Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 15, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 15, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015025.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015025.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000976.2.\nOn Dec 18, 2014 this sequence version replaced NC_015025.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 17450715
topology: linear
so has quality: SO_0000987
location: 1..17450715
location: region:1-17450715:1
RO_0002162: 9103

NC_015025
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17450715:1
position: 17450715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-17450715:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 15
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

LOC109370036
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15616..27166
location: region:15616-27166:1
so has part: feature:15616-27166:1:exon
subclass of: SO_0000011

109370036
type: Gene
SIO_000068: ncbigene

position:15616:1
position: 15616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27166:1
position: 27166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15616-27166:1:exon

LOC109370036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370036
product: uncharacterized LOC109370036, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XR_004161379.1
SIO_010081: LOC109370036
subclass of: SO_0000673
so part of: LOC109370036
location: join(15616..18293,27071..27166)
location: region:15616-27166:1
so has part: feature:15616-18293:1:exon
so has part: feature:27071-27166:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15616-18293:1:exon

position:18293:1
position: 18293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27071-27166:1:exon

position:27071:1
position: 27071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109370036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370036
product: uncharacterized LOC109370036, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004161378.1
SIO_010081: LOC109370036
subclass of: SO_0000673
so part of: LOC109370036
location: join(18606..25210,27071..27166)
location: region:18606-27166:1
so has part: feature:18606-25210:1:exon
so has part: feature:27071-27166:1:exon

position:18606:1
position: 18606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18606-25210:1:exon

position:25210:1
position: 25210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27071-27166:1:exon

LOC109370036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370036
product: uncharacterized LOC109370036, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XR_002119786.2
SIO_010081: LOC109370036
subclass of: SO_0000673
so part of: LOC109370036
location: join(18608..25199,27071..27166)
location: region:18608-27166:1
so has part: feature:18608-25199:1:exon
so has part: feature:27071-27166:1:exon

position:18608:1
position: 18608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18608-25199:1:exon

position:25199:1
position: 25199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27071-27166:1:exon

LOC100548454
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100548454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 27770..39118
location: region:27770-39118:1
so has part: feature:27770-39118:1:exon
subclass of: SO_0000010

100548454
type: Gene
SIO_000068: ncbigene

position:27770:1
position: 27770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39118:1
position: 39118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27770-39118:1:exon

LOC100548454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100548454
product: ubiquitin-conjugating enzyme E2 D3-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_019620335.2
SIO_010081: LOC100548454
subclass of: SO_0000673
so part of: LOC100548454
location: join(27770..28736,34342..34405,38664..38695,38783..38860,38949..39118)
location: region:27770-39118:1
so has part: feature:27770-28736:1:exon
so has part: feature:34342-34405:1:exon
so has part: feature:38664-38695:1:exon
so has part: feature:38783-38860:1:exon
so has part: feature:38949-39118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:27770-28736:1:exon

position:28736:1
position: 28736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34342-34405:1:exon

position:34342:1
position: 34342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34405:1
position: 34405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38664-38695:1:exon

position:38664:1
position: 38664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38695:1
position: 38695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:38783-38860:1:exon

position:38783:1
position: 38783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38860:1
position: 38860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:38949-39118:1:exon

position:38949:1
position: 38949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100548454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100548454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D2-like isoform X2
translation: MLLGGSHMEELLSSCCLWCSCSTLNSPKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKGTSNAHLILLCSNY
SIO_010081: LOC100548454
subclass of: SO_0000673
so part of: LOC100548454
location: join(28653..28736,34342..34405,38664..38695,38783..38860,38949..39098)
location: region:28653-39098:1
so has part: feature:28653-28736:1:exon
so has part: feature:34342-34405:1:exon
so has part: feature:38664-38695:1:exon
so has part: feature:38783-38860:1:exon
so has part: feature:38949-39098:1:exon

XP_019475880.1
type: Protein
SIO_000068: ncbiprotein

position:28653:1
position: 28653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39098:1
position: 39098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28653-28736:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34342-34405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38664-38695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38783-38860:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38949-39098:1:exon

LOC100548454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100548454
product: ubiquitin-conjugating enzyme E2 D3-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019620334.2
SIO_010081: LOC100548454
subclass of: SO_0000673
so part of: LOC100548454
location: join(28780..29618,34342..34405,38664..38695,38783..38860,38949..39118)
location: region:28780-39118:1
so has part: feature:28780-29618:1:exon
so has part: feature:34342-34405:1:exon
so has part: feature:38664-38695:1:exon
so has part: feature:38783-38860:1:exon
so has part: feature:38949-39118:1:exon

position:28780:1
position: 28780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28780-29618:1:exon

position:29618:1
position: 29618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34342-34405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38664-38695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38783-38860:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38949-39118:1:exon

LOC100548454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100548454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D2-like isoform X1
translation: MPQKGRFCERRRIKILLKSKAFLLLGRSSLRVGDILELQSLVGQKCLWNPRLDAGAWELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKGTSNAHLILLCSNY
SIO_010081: LOC100548454
subclass of: SO_0000673
so part of: LOC100548454
location: join(29448..29618,34342..34405,38664..38695,38783..38860,38949..39098)
location: region:29448-39098:1
so has part: feature:29448-29618:1:exon
so has part: feature:34342-34405:1:exon
so has part: feature:38664-38695:1:exon
so has part: feature:38783-38860:1:exon
so has part: feature:38949-39098:1:exon

XP_019475879.1
type: Protein
SIO_000068: ncbiprotein

position:29448:1
position: 29448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29448-29618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:34342-34405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38664-38695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38783-38860:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38949-39098:1:exon

LOC100548454
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100548454
product: ubiquitin-conjugating enzyme E2 D3-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_010718805.2
SIO_010081: LOC100548454
subclass of: SO_0000673
so part of: LOC100548454
location: join(29615..29692,34342..34405,38664..38695,38783..38860,38949..39118)
location: region:29615-39118:1
so has part: feature:29615-29692:1:exon
so has part: feature:34342-34405:1:exon
so has part: feature:38664-38695:1:exon
so has part: feature:38783-38860:1:exon
so has part: feature:38949-39118:1:exon

position:29615:1
position: 29615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29615-29692:1:exon

position:29692:1
position: 29692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:34342-34405:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38664-38695:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38783-38860:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:38949-39118:1:exon

LOC100548454
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100548454
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-conjugating enzyme E2 D3-like isoform X3
translation: MFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKGTSNAHLILLCSNY
SIO_010081: LOC100548454
subclass of: SO_0000673
so part of: LOC100548454
location: join(34405,38664..38695,38783..38860,38949..39098)
location: region:34405-39098:1
so has part: feature:34405-34405:1:exon
so has part: feature:38664-38695:1:exon
so has part: feature:38783-38860:1:exon
so has part: feature:38949-39098:1:exon

XP_010717107.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34405-34405:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:38664-38695:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:38783-38860:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:38949-39098:1:exon

STING1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: STING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(47147..53500)
location: region:47147-53500:-1
so has part: feature:47147-53500:-1:exon
subclass of: SO_0000010

104913212
type: Gene
SIO_000068: ncbigene

position:47147:-1
position: 47147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:53500:-1
position: 53500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47147-53500:-1:exon

STING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STING1
product: stimulator of interferon response cGAMP interactor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_010718793.3
SIO_010081: STING1
subclass of: SO_0000673
so part of: STING1
location: complement(join(47147..47441,47527..47713,48045..48283,48399..48507,48688..48862,48958..49231,49409..49581,53014..53500))
location: region:47147-53500:-1
so has part: feature:53014-53500:-1:exon
so has part: feature:49409-49581:-1:exon
so has part: feature:48958-49231:-1:exon
so has part: feature:48688-48862:-1:exon
so has part: feature:48399-48507:-1:exon
so has part: feature:48045-48283:-1:exon
so has part: feature:47527-47713:-1:exon
so has part: feature:47147-47441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:53014-53500:-1:exon

position:53014:-1
position: 53014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:49409-49581:-1:exon

position:49409:-1
position: 49409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49581:-1
position: 49581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:48958-49231:-1:exon

position:48958:-1
position: 48958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49231:-1
position: 49231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48688-48862:-1:exon

position:48688:-1
position: 48688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48862:-1
position: 48862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:48399-48507:-1:exon

position:48399:-1
position: 48399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48507:-1
position: 48507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:48045-48283:-1:exon

position:48045:-1
position: 48045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48283:-1
position: 48283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:47527-47713:-1:exon

position:47527:-1
position: 47527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:47713:-1
position: 47713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:47147-47441:-1:exon

position:47441:-1
position: 47441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STING1
product: stimulator of interferon response cGAMP interactor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 94 samples with support for all annotated introns
transcript id: XM_010718794.3
SIO_010081: STING1
subclass of: SO_0000673
so part of: STING1
location: complement(join(47147..47441,47527..47713,48045..48283,48399..48507,48688..48862,48958..49202,49409..49581,53014..53499))
location: region:47147-53499:-1
so has part: feature:53014-53499:-1:exon
so has part: feature:49409-49581:-1:exon
so has part: feature:48958-49202:-1:exon
so has part: feature:48688-48862:-1:exon
so has part: feature:48399-48507:-1:exon
so has part: feature:48045-48283:-1:exon
so has part: feature:47527-47713:-1:exon
so has part: feature:47147-47441:-1:exon

position:53499:-1
position: 53499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:53014-53499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:49409-49581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48958-49202:-1:exon

position:49202:-1
position: 49202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:48688-48862:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48399-48507:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:48045-48283:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47527-47713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47147-47441:-1:exon

STING1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STING1
product: stimulator of interferon response cGAMP interactor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 145 samples with support for all annotated introns
transcript id: XM_019620336.2
SIO_010081: STING1
subclass of: SO_0000673
so part of: STING1
location: complement(join(47147..47441,47527..47713,48045..48283,48399..48507,48688..48862,48958..49231,49409..52245))
location: region:47147-52245:-1
so has part: feature:49409-52245:-1:exon
so has part: feature:48958-49231:-1:exon
so has part: feature:48688-48862:-1:exon
so has part: feature:48399-48507:-1:exon
so has part: feature:48045-48283:-1:exon
so has part: feature:47527-47713:-1:exon
so has part: feature:47147-47441:-1:exon

position:52245:-1
position: 52245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:49409-52245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48958-49231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48688-48862:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48399-48507:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:48045-48283:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47527-47713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:47147-47441:-1:exon

STING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stimulator of interferon genes protein
translation: MPQDLSTRSSPAALLIPEPRAGRARHAACVLLAVCFVVLFLIGEPLMPITYRACTQLAALQLGVLLKGCCCLAEEIFHLRSRHHGSLWQMLCACFPPHWHLALLLVGGSAYLDPQEDNGHSPRLALACLCQLLVLALGLQKLSAVEVSELTESSKKNVAHGLAWSYYVGYLKIVLPRLKECMEEISRVNPMLRAHHDTWKLHILVPLNCDIWDDLEKADSNIQYLADLPETTLTRAGIKRRVYRQSLYMIRDKDNKPRPCVLEFASPLQTLYAMAQDECAAFGREQRLEQARLFYRTLRDILGSSRECAGTYRLIAYEEPAEAESHFLSRLILWHLQQQQSEEYMVQEELPLGTSSMELSLQVSSSDLPQPLRSDRP
SIO_010081: STING1
subclass of: SO_0000673
so part of: STING1
location: complement(join(47263..47441,47527..47713,48045..48283,48399..48507,48688..48862,48958..49202))
location: region:47263-49202:-1
so has part: feature:48958-49202:-1:exon
so has part: feature:48688-48862:-1:exon
so has part: feature:48399-48507:-1:exon
so has part: feature:48045-48283:-1:exon
so has part: feature:47527-47713:-1:exon
so has part: feature:47263-47441:-1:exon

XP_019475881.1
type: Protein
SIO_000068: ncbiprotein

position:47263:-1
position: 47263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48958-49202:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48688-48862:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48399-48507:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48045-48283:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47527-47713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47263-47441:-1:exon

STING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stimulator of interferon genes protein
translation: MPQDLSTRSSPAALLIPEPRAGRARHAACVLLAVCFVVLFLIGEPLMPITYRACTQLAALQLGVLLKGCCCLAEEIFHLRSRHHGSLWQMLCACFPPHWHLALLLVGGSAYLDPQEDNGHSPRLALACLCQLLVLALGLQKLSAVEVSELTESSKKNVAHGLAWSYYVGYLKIVLPRLKECMEEISRVNPMLRAHHDTWKLHILVPLNCDIWDDLEKADSNIQYLADLPETTLTRAGIKRRVYRQSLYMIRDKDNKPRPCVLEFASPLQTLYAMAQDECAAFGREQRLEQARLFYRTLRDILGSSRECAGTYRLIAYEEPAEAESHFLSRLILWHLQQQQSEEYMVQEELPLGTSSMELSLQVSSSDLPQPLRSDRP
SIO_010081: STING1
subclass of: SO_0000673
so part of: STING1
location: complement(join(47263..47441,47527..47713,48045..48283,48399..48507,48688..48862,48958..49202))
location: region:47263-49202:-1
so has part: feature:48958-49202:-1:exon
so has part: feature:48688-48862:-1:exon
so has part: feature:48399-48507:-1:exon
so has part: feature:48045-48283:-1:exon
so has part: feature:47527-47713:-1:exon
so has part: feature:47263-47441:-1:exon

XP_010717095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48958-49202:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48688-48862:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48399-48507:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48045-48283:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47527-47713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47263-47441:-1:exon

STING1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STING1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stimulator of interferon genes protein
translation: MPQDLSTRSSPAALLIPEPRAGRARHAACVLLAVCFVVLFLIGEPLMPITYRACTQLAALQLGVLLKGCCCLAEEIFHLRSRHHGSLWQMLCACFPPHWHLALLLVGGSAYLDPQEDNGHSPRLALACLCQLLVLALGLQKLSAVEVSELTESSKKNVAHGLAWSYYVGYLKIVLPRLKECMEEISRVNPMLRAHHDTWKLHILVPLNCDIWDDLEKADSNIQYLADLPETTLTRAGIKRRVYRQSLYMIRDKDNKPRPCVLEFASPLQTLYAMAQDECAAFGREQRLEQARLFYRTLRDILGSSRECAGTYRLIAYEEPAEAESHFLSRLILWHLQQQQSEEYMVQEELPLGTSSMELSLQVSSSDLPQPLRSDRP
SIO_010081: STING1
subclass of: SO_0000673
so part of: STING1
location: complement(join(47263..47441,47527..47713,48045..48283,48399..48507,48688..48862,48958..49202))
location: region:47263-49202:-1
so has part: feature:48958-49202:-1:exon
so has part: feature:48688-48862:-1:exon
so has part: feature:48399-48507:-1:exon
so has part: feature:48045-48283:-1:exon
so has part: feature:47527-47713:-1:exon
so has part: feature:47263-47441:-1:exon

XP_010717096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:48958-49202:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48688-48862:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:48399-48507:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:48045-48283:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:47527-47713:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:47263-47441:-1:exon

SLC35A4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC35A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(61144..63080)
location: region:61144-63080:-1
so has part: feature:61144-63080:-1:exon
subclass of: SO_0000010

100548304
type: Gene
SIO_000068: ncbigene

position:61144:-1
position: 61144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63080:-1
position: 63080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61144-63080:-1:exon

SLC35A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC35A4
product: solute carrier family 35 member A4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 189 samples with support for all annotated introns
transcript id: XM_010718795.3
SIO_010081: SLC35A4
subclass of: SO_0000673
so part of: SLC35A4
location: complement(join(61144..62708,62963..63080))
location: region:61144-63080:-1
so has part: feature:62963-63080:-1:exon
so has part: feature:61144-62708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:62963-63080:-1:exon

position:62963:-1
position: 62963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:61144-62708:-1:exon

position:62708:-1
position: 62708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC35A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC35A4
product: solute carrier family 35 member A4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003210237.4
SIO_010081: SLC35A4
subclass of: SO_0000673
so part of: SLC35A4
location: complement(61144..62866)
location: region:61144-62866:-1
so has part: feature:61144-62866:-1:exon

position:62866:-1
position: 62866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61144-62866:-1:exon

SLC35A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC35A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable UDP-sugar transporter protein SLC35A4 isoform X2
translation: MWQVDGAIPFSSSAVVVLIELTKLVLSLLFLLTWDRQLLGAAVSWRHVAPFALSALLYAANNNLVVHMQLFMDPSTYQILSNLKIVSTALLYSLFLRQRLRVRQWLALCLLMAAGVSYSCGGLRDPRGSGSPSAMQLHVTLVGLLLISVYCLISGLSAVYTEAILKTQVLPLNLQNLFLYFFGVLVNLVGHFWSSTERGFLEGFSFWVLVIVVSQALNGLIMSVVMKHSSNITRLFVISCSILVNALLSVALFNLQLTLLFFIAVSCIGLAVHLYYGVT
SIO_010081: SLC35A4
subclass of: SO_0000673
so part of: SLC35A4
location: complement(join(61878..62708,62963..62971))
location: region:61878-62971:-1
so has part: feature:62963-62971:-1:exon
so has part: feature:61878-62708:-1:exon

XP_010717097.1
type: Protein
SIO_000068: ncbiprotein

position:61878:-1
position: 61878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62971:-1
position: 62971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62963-62971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:61878-62708:-1:exon

SLC35A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC35A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable UDP-sugar transporter protein SLC35A4 isoform X1
translation: MAVFGKAAGAALSPSQRGLWGLMLLSSVAIYGSHAPLLTLCKVDGAIPFSSSAVVVLIELTKLVLSLLFLLTWDRQLLGAAVSWRHVAPFALSALLYAANNNLVVHMQLFMDPSTYQILSNLKIVSTALLYSLFLRQRLRVRQWLALCLLMAAGVSYSCGGLRDPRGSGSPSAMQLHVTLVGLLLISVYCLISGLSAVYTEAILKTQVLPLNLQNLFLYFFGVLVNLVGHFWSSTERGFLEGFSFWVLVIVVSQALNGLIMSVVMKHSSNITRLFVISCSILVNALLSVALFNLQLTLLFFIAVSCIGLAVHLYYGVT
SIO_010081: SLC35A4
subclass of: SO_0000673
so part of: SLC35A4
location: complement(61878..62834)
location: region:61878-62834:-1
so has part: feature:61878-62834:-1:exon

XP_003210285.1
type: Protein
SIO_000068: ncbiprotein

position:62834:-1
position: 62834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61878-62834:-1:exon

LOC116217201
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62913..>63519)
location: region:62913-63519:-1
so has part: feature:62913-63519:-1:exon
subclass of: SO_0000010

116217201
type: Gene
SIO_000068: ncbigene

position:62913:-1
position: 62913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63519:-1
position: 63519
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62913-63519:-1:exon

LOC116217201
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC116217201
product: SLC35A4 upstream open reading frame protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_031555661.1
SIO_010081: LOC116217201
subclass of: SO_0000673
so part of: LOC116217201
location: complement(join(62913..63319,63403..>63519))
location: region:62913-63519:-1
so has part: feature:63403-63519:-1:exon
so has part: feature:62913-63319:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63403-63519:-1:exon

position:63403:-1
position: 63403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:62913-63319:-1:exon

position:63319:-1
position: 63319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217201
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC116217201
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SLC35A4 upstream open reading frame protein-like
translation: GCAFPQDSLPKLKDLALLKGQLESLQRRVEDEVHAGVGQGGSLLASPFLKGFLAGYLVAKLRFSAVLGFAVGTCTGIYAAQNYAVPDVEKTVQDYLSSLRKGGE
SIO_010081: LOC116217201
subclass of: SO_0000673
so part of: LOC116217201
location: complement(join(63122..63319,63403..>63519))
location: region:63122-63519:-1
so has part: feature:63403-63519:-1:exon
so has part: feature:63122-63319:-1:exon

XP_031411521.1
type: Protein
SIO_000068: ncbiprotein

position:63122:-1
position: 63122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63403-63519:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:63122-63319:-1:exon

LOC100548001
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100548001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 63632..65671
location: region:63632-65671:1
so has part: feature:63632-65671:1:exon
subclass of: SO_0000010

100548001
type: Gene
SIO_000068: ncbigene

position:63632:1
position: 63632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:65671:1
position: 65671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63632-65671:1:exon

LOC100548001
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100548001
product: monocyte differentiation antigen CD14-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010718807.2
SIO_010081: LOC100548001
subclass of: SO_0000673
so part of: LOC100548001
location: join(63632..65187,65454..65671)
location: region:63632-65671:1
so has part: feature:63632-65187:1:exon
so has part: feature:65454-65671:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:63632-65187:1:exon

position:65187:1
position: 65187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:65454-65671:1:exon

position:65454:1
position: 65454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100548001
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100548001
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: monocyte differentiation antigen CD14-like
translation: MRGAALLLLVLGLQQAEGRCVFNRTQEYCLCYRLTEQSAGSVIQCLAASAVEFQGGDLEKYADFPIKDLDDSTIDMLGSLEIRKIIFSDLLVPEVLLARVLRFFSYTQVQEMVFESCSFVGRSSWADMAGRALPVVSLRFHNVTAATLEGREQDLSPLSRWLGALQELSVTASHLAVLPCTVGRALRALRSLDLAHNSLGEDGLASAFCQGAFPQLRVLSLRHNNLTSYHAVCGGVRLLGELRHLDLSHNALTAGTPSPSCAAHTRVPNCAQSAARFARRGSPRRRHVKQKCSPAASHGTAAPSHSGSGRDGEPRSTGGAVCLLRRAGGRCR
SIO_010081: LOC100548001
subclass of: SO_0000673
so part of: LOC100548001
location: join(64407..65187,65454..65671)
location: region:64407-65671:1
so has part: feature:64407-65187:1:exon
so has part: feature:65454-65671:1:exon

XP_010717109.1
type: Protein
SIO_000068: ncbiprotein

position:64407:1
position: 64407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:64407-65187:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:65454-65671:1:exon

NDUFA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NDUFA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 65958..67355
location: region:65958-67355:1
so has part: feature:65958-67355:1:exon
subclass of: SO_0000010

104913213
type: Gene
SIO_000068: ncbigene

position:65958:1
position: 65958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67355:1
position: 67355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65958-67355:1:exon

NDUFA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NDUFA2
product: NADH:ubiquinone oxidoreductase subunit A2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010718797.2
SIO_010081: NDUFA2
subclass of: SO_0000673
so part of: NDUFA2
location: join(65958..66101,66178..66284,67167..67355)
location: region:65958-67355:1
so has part: feature:65958-66101:1:exon
so has part: feature:66178-66284:1:exon
so has part: feature:67167-67355:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:65958-66101:1:exon

position:66101:1
position: 66101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:66178-66284:1:exon

position:66178:1
position: 66178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:66284:1
position: 66284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:67167-67355:1:exon

position:67167:1
position: 67167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDUFA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NDUFA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2
translation: MAAAVVRGIGGGLGHGLRELRVHLCQRSAGSRGAREFIEQHYVTLKQANPDFPILIRECSGVQPRLWARYEFGKEKSVSLHNLSVDEVAKALENIVKGKV
SIO_010081: NDUFA2
subclass of: SO_0000673
so part of: NDUFA2
location: join(65998..66101,66178..66284,67167..67258)
location: region:65998-67258:1
so has part: feature:65998-66101:1:exon
so has part: feature:66178-66284:1:exon
so has part: feature:67167-67258:1:exon

XP_010717099.1
type: Protein
SIO_000068: ncbiprotein

position:65998:1
position: 65998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67258:1
position: 67258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65998-66101:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66178-66284:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:67167-67258:1:exon

TMCO6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TMCO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(67270..73158)
location: region:67270-73158:-1
so has part: feature:67270-73158:-1:exon
subclass of: SO_0000010

100548154
type: Gene
SIO_000068: ncbigene

position:67270:-1
position: 67270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73158:-1
position: 73158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:67270-73158:-1:exon

TMCO6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TMCO6
product: transmembrane and coiled-coil domains 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_010718796.3
SIO_010081: TMCO6
subclass of: SO_0000673
so part of: TMCO6
location: complement(join(67270..67831,68315..68482,69016..69110,69598..69772,69861..69972,70461..70577,71106..71191,71795..71899,72772..72955,73037..73158))
location: region:67270-73158:-1
so has part: feature:73037-73158:-1:exon
so has part: feature:72772-72955:-1:exon
so has part: feature:71795-71899:-1:exon
so has part: feature:71106-71191:-1:exon
so has part: feature:70461-70577:-1:exon
so has part: feature:69861-69972:-1:exon
so has part: feature:69598-69772:-1:exon
so has part: feature:69016-69110:-1:exon
so has part: feature:68315-68482:-1:exon
so has part: feature:67270-67831:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:73037-73158:-1:exon

position:73037:-1
position: 73037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:72772-72955:-1:exon

position:72772:-1
position: 72772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72955:-1
position: 72955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:71795-71899:-1:exon

position:71795:-1
position: 71795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71899:-1
position: 71899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:71106-71191:-1:exon

position:71106:-1
position: 71106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71191:-1
position: 71191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:70461-70577:-1:exon

position:70461:-1
position: 70461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:70577:-1
position: 70577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:69861-69972:-1:exon

position:69861:-1
position: 69861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69972:-1
position: 69972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:69598-69772:-1:exon

position:69598:-1
position: 69598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69772:-1
position: 69772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:69016-69110:-1:exon

position:69016:-1
position: 69016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69110:-1
position: 69110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:68315-68482:-1:exon

position:68315:-1
position: 68315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68482:-1
position: 68482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:67270-67831:-1:exon

position:67831:-1
position: 67831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMCO6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TMCO6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domain-containing protein 6
translation: MCGQVSELLRGVPRGSEDRRGWLRRLRRALQSKETQQEFVRLDGAVRTLVGLFTCSLPDVQLEAARCLHELSHSSDAAVAEACVPVTSYLLTYLSGHSIELMELCLYTLGNLVVESEVVRKKLLPQGIIPVLASCIQSPHEAVLEGLGYVLSQLLQANEAPTEIIPLVLDSVLPQHMLRLVCSGLKFGTGAAVEFAWCLHYIVCSHTANVELMSLGAVPALTSLLCDIASEISQSDSEGLELLICPVLRCLGNLLAEETGHEVQSQDERLLVALFIIMQCYLQQHPFIIPESLWLLNNLTADEPFFCSALLSMDLLPALLQLLPHSQTVSMLVLTVLCNIAEKGPAYCQQLHQQAALPLLLQVLMVPDPEVVGQCLELLHLLFLHWPQVAADFVRQRGHQTLEQHQSTPELQERVRVLLDMALQPPGASAFSSSSTASSTFSQMT
SIO_010081: TMCO6
subclass of: SO_0000673
so part of: TMCO6
location: complement(join(67658..67831,68315..68482,69016..69110,69598..69772,69861..69972,70461..70577,71106..71191,71795..71899,72772..72955,73037..73158))
location: region:67658-73158:-1
so has part: feature:73037-73158:-1:exon
so has part: feature:72772-72955:-1:exon
so has part: feature:71795-71899:-1:exon
so has part: feature:71106-71191:-1:exon
so has part: feature:70461-70577:-1:exon
so has part: feature:69861-69972:-1:exon
so has part: feature:69598-69772:-1:exon
so has part: feature:69016-69110:-1:exon
so has part: feature:68315-68482:-1:exon
so has part: feature:67658-67831:-1:exon

XP_010717098.1
type: Protein
SIO_000068: ncbiprotein

position:67658:-1
position: 67658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73037-73158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:72772-72955:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:71795-71899:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:71106-71191:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:70461-70577:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:69861-69972:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69598-69772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69016-69110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:68315-68482:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:67658-67831:-1:exon

IK
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: IK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(74394..82852)
location: region:74394-82852:-1
so has part: feature:74394-82852:-1:exon
subclass of: SO_0000010

100547848
type: Gene
SIO_000068: ncbigene

position:74394:-1
position: 74394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82852:-1
position: 82852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74394-82852:-1:exon

IK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: IK
product: IK cytokine
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010718808.2
SIO_010081: IK
subclass of: SO_0000673
so part of: IK
location: complement(join(74394..74691,75046..75080,75690..75798,76095..76183,76619..76676,77086..77166,77474..77552,78117..78135,78433..78628,79045..79084,79509..79617,79725..79888,80105..80151,80255..80325,80575..80689,80774..80941,81459..81518,81955..82047,82217..82407,82847..82852))
location: region:74394-82852:-1
so has part: feature:82847-82852:-1:exon
so has part: feature:82217-82407:-1:exon
so has part: feature:81955-82047:-1:exon
so has part: feature:81459-81518:-1:exon
so has part: feature:80774-80941:-1:exon
so has part: feature:80575-80689:-1:exon
so has part: feature:80255-80325:-1:exon
so has part: feature:80105-80151:-1:exon
so has part: feature:79725-79888:-1:exon
so has part: feature:79509-79617:-1:exon
so has part: feature:79045-79084:-1:exon
so has part: feature:78433-78628:-1:exon
so has part: feature:78117-78135:-1:exon
so has part: feature:77474-77552:-1:exon
so has part: feature:77086-77166:-1:exon
so has part: feature:76619-76676:-1:exon
so has part: feature:76095-76183:-1:exon
so has part: feature:75690-75798:-1:exon
so has part: feature:75046-75080:-1:exon
so has part: feature:74394-74691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:82847-82852:-1:exon

position:82847:-1
position: 82847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:82217-82407:-1:exon

position:82217:-1
position: 82217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82407:-1
position: 82407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:81955-82047:-1:exon

position:81955:-1
position: 81955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82047:-1
position: 82047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:81459-81518:-1:exon

position:81459:-1
position: 81459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:81518:-1
position: 81518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:80774-80941:-1:exon

position:80774:-1
position: 80774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80941:-1
position: 80941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:80575-80689:-1:exon

position:80575:-1
position: 80575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80689:-1
position: 80689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:80255-80325:-1:exon

position:80255:-1
position: 80255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80325:-1
position: 80325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:80105-80151:-1:exon

position:80105:-1
position: 80105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:80151:-1
position: 80151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:79725-79888:-1:exon

position:79725:-1
position: 79725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79888:-1
position: 79888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:79509-79617:-1:exon

position:79509:-1
position: 79509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79617:-1
position: 79617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:79045-79084:-1:exon

position:79045:-1
position: 79045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:79084:-1
position: 79084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:78433-78628:-1:exon

position:78433:-1
position: 78433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78628:-1
position: 78628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:78117-78135:-1:exon

position:78117:-1
position: 78117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78135:-1
position: 78135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:77474-77552:-1:exon

position:77474:-1
position: 77474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77552:-1
position: 77552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:77086-77166:-1:exon

position:77086:-1
position: 77086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77166:-1
position: 77166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:76619-76676:-1:exon

position:76619:-1
position: 76619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76676:-1
position: 76676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:76095-76183:-1:exon

position:76095:-1
position: 76095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:76183:-1
position: 76183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:75690-75798:-1:exon

position:75690:-1
position: 75690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75798:-1
position: 75798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:75046-75080:-1:exon

position:75046:-1
position: 75046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75080:-1
position: 75080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:74394-74691:-1:exon

position:74691:-1
position: 74691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: IK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Red
translation: MTKGGIGPVGLGGAAAGCDSPVTAGPEGLAAEAGSESCSLPSPGEPFSNPLAPDGHDVDDAHSFHQSKLTNEDFRKLLMTPRATPTSAPPSKSRHHEMPREYNEDEDPAARRRKKKSYYAKLRQQEIERERELAEKYRDRAKERRDGVNKDYEETELISTTANYRAVGPTAEADKSAAEKRRQLIQESKFLGGDMEHTHLVKGLDFALLQKVRAEIASKEKEEEEMMEKPQKETKKDEDPENKIEFKTRLGRNIYRILFKNKAYERNELFLPGRMAYVVDLDDEYADTDIPTTLIRSKADCPTMEAQTTLTTNDIVISKLTQILSYLRQGTRNKKLKKKDKGKLDEKKPPEADMNIFEDIGDYVPSTAKMPRDKERERYRERDRDRERERDRERERDRERDREEEKKRHSYFEKPKADDEPADIDKGPGSAKELIKSINEKFAGAAGWEGTETLKKPEDKKQLGDFFGMSNSYAECYPATMDDMAVDSDEEVDYSKMDQGNKKGPLGRWDFDTQEEYSEYMNNKEALPKAAFQYGIKMSEGRKTRRFKETNDKAELDRQWKKISAIIEKRKKLEADGVEVKRPKY
SIO_010081: IK
subclass of: SO_0000673
so part of: IK
location: complement(join(74664..74691,75046..75080,75690..75798,76095..76183,76619..76676,77086..77166,77474..77552,78117..78135,78433..78628,79045..79084,79509..79617,79725..79888,80105..80151,80255..80325,80575..80689,80774..80941,81459..81518,81955..82047,82217..82407,82847..82852))
location: region:74664-82852:-1
so has part: feature:82847-82852:-1:exon
so has part: feature:82217-82407:-1:exon
so has part: feature:81955-82047:-1:exon
so has part: feature:81459-81518:-1:exon
so has part: feature:80774-80941:-1:exon
so has part: feature:80575-80689:-1:exon
so has part: feature:80255-80325:-1:exon
so has part: feature:80105-80151:-1:exon
so has part: feature:79725-79888:-1:exon
so has part: feature:79509-79617:-1:exon
so has part: feature:79045-79084:-1:exon
so has part: feature:78433-78628:-1:exon
so has part: feature:78117-78135:-1:exon
so has part: feature:77474-77552:-1:exon
so has part: feature:77086-77166:-1:exon
so has part: feature:76619-76676:-1:exon
so has part: feature:76095-76183:-1:exon
so has part: feature:75690-75798:-1:exon
so has part: feature:75046-75080:-1:exon
so has part: feature:74664-74691:-1:exon

XP_010717110.1
type: Protein
SIO_000068: ncbiprotein

position:74664:-1
position: 74664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:82847-82852:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:82217-82407:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:81955-82047:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:81459-81518:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:80774-80941:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:80575-80689:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:80255-80325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:80105-80151:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:79725-79888:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:79509-79617:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:79045-79084:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:78433-78628:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:78117-78135:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:77474-77552:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:77086-77166:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:76619-76676:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:76095-76183:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:75690-75798:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:75046-75080:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:74664-74691:-1:exon

DND1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DND1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 83275..85114
location: region:83275-85114:1
so has part: feature:83275-85114:1:exon
subclass of: SO_0000010

100547539
type: Gene
SIO_000068: ncbigene

position:83275:1
position: 83275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:85114:1
position: 85114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83275-85114:1:exon

DND1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DND1
product: DND microRNA-mediated repression inhibitor 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019620337.2
SIO_010081: DND1
subclass of: SO_0000673
so part of: DND1
location: join(83275..83529,83604..84065,84147..84362,84441..84532,84638..85114)
location: region:83275-85114:1
so has part: feature:83275-83529:1:exon
so has part: feature:83604-84065:1:exon
so has part: feature:84147-84362:1:exon
so has part: feature:84441-84532:1:exon
so has part: feature:84638-85114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:83275-83529:1:exon

position:83529:1
position: 83529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:83604-84065:1:exon

position:83604:1
position: 83604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84065:1
position: 84065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:84147-84362:1:exon

position:84147:1
position: 84147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84362:1
position: 84362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:84441-84532:1:exon

position:84441:1
position: 84441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84532:1
position: 84532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:84638-85114:1:exon

position:84638:1
position: 84638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DND1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: dead end protein homolog 1
translation: MPAVGQLDALPRAAPTSSLPPQQWTSSINRANKVALLTWVRETGIDLVQVNGQRRYGGPPPGWVGSPPPPGSEVYIAKLPRDLYEDTLIPLFQSVGQLYEFRLMLTFSGLNRGFAYAKYSDQRSAGKAIAALNNWEVQEGRAILVCRSFEKCELSVNGLPATLRRGELGAMLLEVTEGLLGLTLHNSPGRKQGKVAVLTYGSHRAAAMAKKALVEGNVGLFKKAKVEWLKPELKEQLRARGKKPPPXNVQRLGSPERVLPSSELRGALGRLQALCRRLHLGSPRFLTSTFLWVREDTSGTAGHEKIKEAVAQLALMMLGY
SIO_010081: DND1
subclass of: SO_0000673
so part of: DND1
location: join(83345..83529,83604..84065,84147..84362,84441..84532,84638..84645)
location: region:83345-84645:1
so has part: feature:83345-83529:1:exon
so has part: feature:83604-84065:1:exon
so has part: feature:84147-84362:1:exon
so has part: feature:84441-84532:1:exon
so has part: feature:84638-84645:1:exon

XP_019475882.1
type: Protein
SIO_000068: ncbiprotein

position:83345:1
position: 83345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:84645:1
position: 84645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:83345-83529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:83604-84065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:84147-84362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:84441-84532:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:84638-84645:1:exon

WDR55
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: WDR55
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(86791..>88516)
location: region:86791-88516:-1
so has part: feature:86791-88516:-1:exon
subclass of: SO_0000010

100547694
type: Gene
SIO_000068: ncbigene

position:86791:-1
position: 86791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88516:-1
position: 88516
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86791-88516:-1:exon

WDR55
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: WDR55
product: WD repeat domain 55
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010718810.3
SIO_010081: WDR55
subclass of: SO_0000673
so part of: WDR55
location: complement(join(86791..87377,87778..87947,88058..88157,88240..88419,88491..>88516))
location: region:86791-88516:-1
so has part: feature:88491-88516:-1:exon
so has part: feature:88240-88419:-1:exon
so has part: feature:88058-88157:-1:exon
so has part: feature:87778-87947:-1:exon
so has part: feature:86791-87377:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88491-88516:-1:exon

position:88491:-1
position: 88491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88240-88419:-1:exon

position:88240:-1
position: 88240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88419:-1
position: 88419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88058-88157:-1:exon

position:88058:-1
position: 88058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88157:-1
position: 88157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:87778-87947:-1:exon

position:87778:-1
position: 87778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87947:-1
position: 87947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:86791-87377:-1:exon

position:87377:-1
position: 87377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WDR55
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: WDR55
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 55
translation: ETRIAKAHGAALNCVLPVDQHLVATGDDNGELKVWDLRKGSAVLEARQHEEYISAMAVDGAGKILLTASGDGTMGVFNIKRRRFELLSEPQSGDLTSVVLLKRGKKVVCGSSEGTIYLFNWNGFGATSDRFSLRAESVDCMVPVTESIVCTGSLDGVIRAVNILPNRVLGCVGQHLGEPIEQLAVAPGGQLLASCAHDQKVKFWDISSLGSIVVDEYRKKKKRGGPLKALSSKAAGSGEDFFADLREEQEATAEATTGSDSDSD
SIO_010081: WDR55
subclass of: SO_0000673
so part of: WDR55
location: complement(join(87059..87377,87778..87947,88058..88157,88240..88419,88491..>88516))
location: region:87059-88516:-1
so has part: feature:88491-88516:-1:exon
so has part: feature:88240-88419:-1:exon
so has part: feature:88058-88157:-1:exon
so has part: feature:87778-87947:-1:exon
so has part: feature:87059-87377:-1:exon

XP_010717112.1
type: Protein
SIO_000068: ncbiprotein

position:87059:-1
position: 87059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88491-88516:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88240-88419:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88058-88157:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:87778-87947:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:87059-87377:-1:exon

HARS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 88623..99595
location: region:88623-99595:1
so has part: feature:88623-99595:1:exon
subclass of: SO_0000010

100547384
type: Gene
SIO_000068: ncbigene

position:88623:1
position: 88623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99595:1
position: 99595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88623-99595:1:exon

HARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HARS1
product: histidyl-tRNA synthetase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010718798.2
SIO_010081: HARS1
subclass of: SO_0000673
so part of: HARS1
location: join(88623..88713,89630..89749,89949..90044,90593..90718,92471..92578,95021..95119,95967..96060,96265..96392,96493..96735,97723..97839,98579..98725,99270..99595)
location: region:88623-99595:1
so has part: feature:88623-88713:1:exon
so has part: feature:89630-89749:1:exon
so has part: feature:89949-90044:1:exon
so has part: feature:90593-90718:1:exon
so has part: feature:92471-92578:1:exon
so has part: feature:95021-95119:1:exon
so has part: feature:95967-96060:1:exon
so has part: feature:96265-96392:1:exon
so has part: feature:96493-96735:1:exon
so has part: feature:97723-97839:1:exon
so has part: feature:98579-98725:1:exon
so has part: feature:99270-99595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88623-88713:1:exon

position:88713:1
position: 88713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:89630-89749:1:exon

position:89630:1
position: 89630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89749:1
position: 89749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:89949-90044:1:exon

position:89949:1
position: 89949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90044:1
position: 90044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:90593-90718:1:exon

position:90593:1
position: 90593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90718:1
position: 90718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92471-92578:1:exon

position:92471:1
position: 92471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92578:1
position: 92578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:95021-95119:1:exon

position:95021:1
position: 95021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95119:1
position: 95119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:95967-96060:1:exon

position:95967:1
position: 95967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96060:1
position: 96060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:96265-96392:1:exon

position:96265:1
position: 96265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96392:1
position: 96392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:96493-96735:1:exon

position:96493:1
position: 96493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:96735:1
position: 96735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:97723-97839:1:exon

position:97723:1
position: 97723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:97839:1
position: 97839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:98579-98725:1:exon

position:98579:1
position: 98579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:98725:1
position: 98725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:99270-99595:1:exon

position:99270:1
position: 99270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HARS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HARS1
product: histidyl-tRNA synthetase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
transcript id: XM_031555662.1
SIO_010081: HARS1
subclass of: SO_0000673
so part of: HARS1
location: join(88623..88713,89630..89749,92471..92578,95021..95119,95967..96060,96265..96392,96493..96735,97723..97839,98579..98725,99270..99595)
location: region:88623-99595:1
so has part: feature:88623-88713:1:exon
so has part: feature:89630-89749:1:exon
so has part: feature:92471-92578:1:exon
so has part: feature:95021-95119:1:exon
so has part: feature:95967-96060:1:exon
so has part: feature:96265-96392:1:exon
so has part: feature:96493-96735:1:exon
so has part: feature:97723-97839:1:exon
so has part: feature:98579-98725:1:exon
so has part: feature:99270-99595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:88623-88713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89630-89749:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92471-92578:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95021-95119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95967-96060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96265-96392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96493-96735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97723-97839:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98579-98725:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99270-99595:1:exon

HARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine--tRNA ligase, cytoplasmic isoform X1
translation: MKARLGGEEGKHKFVLKTPKGTRDYGPKQMAIRERVFIAIITCFKRHGAEVIDTPVFELKETLTGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVHEILSDLQLGDFLIKVNDRRILDGMFAVCGVPDSKFRTICSSVDKLDKMPWEEVRSEMVGEKGLSPEAADRIGEYVQLHGGMDLIEQLLQDPKLSQNKLAKEGLGDMKLLFEYLTLFGIAGKVSFDLSLARGLDYYTGVIYEAVLLQQENDHGEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEASEEKIRTTETQVLVASAQKKLLEERLKLISELWDAGIKAEVLYKKNPKLLNQLQYCEDTGIPLVAIVGEQELKDGVVKLRVVATREEVNIRRESLVEEIRRRTSQL
SIO_010081: HARS1
subclass of: SO_0000673
so part of: HARS1
location: join(88654..88713,89630..89749,89949..90044,90593..90718,92471..92578,95021..95119,95967..96060,96265..96392,96493..96735,97723..97839,98579..98725,99270..99329)
location: region:88654-99329:1
so has part: feature:88654-88713:1:exon
so has part: feature:89630-89749:1:exon
so has part: feature:89949-90044:1:exon
so has part: feature:90593-90718:1:exon
so has part: feature:92471-92578:1:exon
so has part: feature:95021-95119:1:exon
so has part: feature:95967-96060:1:exon
so has part: feature:96265-96392:1:exon
so has part: feature:96493-96735:1:exon
so has part: feature:97723-97839:1:exon
so has part: feature:98579-98725:1:exon
so has part: feature:99270-99329:1:exon

XP_010717100.1
type: Protein
SIO_000068: ncbiprotein

position:88654:1
position: 88654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:99329:1
position: 99329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88654-88713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89630-89749:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:89949-90044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:90593-90718:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:92471-92578:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:95021-95119:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:95967-96060:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:96265-96392:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:96493-96735:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97723-97839:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:98579-98725:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:99270-99329:1:exon

HARS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HARS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine--tRNA ligase, cytoplasmic isoform X2
translation: MKARLGGEEGKHKFVLKTPKGTRDYGPKQMAIRERVFIAIITCFKRHGAEVIDTPVFELKDFDIAGQFDPMIPDAECLKIVHEILSDLQLGDFLIKVNDRRILDGMFAVCGVPDSKFRTICSSVDKLDKMPWEEVRSEMVGEKGLSPEAADRIGEYVQLHGGMDLIEQLLQDPKLSQNKLAKEGLGDMKLLFEYLTLFGIAGKVSFDLSLARGLDYYTGVIYEAVLLQQENDHGEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSILEQRLEASEEKIRTTETQVLVASAQKKLLEERLKLISELWDAGIKAEVLYKKNPKLLNQLQYCEDTGIPLVAIVGEQELKDGVVKLRVVATREEVNIRRESLVEEIRRRTSQL
SIO_010081: HARS1
subclass of: SO_0000673
so part of: HARS1
location: join(88654..88713,89630..89749,92471..92578,95021..95119,95967..96060,96265..96392,96493..96735,97723..97839,98579..98725,99270..99329)
location: region:88654-99329:1
so has part: feature:88654-88713:1:exon
so has part: feature:89630-89749:1:exon
so has part: feature:92471-92578:1:exon
so has part: feature:95021-95119:1:exon
so has part: feature:95967-96060:1:exon
so has part: feature:96265-96392:1:exon
so has part: feature:96493-96735:1:exon
so has part: feature:97723-97839:1:exon
so has part: feature:98579-98725:1:exon
so has part: feature:99270-99329:1:exon

XP_031411522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88654-88713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:89630-89749:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:92471-92578:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:95021-95119:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:95967-96060:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:96265-96392:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:96493-96735:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97723-97839:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98579-98725:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:99270-99329:1:exon

LOC100547230
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100547230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 99708..104304
location: region:99708-104304:1
so has part: feature:99708-104304:1:exon
subclass of: SO_0000010

100547230
type: Gene
SIO_000068: ncbigene

position:99708:1
position: 99708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104304:1
position: 104304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99708-104304:1:exon

LOC100547230
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100547230
product: histidine--tRNA ligase, cytoplasmic-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 145 samples with support for all annotated introns
transcript id: XM_010718811.3
SIO_010081: LOC100547230
subclass of: SO_0000673
so part of: LOC100547230
location: join(99708..99726,100111..100206,100930..101055,101173..101280,101477..101575,101897..101990,102195..102322,102423..102665,102975..103091,103347..103493,103635..104304)
location: region:99708-104304:1
so has part: feature:99708-99726:1:exon
so has part: feature:100111-100206:1:exon
so has part: feature:100930-101055:1:exon
so has part: feature:101173-101280:1:exon
so has part: feature:101477-101575:1:exon
so has part: feature:101897-101990:1:exon
so has part: feature:102195-102322:1:exon
so has part: feature:102423-102665:1:exon
so has part: feature:102975-103091:1:exon
so has part: feature:103347-103493:1:exon
so has part: feature:103635-104304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:99708-99726:1:exon

position:99726:1
position: 99726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100111-100206:1:exon

position:100111:1
position: 100111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100206:1
position: 100206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:100930-101055:1:exon

position:100930:1
position: 100930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101055:1
position: 101055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:101173-101280:1:exon

position:101173:1
position: 101173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101280:1
position: 101280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:101477-101575:1:exon

position:101477:1
position: 101477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101575:1
position: 101575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:101897-101990:1:exon

position:101897:1
position: 101897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101990:1
position: 101990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:102195-102322:1:exon

position:102195:1
position: 102195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102322:1
position: 102322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:102423-102665:1:exon

position:102423:1
position: 102423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102665:1
position: 102665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:102975-103091:1:exon

position:102975:1
position: 102975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103091:1
position: 103091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:103347-103493:1:exon

position:103347:1
position: 103347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103493:1
position: 103493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:103635-104304:1:exon

position:103635:1
position: 103635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100547230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100547230
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histidine--tRNA ligase, cytoplasmic-like
translation: MLMEKYGDDSRLIYELQDQGGELLALRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPATTRGRYREFYQCDFDIAGQFDPMIPDAECLKILHEILSELQIGDFLIKVNDRRILNGMFAICGIPESKLLTLCSTLDKLDKMPWEEVRSEMVGEKGLSPEAADRIGEYVQLHGGMDLIEQLLQDPKLSQNKLAKEGLGDMKLLFEYLTLFGIAGKVSFDLSLARGLDYYTGVIYEAVLLQQENDHGEESVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSILEHRMKASGEKVRTTETQVMVATPQKHLLSARLKLISELWDAGIKAEMMYRKDPKLLKQLQYCEDTGIPLVAIIGEQELRDGVVKLRDVATREEVDIPREELAAEIRRRLVR
SIO_010081: LOC100547230
subclass of: SO_0000673
so part of: LOC100547230
location: join(100114..100206,100930..101055,101173..101280,101477..101575,101897..101990,102195..102322,102423..102665,102975..103091,103347..103493,103635..103691)
location: region:100114-103691:1
so has part: feature:100114-100206:1:exon
so has part: feature:100930-101055:1:exon
so has part: feature:101173-101280:1:exon
so has part: feature:101477-101575:1:exon
so has part: feature:101897-101990:1:exon
so has part: feature:102195-102322:1:exon
so has part: feature:102423-102665:1:exon
so has part: feature:102975-103091:1:exon
so has part: feature:103347-103493:1:exon
so has part: feature:103635-103691:1:exon

XP_010717113.2
type: Protein
SIO_000068: ncbiprotein

position:100114:1
position: 100114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103691:1
position: 103691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100114-100206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:100930-101055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101173-101280:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:101477-101575:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:101897-101990:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:102195-102322:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:102423-102665:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:102975-103091:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103347-103493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:103635-103691:1:exon

ZMAT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ZMAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(111579..118954)
location: region:111579-118954:-1
so has part: feature:111579-118954:-1:exon
subclass of: SO_0000010

100547076
type: Gene
SIO_000068: ncbigene

position:111579:-1
position: 111579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118954:-1
position: 118954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111579-118954:-1:exon

ZMAT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZMAT2
product: zinc finger matrin-type 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019620338.2
SIO_010081: ZMAT2
subclass of: SO_0000673
so part of: ZMAT2
location: complement(join(111579..112401,113909..114054,116334..116407,117725..117848,118414..118507,118913..118954))
location: region:111579-118954:-1
so has part: feature:118913-118954:-1:exon
so has part: feature:118414-118507:-1:exon
so has part: feature:117725-117848:-1:exon
so has part: feature:116334-116407:-1:exon
so has part: feature:113909-114054:-1:exon
so has part: feature:111579-112401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118913-118954:-1:exon

position:118913:-1
position: 118913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:118414-118507:-1:exon

position:118414:-1
position: 118414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:118507:-1
position: 118507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:117725-117848:-1:exon

position:117725:-1
position: 117725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117848:-1
position: 117848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:116334-116407:-1:exon

position:116334:-1
position: 116334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116407:-1
position: 116407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:113909-114054:-1:exon

position:113909:-1
position: 113909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114054:-1
position: 114054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:111579-112401:-1:exon

position:112401:-1
position: 112401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZMAT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZMAT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 2
translation: MTGKCIADIFESRETKNLDFRRKWDKDEYEKLAEKRLTEEREKKDGKPAQPVKRELLRHRDYKVDLESKLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQREKKRRAEEDLTFEEDDEMAAVMGFSGFGSTKKNH
SIO_010081: ZMAT2
subclass of: SO_0000673
so part of: ZMAT2
location: complement(join(112258..112401,113909..114054,116334..116407,117725..117848,118414..118507,118913..118954))
location: region:112258-118954:-1
so has part: feature:118913-118954:-1:exon
so has part: feature:118414-118507:-1:exon
so has part: feature:117725-117848:-1:exon
so has part: feature:116334-116407:-1:exon
so has part: feature:113909-114054:-1:exon
so has part: feature:112258-112401:-1:exon

XP_019475883.2
type: Protein
SIO_000068: ncbiprotein

position:112258:-1
position: 112258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118913-118954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:118414-118507:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:117725-117848:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:116334-116407:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113909-114054:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112258-112401:-1:exon

LOC100546611
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(131285..137410)
location: region:131285-137410:-1
so has part: feature:131285-137410:-1:exon
subclass of: SO_0000010

100546611
type: Gene
SIO_000068: ncbigene

position:131285:-1
position: 131285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:137410:-1
position: 137410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131285-137410:-1:exon

LOC100546611
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546611
product: protocadherin-10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_003210228.3
SIO_010081: LOC100546611
subclass of: SO_0000673
so part of: LOC100546611
location: complement(join(131285..132590,132804..132892,132989..133047,134002..137410))
location: region:131285-137410:-1
so has part: feature:134002-137410:-1:exon
so has part: feature:132989-133047:-1:exon
so has part: feature:132804-132892:-1:exon
so has part: feature:131285-132590:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:134002-137410:-1:exon

position:134002:-1
position: 134002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:132989-133047:-1:exon

position:132989:-1
position: 132989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133047:-1
position: 133047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:132804-132892:-1:exon

position:132804:-1
position: 132804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:132892:-1
position: 132892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:131285-132590:-1:exon

position:132590:-1
position: 132590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100546611
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546611
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-10-like
translation: MGTGASCGRGQLSLPSLLLLLSLLAAPHSTGGQLRYAVPEELEHGAFVANLGEDLGLDVSTLSARRFRIVAGAGARQHLEVNLENGILFVNERIDREEVCETGGPCLLHLQLLVESPLELYRVEVEVLDINDHAPTFPWQEYVLEVAESAMLGARFPLESAQDPDVGTNSVHTYQLSPNGFFSLEVQTRSDASKFAELVLERALDREQQRTHRLLLTALDGGIPRRSGTAHVLVTVLDANDNIPAFDQPSYGVSLPEDAPAGTLVIQLNATDLDEGPNGEIEYSFSGHAPPSVRELFRVEPRSGQVLLKGPLDYERASLHELYVQAKDRGPSAVAVHCRVLVHLLDVNDNAPEVTLTSVSTPVQEDAPPGTVIAVISVLDRDSGDNGRVSCELSPSVPFELRSSFRNYYTLVTTEPLDREAVSEYNISIMARDMGSPALLTRSTLTVPVSDVNDNAPHFLQPSYSVYVMENNAPGASICSVSALDPDCQQNAYLSYSITDGHIHGMPVGTYVSINSDSGHMYALRSLDYEQIRSFQIQVQAQDAGFPPLSANVTVHIFVLDQNDNAPVIVSPMPRNGSVATELVPRSAGPGYLVGTVSAVDADAGLNSRLSYQLLQATDFTLFSLAPDTGELRTLRSFLEQDAARQRLVVQVRDGGQPSLSATVSLLLSVVETMPQTLSDFSNFSLPPEASSSSPLTLYLLVSLGSISFTFLLAILILTAIRCRGMRYPWQGDGCCCCPRPRRSPDGLKTSNLAAQPGASTATHLDVPDGGPPGYCYKLCLGPESAQSDFMFLKPCSLPRNNEKGPGNLPAAGKRSRPGQPLHGPKQIKQPNTDWLPPSMQRPALKSSQSLEDVGEIRRALQKEHERLCTLVTPVSEFQKASAGTNSIWAPQYGPLYPGHIPAPDYQHNVYIPGTPTLLSSKDGPLVPGQESKNSFSTFGKRKKMTTYYDMPDSVVINNDLK
SIO_010081: LOC100546611
subclass of: SO_0000673
so part of: LOC100546611
location: complement(join(132331..132590,132804..132892,132989..133047,134002..136482))
location: region:132331-136482:-1
so has part: feature:134002-136482:-1:exon
so has part: feature:132989-133047:-1:exon
so has part: feature:132804-132892:-1:exon
so has part: feature:132331-132590:-1:exon

XP_003210276.2
type: Protein
SIO_000068: ncbiprotein

position:132331:-1
position: 132331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136482:-1
position: 136482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134002-136482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132989-133047:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132804-132892:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:132331-132590:-1:exon

LOC104913215
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913215
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(147684..160322)
location: region:147684-160322:-1
so has part: feature:147684-160322:-1:exon

104913215
type: Gene
SIO_000068: ncbigene

position:147684:-1
position: 147684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160322:-1
position: 160322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147684-160322:-1:exon

LOC104913215
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913215
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913215
subclass of: SO_0000673
so part of: LOC104913215
location: complement(147684..150751)
location: region:147684-150751:-1
so has part: feature:147684-150751:-1:exon

position:150751:-1
position: 150751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147684-150751:-1:exon

LOC104913215
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913215
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913215
subclass of: SO_0000673
so part of: LOC104913215
location: complement(157482..158232)
location: region:157482-158232:-1
so has part: feature:157482-158232:-1:exon

position:157482:-1
position: 157482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158232:-1
position: 158232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157482-158232:-1:exon

LOC104913215
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913215
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913215
subclass of: SO_0000673
so part of: LOC104913215
location: complement(160017..160087)
location: region:160017-160087:-1
so has part: feature:160017-160087:-1:exon

position:160017:-1
position: 160017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:160087:-1
position: 160087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160017-160087:-1:exon

LOC104913215
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913215
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913215
subclass of: SO_0000673
so part of: LOC104913215
location: complement(160224..160322)
location: region:160224-160322:-1
so has part: feature:160224-160322:-1:exon

position:160224:-1
position: 160224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160224-160322:-1:exon

LOC100546919
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(186478..191569)
location: region:186478-191569:-1
so has part: feature:186478-191569:-1:exon
subclass of: SO_0000010

100546919
type: Gene
SIO_000068: ncbigene

position:186478:-1
position: 186478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191569:-1
position: 191569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:186478-191569:-1:exon

LOC100546919
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546919
product: protocadherin alpha-C1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010718800.2
SIO_010081: LOC100546919
subclass of: SO_0000673
so part of: LOC100546919
location: complement(186478..191569)
location: region:186478-191569:-1
so has part: feature:186478-191569:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:186478-191569:-1:exon

LOC100546919
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin alpha-C1
translation: MRVYWMVFCLICCTAKGQVVYSIAEGTERGAFVGNVAKDLGINAAALSARKFRMITGSSKQYFNINATTGVLSVNEPIDREQLCELKSTCLLNYELVLENPLELYRMEFKVLDVNDNSPSFPLSEYRVSVPEFLSPGARFALPTAQDLDEGTNGVQNYILDLDDHFHLEMQMRGDGSVYPELVLKKALDREQQATHRLVLTAKDGGDPPRSGDVPVVVTVLDTNDNAPEFEQSVYRASVLENSPSGTLVVQVHATDLDEGPNGEVMYLFSNATAADLQQMFLIHPHTGEVTVSGDLAVQRPLLEMLIEARDKGAFALSSTAKLLVEITDVNNHGPEITIASFSNPIPEDAVPGTVIALLSIVDKDPGENGKVACQIPDNLPFQLKPSLENYYSLVTSGLLDRELISGYNITITATDLGSPPITTQQTLWVQISDVNDNPPVFAAGTFDVFVEENNPLGAFLYQVSASDLDIGENGQISYILRNSTVAGSALTSFLSVSLANGSIYAKRAFDFEQLRSFHFQVEAKDNGSPALSAAMTVNVYISDQNDNAPAILYPISQNGSVAVEVVPRLADEDYLVTKVVADDEDSAENAWLSYHLAHSTDFTLFHLAPHSGELRTSRSLRSTDLLKHKVVVVVRDHGEPPLSSTVTVGILLADTLPQALPDFDDNGEPRPLLNATNIYLIVSLACVSFIFTVFLLFLAIARLCHCSACHRQGCCCSVCCCSADEYEKYQYSVHMLPSSHLPPDVLEVTGVGKLTHTYLYRASVGLGLENSSIPNGDAGNVPNGSRLQVPGPCIQVQQIQSDRLSAVLMVSTSSFHLFSPSHVATKKLNQKSRCNFMVPIGNFLSFYIFPKARI
SIO_010081: LOC100546919
subclass of: SO_0000673
so part of: LOC100546919
location: complement(188869..191436)
location: region:188869-191436:-1
so has part: feature:188869-191436:-1:exon

XP_010717102.1
type: Protein
SIO_000068: ncbiprotein

position:188869:-1
position: 188869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:191436:-1
position: 191436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188869-191436:-1:exon

LOC100546766
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546766
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(200622..244907)
location: region:200622-244907:-1
so has part: feature:200622-244907:-1:exon
subclass of: SO_0000010

100546766
type: Gene
SIO_000068: ncbigene

position:200622:-1
position: 200622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244907:-1
position: 244907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200622-244907:-1:exon

LOC100546766
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546766
product: protocadherin alpha-C2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_019620339.2
SIO_010081: LOC100546766
subclass of: SO_0000673
so part of: LOC100546766
location: complement(join(200622..203538,232552..232640,234524..234582,242430..242459,242631..244907))
location: region:200622-244907:-1
so has part: feature:242631-244907:-1:exon
so has part: feature:242430-242459:-1:exon
so has part: feature:234524-234582:-1:exon
so has part: feature:232552-232640:-1:exon
so has part: feature:200622-203538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242631-244907:-1:exon

position:242631:-1
position: 242631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:242430-242459:-1:exon

position:242430:-1
position: 242430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242459:-1
position: 242459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234524-234582:-1:exon

position:234524:-1
position: 234524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234582:-1
position: 234582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:232552-232640:-1:exon

position:232552:-1
position: 232552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232640:-1
position: 232640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:200622-203538:-1:exon

position:203538:-1
position: 203538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100546766
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546766
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protocadherin alpha-C2-like
translation: MDREVLCELSPTCFLSLELVIEQPIEVHNVEVEVLDINDNAPRFPRQDYRLEISESAVPGARFHIESAQDPDVGTNSVQSYQLSPSHHFALDLKGFQSGSKLLELVLQQPLDREQSALLQLVLTAVDGGDPPRSGTAQISVRVVDTNDNPPAFDRSTYTVNLLENSPPGTLVVKLNASDPDEGSNGDVIYSFGSYTPQKVRQLFRVDPHSGEVRVNGTLDYEEASSYEIYVQATDQGPVSMAGHCKVLVNIVDANDNVPEVVLTSLYSPVPEDAKPGTVVALMSVTDQDSGLNKQVSLRIPPGLPFMLNSFKNSYTLVTQGNLDREKAAAYNITVTATDSGSPPLSSQKVIHVVISDINDNPPLFEEPVYSVYVPENNPLGVLLCTIKATDPDVAENAYISYSLLDGEIEGLPAASFVTIKSDSGDMYAVKSFDYETLREFHVVVQAQDAGIPSLSSTVTVYIYVVDVNDHAPEILYPTSTNTSAALEMIPRSAHAGYLVTKIIAIDGDSGXNAWLFFYIVQTSDPDLFRIELHTGEIRTTRKLREESTPTFNLTVEVRDNGEPPMSSSVAITVAVVDRVSKIIPDTRRHIRSPSNYSEITLYLIIALCSISFVFLFTIIGLTVIKCYRYSLYGDSCCTGFCGVRERCPAELYKQANNNIDARLPHGLKVQPHFIEVRGNGSLTKTYCYKACLTAGSGSDTFMFYNTCGPTGTVPSAVVTERHLTGQSGQSAQNLIILKNDSITPNEVNTGSFRVHLPKHPNPDWRYSASLRAGMQSAVHLEEAGILRGGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKFGPGNSKQGGPGELPDKFIIPGSPAIISIRQEPPNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTENSDQ
SIO_010081: LOC100546766
subclass of: SO_0000673
so part of: LOC100546766
location: complement(join(203228..203538,232552..232640,234524..234582,242430..242459,242631..244870))
location: region:203228-244870:-1
so has part: feature:242631-244870:-1:exon
so has part: feature:242430-242459:-1:exon
so has part: feature:234524-234582:-1:exon
so has part: feature:232552-232640:-1:exon
so has part: feature:203228-203538:-1:exon

XP_019475884.1
type: Protein
SIO_000068: ncbiprotein

position:203228:-1
position: 203228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244870:-1
position: 244870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242631-244870:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:242430-242459:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234524-234582:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:232552-232640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:203228-203538:-1:exon

LOC116217198
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217198
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(254784..289342)
location: region:254784-289342:-1
so has part: feature:254784-289342:-1:exon

116217198
type: Gene
SIO_000068: ncbigene

position:254784:-1
position: 254784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289342:-1
position: 289342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254784-289342:-1:exon

LOC116217198
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC116217198
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116217198
subclass of: SO_0000673
so part of: LOC116217198
location: complement(254784..254861)
location: region:254784-254861:-1
so has part: feature:254784-254861:-1:exon

position:254861:-1
position: 254861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254784-254861:-1:exon

LOC116217198
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC116217198
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116217198
subclass of: SO_0000673
so part of: LOC116217198
location: complement(257778..257970)
location: region:257778-257970:-1
so has part: feature:257778-257970:-1:exon

position:257778:-1
position: 257778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257970:-1
position: 257970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257778-257970:-1:exon

LOC104913214
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(287157..313925)
location: region:287157-313925:-1
so has part: feature:287157-313925:-1:exon
subclass of: SO_0000010

104913214
type: Gene
SIO_000068: ncbigene

position:287157:-1
position: 287157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313925:-1
position: 313925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287157-313925:-1:exon

LOC104913214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913214
product: protocadherin beta-15-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 116 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019620340.2
SIO_010081: LOC104913214
subclass of: SO_0000673
so part of: LOC104913214
location: complement(join(287157..287667,301905..302014,311456..313925))
location: region:287157-313925:-1
so has part: feature:311456-313925:-1:exon
so has part: feature:301905-302014:-1:exon
so has part: feature:287157-287667:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:311456-313925:-1:exon

position:311456:-1
position: 311456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301905-302014:-1:exon

position:301905:-1
position: 301905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302014:-1
position: 302014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287157-287667:-1:exon

position:287667:-1
position: 287667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217198
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC116217198
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116217198
subclass of: SO_0000673
so part of: LOC116217198
location: complement(287692..287777)
location: region:287692-287777:-1
so has part: feature:287692-287777:-1:exon

position:287692:-1
position: 287692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287777:-1
position: 287777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287692-287777:-1:exon

LOC116217198
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC116217198
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116217198
subclass of: SO_0000673
so part of: LOC116217198
location: complement(288027..289342)
location: region:288027-289342:-1
so has part: feature:288027-289342:-1:exon

position:288027:-1
position: 288027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:288027-289342:-1:exon

LOC104913214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like isoform X1
translation: MEAGGKGRPWRRGTASGSRSGGGERRVLLWLVCVCVWESGAETLRYSVWEEMARDSSVGNVARDLGLSPSQLAARKARVVSEGSEQHFRLDPHSGVLTVTETLDRERICPHSESCALFFKLSFENPVQLIRGEVEVRDVNDNSPVFPQKEVVLEIPEMASTGSRFPLEEARDKDLGINGLQNYSLSPNSHFSLALETGKGGAEFVKLVLERPLDREEHRELHLVLTATDGGSPPRSGTVEVRVVVLDANDNMPVFSREVYEVRVAENSPPGQLVVRVSAADPDEGSNGKVEYEFTSEESGNLFYLNAATGEIRVLGNLDFEETEYHDIEVKATDGGGLSAHCKVHVEVLDVNDNAPEIELSSVSASVPEDAPPGTVVALLSVRDRDSGDNGRPECAIEGDVPFRLTAAFADHYELRTSAALDRETTAEYNVSIVAADRGRARLSARESVRVRIGDVNDNAPRFTQAAYSMWVSENEAGAVRLGSVKATDADAGANGRVRYALVREEGEERPAVSVDAESGDVSVVRPLDYEEVRAVEVTVRAADGGSPPRSATALLRVLVRDENDNAPVVLHPPADGGAALGELVPRRARAGYLVAKVVAVDADAGQNAWLCYELAKATEPGLFRVGLHSGEVRTARAVGERDAARHRLVVLVRDRGRPPRSASATLAVALADGFSEGRLRASEEAPAAEPDGRLTLYLSVCLACVSALFVAGAAAAVAAKVRRARRGEPGTLPTFPRSAADSGAGSLPRSYVYDVRLAAGTVDSEFRFLGPLFPCFPAGLPQGAAEQRSSLCSAGLGQEEGDWAVQGRAPLCEGTAPRAAEENGSLDQSPWLSHQ
SIO_010081: LOC104913214
subclass of: SO_0000673
so part of: LOC104913214
location: complement(join(301925..302014,311456..313876))
location: region:301925-313876:-1
so has part: feature:311456-313876:-1:exon
so has part: feature:301925-302014:-1:exon

XP_019475885.1
type: Protein
SIO_000068: ncbiprotein

position:301925:-1
position: 301925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313876:-1
position: 313876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311456-313876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301925-302014:-1:exon

LOC104913214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913214
product: protocadherin beta-15-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 112 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_010718804.3
SIO_010081: LOC104913214
subclass of: SO_0000673
so part of: LOC104913214
location: complement(join(310010..310655,311456..313925))
location: region:310010-313925:-1
so has part: feature:311456-313925:-1:exon
so has part: feature:310010-310655:-1:exon

position:310010:-1
position: 310010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311456-313925:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310010-310655:-1:exon

position:310655:-1
position: 310655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like isoform X2
translation: MEAGGKGRPWRRGTASGSRSGGGERRVLLWLVCVCVWESGAETLRYSVWEEMARDSSVGNVARDLGLSPSQLAARKARVVSEGSEQHFRLDPHSGVLTVTETLDRERICPHSESCALFFKLSFENPVQLIRGEVEVRDVNDNSPVFPQKEVVLEIPEMASTGSRFPLEEARDKDLGINGLQNYSLSPNSHFSLALETGKGGAEFVKLVLERPLDREEHRELHLVLTATDGGSPPRSGTVEVRVVVLDANDNMPVFSREVYEVRVAENSPPGQLVVRVSAADPDEGSNGKVEYEFTSEESGNLFYLNAATGEIRVLGNLDFEETEYHDIEVKATDGGGLSAHCKVHVEVLDVNDNAPEIELSSVSASVPEDAPPGTVVALLSVRDRDSGDNGRPECAIEGDVPFRLTAAFADHYELRTSAALDRETTAEYNVSIVAADRGRARLSARESVRVRIGDVNDNAPRFTQAAYSMWVSENEAGAVRLGSVKATDADAGANGRVRYALVREEGEERPAVSVDAESGDVSVVRPLDYEEVRAVEVTVRAADGGSPPRSATALLRVLVRDENDNAPVVLHPPADGGAALGELVPRRARAGYLVAKVVAVDADAGQNAWLCYELAKATEPGLFRVGLHSGEVRTARAVGERDAARHRLVVLVRDRGRPPRSASATLAVALADGFSEGRLRASEEAPAAEPDGRLTLYLSVCLACVSALFVAGAAAAVAAKVRRARRGEPGTLPTFPRSAADSGAGSLPRSYVYDVRLAAGTVDSEFRFLGPLFPCFPAGLPQGAAEQRSSLCSAGLGQEEGDWAVQGRSPFPEDTAPRPAEENTSLGQCPWLTHL
SIO_010081: LOC104913214
subclass of: SO_0000673
so part of: LOC104913214
location: complement(join(310566..310655,311456..313876))
location: region:310566-313876:-1
so has part: feature:311456-313876:-1:exon
so has part: feature:310566-310655:-1:exon

XP_010717106.1
type: Protein
SIO_000068: ncbiprotein

position:310566:-1
position: 310566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:311456-313876:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:310566-310655:-1:exon

LOC100550010
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100550010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<314052..321351)
location: region:314052-321351:-1
so has part: feature:314052-321351:-1:exon
subclass of: SO_0000010

100550010
type: Gene
SIO_000068: ncbigene

position:314052:-1
position: 314052
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:321351:-1
position: 321351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314052-321351:-1:exon

LOC100550010
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100550010
product: protocadherin beta-8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555644.1
SIO_010081: LOC100550010
subclass of: SO_0000673
so part of: LOC100550010
location: complement(join(<314052..315315,315936..316133,316271..316464,316683..316823,320345..321351))
location: region:314052-321351:-1
so has part: feature:320345-321351:-1:exon
so has part: feature:316683-316823:-1:exon
so has part: feature:316271-316464:-1:exon
so has part: feature:315936-316133:-1:exon
so has part: feature:314052-315315:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:320345-321351:-1:exon

position:320345:-1
position: 320345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316683-316823:-1:exon

position:316683:-1
position: 316683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316823:-1
position: 316823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316271-316464:-1:exon

position:316271:-1
position: 316271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316464:-1
position: 316464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:315936-316133:-1:exon

position:315936:-1
position: 315936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:316133:-1
position: 316133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:314052-315315:-1:exon

position:315315:-1
position: 315315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100550010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100550010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-8-like
translation: MNVELVLQQPLDREEMPELDFTLIAADGGSPPRTGTAQVHIIVLDINDNKPNFTQDTYNGQVVENAPEGSLVLRVLAMDADVGINGDISYQFIQTVGQSQPSFTINRKNGEIRVKEHLDFEVAQKHELSVQATDSGGLWALCHVLIEVMDMNDNAPEIVVSSFNSPIPENAAPGTVVALFDVRDQDSGVNGEISCALEEQLPFSLRPAFKNYYELVTVSALDREKTARYSVIVTAADAGSPRLSSSRTFTVDISDVNDNAPVFNQTSYTMYVHENNVPALLVGAVKATDADAGANGKVSYSLVPIGIVKVFPSQGSSCVSQDAESKGKNWEKEDLPAVSEDQIGDHVKNVQIILKALLRHLETGHVIGVNQHGFTHGKSCLTSLVTFMMKLQNQWINEEQLTSSMWTCDEVPHDIWDHCWELFNIFGGDMASGIECTLSSIADDTGLSDGVDMLEGRDAIQRNLVRLKRWSHANLMKINQDNGRLVVAERLDREEMCGRSRTCTLAFELLLADPLQFFPIEVSVEDINDHSPVFQDERVTFKIPETSDVGFRFPVAAAQDLDIGSNDIQAYSIVPENEYFTVFYQTQNASEMHVDLVLEKPLDREEMPELDFTLVAADGGSPPTTGTTRIHIIVLDVNDNAPIFTQKEYVGHVLEDAAEGSVVLRVLANDADDGINGDITYEFTQSGGHTYSDFTVDTKSGEIQVMKSLDFETTQKYEFRLRAVDGGGLSTMCKVVVEVMDVNDNAPEIVVSSFSSPIPENAAPGTVVALFAVRDQDSGVNGEISCALEEQLPFSLRPAFKNYYELVTVSALDREERAQHTMVVTAADAGSPRLSSSHTFTVNISDVNDNAPVFNQTSYTMYVHENNVPALLVGAVKATDADAGANGKVSYPWCRPIPQTEEP
SIO_010081: LOC100550010
subclass of: SO_0000673
so part of: LOC100550010
location: complement(join(<314052..315315,315936..316133,316271..316464,316683..316823,320345..321256))
location: region:314052-321256:-1
so has part: feature:320345-321256:-1:exon
so has part: feature:316683-316823:-1:exon
so has part: feature:316271-316464:-1:exon
so has part: feature:315936-316133:-1:exon
so has part: feature:314052-315315:-1:exon

XP_031411504.1
type: Protein
SIO_000068: ncbiprotein

position:321256:-1
position: 321256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:320345-321256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316683-316823:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:316271-316464:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315936-316133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314052-315315:-1:exon

LOC116217192
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(321737..335164)
location: region:321737-335164:-1
so has part: feature:321737-335164:-1:exon
subclass of: SO_0000010

116217192
type: Gene
SIO_000068: ncbigene

position:321737:-1
position: 321737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335164:-1
position: 335164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:321737-335164:-1:exon

LOC116217192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC116217192
product: putative protocadherin beta-18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_031555633.1
SIO_010081: LOC116217192
subclass of: SO_0000673
so part of: LOC116217192
location: complement(join(321737..326487,332294..335164))
location: region:321737-335164:-1
so has part: feature:332294-335164:-1:exon
so has part: feature:321737-326487:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:332294-335164:-1:exon

position:332294:-1
position: 332294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:321737-326487:-1:exon

position:326487:-1
position: 326487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC116217192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protocadherin beta-18
translation: MDFTLVATDGGSPPRSGSTQIHIIVLDVNDNAPTFTQKLYNAKIFENAPEGSVVLRVVATDADEGINGDISYQFSQAAVQILSAFIIDPSSGEIRITKPLDYEVAQKHEFSVRAVDGGRLSALSKVLVEVVDVNDNAPEIVVSSFNSPIPENAAPGTVVALFDVRDQDSGVNGEISCALEEQLPFSLRPAFKNYYELVTVSALDREKTARYSVIVTAADAGSPRLSSSHTFTVDISDVNDNAPVFNQTSYTMYVHENNVPALLVGAVKATDADAGANGKVSYSLVPAHPPEREPCSCVSVNSESGAVFVLRPLDYEQLRQLEVVVSAADAGSPPLSSTVGVRLLVVDENDNAPLVLHPSAQDGSPPWSEPVPAWAEAGDLVSKVVAVDADSGQNSWLSYRLLRATEPGLFAVGAQSGEVRLRRPPTERDAAKQKLVVLVRDNGRPPLSATAALSVLLLHGSWDAQLPQQSPAAHEEDGALTASLIAALVLVSLLFLVSAAAFAACKACKSKEPSSGHVLYGPSGVQSYVADGAAAGTLPHAYCYELSLTTGSGNSEFKFLKPVLPSLPAQHCSTAVAGDDAEHFPAVPVAAGDADVESPGMQSVGHFNGF
SIO_010081: LOC116217192
subclass of: SO_0000673
so part of: LOC116217192
location: complement(333248..335080)
location: region:333248-335080:-1
so has part: feature:333248-335080:-1:exon

XP_031411493.1
type: Protein
SIO_000068: ncbiprotein

position:333248:-1
position: 333248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:335080:-1
position: 335080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333248-335080:-1:exon

LOC100538867
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100538867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(337133..340546)
location: region:337133-340546:-1
so has part: feature:337133-340546:-1:exon
subclass of: SO_0000010

100538867
type: Gene
SIO_000068: ncbigene

position:337133:-1
position: 337133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340546:-1
position: 340546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337133-340546:-1:exon

LOC100538867
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100538867
product: protocadherin beta-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555645.1
SIO_010081: LOC100538867
subclass of: SO_0000673
so part of: LOC100538867
location: complement(join(337133..337372,337923..338063,339114..340182,340329..340546))
location: region:337133-340546:-1
so has part: feature:340329-340546:-1:exon
so has part: feature:339114-340182:-1:exon
so has part: feature:337923-338063:-1:exon
so has part: feature:337133-337372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340329-340546:-1:exon

position:340329:-1
position: 340329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:339114-340182:-1:exon

position:339114:-1
position: 339114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340182:-1
position: 340182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:337923-338063:-1:exon

position:337923:-1
position: 337923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338063:-1
position: 338063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:337133-337372:-1:exon

position:337372:-1
position: 337372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100538867
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100538867
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin beta-15-like
translation: MVVREGRCGRRQRALLCCVLVAVWEAAWGQLRYSVPEELPKGSFVGDVAEDLALEMAALHDRGTRILDKGRTHADPLQFFPIEVSVEDINDHSPVFPDERVTFRILETSDPGSRFPVEAAQDLDVGSNDIQAYSIVPENEFFAVSYQTHGESNNVLELVLQLPLDREEMPELDFTLVATDGGSPPRSGSTQIHIIVLDVNDNAPTFTQKLYNAKIFENAPEGSVVLRVVATDADEGINGDISYQFSQAAVQILSAFIIDPSSGEIRITKPLDYEVAQKNEFSVRAVDGGGLSALSKVLVEVVDVNDNAPDIVVSSFNSPIPENAAPGTVVALFAVRDQDSGVNGEISCALEEQLPFSLRPAFKNYYELVTVSALDREKTARYSVIVTAADAGSPRLSSSHTFTVDISDVNDNAPVFNQTSYTMYVHENNIGIVKVFPSKGSSCVAQAAESKGKNWEKEDLPTVSEDQIGDHVKNLQESLLGVVLFNIFGGDMASGIECTLSSIADDTRLSDGVDMLEGRDAIQRNLVRLKRWSHANLMKINQDKCEDLHLLQANP
SIO_010081: LOC100538867
subclass of: SO_0000673
so part of: LOC100538867
location: complement(join(337133..337372,337923..338063,339114..340182,340329..340546))
location: region:337133-340546:-1
so has part: feature:340329-340546:-1:exon
so has part: feature:339114-340182:-1:exon
so has part: feature:337923-338063:-1:exon
so has part: feature:337133-337372:-1:exon

XP_031411505.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:340329-340546:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:339114-340182:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:337923-338063:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337133-337372:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 350317..350416
location: region:350317-350416:1
so has part: feature:350317-350416:1:region

position:350317:1
position: 350317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350416:1
position: 350416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350317-350416:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 351495..351594
location: region:351495-351594:1
so has part: feature:351495-351594:1:region

position:351495:1
position: 351495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351594:1
position: 351594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351495-351594:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 354125..354224
location: region:354125-354224:1
so has part: feature:354125-354224:1:region

position:354125:1
position: 354125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354224:1
position: 354224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354125-354224:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 357754..357853
location: region:357754-357853:1
so has part: feature:357754-357853:1:region

position:357754:1
position: 357754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357853:1
position: 357853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357754-357853:1:region

LOC104913216
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913216
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 357861..360367
location: region:357861-360367:1
so has part: feature:357861-360367:1:exon

104913216
type: Gene
SIO_000068: ncbigene

position:357861:1
position: 357861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360367:1
position: 360367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357861-360367:1:exon

LOC104913216
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913216
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913216
subclass of: SO_0000673
so part of: LOC104913216
location: 357861..358648
location: region:357861-358648:1
so has part: feature:357861-358648:1:exon

position:358648:1
position: 358648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357861-358648:1:exon

LOC104913216
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913216
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913216
subclass of: SO_0000673
so part of: LOC104913216
location: 360336..360367
location: region:360336-360367:1
so has part: feature:360336-360367:1:exon

position:360336:1
position: 360336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360336-360367:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 381375..381474
location: region:381375-381474:1
so has part: feature:381375-381474:1:region

position:381375:1
position: 381375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:381474:1
position: 381474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:381375-381474:1:region

LOC109370008
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370008
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(409404..413490)
location: region:409404-413490:-1
so has part: feature:409404-413490:-1:exon
subclass of: SO_0000010

109370008
type: Gene
SIO_000068: ncbigene

position:409404:-1
position: 409404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413490:-1
position: 413490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:409404-413490:-1:exon

LOC109370008
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109370008
product: ribosome biogenesis protein BOP1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019620293.2
SIO_010081: LOC109370008
subclass of: SO_0000673
so part of: LOC109370008
location: complement(join(409404..409494,412748..413022,413372..413490))
location: region:409404-413490:-1
so has part: feature:413372-413490:-1:exon
so has part: feature:412748-413022:-1:exon
so has part: feature:409404-409494:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:413372-413490:-1:exon

position:413372:-1
position: 413372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412748-413022:-1:exon

position:412748:-1
position: 412748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413022:-1
position: 413022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:409404-409494:-1:exon

position:409494:-1
position: 409494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109370008
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109370008
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosome biogenesis protein BOP1-like
translation: MEQPLELESDDDLTDSEESVYSGLEDSGSDSTNSSAGEEEDEEEREEPGNGAAPEVRSGDGGRLPGWGALLEHCARRWAPIQGRLGTAGRAQRRGKTDSEQGERIDSREPFGKRSPKAHLCRTN
SIO_010081: LOC109370008
subclass of: SO_0000673
so part of: LOC109370008
location: complement(join(409404..409494,412748..413022,413372..413380))
location: region:409404-413380:-1
so has part: feature:413372-413380:-1:exon
so has part: feature:412748-413022:-1:exon
so has part: feature:409404-409494:-1:exon

XP_019475838.1
type: Protein
SIO_000068: ncbiprotein

position:413380:-1
position: 413380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413372-413380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412748-413022:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:409404-409494:-1:exon

LOC116217194
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217194
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(427634..429795)
location: region:427634-429795:-1
so has part: feature:427634-429795:-1:exon
subclass of: SO_0000011

116217194
type: Gene
SIO_000068: ncbigene

position:427634:-1
position: 427634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:429795:-1
position: 429795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427634-429795:-1:exon

LOC116217194
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217194
product: uncharacterized LOC116217194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XR_004161364.1
SIO_010081: LOC116217194
subclass of: SO_0000673
so part of: LOC116217194
location: complement(join(427634..427819,429653..429795))
location: region:427634-429795:-1
so has part: feature:429653-429795:-1:exon
so has part: feature:427634-427819:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:429653-429795:-1:exon

position:429653:-1
position: 429653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:427634-427819:-1:exon

position:427819:-1
position: 427819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 431630..431729
location: region:431630-431729:1
so has part: feature:431630-431729:1:region

position:431630:1
position: 431630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431729:1
position: 431729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431630-431729:1:region

LOC104913217
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 453231..455603
location: region:453231-455603:1
so has part: feature:453231-455603:1:exon
subclass of: SO_0000010

104913217
type: Gene
SIO_000068: ncbigene

position:453231:1
position: 453231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455603:1
position: 455603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453231-455603:1:exon

LOC104913217
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913217
product: ankyrin repeat and KH domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 214 samples with support for all annotated introns
transcript id: XM_010718818.3
SIO_010081: LOC104913217
subclass of: SO_0000673
so part of: LOC104913217
location: join(453231..453418,454589..454736,455421..455603)
location: region:453231-455603:1
so has part: feature:453231-453418:1:exon
so has part: feature:454589-454736:1:exon
so has part: feature:455421-455603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453231-453418:1:exon

position:453418:1
position: 453418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454589-454736:1:exon

position:454589:1
position: 454589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454736:1
position: 454736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:455421-455603:1:exon

position:455421:1
position: 455421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913217
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like
translation: MRAENNHNAGQVDNRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAAASGGYVDIVKLLLVHCADVNAQSSTGNKLKK
SIO_010081: LOC104913217
subclass of: SO_0000673
so part of: LOC104913217
location: join(453378..453418,454589..454736,455421..455588)
location: region:453378-455588:1
so has part: feature:453378-453418:1:exon
so has part: feature:454589-454736:1:exon
so has part: feature:455421-455588:1:exon

XP_010717120.1
type: Protein
SIO_000068: ncbiprotein

position:453378:1
position: 453378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455588:1
position: 455588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453378-453418:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454589-454736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:455421-455588:1:exon

LOC100549377
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100549377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 479007..495873
location: region:479007-495873:1
so has part: feature:479007-495873:1:exon
subclass of: SO_0000010

100549377
type: Gene
SIO_000068: ncbigene

position:479007:1
position: 479007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495873:1
position: 495873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479007-495873:1:exon

LOC100549377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100549377
product: electrogenic sodium bicarbonate cotransporter 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_019620276.2
SIO_010081: LOC100549377
subclass of: SO_0000673
so part of: LOC100549377
location: join(479007..479480,480969..481129,481308..481451,481559..481620,481975..482132,483394..483481,483752..483906,484523..484639,484854..485028,485927..486060,486186..486457,488087..488442,488580..488693,489994..490155,490968..491146,491340..491412,493911..493979,494616..494789,494924..495873)
location: region:479007-495873:1
so has part: feature:479007-479480:1:exon
so has part: feature:480969-481129:1:exon
so has part: feature:481308-481451:1:exon
so has part: feature:481559-481620:1:exon
so has part: feature:481975-482132:1:exon
so has part: feature:483394-483481:1:exon
so has part: feature:483752-483906:1:exon
so has part: feature:484523-484639:1:exon
so has part: feature:484854-485028:1:exon
so has part: feature:485927-486060:1:exon
so has part: feature:486186-486457:1:exon
so has part: feature:488087-488442:1:exon
so has part: feature:488580-488693:1:exon
so has part: feature:489994-490155:1:exon
so has part: feature:490968-491146:1:exon
so has part: feature:491340-491412:1:exon
so has part: feature:493911-493979:1:exon
so has part: feature:494616-494789:1:exon
so has part: feature:494924-495873:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479007-479480:1:exon

position:479480:1
position: 479480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:480969-481129:1:exon

position:480969:1
position: 480969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481129:1
position: 481129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:481308-481451:1:exon

position:481308:1
position: 481308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481451:1
position: 481451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:481559-481620:1:exon

position:481559:1
position: 481559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481620:1
position: 481620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:481975-482132:1:exon

position:481975:1
position: 481975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482132:1
position: 482132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:483394-483481:1:exon

position:483394:1
position: 483394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483481:1
position: 483481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:483752-483906:1:exon

position:483752:1
position: 483752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:483906:1
position: 483906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:484523-484639:1:exon

position:484523:1
position: 484523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484639:1
position: 484639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:484854-485028:1:exon

position:484854:1
position: 484854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485028:1
position: 485028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:485927-486060:1:exon

position:485927:1
position: 485927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486060:1
position: 486060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:486186-486457:1:exon

position:486186:1
position: 486186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486457:1
position: 486457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:488087-488442:1:exon

position:488087:1
position: 488087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488442:1
position: 488442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:488580-488693:1:exon

position:488580:1
position: 488580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488693:1
position: 488693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:489994-490155:1:exon

position:489994:1
position: 489994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490155:1
position: 490155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:490968-491146:1:exon

position:490968:1
position: 490968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491146:1
position: 491146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:491340-491412:1:exon

position:491340:1
position: 491340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491412:1
position: 491412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:493911-493979:1:exon

position:493911:1
position: 493911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493979:1
position: 493979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:494616-494789:1:exon

position:494616:1
position: 494616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494789:1
position: 494789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:494924-495873:1:exon

position:494924:1
position: 494924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100549377
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100549377
product: electrogenic sodium bicarbonate cotransporter 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010718819.3
SIO_010081: LOC100549377
subclass of: SO_0000673
so part of: LOC100549377
location: join(479008..479480,480969..481129,481308..481451,481559..481620,481975..482132,483394..483481,483752..483906,484523..484639,484854..485028,485927..486060,486186..486457,488087..488442,488580..488693,489994..490155,490968..491146,491340..491412,493911..493979,494616..494789,494924..495082,495450..495873)
location: region:479008-495873:1
so has part: feature:479008-479480:1:exon
so has part: feature:480969-481129:1:exon
so has part: feature:481308-481451:1:exon
so has part: feature:481559-481620:1:exon
so has part: feature:481975-482132:1:exon
so has part: feature:483394-483481:1:exon
so has part: feature:483752-483906:1:exon
so has part: feature:484523-484639:1:exon
so has part: feature:484854-485028:1:exon
so has part: feature:485927-486060:1:exon
so has part: feature:486186-486457:1:exon
so has part: feature:488087-488442:1:exon
so has part: feature:488580-488693:1:exon
so has part: feature:489994-490155:1:exon
so has part: feature:490968-491146:1:exon
so has part: feature:491340-491412:1:exon
so has part: feature:493911-493979:1:exon
so has part: feature:494616-494789:1:exon
so has part: feature:494924-495082:1:exon
so has part: feature:495450-495873:1:exon

position:479008:1
position: 479008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479008-479480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480969-481129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481308-481451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481559-481620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481975-482132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483394-483481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:483752-483906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484523-484639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484854-485028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485927-486060:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:486186-486457:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488087-488442:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:488580-488693:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:489994-490155:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:490968-491146:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:491340-491412:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:493911-493979:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:494616-494789:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:494924-495082:1:exon

position:495082:1
position: 495082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:495450-495873:1:exon

position:495450:1
position: 495450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100549377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100549377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electrogenic sodium bicarbonate cotransporter 1 isoform X2
translation: MRAEVPGPASMAPAVQPGQGDSATCSSELFHTAVSHSIFSPSISSTAERISAILQQEEVGDRKWPPLFIQLNELFSTASGLAWRETARWIKFEEKVEDGGERWSTPHVPVLHLHSLFELRTCLQEGTVLLDLDAHSFKEIIEKVLSAQPDVWDPELQDCLATLLLCQPLHRTTTAPLRVLTELSLSPCRGKAKSCPEPRTQFSETPLKEQLRNQFKKKLLPGAEVASVMVGEVDFLKKPFPVFLRLREAVTLGSLAEVALPSRFLFILLGPQAKVKAYHEIGRAMATLLTDELFQRIAWQAKHQQDLIAGIDEFLDELTVLPPGKWDLSDRIPPTRCLSSPNKRISMHLREWKSHCNGNTTAAKDRLSLAHLHTSEELERTGRLFGGLIRDIRRKAHWYRSDFSDAMHIQCLSAVLYIYLATVTNAITFGGMLGDATANMQGVLESFLGTAFTGSIFCLFSGQPLTILSSTGPVLVFERLLFSFSEDYGLDYLEFRLWIGLWVAFFGLVLVATEASHLVQYFTRFTEEGFCALISLIFIYDSLKKMLSLAEAFPINWHYRADDVTLYSCTCNLSVPGHVTAGNNTLYPPPTALQQVQTLLLGGDTEHQAAHTGPLAPVPHPWLISHLHPSHIPQPPAVWAALSRAQCLGRGGHLLGNSCPYVPDIALLSFLLFGGTFLCCTTLKHFKSSRYFPTGFRKLVSDFSIILAILIFCAIDAALGLETPKLLVPSELKPTNPMRGWIVFPFGANPWWICLAAVVPAILVTILIFMDQQITAVILNRKEYKLQKGAGFHLDFLCVSLLMIVTSVMGLPWYVSATVISLAHMESLRKESTASAPGEQPEFLGIREQRLTGLVVFILTGVSVFMAPILKYIPMPVLYGVFLHMGVAALNSIQFMDRVRLLLMPAKHQPDHLYLRHVPLRRVHLFTFIQLLCLAMLWVIKSTMAAIVFPVMLLALVGIRKALECIFSLHDLSWLDNIMPAAARKEADGKLHRKQEKQESNADEDSELMHHQGREINISVN
SIO_010081: LOC100549377
subclass of: SO_0000673
so part of: LOC100549377
location: join(479218..479480,480969..481129,481308..481451,481559..481620,481975..482132,483394..483481,483752..483906,484523..484639,484854..485028,485927..486060,486186..486457,488087..488442,488580..488693,489994..490155,490968..491146,491340..491412,493911..493979,494616..494789,494924..495082,495450..495500)
location: region:479218-495500:1
so has part: feature:479218-479480:1:exon
so has part: feature:480969-481129:1:exon
so has part: feature:481308-481451:1:exon
so has part: feature:481559-481620:1:exon
so has part: feature:481975-482132:1:exon
so has part: feature:483394-483481:1:exon
so has part: feature:483752-483906:1:exon
so has part: feature:484523-484639:1:exon
so has part: feature:484854-485028:1:exon
so has part: feature:485927-486060:1:exon
so has part: feature:486186-486457:1:exon
so has part: feature:488087-488442:1:exon
so has part: feature:488580-488693:1:exon
so has part: feature:489994-490155:1:exon
so has part: feature:490968-491146:1:exon
so has part: feature:491340-491412:1:exon
so has part: feature:493911-493979:1:exon
so has part: feature:494616-494789:1:exon
so has part: feature:494924-495082:1:exon
so has part: feature:495450-495500:1:exon

XP_010717121.1
type: Protein
SIO_000068: ncbiprotein

position:479218:1
position: 479218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495500:1
position: 495500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479218-479480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480969-481129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481308-481451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481559-481620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481975-482132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483394-483481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:483752-483906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484523-484639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484854-485028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485927-486060:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:486186-486457:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488087-488442:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:488580-488693:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:489994-490155:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:490968-491146:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:491340-491412:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:493911-493979:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:494616-494789:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:494924-495082:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:495450-495500:1:exon

LOC100549377
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100549377
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: electrogenic sodium bicarbonate cotransporter 1 isoform X1
translation: MRAEVPGPASMAPAVQPGQGDSATCSSELFHTAVSHSIFSPSISSTAERISAILQQEEVGDRKWPPLFIQLNELFSTASGLAWRETARWIKFEEKVEDGGERWSTPHVPVLHLHSLFELRTCLQEGTVLLDLDAHSFKEIIEKVLSAQPDVWDPELQDCLATLLLCQPLHRTTTAPLRVLTELSLSPCRGKAKSCPEPRTQFSETPLKEQLRNQFKKKLLPGAEVASVMVGEVDFLKKPFPVFLRLREAVTLGSLAEVALPSRFLFILLGPQAKVKAYHEIGRAMATLLTDELFQRIAWQAKHQQDLIAGIDEFLDELTVLPPGKWDLSDRIPPTRCLSSPNKRISMHLREWKSHCNGNTTAAKDRLSLAHLHTSEELERTGRLFGGLIRDIRRKAHWYRSDFSDAMHIQCLSAVLYIYLATVTNAITFGGMLGDATANMQGVLESFLGTAFTGSIFCLFSGQPLTILSSTGPVLVFERLLFSFSEDYGLDYLEFRLWIGLWVAFFGLVLVATEASHLVQYFTRFTEEGFCALISLIFIYDSLKKMLSLAEAFPINWHYRADDVTLYSCTCNLSVPGHVTAGNNTLYPPPTALQQVQTLLLGGDTEHQAAHTGPLAPVPHPWLISHLHPSHIPQPPAVWAALSRAQCLGRGGHLLGNSCPYVPDIALLSFLLFGGTFLCCTTLKHFKSSRYFPTGFRKLVSDFSIILAILIFCAIDAALGLETPKLLVPSELKPTNPMRGWIVFPFGANPWWICLAAVVPAILVTILIFMDQQITAVILNRKEYKLQKGAGFHLDFLCVSLLMIVTSVMGLPWYVSATVISLAHMESLRKESTASAPGEQPEFLGIREQRLTGLVVFILTGVSVFMAPILKYIPMPVLYGVFLHMGVAALNSIQFMDRVRLLLMPAKHQPDHLYLRHVPLRRVHLFTFIQLLCLAMLWVIKSTMAAIVFPVMLLALVGIRKALECIFSLHDLSWLDNIMPAAARKEADGKLHRKQEKQESNADEDVGDILGAVLFCSYPRGLCGAGAAPGQGMQLRQQCLPAQRCKNSQQPQHKVPNPDGMAPELRCFHLGSGCGSGDSSGAGRLGHGLRSARAVV
SIO_010081: LOC100549377
subclass of: SO_0000673
so part of: LOC100549377
location: join(479218..479480,480969..481129,481308..481451,481559..481620,481975..482132,483394..483481,483752..483906,484523..484639,484854..485028,485927..486060,486186..486457,488087..488442,488580..488693,489994..490155,490968..491146,491340..491412,493911..493979,494616..494789,494924..495358)
location: region:479218-495358:1
so has part: feature:479218-479480:1:exon
so has part: feature:480969-481129:1:exon
so has part: feature:481308-481451:1:exon
so has part: feature:481559-481620:1:exon
so has part: feature:481975-482132:1:exon
so has part: feature:483394-483481:1:exon
so has part: feature:483752-483906:1:exon
so has part: feature:484523-484639:1:exon
so has part: feature:484854-485028:1:exon
so has part: feature:485927-486060:1:exon
so has part: feature:486186-486457:1:exon
so has part: feature:488087-488442:1:exon
so has part: feature:488580-488693:1:exon
so has part: feature:489994-490155:1:exon
so has part: feature:490968-491146:1:exon
so has part: feature:491340-491412:1:exon
so has part: feature:493911-493979:1:exon
so has part: feature:494616-494789:1:exon
so has part: feature:494924-495358:1:exon

XP_019475821.1
type: Protein
SIO_000068: ncbiprotein

position:495358:1
position: 495358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479218-479480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480969-481129:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481308-481451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481559-481620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481975-482132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:483394-483481:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:483752-483906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:484523-484639:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:484854-485028:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:485927-486060:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:486186-486457:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488087-488442:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:488580-488693:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:489994-490155:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:490968-491146:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:491340-491412:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:493911-493979:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:494616-494789:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:494924-495358:1:exon

HBEGF
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HBEGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(501821..>505818)
location: region:501821-505818:-1
so has part: feature:501821-505818:-1:exon
subclass of: SO_0000010

100549227
type: Gene
SIO_000068: ncbigene

position:501821:-1
position: 501821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505818:-1
position: 505818
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:501821-505818:-1:exon

HBEGF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HBEGF
product: heparin binding EGF like growth factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_010718821.3
SIO_010081: HBEGF
subclass of: SO_0000673
so part of: HBEGF
location: complement(join(501821..502324,503279..503371,503481..503636,505640..>505818))
location: region:501821-505818:-1
so has part: feature:505640-505818:-1:exon
so has part: feature:503481-503636:-1:exon
so has part: feature:503279-503371:-1:exon
so has part: feature:501821-502324:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505640-505818:-1:exon

position:505640:-1
position: 505640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503481-503636:-1:exon

position:503481:-1
position: 503481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503636:-1
position: 503636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:503279-503371:-1:exon

position:503279:-1
position: 503279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503371:-1
position: 503371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:501821-502324:-1:exon

position:502324:-1
position: 502324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HBEGF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HBEGF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proheparin-binding EGF-like growth factor
translation: VAFLSKPQGPVTPKKKGNGNKRRKGKGLGKKRDPCLRKYKDFCIHGECKYIRELGAPSCICQPGYHGERCHGLLLPVEHPPSTYDHTTALAVVAVVLSSLCLVIITALLMFRCHKRGVYDVENEEKIKLGITVNH
SIO_010081: HBEGF
subclass of: SO_0000673
so part of: HBEGF
location: complement(join(503299..503371,503481..503636,505640..>505818))
location: region:503299-505818:-1
so has part: feature:505640-505818:-1:exon
so has part: feature:503481-503636:-1:exon
so has part: feature:503299-503371:-1:exon

XP_010717123.3
type: Protein
SIO_000068: ncbiprotein

position:503299:-1
position: 503299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505640-505818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:503481-503636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:503299-503371:-1:exon

PFDN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PFDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(514822..516440)
location: region:514822-516440:-1
so has part: feature:514822-516440:-1:exon
subclass of: SO_0000010

104913224
type: Gene
SIO_000068: ncbigene

position:514822:-1
position: 514822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:516440:-1
position: 516440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:514822-516440:-1:exon

PFDN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PFDN1
product: prefoldin subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010718825.3
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: complement(join(514822..515189,516298..516440))
location: region:514822-516440:-1
so has part: feature:516298-516440:-1:exon
so has part: feature:514822-515189:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516298-516440:-1:exon

position:516298:-1
position: 516298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:514822-515189:-1:exon

position:515189:-1
position: 515189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PFDN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PFDN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prefoldin subunit 1
translation: MAALVAQVSMSQRQQQQSAVQHAVRQALSPESSLRLSSTTYTAGTEEPVRLCPTGLSGRRSRLRPLPAPSSLSPRGLGWLGLAPPAPSAPGPAAAPRCAALPPQAFTELQAKVIDTQQKVKLADIQIEQLSKTKKHAHLTDTEIMTLVDETRMYEGVGRM
SIO_010081: PFDN1
subclass of: SO_0000673
so part of: PFDN1
location: complement(join(514850..515189,516298..516440))
location: region:514850-516440:-1
so has part: feature:516298-516440:-1:exon
so has part: feature:514850-515189:-1:exon

XP_010717127.1
type: Protein
SIO_000068: ncbiprotein

position:514850:-1
position: 514850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516298-516440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:514850-515189:-1:exon

LOC109369997
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 550981..561757
location: region:550981-561757:1
so has part: feature:550981-561757:1:exon
subclass of: SO_0000011

109369997
type: Gene
SIO_000068: ncbigene

position:550981:1
position: 550981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:561757:1
position: 561757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550981-561757:1:exon

LOC109369997
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369997
product: uncharacterized LOC109369997
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 188 samples with support for all annotated introns
transcript id: XR_002119739.2
SIO_010081: LOC109369997
subclass of: SO_0000673
so part of: LOC109369997
location: join(550981..553932,557505..561757)
location: region:550981-561757:1
so has part: feature:550981-553932:1:exon
so has part: feature:557505-561757:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550981-553932:1:exon

position:553932:1
position: 553932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557505-561757:1:exon

position:557505:1
position: 557505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913218
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913218
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 591095..597224
location: region:591095-597224:1
so has part: feature:591095-597224:1:exon
subclass of: SO_0000011

104913218
type: Gene
SIO_000068: ncbigene

position:591095:1
position: 591095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597224:1
position: 597224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:591095-597224:1:exon

LOC104913218
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913218
product: uncharacterized LOC104913218
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XR_795220.3
SIO_010081: LOC104913218
subclass of: SO_0000673
so part of: LOC104913218
location: join(591095..595279,595366..597224)
location: region:591095-597224:1
so has part: feature:591095-595279:1:exon
so has part: feature:595366-597224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:591095-595279:1:exon

position:595279:1
position: 595279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:595366-597224:1:exon

position:595366:1
position: 595366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109370000
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370000
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(611372..616168)
location: region:611372-616168:-1
so has part: feature:611372-616168:-1:exon
subclass of: SO_0000011

109370000
type: Gene
SIO_000068: ncbigene

position:611372:-1
position: 611372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616168:-1
position: 616168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:611372-616168:-1:exon

LOC109370000
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370000
product: uncharacterized LOC109370000
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161371.1
SIO_010081: LOC109370000
subclass of: SO_0000673
so part of: LOC109370000
location: complement(join(611372..613067,613482..613597,615848..616168))
location: region:611372-616168:-1
so has part: feature:615848-616168:-1:exon
so has part: feature:613482-613597:-1:exon
so has part: feature:611372-613067:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:615848-616168:-1:exon

position:615848:-1
position: 615848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:613482-613597:-1:exon

position:613482:-1
position: 613482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613597:-1
position: 613597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:611372-613067:-1:exon

position:613067:-1
position: 613067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913219
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(627745..644373)
location: region:627745-644373:-1
so has part: feature:627745-644373:-1:exon
subclass of: SO_0000011

104913219
type: Gene
SIO_000068: ncbigene

position:627745:-1
position: 627745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644373:-1
position: 644373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:627745-644373:-1:exon

LOC104913219
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913219
product: uncharacterized LOC104913219
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_795221.2
SIO_010081: LOC104913219
subclass of: SO_0000673
so part of: LOC104913219
location: complement(join(627745..628094,628892..629020,629114..644373))
location: region:627745-644373:-1
so has part: feature:629114-644373:-1:exon
so has part: feature:628892-629020:-1:exon
so has part: feature:627745-628094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629114-644373:-1:exon

position:629114:-1
position: 629114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:628892-629020:-1:exon

position:628892:-1
position: 628892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629020:-1
position: 629020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:627745-628094:-1:exon

position:628094:-1
position: 628094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913220
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913220
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(717856..732839)
location: region:717856-732839:-1
so has part: feature:717856-732839:-1:exon
subclass of: SO_0000011

104913220
type: Gene
SIO_000068: ncbigene

position:717856:-1
position: 717856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732839:-1
position: 732839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717856-732839:-1:exon

LOC104913220
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913220
product: uncharacterized LOC104913220, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004161366.1
SIO_010081: LOC104913220
subclass of: SO_0000673
so part of: LOC104913220
location: complement(join(717856..718032,721526..721644,732036..732839))
location: region:717856-732839:-1
so has part: feature:732036-732839:-1:exon
so has part: feature:721526-721644:-1:exon
so has part: feature:717856-718032:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:732036-732839:-1:exon

position:732036:-1
position: 732036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721526-721644:-1:exon

position:721526:-1
position: 721526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721644:-1
position: 721644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717856-718032:-1:exon

position:718032:-1
position: 718032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913220
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913220
product: uncharacterized LOC104913220, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_004161365.1
SIO_010081: LOC104913220
subclass of: SO_0000673
so part of: LOC104913220
location: complement(join(717860..718032,721526..721644,726464..726604))
location: region:717860-726604:-1
so has part: feature:726464-726604:-1:exon
so has part: feature:721526-721644:-1:exon
so has part: feature:717860-718032:-1:exon

position:717860:-1
position: 717860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726604:-1
position: 726604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726464-726604:-1:exon

position:726464:-1
position: 726464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721526-721644:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717860-718032:-1:exon

NRG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(735311..>771095)
location: region:735311-771095:-1
so has part: feature:735311-771095:-1:exon
subclass of: SO_0000010

100548763
type: Gene
SIO_000068: ncbigene

position:735311:-1
position: 735311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:771095:-1
position: 771095
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735311-771095:-1:exon

NRG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NRG2
product: neuregulin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019620294.1
SIO_010081: NRG2
subclass of: SO_0000673
so part of: NRG2
location: complement(join(735311..735347,737433..737795,738925..739149,741597..741724,743421..743544,744436..744538,748568..748591,760616..760674,770723..770843,771008..>771095))
location: region:735311-771095:-1
so has part: feature:771008-771095:-1:exon
so has part: feature:770723-770843:-1:exon
so has part: feature:760616-760674:-1:exon
so has part: feature:748568-748591:-1:exon
so has part: feature:744436-744538:-1:exon
so has part: feature:743421-743544:-1:exon
so has part: feature:741597-741724:-1:exon
so has part: feature:738925-739149:-1:exon
so has part: feature:737433-737795:-1:exon
so has part: feature:735311-735347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:771008-771095:-1:exon

position:771008:-1
position: 771008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:770723-770843:-1:exon

position:770723:-1
position: 770723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:770843:-1
position: 770843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:760616-760674:-1:exon

position:760616:-1
position: 760616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760674:-1
position: 760674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:748568-748591:-1:exon

position:748568:-1
position: 748568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748591:-1
position: 748591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:744436-744538:-1:exon

position:744436:-1
position: 744436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744538:-1
position: 744538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:743421-743544:-1:exon

position:743421:-1
position: 743421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743544:-1
position: 743544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:741597-741724:-1:exon

position:741597:-1
position: 741597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741724:-1
position: 741724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:738925-739149:-1:exon

position:738925:-1
position: 738925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739149:-1
position: 739149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:737433-737795:-1:exon

position:737433:-1
position: 737433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737795:-1
position: 737795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:735311-735347:-1:exon

position:735347:-1
position: 735347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NRG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pro-neuregulin-2, membrane-bound isoform
translation: GAGQVLSTPLTPPPLLGTVRSSCSPSTWKVTTTLSSWSGHARKCNETAKSYCVNGGVCYYIEGINQLSCKCPIEFTGDRCQHFAMVSFSKHLGFELKEAEELYQKRVLTITGICVALLVVGIVCVVAYCKTKKQRKQMHNHLRQNMCHAHQNRSLANGPSHPRLDPEEIQMADYISKNVSATEHVIRRETETTFSGSHSCSPSHHCSTATPTSSQRHESHTWSLERTESLTSDSQSGIMLSSVGTSKCNSPACVEARARRGAAFCIEDSRRPTTQYRDSVDSLRDSPHSERYVSALTTPARLSPVDFHYSMAAQVPTFEITSPNSAHAVSLPPAAPISFRVEEQQPLLRRYQLPFQDTQRYDSYYQRKTYLNDSMGSLPSSPFRITEDDEYETTQEYVTALEQPKKTASSNRVNLVPMTYMIA
SIO_010081: NRG2
subclass of: SO_0000673
so part of: NRG2
location: complement(join(735311..735347,737433..737795,738925..739149,741597..741724,743421..743544,744436..744538,748568..748591,760616..760674,770723..770843,771008..>771095))
location: region:735311-771095:-1
so has part: feature:771008-771095:-1:exon
so has part: feature:770723-770843:-1:exon
so has part: feature:760616-760674:-1:exon
so has part: feature:748568-748591:-1:exon
so has part: feature:744436-744538:-1:exon
so has part: feature:743421-743544:-1:exon
so has part: feature:741597-741724:-1:exon
so has part: feature:738925-739149:-1:exon
so has part: feature:737433-737795:-1:exon
so has part: feature:735311-735347:-1:exon

XP_019475839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:771008-771095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:770723-770843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760616-760674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:748568-748591:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:744436-744538:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:743421-743544:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:741597-741724:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:738925-739149:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:737433-737795:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:735311-735347:-1:exon

LOC100548610
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100548610
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 775743..789717
location: region:775743-789717:1
so has part: feature:775743-789717:1:exon
subclass of: SO_0000010

100548610
type: Gene
SIO_000068: ncbigene

position:775743:1
position: 775743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:789717:1
position: 789717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775743-789717:1:exon

LOC100548610
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100548610
product: PH and SEC7 domain-containing protein 2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_019620295.1
SIO_010081: LOC100548610
subclass of: SO_0000673
so part of: LOC100548610
location: join(775743..775959,777086..777156,784015..784172,785181..785325,786299..786441,787942..789717)
location: region:775743-789717:1
so has part: feature:775743-775959:1:exon
so has part: feature:777086-777156:1:exon
so has part: feature:784015-784172:1:exon
so has part: feature:785181-785325:1:exon
so has part: feature:786299-786441:1:exon
so has part: feature:787942-789717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:775743-775959:1:exon

position:775959:1
position: 775959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:777086-777156:1:exon

position:777086:1
position: 777086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:777156:1
position: 777156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:784015-784172:1:exon

position:784015:1
position: 784015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:784172:1
position: 784172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:785181-785325:1:exon

position:785181:1
position: 785181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785325:1
position: 785325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:786299-786441:1:exon

position:786299:1
position: 786299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786441:1
position: 786441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:787942-789717:1:exon

position:787942:1
position: 787942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100548610
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100548610
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: PH and SEC7 domain-containing protein 2-like
translation: MSSLNLFPSDEDELRKSLSELVDDKFGASAKKVTRIVDSSNPFLDIPQALNAITYKHGVLTRKTHADMDGKRTPRGRRGWKKFYAVLKGTILYLQKDEYKPDKDLSEVDLKNAIRVHHALATKASDYSKKSNVLKLKTADWRVFLFQAPSKEEMLSWILRINLVAAIFSAPAFPAAICSMKKFCRPLLPSSMTKLCQEEQLRSHENKXKQIADELAEHKSHPVEKSLKSKEAEEYRLKEHYLIFEKSRYETYINLLCMKIKVGTDDLERIETSFFKVEADDIALRKTHSSPSLSQGHMSVSCKVEKDIIEQNT
SIO_010081: LOC100548610
subclass of: SO_0000673
so part of: LOC100548610
location: join(775743..775959,777086..777156,784015..784172,785181..785325,786299..786441,787942..788148)
location: region:775743-788148:1
so has part: feature:775743-775959:1:exon
so has part: feature:777086-777156:1:exon
so has part: feature:784015-784172:1:exon
so has part: feature:785181-785325:1:exon
so has part: feature:786299-786441:1:exon
so has part: feature:787942-788148:1:exon

XP_019475840.1
type: Protein
SIO_000068: ncbiprotein

position:788148:1
position: 788148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775743-775959:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:777086-777156:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:784015-784172:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:785181-785325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786299-786441:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:787942-788148:1:exon

LOC104913221
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913221
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 801318..807156
location: region:801318-807156:1
so has part: feature:801318-807156:1:exon
subclass of: SO_0000011

104913221
type: Gene
SIO_000068: ncbigene

position:801318:1
position: 801318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807156:1
position: 807156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801318-807156:1:exon

LOC104913221
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913221
product: uncharacterized LOC104913221
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XR_795223.3
SIO_010081: LOC104913221
subclass of: SO_0000673
so part of: LOC104913221
location: join(801318..801948,802476..802588,805736..807156)
location: region:801318-807156:1
so has part: feature:801318-801948:1:exon
so has part: feature:802476-802588:1:exon
so has part: feature:805736-807156:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:801318-801948:1:exon

position:801948:1
position: 801948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802476-802588:1:exon

position:802476:1
position: 802476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802588:1
position: 802588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:805736-807156:1:exon

position:805736:1
position: 805736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913222
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 807393..818605
location: region:807393-818605:1
so has part: feature:807393-818605:1:exon
subclass of: SO_0000010

104913222
type: Gene
SIO_000068: ncbigene

position:807393:1
position: 807393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818605:1
position: 818605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807393-818605:1:exon

LOC104913222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913222
product: PH and SEC7 domain-containing protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010718822.3
SIO_010081: LOC104913222
subclass of: SO_0000673
so part of: LOC104913222
location: join(807393..807495,815409..815897,817354..818605)
location: region:807393-818605:1
so has part: feature:807393-807495:1:exon
so has part: feature:815409-815897:1:exon
so has part: feature:817354-818605:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807393-807495:1:exon

position:807495:1
position: 807495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:815409-815897:1:exon

position:815409:1
position: 815409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815897:1
position: 815897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:817354-818605:1:exon

position:817354:1
position: 817354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 2-like
translation: MKGTYYSSLDSLDVLSLTDETDSCVSFEAPLTPLIQQRVKESPELLEQKLVAQQRESLHHMAADKQEQAAAKPAEGDFGSPLRHSITSSRSENVLSRLSLKNIPNGFHVEGSEEDATKIINSISDASLKDALSDSDSDMGSTEQLDQGSTDTLANGCRADSEAAKRLAKRLYNLEGFKRCDVARQLGKK
SIO_010081: LOC104913222
subclass of: SO_0000673
so part of: LOC104913222
location: join(815527..815897,817354..817552)
location: region:815527-817552:1
so has part: feature:815527-815897:1:exon
so has part: feature:817354-817552:1:exon

XP_010717124.1
type: Protein
SIO_000068: ncbiprotein

position:815527:1
position: 815527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817552:1
position: 817552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:815527-815897:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:817354-817552:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 920024..920123
location: region:920024-920123:1
so has part: feature:920024-920123:1:region

position:920024:1
position: 920024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920123:1
position: 920123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920024-920123:1:region

LOC104913226
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 920130..921304
location: region:920130-921304:1
so has part: feature:920130-921304:1:exon
subclass of: SO_0000010

104913226
type: Gene
SIO_000068: ncbigene

position:920130:1
position: 920130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921304:1
position: 921304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920130-921304:1:exon

LOC104913226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913226
product: eukaryotic translation initiation factor 4E-binding protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 190 samples with support for all annotated introns
transcript id: XM_010718830.2
SIO_010081: LOC104913226
subclass of: SO_0000673
so part of: LOC104913226
location: join(920130..920902,921080..921304)
location: region:920130-921304:1
so has part: feature:920130-920902:1:exon
so has part: feature:921080-921304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:920130-920902:1:exon

position:920902:1
position: 920902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:921080-921304:1:exon

position:921080:1
position: 921080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913226
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913226
product: eukaryotic translation initiation factor 4E-binding protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010718829.3
SIO_010081: LOC104913226
subclass of: SO_0000673
so part of: LOC104913226
location: join(920147..920889,921080..921304)
location: region:920147-921304:1
so has part: feature:920147-920889:1:exon
so has part: feature:921080-921304:1:exon

position:920147:1
position: 920147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920147-920889:1:exon

position:920889:1
position: 920889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:921080-921304:1:exon

LOC104913226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4E-binding protein 3 isoform X1
translation: MGFSLVPAGNFTTVPNSAVALSIAECHSLRWARDRTVVHRKGGCQGTAVPDSPLLLAGTHIIYGRKFLLECKNSPGARTLPCCLPQIPGVTSLAQSSLVKLEEHKEQNESEEAMPDQDQFEMDN
SIO_010081: LOC104913226
subclass of: SO_0000673
so part of: LOC104913226
location: join(920544..920889,921080..921108)
location: region:920544-921108:1
so has part: feature:920544-920889:1:exon
so has part: feature:921080-921108:1:exon

XP_010717131.1
type: Protein
SIO_000068: ncbiprotein

position:920544:1
position: 920544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921108:1
position: 921108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920544-920889:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:921080-921108:1:exon

LOC104913226
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913226
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 4E-binding protein 3 isoform X2
translation: MGFSLVPAGNFTTVPNSAVALSIAECHSLRWARDRTVVHRKGGCQGTAVPDSPLLLAGTHIIYGRKFLLECKNSPGARTLPCCLPQIPGVTSLAQSSLVKLEEHKEQNESEEAMPGEQTRSRPV
SIO_010081: LOC104913226
subclass of: SO_0000673
so part of: LOC104913226
location: join(920544..920902,921080..921095)
location: region:920544-921095:1
so has part: feature:920544-920902:1:exon
so has part: feature:921080-921095:1:exon

XP_010717132.1
type: Protein
SIO_000068: ncbiprotein

position:921095:1
position: 921095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:920544-920902:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:921080-921095:1:exon

SRA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SRA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(921934..>922498)
location: region:921934-922498:-1
so has part: feature:921934-922498:-1:exon
subclass of: SO_0000010

104913228
type: Gene
SIO_000068: ncbigene

position:921934:-1
position: 921934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922498:-1
position: 922498
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:921934-922498:-1:exon

SRA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SRA1
product: steroid receptor RNA activator 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010718833.2
SIO_010081: SRA1
subclass of: SO_0000673
so part of: SRA1
location: complement(join(921934..922271,922346..>922498))
location: region:921934-922498:-1
so has part: feature:922346-922498:-1:exon
so has part: feature:921934-922271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922346-922498:-1:exon

position:922346:-1
position: 922346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:921934-922271:-1:exon

position:922271:-1
position: 922271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SRA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SRA1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: steroid receptor RNA activator 1
translation: PSAGGAPPSAYRCFQKQVCDDIGRRLTVRGDAWAXGKLSAPVRRRMALLVRELERRRWDAADEIHRSLMVDHVNEVSLWLVGVKRLIAECRNLPAAEPGEDGNAAGSGQEVPAPPGAAD
SIO_010081: SRA1
subclass of: SO_0000673
so part of: SRA1
location: complement(join(922066..922271,922346..>922498))
location: region:922066-922498:-1
so has part: feature:922346-922498:-1:exon
so has part: feature:922066-922271:-1:exon

XP_010717135.2
type: Protein
SIO_000068: ncbiprotein

position:922066:-1
position: 922066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922346-922498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:922066-922271:-1:exon

LOC104913227
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913227
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 922613..938953
location: region:922613-938953:1
so has part: feature:922613-938953:1:exon
subclass of: SO_0000010

104913227
type: Gene
SIO_000068: ncbigene

position:922613:1
position: 922613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938953:1
position: 938953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922613-938953:1:exon

LOC104913227
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913227
product: ankyrin repeat and KH domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 217 samples with support for all annotated introns
transcript id: XM_019620283.2
SIO_010081: LOC104913227
subclass of: SO_0000673
so part of: LOC104913227
location: join(922613..922687,924341..924487,925929..926039,927451..927600,927893..929502,934831..935082,935644..935819,936598..936762,937224..938953)
location: region:922613-938953:1
so has part: feature:922613-922687:1:exon
so has part: feature:924341-924487:1:exon
so has part: feature:925929-926039:1:exon
so has part: feature:927451-927600:1:exon
so has part: feature:927893-929502:1:exon
so has part: feature:934831-935082:1:exon
so has part: feature:935644-935819:1:exon
so has part: feature:936598-936762:1:exon
so has part: feature:937224-938953:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922613-922687:1:exon

position:922687:1
position: 922687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:924341-924487:1:exon

position:924341:1
position: 924341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:924487:1
position: 924487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:925929-926039:1:exon

position:925929:1
position: 925929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:926039:1
position: 926039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:927451-927600:1:exon

position:927451:1
position: 927451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927600:1
position: 927600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:927893-929502:1:exon

position:927893:1
position: 927893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929502:1
position: 929502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:934831-935082:1:exon

position:934831:1
position: 934831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935082:1
position: 935082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:935644-935819:1:exon

position:935644:1
position: 935644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935819:1
position: 935819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:936598-936762:1:exon

position:936598:1
position: 936598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936762:1
position: 936762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:937224-938953:1:exon

position:937224:1
position: 937224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913227
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913227
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1-like
translation: MGRGGCNITAIQDVTGAHIDVDKQKDKNGERMITIRGGMESTRYAVQLINALIQDPAKELEDLIPKTHIRTPASSNKSIHANFSSGVSTASASNKNSFPLGAPPLVTSQSSTLSTFQPTNKLNKNVPANVRSSFPVSLPLAYSHPHFALLAAQTMQQIRHPRLPMAQFGGTFSPSPNTWGPFPVRPVNPGSTNSSPKHNSSSRVGSQNGNILQTESPGLATSSCPITVSSVVASTQPLCATSNRTPSSVRKQLFACVPKTSAAATAISTVTNTCSTLPSVSSAPPNNGQVSAAFLPSTAPQMQHSALKADSFSAVSAPKEQVSTPDQPVGNTCTPSSVAGSSSMSTSSNSGVPEAHPSSSPAPLTNTQDEILTASMSEMSPSMPISSSSETAPLSLASPRSVVADNQDNSNLPQVAVPAPRVTHRMQSRGSFYSVVPNANLHQDPQSIFVTNQVPLTPSQGPPAAVQLSSAMNVMNGSQMHINPANKSLPPTFGPATLFNHFSSLFDSNQVPSNQGWGDCPLSTRAAADPSFTVQSTFLNNSVLGHVENVHPDNSKAPGFRPPSQRVSTSPVGESPIPSVSSGSSSPLSAASAPSNLSQPKTGNTNQDRKVPPPIGTERLARIRQGGSVTPTPLGTNFTAPVGHSGIWSFGVNSVSEGLSGWSQPVMGNHPMHQQLSDPGTFSQNQPMERDDSGIVAPSNIFHQPMPNSFVDFSKGLPISMYGGTLIPSHPQLADGPGGPLFNGLHTPDPAWNPMIKVVQNSTECTDAQQIWPGTWAPHIGNMHLKYVN
SIO_010081: LOC104913227
subclass of: SO_0000673
so part of: LOC104913227
location: join(927494..927600,927893..929502,934831..935082,935644..935819,936598..936762,937224..937283)
location: region:927494-937283:1
so has part: feature:927494-927600:1:exon
so has part: feature:927893-929502:1:exon
so has part: feature:934831-935082:1:exon
so has part: feature:935644-935819:1:exon
so has part: feature:936598-936762:1:exon
so has part: feature:937224-937283:1:exon

XP_019475828.1
type: Protein
SIO_000068: ncbiprotein

position:927494:1
position: 927494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937283:1
position: 937283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927494-927600:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927893-929502:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:934831-935082:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935644-935819:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:936598-936762:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:937224-937283:1:exon

LOC100549531
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100549531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 946605..954994
location: region:946605-954994:1
so has part: feature:946605-954994:1:exon
subclass of: SO_0000010

100549531
type: Gene
SIO_000068: ncbigene

position:946605:1
position: 946605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954994:1
position: 954994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946605-954994:1:exon

LOC100549531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100549531
product: ankyrin repeat and KH domain-containing protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 215 samples with support for all annotated introns
transcript id: XM_019620296.2
SIO_010081: LOC100549531
subclass of: SO_0000673
so part of: LOC100549531
location: join(946605..946767,946907..947018,947961..948106,948301..948443,949259..949472,950733..950908,951567..951729,952517..952612,952868..952984,954006..954179,954516..954994)
location: region:946605-954994:1
so has part: feature:946605-946767:1:exon
so has part: feature:946907-947018:1:exon
so has part: feature:947961-948106:1:exon
so has part: feature:948301-948443:1:exon
so has part: feature:949259-949472:1:exon
so has part: feature:950733-950908:1:exon
so has part: feature:951567-951729:1:exon
so has part: feature:952517-952612:1:exon
so has part: feature:952868-952984:1:exon
so has part: feature:954006-954179:1:exon
so has part: feature:954516-954994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946605-946767:1:exon

position:946767:1
position: 946767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:946907-947018:1:exon

position:946907:1
position: 946907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947018:1
position: 947018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:947961-948106:1:exon

position:947961:1
position: 947961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948106:1
position: 948106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:948301-948443:1:exon

position:948301:1
position: 948301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948443:1
position: 948443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:949259-949472:1:exon

position:949259:1
position: 949259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949472:1
position: 949472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:950733-950908:1:exon

position:950733:1
position: 950733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950908:1
position: 950908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:951567-951729:1:exon

position:951567:1
position: 951567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951729:1
position: 951729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:952517-952612:1:exon

position:952517:1
position: 952517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952612:1
position: 952612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:952868-952984:1:exon

position:952868:1
position: 952868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952984:1
position: 952984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:954006-954179:1:exon

position:954006:1
position: 954006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954179:1
position: 954179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:954516-954994:1:exon

position:954516:1
position: 954516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100549531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100549531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and KH domain-containing protein 1
translation: MYPSVDIDAHTESNHDTALTLACAGGHEELVSVLIARGANIEHRDKKGFTPLILAATAGHIGVVEILLDKGGDIEAQSERTKDTPLSLACSGGRQEVVDLLLARGANKEHRNVSDYTPLSLAASGGYVNIIKILLNAGAEINSRTGSKLGISPLMLAAMNGHVPAVKLLLDMGSDINAQIETNRNTALTLACFQGRAEVVSLLLDRKANVEHRAKTGLTPLMEAASGGYAEVGRVLLDKGADVNAPPVPSSRDTALTIAADKGHYKFCELLINRGAHIDVRNKKGNTPLWLAANGGHYDVVQLLVQAGADVDAADNRKITPLMSAFRKGHVKVVQFLVKEVNQFPSDIECMRYIATITDKDLLKKCHQCVETIVKAKDQQAAEANKNATILLKELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKENKKKMKKISLKKL
SIO_010081: LOC100549531
subclass of: SO_0000673
so part of: LOC100549531
location: join(946738..946767,946907..947018,947961..948106,948301..948443,949259..949472,950733..950908,951567..951729,952517..952612,952868..952984,954006..954137)
location: region:946738-954137:1
so has part: feature:946738-946767:1:exon
so has part: feature:946907-947018:1:exon
so has part: feature:947961-948106:1:exon
so has part: feature:948301-948443:1:exon
so has part: feature:949259-949472:1:exon
so has part: feature:950733-950908:1:exon
so has part: feature:951567-951729:1:exon
so has part: feature:952517-952612:1:exon
so has part: feature:952868-952984:1:exon
so has part: feature:954006-954137:1:exon

XP_019475841.2
type: Protein
SIO_000068: ncbiprotein

position:946738:1
position: 946738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954137:1
position: 954137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946738-946767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946907-947018:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:947961-948106:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:948301-948443:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:949259-949472:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:950733-950908:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:951567-951729:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:952517-952612:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952868-952984:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:954006-954137:1:exon

LOC109370010
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 954150..999286
location: region:954150-999286:1
so has part: feature:954150-999286:1:exon
subclass of: SO_0000010

109370010
type: Gene
SIO_000068: ncbigene

position:954150:1
position: 954150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999286:1
position: 999286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954150-999286:1:exon

LOC109370010
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109370010
product: protocadherin gamma-A8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019620297.2
SIO_010081: LOC109370010
subclass of: SO_0000673
so part of: LOC109370010
location: join(954150..954179,958400..958459,962849..962936,965090..965217,965385..965528,966129..966231,998253..999286)
location: region:954150-999286:1
so has part: feature:954150-954179:1:exon
so has part: feature:958400-958459:1:exon
so has part: feature:962849-962936:1:exon
so has part: feature:965090-965217:1:exon
so has part: feature:965385-965528:1:exon
so has part: feature:966129-966231:1:exon
so has part: feature:998253-999286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:954150-954179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958400-958459:1:exon

position:958400:1
position: 958400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958459:1
position: 958459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:962849-962936:1:exon

position:962849:1
position: 962849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962936:1
position: 962936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:965090-965217:1:exon

position:965090:1
position: 965090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965217:1
position: 965217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:965385-965528:1:exon

position:965385:1
position: 965385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965528:1
position: 965528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:966129-966231:1:exon

position:966129:1
position: 966129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966231:1
position: 966231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:998253-999286:1:exon

position:998253:1
position: 998253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109370010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109370010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-A8-like
translation: MMMRKKMMMKDKQEDLKKTVLEGIETGKHQDDYIRDYILPWFFIKYELLVAIVPFSMHFCANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLPVPSADLSQLTPPSQDQTQVPRVPVHTLAMVVPPQEPDRTPQENSPPLVGVVKGGGAARAVRSVRLAGGGGEGAREVAEEKSEVGAAIVRWRRCCGGGGAVREMCAAREGRCGRRQRALLCCVLVAVWEAAWGQLRYSVPEELPKGSFVGDVAEDLALELAALGGRGARVVSQGRTQYFALHASSGHLVTAERIDREQLCESEPQCVLRCELIVEGEMKVYAIEVEITDVNDNAPSFKNLDIEEEISEITVPGTRFPLPEAHDLDVGMNSLQSYALSGDEHFSLSVQAGADGEKRPELVLAKALDREEAAFHELLLRASDGGEPARTGTARIRVAVLDANDNAPAFSQAVYTVRVPEDVPVGSTLLSVTATDPDEGTNGEVKYNLRKMTKKASKYSN
SIO_010081: LOC109370010
subclass of: SO_0000673
so part of: LOC109370010
location: join(954150..954179,958400..958459,962849..962936,965090..965217,965385..965528,966129..966231,998253..999286)
location: region:954150-999286:1
so has part: feature:954150-954179:1:exon
so has part: feature:958400-958459:1:exon
so has part: feature:962849-962936:1:exon
so has part: feature:965090-965217:1:exon
so has part: feature:965385-965528:1:exon
so has part: feature:966129-966231:1:exon
so has part: feature:998253-999286:1:exon

XP_019475842.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:954150-954179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958400-958459:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:962849-962936:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:965090-965217:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:965385-965528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:966129-966231:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:998253-999286:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 976709..976808
location: region:976709-976808:1
so has part: feature:976709-976808:1:region

position:976709:1
position: 976709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976808:1
position: 976808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976709-976808:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 999352..999451
location: region:999352-999451:1
so has part: feature:999352-999451:1:region

position:999352:1
position: 999352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999451:1
position: 999451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:999352-999451:1:region

LOC100540301
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100540301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1011255..1014882)
location: region:1011255-1014882:-1
so has part: feature:1011255-1014882:-1:exon
subclass of: SO_0000010

100540301
type: Gene
SIO_000068: ncbigene

position:1011255:-1
position: 1011255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014882:-1
position: 1014882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1011255-1014882:-1:exon

LOC100540301
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100540301
product: protocadherin gamma-B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555646.1
SIO_010081: LOC100540301
subclass of: SO_0000673
so part of: LOC100540301
location: complement(join(1011255..1011278,1011687..1011869,1012773..1014882))
location: region:1011255-1014882:-1
so has part: feature:1012773-1014882:-1:exon
so has part: feature:1011687-1011869:-1:exon
so has part: feature:1011255-1011278:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1012773-1014882:-1:exon

position:1012773:-1
position: 1012773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1011687-1011869:-1:exon

position:1011687:-1
position: 1011687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011869:-1
position: 1011869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1011255-1011278:-1:exon

position:1011278:-1
position: 1011278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100540301
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100540301
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-B1-like
translation: MEVREAVRGREAAGRVALLTVLLLLCCRAVSERLRYAIPEELGRGSLVGPLARDLGLNPTELLVRQLRIVSGDEKRYFVLEEESGNLRVNERIDREDICGDVTPCVFGLETVVENPFNIYHVSITIQDINDNVPRFDKEFVAIEMIESAPPGTRFPLGTGRDPDIGVNSLQNYQLTPNPLFSLVVKEISDGRKHVELLLEKNLDREKQKSHNLILTAVDGGDPVRSGTAQIKVDVTDANDNAPVFDKEIYKVRVPENLPEGSLAFQVKATDGDEGTNAEITYSFNDIASSAHQLFSLDPKTGDVKITGPLDYEDMKYYEVTVEGKDGGGLSTHTKVHIEVIDVNDNAPSLTLLPILNPVPEDSVPSTVVAVINVRDRDSGENGEVTCNLGGDLPFKLEASSESTYKLVIQNSLDREEVSAYNITIIATDGGSPALSSRADLVLEVSDVNDNAPVFEEAAYSAYVPENNAAGEPVLRVSGTLPYSYNLCVAPGRAVAEGAWLLPPALLPSVPADEPLGGEPCGKRSPSTGEPPDDLPGPQMIVQNHF
SIO_010081: LOC100540301
subclass of: SO_0000673
so part of: LOC100540301
location: complement(join(1011255..1011278,1011687..1011869,1012773..1014206))
location: region:1011255-1014206:-1
so has part: feature:1012773-1014206:-1:exon
so has part: feature:1011687-1011869:-1:exon
so has part: feature:1011255-1011278:-1:exon

XP_031411506.1
type: Protein
SIO_000068: ncbiprotein

position:1014206:-1
position: 1014206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012773-1014206:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1011687-1011869:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011255-1011278:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1016755..1016854
location: region:1016755-1016854:1
so has part: feature:1016755-1016854:1:region

position:1016755:1
position: 1016755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016854:1
position: 1016854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016755-1016854:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1025879..1025978
location: region:1025879-1025978:1
so has part: feature:1025879-1025978:1:region

position:1025879:1
position: 1025879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025978:1
position: 1025978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025879-1025978:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1026669..1026768
location: region:1026669-1026768:1
so has part: feature:1026669-1026768:1:region

position:1026669:1
position: 1026669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026768:1
position: 1026768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026669-1026768:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1038076..1038175
location: region:1038076-1038175:1
so has part: feature:1038076-1038175:1:region

position:1038076:1
position: 1038076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038175:1
position: 1038175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1038076-1038175:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1040779..1040878
location: region:1040779-1040878:1
so has part: feature:1040779-1040878:1:region

position:1040779:1
position: 1040779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040878:1
position: 1040878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1040779-1040878:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1041613..1041712
location: region:1041613-1041712:1
so has part: feature:1041613-1041712:1:region

position:1041613:1
position: 1041613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041712:1
position: 1041712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041613-1041712:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1068945..1069044
location: region:1068945-1069044:1
so has part: feature:1068945-1069044:1:region

position:1068945:1
position: 1068945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1069044:1
position: 1069044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1068945-1069044:1:region

LOC100544252
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1071458..1100125
location: region:1071458-1100125:1
so has part: feature:1071458-1100125:1:exon
subclass of: SO_0000010

100544252
type: Gene
SIO_000068: ncbigene

position:1071458:1
position: 1071458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100125:1
position: 1100125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071458-1100125:1:exon

LOC100544252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544252
product: protocadherin gamma-C3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 175 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_019620282.2
SIO_010081: LOC100544252
subclass of: SO_0000673
so part of: LOC100544252
location: join(1071458..1074210,1086902..1086960,1094419..1094507,1099463..1100125)
location: region:1071458-1100125:1
so has part: feature:1071458-1074210:1:exon
so has part: feature:1086902-1086960:1:exon
so has part: feature:1094419-1094507:1:exon
so has part: feature:1099463-1100125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1071458-1074210:1:exon

position:1074210:1
position: 1074210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1086902-1086960:1:exon

position:1086902:1
position: 1086902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086960:1
position: 1086960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1094419-1094507:1:exon

position:1094419:1
position: 1094419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1094507:1
position: 1094507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1099463-1100125:1:exon

position:1099463:1
position: 1099463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100544252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-C3 isoform X2
translation: MKGVAARSRGVTPGQLLSLCLLLAASSGASAAIRYAIPEEARRGSAVGNVAADLALDPARLSGRRPRVVSGGSKKYFAVDAASGSLLVSERIDREELCGALSPCTLSFEIVLEKPLELYSGAVEIQDINDNDPVFPSSQARLEISESVAAGTRFPLESAQDPDVGINSLQTYQLSANPHFVLDVQTRVDGSKYAELVLEKELDREEQRELHLVLTALDGGSPPRSAHVQIHIDVVDSNDNAPVFNQSTYKASVRENTPSGTLVTKVSAYDLDDGPNGDIVYSFSSHTPAKVRELFVLDSDIGELRVKGQLDYEETKLYEIYLQAKDKGAVPGVANCKVLVEVVDVNDNAPEVTVTSVYSPVPEDAAPGTVVALLSVTDLDSGDNGLVNCFIPPGIPFTLSSSLKNYYTLKTKAALDREEASEYNITVTARDSGSPPLSAVKHILVQVSDVNDNAPKSSQDSYDVYVPENNVPGISILNVSATDPDLGRNGHLSYSLLQGDTTVGHLFSINRESGALHLLTSLDHEDQMEFSMMVQVHDGGSPPLATNLSVNVFVTDLNDNAPTVLYPLPNSTSSYTDVVAPGTPVGHVVTKVVAVDADAGYNAWISYTLLQATDPTLFSVGLHSGEIITARQLREDEAPQHTLVILLKDHGEPALSASATVSISVAERVKEALTDLTDVTPPHDSRRHMTFYLILAVILVSAAFFITIVSVGIFKCYKWRQSKELFNSSRSTLYRTPGPFHHVDAVRGGFTPPNFYHQVYLTTDSRQSDLLCKKPITSSPLGSRQNTMRNGEPGLYHQMVGTASRLPTPAEQAQPNPDWRFSQTQRPGTSGSQNGEEGGAWPNNQFDTEMLQAMILASANEAADVNATLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIPGSTATLSNAAGKRDAKPSGGNKKKSGKKEKK
SIO_010081: LOC100544252
subclass of: SO_0000673
so part of: LOC100544252
location: join(1071778..1074210,1086902..1086960,1094419..1094507,1099463..1099680)
location: region:1071778-1099680:1
so has part: feature:1071778-1074210:1:exon
so has part: feature:1086902-1086960:1:exon
so has part: feature:1094419-1094507:1:exon
so has part: feature:1099463-1099680:1:exon

XP_019475827.1
type: Protein
SIO_000068: ncbiprotein

position:1071778:1
position: 1071778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099680:1
position: 1099680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1071778-1074210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086902-1086960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1094419-1094507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1099463-1099680:1:exon

LOC109370005
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1077432..>1079849
location: region:1077432-1079849:1
so has part: feature:1077432-1079849:1:exon
subclass of: SO_0000010

109370005
type: Gene
SIO_000068: ncbigene

position:1077432:1
position: 1077432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079849:1
position: 1079849
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077432-1079849:1:exon

LOC109370005
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109370005
product: protocadherin gamma-C5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019620291.1
SIO_010081: LOC109370005
subclass of: SO_0000673
so part of: LOC109370005
location: 1077432..>1079849
location: region:1077432-1079849:1
so has part: feature:1077432-1079849:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1077432-1079849:1:exon

LOC109370005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109370005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-C5-like
translation: MESVSLQRPAWKWQVLSLFSLCGWGWVSGQIRYSVLEESEVGTAVGNVAQDLGLKVEQLAGRRLRLGSEESRQHFAVRLDSGVLVVSERLDRERLCGAASSCVLSVQVVAENPLQLFRLEVEILDLNDNSPSFPTARRSLRIAESAAVATRFPLESAQDPDVGTNAVGSYRLNPNSHFSLDVKQLQDGKLFPELVLERALDREERPELQLVLTAVDGGSPARSGTAQITVQVLDINDNAPAFDRATYKVQIPENTPVGALLLQLNASDPDEGPNGETQYSFGVHTSEAVRRLFALDPHSGEVRVSGELDFEESPFYEIHVRARDRGVPEMEGHCVLQVEVEDANDNPPEVLLTSLLNPVPEDTPPETVVGLFNVRDRDSGANGDVSLEISPSVPFAVRSLQNHFSLVTRQSLDRETTSQYVVQLIAQDGGSPALTTSLTLLLNVSDVNDNPPRFLQPSYDAFVPENSPPGSLLCTVSASDPDDGDNSLLVYSIEGHVQGAPASSYVHINPNDGNLYAQRTFDFELLQVLPISVAVRDSGSLPLHANVTVYIFVLDQNDHSPTILHPAGNGDVPTPERVPLSAPPGYLVTKVTAVDADAGYNAWLSYRLLPESTEPSLFHVSQYTGEVRTARVLRDTDVAVQQLLILVADNGDPPLSTTVTISVALEEEALEESYKPRDFLAGAKEKPDLTLYLIIALAAVSTVALATVTLLAAWCLRRRGRAAASPRCCWAAESPSRDFFNHSSPKLQLCSDGTLKYMEVTLRPSDAQSQCYSTCFSPDSDRSDFTFLRPCPPPGILPREPGAFLS
SIO_010081: LOC109370005
subclass of: SO_0000673
so part of: LOC109370005
location: 1077432..>1079849
location: region:1077432-1079849:1
so has part: feature:1077432-1079849:1:exon

XP_019475836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1077432-1079849:1:exon

LOC100544252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544252
product: protocadherin gamma-C3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 120 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_019620280.2
SIO_010081: LOC100544252
subclass of: SO_0000673
so part of: LOC100544252
location: join(1079957..1082475,1086902..1086960,1094419..1094507,1099463..1100125)
location: region:1079957-1100125:1
so has part: feature:1079957-1082475:1:exon
so has part: feature:1086902-1086960:1:exon
so has part: feature:1094419-1094507:1:exon
so has part: feature:1099463-1100125:1:exon

position:1079957:1
position: 1079957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079957-1082475:1:exon

position:1082475:1
position: 1082475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1086902-1086960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1094419-1094507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1099463-1100125:1:exon

LOC100544252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin gamma-C5 isoform X1
translation: MGAVSAERGPAARAASSEGIAPRAPARMLRAGKAGWSLGLPRVFSFCLFLHSSSAQIRYSIPEELTRGAFVGNIAKDLGTDVGKLAAANLQVLSDSDSQYFSVNVNTGVIMVSERIDREQLCGQNPRCFLHLKLAIENPVEFYRIEVEILDINDNSPEFPSDEVSLRIYELASLGARFPIQPAQDPDVGTNTLQTYHLSANENFNLNVKARTDGGKFPELVLERALDREHRAFHHLVLTAEDGGSPPKSSKTHITIQVLDANDNHPVFDRPSYGARLVENSPLGTLVVKLNATDVDEGPNGDIRYSLSSHNSDALRQIFAIDEQTGEIRVQGNLDFEEATVYEIEVEAKDMGSPTMEEHCSVVVEVTDVNDNAPEVILTSFSSSLSEDALPGTVVAVIHVKDRDSGDQGKVQCHVSPDLPFQLRKDYEHQYSLLTRTRLDREHVAYYNVTISASDLGSPPLSRHTILPITLVDVNDNAPQFEQASYEVLVAENNPVGSVLVTVSAVDPDSEQNSRLSYSILQAGGTEPGLDPTRYLSIHPTSGQISAKLPFDYEQTTYLQFHVEVSDGGSPALRNRTLVHVFIADQNDNAPRVHFPRAGEDSATQLRISPSTAPLALITKVVAIDADSGRNAWLSYHLMEATEPGLFSVALRSGEIRTTRALQETDASAHELVVVVRDAGEPPLSTAVTLVVLVEERGPEALLGSEAQAADGGGLPTITIYLIASLVLISSVSLVGLAVLGVRCVRRGSAPAVQGCSVKSMDTLQPPPSHIFGHLHYEPKQGDTVMGVQVTATAPPAPRYRSCFSPVSDISEFMFVKPSVGTAGAKPSAPSEQAQPNPDWRFSQTQRPGTSGSQNGEEGGAWPNNQFDTEMLQAMILASANEAADVNATLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIPGSTATLSNAAGKRDAKPSGGNKKKSGKKEKK
SIO_010081: LOC100544252
subclass of: SO_0000673
so part of: LOC100544252
location: join(1079980..1082475,1086902..1086960,1094419..1094507,1099463..1099680)
location: region:1079980-1099680:1
so has part: feature:1079980-1082475:1:exon
so has part: feature:1086902-1086960:1:exon
so has part: feature:1094419-1094507:1:exon
so has part: feature:1099463-1099680:1:exon

XP_019475825.1
type: Protein
SIO_000068: ncbiprotein

position:1079980:1
position: 1079980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079980-1082475:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1086902-1086960:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1094419-1094507:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1099463-1099680:1:exon

LOC104913231
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1102704..1121789)
location: region:1102704-1121789:-1
so has part: feature:1102704-1121789:-1:exon
subclass of: SO_0000011

104913231
type: Gene
SIO_000068: ncbigene

position:1102704:-1
position: 1102704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121789:-1
position: 1121789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1102704-1121789:-1:exon

LOC104913231
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913231
product: uncharacterized LOC104913231, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004161368.1
SIO_010081: LOC104913231
subclass of: SO_0000673
so part of: LOC104913231
location: complement(join(1102704..1116843,1118548..1118701,1118911..1119027,1121578..1121789))
location: region:1102704-1121789:-1
so has part: feature:1121578-1121789:-1:exon
so has part: feature:1118911-1119027:-1:exon
so has part: feature:1118548-1118701:-1:exon
so has part: feature:1102704-1116843:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1121578-1121789:-1:exon

position:1121578:-1
position: 1121578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1118911-1119027:-1:exon

position:1118911:-1
position: 1118911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119027:-1
position: 1119027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1118548-1118701:-1:exon

position:1118548:-1
position: 1118548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1118701:-1
position: 1118701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1102704-1116843:-1:exon

position:1116843:-1
position: 1116843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913231
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913231
product: uncharacterized LOC104913231, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004161367.1
SIO_010081: LOC104913231
subclass of: SO_0000673
so part of: LOC104913231
location: complement(join(1102704..1118701,1118911..1119027,1121578..1121786))
location: region:1102704-1121786:-1
so has part: feature:1121578-1121786:-1:exon
so has part: feature:1118911-1119027:-1:exon
so has part: feature:1102704-1118701:-1:exon

position:1121786:-1
position: 1121786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1121578-1121786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1118911-1119027:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1102704-1118701:-1:exon

HDAC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1129486..1143585)
location: region:1129486-1143585:-1
so has part: feature:1129486-1143585:-1:exon
subclass of: SO_0000010

100541774
type: Gene
SIO_000068: ncbigene

position:1129486:-1
position: 1129486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143585:-1
position: 1143585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1129486-1143585:-1:exon

HDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HDAC3
product: histone deacetylase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_003209968.4
SIO_010081: HDAC3
subclass of: SO_0000673
so part of: HDAC3
location: complement(join(1129486..1130702,1130885..1131042,1131460..1131539,1131940..1131998,1132129..1132218,1132543..1132607,1132847..1132920,1133012..1133092,1133356..1133489,1135668..1135723,1135811..1135867,1137023..1137104,1138326..1138468,1143207..1143289,1143445..1143585))
location: region:1129486-1143585:-1
so has part: feature:1143445-1143585:-1:exon
so has part: feature:1143207-1143289:-1:exon
so has part: feature:1138326-1138468:-1:exon
so has part: feature:1137023-1137104:-1:exon
so has part: feature:1135811-1135867:-1:exon
so has part: feature:1135668-1135723:-1:exon
so has part: feature:1133356-1133489:-1:exon
so has part: feature:1133012-1133092:-1:exon
so has part: feature:1132847-1132920:-1:exon
so has part: feature:1132543-1132607:-1:exon
so has part: feature:1132129-1132218:-1:exon
so has part: feature:1131940-1131998:-1:exon
so has part: feature:1131460-1131539:-1:exon
so has part: feature:1130885-1131042:-1:exon
so has part: feature:1129486-1130702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1143445-1143585:-1:exon

position:1143445:-1
position: 1143445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1143207-1143289:-1:exon

position:1143207:-1
position: 1143207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143289:-1
position: 1143289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1138326-1138468:-1:exon

position:1138326:-1
position: 1138326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1138468:-1
position: 1138468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1137023-1137104:-1:exon

position:1137023:-1
position: 1137023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1137104:-1
position: 1137104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1135811-1135867:-1:exon

position:1135811:-1
position: 1135811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135867:-1
position: 1135867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1135668-1135723:-1:exon

position:1135668:-1
position: 1135668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135723:-1
position: 1135723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1133356-1133489:-1:exon

position:1133356:-1
position: 1133356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133489:-1
position: 1133489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1133012-1133092:-1:exon

position:1133012:-1
position: 1133012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1133092:-1
position: 1133092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1132847-1132920:-1:exon

position:1132847:-1
position: 1132847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132920:-1
position: 1132920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1132543-1132607:-1:exon

position:1132543:-1
position: 1132543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132607:-1
position: 1132607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1132129-1132218:-1:exon

position:1132129:-1
position: 1132129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1132218:-1
position: 1132218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1131940-1131998:-1:exon

position:1131940:-1
position: 1131940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131998:-1
position: 1131998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1131460-1131539:-1:exon

position:1131460:-1
position: 1131460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131539:-1
position: 1131539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1130885-1131042:-1:exon

position:1130885:-1
position: 1130885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1131042:-1
position: 1131042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1129486-1130702:-1:exon

position:1130702:-1
position: 1130702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 3
translation: MAKTVAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSEDYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLLSYDRTDEPDPEERGSEENYSRPEAANEFYDGDHDNDKESDVEI
SIO_010081: HDAC3
subclass of: SO_0000673
so part of: HDAC3
location: complement(join(1130633..1130702,1130885..1131042,1131460..1131539,1131940..1131998,1132129..1132218,1132543..1132607,1132847..1132920,1133012..1133092,1133356..1133489,1135668..1135723,1135811..1135867,1137023..1137104,1138326..1138468,1143207..1143289,1143445..1143499))
location: region:1130633-1143499:-1
so has part: feature:1143445-1143499:-1:exon
so has part: feature:1143207-1143289:-1:exon
so has part: feature:1138326-1138468:-1:exon
so has part: feature:1137023-1137104:-1:exon
so has part: feature:1135811-1135867:-1:exon
so has part: feature:1135668-1135723:-1:exon
so has part: feature:1133356-1133489:-1:exon
so has part: feature:1133012-1133092:-1:exon
so has part: feature:1132847-1132920:-1:exon
so has part: feature:1132543-1132607:-1:exon
so has part: feature:1132129-1132218:-1:exon
so has part: feature:1131940-1131998:-1:exon
so has part: feature:1131460-1131539:-1:exon
so has part: feature:1130885-1131042:-1:exon
so has part: feature:1130633-1130702:-1:exon

XP_003210016.1
type: Protein
SIO_000068: ncbiprotein

position:1130633:-1
position: 1130633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1143499:-1
position: 1143499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1143445-1143499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1143207-1143289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138326-1138468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1137023-1137104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1135811-1135867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1135668-1135723:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1133356-1133489:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1133012-1133092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132847-1132920:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1132543-1132607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1132129-1132218:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1131940-1131998:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1131460-1131539:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1130885-1131042:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1130633-1130702:-1:exon

RELL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1145786..1153854
location: region:1145786-1153854:1
so has part: feature:1145786-1153854:1:exon
subclass of: SO_0000010

100544097
type: Gene
SIO_000068: ncbigene

position:1145786:1
position: 1145786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153854:1
position: 1153854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145786-1153854:1:exon

RELL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RELL2
product: RELT like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010718842.2
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: join(1145786..1146056,1146741..1146806,1146884..1146950,1147062..1147250,1150837..1151317,1153217..1153259,1153776..1153854)
location: region:1145786-1153854:1
so has part: feature:1145786-1146056:1:exon
so has part: feature:1146741-1146806:1:exon
so has part: feature:1146884-1146950:1:exon
so has part: feature:1147062-1147250:1:exon
so has part: feature:1150837-1151317:1:exon
so has part: feature:1153217-1153259:1:exon
so has part: feature:1153776-1153854:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145786-1146056:1:exon

position:1146056:1
position: 1146056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1146741-1146806:1:exon

position:1146741:1
position: 1146741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146806:1
position: 1146806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1146884-1146950:1:exon

position:1146884:1
position: 1146884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146950:1
position: 1146950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1147062-1147250:1:exon

position:1147062:1
position: 1147062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147250:1
position: 1147250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1150837-1151317:1:exon

position:1150837:1
position: 1150837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151317:1
position: 1151317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1153217-1153259:1:exon

position:1153217:1
position: 1153217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153259:1
position: 1153259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1153776-1153854:1:exon

position:1153776:1
position: 1153776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RELL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RELL2
product: RELT like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010718839.3
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: join(1145787..1146056,1146741..1146806,1146884..1146950,1147062..1147250,1150837..1151317,1153217..1153834)
location: region:1145787-1153834:1
so has part: feature:1145787-1146056:1:exon
so has part: feature:1146741-1146806:1:exon
so has part: feature:1146884-1146950:1:exon
so has part: feature:1147062-1147250:1:exon
so has part: feature:1150837-1151317:1:exon
so has part: feature:1153217-1153834:1:exon

position:1145787:1
position: 1145787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153834:1
position: 1153834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145787-1146056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146741-1146806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146884-1146950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147062-1147250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150837-1151317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1153217-1153834:1:exon

RELL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RELL2
product: RELT like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010718841.3
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: join(1145787..1146056,1146741..1146806,1146884..1146950,1147062..1147250,1150837..1151317,1153217..1153259,1153479..1153834)
location: region:1145787-1153834:1
so has part: feature:1145787-1146056:1:exon
so has part: feature:1146741-1146806:1:exon
so has part: feature:1146884-1146950:1:exon
so has part: feature:1147062-1147250:1:exon
so has part: feature:1150837-1151317:1:exon
so has part: feature:1153217-1153259:1:exon
so has part: feature:1153479-1153834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145787-1146056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146741-1146806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146884-1146950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147062-1147250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150837-1151317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1153217-1153259:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1153479-1153834:1:exon

position:1153479:1
position: 1153479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RELL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2
translation: MSDQSSSEDGESDSQHSLYMVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDELDPDNKDVLAELQANEEEELNEDTVEKIVRCIIQNEANAEALKEMLGDNDGDIAVPMPSLCPHRNSQDGGPPHHHTVHLGSTQAPCIHCSKRRRHPLHRQGRSKDGKGRMHPGETTVFSVGRFRVTHIGKKPAFHEQQDGAQPDGSKEPSTEELEHSSERFQREQARNGTVPTGSLENGAVQEGTQGGKGTEQSRTGTPVPGTAVGSSPGSTSRQRRLLSRRVLGGSSPSIPGQLGQEEAGLGSADEVSDIHGSLSLHEVPDEMGREDSSRRQPGEENMGQQEPSAVVHDRGATV
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: join(1145849..1146056,1146741..1146806,1146884..1146950,1147062..1147250,1150837..1151317,1153217..1153258)
location: region:1145849-1153258:1
so has part: feature:1145849-1146056:1:exon
so has part: feature:1146741-1146806:1:exon
so has part: feature:1146884-1146950:1:exon
so has part: feature:1147062-1147250:1:exon
so has part: feature:1150837-1151317:1:exon
so has part: feature:1153217-1153258:1:exon

XP_010717141.1
type: Protein
SIO_000068: ncbiprotein

position:1145849:1
position: 1145849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1153258:1
position: 1153258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145849-1146056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146741-1146806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146884-1146950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147062-1147250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150837-1151317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1153217-1153258:1:exon

RELL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2
translation: MSDQSSSEDGESDSQHSLYMVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDELDPDNKDVLAELQANEEEELNEDTVEKIVRCIIQNEANAEALKEMLGDNDGDIAVPMPSLCPHRNSQDGGPPHHHTVHLGSTQAPCIHCSKRRRHPLHRQGRSKDGKGRMHPGETTVFSVGRFRVTHIGKKPAFHEQQDGAQPDGSKEPSTEELEHSSERFQREQARNGTVPTGSLENGAVQEGTQGGKGTEQSRTGTPVPGTAVGSSPGSTSRQRRLLSRRVLGGSSPSIPGQLGQEEAGLGSADEVSDIHGSLSLHEVPDEMGREDSSRRQPGEENMGQQEPSAVVHDRGATV
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: join(1145849..1146056,1146741..1146806,1146884..1146950,1147062..1147250,1150837..1151317,1153217..1153258)
location: region:1145849-1153258:1
so has part: feature:1145849-1146056:1:exon
so has part: feature:1146741-1146806:1:exon
so has part: feature:1146884-1146950:1:exon
so has part: feature:1147062-1147250:1:exon
so has part: feature:1150837-1151317:1:exon
so has part: feature:1153217-1153258:1:exon

XP_010717143.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1145849-1146056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146741-1146806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146884-1146950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147062-1147250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150837-1151317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1153217-1153258:1:exon

RELL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RELL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RELT-like protein 2
translation: MSDQSSSEDGESDSQHSLYMVFLLVLVFFIMGLVGFLICHVLKKKGYRCRTFRDELDPDNKDVLAELQANEEEELNEDTVEKIVRCIIQNEANAEALKEMLGDNDGDIAVPMPSLCPHRNSQDGGPPHHHTVHLGSTQAPCIHCSKRRRHPLHRQGRSKDGKGRMHPGETTVFSVGRFRVTHIGKKPAFHEQQDGAQPDGSKEPSTEELEHSSERFQREQARNGTVPTGSLENGAVQEGTQGGKGTEQSRTGTPVPGTAVGSSPGSTSRQRRLLSRRVLGGSSPSIPGQLGQEEAGLGSADEVSDIHGSLSLHEVPDEMGREDSSRRQPGEENMGQQEPSAVVHDRGATV
SIO_010081: RELL2
subclass of: SO_0000673
so part of: RELL2
location: join(1145849..1146056,1146741..1146806,1146884..1146950,1147062..1147250,1150837..1151317,1153217..1153258)
location: region:1145849-1153258:1
so has part: feature:1145849-1146056:1:exon
so has part: feature:1146741-1146806:1:exon
so has part: feature:1146884-1146950:1:exon
so has part: feature:1147062-1147250:1:exon
so has part: feature:1150837-1151317:1:exon
so has part: feature:1153217-1153258:1:exon

XP_010717144.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1145849-1146056:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146741-1146806:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146884-1146950:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1147062-1147250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1150837-1151317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1153217-1153258:1:exon

FCHSD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1153972..1159165)
location: region:1153972-1159165:-1
so has part: feature:1153972-1159165:-1:exon
subclass of: SO_0000010

100543943
type: Gene
SIO_000068: ncbigene

position:1153972:-1
position: 1153972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159165:-1
position: 1159165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153972-1159165:-1:exon

FCHSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FCHSD1
product: FCH and double SH3 domains 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 148 samples with support for all annotated introns
transcript id: XM_010718837.3
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: complement(join(1153972..1154343,1154512..1154733,1154815..1155020,1155107..1155284,1155370..1155453,1155533..1155781,1155985..1156089,1156169..1156276,1156347..1156442,1156530..1156652,1156783..1156911,1156983..1157046,1157124..1157260,1157337..1157481,1157707..1157780,1158596..1158641,1158752..1158849,1159086..1159165))
location: region:1153972-1159165:-1
so has part: feature:1159086-1159165:-1:exon
so has part: feature:1158752-1158849:-1:exon
so has part: feature:1158596-1158641:-1:exon
so has part: feature:1157707-1157780:-1:exon
so has part: feature:1157337-1157481:-1:exon
so has part: feature:1157124-1157260:-1:exon
so has part: feature:1156983-1157046:-1:exon
so has part: feature:1156783-1156911:-1:exon
so has part: feature:1156530-1156652:-1:exon
so has part: feature:1156347-1156442:-1:exon
so has part: feature:1156169-1156276:-1:exon
so has part: feature:1155985-1156089:-1:exon
so has part: feature:1155533-1155781:-1:exon
so has part: feature:1155370-1155453:-1:exon
so has part: feature:1155107-1155284:-1:exon
so has part: feature:1154815-1155020:-1:exon
so has part: feature:1154512-1154733:-1:exon
so has part: feature:1153972-1154343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1159086-1159165:-1:exon

position:1159086:-1
position: 1159086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1158752-1158849:-1:exon

position:1158752:-1
position: 1158752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158849:-1
position: 1158849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1158596-1158641:-1:exon

position:1158596:-1
position: 1158596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158641:-1
position: 1158641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1157707-1157780:-1:exon

position:1157707:-1
position: 1157707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157780:-1
position: 1157780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1157337-1157481:-1:exon

position:1157337:-1
position: 1157337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157481:-1
position: 1157481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1157124-1157260:-1:exon

position:1157124:-1
position: 1157124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157260:-1
position: 1157260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1156983-1157046:-1:exon

position:1156983:-1
position: 1156983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157046:-1
position: 1157046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1156783-1156911:-1:exon

position:1156783:-1
position: 1156783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156911:-1
position: 1156911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1156530-1156652:-1:exon

position:1156530:-1
position: 1156530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156652:-1
position: 1156652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1156347-1156442:-1:exon

position:1156347:-1
position: 1156347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156442:-1
position: 1156442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1156169-1156276:-1:exon

position:1156169:-1
position: 1156169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156276:-1
position: 1156276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1155985-1156089:-1:exon

position:1155985:-1
position: 1155985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1156089:-1
position: 1156089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1155533-1155781:-1:exon

position:1155533:-1
position: 1155533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155781:-1
position: 1155781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1155370-1155453:-1:exon

position:1155370:-1
position: 1155370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155453:-1
position: 1155453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1155107-1155284:-1:exon

position:1155107:-1
position: 1155107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155284:-1
position: 1155284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1154815-1155020:-1:exon

position:1154815:-1
position: 1154815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155020:-1
position: 1155020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1154512-1154733:-1:exon

position:1154512:-1
position: 1154512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154733:-1
position: 1154733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1153972-1154343:-1:exon

position:1154343:-1
position: 1154343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FCHSD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FCHSD1
product: FCH and double SH3 domains 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 143 samples with support for all annotated introns
transcript id: XM_019620284.2
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: complement(join(1153973..1154343,1154512..1154579,1154643..1154733,1154815..1155020,1155107..1155284,1155370..1155453,1155533..1155781,1155985..1156089,1156169..1156276,1156347..1156442,1156530..1156652,1156783..1156911,1156983..1157046,1157124..1157260,1157337..1157481,1157707..1157780,1158596..1158641,1158752..1158849,1159086..1159165))
location: region:1153973-1159165:-1
so has part: feature:1159086-1159165:-1:exon
so has part: feature:1158752-1158849:-1:exon
so has part: feature:1158596-1158641:-1:exon
so has part: feature:1157707-1157780:-1:exon
so has part: feature:1157337-1157481:-1:exon
so has part: feature:1157124-1157260:-1:exon
so has part: feature:1156983-1157046:-1:exon
so has part: feature:1156783-1156911:-1:exon
so has part: feature:1156530-1156652:-1:exon
so has part: feature:1156347-1156442:-1:exon
so has part: feature:1156169-1156276:-1:exon
so has part: feature:1155985-1156089:-1:exon
so has part: feature:1155533-1155781:-1:exon
so has part: feature:1155370-1155453:-1:exon
so has part: feature:1155107-1155284:-1:exon
so has part: feature:1154815-1155020:-1:exon
so has part: feature:1154643-1154733:-1:exon
so has part: feature:1154512-1154579:-1:exon
so has part: feature:1153973-1154343:-1:exon

position:1153973:-1
position: 1153973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159086-1159165:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1158752-1158849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1158596-1158641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1157707-1157780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1157337-1157481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157124-1157260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1156983-1157046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1156783-1156911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1156530-1156652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1156347-1156442:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1156169-1156276:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1155985-1156089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1155533-1155781:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1155370-1155453:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1155107-1155284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1154815-1155020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1154643-1154733:-1:exon

position:1154643:-1
position: 1154643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1154512-1154579:-1:exon

position:1154579:-1
position: 1154579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1153973-1154343:-1:exon

FCHSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR and double SH3 domains protein 1 isoform X2
translation: MQPPPRKGKLSQVVKLHFAEQLCGLQSKQQRDAELLEDIRSYSKQRAAIEREYGQALQRLASQFVKRDWQRGRSDAGDSRSVFAVWKGIIEGTAYTGQARVTASESYRSLAAEATKSSRMSKERMLKKSMEQLQKAQAELLETVKELDKAKKQFSHLQRSSEVAKDKAADVEARLRKSDRRIFHTKASLQKLSAKFSMQMAEYSKQRAGVQNEYVLTLVSANAHLEHYYHVELPAIMQALDGDLYERLRDHLSTAGRAEVESCEITQDWFQRISEAAARVCREQDLLLFLQDHTAFMLVPEQRFQLDGIQEMSLLQPEDGGASLEKEARRWAMRATRDSKNKAHGEEVLQRLEARRHQVPEAEVAAVERQMEEVRENIWKAEVGRAKAEARLALLRTAGLDVDSWLAGAVRAGVELPRTPSTEAPTGLDPTEFDDYDSDETFEEAEPGHAARTYPYTCRVIFGYQGCHADELSIAQGEELEVIEDGDMEEWVKARNKAGQVGYVPEKYLLCLSCVGSESGSAASTGTTGPSGAALQRQLSSIMAAELVLEPGAWLVRALYDYEGQSPEELSFPEGAIIRVLPRAEDEVDDGFWTGDFDGRVGVFPSLVVEELTGARGTAGQELPSPSPPPFSPPGLALSASLGSGPELLLEVCRHEGTSSGQSSPDLAANRIRPLRAPPPPPGRAPDLEQDLS
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: complement(join(1154284..1154343,1154512..1154579,1154643..1154733,1154815..1155020,1155107..1155284,1155370..1155453,1155533..1155781,1155985..1156089,1156169..1156276,1156347..1156442,1156530..1156652,1156783..1156911,1156983..1157046,1157124..1157260,1157337..1157481,1157707..1157780,1158596..1158641,1158752..1158849,1159086..1159106))
location: region:1154284-1159106:-1
so has part: feature:1159086-1159106:-1:exon
so has part: feature:1158752-1158849:-1:exon
so has part: feature:1158596-1158641:-1:exon
so has part: feature:1157707-1157780:-1:exon
so has part: feature:1157337-1157481:-1:exon
so has part: feature:1157124-1157260:-1:exon
so has part: feature:1156983-1157046:-1:exon
so has part: feature:1156783-1156911:-1:exon
so has part: feature:1156530-1156652:-1:exon
so has part: feature:1156347-1156442:-1:exon
so has part: feature:1156169-1156276:-1:exon
so has part: feature:1155985-1156089:-1:exon
so has part: feature:1155533-1155781:-1:exon
so has part: feature:1155370-1155453:-1:exon
so has part: feature:1155107-1155284:-1:exon
so has part: feature:1154815-1155020:-1:exon
so has part: feature:1154643-1154733:-1:exon
so has part: feature:1154512-1154579:-1:exon
so has part: feature:1154284-1154343:-1:exon

XP_019475829.1
type: Protein
SIO_000068: ncbiprotein

position:1154284:-1
position: 1154284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159106:-1
position: 1159106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159086-1159106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1158752-1158849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1158596-1158641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1157707-1157780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1157337-1157481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157124-1157260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1156983-1157046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1156783-1156911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1156530-1156652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1156347-1156442:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1156169-1156276:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1155985-1156089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1155533-1155781:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1155370-1155453:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1155107-1155284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1154815-1155020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1154643-1154733:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1154512-1154579:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1154284-1154343:-1:exon

FCHSD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FCHSD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-BAR and double SH3 domains protein 1 isoform X1
translation: MQPPPRKGKLSQVVKLHFAEQLCGLQSKQQRDAELLEDIRSYSKQRAAIEREYGQALQRLASQFVKRDWQRGRSDAGDSRSVFAVWKGIIEGTAYTGQARVTASESYRSLAAEATKSSRMSKERMLKKSMEQLQKAQAELLETVKELDKAKKQFSHLQRSSEVAKDKAADVEARLRKSDRRIFHTKASLQKLSAKFSMQMAEYSKQRAGVQNEYVLTLVSANAHLEHYYHVELPAIMQALDGDLYERLRDHLSTAGRAEVESCEITQDWFQRISEAAARVCREQDLLLFLQDHTAFMLVPEQRFQLDGIQEMSLLQPEDGGASLEKEARRWAMRATRDSKNKAHGEEVLQRLEARRHQVPEAEVAAVERQMEEVRENIWKAEVGRAKAEARLALLRTAGLDVDSWLAGAVRAGVELPRTPSTEAPTGLDPTEFDDYDSDETFEEAEPGHAARTYPYTCRVIFGYQGCHADELSIAQGEELEVIEDGDMEEWVKARNKAGQVGYVPEKYLLCLSCVGSESGSAASTGTTGPSGAALQRQLSSIMAAELVLEPGAWLVRALYDYEGQSPEELSFPEGAIIRVLPRAEDEVDDGFWTGDFDGRVGVFPSLVVEELTGARGTAGQELPSPSPPPFSPPGLALSASLGSGPELLLEGECQGGGLGGTQSLSEPSVDLVCRHEGTSSGQSSPDLAANRIRPLRAPPPPPGRAPDLEQDLS
SIO_010081: FCHSD1
subclass of: SO_0000673
so part of: FCHSD1
location: complement(join(1154284..1154343,1154512..1154733,1154815..1155020,1155107..1155284,1155370..1155453,1155533..1155781,1155985..1156089,1156169..1156276,1156347..1156442,1156530..1156652,1156783..1156911,1156983..1157046,1157124..1157260,1157337..1157481,1157707..1157780,1158596..1158641,1158752..1158849,1159086..1159106))
location: region:1154284-1159106:-1
so has part: feature:1159086-1159106:-1:exon
so has part: feature:1158752-1158849:-1:exon
so has part: feature:1158596-1158641:-1:exon
so has part: feature:1157707-1157780:-1:exon
so has part: feature:1157337-1157481:-1:exon
so has part: feature:1157124-1157260:-1:exon
so has part: feature:1156983-1157046:-1:exon
so has part: feature:1156783-1156911:-1:exon
so has part: feature:1156530-1156652:-1:exon
so has part: feature:1156347-1156442:-1:exon
so has part: feature:1156169-1156276:-1:exon
so has part: feature:1155985-1156089:-1:exon
so has part: feature:1155533-1155781:-1:exon
so has part: feature:1155370-1155453:-1:exon
so has part: feature:1155107-1155284:-1:exon
so has part: feature:1154815-1155020:-1:exon
so has part: feature:1154512-1154733:-1:exon
so has part: feature:1154284-1154343:-1:exon

XP_010717139.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1159086-1159106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1158752-1158849:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1158596-1158641:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1157707-1157780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1157337-1157481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1157124-1157260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1156983-1157046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1156783-1156911:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1156530-1156652:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1156347-1156442:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1156169-1156276:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1155985-1156089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1155533-1155781:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1155370-1155453:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1155107-1155284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1154815-1155020:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1154512-1154733:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1154284-1154343:-1:exon

LOC104913232
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1159420..1162526
location: region:1159420-1162526:1
so has part: feature:1159420-1162526:1:exon
subclass of: SO_0000010

104913232
type: Gene
SIO_000068: ncbigene

position:1159420:1
position: 1159420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162526:1
position: 1162526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1159420-1162526:1:exon

LOC104913232
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913232
product: proteinase-activated receptor 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_010718843.3
SIO_010081: LOC104913232
subclass of: SO_0000673
so part of: LOC104913232
location: join(1159420..1160824,1161332..1162526)
location: region:1159420-1162526:1
so has part: feature:1159420-1160824:1:exon
so has part: feature:1161332-1162526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1159420-1160824:1:exon

position:1160824:1
position: 1160824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1161332-1162526:1:exon

position:1161332:1
position: 1161332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913232
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913232
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteinase-activated receptor 3-like
translation: MAQLVTSPGFAGFGVTLLLGLATQLPLAHSKGRAFWHLNPREEAECPDASLESFLNSTTTTILLPTLYSVVLLVGLPANVLACWVLAKNFRRCSSSLFLLNLAAADLLFILLLPFKISYHLLGNHWLFGDYLCRTMVALFYGNMYTSILFLTCIGVERYVSVAHPFLWKGSTETWGRAGVCVAIWLLVVLGVSPLLFYPQTEHISKLNITTCHDVQGKDNFFRHYFLCLVGLGFGVPFVLMIISHGCILARLLAKQESYGHVVRVLAVVLLAFLLCFTPSNVLLFMHYLQQDTGCNNITYSWYALALAFSAFNNCFDPFLYFYISKDFRGWIWEAGCCLWGLGTKGEWKKTALPLRSSEQSQL
SIO_010081: LOC104913232
subclass of: SO_0000673
so part of: LOC104913232
location: join(1160743..1160824,1161332..1162341)
location: region:1160743-1162341:1
so has part: feature:1160743-1160824:1:exon
so has part: feature:1161332-1162341:1:exon

XP_010717145.1
type: Protein
SIO_000068: ncbiprotein

position:1160743:1
position: 1160743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162341:1
position: 1162341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1160743-1160824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1161332-1162341:1:exon

ARAP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ARAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1162578..1178478)
location: region:1162578-1178478:-1
so has part: feature:1162578-1178478:-1:exon
subclass of: SO_0000010

100543789
type: Gene
SIO_000068: ncbigene

position:1162578:-1
position: 1162578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178478:-1
position: 1178478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1162578-1178478:-1:exon

ARAP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARAP3
product: ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019620290.2
SIO_010081: ARAP3
subclass of: SO_0000673
so part of: ARAP3
location: complement(join(1162578..1163696,1164211..1164249,1164444..1164581,1164656..1164719,1165241..1165276,1165372..1165454,1165559..1165692,1165805..1165933,1166053..1166167,1166288..1166362,1166641..1166709,1166845..1166992,1167446..1167551,1167822..1168034,1168171..1168334,1168595..1168658,1168727..1168925,1169015..1169117,1169278..1169431,1169519..1169635,1169897..1170053,1170253..1170435,1170550..1170635,1170708..1170907,1171156..1171262,1171575..1171762,1171951..1172071,1172849..1172918,1173145..1173414,1175104..1175168,1175310..1175389,1175642..1175703,1176165..1177099,1178339..1178478))
location: region:1162578-1178478:-1
so has part: feature:1178339-1178478:-1:exon
so has part: feature:1176165-1177099:-1:exon
so has part: feature:1175642-1175703:-1:exon
so has part: feature:1175310-1175389:-1:exon
so has part: feature:1175104-1175168:-1:exon
so has part: feature:1173145-1173414:-1:exon
so has part: feature:1172849-1172918:-1:exon
so has part: feature:1171951-1172071:-1:exon
so has part: feature:1171575-1171762:-1:exon
so has part: feature:1171156-1171262:-1:exon
so has part: feature:1170708-1170907:-1:exon
so has part: feature:1170550-1170635:-1:exon
so has part: feature:1170253-1170435:-1:exon
so has part: feature:1169897-1170053:-1:exon
so has part: feature:1169519-1169635:-1:exon
so has part: feature:1169278-1169431:-1:exon
so has part: feature:1169015-1169117:-1:exon
so has part: feature:1168727-1168925:-1:exon
so has part: feature:1168595-1168658:-1:exon
so has part: feature:1168171-1168334:-1:exon
so has part: feature:1167822-1168034:-1:exon
so has part: feature:1167446-1167551:-1:exon
so has part: feature:1166845-1166992:-1:exon
so has part: feature:1166641-1166709:-1:exon
so has part: feature:1166288-1166362:-1:exon
so has part: feature:1166053-1166167:-1:exon
so has part: feature:1165805-1165933:-1:exon
so has part: feature:1165559-1165692:-1:exon
so has part: feature:1165372-1165454:-1:exon
so has part: feature:1165241-1165276:-1:exon
so has part: feature:1164656-1164719:-1:exon
so has part: feature:1164444-1164581:-1:exon
so has part: feature:1164211-1164249:-1:exon
so has part: feature:1162578-1163696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1178339-1178478:-1:exon

position:1178339:-1
position: 1178339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1176165-1177099:-1:exon

position:1176165:-1
position: 1176165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177099:-1
position: 1177099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1175642-1175703:-1:exon

position:1175642:-1
position: 1175642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175703:-1
position: 1175703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1175310-1175389:-1:exon

position:1175310:-1
position: 1175310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175389:-1
position: 1175389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1175104-1175168:-1:exon

position:1175104:-1
position: 1175104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1175168:-1
position: 1175168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1173145-1173414:-1:exon

position:1173145:-1
position: 1173145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1173414:-1
position: 1173414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1172849-1172918:-1:exon

position:1172849:-1
position: 1172849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172918:-1
position: 1172918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1171951-1172071:-1:exon

position:1171951:-1
position: 1171951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172071:-1
position: 1172071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1171575-1171762:-1:exon

position:1171575:-1
position: 1171575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171762:-1
position: 1171762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1171156-1171262:-1:exon

position:1171156:-1
position: 1171156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171262:-1
position: 1171262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1170708-1170907:-1:exon

position:1170708:-1
position: 1170708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170907:-1
position: 1170907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1170550-1170635:-1:exon

position:1170550:-1
position: 1170550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170635:-1
position: 1170635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1170253-1170435:-1:exon

position:1170253:-1
position: 1170253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170435:-1
position: 1170435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1169897-1170053:-1:exon

position:1169897:-1
position: 1169897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1170053:-1
position: 1170053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1169519-1169635:-1:exon

position:1169519:-1
position: 1169519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169635:-1
position: 1169635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1169278-1169431:-1:exon

position:1169278:-1
position: 1169278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169431:-1
position: 1169431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1169015-1169117:-1:exon

position:1169015:-1
position: 1169015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1169117:-1
position: 1169117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1168727-1168925:-1:exon

position:1168727:-1
position: 1168727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168925:-1
position: 1168925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1168595-1168658:-1:exon

position:1168595:-1
position: 1168595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168658:-1
position: 1168658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1168171-1168334:-1:exon

position:1168171:-1
position: 1168171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168334:-1
position: 1168334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1167822-1168034:-1:exon

position:1167822:-1
position: 1167822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168034:-1
position: 1168034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1167446-1167551:-1:exon

position:1167446:-1
position: 1167446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167551:-1
position: 1167551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1166845-1166992:-1:exon

position:1166845:-1
position: 1166845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166992:-1
position: 1166992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1166641-1166709:-1:exon

position:1166641:-1
position: 1166641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166709:-1
position: 1166709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1166288-1166362:-1:exon

position:1166288:-1
position: 1166288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166362:-1
position: 1166362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1166053-1166167:-1:exon

position:1166053:-1
position: 1166053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166167:-1
position: 1166167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1165805-1165933:-1:exon

position:1165805:-1
position: 1165805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165933:-1
position: 1165933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1165559-1165692:-1:exon

position:1165559:-1
position: 1165559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165692:-1
position: 1165692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1165372-1165454:-1:exon

position:1165372:-1
position: 1165372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165454:-1
position: 1165454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1165241-1165276:-1:exon

position:1165241:-1
position: 1165241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165276:-1
position: 1165276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1164656-1164719:-1:exon

position:1164656:-1
position: 1164656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164719:-1
position: 1164719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1164444-1164581:-1:exon

position:1164444:-1
position: 1164444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164581:-1
position: 1164581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1164211-1164249:-1:exon

position:1164211:-1
position: 1164211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164249:-1
position: 1164249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1162578-1163696:-1:exon

position:1163696:-1
position: 1163696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARAP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARAP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3
translation: MSSPCTPDSDIADWLATIHLERYRDLFKQHGFHLARDVSALDNKQLQQLGITATGHRKRILNLAEKTRLLGYPHPRAPQMGEDATKAEPGVATDAFGMQQCGAMPSQAMPPQKDLDPPLVRPVPKPRTVFYRPKLEQGSAAIPPAHSPDRDRTAGAFVVLEGFVPGESSTDLETPRATMGTGTSRLGAREEARLPTVPDHGETEETPEKPCLCVPSVPPRLRHRAPVAELSNVGATGRPPSVPGVGQGRMEMVSNVIYEGLKSPLAPVEDSGREDSPRGQAFTQDPSPQELTQLDEKPNRASWPGGGLPPIPQRPASKPELSEPPISPYSETTFVNTVPAREQKVRIVPSGQGYEAVTEPELKRETQRTSSEYSSEGRSEDEETRTRLIERIAQNDTEGYSTVDAPRAKGTPFSLPPHLYPDEVLDDLTISPYASYTSLSEPRPAMLSGWLDKLSPQGNYVFQRRYVRFDGKNLMYFSSEKEPYPKGVIPLSVIEMVRSTKDNKFQVVTSHRIFVFRAENETQRNEWCSTLQQKVTDQHLVGTRPRPPNTAHCQKSGTLELKGQKSKVFAVLSLPEMWLYKSEQFFKMGIGICMIEMRGSTIREAKNRTFELITPSKIFSFVAESEREKREWMEALQEAIAETLYDYEVAEKIWSNKANRYCADCWAQSPDWASINLCVVICKQCAGQHRSLGSNISKVQSLKLDTSVWSNEIVQLFIVLGNDRANRFWAARIPASEVLHPDASTEQRRDFISRKYRDGRYRLPHPHYASQEDVLQALCTAVAGPGLLKTILQFFSAAEAGLAADPKAHEVAPVAEPWLDLESKRNHAGVPGPEGVYNEITQPVAYSGYLHRSMAHPRLPGAKKSREDFQRVWCSLERALLIFETEKCTEPLSHIQSGDLLSLGVSRAQPLSSPGPTERFHFTLELFLTGEKVQQLGADSADTLQAWASAIGKWFTPVSCHCLLGYEFQRVGQLRYKCMLNPERWQRAFFILQKAHLFICPAEEDGAEDSINLRRLQELSLVPPAETPEKKEMLVLVEMGRTFYLQGLSRADTAAWYADIQASAGGRGNALRDQQLSRGDIPIIVDSCIAFITQYGLRHEGIYRKNGAKSRIKVLMEEFRRDARNVKLRISDNFIEDVTDVLKRFFRELEDPVFTLELHPQWKEAAAISSKPQRLERYKELIHRLPRLNRKTLAALIGHLYRVQKCADLNQMSTKNLSLLFAPSLFQTDGKGEHEVKVMEDLIDNYVTIFNIDEDQVSQMELENSLITTWKDTQLSQAGDLIIEVYLEQKLPDCCVTLKVSPTMTAEELTNQVLEMRNVAASLDIWLTFEVLENGELERPLHPKEKVLEQALQWCKLPEPSAAYLLVRKVPIGEGSCLFTGAKRETPKCGLLKCREEPPKLLGNKFYERYFVIRDRQLLLLKEKRSAKPEREWPLDVAKVYMGIRKKLKPPAPWGFTLSMDKQQLYLVCTGQAELWDWITSILKTQHDDLRPVILRRRSSSDLAKQKFGTMPLVPLHGDSTDATMLSANQTLRRLHTRRTLSMFFPMKVHQDSLEEQQEKEMDTEPVYEEVGNFPELATLELQRGLLADPSPVPAMDRSQKPSSSPEQPPAPVLRSSLPPSPAQRLPDPSITKAVSLERGLNLECDKAPSYGLRATLTASLERNLEPPTVLARDQEQTAMLGHSSSPETSISTKKRSAQPSSPISDKLIQELSSIILKKSDSQTQGTGTGSGQPVT
SIO_010081: ARAP3
subclass of: SO_0000673
so part of: ARAP3
location: complement(join(1163121..1163696,1164211..1164249,1164444..1164581,1164656..1164719,1165241..1165276,1165372..1165454,1165559..1165692,1165805..1165933,1166053..1166167,1166288..1166362,1166641..1166709,1166845..1166992,1167446..1167551,1167822..1168034,1168171..1168334,1168595..1168658,1168727..1168925,1169015..1169117,1169278..1169431,1169519..1169635,1169897..1170053,1170253..1170435,1170550..1170635,1170708..1170907,1171156..1171262,1171575..1171762,1171951..1172071,1172849..1172918,1173145..1173414,1175104..1175168,1175310..1175389,1175642..1175703,1176165..1177060))
location: region:1163121-1177060:-1
so has part: feature:1176165-1177060:-1:exon
so has part: feature:1175642-1175703:-1:exon
so has part: feature:1175310-1175389:-1:exon
so has part: feature:1175104-1175168:-1:exon
so has part: feature:1173145-1173414:-1:exon
so has part: feature:1172849-1172918:-1:exon
so has part: feature:1171951-1172071:-1:exon
so has part: feature:1171575-1171762:-1:exon
so has part: feature:1171156-1171262:-1:exon
so has part: feature:1170708-1170907:-1:exon
so has part: feature:1170550-1170635:-1:exon
so has part: feature:1170253-1170435:-1:exon
so has part: feature:1169897-1170053:-1:exon
so has part: feature:1169519-1169635:-1:exon
so has part: feature:1169278-1169431:-1:exon
so has part: feature:1169015-1169117:-1:exon
so has part: feature:1168727-1168925:-1:exon
so has part: feature:1168595-1168658:-1:exon
so has part: feature:1168171-1168334:-1:exon
so has part: feature:1167822-1168034:-1:exon
so has part: feature:1167446-1167551:-1:exon
so has part: feature:1166845-1166992:-1:exon
so has part: feature:1166641-1166709:-1:exon
so has part: feature:1166288-1166362:-1:exon
so has part: feature:1166053-1166167:-1:exon
so has part: feature:1165805-1165933:-1:exon
so has part: feature:1165559-1165692:-1:exon
so has part: feature:1165372-1165454:-1:exon
so has part: feature:1165241-1165276:-1:exon
so has part: feature:1164656-1164719:-1:exon
so has part: feature:1164444-1164581:-1:exon
so has part: feature:1164211-1164249:-1:exon
so has part: feature:1163121-1163696:-1:exon

XP_019475835.1
type: Protein
SIO_000068: ncbiprotein

position:1163121:-1
position: 1163121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177060:-1
position: 1177060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1176165-1177060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1175642-1175703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1175310-1175389:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1175104-1175168:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1173145-1173414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1172849-1172918:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1171951-1172071:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1171575-1171762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1171156-1171262:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1170708-1170907:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1170550-1170635:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1170253-1170435:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1169897-1170053:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1169519-1169635:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1169278-1169431:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1169015-1169117:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1168727-1168925:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1168595-1168658:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1168171-1168334:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1167822-1168034:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1167446-1167551:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1166845-1166992:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1166641-1166709:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1166288-1166362:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1166053-1166167:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1165805-1165933:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1165559-1165692:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1165372-1165454:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1165241-1165276:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1164656-1164719:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1164444-1164581:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1164211-1164249:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1163121-1163696:-1:exon

LOC100543634
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100543634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1182824..1188280)
location: region:1182824-1188280:-1
so has part: feature:1182824-1188280:-1:exon
subclass of: SO_0000010

100543634
type: Gene
SIO_000068: ncbigene

position:1182824:-1
position: 1182824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1188280:-1
position: 1188280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1182824-1188280:-1:exon

LOC100543634
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543634
product: START domain-containing protein 10-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003209980.4
SIO_010081: LOC100543634
subclass of: SO_0000673
so part of: LOC100543634
location: complement(join(1182824..1183600,1183721..1183773,1184976..1185093,1185168..1185271,1185352..1185499,1187799..1188280))
location: region:1182824-1188280:-1
so has part: feature:1187799-1188280:-1:exon
so has part: feature:1185352-1185499:-1:exon
so has part: feature:1185168-1185271:-1:exon
so has part: feature:1184976-1185093:-1:exon
so has part: feature:1183721-1183773:-1:exon
so has part: feature:1182824-1183600:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1187799-1188280:-1:exon

position:1187799:-1
position: 1187799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1185352-1185499:-1:exon

position:1185352:-1
position: 1185352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185499:-1
position: 1185499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1185168-1185271:-1:exon

position:1185168:-1
position: 1185168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185271:-1
position: 1185271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1184976-1185093:-1:exon

position:1184976:-1
position: 1184976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1185093:-1
position: 1185093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1183721-1183773:-1:exon

position:1183721:-1
position: 1183721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1183773:-1
position: 1183773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1182824-1183600:-1:exon

position:1183600:-1
position: 1183600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100543634
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543634
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: START domain-containing protein 10-like
translation: MSRGGEMVYIPDDSDFSSFREQCESAEGWHCRYNKAGVTVWSQGQEESCTVQKIKTRISCKDVSAETLYDVLHDTHYRKKWDSHMIETHDIGRLTVNADVGYYSWKCPSPLKNRDFVTLRSWLPLGNDYIILNYSVKHPKYPPRKDFVRAVSLQTGYLIKANGTSACVLYYLTQVDPRGSLPKWVVNRVSQFVAPKAMKKIYKAGLKYPEWKRRHDPGYKPWVYPEQNTLPSLSLAELSLQHADSLEHIDETGLSEEHLSASDHEA
SIO_010081: LOC100543634
subclass of: SO_0000673
so part of: LOC100543634
location: complement(join(1183388..1183600,1183721..1183773,1184976..1185093,1185168..1185271,1185352..1185499,1187799..1187963))
location: region:1183388-1187963:-1
so has part: feature:1187799-1187963:-1:exon
so has part: feature:1185352-1185499:-1:exon
so has part: feature:1185168-1185271:-1:exon
so has part: feature:1184976-1185093:-1:exon
so has part: feature:1183721-1183773:-1:exon
so has part: feature:1183388-1183600:-1:exon

XP_003210028.2
type: Protein
SIO_000068: ncbiprotein

position:1183388:-1
position: 1183388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1187963:-1
position: 1187963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1187799-1187963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1185352-1185499:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1185168-1185271:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1184976-1185093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1183721-1183773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1183388-1183600:-1:exon

PCDH1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1259175..1310123
location: region:1259175-1310123:1
so has part: feature:1259175-1310123:1:exon
subclass of: SO_0000010

100549686
type: Gene
SIO_000068: ncbigene

position:1259175:1
position: 1259175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1310123:1
position: 1310123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259175-1310123:1:exon

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PCDH1
product: protocadherin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_010718846.3
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: join(1259175..1259346,1265711..1266525,1267858..1270050,1283706..1283925,1306256..1310123)
location: region:1259175-1310123:1
so has part: feature:1259175-1259346:1:exon
so has part: feature:1265711-1266525:1:exon
so has part: feature:1267858-1270050:1:exon
so has part: feature:1283706-1283925:1:exon
so has part: feature:1306256-1310123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1259175-1259346:1:exon

position:1259346:1
position: 1259346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1265711-1266525:1:exon

position:1265711:1
position: 1265711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1266525:1
position: 1266525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1267858-1270050:1:exon

position:1267858:1
position: 1267858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1270050:1
position: 1270050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1283706-1283925:1:exon

position:1283706:1
position: 1283706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283925:1
position: 1283925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1306256-1310123:1:exon

position:1306256:1
position: 1306256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PCDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PCDH1
product: protocadherin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010718850.2
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: join(1259175..1259346,1265711..1266525,1267858..1270050,1283706..1283925,1304878..1304919,1306256..1306338)
location: region:1259175-1306338:1
so has part: feature:1259175-1259346:1:exon
so has part: feature:1265711-1266525:1:exon
so has part: feature:1267858-1270050:1:exon
so has part: feature:1283706-1283925:1:exon
so has part: feature:1304878-1304919:1:exon
so has part: feature:1306256-1306338:1:exon

position:1306338:1
position: 1306338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259175-1259346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265711-1266525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267858-1270050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283706-1283925:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1304878-1304919:1:exon

position:1304878:1
position: 1304878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1304919:1
position: 1304919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1306256-1306338:1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X1
translation: MCAATGAAQQVGVAQRAAAPILALRRIGKDFPASWLKDLRVHQPLRPQTFRAAPLRHRMRTLASCLALWLLCQLPSLACGTRVVYKVQEEQPPNTLIGSLASDYGFPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCYLEFEVSITDLIQNNSPRLLEGQIEVLDINDNTPNFASPVLTLTIPENTNIGALFSIPPAMDRDSGPNGVASYELLAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITIVDMNDNAPKFEKALYEAELSENSPVGHSVIQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRNTGLITVQGPIDREDVSTLKFSVMAKDKGANPKSARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPNDLVMEVSASDADSGSNAKLVYSLVTDPSSKDSFTIDPDSGEIRVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDTGVNAELTYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECTEFGHSDTCWMPGQSSPSRRPKNALKLSTFVPYQDRGSQEQVGNGSPRLSEERSTKMANLRLLPTYSAFSNSSHETCKDSPMEEIPLTQTSDFQPATTPSSQTTKREIYL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: join(1259190..1259346,1265711..1266525,1267858..1270050,1283706..1283925,1306256..1306641)
location: region:1259190-1306641:1
so has part: feature:1259190-1259346:1:exon
so has part: feature:1265711-1266525:1:exon
so has part: feature:1267858-1270050:1:exon
so has part: feature:1283706-1283925:1:exon
so has part: feature:1306256-1306641:1:exon

XP_010717148.1
type: Protein
SIO_000068: ncbiprotein

position:1259190:1
position: 1259190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1306641:1
position: 1306641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259190-1259346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265711-1266525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267858-1270050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283706-1283925:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1306256-1306641:1:exon

PCDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PCDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-1 isoform X2
translation: MCAATGAAQQVGVAQRAAAPILALRRIGKDFPASWLKDLRVHQPLRPQTFRAAPLRHRMRTLASCLALWLLCQLPSLACGTRVVYKVQEEQPPNTLIGSLASDYGFPDVGHLYKLEVGAPYLRVDGKTGDIYTTETSIDRESLRECQHLLPGEPCYLEFEVSITDLIQNNSPRLLEGQIEVLDINDNTPNFASPVLTLTIPENTNIGALFSIPPAMDRDSGPNGVASYELLAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDREQWDSYDLTIKVQDGGNPPRASSALLRITIVDMNDNAPKFEKALYEAELSENSPVGHSVIQVKANDSDQGANAEIDYSFHQASDMVRRLLRLDRNTGLITVQGPIDREDVSTLKFSVMAKDKGANPKSARTQVVVTIKDMNDNAPSIEIRGIGLVTHQDGMANISEDVPVETAVALVQVSDRDEGENAVVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYESVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFSQSFTEVAFPENNEPNDLVMEVSASDADSGSNAKLVYSLVTDPSSKDSFTIDPDSGEIRVKAVLDREQRERYEFLVVAADKGSPSLKGTASVAINVMDRNDNDPKFMLSGYNFSVMENMPPLSPVGMVTVIDADKGENARIQLSVEQDNGDFVIQNGTGTILSSISFDREQQSTYTFRLKAVDGGDPPRSAYVGVTINVLDENDNAPFITSPSNATYKHILPHTSPGQQVSKVKAEDIDTGVNAELTYSITGGNPFELFQISPQSGDITLEKEILRKHHGLHRLVVRVNDKGKPSRHGTALVHFYVNETLANRTLLDTLVGHSLDTPLDIDIAGDPEYERSKQRSNILFGVIAGIVAVTLVIVLVVLVRYCRQREAKSGYQAGKKETKDLYAPKQASKSGKSKNKVKKSKSPKPPKPTEDEEETGLQKSLKFNLMNDSVSDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPATNTFVGTGDNNSTGSEQYSDYSYRTNPQKYTNKQLPHRRVTFSAASQAQDLQDPSQHSYYDSGLEESETPSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENESPERSRL
SIO_010081: PCDH1
subclass of: SO_0000673
so part of: PCDH1
location: join(1259190..1259346,1265711..1266525,1267858..1270050,1283706..1283925,1304878..1304903)
location: region:1259190-1304903:1
so has part: feature:1259190-1259346:1:exon
so has part: feature:1265711-1266525:1:exon
so has part: feature:1267858-1270050:1:exon
so has part: feature:1283706-1283925:1:exon
so has part: feature:1304878-1304903:1:exon

XP_010717152.1
type: Protein
SIO_000068: ncbiprotein

position:1304903:1
position: 1304903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1259190-1259346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1265711-1266525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1267858-1270050:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1283706-1283925:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1304878-1304903:1:exon

LOC104913233
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913233
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1457138..1473032)
location: region:1457138-1473032:-1
so has part: feature:1457138-1473032:-1:exon
subclass of: SO_0000011

104913233
type: Gene
SIO_000068: ncbigene

position:1457138:-1
position: 1457138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1473032:-1
position: 1473032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1457138-1473032:-1:exon

LOC104913233
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913233
product: uncharacterized LOC104913233, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161369.1
SIO_010081: LOC104913233
subclass of: SO_0000673
so part of: LOC104913233
location: complement(join(1457138..1457346,1457451..1457609,1457929..1458006,1472908..1473032))
location: region:1457138-1473032:-1
so has part: feature:1472908-1473032:-1:exon
so has part: feature:1457929-1458006:-1:exon
so has part: feature:1457451-1457609:-1:exon
so has part: feature:1457138-1457346:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1472908-1473032:-1:exon

position:1472908:-1
position: 1472908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1457929-1458006:-1:exon

position:1457929:-1
position: 1457929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458006:-1
position: 1458006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1457451-1457609:-1:exon

position:1457451:-1
position: 1457451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1457609:-1
position: 1457609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1457138-1457346:-1:exon

position:1457346:-1
position: 1457346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913233
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913233
product: uncharacterized LOC104913233, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004161370.1
SIO_010081: LOC104913233
subclass of: SO_0000673
so part of: LOC104913233
location: complement(join(1457138..1457346,1457929..1458006,1472908..1473023))
location: region:1457138-1473023:-1
so has part: feature:1472908-1473023:-1:exon
so has part: feature:1457929-1458006:-1:exon
so has part: feature:1457138-1457346:-1:exon

position:1473023:-1
position: 1473023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472908-1473023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1457929-1458006:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1457138-1457346:-1:exon

LOC104913234
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1529958..1587259)
location: region:1529958-1587259:-1
so has part: feature:1529958-1587259:-1:exon
subclass of: SO_0000011

104913234
type: Gene
SIO_000068: ncbigene

position:1529958:-1
position: 1529958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1587259:-1
position: 1587259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1529958-1587259:-1:exon

LOC104913234
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913234
product: uncharacterized LOC104913234, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004161363.1
SIO_010081: LOC104913234
subclass of: SO_0000673
so part of: LOC104913234
location: complement(join(1529958..1538811,1541383..1541486,1544562..1544742,1545955..1546091,1551108..1551210,1552546..1552734,1554581..1554798,1557028..1557210,1568234..1568330,1572418..1572517,1574676..1574785,1582244..1582389,1583880..1583950,1584771..1587259))
location: region:1529958-1587259:-1
so has part: feature:1584771-1587259:-1:exon
so has part: feature:1583880-1583950:-1:exon
so has part: feature:1582244-1582389:-1:exon
so has part: feature:1574676-1574785:-1:exon
so has part: feature:1572418-1572517:-1:exon
so has part: feature:1568234-1568330:-1:exon
so has part: feature:1557028-1557210:-1:exon
so has part: feature:1554581-1554798:-1:exon
so has part: feature:1552546-1552734:-1:exon
so has part: feature:1551108-1551210:-1:exon
so has part: feature:1545955-1546091:-1:exon
so has part: feature:1544562-1544742:-1:exon
so has part: feature:1541383-1541486:-1:exon
so has part: feature:1529958-1538811:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1584771-1587259:-1:exon

position:1584771:-1
position: 1584771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1583880-1583950:-1:exon

position:1583880:-1
position: 1583880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583950:-1
position: 1583950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1582244-1582389:-1:exon

position:1582244:-1
position: 1582244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582389:-1
position: 1582389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1574676-1574785:-1:exon

position:1574676:-1
position: 1574676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574785:-1
position: 1574785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1572418-1572517:-1:exon

position:1572418:-1
position: 1572418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572517:-1
position: 1572517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1568234-1568330:-1:exon

position:1568234:-1
position: 1568234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568330:-1
position: 1568330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1557028-1557210:-1:exon

position:1557028:-1
position: 1557028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1557210:-1
position: 1557210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1554581-1554798:-1:exon

position:1554581:-1
position: 1554581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1554798:-1
position: 1554798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1552546-1552734:-1:exon

position:1552546:-1
position: 1552546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1552734:-1
position: 1552734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1551108-1551210:-1:exon

position:1551108:-1
position: 1551108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1551210:-1
position: 1551210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1545955-1546091:-1:exon

position:1545955:-1
position: 1545955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1546091:-1
position: 1546091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1544562-1544742:-1:exon

position:1544562:-1
position: 1544562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1544742:-1
position: 1544742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1541383-1541486:-1:exon

position:1541383:-1
position: 1541383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1541486:-1
position: 1541486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1529958-1538811:-1:exon

position:1538811:-1
position: 1538811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913234
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913234
product: uncharacterized LOC104913234, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004161362.1
SIO_010081: LOC104913234
subclass of: SO_0000673
so part of: LOC104913234
location: complement(join(1546785..1549227,1551108..1551210,1552546..1552734,1554581..1554798,1557028..1557210,1568234..1568330,1572418..1572517,1574676..1574785,1582244..1582389,1583880..1587256))
location: region:1546785-1587256:-1
so has part: feature:1583880-1587256:-1:exon
so has part: feature:1582244-1582389:-1:exon
so has part: feature:1574676-1574785:-1:exon
so has part: feature:1572418-1572517:-1:exon
so has part: feature:1568234-1568330:-1:exon
so has part: feature:1557028-1557210:-1:exon
so has part: feature:1554581-1554798:-1:exon
so has part: feature:1552546-1552734:-1:exon
so has part: feature:1551108-1551210:-1:exon
so has part: feature:1546785-1549227:-1:exon

position:1546785:-1
position: 1546785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1587256:-1
position: 1587256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1583880-1587256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1582244-1582389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1574676-1574785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1572418-1572517:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1568234-1568330:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1557028-1557210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1554581-1554798:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1552546-1552734:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1551108-1551210:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1546785-1549227:-1:exon

position:1549227:-1
position: 1549227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DELE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DELE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1587387..1608448
location: region:1587387-1608448:1
so has part: feature:1587387-1608448:1:exon
subclass of: SO_0000010

100549993
type: Gene
SIO_000068: ncbigene

position:1587387:1
position: 1587387
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1608448:1
position: 1608448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1587387-1608448:1:exon

DELE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DELE1
product: DAP3 binding cell death enhancer 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 168 samples with support for all annotated introns
transcript id: XM_031555647.1
SIO_010081: DELE1
subclass of: SO_0000673
so part of: DELE1
location: join(<1587387..1587449,1587555..1587675,1588030..1588167,1593336..1593391,1594876..1594969,1595684..1595826,1596596..1596754,1598402..1598494,1601917..1602073,1602308..1602572,1606093..1608448)
location: region:1587387-1608448:1
so has part: feature:1587387-1587449:1:exon
so has part: feature:1587555-1587675:1:exon
so has part: feature:1588030-1588167:1:exon
so has part: feature:1593336-1593391:1:exon
so has part: feature:1594876-1594969:1:exon
so has part: feature:1595684-1595826:1:exon
so has part: feature:1596596-1596754:1:exon
so has part: feature:1598402-1598494:1:exon
so has part: feature:1601917-1602073:1:exon
so has part: feature:1602308-1602572:1:exon
so has part: feature:1606093-1608448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1587387-1587449:1:exon

position:1587449:1
position: 1587449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1587555-1587675:1:exon

position:1587555:1
position: 1587555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1587675:1
position: 1587675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1588030-1588167:1:exon

position:1588030:1
position: 1588030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1588167:1
position: 1588167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1593336-1593391:1:exon

position:1593336:1
position: 1593336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1593391:1
position: 1593391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1594876-1594969:1:exon

position:1594876:1
position: 1594876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1594969:1
position: 1594969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1595684-1595826:1:exon

position:1595684:1
position: 1595684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1595826:1
position: 1595826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1596596-1596754:1:exon

position:1596596:1
position: 1596596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1596754:1
position: 1596754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1598402-1598494:1:exon

position:1598402:1
position: 1598402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1598494:1
position: 1598494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1601917-1602073:1:exon

position:1601917:1
position: 1601917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602073:1
position: 1602073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1602308-1602572:1:exon

position:1602308:1
position: 1602308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1602572:1
position: 1602572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1606093-1608448:1:exon

position:1606093:1
position: 1606093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DELE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DELE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: death ligand signal enhancer
translation: GRRQPLPGLLPRYSVLDAVTWGALAALLLQLVRQISWLRSLPDARREPRPPWLPSLPARHAVVPDASAGLPCAQLGPCFLQKAEVAPENSSSDIPSGPGERQLWAEEGEFPVPQCSSLRPVPHSTKENPAQREHLEEAAFQLQQIFRVDISIAFNILGIESMRAGHYQIGYTCFKLAADRGYSKAQFNVGLCYEHGRGTEKDLEKAAFYYYRAASSCHPMAQYRYARCLLCHSPENEWHRLQKAVTFLEQAAEAGLTEAQAYLGVFYMRGLQPKEKRGLKYLLLAAENGDAQSRYHVGVCYEKGLGVQQNLAEAMRHYRQSAAAGNRNAQERLRVIEEEMEDVQRKHPFPFGMRASSSSPCFWATERMPAGLHTFQPRQPALTLPHSWSADRLHMMTLGSTEWSHALGNRASPLELQGLEPHHCGY
SIO_010081: DELE1
subclass of: SO_0000673
so part of: DELE1
location: join(<1587387..1587449,1587555..1587675,1588030..1588167,1593336..1593391,1594876..1594969,1595684..1595826,1596596..1596754,1598402..1598494,1601917..1602073,1602308..1602564)
location: region:1587387-1602564:1
so has part: feature:1587387-1587449:1:exon
so has part: feature:1587555-1587675:1:exon
so has part: feature:1588030-1588167:1:exon
so has part: feature:1593336-1593391:1:exon
so has part: feature:1594876-1594969:1:exon
so has part: feature:1595684-1595826:1:exon
so has part: feature:1596596-1596754:1:exon
so has part: feature:1598402-1598494:1:exon
so has part: feature:1601917-1602073:1:exon
so has part: feature:1602308-1602564:1:exon

XP_031411507.1
type: Protein
SIO_000068: ncbiprotein

position:1602564:1
position: 1602564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1587387-1587449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1587555-1587675:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1588030-1588167:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1593336-1593391:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594876-1594969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1595684-1595826:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1596596-1596754:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1598402-1598494:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1601917-1602073:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1602308-1602564:1:exon

PCDH12
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PCDH12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1605640..1615486)
location: region:1605640-1615486:-1
so has part: feature:1605640-1615486:-1:exon
subclass of: SO_0000010

100550299
type: Gene
SIO_000068: ncbigene

position:1605640:-1
position: 1605640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615486:-1
position: 1615486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1605640-1615486:-1:exon

PCDH12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PCDH12
product: protocadherin 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 173 samples with support for all annotated introns
transcript id: XM_010718851.3
SIO_010081: PCDH12
subclass of: SO_0000673
so part of: PCDH12
location: complement(join(1605640..1606466,1610910..1611061,1612025..1612119,1612489..1615486))
location: region:1605640-1615486:-1
so has part: feature:1612489-1615486:-1:exon
so has part: feature:1612025-1612119:-1:exon
so has part: feature:1610910-1611061:-1:exon
so has part: feature:1605640-1606466:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1612489-1615486:-1:exon

position:1612489:-1
position: 1612489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1612025-1612119:-1:exon

position:1612025:-1
position: 1612025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612119:-1
position: 1612119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1610910-1611061:-1:exon

position:1610910:-1
position: 1610910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611061:-1
position: 1611061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1605640-1606466:-1:exon

position:1606466:-1
position: 1606466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCDH12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PCDH12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protocadherin-12
translation: MQRQAGEPTATAHSWAMGILGGLLLLGHLPLQLRALWWLFFLSADAQEVATITVQYRLFEEVPEGTVIGMLAEHFEHGESGEMGENFRLLQSPGMFPLRVGSGDGELSTAGRVDREQLCRHSDPCWVSFDVLAAEQMALIHVEVQVLDINDHSPRFPMSELELEMSESASLQMHIPLDRALDADAGPNAHCSYALSPSEHFALEVVSGSDGTKHAELVVVKEVDRELHSSFDLVLTAADHGEPPRSGTALIKVIVLDSNDNSPVFAESSLVVEVREDALPGTLLVTVTATDPDQGPNGEIEYSLSKHAPPEVLSTFGIDARGGSVVLRRPLDYEETHAYELDVQARDLGANPIPAHCKVVVRVLDVNDNAPDVRVSWAAWEPVVSEAVPKDSFVALVTASDPDSGNNGLVHCSLSPGDDHFRLKQTNSHSYLLMTNAVLDRELRAEYNLTLVARDQGEHSLAVWKHLTICISDVNDNAPTFERTSYECVVEENGDVPAFLLTVHATDPDLGFNGKVTYSIRDSTVSGLVSINPTSGDIIALRAFDHEQMSSLEFLVTAEDGGQPVLASNVSVRLEVLDRNDNAPVVTEPPLVGGMATLSVLVGAETGCVWVTSGNGSAMGTVLANVSCSDTPLLFTIVARDGDSGRNGALRYDIVGGDGAGLVVLDPLSGQAFLNASNASGLAGTQRDLAVLISDGGDEPLHAQACVRLLFRRHGAFSKMSAGGPGWLSPPVVAAICLAALLGSCLLLSALTLSLRKKEKKDGMAYNCREAEDAHRQQQLKKPPRQIQKADIHLVPTPRGWPRGAESQQPNVEGSPQPPPLLTPTLYRTLRNQRVSRDSDEEQGMFTLPIVQRQPCPSHRPKNSPTDVVGKLPPEEPPLSAPQPRPPQHILRSLVRLSLVALAEQSPNGEFAMESAPVQQISQLLSLLHQGQFQPKTNHRGNKYTAKNGSRAAGLDADCLSTKDSGHGESEAEDRDSESGFELSVQQLVGEELETLLEPQAELALKRLTADPAWVARLSLPPTSNYKDNVFIPGSLHSPQDEEAVGQEKPRTFETFGKGNGSDSNAAGTRLASTFLSEMSTLFEMILSQKVQVHNETGSGLLRQLSARGKSLGLDDSAPVL
SIO_010081: PCDH12
subclass of: SO_0000673
so part of: PCDH12
location: complement(join(1606105..1606466,1610910..1611061,1612025..1612119,1612489..1615245))
location: region:1606105-1615245:-1
so has part: feature:1612489-1615245:-1:exon
so has part: feature:1612025-1612119:-1:exon
so has part: feature:1610910-1611061:-1:exon
so has part: feature:1606105-1606466:-1:exon

XP_010717153.1
type: Protein
SIO_000068: ncbiprotein

position:1606105:-1
position: 1606105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1615245:-1
position: 1615245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1612489-1615245:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1612025-1612119:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1610910-1611061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1606105-1606466:-1:exon

SMIM33
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1617601..1626941)
location: region:1617601-1626941:-1
so has part: feature:1617601-1626941:-1:exon
subclass of: SO_0000010

116217193
type: Gene
SIO_000068: ncbigene

position:1617601:-1
position: 1617601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1626941:-1
position: 1626941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1617601-1626941:-1:exon

SMIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SMIM33
product: small integral membrane protein 33, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031555638.1
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: complement(join(1617601..1619553,1621313..1621399,1621483..1621691,1626565..1626702,1626784..1626941))
location: region:1617601-1626941:-1
so has part: feature:1626784-1626941:-1:exon
so has part: feature:1626565-1626702:-1:exon
so has part: feature:1621483-1621691:-1:exon
so has part: feature:1621313-1621399:-1:exon
so has part: feature:1617601-1619553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1626784-1626941:-1:exon

position:1626784:-1
position: 1626784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1626565-1626702:-1:exon

position:1626565:-1
position: 1626565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1626702:-1
position: 1626702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1621483-1621691:-1:exon

position:1621483:-1
position: 1621483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621691:-1
position: 1621691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1621313-1621399:-1:exon

position:1621313:-1
position: 1621313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621399:-1
position: 1621399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1617601-1619553:-1:exon

position:1619553:-1
position: 1619553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SMIM33
product: small integral membrane protein 33, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031555636.1
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: complement(join(1617601..1619553,1621313..1621399,1621483..1621691,1626515..1626702,1626784..1626941))
location: region:1617601-1626941:-1
so has part: feature:1626784-1626941:-1:exon
so has part: feature:1626515-1626702:-1:exon
so has part: feature:1621483-1621691:-1:exon
so has part: feature:1621313-1621399:-1:exon
so has part: feature:1617601-1619553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1626784-1626941:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1626515-1626702:-1:exon

position:1626515:-1
position: 1626515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1621483-1621691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621313-1621399:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1617601-1619553:-1:exon

SMIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SMIM33
product: small integral membrane protein 33, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031555640.1
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: complement(join(1617601..1619553,1621483..1621691,1626515..1626702,1626784..1626940))
location: region:1617601-1626940:-1
so has part: feature:1626784-1626940:-1:exon
so has part: feature:1626515-1626702:-1:exon
so has part: feature:1621483-1621691:-1:exon
so has part: feature:1617601-1619553:-1:exon

position:1626940:-1
position: 1626940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626784-1626940:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1626515-1626702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1621483-1621691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1617601-1619553:-1:exon

SMIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SMIM33
product: small integral membrane protein 33, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031555637.1
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: complement(join(1617601..1619553,1621313..1621399,1621483..1621691,1626515..1626938))
location: region:1617601-1626938:-1
so has part: feature:1626515-1626938:-1:exon
so has part: feature:1621483-1621691:-1:exon
so has part: feature:1621313-1621399:-1:exon
so has part: feature:1617601-1619553:-1:exon

position:1626938:-1
position: 1626938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1626515-1626938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1621483-1621691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1621313-1621399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1617601-1619553:-1:exon

SMIM33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SMIM33
product: small integral membrane protein 33, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_031555639.1
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: complement(join(1617601..1619553,1620360..1621296))
location: region:1617601-1621296:-1
so has part: feature:1620360-1621296:-1:exon
so has part: feature:1617601-1619553:-1:exon

position:1621296:-1
position: 1621296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620360-1621296:-1:exon

position:1620360:-1
position: 1620360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1617601-1619553:-1:exon

SMIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 33 isoform X1
translation: MTLSAKALSPCSAMNASAPSSPLRHPEPQDAAAFTPISVVRSVTKKSDALPVITAIVVIFVLLAIFIIVVVHYGPQLRTIQITLYHEPMPQDLDDGVHLMDWRKLGSQKKPAQPGQWEPGGNLSCQCSCKHHLPCGSIEPNVIEVTYL
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: complement(join(1619130..1619553,1621313..1621335))
location: region:1619130-1621335:-1
so has part: feature:1621313-1621335:-1:exon
so has part: feature:1619130-1619553:-1:exon

XP_031411496.1
type: Protein
SIO_000068: ncbiprotein

position:1619130:-1
position: 1619130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621335:-1
position: 1621335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1621313-1621335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619130-1619553:-1:exon

SMIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 33 isoform X1
translation: MTLSAKALSPCSAMNASAPSSPLRHPEPQDAAAFTPISVVRSVTKKSDALPVITAIVVIFVLLAIFIIVVVHYGPQLRTIQITLYHEPMPQDLDDGVHLMDWRKLGSQKKPAQPGQWEPGGNLSCQCSCKHHLPCGSIEPNVIEVTYL
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: complement(join(1619130..1619553,1621313..1621335))
location: region:1619130-1621335:-1
so has part: feature:1621313-1621335:-1:exon
so has part: feature:1619130-1619553:-1:exon

XP_031411497.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1621313-1621335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619130-1619553:-1:exon

SMIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 33 isoform X1
translation: MTLSAKALSPCSAMNASAPSSPLRHPEPQDAAAFTPISVVRSVTKKSDALPVITAIVVIFVLLAIFIIVVVHYGPQLRTIQITLYHEPMPQDLDDGVHLMDWRKLGSQKKPAQPGQWEPGGNLSCQCSCKHHLPCGSIEPNVIEVTYL
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: complement(join(1619130..1619553,1621313..1621335))
location: region:1619130-1621335:-1
so has part: feature:1621313-1621335:-1:exon
so has part: feature:1619130-1619553:-1:exon

XP_031411498.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1621313-1621335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619130-1619553:-1:exon

SMIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 33 isoform X2
translation: MNASAPSSPLRHPEPQDAAAFTPISVVRSVTKKSDALPVITAIVVIFVLLAIFIIVVVHYGPQLRTIQITLYHEPMPQDLDDGVHLMDWRKLGSQKKPAQPGQWEPGGNLSCQCSCKHHLPCGSIEPNVIEVTYL
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: complement(1619130..1619537)
location: region:1619130-1619537:-1
so has part: feature:1619130-1619537:-1:exon

XP_031411499.1
type: Protein
SIO_000068: ncbiprotein

position:1619537:-1
position: 1619537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1619130-1619537:-1:exon

SMIM33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SMIM33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 33 isoform X2
translation: MNASAPSSPLRHPEPQDAAAFTPISVVRSVTKKSDALPVITAIVVIFVLLAIFIIVVVHYGPQLRTIQITLYHEPMPQDLDDGVHLMDWRKLGSQKKPAQPGQWEPGGNLSCQCSCKHHLPCGSIEPNVIEVTYL
SIO_010081: SMIM33
subclass of: SO_0000673
so part of: SMIM33
location: complement(1619130..1619537)
location: region:1619130-1619537:-1
so has part: feature:1619130-1619537:-1:exon

XP_031411500.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1619130-1619537:-1:exon

ECSCR
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1622840..1641886
location: region:1622840-1641886:1
so has part: feature:1622840-1641886:1:exon
subclass of: SO_0000010

104913235
type: Gene
SIO_000068: ncbigene

position:1622840:1
position: 1622840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1641886:1
position: 1641886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1622840-1641886:1:exon

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_010718852.3
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: join(1622840..1622983,1632055..1632096,1632312..1632362,1633754..1633867,1634218..1634265,1636043..1636090,1636676..1636774,1637847..1637945,1638525..1638561,1639652..1639751,1640274..1641885)
location: region:1622840-1641885:1
so has part: feature:1622840-1622983:1:exon
so has part: feature:1632055-1632096:1:exon
so has part: feature:1632312-1632362:1:exon
so has part: feature:1633754-1633867:1:exon
so has part: feature:1634218-1634265:1:exon
so has part: feature:1636043-1636090:1:exon
so has part: feature:1636676-1636774:1:exon
so has part: feature:1637847-1637945:1:exon
so has part: feature:1638525-1638561:1:exon
so has part: feature:1639652-1639751:1:exon
so has part: feature:1640274-1641885:1:exon

position:1641885:1
position: 1641885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1622840-1622983:1:exon

position:1622983:1
position: 1622983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1632055-1632096:1:exon

position:1632055:1
position: 1632055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632096:1
position: 1632096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1632312-1632362:1:exon

position:1632312:1
position: 1632312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632362:1
position: 1632362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1633754-1633867:1:exon

position:1633754:1
position: 1633754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1633867:1
position: 1633867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1634218-1634265:1:exon

position:1634218:1
position: 1634218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1634265:1
position: 1634265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1636043-1636090:1:exon

position:1636043:1
position: 1636043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636090:1
position: 1636090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1636676-1636774:1:exon

position:1636676:1
position: 1636676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636774:1
position: 1636774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1637847-1637945:1:exon

position:1637847:1
position: 1637847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1637945:1
position: 1637945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1638525-1638561:1:exon

position:1638525:1
position: 1638525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1638561:1
position: 1638561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1639652-1639751:1:exon

position:1639652:1
position: 1639652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1639751:1
position: 1639751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1640274-1641885:1:exon

position:1640274:1
position: 1640274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator isoform X1
translation: MLAPALHPLLWLFGCVLLGGTTAAMDSSIHNVTDQPQSTTRNHEVENNTSEASVKSAAPADLNLTHMDQTTTTKSSSVSPTLLTSSAQDEKSSGSRNTTTPSTPGEEYKRRESTTAAATQGTSRTVTPALEISSSLPMPTPTEYESPLTVVAFGVISFIVILVVVVIILVSVVSLRFKCNRSKDSEDKQKPGSSMVSESCSAGTSEKDNSITLISMKNINMNNSMTYPPSEKVL
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: join(1622926..1622983,1632055..1632096,1632312..1632362,1633754..1633867,1634218..1634265,1636043..1636090,1636676..1636774,1637847..1637945,1638525..1638561,1639652..1639751,1640274..1640282)
location: region:1622926-1640282:1
so has part: feature:1622926-1622983:1:exon
so has part: feature:1632055-1632096:1:exon
so has part: feature:1632312-1632362:1:exon
so has part: feature:1633754-1633867:1:exon
so has part: feature:1634218-1634265:1:exon
so has part: feature:1636043-1636090:1:exon
so has part: feature:1636676-1636774:1:exon
so has part: feature:1637847-1637945:1:exon
so has part: feature:1638525-1638561:1:exon
so has part: feature:1639652-1639751:1:exon
so has part: feature:1640274-1640282:1:exon

XP_010717154.1
type: Protein
SIO_000068: ncbiprotein

position:1622926:1
position: 1622926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1640282:1
position: 1640282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1622926-1622983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1632055-1632096:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1632312-1632362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1633754-1633867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1634218-1634265:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1636043-1636090:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1636676-1636774:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1637847-1637945:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1638525-1638561:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1639652-1639751:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1640274-1640282:1:exon

ECSCR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ECSCR
product: endothelial cell surface expressed chemotaxis and apoptosis regulator, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XM_010718853.3
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: join(1633051..1633289,1633754..1633867,1634218..1634265,1636043..1636090,1636676..1636774,1637847..1637945,1638525..1638561,1639652..1639751,1640274..1641886)
location: region:1633051-1641886:1
so has part: feature:1633051-1633289:1:exon
so has part: feature:1633754-1633867:1:exon
so has part: feature:1634218-1634265:1:exon
so has part: feature:1636043-1636090:1:exon
so has part: feature:1636676-1636774:1:exon
so has part: feature:1637847-1637945:1:exon
so has part: feature:1638525-1638561:1:exon
so has part: feature:1639652-1639751:1:exon
so has part: feature:1640274-1641886:1:exon

position:1633051:1
position: 1633051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1633051-1633289:1:exon

position:1633289:1
position: 1633289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1633754-1633867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1634218-1634265:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1636043-1636090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1636676-1636774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1637847-1637945:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1638525-1638561:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1639652-1639751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1640274-1641886:1:exon

ECSCR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ECSCR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endothelial cell-specific chemotaxis regulator isoform X2
translation: MTAFPFPCYLVLDLQEASVKSAAPADLNLTHMDQTTTTKSSSVSPTLLTSSAQDEKSSGSRNTTTPSTPGEEYKRRESTTAAATQGTSRTVTPALEISSSLPMPTPTEYESPLTVVAFGVISFIVILVVVVIILVSVVSLRFKCNRSKDSEDKQKPGSSMVSESCSAGTSEKDNSITLISMKNINMNNSMTYPPSEKVL
SIO_010081: ECSCR
subclass of: SO_0000673
so part of: ECSCR
location: join(1633244..1633289,1633754..1633867,1634218..1634265,1636043..1636090,1636676..1636774,1637847..1637945,1638525..1638561,1639652..1639751,1640274..1640282)
location: region:1633244-1640282:1
so has part: feature:1633244-1633289:1:exon
so has part: feature:1633754-1633867:1:exon
so has part: feature:1634218-1634265:1:exon
so has part: feature:1636043-1636090:1:exon
so has part: feature:1636676-1636774:1:exon
so has part: feature:1637847-1637945:1:exon
so has part: feature:1638525-1638561:1:exon
so has part: feature:1639652-1639751:1:exon
so has part: feature:1640274-1640282:1:exon

XP_010717155.1
type: Protein
SIO_000068: ncbiprotein

position:1633244:1
position: 1633244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1633244-1633289:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1633754-1633867:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1634218-1634265:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1636043-1636090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1636676-1636774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1637847-1637945:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1638525-1638561:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1639652-1639751:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1640274-1640282:1:exon

DNAJC18
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DNAJC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1644051..1658101
location: region:1644051-1658101:1
so has part: feature:1644051-1658101:1:exon
subclass of: SO_0000010

104913267
type: Gene
SIO_000068: ncbigene

position:1644051:1
position: 1644051
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1658101:1
position: 1658101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1644051-1658101:1:exon

DNAJC18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DNAJC18
product: DnaJ heat shock protein family (Hsp40) member C18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_019620299.2
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: join(<1644051..1644279,1645037..1645222,1649869..1649981,1651271..1651380,1653348..1653520,1657116..1658101)
location: region:1644051-1658101:1
so has part: feature:1644051-1644279:1:exon
so has part: feature:1645037-1645222:1:exon
so has part: feature:1649869-1649981:1:exon
so has part: feature:1651271-1651380:1:exon
so has part: feature:1653348-1653520:1:exon
so has part: feature:1657116-1658101:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1644051-1644279:1:exon

position:1644279:1
position: 1644279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1645037-1645222:1:exon

position:1645037:1
position: 1645037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645222:1
position: 1645222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1649869-1649981:1:exon

position:1649869:1
position: 1649869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1649981:1
position: 1649981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1651271-1651380:1:exon

position:1651271:1
position: 1651271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651380:1
position: 1651380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1653348-1653520:1:exon

position:1653348:1
position: 1653348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1653520:1
position: 1653520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1657116-1658101:1:exon

position:1657116:1
position: 1657116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJC18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DNAJC18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 18
translation: LGLGPRGCSGPRGCSVPGGDAAPVCASRIKSCRNYYEILGVERDATEEELKKAYRRLALKFHPDKNRAPGATEAFKAIGNAFAVLSNPEKRLRYDEYGSDHEHVSTGQARHYNYYTEFEADITPEEIFNVFFGGHFPTGNIHMFSNVARDAHYYPRRHRNERAWTQEQEEEENRPQNSYSAFIQLMPVFIIIIVSVITQLMATNPPYSLFYKSSIGHVISRETENLQVPYYVDKNFEKNYQGAELQELERTVEKDYIDYIQTSCWKEKQQKSDLSNLAKLYRDERLKQKAESLKLEHCEKLSSLIGMHKGG
SIO_010081: DNAJC18
subclass of: SO_0000673
so part of: DNAJC18
location: join(<1644051..1644279,1645037..1645222,1649869..1649981,1651271..1651380,1653348..1653520,1657116..1657240)
location: region:1644051-1657240:1
so has part: feature:1644051-1644279:1:exon
so has part: feature:1645037-1645222:1:exon
so has part: feature:1649869-1649981:1:exon
so has part: feature:1651271-1651380:1:exon
so has part: feature:1653348-1653520:1:exon
so has part: feature:1657116-1657240:1:exon

XP_019475844.1
type: Protein
SIO_000068: ncbiprotein

position:1657240:1
position: 1657240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1644051-1644279:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1645037-1645222:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1649869-1649981:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1651271-1651380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1653348-1653520:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1657116-1657240:1:exon

PROB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PROB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1660325..1664255
location: region:1660325-1664255:1
so has part: feature:1660325-1664255:1:exon
subclass of: SO_0000010

104913236
type: Gene
SIO_000068: ncbigene

position:1660325:1
position: 1660325
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1664255:1
position: 1664255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660325-1664255:1:exon

PROB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PROB1
product: proline rich basic protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010718855.3
SIO_010081: PROB1
subclass of: SO_0000673
so part of: PROB1
location: <1660325..1664255
location: region:1660325-1664255:1
so has part: feature:1660325-1664255:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1660325-1664255:1:exon

PROB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PROB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proline-rich basic protein 1
translation: CGEPRGTELPGVPAKDLFECVDVELESGDAKKGYGKRRTVPKRQIQLKRKERKEAGFFPWGDSSAPQPLPPARKEPPGKGRAGGEDFKFNYKQFVKTASLDGDASKTRMASSLVKNVLAKKMQYEQLIKMEQQKALRGSSTSSGPSSAGTDLLGDGMEGKSSSLSKSDLSASAEDVRLVDMGLGPVGAHRPAKGVVLSEATRENVCRLKKTFNELNERMRYQEVVQCQRLPAAEPSAERTPYWRARALFEGRSGDGKVPAVTPKFEKPQKPWPSLRQRAIRPSRPQLVPFEPKSLVPPDVPPQSIFTSQARDVRLGPHSRGEEKPPPAPREPPGSGISVGTSTEPNSKGKGLVPQPRDVRKLLKSSYSLSFGAARGPAAPSPSRESSGEPKPPSPLVIHCTSVRRSEPTPSIVPPAGGDVGTDGVREPAPARTEGTAASTRSHPAQGSPVQISKVQSVRREAATSKSPQPGPATCRQRSEIHVPSLGGTVEETHVESHLHVLVGPRSPPVAVEASLSRSSAVLRTEKTLLLPPPPLSPTEEDEERGHGVIIGDSAGADQHRSSGDNPGSVQDVKSAVRSTLKPPTCEQPGSQLASAGKHGPTDSTGPTAPFQAREAGEGPSVPPVPLSSRPLEQRETVEHVTKWPGASDPHLTVVQADNSNYLTIPVKAPKPSPVPKVPLVPSPGTTSFGTPLVPHPNSVSFGTPSVPNMATMHFGTPSVPSPATAPIGTPLVPRPTSMPFGTPSVPSPASASLGASMVPNLSSFETPVVSSLTSTSLGTPLVPSAANSSFGTPLFPYPLGAPFGTSLVPSPATPSFGTASVPRLPNSTFGTSLVPNPSSTPFATPSVPNPAGSSFGAPLVPNPSSTPFASPSIPKRASSSSGTPLVTNPATTSFGTVPFSRPLNSTFGAPLVPNSSNTPFMIPSVPMPASSSFGTPMVNNPDPTSLVYPSISNVARSSFGSPLFPSPASAPLGTGVSPHPGGEAPWSKPLPEPPQPSDALATAVPPAQSQPHMEDAPQRTEGSSPSSKSTPSPTRPFAPHPSAHRKMLVDPGSGKCYYMEAPRQPQLKTLYDPETGQYMEVLIPPVPMASHAGFYHAPFNPMLYGTPYMPYGSFPGLSAPPLPTVSSPAQPDPQGQPPTSENPRGFSGTFSPDPKGEGPPAAGGPDCGYLESPYYIPTGMRASPSPSQPPARASPASTEKGPLPPL
SIO_010081: PROB1
subclass of: SO_0000673
so part of: PROB1
location: <1660325..1663948
location: region:1660325-1663948:1
so has part: feature:1660325-1663948:1:exon

XP_010717157.2
type: Protein
SIO_000068: ncbiprotein

position:1663948:1
position: 1663948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1660325-1663948:1:exon

MZB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MZB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1664568..1665913
location: region:1664568-1665913:1
so has part: feature:1664568-1665913:1:exon
subclass of: SO_0000010

104913237
type: Gene
SIO_000068: ncbigene

position:1664568:1
position: 1664568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665913:1
position: 1665913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1664568-1665913:1:exon

MZB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MZB1
product: marginal zone B and B1 cell specific protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_010718856.3
SIO_010081: MZB1
subclass of: SO_0000673
so part of: MZB1
location: join(1664568..1664817,1665062..1665168,1665242..1665346,1665414..1665913)
location: region:1664568-1665913:1
so has part: feature:1664568-1664817:1:exon
so has part: feature:1665062-1665168:1:exon
so has part: feature:1665242-1665346:1:exon
so has part: feature:1665414-1665913:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1664568-1664817:1:exon

position:1664817:1
position: 1664817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1665062-1665168:1:exon

position:1665062:1
position: 1665062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665168:1
position: 1665168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1665242-1665346:1:exon

position:1665242:1
position: 1665242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665346:1
position: 1665346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1665414-1665913:1:exon

position:1665414:1
position: 1665414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MZB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MZB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: marginal zone B- and B1-cell-specific protein
translation: MAQQCQGSSMQAVLVLCVAFSLAARTGAENTCGDPEAPSSSHSIPAPQMSAEERFSPHMPEALRCDACQAIAFQLEGWLSRAEAKQGRKALSESDYVEVLEQSCSQDWELYGVQELRGERRLMGPGLPGQEAMSVAMMGGPWPGRLAKMCHSLVGEHSEEQLYRAHRRGPTDLRELLCHGEKGPCAHLGGSKAGGSAPPKALQNEL
SIO_010081: MZB1
subclass of: SO_0000673
so part of: MZB1
location: join(1664596..1664817,1665062..1665168,1665242..1665346,1665414..1665600)
location: region:1664596-1665600:1
so has part: feature:1664596-1664817:1:exon
so has part: feature:1665062-1665168:1:exon
so has part: feature:1665242-1665346:1:exon
so has part: feature:1665414-1665600:1:exon

XP_010717158.1
type: Protein
SIO_000068: ncbiprotein

position:1664596:1
position: 1664596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1665600:1
position: 1665600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1664596-1664817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1665062-1665168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1665242-1665346:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1665414-1665600:1:exon

SLC23A1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1665965..1672317
location: region:1665965-1672317:1
so has part: feature:1665965-1672317:1:exon
subclass of: SO_0000010

104913238
type: Gene
SIO_000068: ncbigene

position:1665965:1
position: 1665965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1672317:1
position: 1672317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1665965-1672317:1:exon

SLC23A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC23A1
product: solute carrier family 23 member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_010718857.1
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: join(1665965..1666051,1666424..1666480,1666577..1666684,1666760..1666917,1666988..1667076,1667157..1667224,1667292..1667473,1667588..1667708,1667789..1667945,1668048..1668195,1668405..1668510,1668589..1668718,1668828..1668971,1669275..1669370,1669446..1672317)
location: region:1665965-1672317:1
so has part: feature:1665965-1666051:1:exon
so has part: feature:1666424-1666480:1:exon
so has part: feature:1666577-1666684:1:exon
so has part: feature:1666760-1666917:1:exon
so has part: feature:1666988-1667076:1:exon
so has part: feature:1667157-1667224:1:exon
so has part: feature:1667292-1667473:1:exon
so has part: feature:1667588-1667708:1:exon
so has part: feature:1667789-1667945:1:exon
so has part: feature:1668048-1668195:1:exon
so has part: feature:1668405-1668510:1:exon
so has part: feature:1668589-1668718:1:exon
so has part: feature:1668828-1668971:1:exon
so has part: feature:1669275-1669370:1:exon
so has part: feature:1669446-1672317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1665965-1666051:1:exon

position:1666051:1
position: 1666051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1666424-1666480:1:exon

position:1666424:1
position: 1666424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666480:1
position: 1666480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1666577-1666684:1:exon

position:1666577:1
position: 1666577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666684:1
position: 1666684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1666760-1666917:1:exon

position:1666760:1
position: 1666760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1666917:1
position: 1666917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1666988-1667076:1:exon

position:1666988:1
position: 1666988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667076:1
position: 1667076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1667157-1667224:1:exon

position:1667157:1
position: 1667157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667224:1
position: 1667224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1667292-1667473:1:exon

position:1667292:1
position: 1667292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667473:1
position: 1667473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1667588-1667708:1:exon

position:1667588:1
position: 1667588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667708:1
position: 1667708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1667789-1667945:1:exon

position:1667789:1
position: 1667789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1667945:1
position: 1667945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1668048-1668195:1:exon

position:1668048:1
position: 1668048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668195:1
position: 1668195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1668405-1668510:1:exon

position:1668405:1
position: 1668405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668510:1
position: 1668510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1668589-1668718:1:exon

position:1668589:1
position: 1668589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668718:1
position: 1668718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1668828-1668971:1:exon

position:1668828:1
position: 1668828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1668971:1
position: 1668971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1669275-1669370:1:exon

position:1669275:1
position: 1669275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669370:1
position: 1669370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1669446-1672317:1:exon

position:1669446:1
position: 1669446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC23A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC23A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: solute carrier family 23 member 1
translation: MGTRSGELPQPQDTSPALPPSGPQRPAGAGRAPVEDRGPPPARRQFDMLYRIEDVPPWYLCILLGFQHYLTCFSGTIAVPFLLAESLCVGKDQLTVSYLIGTIFTCVGITTLIQTTVGIRLPLFQASALAFLVPAKAILALEKWQCPPEEQIYGNWVLPLNTSHIWQPRMREIQGAIVVSSLVEVFIGLLGLPGALLSYIGPLTVTPTVSLIGLSVFQAAGERAGSHWGIAALSIVLIVLFAQYLRNVTVRLPGYRWGHGFVLLRVQIFKMFPIILAIMVMWLLCYLLTRADVFPSHPEEYGYKARTDARGNILSVAPWFRFPYPCQWGLPTVTSAAVLGMFSATLAGIIESIGDYYSCARLSGAPAPPVHAINRGIFTEGISCIIAGLMGTGNGSTSSSPNIGVLGITKVGSRRVIQYGAGIMLILGTIGKFTALFASLPDPILGGMFCTLFGMITAVGLSNLQFVDMNSSRNLFVLGFSMFFGLTLPNYLDAHPKAINTGVPELDQILTVLLTTEMFVGGTLAFILDNTIPGTREERGLVQWKAGAHADSTASADLRSYDFPFGMSAVRRSRWLRHVPICPLFTGFAWRAKKSRAAADGTQDGADGTAVCTKV
SIO_010081: SLC23A1
subclass of: SO_0000673
so part of: SLC23A1
location: join(1666016..1666051,1666424..1666480,1666577..1666684,1666760..1666917,1666988..1667076,1667157..1667224,1667292..1667473,1667588..1667708,1667789..1667945,1668048..1668195,1668405..1668510,1668589..1668718,1668828..1668971,1669275..1669370,1669446..1669693)
location: region:1666016-1669693:1
so has part: feature:1666016-1666051:1:exon
so has part: feature:1666424-1666480:1:exon
so has part: feature:1666577-1666684:1:exon
so has part: feature:1666760-1666917:1:exon
so has part: feature:1666988-1667076:1:exon
so has part: feature:1667157-1667224:1:exon
so has part: feature:1667292-1667473:1:exon
so has part: feature:1667588-1667708:1:exon
so has part: feature:1667789-1667945:1:exon
so has part: feature:1668048-1668195:1:exon
so has part: feature:1668405-1668510:1:exon
so has part: feature:1668589-1668718:1:exon
so has part: feature:1668828-1668971:1:exon
so has part: feature:1669275-1669370:1:exon
so has part: feature:1669446-1669693:1:exon

XP_010717159.1
type: Protein
SIO_000068: ncbiprotein

position:1666016:1
position: 1666016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669693:1
position: 1669693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666016-1666051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1666424-1666480:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1666577-1666684:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1666760-1666917:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1666988-1667076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1667157-1667224:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1667292-1667473:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1667588-1667708:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1667789-1667945:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1668048-1668195:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1668405-1668510:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1668589-1668718:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1668828-1668971:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1669275-1669370:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1669446-1669693:1:exon

PAIP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1672143..1678133)
location: region:1672143-1678133:-1
so has part: feature:1672143-1678133:-1:exon
subclass of: SO_0000010

100549840
type: Gene
SIO_000068: ncbigene

position:1672143:-1
position: 1672143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1678133:-1
position: 1678133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1672143-1678133:-1:exon

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 190 samples with support for all annotated introns
transcript id: XM_003210247.4
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: complement(join(1672143..1673245,1674458..1674637,1676917..1677076,1678053..1678133))
location: region:1672143-1678133:-1
so has part: feature:1678053-1678133:-1:exon
so has part: feature:1676917-1677076:-1:exon
so has part: feature:1674458-1674637:-1:exon
so has part: feature:1672143-1673245:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1678053-1678133:-1:exon

position:1678053:-1
position: 1678053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1676917-1677076:-1:exon

position:1676917:-1
position: 1676917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677076:-1
position: 1677076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1674458-1674637:-1:exon

position:1674458:-1
position: 1674458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674637:-1
position: 1674637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1672143-1673245:-1:exon

position:1673245:-1
position: 1673245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAIP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PAIP2
product: poly(A) binding protein interacting protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XM_010718858.3
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: complement(join(1672143..1673245,1674458..1674637,1676917..1677076,1678007..1678113))
location: region:1672143-1678113:-1
so has part: feature:1678007-1678113:-1:exon
so has part: feature:1676917-1677076:-1:exon
so has part: feature:1674458-1674637:-1:exon
so has part: feature:1672143-1673245:-1:exon

position:1678113:-1
position: 1678113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678007-1678113:-1:exon

position:1678007:-1
position: 1678007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1676917-1677076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1674458-1674637:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672143-1673245:-1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2
translation: MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: complement(join(1673180..1673245,1674458..1674637,1676917..1677054))
location: region:1673180-1677054:-1
so has part: feature:1676917-1677054:-1:exon
so has part: feature:1674458-1674637:-1:exon
so has part: feature:1673180-1673245:-1:exon

XP_003210295.1
type: Protein
SIO_000068: ncbiprotein

position:1673180:-1
position: 1673180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1677054:-1
position: 1677054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1676917-1677054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1674458-1674637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1673180-1673245:-1:exon

PAIP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PAIP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polyadenylate-binding protein-interacting protein 2
translation: MKDPSRSSTSPSIISEDVIINGHSHEDDNPFAEYMWMENEEEFNRQIEEELWEEEFIERCFQEMLEEEEEHEWFIPARDLPQTMDQIQDQFNDLVISDSSSLEDLVVKSNLNPNAKEFVPGVKYLNI
SIO_010081: PAIP2
subclass of: SO_0000673
so part of: PAIP2
location: complement(join(1673180..1673245,1674458..1674637,1676917..1677054))
location: region:1673180-1677054:-1
so has part: feature:1676917-1677054:-1:exon
so has part: feature:1674458-1674637:-1:exon
so has part: feature:1673180-1673245:-1:exon

XP_010717160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1676917-1677054:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1674458-1674637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1673180-1673245:-1:exon

MATR3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1683813..1710713)
location: region:1683813-1710713:-1
so has part: feature:1683813-1710713:-1:exon
subclass of: SO_0000010

100550148
type: Gene
SIO_000068: ncbigene

position:1683813:-1
position: 1683813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710713:-1
position: 1710713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1683813-1710713:-1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MATR3
product: matrin 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 144 samples with support for all annotated introns
transcript id: XM_010718861.3
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: complement(join(1683813..1684924,1686471..1686592,1687198..1687591,1689287..1689677,1690131..1690174,1691094..1691225,1692412..1692582,1692792..1692917,1693458..1693583,1694041..1694093,1695091..1695194,1695514..1695555,1696286..1696347,1710346..1710713))
location: region:1683813-1710713:-1
so has part: feature:1710346-1710713:-1:exon
so has part: feature:1696286-1696347:-1:exon
so has part: feature:1695514-1695555:-1:exon
so has part: feature:1695091-1695194:-1:exon
so has part: feature:1694041-1694093:-1:exon
so has part: feature:1693458-1693583:-1:exon
so has part: feature:1692792-1692917:-1:exon
so has part: feature:1692412-1692582:-1:exon
so has part: feature:1691094-1691225:-1:exon
so has part: feature:1690131-1690174:-1:exon
so has part: feature:1689287-1689677:-1:exon
so has part: feature:1687198-1687591:-1:exon
so has part: feature:1686471-1686592:-1:exon
so has part: feature:1683813-1684924:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1710346-1710713:-1:exon

position:1710346:-1
position: 1710346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1696286-1696347:-1:exon

position:1696286:-1
position: 1696286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696347:-1
position: 1696347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1695514-1695555:-1:exon

position:1695514:-1
position: 1695514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695555:-1
position: 1695555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1695091-1695194:-1:exon

position:1695091:-1
position: 1695091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695194:-1
position: 1695194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1694041-1694093:-1:exon

position:1694041:-1
position: 1694041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694093:-1
position: 1694093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1693458-1693583:-1:exon

position:1693458:-1
position: 1693458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693583:-1
position: 1693583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1692792-1692917:-1:exon

position:1692792:-1
position: 1692792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692917:-1
position: 1692917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1692412-1692582:-1:exon

position:1692412:-1
position: 1692412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1692582:-1
position: 1692582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1691094-1691225:-1:exon

position:1691094:-1
position: 1691094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691225:-1
position: 1691225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1690131-1690174:-1:exon

position:1690131:-1
position: 1690131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690174:-1
position: 1690174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1689287-1689677:-1:exon

position:1689287:-1
position: 1689287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689677:-1
position: 1689677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1687198-1687591:-1:exon

position:1687198:-1
position: 1687198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687591:-1
position: 1687591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1686471-1686592:-1:exon

position:1686471:-1
position: 1686471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686592:-1
position: 1686592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1683813-1684924:-1:exon

position:1684924:-1
position: 1684924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MATR3
product: matrin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_019620341.2
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: complement(join(1683813..1684924,1686471..1686592,1687198..1687591,1689287..1689677,1690131..1690174,1691094..1691225,1692412..1692582,1692792..1692917,1693458..1693583,1694041..1694093,1695091..1695194,1695514..1695555,1696286..1696347,1706941..1706970))
location: region:1683813-1706970:-1
so has part: feature:1706941-1706970:-1:exon
so has part: feature:1696286-1696347:-1:exon
so has part: feature:1695514-1695555:-1:exon
so has part: feature:1695091-1695194:-1:exon
so has part: feature:1694041-1694093:-1:exon
so has part: feature:1693458-1693583:-1:exon
so has part: feature:1692792-1692917:-1:exon
so has part: feature:1692412-1692582:-1:exon
so has part: feature:1691094-1691225:-1:exon
so has part: feature:1690131-1690174:-1:exon
so has part: feature:1689287-1689677:-1:exon
so has part: feature:1687198-1687591:-1:exon
so has part: feature:1686471-1686592:-1:exon
so has part: feature:1683813-1684924:-1:exon

position:1706970:-1
position: 1706970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1706941-1706970:-1:exon

position:1706941:-1
position: 1706941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1696286-1696347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695514-1695555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695091-1695194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694041-1694093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693458-1693583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1692792-1692917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692412-1692582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1691094-1691225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690131-1690174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1689287-1689677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687198-1687591:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686471-1686592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1683813-1684924:-1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MATR3
product: matrin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 197 samples with support for all annotated introns
transcript id: XM_010718860.3
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: complement(join(1683813..1684924,1687198..1687591,1689287..1689677,1690131..1690174,1691094..1691225,1692412..1692582,1692792..1692917,1693458..1693583,1694041..1694093,1695091..1695194,1695514..1695555,1696286..1696347,1700908..1706903))
location: region:1683813-1706903:-1
so has part: feature:1700908-1706903:-1:exon
so has part: feature:1696286-1696347:-1:exon
so has part: feature:1695514-1695555:-1:exon
so has part: feature:1695091-1695194:-1:exon
so has part: feature:1694041-1694093:-1:exon
so has part: feature:1693458-1693583:-1:exon
so has part: feature:1692792-1692917:-1:exon
so has part: feature:1692412-1692582:-1:exon
so has part: feature:1691094-1691225:-1:exon
so has part: feature:1690131-1690174:-1:exon
so has part: feature:1689287-1689677:-1:exon
so has part: feature:1687198-1687591:-1:exon
so has part: feature:1683813-1684924:-1:exon

position:1706903:-1
position: 1706903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1700908-1706903:-1:exon

position:1700908:-1
position: 1700908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1696286-1696347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695514-1695555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695091-1695194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694041-1694093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693458-1693583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1692792-1692917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692412-1692582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1691094-1691225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690131-1690174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1689287-1689677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687198-1687591:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1683813-1684924:-1:exon

MATR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MATR3
product: matrin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010718859.3
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: complement(join(1683813..1684924,1686471..1686592,1687198..1687591,1689287..1689677,1690131..1690174,1691094..1691225,1692412..1692582,1692792..1692917,1693458..1693583,1694041..1694093,1695091..1695194,1695514..1695555,1696286..1696347,1700908..1706900))
location: region:1683813-1706900:-1
so has part: feature:1700908-1706900:-1:exon
so has part: feature:1696286-1696347:-1:exon
so has part: feature:1695514-1695555:-1:exon
so has part: feature:1695091-1695194:-1:exon
so has part: feature:1694041-1694093:-1:exon
so has part: feature:1693458-1693583:-1:exon
so has part: feature:1692792-1692917:-1:exon
so has part: feature:1692412-1692582:-1:exon
so has part: feature:1691094-1691225:-1:exon
so has part: feature:1690131-1690174:-1:exon
so has part: feature:1689287-1689677:-1:exon
so has part: feature:1687198-1687591:-1:exon
so has part: feature:1686471-1686592:-1:exon
so has part: feature:1683813-1684924:-1:exon

position:1706900:-1
position: 1706900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1700908-1706900:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1696286-1696347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695514-1695555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695091-1695194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694041-1694093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693458-1693583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1692792-1692917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692412-1692582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1691094-1691225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690131-1690174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1689287-1689677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687198-1687591:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686471-1686592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1683813-1684924:-1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X4
translation: MEVAKGAACEEWNHHINGATHGRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPESKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTDATQKPESGTVEDKAKEEKQDDAAEPSGTKSSEQADQDEPSLLLESEDELLVDEEEAAALLESGSSAGDDADVANLTDVTAEEKKDPADDVTVKTEGNVVANPATKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAVKSAGKNDDSLAEIKVDKIEEPEQENETLENGTKSEDNLKAEAVEASDPTAAQDPEKNAHENMDTQEEQETKNVQEKALIPDEFRIGPYQPNVPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDYRQKKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: complement(join(1684874..1684924,1686471..1686592,1687198..1687591,1689287..1689677,1690131..1690174,1691094..1691225,1692412..1692582,1692792..1692917,1693458..1693583,1694041..1694093,1695091..1695194,1695514..1695555,1696286..1696347,1710346..1710375))
location: region:1684874-1710375:-1
so has part: feature:1710346-1710375:-1:exon
so has part: feature:1696286-1696347:-1:exon
so has part: feature:1695514-1695555:-1:exon
so has part: feature:1695091-1695194:-1:exon
so has part: feature:1694041-1694093:-1:exon
so has part: feature:1693458-1693583:-1:exon
so has part: feature:1692792-1692917:-1:exon
so has part: feature:1692412-1692582:-1:exon
so has part: feature:1691094-1691225:-1:exon
so has part: feature:1690131-1690174:-1:exon
so has part: feature:1689287-1689677:-1:exon
so has part: feature:1687198-1687591:-1:exon
so has part: feature:1686471-1686592:-1:exon
so has part: feature:1684874-1684924:-1:exon

XP_010717163.1
type: Protein
SIO_000068: ncbiprotein

position:1684874:-1
position: 1684874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710375:-1
position: 1710375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1710346-1710375:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1696286-1696347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695514-1695555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695091-1695194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694041-1694093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693458-1693583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1692792-1692917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692412-1692582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1691094-1691225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690131-1690174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1689287-1689677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687198-1687591:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686471-1686592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1684874-1684924:-1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X3
translation: MAAVEEWNHHINGATHGRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPESKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTDATQKPESGTVEDKAKEEKQDDAAEPSGTKSSEQADQDEPSLLLESEDELLVDEEEAAALLESGSSAGDDADVANLTDVTAEEKKDPADDVTVKTEGNVVANPATKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAVKSAGKNDDSLAEIKVDKIEEPEQENETLENGTKSEDNLKAEAVEASDPTAAQDPEKNAHENMDTQEEQETKNVQEKALIPDEFRIGPYQPNVPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDYRQKKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: complement(join(1684874..1684924,1686471..1686592,1687198..1687591,1689287..1689677,1690131..1690174,1691094..1691225,1692412..1692582,1692792..1692917,1693458..1693583,1694041..1694093,1695091..1695194,1695514..1695555,1696286..1696347,1706941..1706955))
location: region:1684874-1706955:-1
so has part: feature:1706941-1706955:-1:exon
so has part: feature:1696286-1696347:-1:exon
so has part: feature:1695514-1695555:-1:exon
so has part: feature:1695091-1695194:-1:exon
so has part: feature:1694041-1694093:-1:exon
so has part: feature:1693458-1693583:-1:exon
so has part: feature:1692792-1692917:-1:exon
so has part: feature:1692412-1692582:-1:exon
so has part: feature:1691094-1691225:-1:exon
so has part: feature:1690131-1690174:-1:exon
so has part: feature:1689287-1689677:-1:exon
so has part: feature:1687198-1687591:-1:exon
so has part: feature:1686471-1686592:-1:exon
so has part: feature:1684874-1684924:-1:exon

XP_019475886.2
type: Protein
SIO_000068: ncbiprotein

position:1706955:-1
position: 1706955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1706941-1706955:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1696286-1696347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695514-1695555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695091-1695194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694041-1694093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693458-1693583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1692792-1692917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692412-1692582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1691094-1691225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690131-1690174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1689287-1689677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687198-1687591:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686471-1686592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1684874-1684924:-1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X1
translation: MSKSFQQSSLSRDSQGHGRELSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHGRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPESKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTDATQKPESGTVEDKAKEEKQDDAAEPSGTKSSEQADQDEPSLLLESEDELLVDEEEAAALLESGSSAGDDADVANLTDVTAEEKKDPADDVTVKTEGNVVANPATKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAVKSAGKNDDSLAEIKVDKIEEPEQENETLENGTKSEDNLKAEAVEASDPTAAQDPEKNAHENMDTQEEQETKNVQEKALIPDEFRIGPYQPNVPVGVNYVVPKTGFYCKLCSLFYTNEDVAKKTHCSSLPHYQKLKKILDKMAEDYRQKKEA
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: complement(join(1684874..1684924,1686471..1686592,1687198..1687591,1689287..1689677,1690131..1690174,1691094..1691225,1692412..1692582,1692792..1692917,1693458..1693583,1694041..1694093,1695091..1695194,1695514..1695555,1696286..1696347,1700908..1701798))
location: region:1684874-1701798:-1
so has part: feature:1700908-1701798:-1:exon
so has part: feature:1696286-1696347:-1:exon
so has part: feature:1695514-1695555:-1:exon
so has part: feature:1695091-1695194:-1:exon
so has part: feature:1694041-1694093:-1:exon
so has part: feature:1693458-1693583:-1:exon
so has part: feature:1692792-1692917:-1:exon
so has part: feature:1692412-1692582:-1:exon
so has part: feature:1691094-1691225:-1:exon
so has part: feature:1690131-1690174:-1:exon
so has part: feature:1689287-1689677:-1:exon
so has part: feature:1687198-1687591:-1:exon
so has part: feature:1686471-1686592:-1:exon
so has part: feature:1684874-1684924:-1:exon

XP_010717161.1
type: Protein
SIO_000068: ncbiprotein

position:1701798:-1
position: 1701798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1700908-1701798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1696286-1696347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695514-1695555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695091-1695194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694041-1694093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693458-1693583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1692792-1692917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692412-1692582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1691094-1691225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690131-1690174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1689287-1689677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687198-1687591:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686471-1686592:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1684874-1684924:-1:exon

MATR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MATR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrin-3 isoform X2
translation: MSKSFQQSSLSRDSQGHGRELSAGIGLLAAATQSLNMPASLGRMNQGTARLASLMNLGMSSSLNQQGSHSALSSGSTSSHNLQSIFNIGSRGPLPLSSQHRGDADQATNILASFGLSARDLDELSRYPEDKITPENLPQILLQLKRRRAEEGYGRDGRSSTREPPYRVPRDDWEEKRHFRRDSFDDRGPSLNPVVDYDHGSRSQESGYYDRMDYEDDRLRDGERCRDESFYGETSHNYHKFDSEYDRMGRGPGPERSLFEKKRGAPPNSNIEDFHGFLPKGYPHLCSICDMPVHSNKEWNHHINGATHGRRCQLLLEIYPEWNPDSDSGHGMGDPFMLQQSTNPAPGILGPPPPPFHLGGPPVGPRGAGNGNMQGPRHMQKGRVETSRVVHIMDFQRGKNLRYQLLQLVEPFGIITNHLILNKINEAFIEMSTTEDAQAAVEYYSTTPALVFGKPVRVHLSQKYKRIKKPESKPDQKTEPPKPELGRVIHLSNLPHSGYSDNAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDALAMVEHCANKALWFQGRCVKVDLSEKYKKLVLRIPNKGVELLKKDKTRKRTYSPDSKDSPSDKKSKTDATQKPESGTVEDKAKEEKQDDAAEPSGTKSSEQADQDEPSLLLESEDELLVDEEEAAALLESGSSAGDDADVANLTDVTAEEKKDPADDVTVKTEGNVVANPATKKKLKKRYVGGFPRSMEGFVTLDEVGDEEDSDHQKLRKSGLAVKSAGKNDDSLAEIKVDKIEEPEQENETLENGTKSEDNLKAEAVEASDPTAAQDPEKNAHENMDTQEEQETKNVQEKALIPDEFRIGPYQPNVPVENSG
SIO_010081: MATR3
subclass of: SO_0000673
so part of: MATR3
location: complement(join(1684911..1684924,1687198..1687591,1689287..1689677,1690131..1690174,1691094..1691225,1692412..1692582,1692792..1692917,1693458..1693583,1694041..1694093,1695091..1695194,1695514..1695555,1696286..1696347,1700908..1701798))
location: region:1684911-1701798:-1
so has part: feature:1700908-1701798:-1:exon
so has part: feature:1696286-1696347:-1:exon
so has part: feature:1695514-1695555:-1:exon
so has part: feature:1695091-1695194:-1:exon
so has part: feature:1694041-1694093:-1:exon
so has part: feature:1693458-1693583:-1:exon
so has part: feature:1692792-1692917:-1:exon
so has part: feature:1692412-1692582:-1:exon
so has part: feature:1691094-1691225:-1:exon
so has part: feature:1690131-1690174:-1:exon
so has part: feature:1689287-1689677:-1:exon
so has part: feature:1687198-1687591:-1:exon
so has part: feature:1684911-1684924:-1:exon

XP_010717162.1
type: Protein
SIO_000068: ncbiprotein

position:1684911:-1
position: 1684911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1700908-1701798:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1696286-1696347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1695514-1695555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695091-1695194:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694041-1694093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693458-1693583:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1692792-1692917:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1692412-1692582:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1691094-1691225:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1690131-1690174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1689287-1689677:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1687198-1687591:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1684911-1684924:-1:exon

SIL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1724201..1785782
location: region:1724201-1785782:1
so has part: feature:1724201-1785782:1:exon
subclass of: SO_0000010

100550865
type: Gene
SIO_000068: ncbigene

position:1724201:1
position: 1724201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785782:1
position: 1785782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1724201-1785782:1:exon

SIL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SIL1
product: SIL1 nucleotide exchange factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_019620342.2
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: join(1724201..1724305,1727193..1727312,1745969..1746083,1749306..1749441,1773882..1774002,1775601..1775697,1777896..1778087,1782546..1782667,1785072..1785782)
location: region:1724201-1785782:1
so has part: feature:1724201-1724305:1:exon
so has part: feature:1727193-1727312:1:exon
so has part: feature:1745969-1746083:1:exon
so has part: feature:1749306-1749441:1:exon
so has part: feature:1773882-1774002:1:exon
so has part: feature:1775601-1775697:1:exon
so has part: feature:1777896-1778087:1:exon
so has part: feature:1782546-1782667:1:exon
so has part: feature:1785072-1785782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1724201-1724305:1:exon

position:1724305:1
position: 1724305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1727193-1727312:1:exon

position:1727193:1
position: 1727193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1727312:1
position: 1727312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1745969-1746083:1:exon

position:1745969:1
position: 1745969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1746083:1
position: 1746083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1749306-1749441:1:exon

position:1749306:1
position: 1749306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1749441:1
position: 1749441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1773882-1774002:1:exon

position:1773882:1
position: 1773882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1774002:1
position: 1774002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1775601-1775697:1:exon

position:1775601:1
position: 1775601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1775697:1
position: 1775697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1777896-1778087:1:exon

position:1777896:1
position: 1777896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1778087:1
position: 1778087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1782546-1782667:1:exon

position:1782546:1
position: 1782546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1782667:1
position: 1782667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1785072-1785782:1:exon

position:1785072:1
position: 1785072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SIL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SIL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleotide exchange factor SIL1
translation: MSHWTGLPCTVAKVNLLLLLLSAGFFWSSRSERVPEFALTKIEESDIKDDSGKEPITDDDADPEDLEVFYPTRQWQAVRPGQAVPAGSHVRLNLQTGEREARLPDSESGKSDTRGEKRRKRLNTMDIDTNSFTSQELKKALAKMKESEKAERMAHEEEVRKKFRPIEQLKEEFEKLNVKMETDYEIMDKLISKFNSSASTLDEKVAALYDLEYYVHQVDNAKDFLSMGGLRLVIEGLNSTEAVLKEHAAFVLGAALSRLGTFSLLSDLLQGEQELEISPRALVVVSLWIAAVGWVAVLPQAVTRAACLQSS
SIO_010081: SIL1
subclass of: SO_0000673
so part of: SIL1
location: join(1745979..1746083,1749306..1749441,1773882..1774002,1775601..1775697,1777896..1778087,1782546..1782667,1785072..1785234)
location: region:1745979-1785234:1
so has part: feature:1745979-1746083:1:exon
so has part: feature:1749306-1749441:1:exon
so has part: feature:1773882-1774002:1:exon
so has part: feature:1775601-1775697:1:exon
so has part: feature:1777896-1778087:1:exon
so has part: feature:1782546-1782667:1:exon
so has part: feature:1785072-1785234:1:exon

XP_019475887.1
type: Protein
SIO_000068: ncbiprotein

position:1745979:1
position: 1745979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1785234:1
position: 1785234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1745979-1746083:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1749306-1749441:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1773882-1774002:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1775601-1775697:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1777896-1778087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1782546-1782667:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1785072-1785234:1:exon

LOC109370040
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370040
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1795003..1810131
location: region:1795003-1810131:1
so has part: feature:1795003-1810131:1:exon
subclass of: SO_0000011

109370040
type: Gene
SIO_000068: ncbigene

position:1795003:1
position: 1795003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1810131:1
position: 1810131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1795003-1810131:1:exon

LOC109370040
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370040
product: uncharacterized LOC109370040
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002119792.2
SIO_010081: LOC109370040
subclass of: SO_0000673
so part of: LOC109370040
location: join(1795003..1795145,1795259..1795368,1810037..1810131)
location: region:1795003-1810131:1
so has part: feature:1795003-1795145:1:exon
so has part: feature:1795259-1795368:1:exon
so has part: feature:1810037-1810131:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1795003-1795145:1:exon

position:1795145:1
position: 1795145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1795259-1795368:1:exon

position:1795259:1
position: 1795259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795368:1
position: 1795368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1810037-1810131:1:exon

position:1810037:1
position: 1810037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CTNNA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1813438..1904025)
location: region:1813438-1904025:-1
so has part: feature:1813438-1904025:-1:exon
subclass of: SO_0000010

100550456
type: Gene
SIO_000068: ncbigene

position:1813438:-1
position: 1813438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1904025:-1
position: 1904025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1813438-1904025:-1:exon

CTNNA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CTNNA1
product: catenin alpha 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010718865.1
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: complement(join(1813438..1813965,1817550..1817655,1818418..1818599,1820335..1820445,1823057..1823208,1824251..1824451,1829643..1829799,1839110..1839202,1852496..1852648,1853432..1853512,1888386..1888589,1891211..1891477,1893540..1893659,1894414..1894580,1901510..1901705,1903919..1904025))
location: region:1813438-1904025:-1
so has part: feature:1903919-1904025:-1:exon
so has part: feature:1901510-1901705:-1:exon
so has part: feature:1894414-1894580:-1:exon
so has part: feature:1893540-1893659:-1:exon
so has part: feature:1891211-1891477:-1:exon
so has part: feature:1888386-1888589:-1:exon
so has part: feature:1853432-1853512:-1:exon
so has part: feature:1852496-1852648:-1:exon
so has part: feature:1839110-1839202:-1:exon
so has part: feature:1829643-1829799:-1:exon
so has part: feature:1824251-1824451:-1:exon
so has part: feature:1823057-1823208:-1:exon
so has part: feature:1820335-1820445:-1:exon
so has part: feature:1818418-1818599:-1:exon
so has part: feature:1817550-1817655:-1:exon
so has part: feature:1813438-1813965:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1903919-1904025:-1:exon

position:1903919:-1
position: 1903919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1901510-1901705:-1:exon

position:1901510:-1
position: 1901510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1901705:-1
position: 1901705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1894414-1894580:-1:exon

position:1894414:-1
position: 1894414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1894580:-1
position: 1894580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1893540-1893659:-1:exon

position:1893540:-1
position: 1893540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1893659:-1
position: 1893659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1891211-1891477:-1:exon

position:1891211:-1
position: 1891211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1891477:-1
position: 1891477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1888386-1888589:-1:exon

position:1888386:-1
position: 1888386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1888589:-1
position: 1888589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1853432-1853512:-1:exon

position:1853432:-1
position: 1853432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853512:-1
position: 1853512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1852496-1852648:-1:exon

position:1852496:-1
position: 1852496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852648:-1
position: 1852648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1839110-1839202:-1:exon

position:1839110:-1
position: 1839110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839202:-1
position: 1839202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1829643-1829799:-1:exon

position:1829643:-1
position: 1829643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1829799:-1
position: 1829799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1824251-1824451:-1:exon

position:1824251:-1
position: 1824251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1824451:-1
position: 1824451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1823057-1823208:-1:exon

position:1823057:-1
position: 1823057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823208:-1
position: 1823208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1820335-1820445:-1:exon

position:1820335:-1
position: 1820335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1820445:-1
position: 1820445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1818418-1818599:-1:exon

position:1818418:-1
position: 1818418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1818599:-1
position: 1818599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1817550-1817655:-1:exon

position:1817550:-1
position: 1817550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817655:-1
position: 1817655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1813438-1813965:-1:exon

position:1813965:-1
position: 1813965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CTNNA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CTNNA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: catenin alpha-1
translation: MTAVTAGNVNFRWDPKSLEIRTLAVERLLEPLVTQVTTLVNTSNKGPSNKKRGRSKKAHVLAASVEQATENFLDKGDKIAKESQFLKEELVAAVEDVRKQGDLMKSASGEFADDPCSSVKRGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEEGILKLRNAGTEQDLGIQYKALKPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAAQATASDDAAQQQGGGGELAYALNNFDKQIIVDPSTFSEERFRPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERSDALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQVFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMELFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSIQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSGVRRGVALHGSFPRGSNCSLMFERRKIIEGERNASLFHTQQCLRTGSRYLHAICHCSRWYFTIRKVKSLQSAQLNPPVYLQSPGARGACNAPRAANISEQPCPEQCRDLMSSELCPGLPCCPAAIA
SIO_010081: CTNNA1
subclass of: SO_0000673
so part of: CTNNA1
location: complement(join(1813453..1813965,1817550..1817655,1818418..1818599,1820335..1820445,1823057..1823208,1824251..1824451,1829643..1829799,1839110..1839202,1852496..1852648,1853432..1853512,1888386..1888589,1891211..1891477,1893540..1893659,1894414..1894580,1901510..1901705,1903919..1904023))
location: region:1813453-1904023:-1
so has part: feature:1903919-1904023:-1:exon
so has part: feature:1901510-1901705:-1:exon
so has part: feature:1894414-1894580:-1:exon
so has part: feature:1893540-1893659:-1:exon
so has part: feature:1891211-1891477:-1:exon
so has part: feature:1888386-1888589:-1:exon
so has part: feature:1853432-1853512:-1:exon
so has part: feature:1852496-1852648:-1:exon
so has part: feature:1839110-1839202:-1:exon
so has part: feature:1829643-1829799:-1:exon
so has part: feature:1824251-1824451:-1:exon
so has part: feature:1823057-1823208:-1:exon
so has part: feature:1820335-1820445:-1:exon
so has part: feature:1818418-1818599:-1:exon
so has part: feature:1817550-1817655:-1:exon
so has part: feature:1813453-1813965:-1:exon

XP_010717167.1
type: Protein
SIO_000068: ncbiprotein

position:1813453:-1
position: 1813453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1904023:-1
position: 1904023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1903919-1904023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1901510-1901705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1894414-1894580:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1893540-1893659:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1891211-1891477:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1888386-1888589:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1853432-1853512:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1852496-1852648:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1839110-1839202:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1829643-1829799:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1824251-1824451:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1823057-1823208:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1820335-1820445:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1818418-1818599:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1817550-1817655:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1813453-1813965:-1:exon

LRRTM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1860543..1864428
location: region:1860543-1864428:1
so has part: feature:1860543-1864428:1:exon
subclass of: SO_0000010

104913239
type: Gene
SIO_000068: ncbigene

position:1860543:1
position: 1860543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864428:1
position: 1864428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1860543-1864428:1:exon

LRRTM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LRRTM2
product: leucine rich repeat transmembrane neuronal 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_010718863.3
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: join(1860543..1861413,1861747..1864428)
location: region:1860543-1864428:1
so has part: feature:1860543-1861413:1:exon
so has part: feature:1861747-1864428:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1860543-1861413:1:exon

position:1861413:1
position: 1861413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1861747-1864428:1:exon

position:1861747:1
position: 1861747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRTM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LRRTM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat transmembrane neuronal protein 2
translation: MGLHFKWPLGARMLAALYAMSMVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSVPNTTEKGSLGLSLRHNFITELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNKIFHLPNTTFSQLLNLQNLDLSFNQLSSLHPELLYGLRKLQTLHLRSNSLRTIPVRLFWDCRSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNKISNLTCGMEWTWGTLEKLDLTGNEIKAIDLTVFETMPNLKTLLLDNNKLSTLDSKILRSLPSLSTVGLSGNLWECSARICALAAWLGTFRGRWEHPILCHGPDHAQGEDILDAVHGFQLCWNASTAAPSAAPTDAPTTEYTKGISSSHFHMGDKEIPTTAGMVVTTEEPFPEPNNAIFTQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMANMSDQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV
SIO_010081: LRRTM2
subclass of: SO_0000673
so part of: LRRTM2
location: join(1861410..1861413,1861747..1863290)
location: region:1861410-1863290:1
so has part: feature:1861410-1861413:1:exon
so has part: feature:1861747-1863290:1:exon

XP_010717165.1
type: Protein
SIO_000068: ncbiprotein

position:1861410:1
position: 1861410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863290:1
position: 1863290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1861410-1861413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1861747-1863290:1:exon

HSPA9
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HSPA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1983630..2004216
location: region:1983630-2004216:1
so has part: feature:1983630-2004216:1:exon
subclass of: SO_0000010

100551017
type: Gene
SIO_000068: ncbigene

position:1983630:1
position: 1983630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2004216:1
position: 2004216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1983630-2004216:1:exon

HSPA9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HSPA9
product: heat shock protein family A (Hsp70) member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010718866.3
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: join(1983630..1983730,1985041..1985128,1985227..1985408,1985938..1986062,1987512..1987585,1987690..1987796,1988609..1988771,1989793..1989885,1991468..1991677,1993981..1994208,1994964..1995068,1996147..1996264,1997834..1997928,2000784..2000876,2002511..2002651,2003474..2004216)
location: region:1983630-2004216:1
so has part: feature:1983630-1983730:1:exon
so has part: feature:1985041-1985128:1:exon
so has part: feature:1985227-1985408:1:exon
so has part: feature:1985938-1986062:1:exon
so has part: feature:1987512-1987585:1:exon
so has part: feature:1987690-1987796:1:exon
so has part: feature:1988609-1988771:1:exon
so has part: feature:1989793-1989885:1:exon
so has part: feature:1991468-1991677:1:exon
so has part: feature:1993981-1994208:1:exon
so has part: feature:1994964-1995068:1:exon
so has part: feature:1996147-1996264:1:exon
so has part: feature:1997834-1997928:1:exon
so has part: feature:2000784-2000876:1:exon
so has part: feature:2002511-2002651:1:exon
so has part: feature:2003474-2004216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1983630-1983730:1:exon

position:1983730:1
position: 1983730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1985041-1985128:1:exon

position:1985041:1
position: 1985041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985128:1
position: 1985128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1985227-1985408:1:exon

position:1985227:1
position: 1985227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1985408:1
position: 1985408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1985938-1986062:1:exon

position:1985938:1
position: 1985938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1986062:1
position: 1986062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1987512-1987585:1:exon

position:1987512:1
position: 1987512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1987585:1
position: 1987585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1987690-1987796:1:exon

position:1987690:1
position: 1987690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1987796:1
position: 1987796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1988609-1988771:1:exon

position:1988609:1
position: 1988609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1988771:1
position: 1988771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1989793-1989885:1:exon

position:1989793:1
position: 1989793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1989885:1
position: 1989885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1991468-1991677:1:exon

position:1991468:1
position: 1991468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991677:1
position: 1991677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1993981-1994208:1:exon

position:1993981:1
position: 1993981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994208:1
position: 1994208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1994964-1995068:1:exon

position:1994964:1
position: 1994964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1995068:1
position: 1995068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1996147-1996264:1:exon

position:1996147:1
position: 1996147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1996264:1
position: 1996264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1997834-1997928:1:exon

position:1997834:1
position: 1997834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1997928:1
position: 1997928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2000784-2000876:1:exon

position:2000784:1
position: 2000784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2000876:1
position: 2000876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2002511-2002651:1:exon

position:2002511:1
position: 2002511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2002651:1
position: 2002651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2003474-2004216:1:exon

position:2003474:1
position: 2003474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HSPA9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HSPA9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stress-70 protein, mitochondrial
translation: MEGKQAKVLENSEGARTTPSVVAFTADGERLVGMPAKRQAVTNPHNTFYATKRLIGRRFDDSEVKKDIKNVPFKIVRASNGDAWVEAHGKLYSPSQIGAFVLMKMKETAENYLGHPAKNAVITVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKSEDKIIAVYDLGGGTFDISILEIQKGVFEVKSTNGDTFLGGEDFDQALLQYIVKEFKRETGVDLTKDNMALQRVREASEKAKCELSSSVQTDINLPYLTMDASGPKHLNMKLSRSQFEGIVADLIKRTVAPCQKAMQDAEVSKSDIGEVILVGGMTRMPKVQQTVQDLFGRAPSKAVNPDEAVAIGAAIQGGVLAGDVTDVLLLDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMASDNKLLGQFTLVGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDEIENMVKNAEKYAEEDRRRKERVEAVNLAEGIIHDTESKMEEFKDQLPADECNKLKEEIAKMRELLARKDTETGENIRQAATSLQQASLKLFEMAYKKMASERESSGSSGDQKEEKQ
SIO_010081: HSPA9
subclass of: SO_0000673
so part of: HSPA9
location: join(1985108..1985128,1985227..1985408,1985938..1986062,1987512..1987585,1987690..1987796,1988609..1988771,1989793..1989885,1991468..1991677,1993981..1994208,1994964..1995068,1996147..1996264,1997834..1997928,2000784..2000876,2002511..2002651,2003474..2003533)
location: region:1985108-2003533:1
so has part: feature:1985108-1985128:1:exon
so has part: feature:1985227-1985408:1:exon
so has part: feature:1985938-1986062:1:exon
so has part: feature:1987512-1987585:1:exon
so has part: feature:1987690-1987796:1:exon
so has part: feature:1988609-1988771:1:exon
so has part: feature:1989793-1989885:1:exon
so has part: feature:1991468-1991677:1:exon
so has part: feature:1993981-1994208:1:exon
so has part: feature:1994964-1995068:1:exon
so has part: feature:1996147-1996264:1:exon
so has part: feature:1997834-1997928:1:exon
so has part: feature:2000784-2000876:1:exon
so has part: feature:2002511-2002651:1:exon
so has part: feature:2003474-2003533:1:exon

XP_010717168.1
type: Protein
SIO_000068: ncbiprotein

position:1985108:1
position: 1985108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2003533:1
position: 2003533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1985108-1985128:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1985227-1985408:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1985938-1986062:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1987512-1987585:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1987690-1987796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1988609-1988771:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1989793-1989885:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1991468-1991677:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1993981-1994208:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1994964-1995068:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1996147-1996264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1997834-1997928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2000784-2000876:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2002511-2002651:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2003474-2003533:1:exon

LOC116217226
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217226
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1994454..1994523
location: region:1994454-1994523:1
so has part: feature:1994454-1994523:1:exon
subclass of: SO_0000578

116217226
type: Gene
SIO_000068: ncbigene

position:1994454:1
position: 1994454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994523:1
position: 1994523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1994454-1994523:1:exon

LOC116217226
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217226
product: small nucleolar RNA SNORD63
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00154
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161459.1
SIO_010081: LOC116217226
subclass of: SO_0000673
so part of: LOC116217226
location: 1994454..1994523
location: region:1994454-1994523:1
so has part: feature:1994454-1994523:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1994454-1994523:1:exon

ETF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2014899..2032057
location: region:2014899-2032057:1
so has part: feature:2014899-2032057:1:exon
subclass of: SO_0000010

100550710
type: Gene
SIO_000068: ncbigene

position:2014899:1
position: 2014899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2032057:1
position: 2032057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2014899-2032057:1:exon

ETF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ETF1
product: eukaryotic translation termination factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_003210253.4
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: join(2014899..2014985,2019926..2020101,2020841..2020980,2024051..2024189,2025007..2025197,2025506..2025635,2026365..2026520,2027151..2027215,2028413..2028560,2029974..2032057)
location: region:2014899-2032057:1
so has part: feature:2014899-2014985:1:exon
so has part: feature:2019926-2020101:1:exon
so has part: feature:2020841-2020980:1:exon
so has part: feature:2024051-2024189:1:exon
so has part: feature:2025007-2025197:1:exon
so has part: feature:2025506-2025635:1:exon
so has part: feature:2026365-2026520:1:exon
so has part: feature:2027151-2027215:1:exon
so has part: feature:2028413-2028560:1:exon
so has part: feature:2029974-2032057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2014899-2014985:1:exon

position:2014985:1
position: 2014985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2019926-2020101:1:exon

position:2019926:1
position: 2019926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2020101:1
position: 2020101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2020841-2020980:1:exon

position:2020841:1
position: 2020841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2020980:1
position: 2020980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2024051-2024189:1:exon

position:2024051:1
position: 2024051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2024189:1
position: 2024189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2025007-2025197:1:exon

position:2025007:1
position: 2025007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025197:1
position: 2025197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2025506-2025635:1:exon

position:2025506:1
position: 2025506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025635:1
position: 2025635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2026365-2026520:1:exon

position:2026365:1
position: 2026365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026520:1
position: 2026520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2027151-2027215:1:exon

position:2027151:1
position: 2027151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2027215:1
position: 2027215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2028413-2028560:1:exon

position:2028413:1
position: 2028413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2028560:1
position: 2028560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2029974-2032057:1:exon

position:2029974:1
position: 2029974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ETF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ETF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic peptide chain release factor subunit 1
translation: MCNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDDY
SIO_010081: ETF1
subclass of: SO_0000673
so part of: ETF1
location: join(2014981..2014985,2019926..2020101,2020841..2020980,2024051..2024189,2025007..2025197,2025506..2025635,2026365..2026520,2027151..2027215,2028413..2028560,2029974..2030056)
location: region:2014981-2030056:1
so has part: feature:2014981-2014985:1:exon
so has part: feature:2019926-2020101:1:exon
so has part: feature:2020841-2020980:1:exon
so has part: feature:2024051-2024189:1:exon
so has part: feature:2025007-2025197:1:exon
so has part: feature:2025506-2025635:1:exon
so has part: feature:2026365-2026520:1:exon
so has part: feature:2027151-2027215:1:exon
so has part: feature:2028413-2028560:1:exon
so has part: feature:2029974-2030056:1:exon

XP_003210301.1
type: Protein
SIO_000068: ncbiprotein

position:2014981:1
position: 2014981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2030056:1
position: 2030056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2014981-2014985:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2019926-2020101:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2020841-2020980:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2024051-2024189:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2025007-2025197:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2025506-2025635:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2026365-2026520:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2027151-2027215:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2028413-2028560:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2029974-2030056:1:exon

FBXW11
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2047267..2106765
location: region:2047267-2106765:1
so has part: feature:2047267-2106765:1:exon
subclass of: SO_0000010

100551173
type: Gene
SIO_000068: ncbigene

position:2047267:1
position: 2047267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2106765:1
position: 2106765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2047267-2106765:1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 214 samples with support for all annotated introns
transcript id: XM_010718870.3
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: join(2047267..2047357,2071773..2071835,2072883..2073108,2083272..2083458,2083968..2084058,2093875..2094012,2095085..2095203,2096181..2096430,2097575..2097693,2098211..2098321,2099371..2099449,2100801..2100989,2104333..2106765)
location: region:2047267-2106765:1
so has part: feature:2047267-2047357:1:exon
so has part: feature:2071773-2071835:1:exon
so has part: feature:2072883-2073108:1:exon
so has part: feature:2083272-2083458:1:exon
so has part: feature:2083968-2084058:1:exon
so has part: feature:2093875-2094012:1:exon
so has part: feature:2095085-2095203:1:exon
so has part: feature:2096181-2096430:1:exon
so has part: feature:2097575-2097693:1:exon
so has part: feature:2098211-2098321:1:exon
so has part: feature:2099371-2099449:1:exon
so has part: feature:2100801-2100989:1:exon
so has part: feature:2104333-2106765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2047267-2047357:1:exon

position:2047357:1
position: 2047357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2071773-2071835:1:exon

position:2071773:1
position: 2071773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071835:1
position: 2071835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2072883-2073108:1:exon

position:2072883:1
position: 2072883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2073108:1
position: 2073108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2083272-2083458:1:exon

position:2083272:1
position: 2083272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2083458:1
position: 2083458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2083968-2084058:1:exon

position:2083968:1
position: 2083968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2084058:1
position: 2084058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2093875-2094012:1:exon

position:2093875:1
position: 2093875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2094012:1
position: 2094012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2095085-2095203:1:exon

position:2095085:1
position: 2095085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2095203:1
position: 2095203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2096181-2096430:1:exon

position:2096181:1
position: 2096181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096430:1
position: 2096430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2097575-2097693:1:exon

position:2097575:1
position: 2097575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2097693:1
position: 2097693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2098211-2098321:1:exon

position:2098211:1
position: 2098211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098321:1
position: 2098321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2099371-2099449:1:exon

position:2099371:1
position: 2099371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2099449:1
position: 2099449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2100801-2100989:1:exon

position:2100801:1
position: 2100801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2100989:1
position: 2100989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2104333-2106765:1:exon

position:2104333:1
position: 2104333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010718868.3
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: join(2047276..2047357,2049802..2049910,2054555..2054656,2071773..2071835,2072883..2073108,2083272..2083458,2083968..2084058,2093875..2094012,2095085..2095203,2096181..2096430,2097575..2097693,2098211..2098321,2099371..2099449,2100801..2100989,2104333..2106765)
location: region:2047276-2106765:1
so has part: feature:2047276-2047357:1:exon
so has part: feature:2049802-2049910:1:exon
so has part: feature:2054555-2054656:1:exon
so has part: feature:2071773-2071835:1:exon
so has part: feature:2072883-2073108:1:exon
so has part: feature:2083272-2083458:1:exon
so has part: feature:2083968-2084058:1:exon
so has part: feature:2093875-2094012:1:exon
so has part: feature:2095085-2095203:1:exon
so has part: feature:2096181-2096430:1:exon
so has part: feature:2097575-2097693:1:exon
so has part: feature:2098211-2098321:1:exon
so has part: feature:2099371-2099449:1:exon
so has part: feature:2100801-2100989:1:exon
so has part: feature:2104333-2106765:1:exon

position:2047276:1
position: 2047276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2047276-2047357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2049802-2049910:1:exon

position:2049802:1
position: 2049802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2049910:1
position: 2049910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2054555-2054656:1:exon

position:2054555:1
position: 2054555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2054656:1
position: 2054656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2071773-2071835:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2072883-2073108:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2083272-2083458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2083968-2084058:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2093875-2094012:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2095085-2095203:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2096181-2096430:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2097575-2097693:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2098211-2098321:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2099371-2099449:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2100801-2100989:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2104333-2106765:1:exon

FBXW11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FBXW11
product: F-box and WD repeat domain containing 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_010718871.3
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: join(2047276..2047357,2049802..2049910,2071773..2071835,2072883..2073108,2083272..2083458,2083968..2084058,2093875..2094012,2095085..2095203,2096181..2096430,2097575..2097693,2098211..2098321,2099371..2099449,2100801..2100989,2104333..2106765)
location: region:2047276-2106765:1
so has part: feature:2047276-2047357:1:exon
so has part: feature:2049802-2049910:1:exon
so has part: feature:2071773-2071835:1:exon
so has part: feature:2072883-2073108:1:exon
so has part: feature:2083272-2083458:1:exon
so has part: feature:2083968-2084058:1:exon
so has part: feature:2093875-2094012:1:exon
so has part: feature:2095085-2095203:1:exon
so has part: feature:2096181-2096430:1:exon
so has part: feature:2097575-2097693:1:exon
so has part: feature:2098211-2098321:1:exon
so has part: feature:2099371-2099449:1:exon
so has part: feature:2100801-2100989:1:exon
so has part: feature:2104333-2106765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2047276-2047357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2049802-2049910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2071773-2071835:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2072883-2073108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2083272-2083458:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2083968-2084058:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2093875-2094012:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2095085-2095203:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2096181-2096430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2097575-2097693:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2098211-2098321:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2099371-2099449:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2100801-2100989:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2104333-2106765:1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X1
translation: MCALRCLQSMPSVRCLQNTSVMEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRCWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAPNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: join(2054606..2054656,2071773..2071835,2072883..2073108,2083272..2083458,2083968..2084058,2093875..2094012,2095085..2095203,2096181..2096430,2097575..2097693,2098211..2098321,2099371..2099449,2100801..2100962)
location: region:2054606-2100962:1
so has part: feature:2054606-2054656:1:exon
so has part: feature:2071773-2071835:1:exon
so has part: feature:2072883-2073108:1:exon
so has part: feature:2083272-2083458:1:exon
so has part: feature:2083968-2084058:1:exon
so has part: feature:2093875-2094012:1:exon
so has part: feature:2095085-2095203:1:exon
so has part: feature:2096181-2096430:1:exon
so has part: feature:2097575-2097693:1:exon
so has part: feature:2098211-2098321:1:exon
so has part: feature:2099371-2099449:1:exon
so has part: feature:2100801-2100962:1:exon

XP_010717170.1
type: Protein
SIO_000068: ncbiprotein

position:2054606:1
position: 2054606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2100962:1
position: 2100962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2054606-2054656:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2071773-2071835:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2072883-2073108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2083272-2083458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2083968-2084058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2093875-2094012:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2095085-2095203:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2096181-2096430:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2097575-2097693:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2098211-2098321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2099371-2099449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2100801-2100962:1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X2
translation: MEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRCWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAPNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: join(2071785..2071835,2072883..2073108,2083272..2083458,2083968..2084058,2093875..2094012,2095085..2095203,2096181..2096430,2097575..2097693,2098211..2098321,2099371..2099449,2100801..2100962)
location: region:2071785-2100962:1
so has part: feature:2071785-2071835:1:exon
so has part: feature:2072883-2073108:1:exon
so has part: feature:2083272-2083458:1:exon
so has part: feature:2083968-2084058:1:exon
so has part: feature:2093875-2094012:1:exon
so has part: feature:2095085-2095203:1:exon
so has part: feature:2096181-2096430:1:exon
so has part: feature:2097575-2097693:1:exon
so has part: feature:2098211-2098321:1:exon
so has part: feature:2099371-2099449:1:exon
so has part: feature:2100801-2100962:1:exon

XP_010717172.1
type: Protein
SIO_000068: ncbiprotein

position:2071785:1
position: 2071785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2071785-2071835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2072883-2073108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2083272-2083458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2083968-2084058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2093875-2094012:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2095085-2095203:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2096181-2096430:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2097575-2097693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2098211-2098321:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2099371-2099449:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2100801-2100962:1:exon

FBXW11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FBXW11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box/WD repeat-containing protein 11 isoform X2
translation: MEDQNEDESPKKNTLWQISNGTSSVIVSRKRPSEGNYEKEKDLCIKYFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPEQGLDHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERRCWDQYLFKNRPTDGPPNSFYRSLYPKIIQDIETIESNWRCGRHNLQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFLNVPPSAPNETRSPSRTYTYISR
SIO_010081: FBXW11
subclass of: SO_0000673
so part of: FBXW11
location: join(2071785..2071835,2072883..2073108,2083272..2083458,2083968..2084058,2093875..2094012,2095085..2095203,2096181..2096430,2097575..2097693,2098211..2098321,2099371..2099449,2100801..2100962)
location: region:2071785-2100962:1
so has part: feature:2071785-2071835:1:exon
so has part: feature:2072883-2073108:1:exon
so has part: feature:2083272-2083458:1:exon
so has part: feature:2083968-2084058:1:exon
so has part: feature:2093875-2094012:1:exon
so has part: feature:2095085-2095203:1:exon
so has part: feature:2096181-2096430:1:exon
so has part: feature:2097575-2097693:1:exon
so has part: feature:2098211-2098321:1:exon
so has part: feature:2099371-2099449:1:exon
so has part: feature:2100801-2100962:1:exon

XP_010717173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2071785-2071835:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2072883-2073108:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2083272-2083458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2083968-2084058:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2093875-2094012:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2095085-2095203:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2096181-2096430:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2097575-2097693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2098211-2098321:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2099371-2099449:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2100801-2100962:1:exon

LOC116217202
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217202
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2150315..2195641
location: region:2150315-2195641:1
so has part: feature:2150315-2195641:1:exon
subclass of: SO_0000011

116217202
type: Gene
SIO_000068: ncbigene

position:2150315:1
position: 2150315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2195641:1
position: 2195641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2150315-2195641:1:exon

LOC116217202
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217202
product: uncharacterized LOC116217202, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161381.1
SIO_010081: LOC116217202
subclass of: SO_0000673
so part of: LOC116217202
location: join(2150315..2151030,2167157..2167290,2190341..2191711,2193098..2193162,2194443..2194565,2194692..2195641)
location: region:2150315-2195641:1
so has part: feature:2150315-2151030:1:exon
so has part: feature:2167157-2167290:1:exon
so has part: feature:2190341-2191711:1:exon
so has part: feature:2193098-2193162:1:exon
so has part: feature:2194443-2194565:1:exon
so has part: feature:2194692-2195641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2150315-2151030:1:exon

position:2151030:1
position: 2151030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2167157-2167290:1:exon

position:2167157:1
position: 2167157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2167290:1
position: 2167290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2190341-2191711:1:exon

position:2190341:1
position: 2190341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2191711:1
position: 2191711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2193098-2193162:1:exon

position:2193098:1
position: 2193098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2193162:1
position: 2193162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2194443-2194565:1:exon

position:2194443:1
position: 2194443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2194565:1
position: 2194565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2194692-2195641:1:exon

position:2194692:1
position: 2194692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217202
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217202
product: uncharacterized LOC116217202, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161380.1
SIO_010081: LOC116217202
subclass of: SO_0000673
so part of: LOC116217202
location: join(2184035..2186036,2190341..2191711,2193098..2193162,2194443..2194565,2194692..2195641)
location: region:2184035-2195641:1
so has part: feature:2184035-2186036:1:exon
so has part: feature:2190341-2191711:1:exon
so has part: feature:2193098-2193162:1:exon
so has part: feature:2194443-2194565:1:exon
so has part: feature:2194692-2195641:1:exon

position:2184035:1
position: 2184035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2184035-2186036:1:exon

position:2186036:1
position: 2186036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2190341-2191711:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2193098-2193162:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2194443-2194565:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2194692-2195641:1:exon

LOC116217203
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217203
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2195666..2199769
location: region:2195666-2199769:1
so has part: feature:2195666-2199769:1:exon
subclass of: SO_0000011

116217203
type: Gene
SIO_000068: ncbigene

position:2195666:1
position: 2195666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2199769:1
position: 2199769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2195666-2199769:1:exon

LOC116217203
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217203
product: uncharacterized LOC116217203
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004161382.1
SIO_010081: LOC116217203
subclass of: SO_0000673
so part of: LOC116217203
location: join(2195666..2196157,2198893..2199021,2199711..2199769)
location: region:2195666-2199769:1
so has part: feature:2195666-2196157:1:exon
so has part: feature:2198893-2199021:1:exon
so has part: feature:2199711-2199769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2195666-2196157:1:exon

position:2196157:1
position: 2196157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2198893-2199021:1:exon

position:2198893:1
position: 2198893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2199021:1
position: 2199021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2199711-2199769:1:exon

position:2199711:1
position: 2199711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109370042
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109370042
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2201661..2204380)
location: region:2201661-2204380:-1
so has part: feature:2201661-2204380:-1:exon
subclass of: SO_0000011

109370042
type: Gene
SIO_000068: ncbigene

position:2201661:-1
position: 2201661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2204380:-1
position: 2204380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2201661-2204380:-1:exon

LOC109370042
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109370042
product: uncharacterized LOC109370042
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002119797.1
SIO_010081: LOC109370042
subclass of: SO_0000673
so part of: LOC109370042
location: complement(join(2201661..2202077,2202959..2203031,2204304..2204380))
location: region:2201661-2204380:-1
so has part: feature:2204304-2204380:-1:exon
so has part: feature:2202959-2203031:-1:exon
so has part: feature:2201661-2202077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2204304-2204380:-1:exon

position:2204304:-1
position: 2204304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2202959-2203031:-1:exon

position:2202959:-1
position: 2202959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2203031:-1
position: 2203031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2201661-2202077:-1:exon

position:2202077:-1
position: 2202077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913242
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2204422..2246419
location: region:2204422-2246419:1
so has part: feature:2204422-2246419:1:exon
subclass of: SO_0000011

104913242
type: Gene
SIO_000068: ncbigene

position:2204422:1
position: 2204422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2246419:1
position: 2246419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204422-2246419:1:exon

LOC104913242
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913242
product: uncharacterized LOC104913242, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004161384.1
SIO_010081: LOC104913242
subclass of: SO_0000673
so part of: LOC104913242
location: join(2204422..2204495,2206492..2206588,2206997..2207069,2208154..2208278,2209114..2209174,2210075..2210123,2210889..2212724,2214974..2215139,2215311..2215497,2216670..2216793,2225041..2225133,2225755..2225878,2228258..2228367,2241913..2243978)
location: region:2204422-2243978:1
so has part: feature:2204422-2204495:1:exon
so has part: feature:2206492-2206588:1:exon
so has part: feature:2206997-2207069:1:exon
so has part: feature:2208154-2208278:1:exon
so has part: feature:2209114-2209174:1:exon
so has part: feature:2210075-2210123:1:exon
so has part: feature:2210889-2212724:1:exon
so has part: feature:2214974-2215139:1:exon
so has part: feature:2215311-2215497:1:exon
so has part: feature:2216670-2216793:1:exon
so has part: feature:2225041-2225133:1:exon
so has part: feature:2225755-2225878:1:exon
so has part: feature:2228258-2228367:1:exon
so has part: feature:2241913-2243978:1:exon

position:2243978:1
position: 2243978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204422-2204495:1:exon

position:2204495:1
position: 2204495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2206492-2206588:1:exon

position:2206492:1
position: 2206492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2206588:1
position: 2206588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2206997-2207069:1:exon

position:2206997:1
position: 2206997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2207069:1
position: 2207069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2208154-2208278:1:exon

position:2208154:1
position: 2208154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2208278:1
position: 2208278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2209114-2209174:1:exon

position:2209114:1
position: 2209114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2209174:1
position: 2209174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2210075-2210123:1:exon

position:2210075:1
position: 2210075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2210123:1
position: 2210123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2210889-2212724:1:exon

position:2210889:1
position: 2210889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2212724:1
position: 2212724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2214974-2215139:1:exon

position:2214974:1
position: 2214974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2215139:1
position: 2215139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2215311-2215497:1:exon

position:2215311:1
position: 2215311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2215497:1
position: 2215497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2216670-2216793:1:exon

position:2216670:1
position: 2216670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2216793:1
position: 2216793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2225041-2225133:1:exon

position:2225041:1
position: 2225041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2225133:1
position: 2225133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2225755-2225878:1:exon

position:2225755:1
position: 2225755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2225878:1
position: 2225878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2228258-2228367:1:exon

position:2228258:1
position: 2228258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2228367:1
position: 2228367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2241913-2243978:1:exon

position:2241913:1
position: 2241913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913242
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913242
product: uncharacterized LOC104913242, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004161386.1
SIO_010081: LOC104913242
subclass of: SO_0000673
so part of: LOC104913242
location: join(2204512..2206588,2206997..2207069,2208154..2208278,2209114..2209174,2210075..2210123,2210889..2212724,2214974..2215139,2215311..2215497,2216670..2216793,2225041..2225133,2225755..2225878,2227113..2227223,2228258..2228367,2241913..2243978)
location: region:2204512-2243978:1
so has part: feature:2204512-2206588:1:exon
so has part: feature:2206997-2207069:1:exon
so has part: feature:2208154-2208278:1:exon
so has part: feature:2209114-2209174:1:exon
so has part: feature:2210075-2210123:1:exon
so has part: feature:2210889-2212724:1:exon
so has part: feature:2214974-2215139:1:exon
so has part: feature:2215311-2215497:1:exon
so has part: feature:2216670-2216793:1:exon
so has part: feature:2225041-2225133:1:exon
so has part: feature:2225755-2225878:1:exon
so has part: feature:2227113-2227223:1:exon
so has part: feature:2228258-2228367:1:exon
so has part: feature:2241913-2243978:1:exon

position:2204512:1
position: 2204512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204512-2206588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2206997-2207069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2208154-2208278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2209114-2209174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2210075-2210123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2210889-2212724:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2214974-2215139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2215311-2215497:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2216670-2216793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2225041-2225133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2225755-2225878:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2227113-2227223:1:exon

position:2227113:1
position: 2227113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2227223:1
position: 2227223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2228258-2228367:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2241913-2243978:1:exon

LOC104913242
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913242
product: uncharacterized LOC104913242, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004161383.1
SIO_010081: LOC104913242
subclass of: SO_0000673
so part of: LOC104913242
location: join(2204513..2206588,2206997..2207069,2208154..2208278,2209114..2209174,2210075..2210123,2210889..2212724,2214974..2215139,2215311..2215497,2216670..2216793,2225041..2225133,2225755..2225878,2228258..2228367,2241913..2243978)
location: region:2204513-2243978:1
so has part: feature:2204513-2206588:1:exon
so has part: feature:2206997-2207069:1:exon
so has part: feature:2208154-2208278:1:exon
so has part: feature:2209114-2209174:1:exon
so has part: feature:2210075-2210123:1:exon
so has part: feature:2210889-2212724:1:exon
so has part: feature:2214974-2215139:1:exon
so has part: feature:2215311-2215497:1:exon
so has part: feature:2216670-2216793:1:exon
so has part: feature:2225041-2225133:1:exon
so has part: feature:2225755-2225878:1:exon
so has part: feature:2228258-2228367:1:exon
so has part: feature:2241913-2243978:1:exon

position:2204513:1
position: 2204513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204513-2206588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2206997-2207069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2208154-2208278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2209114-2209174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2210075-2210123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2210889-2212724:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2214974-2215139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2215311-2215497:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2216670-2216793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2225041-2225133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2225755-2225878:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2228258-2228367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2241913-2243978:1:exon

LOC104913242
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913242
product: uncharacterized LOC104913242, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004161388.1
SIO_010081: LOC104913242
subclass of: SO_0000673
so part of: LOC104913242
location: join(2204521..2206588,2206997..2207069,2208154..2208278,2209114..2209174,2210075..2210123,2210889..2212724,2214974..2215139,2215311..2215497,2216670..2216793,2225041..2225133,2225755..2225878,2228258..2228367,2241913..2242212,2242405..2243978)
location: region:2204521-2243978:1
so has part: feature:2204521-2206588:1:exon
so has part: feature:2206997-2207069:1:exon
so has part: feature:2208154-2208278:1:exon
so has part: feature:2209114-2209174:1:exon
so has part: feature:2210075-2210123:1:exon
so has part: feature:2210889-2212724:1:exon
so has part: feature:2214974-2215139:1:exon
so has part: feature:2215311-2215497:1:exon
so has part: feature:2216670-2216793:1:exon
so has part: feature:2225041-2225133:1:exon
so has part: feature:2225755-2225878:1:exon
so has part: feature:2228258-2228367:1:exon
so has part: feature:2241913-2242212:1:exon
so has part: feature:2242405-2243978:1:exon

position:2204521:1
position: 2204521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204521-2206588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2206997-2207069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2208154-2208278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2209114-2209174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2210075-2210123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2210889-2212724:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2214974-2215139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2215311-2215497:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2216670-2216793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2225041-2225133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2225755-2225878:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2228258-2228367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2241913-2242212:1:exon

position:2242212:1
position: 2242212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2242405-2243978:1:exon

position:2242405:1
position: 2242405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913242
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913242
product: uncharacterized LOC104913242, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004161385.1
SIO_010081: LOC104913242
subclass of: SO_0000673
so part of: LOC104913242
location: join(2204522..2206588,2206997..2207069,2208154..2208278,2209114..2209174,2210075..2210123,2210889..2212724,2214974..2215139,2215311..2215497,2216670..2216793,2225041..2225133,2225755..2225878,2228258..2228367,2241913..2242541,2244359..2246419)
location: region:2204522-2246419:1
so has part: feature:2204522-2206588:1:exon
so has part: feature:2206997-2207069:1:exon
so has part: feature:2208154-2208278:1:exon
so has part: feature:2209114-2209174:1:exon
so has part: feature:2210075-2210123:1:exon
so has part: feature:2210889-2212724:1:exon
so has part: feature:2214974-2215139:1:exon
so has part: feature:2215311-2215497:1:exon
so has part: feature:2216670-2216793:1:exon
so has part: feature:2225041-2225133:1:exon
so has part: feature:2225755-2225878:1:exon
so has part: feature:2228258-2228367:1:exon
so has part: feature:2241913-2242541:1:exon
so has part: feature:2244359-2246419:1:exon

position:2204522:1
position: 2204522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204522-2206588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2206997-2207069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2208154-2208278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2209114-2209174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2210075-2210123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2210889-2212724:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2214974-2215139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2215311-2215497:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2216670-2216793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2225041-2225133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2225755-2225878:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2228258-2228367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2241913-2242541:1:exon

position:2242541:1
position: 2242541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2244359-2246419:1:exon

position:2244359:1
position: 2244359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913242
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913242
product: uncharacterized LOC104913242, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004161387.1
SIO_010081: LOC104913242
subclass of: SO_0000673
so part of: LOC104913242
location: join(2204522..2206588,2206997..2207069,2208154..2208278,2209114..2209174,2210075..2210123,2210889..2212724,2214974..2215139,2215311..2215497,2216670..2216793,2225041..2225133,2225755..2225878,2228258..2228367,2241913..2242541,2243989..2244328)
location: region:2204522-2244328:1
so has part: feature:2204522-2206588:1:exon
so has part: feature:2206997-2207069:1:exon
so has part: feature:2208154-2208278:1:exon
so has part: feature:2209114-2209174:1:exon
so has part: feature:2210075-2210123:1:exon
so has part: feature:2210889-2212724:1:exon
so has part: feature:2214974-2215139:1:exon
so has part: feature:2215311-2215497:1:exon
so has part: feature:2216670-2216793:1:exon
so has part: feature:2225041-2225133:1:exon
so has part: feature:2225755-2225878:1:exon
so has part: feature:2228258-2228367:1:exon
so has part: feature:2241913-2242541:1:exon
so has part: feature:2243989-2244328:1:exon

position:2244328:1
position: 2244328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2204522-2206588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2206997-2207069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2208154-2208278:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2209114-2209174:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2210075-2210123:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2210889-2212724:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2214974-2215139:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2215311-2215497:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2216670-2216793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2225041-2225133:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2225755-2225878:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2228258-2228367:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2241913-2242541:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2243989-2244328:1:exon

position:2243989:1
position: 2243989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217204
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2311928..2328700
location: region:2311928-2328700:1
so has part: feature:2311928-2328700:1:exon
subclass of: SO_0000011

116217204
type: Gene
SIO_000068: ncbigene

position:2311928:1
position: 2311928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2328700:1
position: 2328700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2311928-2328700:1:exon

LOC116217204
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217204
product: uncharacterized LOC116217204
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004161389.1
SIO_010081: LOC116217204
subclass of: SO_0000673
so part of: LOC116217204
location: join(2311928..2312059,2321919..2323083,2325928..2328700)
location: region:2311928-2328700:1
so has part: feature:2311928-2312059:1:exon
so has part: feature:2321919-2323083:1:exon
so has part: feature:2325928-2328700:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2311928-2312059:1:exon

position:2312059:1
position: 2312059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2321919-2323083:1:exon

position:2321919:1
position: 2321919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323083:1
position: 2323083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2325928-2328700:1:exon

position:2325928:1
position: 2325928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217205
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217205
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2328933..2377099
location: region:2328933-2377099:1
so has part: feature:2328933-2377099:1:exon
subclass of: SO_0000011

116217205
type: Gene
SIO_000068: ncbigene

position:2328933:1
position: 2328933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2377099:1
position: 2377099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2328933-2377099:1:exon

LOC116217205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217205
product: uncharacterized LOC116217205, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004161390.1
SIO_010081: LOC116217205
subclass of: SO_0000673
so part of: LOC116217205
location: join(2328933..2330173,2330292..2333451,2334201..2334312,2341563..2341658,2342054..2342643,2359527..2359665,2364360..2364530,2365921..2377099)
location: region:2328933-2377099:1
so has part: feature:2328933-2330173:1:exon
so has part: feature:2330292-2333451:1:exon
so has part: feature:2334201-2334312:1:exon
so has part: feature:2341563-2341658:1:exon
so has part: feature:2342054-2342643:1:exon
so has part: feature:2359527-2359665:1:exon
so has part: feature:2364360-2364530:1:exon
so has part: feature:2365921-2377099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2328933-2330173:1:exon

position:2330173:1
position: 2330173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2330292-2333451:1:exon

position:2330292:1
position: 2330292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2333451:1
position: 2333451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2334201-2334312:1:exon

position:2334201:1
position: 2334201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334312:1
position: 2334312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2341563-2341658:1:exon

position:2341563:1
position: 2341563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2341658:1
position: 2341658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2342054-2342643:1:exon

position:2342054:1
position: 2342054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2342643:1
position: 2342643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2359527-2359665:1:exon

position:2359527:1
position: 2359527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2359665:1
position: 2359665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2364360-2364530:1:exon

position:2364360:1
position: 2364360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2364530:1
position: 2364530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2365921-2377099:1:exon

position:2365921:1
position: 2365921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217205
product: uncharacterized LOC116217205, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004161392.1
SIO_010081: LOC116217205
subclass of: SO_0000673
so part of: LOC116217205
location: join(2328933..2330173,2330292..2333451,2334201..2334312,2341563..2341658,2342054..2342643,2359527..2359665,2364360..2364530,2365970..2377099)
location: region:2328933-2377099:1
so has part: feature:2328933-2330173:1:exon
so has part: feature:2330292-2333451:1:exon
so has part: feature:2334201-2334312:1:exon
so has part: feature:2341563-2341658:1:exon
so has part: feature:2342054-2342643:1:exon
so has part: feature:2359527-2359665:1:exon
so has part: feature:2364360-2364530:1:exon
so has part: feature:2365970-2377099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2328933-2330173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2330292-2333451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2334201-2334312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2341563-2341658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2342054-2342643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2359527-2359665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2364360-2364530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2365970-2377099:1:exon

position:2365970:1
position: 2365970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217205
product: uncharacterized LOC116217205, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004161393.1
SIO_010081: LOC116217205
subclass of: SO_0000673
so part of: LOC116217205
location: join(2328933..2330173,2330292..2333451,2334201..2334312,2341563..2341658,2342054..2342643,2359527..2359665,2364360..2364530,2365973..2377099)
location: region:2328933-2377099:1
so has part: feature:2328933-2330173:1:exon
so has part: feature:2330292-2333451:1:exon
so has part: feature:2334201-2334312:1:exon
so has part: feature:2341563-2341658:1:exon
so has part: feature:2342054-2342643:1:exon
so has part: feature:2359527-2359665:1:exon
so has part: feature:2364360-2364530:1:exon
so has part: feature:2365973-2377099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2328933-2330173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2330292-2333451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2334201-2334312:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2341563-2341658:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2342054-2342643:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2359527-2359665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2364360-2364530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2365973-2377099:1:exon

position:2365973:1
position: 2365973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217205
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217205
product: uncharacterized LOC116217205, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004161391.1
SIO_010081: LOC116217205
subclass of: SO_0000673
so part of: LOC116217205
location: join(2328933..2329782,2329906..2330173,2330292..2333451,2334201..2334312,2341563..2341658,2342054..2342643,2359527..2359665,2364360..2364530,2365921..2377099)
location: region:2328933-2377099:1
so has part: feature:2328933-2329782:1:exon
so has part: feature:2329906-2330173:1:exon
so has part: feature:2330292-2333451:1:exon
so has part: feature:2334201-2334312:1:exon
so has part: feature:2341563-2341658:1:exon
so has part: feature:2342054-2342643:1:exon
so has part: feature:2359527-2359665:1:exon
so has part: feature:2364360-2364530:1:exon
so has part: feature:2365921-2377099:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2328933-2329782:1:exon

position:2329782:1
position: 2329782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2329906-2330173:1:exon

position:2329906:1
position: 2329906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2330292-2333451:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2334201-2334312:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2341563-2341658:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2342054-2342643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2359527-2359665:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2364360-2364530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2365921-2377099:1:exon

LOC104913243
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2395126..2399213)
location: region:2395126-2399213:-1
so has part: feature:2395126-2399213:-1:exon
subclass of: SO_0000011

104913243
type: Gene
SIO_000068: ncbigene

position:2395126:-1
position: 2395126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399213:-1
position: 2399213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2395126-2399213:-1:exon

LOC104913243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913243
product: uncharacterized LOC104913243
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002119798.2
SIO_010081: LOC104913243
subclass of: SO_0000673
so part of: LOC104913243
location: complement(join(2395126..2395206,2395326..2395446,2396266..2396345,2396562..2398378,2398499..2399213))
location: region:2395126-2399213:-1
so has part: feature:2398499-2399213:-1:exon
so has part: feature:2396562-2398378:-1:exon
so has part: feature:2396266-2396345:-1:exon
so has part: feature:2395326-2395446:-1:exon
so has part: feature:2395126-2395206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2398499-2399213:-1:exon

position:2398499:-1
position: 2398499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2396562-2398378:-1:exon

position:2396562:-1
position: 2396562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2398378:-1
position: 2398378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2396266-2396345:-1:exon

position:2396266:-1
position: 2396266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2396345:-1
position: 2396345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2395326-2395446:-1:exon

position:2395326:-1
position: 2395326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2395446:-1
position: 2395446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2395126-2395206:-1:exon

position:2395206:-1
position: 2395206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGF18
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FGF18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2415212..2464642)
location: region:2415212-2464642:-1
so has part: feature:2415212-2464642:-1:exon
subclass of: SO_0000010

100539058
type: Gene
SIO_000068: ncbigene

position:2415212:-1
position: 2415212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2464642:-1
position: 2464642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2415212-2464642:-1:exon

FGF18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FGF18
product: fibroblast growth factor 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_010718873.3
SIO_010081: FGF18
subclass of: SO_0000673
so part of: FGF18
location: complement(join(2415212..2415528,2432747..2432853,2457565..2457745,2464456..2464642))
location: region:2415212-2464642:-1
so has part: feature:2464456-2464642:-1:exon
so has part: feature:2457565-2457745:-1:exon
so has part: feature:2432747-2432853:-1:exon
so has part: feature:2415212-2415528:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2464456-2464642:-1:exon

position:2464456:-1
position: 2464456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2457565-2457745:-1:exon

position:2457565:-1
position: 2457565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2457745:-1
position: 2457745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2432747-2432853:-1:exon

position:2432747:-1
position: 2432747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2432853:-1
position: 2432853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2415212-2415528:-1:exon

position:2415528:-1
position: 2415528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition