYVGIEAVLEQMKVKTMKMGFEFNIMVVGQSGLGKSTMVNTLFKSKVSRKASQPGQEERIPKTVQLQSVTHVIEEKGVKMKLTVTDTPGFGDQINNENCWDPIIKYINEQYERYLREEILITRKRKIPDSRVHGCVYFIPPTGHWLRPLDLEFMRRLSKIVNVVPVIAKADTLTLEEREEFKQRIQRDLKAHAISVYPQEDFDEDPDDRLLNDRIREKIPFAVVGADQEHQVNGKRVLGRKTKWGIIEVENPAHCEFPMLRDLLIRSHLQDLKDITHNVHYESYRVRRLNESNRPAPSSNNGLPGRDEDGDESNL
SIO_010081: LOC100544729
subclass of: SO_0000673
so part of: LOC100544729
location: join(587799..587979,589034..589207,589483..589611,589737..589818,589898..590035,590116..590233,590315..590410,590485..590581,590733..590784,590901..591051)
location: region:587799-591051:1
so has part: feature:587799-587979:1:exon
so has part: feature:589034-589207:1:exon
so has part: feature:589483-589611:1:exon
so has part: feature:589737-589818:1:exon
so has part: feature:589898-590035:1:exon
so has part: feature:590116-590233:1:exon
so has part: feature:590315-590410:1:exon
so has part: feature:590485-590581:1:exon
so has part: feature:590733-590784:1:exon
so has part: feature:590901-591051:1:exon

XP_010717644.2
type: Protein
SIO_000068: ncbiprotein

position:587799:1
position: 587799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:591051:1
position: 591051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:587799-587979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589034-589207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589483-589611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589737-589818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589898-590035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590116-590233:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590315-590410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:590485-590581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:590733-590784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:590901-591051:1:exon

LOC100544729
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544729
product: septin-12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010719343.2
SIO_010081: LOC100544729
subclass of: SO_0000673
so part of: LOC100544729
location: join(588007..588359,589034..589207,589483..589611,589737..589818,589898..590035,590116..590233,590315..590410,590485..590581,590733..590784,590901..591353)
location: region:588007-591353:1
so has part: feature:588007-588359:1:exon
so has part: feature:589034-589207:1:exon
so has part: feature:589483-589611:1:exon
so has part: feature:589737-589818:1:exon
so has part: feature:589898-590035:1:exon
so has part: feature:590116-590233:1:exon
so has part: feature:590315-590410:1:exon
so has part: feature:590485-590581:1:exon
so has part: feature:590733-590784:1:exon
so has part: feature:590901-591353:1:exon

position:588007:1
position: 588007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588007-588359:1:exon

position:588359:1
position: 588359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589034-589207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589483-589611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589737-589818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589898-590035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590116-590233:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590315-590410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:590485-590581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:590733-590784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:590901-591353:1:exon

LOC100544729
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544729
product: septin-12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_010719345.2
SIO_010081: LOC100544729
subclass of: SO_0000673
so part of: LOC100544729
location: join(588831..588933,589034..589207,589483..589611,589737..589818,589898..590035,590116..590233,590315..590410,590485..590581,590733..590784,590901..591353)
location: region:588831-591353:1
so has part: feature:588831-588933:1:exon
so has part: feature:589034-589207:1:exon
so has part: feature:589483-589611:1:exon
so has part: feature:589737-589818:1:exon
so has part: feature:589898-590035:1:exon
so has part: feature:590116-590233:1:exon
so has part: feature:590315-590410:1:exon
so has part: feature:590485-590581:1:exon
so has part: feature:590733-590784:1:exon
so has part: feature:590901-591353:1:exon

position:588831:1
position: 588831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:588831-588933:1:exon

position:588933:1
position: 588933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589034-589207:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589483-589611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589737-589818:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589898-590035:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590116-590233:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590315-590410:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:590485-590581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:590733-590784:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:590901-591353:1:exon

LOC100544729
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-12 isoform X2
translation: MESAAVPQELPPDCGVHELFGYVGIEAVLEQMKVKTMKMGFEFNIMVVGQSGLGKSTMVNTLFKSKVSRKASQPGQEERIPKTVQLQSVTHVIEEKGVKMKLTVTDTPGFGDQINNENCWDPIIKYINEQYERYLREEILITRKRKIPDSRVHGCVYFIPPTGHWLRPLDLEFMRRLSKIVNVVPVIAKADTLTLEEREEFKQRIQRDLKAHAISVYPQEDFDEDPDDRLLNDRIREKIPFAVVGADQEHQVNGKRVLGRKTKWGIIEVENPAHCEFPMLRDLLIRSHLQDLKDITHNVHYESYRVRRLNESNRPAPSSNNGLPGRDEDGDESNL
SIO_010081: LOC100544729
subclass of: SO_0000673
so part of: LOC100544729
location: join(589063..589207,589483..589611,589737..589818,589898..590035,590116..590233,590315..590410,590485..590581,590733..590784,590901..591051)
location: region:589063-591051:1
so has part: feature:589063-589207:1:exon
so has part: feature:589483-589611:1:exon
so has part: feature:589737-589818:1:exon
so has part: feature:589898-590035:1:exon
so has part: feature:590116-590233:1:exon
so has part: feature:590315-590410:1:exon
so has part: feature:590485-590581:1:exon
so has part: feature:590733-590784:1:exon
so has part: feature:590901-591051:1:exon

XP_010717645.1
type: Protein
SIO_000068: ncbiprotein

position:589063:1
position: 589063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:589063-589207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589483-589611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589737-589818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589898-590035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:590116-590233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590315-590410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590485-590581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:590733-590784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:590901-591051:1:exon

LOC100544729
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-12 isoform X2
translation: MESAAVPQELPPDCGVHELFGYVGIEAVLEQMKVKTMKMGFEFNIMVVGQSGLGKSTMVNTLFKSKVSRKASQPGQEERIPKTVQLQSVTHVIEEKGVKMKLTVTDTPGFGDQINNENCWDPIIKYINEQYERYLREEILITRKRKIPDSRVHGCVYFIPPTGHWLRPLDLEFMRRLSKIVNVVPVIAKADTLTLEEREEFKQRIQRDLKAHAISVYPQEDFDEDPDDRLLNDRIREKIPFAVVGADQEHQVNGKRVLGRKTKWGIIEVENPAHCEFPMLRDLLIRSHLQDLKDITHNVHYESYRVRRLNESNRPAPSSNNGLPGRDEDGDESNL
SIO_010081: LOC100544729
subclass of: SO_0000673
so part of: LOC100544729
location: join(589063..589207,589483..589611,589737..589818,589898..590035,590116..590233,590315..590410,590485..590581,590733..590784,590901..591051)
location: region:589063-591051:1
so has part: feature:589063-589207:1:exon
so has part: feature:589483-589611:1:exon
so has part: feature:589737-589818:1:exon
so has part: feature:589898-590035:1:exon
so has part: feature:590116-590233:1:exon
so has part: feature:590315-590410:1:exon
so has part: feature:590485-590581:1:exon
so has part: feature:590733-590784:1:exon
so has part: feature:590901-591051:1:exon

XP_010717646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589063-589207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589483-589611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589737-589818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589898-590035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:590116-590233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590315-590410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590485-590581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:590733-590784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:590901-591051:1:exon

LOC100544729
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-12 isoform X2
translation: MESAAVPQELPPDCGVHELFGYVGIEAVLEQMKVKTMKMGFEFNIMVVGQSGLGKSTMVNTLFKSKVSRKASQPGQEERIPKTVQLQSVTHVIEEKGVKMKLTVTDTPGFGDQINNENCWDPIIKYINEQYERYLREEILITRKRKIPDSRVHGCVYFIPPTGHWLRPLDLEFMRRLSKIVNVVPVIAKADTLTLEEREEFKQRIQRDLKAHAISVYPQEDFDEDPDDRLLNDRIREKIPFAVVGADQEHQVNGKRVLGRKTKWGIIEVENPAHCEFPMLRDLLIRSHLQDLKDITHNVHYESYRVRRLNESNRPAPSSNNGLPGRDEDGDESNL
SIO_010081: LOC100544729
subclass of: SO_0000673
so part of: LOC100544729
location: join(589063..589207,589483..589611,589737..589818,589898..590035,590116..590233,590315..590410,590485..590581,590733..590784,590901..591051)
location: region:589063-591051:1
so has part: feature:589063-589207:1:exon
so has part: feature:589483-589611:1:exon
so has part: feature:589737-589818:1:exon
so has part: feature:589898-590035:1:exon
so has part: feature:590116-590233:1:exon
so has part: feature:590315-590410:1:exon
so has part: feature:590485-590581:1:exon
so has part: feature:590733-590784:1:exon
so has part: feature:590901-591051:1:exon

XP_010717647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:589063-589207:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589483-589611:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:589737-589818:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:589898-590035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:590116-590233:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:590315-590410:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590485-590581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:590733-590784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:590901-591051:1:exon

RAB11FIP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RAB11FIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <591619..608264
location: region:591619-608264:1
so has part: feature:591619-608264:1:exon
subclass of: SO_0000010

100544572
type: Gene
SIO_000068: ncbigene

position:591619:1
position: 591619
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:608264:1
position: 608264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591619-608264:1:exon

RAB11FIP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RAB11FIP3
product: RAB11 family interacting protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_010719741.2
SIO_010081: RAB11FIP3
subclass of: SO_0000673
so part of: RAB11FIP3
location: join(<591619..591794,595154..595288,597800..597835,600173..600266,601023..601126,602088..602228,603267..603348,604186..604323,604924..605079,605460..605600,606290..608264)
location: region:591619-608264:1
so has part: feature:591619-591794:1:exon
so has part: feature:595154-595288:1:exon
so has part: feature:597800-597835:1:exon
so has part: feature:600173-600266:1:exon
so has part: feature:601023-601126:1:exon
so has part: feature:602088-602228:1:exon
so has part: feature:603267-603348:1:exon
so has part: feature:604186-604323:1:exon
so has part: feature:604924-605079:1:exon
so has part: feature:605460-605600:1:exon
so has part: feature:606290-608264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:591619-591794:1:exon

position:591794:1
position: 591794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595154-595288:1:exon

position:595154:1
position: 595154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595288:1
position: 595288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:597800-597835:1:exon

position:597800:1
position: 597800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597835:1
position: 597835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:600173-600266:1:exon

position:600173:1
position: 600173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:600266:1
position: 600266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:601023-601126:1:exon

position:601023:1
position: 601023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:601126:1
position: 601126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:602088-602228:1:exon

position:602088:1
position: 602088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:602228:1
position: 602228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:603267-603348:1:exon

position:603267:1
position: 603267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:603348:1
position: 603348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:604186-604323:1:exon

position:604186:1
position: 604186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604323:1
position: 604323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:604924-605079:1:exon

position:604924:1
position: 604924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605079:1
position: 605079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:605460-605600:1:exon

position:605460:1
position: 605460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605600:1
position: 605600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:606290-608264:1:exon

position:606290:1
position: 606290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAB11FIP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RAB11FIP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab11 family-interacting protein 3
translation: RSHPHDLPLGSDLSHSIVTVISGEEHFEDYGEGNEADLFSDSLCNGESSFSSSSFLSPSTNPLAAKLHSIIADEAFEFYCSQCHKQINRLEDLSARLNDLEMNSPNKRLSSKKVARQLHQTSTLSGGAMEESYRDTLECTEEDITDKVVFLEKRVTELEKDTAANGEQHSRLKQENLQLVHRANALEEQLKEQELRADQTLLEEIKKQREMLSKMEREKSIEIENLQARLQQLDDENSELRSCVPCLRANIERLEEEKQKLLDEIEDLTVQLTEEQENKRKMGDKLSHERHQFQKEKESTQELIEDLRKQLEHLQLFKLECEQRRGRSSSMGLQEYNSRTRETELEQEIKQLKQDNRSLKEQNDELNGQIINLSIQGAKNLFSASFSESLAAEISSVSRDELMEAIQKQEEINFRLQDYIDRIIVAIMETNPSILEVK
SIO_010081: RAB11FIP3
subclass of: SO_0000673
so part of: RAB11FIP3
location: join(<591619..591794,595154..595288,597800..597835,600173..600266,601023..601126,602088..602228,603267..603348,604186..604323,604924..605079,605460..605600,606290..606403)
location: region:591619-606403:1
so has part: feature:591619-591794:1:exon
so has part: feature:595154-595288:1:exon
so has part: feature:597800-597835:1:exon
so has part: feature:600173-600266:1:exon
so has part: feature:601023-601126:1:exon
so has part: feature:602088-602228:1:exon
so has part: feature:603267-603348:1:exon
so has part: feature:604186-604323:1:exon
so has part: feature:604924-605079:1:exon
so has part: feature:605460-605600:1:exon
so has part: feature:606290-606403:1:exon

XP_010718043.2
type: Protein
SIO_000068: ncbiprotein

position:606403:1
position: 606403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591619-591794:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:595154-595288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:597800-597835:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:600173-600266:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:601023-601126:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:602088-602228:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:603267-603348:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:604186-604323:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:604924-605079:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:605460-605600:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:606290-606403:1:exon

LOC104913349
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913349
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 616501..624938
location: region:616501-624938:1
so has part: feature:616501-624938:1:exon
subclass of: SO_0000010

104913349
type: Gene
SIO_000068: ncbigene

position:616501:1
position: 616501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624938:1
position: 624938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616501-624938:1:exon

LOC104913349
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913349
product: rab11 family-interacting protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010719346.3
SIO_010081: LOC104913349
subclass of: SO_0000673
so part of: LOC104913349
location: join(616501..616609,616764..616855,624699..624938)
location: region:616501-624938:1
so has part: feature:616501-616609:1:exon
so has part: feature:616764-616855:1:exon
so has part: feature:624699-624938:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616501-616609:1:exon

position:616609:1
position: 616609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:616764-616855:1:exon

position:616764:1
position: 616764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616855:1
position: 616855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:624699-624938:1:exon

position:624699:1
position: 624699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913349
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913349
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rab11 family-interacting protein 3-like
translation: MGYTPEEEAPACPDEFDDFVTFEANEVTDSAYMGSESTYSECETFTDEDTSTLVHHEMHDEVETDSAIDSTVHSEFTDAIEEQEQGSVGQNGAKGGR
SIO_010081: LOC104913349
subclass of: SO_0000673
so part of: LOC104913349
location: join(616787..616855,624699..624923)
location: region:616787-624923:1
so has part: feature:616787-616855:1:exon
so has part: feature:624699-624923:1:exon

XP_010717648.1
type: Protein
SIO_000068: ncbiprotein

position:616787:1
position: 616787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624923:1
position: 624923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616787-616855:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:624699-624923:1:exon

LOC109370196
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 626629..636189
location: region:626629-636189:1
so has part: feature:626629-636189:1:exon
subclass of: SO_0000010

109370196
type: Gene
SIO_000068: ncbigene

position:626629:1
position: 626629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636189:1
position: 636189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626629-636189:1:exon

LOC109370196
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109370196
product: uncharacterized LOC109370196
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_031555810.1
SIO_010081: LOC109370196
subclass of: SO_0000673
so part of: LOC109370196
location: join(626629..634064,634502..636189)
location: region:626629-636189:1
so has part: feature:626629-634064:1:exon
so has part: feature:634502-636189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:626629-634064:1:exon

position:634064:1
position: 634064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634502-636189:1:exon

position:634502:1
position: 634502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109370196
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109370196
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109370196
translation: MGLALNLALGQGAMLCTPCAAPTRVPYGEAPDRFLRVSMSNSELGEAVSHSRTWHFPVLLLPAAQLGAGSTLPALQQLGATSGMGLCCAISLLCSGCSSLLLTQIADLSLGNGVSCASSNSCTPKAFPSPTIVLFSVQLSWLCSRLVQQHLPVLSPIPQTPPRAPFHLHSGRSKTQCQELELGDLAGEIRSLDSSRKLRLSRRSSKLYLQDRSFQGQEAGSEHSPAALPCCGTGDCRKTCGLRGSEVDEHHPASCRGVIGSVFAACSPQSPVCDPPSTHGLVGVCAACCHAAGVGALLSCCRSGSRARHLLFLWVQPGVWRGENRFPLSLEGQKLGNKTFPILEGWREKNFFKFG
SIO_010081: LOC109370196
subclass of: SO_0000673
so part of: LOC109370196
location: 629516..630583
location: region:629516-630583:1
so has part: feature:629516-630583:1:exon

XP_031411670.1
type: Protein
SIO_000068: ncbiprotein

position:629516:1
position: 629516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:630583:1
position: 630583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629516-630583:1:exon

DECR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DECR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 633307..642698
location: region:633307-642698:1
so has part: feature:633307-642698:1:exon
subclass of: SO_0000010

100544413
type: Gene
SIO_000068: ncbigene

position:633307:1
position: 633307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:642698:1
position: 642698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633307-642698:1:exon

DECR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DECR2
product: 2,4-dienoyl-CoA reductase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019620598.1
SIO_010081: DECR2
subclass of: SO_0000673
so part of: DECR2
location: join(633307..633348,633971..634144,636681..636779,636890..636922,638648..638783,639135..639259,639710..639803,640091..640195,640641..640829,641581..642698)
location: region:633307-642698:1
so has part: feature:633307-633348:1:exon
so has part: feature:633971-634144:1:exon
so has part: feature:636681-636779:1:exon
so has part: feature:636890-636922:1:exon
so has part: feature:638648-638783:1:exon
so has part: feature:639135-639259:1:exon
so has part: feature:639710-639803:1:exon
so has part: feature:640091-640195:1:exon
so has part: feature:640641-640829:1:exon
so has part: feature:641581-642698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:633307-633348:1:exon

position:633348:1
position: 633348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:633971-634144:1:exon

position:633971:1
position: 633971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634144:1
position: 634144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:636681-636779:1:exon

position:636681:1
position: 636681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636779:1
position: 636779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:636890-636922:1:exon

position:636890:1
position: 636890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636922:1
position: 636922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:638648-638783:1:exon

position:638648:1
position: 638648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638783:1
position: 638783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:639135-639259:1:exon

position:639135:1
position: 639135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639259:1
position: 639259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:639710-639803:1:exon

position:639710:1
position: 639710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639803:1
position: 639803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:640091-640195:1:exon

position:640091:1
position: 640091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640195:1
position: 640195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:640641-640829:1:exon

position:640641:1
position: 640641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640829:1
position: 640829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:641581-642698:1:exon

position:641581:1
position: 641581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DECR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DECR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxisomal 2,4-dienoyl-CoA reductase
translation: MPFLWAELWGTGQEVKELTKYLDPSGLGVISFEDFHRGIRAIRNGGELGAVLLMGRAVLCVLGAVVLTVAGRDEPRLRPVFDALDRDGDGFVRVEEFVQFATAYGIAGRNQQRVAEASKKLVAATGQQCLPLSVDVRQPQTIMAAVDETLKQFKQIDILVNGAAGNFLCPASALSFNAFKTVMDIDTLGTFNTSKVLFEKYFRDHGGVIINITATLSYRGQALQVHAGSAKAAIDAMTRHLAVEWGPNNIRVNSLAPGPITGTEGFRRLGGKFAKDSNQFDTIPLQRAGNKTEIAHSALYLASPLSSYVTGTTLVVDGGSWLTSANSFSALLDVWAAGANKNQ
SIO_010081: DECR2
subclass of: SO_0000673
so part of: DECR2
location: join(633307..633348,633971..634144,636681..636779,636890..636922,638648..638783,639135..639259,639710..639803,640091..640195,640641..640829,641581..641615)
location: region:633307-641615:1
so has part: feature:633307-633348:1:exon
so has part: feature:633971-634144:1:exon
so has part: feature:636681-636779:1:exon
so has part: feature:636890-636922:1:exon
so has part: feature:638648-638783:1:exon
so has part: feature:639135-639259:1:exon
so has part: feature:639710-639803:1:exon
so has part: feature:640091-640195:1:exon
so has part: feature:640641-640829:1:exon
so has part: feature:641581-641615:1:exon

XP_019476143.1
type: Protein
SIO_000068: ncbiprotein

position:641615:1
position: 641615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633307-633348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:633971-634144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:636681-636779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:636890-636922:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:638648-638783:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:639135-639259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:639710-639803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:640091-640195:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:640641-640829:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:641581-641615:1:exon

NME4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NME4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <643179..644436
location: region:643179-644436:1
so has part: feature:643179-644436:1:exon
subclass of: SO_0000010

100544256
type: Gene
SIO_000068: ncbigene

position:643179:1
position: 643179
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:644436:1
position: 644436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643179-644436:1:exon

NME4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NME4
product: NME/NM23 nucleoside diphosphate kinase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_019620599.1
SIO_010081: NME4
subclass of: SO_0000673
so part of: NME4
location: join(<643179..643188,643703..643833,643914..644015,644092..644204,644267..644436)
location: region:643179-644436:1
so has part: feature:643179-643188:1:exon
so has part: feature:643703-643833:1:exon
so has part: feature:643914-644015:1:exon
so has part: feature:644092-644204:1:exon
so has part: feature:644267-644436:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:643179-643188:1:exon

position:643188:1
position: 643188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:643703-643833:1:exon

position:643703:1
position: 643703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:643833:1
position: 643833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:643914-644015:1:exon

position:643914:1
position: 643914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644015:1
position: 644015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:644092-644204:1:exon

position:644092:1
position: 644092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644204:1
position: 644204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:644267-644436:1:exon

position:644267:1
position: 644267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NME4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NME4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoside diphosphate kinase, mitochondrial
translation: YGSAPPELREQTLVLVKPDAVQRRLVGDVIGRFERRGFKLVAMKLLQADRSLLDRHYQHLQQKPFYPALLAYMTSGPLVAMVWEGYNVVRSTRAMVGDTDSAQAAAGTIRGDLSMHVSRNVVHASDSVETASREIGFWFQQNELVAWESGDSQYTYGP
SIO_010081: NME4
subclass of: SO_0000673
so part of: NME4
location: join(<643179..643188,643703..643833,643914..644015,644092..644204,644267..644387)
location: region:643179-644387:1
so has part: feature:643179-643188:1:exon
so has part: feature:643703-643833:1:exon
so has part: feature:643914-644015:1:exon
so has part: feature:644092-644204:1:exon
so has part: feature:644267-644387:1:exon

XP_019476144.1
type: Protein
SIO_000068: ncbiprotein

position:644387:1
position: 644387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:643179-643188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:643703-643833:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:643914-644015:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:644092-644204:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644267-644387:1:exon

XPO6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: XPO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 658977..694221
location: region:658977-694221:1
so has part: feature:658977-694221:1:exon
subclass of: SO_0000010

100544101
type: Gene
SIO_000068: ncbigene

position:658977:1
position: 658977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694221:1
position: 694221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:658977-694221:1:exon

XPO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: XPO6
product: exportin 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 217 samples with support for all annotated introns
transcript id: XM_010719348.3
SIO_010081: XPO6
subclass of: SO_0000673
so part of: XPO6
location: join(658977..659086,660400..660512,663723..663920,665977..666136,666540..666617,670150..670603,673530..673656,674449..674558,676795..676903,677629..677721,679634..679703,680767..680926,681659..681751,683507..683651,684684..684830,685466..685655,686804..686959,688265..688379,688848..689019,689444..689605,691354..691452,692493..692723,693526..694221)
location: region:658977-694221:1
so has part: feature:658977-659086:1:exon
so has part: feature:660400-660512:1:exon
so has part: feature:663723-663920:1:exon
so has part: feature:665977-666136:1:exon
so has part: feature:666540-666617:1:exon
so has part: feature:670150-670603:1:exon
so has part: feature:673530-673656:1:exon
so has part: feature:674449-674558:1:exon
so has part: feature:676795-676903:1:exon
so has part: feature:677629-677721:1:exon
so has part: feature:679634-679703:1:exon
so has part: feature:680767-680926:1:exon
so has part: feature:681659-681751:1:exon
so has part: feature:683507-683651:1:exon
so has part: feature:684684-684830:1:exon
so has part: feature:685466-685655:1:exon
so has part: feature:686804-686959:1:exon
so has part: feature:688265-688379:1:exon
so has part: feature:688848-689019:1:exon
so has part: feature:689444-689605:1:exon
so has part: feature:691354-691452:1:exon
so has part: feature:692493-692723:1:exon
so has part: feature:693526-694221:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:658977-659086:1:exon

position:659086:1
position: 659086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:660400-660512:1:exon

position:660400:1
position: 660400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:660512:1
position: 660512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:663723-663920:1:exon

position:663723:1
position: 663723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663920:1
position: 663920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:665977-666136:1:exon

position:665977:1
position: 665977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666136:1
position: 666136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:666540-666617:1:exon

position:666540:1
position: 666540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666617:1
position: 666617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:670150-670603:1:exon

position:670150:1
position: 670150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670603:1
position: 670603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:673530-673656:1:exon

position:673530:1
position: 673530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673656:1
position: 673656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:674449-674558:1:exon

position:674449:1
position: 674449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674558:1
position: 674558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:676795-676903:1:exon

position:676795:1
position: 676795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:676903:1
position: 676903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:677629-677721:1:exon

position:677629:1
position: 677629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677721:1
position: 677721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:679634-679703:1:exon

position:679634:1
position: 679634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679703:1
position: 679703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:680767-680926:1:exon

position:680767:1
position: 680767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680926:1
position: 680926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:681659-681751:1:exon

position:681659:1
position: 681659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:681751:1
position: 681751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:683507-683651:1:exon

position:683507:1
position: 683507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683651:1
position: 683651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:684684-684830:1:exon

position:684684:1
position: 684684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684830:1
position: 684830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:685466-685655:1:exon

position:685466:1
position: 685466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685655:1
position: 685655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:686804-686959:1:exon

position:686804:1
position: 686804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686959:1
position: 686959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:688265-688379:1:exon

position:688265:1
position: 688265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688379:1
position: 688379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:688848-689019:1:exon

position:688848:1
position: 688848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689019:1
position: 689019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:689444-689605:1:exon

position:689444:1
position: 689444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:689605:1
position: 689605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:691354-691452:1:exon

position:691354:1
position: 691354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691452:1
position: 691452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:692493-692723:1:exon

position:692493:1
position: 692493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692723:1
position: 692723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:693526-694221:1:exon

position:693526:1
position: 693526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XPO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: XPO6
product: exportin 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 217 samples with support for all annotated introns
transcript id: XM_031555812.1
SIO_010081: XPO6
subclass of: SO_0000673
so part of: XPO6
location: join(658977..659086,660400..660512,663723..663920,665977..666136,666540..666617,670150..670603,673530..673656,674449..674558,676795..676903,677632..677721,679634..679703,680767..680926,681659..681751,683507..683651,684684..684830,685466..685655,686804..686959,688265..688379,688848..689019,689444..689605,691354..691452,692493..692723,693526..694221)
location: region:658977-694221:1
so has part: feature:658977-659086:1:exon
so has part: feature:660400-660512:1:exon
so has part: feature:663723-663920:1:exon
so has part: feature:665977-666136:1:exon
so has part: feature:666540-666617:1:exon
so has part: feature:670150-670603:1:exon
so has part: feature:673530-673656:1:exon
so has part: feature:674449-674558:1:exon
so has part: feature:676795-676903:1:exon
so has part: feature:677632-677721:1:exon
so has part: feature:679634-679703:1:exon
so has part: feature:680767-680926:1:exon
so has part: feature:681659-681751:1:exon
so has part: feature:683507-683651:1:exon
so has part: feature:684684-684830:1:exon
so has part: feature:685466-685655:1:exon
so has part: feature:686804-686959:1:exon
so has part: feature:688265-688379:1:exon
so has part: feature:688848-689019:1:exon
so has part: feature:689444-689605:1:exon
so has part: feature:691354-691452:1:exon
so has part: feature:692493-692723:1:exon
so has part: feature:693526-694221:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:658977-659086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660400-660512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663723-663920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665977-666136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666540-666617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670150-670603:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673530-673656:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674449-674558:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676795-676903:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:677632-677721:1:exon

position:677632:1
position: 677632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:679634-679703:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680767-680926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:681659-681751:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:683507-683651:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:684684-684830:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685466-685655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:686804-686959:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:688265-688379:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:688848-689019:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:689444-689605:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:691354-691452:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:692493-692723:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693526-694221:1:exon

XPO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: XPO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-6 isoform X1
translation: MTEFFHNCTTNERKREIEELLNNFAQQIGAWRFCLYFLSSTRNDYVMMYSLTVFENLINKMWLGVPSQDKMEIRSCLPKLLLAQHKTLPYFIRNKLCKVIVDIGRQDWPMFYHDFFTNILQLIQSPVTTPLGLIMLKTTSEELACPREDLSVARKEELRKLLLDQVQTVLGLLTGILESIWDKHSVTAATPPPSPTSGESGDLLSSLLQSPSAAKLLNQPIPILDTDSEYICSLALECLAHLFSWIPLSTSITPSLLTTIFHFARFGCDTRVRKMSSVNGSSQNVGLGAERGRLGVLAMSCINELMSKNCVPMEFEEYLLRMFQQTFYLLQKITKENNAHTVKSRLEELDESYIEKFTDFLRLFVSVHLRRIESYSQFPVVEFLALLFKYTFHQPTHEGYFSCLDIWTLFLDYLTSKIKSRLADKEAVLNRYEDALVLLLTEVLNRIQFRYNQAQLEELDDETLDDDQQTEWQRYLRQSLEVVAKVMELLPTHAFSTLFPVLQDNLEVYLGLQQFVVTSGTGHRLNITAENDCRRLHCSLRDLSSLLQAVGRLAEYFIGDMFAARFNDALTVVERLVKVTLYGSQIKLYNIETAVPSVLKPDLIDVHAQSLAALQAYSHWLAQFYSEVHRQNPEQFISLVSTALEAITPLISSKVQEKLLLSACHLLVSLATTVRPVFLISIPAVQKVFNRITDTSAQRLPDKAQVLVCRALSNVLLLPWPNLPESEQQWAVRSTNHTSLISALTRDYRQLKSNAVLPQRKVQLEDTKVIIHQTLSVLEDIVESISGESTKSRQICYQSLQESVQVSLALFPAFIHQSDVTDEMLSFFLTLFQGLRVQMGVPFTEQIIQTFLNMFTREQLAESILHEGSTGCRVVEKFLKILQVVVQEPGQVFKPFLPSVISLCMEQVYPIIAERSSPDVKAELFELLFRVLHHNWRYFFKSSVLASVQRGVAEEQMENEAQFSAIMQAFGQSFLQPDIHLFKQNLFYLETLNTKQKLYHKKIFRTTMLFQFVNVLLQVLVHKSHDLLQEEIGIATYNMASVDFDGFYSAFLPEFLASCDGVDSNQKNVLGRNFKMDRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTVKL
SIO_010081: XPO6
subclass of: SO_0000673
so part of: XPO6
location: join(659035..659086,660400..660512,663723..663920,665977..666136,666540..666617,670150..670603,673530..673656,674449..674558,676795..676903,677629..677721,679634..679703,680767..680926,681659..681751,683507..683651,684684..684830,685466..685655,686804..686959,688265..688379,688848..689019,689444..689605,691354..691452,692493..692723,693526..693627)
location: region:659035-693627:1
so has part: feature:659035-659086:1:exon
so has part: feature:660400-660512:1:exon
so has part: feature:663723-663920:1:exon
so has part: feature:665977-666136:1:exon
so has part: feature:666540-666617:1:exon
so has part: feature:670150-670603:1:exon
so has part: feature:673530-673656:1:exon
so has part: feature:674449-674558:1:exon
so has part: feature:676795-676903:1:exon
so has part: feature:677629-677721:1:exon
so has part: feature:679634-679703:1:exon
so has part: feature:680767-680926:1:exon
so has part: feature:681659-681751:1:exon
so has part: feature:683507-683651:1:exon
so has part: feature:684684-684830:1:exon
so has part: feature:685466-685655:1:exon
so has part: feature:686804-686959:1:exon
so has part: feature:688265-688379:1:exon
so has part: feature:688848-689019:1:exon
so has part: feature:689444-689605:1:exon
so has part: feature:691354-691452:1:exon
so has part: feature:692493-692723:1:exon
so has part: feature:693526-693627:1:exon

XP_010717650.1
type: Protein
SIO_000068: ncbiprotein

position:659035:1
position: 659035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:693627:1
position: 693627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:659035-659086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660400-660512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663723-663920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665977-666136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666540-666617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670150-670603:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673530-673656:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674449-674558:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676795-676903:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:677629-677721:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:679634-679703:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680767-680926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:681659-681751:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:683507-683651:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:684684-684830:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685466-685655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:686804-686959:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:688265-688379:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:688848-689019:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:689444-689605:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:691354-691452:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:692493-692723:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693526-693627:1:exon

XPO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: XPO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-6 isoform X2
translation: MTEFFHNCTTNERKREIEELLNNFAQQIGAWRFCLYFLSSTRNDYVMMYSLTVFENLINKMWLGVPSQDKMEIRSCLPKLLLAQHKTLPYFIRNKLCKVIVDIGRQDWPMFYHDFFTNILQLIQSPVTTPLGLIMLKTTSEELACPREDLSVARKEELRKLLLDQVQTVLGLLTGILESIWDKHSVTAATPPPSPTSGESGDLLSSLLQSPSAAKLLNQPIPILDTDSEYICSLALECLAHLFSWIPLSTSITPSLLTTIFHFARFGCDTRVRKMSSVNGSSQNVGLGAERGRLGVLAMSCINELMSKNCVPMEFEEYLLRMFQQTFYLLQKITKENNAHTVKSRLEELDESYIEKFTDFLRLFVSVHLRRIESYSQFPVVEFLALLFKYTFHQPTHEGYFSCLDIWTLFLDYLTSKIKSRLADKEAVLNRYEDALVLLLTEVLNRIQFRYNQAQLEELDDETLDDDQTEWQRYLRQSLEVVAKVMELLPTHAFSTLFPVLQDNLEVYLGLQQFVVTSGTGHRLNITAENDCRRLHCSLRDLSSLLQAVGRLAEYFIGDMFAARFNDALTVVERLVKVTLYGSQIKLYNIETAVPSVLKPDLIDVHAQSLAALQAYSHWLAQFYSEVHRQNPEQFISLVSTALEAITPLISSKVQEKLLLSACHLLVSLATTVRPVFLISIPAVQKVFNRITDTSAQRLPDKAQVLVCRALSNVLLLPWPNLPESEQQWAVRSTNHTSLISALTRDYRQLKSNAVLPQRKVQLEDTKVIIHQTLSVLEDIVESISGESTKSRQICYQSLQESVQVSLALFPAFIHQSDVTDEMLSFFLTLFQGLRVQMGVPFTEQIIQTFLNMFTREQLAESILHEGSTGCRVVEKFLKILQVVVQEPGQVFKPFLPSVISLCMEQVYPIIAERSSPDVKAELFELLFRVLHHNWRYFFKSSVLASVQRGVAEEQMENEAQFSAIMQAFGQSFLQPDIHLFKQNLFYLETLNTKQKLYHKKIFRTTMLFQFVNVLLQVLVHKSHDLLQEEIGIATYNMASVDFDGFYSAFLPEFLASCDGVDSNQKNVLGRNFKMDRDLPSFTQNVHRLVNDLRYYRLCNDSLPPGTVKL
SIO_010081: XPO6
subclass of: SO_0000673
so part of: XPO6
location: join(659035..659086,660400..660512,663723..663920,665977..666136,666540..666617,670150..670603,673530..673656,674449..674558,676795..676903,677632..677721,679634..679703,680767..680926,681659..681751,683507..683651,684684..684830,685466..685655,686804..686959,688265..688379,688848..689019,689444..689605,691354..691452,692493..692723,693526..693627)
location: region:659035-693627:1
so has part: feature:659035-659086:1:exon
so has part: feature:660400-660512:1:exon
so has part: feature:663723-663920:1:exon
so has part: feature:665977-666136:1:exon
so has part: feature:666540-666617:1:exon
so has part: feature:670150-670603:1:exon
so has part: feature:673530-673656:1:exon
so has part: feature:674449-674558:1:exon
so has part: feature:676795-676903:1:exon
so has part: feature:677632-677721:1:exon
so has part: feature:679634-679703:1:exon
so has part: feature:680767-680926:1:exon
so has part: feature:681659-681751:1:exon
so has part: feature:683507-683651:1:exon
so has part: feature:684684-684830:1:exon
so has part: feature:685466-685655:1:exon
so has part: feature:686804-686959:1:exon
so has part: feature:688265-688379:1:exon
so has part: feature:688848-689019:1:exon
so has part: feature:689444-689605:1:exon
so has part: feature:691354-691452:1:exon
so has part: feature:692493-692723:1:exon
so has part: feature:693526-693627:1:exon

XP_031411672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:659035-659086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:660400-660512:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:663723-663920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:665977-666136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:666540-666617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:670150-670603:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673530-673656:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:674449-674558:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:676795-676903:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:677632-677721:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:679634-679703:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:680767-680926:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:681659-681751:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:683507-683651:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:684684-684830:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:685466-685655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:686804-686959:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:688265-688379:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:688848-689019:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:689444-689605:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:691354-691452:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:692493-692723:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:693526-693627:1:exon

LOC104913472
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 704015..705952
location: region:704015-705952:1
so has part: feature:704015-705952:1:exon
subclass of: SO_0000010

104913472
type: Gene
SIO_000068: ncbigene

position:704015:1
position: 704015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705952:1
position: 705952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704015-705952:1:exon

LOC104913472
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913472
product: glucagon receptor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010719744.2
SIO_010081: LOC104913472
subclass of: SO_0000673
so part of: LOC104913472
location: join(704015..704071,704375..704415,704539..704677,704908..704949,705076..705952)
location: region:704015-705952:1
so has part: feature:704015-704071:1:exon
so has part: feature:704375-704415:1:exon
so has part: feature:704539-704677:1:exon
so has part: feature:704908-704949:1:exon
so has part: feature:705076-705952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:704015-704071:1:exon

position:704071:1
position: 704071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:704375-704415:1:exon

position:704375:1
position: 704375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704415:1
position: 704415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:704539-704677:1:exon

position:704539:1
position: 704539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704677:1
position: 704677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:704908-704949:1:exon

position:704908:1
position: 704908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:704949:1
position: 704949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:705076-705952:1:exon

position:705076:1
position: 705076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913472
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913472
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucagon receptor-like
translation: MGRGKYGGSCGTDGDTGLTLRANQKGYADYKLRLAKATLTLIPLFGIHEVVFIFATDEQTTGILRYIKVFFTLFLNSFQGFLVAVLYCFANKEVKSEMKKKWQLWKLDHPTLCCTQ
SIO_010081: LOC104913472
subclass of: SO_0000673
so part of: LOC104913472
location: join(704015..704071,704375..704415,704539..704677,704908..704949,705076..705147)
location: region:704015-705147:1
so has part: feature:704015-704071:1:exon
so has part: feature:704375-704415:1:exon
so has part: feature:704539-704677:1:exon
so has part: feature:704908-704949:1:exon
so has part: feature:705076-705147:1:exon

XP_010718046.1
type: Protein
SIO_000068: ncbiprotein

position:705147:1
position: 705147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704015-704071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:704375-704415:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:704539-704677:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:704908-704949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705076-705147:1:exon

ANKS3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ANKS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(707027..723633)
location: region:707027-723633:-1
so has part: feature:707027-723633:-1:exon
subclass of: SO_0000010

100543793
type: Gene
SIO_000068: ncbigene

position:707027:-1
position: 707027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723633:-1
position: 723633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707027-723633:-1:exon

ANKS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ANKS3
product: ankyrin repeat and sterile alpha motif domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_010719352.3
SIO_010081: ANKS3
subclass of: SO_0000673
so part of: ANKS3
location: complement(join(707027..708907,709100..709194,709669..709752,710633..710718,711898..712070,712673..712814,713064..713188,713690..713857,714681..714796,715939..716064,717245..717403,717660..717795,718454..718535,718964..719085,719295..719493,720009..720184,720330..720439,723547..723633))
location: region:707027-723633:-1
so has part: feature:723547-723633:-1:exon
so has part: feature:720330-720439:-1:exon
so has part: feature:720009-720184:-1:exon
so has part: feature:719295-719493:-1:exon
so has part: feature:718964-719085:-1:exon
so has part: feature:718454-718535:-1:exon
so has part: feature:717660-717795:-1:exon
so has part: feature:717245-717403:-1:exon
so has part: feature:715939-716064:-1:exon
so has part: feature:714681-714796:-1:exon
so has part: feature:713690-713857:-1:exon
so has part: feature:713064-713188:-1:exon
so has part: feature:712673-712814:-1:exon
so has part: feature:711898-712070:-1:exon
so has part: feature:710633-710718:-1:exon
so has part: feature:709669-709752:-1:exon
so has part: feature:709100-709194:-1:exon
so has part: feature:707027-708907:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:723547-723633:-1:exon

position:723547:-1
position: 723547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720330-720439:-1:exon

position:720330:-1
position: 720330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720439:-1
position: 720439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:720009-720184:-1:exon

position:720009:-1
position: 720009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720184:-1
position: 720184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:719295-719493:-1:exon

position:719295:-1
position: 719295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719493:-1
position: 719493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:718964-719085:-1:exon

position:718964:-1
position: 718964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719085:-1
position: 719085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:718454-718535:-1:exon

position:718454:-1
position: 718454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718535:-1
position: 718535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:717660-717795:-1:exon

position:717660:-1
position: 717660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717795:-1
position: 717795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:717245-717403:-1:exon

position:717245:-1
position: 717245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717403:-1
position: 717403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:715939-716064:-1:exon

position:715939:-1
position: 715939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716064:-1
position: 716064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:714681-714796:-1:exon

position:714681:-1
position: 714681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714796:-1
position: 714796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:713690-713857:-1:exon

position:713690:-1
position: 713690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713857:-1
position: 713857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:713064-713188:-1:exon

position:713064:-1
position: 713064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713188:-1
position: 713188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:712673-712814:-1:exon

position:712673:-1
position: 712673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712814:-1
position: 712814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:711898-712070:-1:exon

position:711898:-1
position: 711898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712070:-1
position: 712070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:710633-710718:-1:exon

position:710633:-1
position: 710633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710718:-1
position: 710718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:709669-709752:-1:exon

position:709669:-1
position: 709669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709752:-1
position: 709752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:709100-709194:-1:exon

position:709100:-1
position: 709100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709194:-1
position: 709194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:707027-708907:-1:exon

position:708907:-1
position: 708907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ANKS3
product: ankyrin repeat and sterile alpha motif domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_010719350.3
SIO_010081: ANKS3
subclass of: SO_0000673
so part of: ANKS3
location: complement(join(707027..708907,709100..709194,709669..709752,710633..710718,711898..712070,712673..712814,713064..713188,713690..713857,714681..714796,715939..716064,717245..717403,717660..717795,718454..718535,718964..719085,719295..719493,720009..720184,720330..720439,723459..723589))
location: region:707027-723589:-1
so has part: feature:723459-723589:-1:exon
so has part: feature:720330-720439:-1:exon
so has part: feature:720009-720184:-1:exon
so has part: feature:719295-719493:-1:exon
so has part: feature:718964-719085:-1:exon
so has part: feature:718454-718535:-1:exon
so has part: feature:717660-717795:-1:exon
so has part: feature:717245-717403:-1:exon
so has part: feature:715939-716064:-1:exon
so has part: feature:714681-714796:-1:exon
so has part: feature:713690-713857:-1:exon
so has part: feature:713064-713188:-1:exon
so has part: feature:712673-712814:-1:exon
so has part: feature:711898-712070:-1:exon
so has part: feature:710633-710718:-1:exon
so has part: feature:709669-709752:-1:exon
so has part: feature:709100-709194:-1:exon
so has part: feature:707027-708907:-1:exon

position:723589:-1
position: 723589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723459-723589:-1:exon

position:723459:-1
position: 723459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720330-720439:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:720009-720184:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:719295-719493:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:718964-719085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:718454-718535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:717660-717795:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:717245-717403:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:715939-716064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:714681-714796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:713690-713857:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:713064-713188:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:712673-712814:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:711898-712070:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:710633-710718:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:709669-709752:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:709100-709194:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:707027-708907:-1:exon

ANKS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ANKS3
product: ankyrin repeat and sterile alpha motif domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_010719349.3
SIO_010081: ANKS3
subclass of: SO_0000673
so part of: ANKS3
location: complement(join(707027..708907,709100..709194,709669..709752,710633..710718,711898..712070,712673..712814,713064..713188,713690..713857,714681..714796,715939..716064,717245..717403,717660..717795,718454..718535,718964..719085,719295..719493,720009..720184,720330..720439,721062..723424))
location: region:707027-723424:-1
so has part: feature:721062-723424:-1:exon
so has part: feature:720330-720439:-1:exon
so has part: feature:720009-720184:-1:exon
so has part: feature:719295-719493:-1:exon
so has part: feature:718964-719085:-1:exon
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so has part: feature:709100-709194:-1:exon
so has part: feature:707027-708907:-1:exon

position:723424:-1
position: 723424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:721062-723424:-1:exon

position:721062:-1
position: 721062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720330-720439:-1:exon

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SIO_000300: 3
SIO_000628: feature:720009-720184:-1:exon

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SIO_000628: feature:719295-719493:-1:exon

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SIO_000300: 8
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SIO_000300: 9
SIO_000628: feature:715939-716064:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:714681-714796:-1:exon

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SIO_000300: 13
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SIO_000300: 14
SIO_000628: feature:711898-712070:-1:exon

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SIO_000300: 15
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SIO_000300: 16
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SIO_000628: feature:709100-709194:-1:exon

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ANKS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ANKS3
product: ankyrin repeat and sterile alpha motif domain containing 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_031555813.1
SIO_010081: ANKS3
subclass of: SO_0000673
so part of: ANKS3
location: complement(join(707027..708907,709100..709194,709669..709752,710633..710718,711898..712070,712673..712814,713064..713188,713690..713857,714681..714796,715939..716064,717245..717403,717660..717795,718454..718535,718964..719155,719295..719387))
location: region:707027-719387:-1
so has part: feature:719295-719387:-1:exon
so has part: feature:718964-719155:-1:exon
so has part: feature:718454-718535:-1:exon
so has part: feature:717660-717795:-1:exon
so has part: feature:717245-717403:-1:exon
so has part: feature:715939-716064:-1:exon
so has part: feature:714681-714796:-1:exon
so has part: feature:713690-713857:-1:exon
so has part: feature:713064-713188:-1:exon
so has part: feature:712673-712814:-1:exon
so has part: feature:711898-712070:-1:exon
so has part: feature:710633-710718:-1:exon
so has part: feature:709669-709752:-1:exon
so has part: feature:709100-709194:-1:exon
so has part: feature:707027-708907:-1:exon

position:719387:-1
position: 719387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719295-719387:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718964-719155:-1:exon

position:719155:-1
position: 719155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:718454-718535:-1:exon