Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 14, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 14, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015024.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015024.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000975.2.\nOn Dec 18, 2014 this sequence version replaced NC_015024.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19532596
topology: linear
so has quality: SO_0000987
location: 1..19532596
location: region:1-19532596:1
RO_0002162: 9103

NC_015024
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19532596:1
position: 19532596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19532596:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 14
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

LOC104913089
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9635..25815
location: region:9635-25815:1
so has part: feature:9635-25815:1:exon
subclass of: SO_0000011

104913089
type: Gene
SIO_000068: ncbigene

position:9635:1
position: 9635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25815:1
position: 25815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9635-25815:1:exon

LOC104913089
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913089
product: uncharacterized LOC104913089, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_795114.2
SIO_010081: LOC104913089
subclass of: SO_0000673
so part of: LOC104913089
location: join(9635..9674,19581..19829,20853..20975,21904..25815)
location: region:9635-25815:1
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so has part: feature:19581-19829:1:exon
so has part: feature:20853-20975:1:exon
so has part: feature:21904-25815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9635-9674:1:exon

position:9674:1
position: 9674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19581-19829:1:exon

position:19581:1
position: 19581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19829:1
position: 19829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:20853-20975:1:exon

position:20853:1
position: 20853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20975:1
position: 20975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21904-25815:1:exon

position:21904:1
position: 21904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913089
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913089
product: uncharacterized LOC104913089, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002119525.1
SIO_010081: LOC104913089
subclass of: SO_0000673
so part of: LOC104913089
location: join(9635..9674,19581..19829,20853..20975,21904..23172,24254..25815)
location: region:9635-25815:1
so has part: feature:9635-9674:1:exon
so has part: feature:19581-19829:1:exon
so has part: feature:20853-20975:1:exon
so has part: feature:21904-23172:1:exon
so has part: feature:24254-25815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9635-9674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19581-19829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20853-20975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:21904-23172:1:exon

position:23172:1
position: 23172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:24254-25815:1:exon

position:24254:1
position: 24254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913089
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913089
product: uncharacterized LOC104913089, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_795115.2
SIO_010081: LOC104913089
subclass of: SO_0000673
so part of: LOC104913089
location: join(9635..9674,19581..19829,20882..20975,21904..25815)
location: region:9635-25815:1
so has part: feature:9635-9674:1:exon
so has part: feature:19581-19829:1:exon
so has part: feature:20882-20975:1:exon
so has part: feature:21904-25815:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9635-9674:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:19581-19829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:20882-20975:1:exon

position:20882:1
position: 20882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:21904-25815:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 44340..44439
location: region:44340-44439:1
so has part: feature:44340-44439:1:region

position:44340:1
position: 44340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44439:1
position: 44439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:44340-44439:1:region

LOC104913090
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(46446..61310)
location: region:46446-61310:-1
so has part: feature:46446-61310:-1:exon
subclass of: SO_0000011

104913090
type: Gene
SIO_000068: ncbigene

position:46446:-1
position: 46446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61310:-1
position: 61310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46446-61310:-1:exon

LOC104913090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913090
product: uncharacterized LOC104913090, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004161271.1
SIO_010081: LOC104913090
subclass of: SO_0000673
so part of: LOC104913090
location: complement(join(46446..47027,48565..48651,48753..48859,50323..50893,50991..51055,52421..52491,54036..54208,57079..57222,58529..58773,59035..59198,60266..61310))
location: region:46446-61310:-1
so has part: feature:60266-61310:-1:exon
so has part: feature:59035-59198:-1:exon
so has part: feature:58529-58773:-1:exon
so has part: feature:57079-57222:-1:exon
so has part: feature:54036-54208:-1:exon
so has part: feature:52421-52491:-1:exon
so has part: feature:50991-51055:-1:exon
so has part: feature:50323-50893:-1:exon
so has part: feature:48753-48859:-1:exon
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so has part: feature:46446-47027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60266-61310:-1:exon

position:60266:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:59035-59198:-1:exon

position:59035:-1
position: 59035
reference: sequence
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position:59198:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:58529-58773:-1:exon

position:58529:-1
position: 58529
reference: sequence
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position:58773:-1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:57079-57222:-1:exon

position:57079:-1
position: 57079
reference: sequence
type: ReverseStrandPosition
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position:57222:-1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:54036-54208:-1:exon

position:54036:-1
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reference: sequence
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position:54208:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:52421-52491:-1:exon

position:52421:-1
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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:50991-51055:-1:exon

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urn:…
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SIO_000628: feature:50323-50893:-1:exon

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urn:…
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urn:…
SIO_000300: 10
SIO_000628: feature:48565-48651:-1:exon

position:48565:-1
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reference: sequence
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position:48651:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:46446-47027:-1:exon

position:47027:-1
position: 47027
reference: sequence
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LOC104913090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913090
product: uncharacterized LOC104913090, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004161273.1
SIO_010081: LOC104913090
subclass of: SO_0000673
so part of: LOC104913090
location: complement(join(46959..47027,48753..48859,50323..50893,50991..51055,57079..57222,58529..58773,59035..59198,60266..61310))
location: region:46959-61310:-1
so has part: feature:60266-61310:-1:exon
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so has part: feature:50991-51055:-1:exon
so has part: feature:50323-50893:-1:exon
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position:46959:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:60266-61310:-1:exon

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SIO_000628: feature:58529-58773:-1:exon

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SIO_000300: 4
SIO_000628: feature:57079-57222:-1:exon

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SIO_000300: 5
SIO_000628: feature:50991-51055:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:50323-50893:-1:exon

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SIO_000300: 7
SIO_000628: feature:48753-48859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:46959-47027:-1:exon

LOC104913090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913090
product: uncharacterized LOC104913090, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004161270.1
SIO_010081: LOC104913090
subclass of: SO_0000673
so part of: LOC104913090
location: complement(join(46959..47027,48753..48859,50323..50893,50991..51055,52421..52488,54036..54208,57079..57222,58529..58773,59035..59198,60266..61310))
location: region:46959-61310:-1
so has part: feature:60266-61310:-1:exon
so has part: feature:59035-59198:-1:exon
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so has part: feature:57079-57222:-1:exon
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urn:…
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SIO_000628: feature:54036-54208:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52421-52488:-1:exon

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reference: sequence
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urn:…
SIO_000300: 7
SIO_000628: feature:50991-51055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50323-50893:-1:exon

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SIO_000300: 9
SIO_000628: feature:48753-48859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46959-47027:-1:exon

LOC104913090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913090
product: uncharacterized LOC104913090, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004161269.1
SIO_010081: LOC104913090
subclass of: SO_0000673
so part of: LOC104913090
location: complement(join(46959..47027,48753..48859,50323..50893,50991..51055,52421..52491,54036..54208,57079..57222,58529..58773,59035..59198,60266..61310))
location: region:46959-61310:-1
so has part: feature:60266-61310:-1:exon
so has part: feature:59035-59198:-1:exon
so has part: feature:58529-58773:-1:exon
so has part: feature:57079-57222:-1:exon
so has part: feature:54036-54208:-1:exon
so has part: feature:52421-52491:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:60266-61310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59035-59198:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58529-58773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57079-57222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:54036-54208:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52421-52491:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:50991-51055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50323-50893:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48753-48859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46959-47027:-1:exon

LOC104913090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913090
product: uncharacterized LOC104913090, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004161272.1
SIO_010081: LOC104913090
subclass of: SO_0000673
so part of: LOC104913090
location: complement(join(46959..47027,48753..48859,50323..50893,50991..51055,52870..52924,54036..54208,57079..57222,58529..58773,59035..59198,60266..61310))
location: region:46959-61310:-1
so has part: feature:60266-61310:-1:exon
so has part: feature:59035-59198:-1:exon
so has part: feature:58529-58773:-1:exon
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so has part: feature:50323-50893:-1:exon
so has part: feature:48753-48859:-1:exon
so has part: feature:46959-47027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60266-61310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:59035-59198:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58529-58773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:57079-57222:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:54036-54208:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:52870-52924:-1:exon

position:52870:-1
position: 52870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:52924:-1
position: 52924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:50991-51055:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:50323-50893:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:48753-48859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:46959-47027:-1:exon

LOC116217160
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217160
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 89743..95140
location: region:89743-95140:1
so has part: feature:89743-95140:1:exon
subclass of: SO_0000011

116217160
type: Gene
SIO_000068: ncbigene

position:89743:1
position: 89743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95140:1
position: 95140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:89743-95140:1:exon

LOC116217160
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217160
product: uncharacterized LOC116217160
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161274.1
SIO_010081: LOC116217160
subclass of: SO_0000673
so part of: LOC116217160
location: join(89743..90057,93743..93842,95056..95140)
location: region:89743-95140:1
so has part: feature:89743-90057:1:exon
so has part: feature:93743-93842:1:exon
so has part: feature:95056-95140:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:89743-90057:1:exon

position:90057:1
position: 90057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:93743-93842:1:exon

position:93743:1
position: 93743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93842:1
position: 93842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:95056-95140:1:exon

position:95056:1
position: 95056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SFMBT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SFMBT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 104310..181964
location: region:104310-181964:1
so has part: feature:104310-181964:1:exon
subclass of: SO_0000010

100538437
type: Gene
SIO_000068: ncbigene

position:104310:1
position: 104310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181964:1
position: 181964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:104310-181964:1:exon

SFMBT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SFMBT1
product: Scm like with four mbt domains 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031555519.1
SIO_010081: SFMBT1
subclass of: SO_0000673
so part of: SFMBT1
location: join(104310..104810,109502..109583,145811..145967,151337..151431,155812..156052,156343..156431,157723..157969,159277..159372,160426..160527,161669..161819,163420..163502,164861..164987,165695..165808,166943..166985,168118..168182,169560..169699,171354..171463,173786..173961,174738..174914,175098..175343,175830..175958,176655..181964)
location: region:104310-181964:1
so has part: feature:104310-104810:1:exon
so has part: feature:109502-109583:1:exon
so has part: feature:145811-145967:1:exon
so has part: feature:151337-151431:1:exon
so has part: feature:155812-156052:1:exon
so has part: feature:156343-156431:1:exon
so has part: feature:157723-157969:1:exon
so has part: feature:159277-159372:1:exon
so has part: feature:160426-160527:1:exon
so has part: feature:161669-161819:1:exon
so has part: feature:163420-163502:1:exon
so has part: feature:164861-164987:1:exon
so has part: feature:165695-165808:1:exon
so has part: feature:166943-166985:1:exon
so has part: feature:168118-168182:1:exon
so has part: feature:169560-169699:1:exon
so has part: feature:171354-171463:1:exon
so has part: feature:173786-173961:1:exon
so has part: feature:174738-174914:1:exon
so has part: feature:175098-175343:1:exon
so has part: feature:175830-175958:1:exon
so has part: feature:176655-181964:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:104310-104810:1:exon

position:104810:1
position: 104810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:109502-109583:1:exon

position:109502:1
position: 109502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:109583:1
position: 109583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:145811-145967:1:exon

position:145811:1
position: 145811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145967:1
position: 145967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:151337-151431:1:exon

position:151337:1
position: 151337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151431:1
position: 151431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:155812-156052:1:exon

position:155812:1
position: 155812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156052:1
position: 156052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:156343-156431:1:exon

position:156343:1
position: 156343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156431:1
position: 156431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:157723-157969:1:exon

position:157723:1
position: 157723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157969:1
position: 157969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:159277-159372:1:exon

position:159277:1
position: 159277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159372:1
position: 159372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:160426-160527:1:exon

position:160426:1
position: 160426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:160527:1
position: 160527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:161669-161819:1:exon

position:161669:1
position: 161669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:161819:1
position: 161819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:163420-163502:1:exon

position:163420:1
position: 163420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:163502:1
position: 163502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:164861-164987:1:exon

position:164861:1
position: 164861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:164987:1
position: 164987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:165695-165808:1:exon

position:165695:1
position: 165695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165808:1
position: 165808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:166943-166985:1:exon

position:166943:1
position: 166943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:166985:1
position: 166985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:168118-168182:1:exon

position:168118:1
position: 168118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168182:1
position: 168182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:169560-169699:1:exon

position:169560:1
position: 169560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:169699:1
position: 169699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:171354-171463:1:exon

position:171354:1
position: 171354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:171463:1
position: 171463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:173786-173961:1:exon

position:173786:1
position: 173786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:173961:1
position: 173961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:174738-174914:1:exon

position:174738:1
position: 174738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:174914:1
position: 174914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:175098-175343:1:exon

position:175098:1
position: 175098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175343:1
position: 175343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:175830-175958:1:exon

position:175830:1
position: 175830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:175958:1
position: 175958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:176655-181964:1:exon

position:176655:1
position: 176655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SFMBT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SFMBT1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:159318..159320,aa:OTHER)
transl except: (pos:174861..174863,aa:OTHER)
product: LOW QUALITY PROTEIN: scm-like with four MBT domains protein 1
translation: MNGEQRHDADAGSGVEDMEFSWDEYLEDTGAVAAPHGSFKHVDTSLQNGFAPGMKLEVAVKSDQNTYWVATIITTCGQLLLLRYDGYGEDRKADFWCDIMTADLHPIGWCEQNEKVLKVPEGIKDKIPDQEEFLQQVLKGACSAPANLLEGLHRGKNPLDLIAPGSRLELQNSRDALEAWIVNVVENVGGRLKMRYEGLEDSDKFDQWIFYLDPFLHQVGWATQNGYNLQPPLAIRSLKSEADWQESXRRKEEEEESSVPTDLFKDKPVIGVHSFSEGMKLEAVDPTAPFVISPATVLKVYNEKYFMIEIDDLRPERATSQSYICHVNSAGIFPVQWSLKNGVHLSPPPGYPGQDFDWADYLKQCGAEAAPQSCFPSLTSDHGFKENMKLEAVNPVDPEEVCIATVTKLRDSYLWLQLEGSKKPIPDCIVSVESMNIFPVGWCETNGYQLRPPCKAIVNKQKKIAVVQPEKQILSSRTVHDGLKNQELNSSDSVVINGKYCCPKIYFNHRCFSGPYLNKGRIAELPQSVGPGNCVLVLKEVLTLLINAAYKPSRVLRELQLDEEAAWHGHGETLKAKYKGKSYRATVEVVRTADRVADFCRKTCIKLECCPNLFGPQMVLDKCSENCSVLTKTKYTHYYGKRKNKRIGRPPGGHSNLEVAMKKPNKRRKKRXNIFCSXEKRSSTSVDNTPAGSPQGSGGEEEDDQDEVDEESLSEDSTSEQQDELLEESEVSEKKSLSSSPTQSELSHSLTQDQDKRKRKLRTFSFSDDENKPPSPKEIKIEVAEKLQLDSNPLEWSVADVVRFLKSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGPAIKLCHHIERVKLAFYQQFAN
SIO_010081: SFMBT1
subclass of: SO_0000673
so part of: SFMBT1
location: join(145940..145967,151337..151431,155812..156052,156343..156431,157723..157969,159277..159372,160426..160527,161669..161819,163420..163502,164861..164987,165695..165808,166943..166985,168118..168182,169560..169699,171354..171463,173786..173961,174738..174914,175098..175343,175830..175958,176655..176795)
location: region:145940-176795:1
so has part: feature:145940-145967:1:exon
so has part: feature:151337-151431:1:exon
so has part: feature:155812-156052:1:exon
so has part: feature:156343-156431:1:exon
so has part: feature:157723-157969:1:exon
so has part: feature:159277-159372:1:exon
so has part: feature:160426-160527:1:exon
so has part: feature:161669-161819:1:exon
so has part: feature:163420-163502:1:exon
so has part: feature:164861-164987:1:exon
so has part: feature:165695-165808:1:exon
so has part: feature:166943-166985:1:exon
so has part: feature:168118-168182:1:exon
so has part: feature:169560-169699:1:exon
so has part: feature:171354-171463:1:exon
so has part: feature:173786-173961:1:exon
so has part: feature:174738-174914:1:exon
so has part: feature:175098-175343:1:exon
so has part: feature:175830-175958:1:exon
so has part: feature:176655-176795:1:exon

XP_031411379.1
type: Protein
SIO_000068: ncbiprotein

position:145940:1
position: 145940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176795:1
position: 176795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145940-145967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:151337-151431:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:155812-156052:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:156343-156431:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:157723-157969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:159277-159372:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:160426-160527:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:161669-161819:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:163420-163502:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:164861-164987:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:165695-165808:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:166943-166985:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:168118-168182:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:169560-169699:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:171354-171463:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:173786-173961:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:174738-174914:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:175098-175343:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:175830-175958:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:176655-176795:1:exon

LOC100538902
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100538902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 195440..220734
location: region:195440-220734:1
so has part: feature:195440-220734:1:exon
subclass of: SO_0000010

100538902
type: Gene
SIO_000068: ncbigene

position:195440:1
position: 195440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220734:1
position: 220734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195440-220734:1:exon

LOC100538902
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100538902
product: store-operated calcium entry regulator STIMATE-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555491.1
SIO_010081: LOC100538902
subclass of: SO_0000673
so part of: LOC100538902
location: join(195440..195476,196953..197001,199070..199165,202284..202405,207710..207822,208704..208781,209671..209820,210833..210946,217146..217541,219601..219721,220381..220734)
location: region:195440-220734:1
so has part: feature:195440-195476:1:exon
so has part: feature:196953-197001:1:exon
so has part: feature:199070-199165:1:exon
so has part: feature:202284-202405:1:exon
so has part: feature:207710-207822:1:exon
so has part: feature:208704-208781:1:exon
so has part: feature:209671-209820:1:exon
so has part: feature:210833-210946:1:exon
so has part: feature:217146-217541:1:exon
so has part: feature:219601-219721:1:exon
so has part: feature:220381-220734:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195440-195476:1:exon

position:195476:1
position: 195476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196953-197001:1:exon

position:196953:1
position: 196953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197001:1
position: 197001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199070-199165:1:exon

position:199070:1
position: 199070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199165:1
position: 199165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:202284-202405:1:exon

position:202284:1
position: 202284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:202405:1
position: 202405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:207710-207822:1:exon

position:207710:1
position: 207710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207822:1
position: 207822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:208704-208781:1:exon

position:208704:1
position: 208704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:208781:1
position: 208781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:209671-209820:1:exon

position:209671:1
position: 209671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209820:1
position: 209820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:210833-210946:1:exon

position:210833:1
position: 210833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210946:1
position: 210946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:217146-217541:1:exon

position:217146:1
position: 217146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:217541:1
position: 217541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:219601-219721:1:exon

position:219601:1
position: 219601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:219721:1
position: 219721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:220381-220734:1:exon

position:220381:1
position: 220381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100538902
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100538902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: store-operated calcium entry regulator STIMATE-like
translation: MLLMETHVKRLREPKHERRPWRIWFLDTSKQAIGMLFIHFANVYLSDLTEEDPCSLYLINFLLDATLGMLLIYAGVRAVSIIVEWQQWESLRFGEYGDPLQCSAWMGQCALYIMIMTFEKTIIIIVLLIPQWKEVALLNPIENPQLELAIVMLIVPFFVNAFIFWVVDNFLMKKGKTKAKLEEKEAGQDSRNGSKVRYRRAASHEESESEILISADDEMEESDMEEDLRRLTNLKPVKKKKHRFGLPVRAYFPMQEKNRWPPFPSRIFKACVCNQVLPFKVHSVRPQRPPCRAAPLPPQLSAPITATLRVLQSLPGITPHGLNHPRHCFGKVTPPLTSRWMLYISLGEQHVLHGTRAAFKRSWETTSAGIGAAGAAVMSQPEPVKKKRPPVKEEDLKGARGNLSKNQEIKSKTYQVMKQCEQMGSAAPSIFSRARTGDETVFEKSKDEPPKSVFG
SIO_010081: LOC100538902
subclass of: SO_0000673
so part of: LOC100538902
location: join(195455..195476,196953..197001,199070..199165,202284..202405,207710..207822,208704..208781,209671..209820,210833..210946,217146..217541,219601..219721,220381..220487)
location: region:195455-220487:1
so has part: feature:195455-195476:1:exon
so has part: feature:196953-197001:1:exon
so has part: feature:199070-199165:1:exon
so has part: feature:202284-202405:1:exon
so has part: feature:207710-207822:1:exon
so has part: feature:208704-208781:1:exon
so has part: feature:209671-209820:1:exon
so has part: feature:210833-210946:1:exon
so has part: feature:217146-217541:1:exon
so has part: feature:219601-219721:1:exon
so has part: feature:220381-220487:1:exon

XP_031411351.1
type: Protein
SIO_000068: ncbiprotein

position:195455:1
position: 195455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:220487:1
position: 220487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195455-195476:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196953-197001:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:199070-199165:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:202284-202405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:207710-207822:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:208704-208781:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:209671-209820:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210833-210946:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:217146-217541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:219601-219721:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:220381-220487:1:exon

LOC109369894
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(224447..227763)
location: region:224447-227763:-1
so has part: feature:224447-227763:-1:exon
subclass of: SO_0000011

109369894
type: Gene
SIO_000068: ncbigene

position:224447:-1
position: 224447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227763:-1
position: 227763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:224447-227763:-1:exon

LOC109369894
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369894
product: uncharacterized LOC109369894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002119527.2
SIO_010081: LOC109369894
subclass of: SO_0000673
so part of: LOC109369894
location: complement(join(224447..225008,225592..227763))
location: region:224447-227763:-1
so has part: feature:225592-227763:-1:exon
so has part: feature:224447-225008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225592-227763:-1:exon

position:225592:-1
position: 225592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:224447-225008:-1:exon

position:225008:-1
position: 225008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100539056
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100539056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(229552..251809)
location: region:229552-251809:-1
so has part: feature:229552-251809:-1:exon
subclass of: SO_0000010

100539056
type: Gene
SIO_000068: ncbigene

position:229552:-1
position: 229552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251809:-1
position: 251809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:229552-251809:-1:exon

LOC100539056
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100539056
product: inter-alpha-trypsin inhibitor heavy chain H3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010718264.3
SIO_010081: LOC100539056
subclass of: SO_0000673
so part of: LOC100539056
location: complement(join(229552..229937,230059..230170,231573..231745,232830..233034,233600..233713,234326..234376,235261..235287,236054..236059,237544..237698,238052..238191,238798..238983,239837..240022,240262..240383,240695..240863,242694..242810,243334..243459,244069..244179,245011..245173,245590..245694,246769..246935,248043..248066,251704..251809))
location: region:229552-251809:-1
so has part: feature:251704-251809:-1:exon
so has part: feature:248043-248066:-1:exon
so has part: feature:246769-246935:-1:exon
so has part: feature:245590-245694:-1:exon
so has part: feature:245011-245173:-1:exon
so has part: feature:244069-244179:-1:exon
so has part: feature:243334-243459:-1:exon
so has part: feature:242694-242810:-1:exon
so has part: feature:240695-240863:-1:exon
so has part: feature:240262-240383:-1:exon
so has part: feature:239837-240022:-1:exon
so has part: feature:238798-238983:-1:exon
so has part: feature:238052-238191:-1:exon
so has part: feature:237544-237698:-1:exon
so has part: feature:236054-236059:-1:exon
so has part: feature:235261-235287:-1:exon
so has part: feature:234326-234376:-1:exon
so has part: feature:233600-233713:-1:exon
so has part: feature:232830-233034:-1:exon
so has part: feature:231573-231745:-1:exon
so has part: feature:230059-230170:-1:exon
so has part: feature:229552-229937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:251704-251809:-1:exon

position:251704:-1
position: 251704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:248043-248066:-1:exon

position:248043:-1
position: 248043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248066:-1
position: 248066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:246769-246935:-1:exon

position:246769:-1
position: 246769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:246935:-1
position: 246935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:245590-245694:-1:exon

position:245590:-1
position: 245590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245694:-1
position: 245694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:245011-245173:-1:exon

position:245011:-1
position: 245011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245173:-1
position: 245173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:244069-244179:-1:exon

position:244069:-1
position: 244069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244179:-1
position: 244179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:243334-243459:-1:exon

position:243334:-1
position: 243334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243459:-1
position: 243459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242694-242810:-1:exon

position:242694:-1
position: 242694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:242810:-1
position: 242810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:240695-240863:-1:exon

position:240695:-1
position: 240695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240863:-1
position: 240863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:240262-240383:-1:exon

position:240262:-1
position: 240262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240383:-1
position: 240383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:239837-240022:-1:exon

position:239837:-1
position: 239837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240022:-1
position: 240022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:238798-238983:-1:exon

position:238798:-1
position: 238798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238983:-1
position: 238983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:238052-238191:-1:exon

position:238052:-1
position: 238052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238191:-1
position: 238191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:237544-237698:-1:exon

position:237544:-1
position: 237544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:237698:-1
position: 237698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:236054-236059:-1:exon

position:236054:-1
position: 236054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236059:-1
position: 236059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:235261-235287:-1:exon

position:235261:-1
position: 235261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:235287:-1
position: 235287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:234326-234376:-1:exon

position:234326:-1
position: 234326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234376:-1
position: 234376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:233600-233713:-1:exon

position:233600:-1
position: 233600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233713:-1
position: 233713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:232830-233034:-1:exon

position:232830:-1
position: 232830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233034:-1
position: 233034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:231573-231745:-1:exon

position:231573:-1
position: 231573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231745:-1
position: 231745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:230059-230170:-1:exon

position:230059:-1
position: 230059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230170:-1
position: 230170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:229552-229937:-1:exon

position:229937:-1
position: 229937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100539056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100539056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inter-alpha-trypsin inhibitor heavy chain H3
translation: MESHLLLCILLLIPAFASSDFLVTHVRNIKKRNSDNDLVVNGIEIYRMKIDSKVTSRFAHNVITSRAVNRGNAHKEVFFDVELPKTAFITNFSMTIDGITYPGNIKEKEAAKQQYEKAVSKGQTAGLVKASGRKTEKFTVSVNIAAGSKVTFELIYEELLKRQFGKYEMFIKVKPKQLVKDFEIEVNIFEPQGISELEAEGTFITNDLQNVIRKTFSHKKGHISFKPTLDQQRTCENCSQSLLDGDFIVKYDVERTTPDNLQIVNGYFVHFFAPMNLPKLPKNVIFIIDISGSMSGREIQQTREALLKILDDIKEDDHFNFILFGSDVHTWKETLIKATPENLDEARKFVRGIDTKGLTNLYGGMMKGIDMLNAAHEGNLVPKRSASIIIMLTDGQPNVGISNTQDIQTHVKKAIEGKYTLYNLGFGYGVDYNFLEKMALENKGLARRIYPDSDSALQLQGFYDEVSNPMLRDVELNYPENEIADVTKNSFKHFYDGSEIVVAGRLRDINQNSLTVDVKGEGANDALSFTSQQDKEQTAKAFQEQEYIFGDFIERLWAYLTIEQLLEKRISATGEEKDNLTAEALDLSLKYKFVTPLTSMVVTKPEEDENQAAIADKPTEAEAQAAPIVAQASPVHYVHASNPTWYTSVDGDPHFIISVPQKEDAICFNINENPGAVLRLINDPVTGITVNGELIGDKKVNNDAKIQNTYFGKLGIANKHLDLKVTVTPEKITIQNETGKTTFTWLDSVTVQQESLTLIINKKKSLVLSMGSGASFVIVLHQVWKKHPLHRDFLGLYTLESHKLSEQTHGLLGQFFHPIDFAILEIHPGSDPKKPDATMIFKNKELIVTRGWQKDYRRDPEHGIDIPCWFVHNNGAGLIDGVHTDYVVSSLF
SIO_010081: LOC100539056
subclass of: SO_0000673
so part of: LOC100539056
location: complement(join(229808..229937,230059..230170,231573..231745,232830..233034,233600..233713,234326..234376,235261..235287,236054..236059,237544..237698,238052..238191,238798..238983,239837..240022,240262..240383,240695..240863,242694..242810,243334..243459,244069..244179,245011..245173,245590..245694,246769..246935,248043..248066,251704..251793))
location: region:229808-251793:-1
so has part: feature:251704-251793:-1:exon
so has part: feature:248043-248066:-1:exon
so has part: feature:246769-246935:-1:exon
so has part: feature:245590-245694:-1:exon
so has part: feature:245011-245173:-1:exon
so has part: feature:244069-244179:-1:exon
so has part: feature:243334-243459:-1:exon
so has part: feature:242694-242810:-1:exon
so has part: feature:240695-240863:-1:exon
so has part: feature:240262-240383:-1:exon
so has part: feature:239837-240022:-1:exon
so has part: feature:238798-238983:-1:exon
so has part: feature:238052-238191:-1:exon
so has part: feature:237544-237698:-1:exon
so has part: feature:236054-236059:-1:exon
so has part: feature:235261-235287:-1:exon
so has part: feature:234326-234376:-1:exon
so has part: feature:233600-233713:-1:exon
so has part: feature:232830-233034:-1:exon
so has part: feature:231573-231745:-1:exon
so has part: feature:230059-230170:-1:exon
so has part: feature:229808-229937:-1:exon

XP_010716566.1
type: Protein
SIO_000068: ncbiprotein

position:229808:-1
position: 229808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:251793:-1
position: 251793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:251704-251793:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248043-248066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:246769-246935:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:245590-245694:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:245011-245173:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:244069-244179:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:243334-243459:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:242694-242810:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:240695-240863:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:240262-240383:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:239837-240022:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:238798-238983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:238052-238191:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:237544-237698:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:236054-236059:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:235261-235287:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:234326-234376:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:233600-233713:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:232830-233034:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:231573-231745:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:230059-230170:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:229808-229937:-1:exon

LOC109369893
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 230177..232237
location: region:230177-232237:1
so has part: feature:230177-232237:1:exon
subclass of: SO_0000011

109369893
type: Gene
SIO_000068: ncbigene

position:230177:1
position: 230177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:232237:1
position: 232237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230177-232237:1:exon

LOC109369893
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369893
product: uncharacterized LOC109369893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XR_002119526.1
SIO_010081: LOC109369893
subclass of: SO_0000673
so part of: LOC109369893
location: join(230177..230813,232131..232237)
location: region:230177-232237:1
so has part: feature:230177-230813:1:exon
so has part: feature:232131-232237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:230177-230813:1:exon

position:230813:1
position: 230813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:232131-232237:1:exon

position:232131:1
position: 232131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEK4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NEK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 255538..270080
location: region:255538-270080:1
so has part: feature:255538-270080:1:exon
subclass of: SO_0000010

100539213
type: Gene
SIO_000068: ncbigene

position:255538:1
position: 255538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270080:1
position: 270080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:255538-270080:1:exon

NEK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NEK4
product: NIMA related kinase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_019619993.2
SIO_010081: NEK4
subclass of: SO_0000673
so part of: NEK4
location: join(255538..257681,258698..258895,259735..259842,260460..260614,261306..261447,262400..262825,264243..264386,264750..264890,265267..265333,265699..265805,267054..267142,267775..267980,268898..269031,269700..270080)
location: region:255538-270080:1
so has part: feature:255538-257681:1:exon
so has part: feature:258698-258895:1:exon
so has part: feature:259735-259842:1:exon
so has part: feature:260460-260614:1:exon
so has part: feature:261306-261447:1:exon
so has part: feature:262400-262825:1:exon
so has part: feature:264243-264386:1:exon
so has part: feature:264750-264890:1:exon
so has part: feature:265267-265333:1:exon
so has part: feature:265699-265805:1:exon
so has part: feature:267054-267142:1:exon
so has part: feature:267775-267980:1:exon
so has part: feature:268898-269031:1:exon
so has part: feature:269700-270080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:255538-257681:1:exon

position:257681:1
position: 257681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:258698-258895:1:exon

position:258698:1
position: 258698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258895:1
position: 258895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:259735-259842:1:exon

position:259735:1
position: 259735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259842:1
position: 259842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:260460-260614:1:exon

position:260460:1
position: 260460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260614:1
position: 260614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:261306-261447:1:exon

position:261306:1
position: 261306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261447:1
position: 261447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:262400-262825:1:exon

position:262400:1
position: 262400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262825:1
position: 262825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:264243-264386:1:exon

position:264243:1
position: 264243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264386:1
position: 264386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:264750-264890:1:exon

position:264750:1
position: 264750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264890:1
position: 264890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:265267-265333:1:exon

position:265267:1
position: 265267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265333:1
position: 265333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:265699-265805:1:exon

position:265699:1
position: 265699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265805:1
position: 265805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:267054-267142:1:exon

position:267054:1
position: 267054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267142:1
position: 267142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:267775-267980:1:exon

position:267775:1
position: 267775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267980:1
position: 267980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:268898-269031:1:exon

position:268898:1
position: 268898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269031:1
position: 269031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:269700-270080:1:exon

position:269700:1
position: 269700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NEK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NEK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase Nek4
translation: MGFCEGGDLYHRLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMARTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPQLVEIIQTMLSKKPEQRPTVKSILRQPYIKHQISLFLEATKMKAAKSHKKMADPKLKDSSSVVPVKNESHNKNTVPPNSSSERGRKCRANEEDCAIKYKASKFCPSEKPAVELSAKPCSNDLDNLGGSLATISGVNIDILPYEKKNFGSEKNSSEHIPESNKAKYVNASGNSEIISSNPPMKTDGLQKKTKQASKGGSVDSKHSSVDAVEDDDDTLKLLQPALKDQKQTDVDVVYHGASGDAQEKITSQLQPPGSTHEPSVSRQQWQKKRELAEVCSEKFRAVSPRPLPFPADVNVKTAQSCAEEHIAKISAPASSTRTSQDAIAKERPLSARERRRLKQSREEMFPSVIPARRTGSSAVVEGKSHVENRVKVAQSSSDPSTSQKSRETHCLSDDELSSSTSSTDKSDGDSKEKKSSVSEVNELVQLMIWTLRMDPKENSECSVTSTPAPEFKLHRKYRDTLILHGKSSEESEDFKFEEIPSDMLSGPEKMRRMVEVLRSDVVRGLGVKLLEKVYSIMEEEDEVKRELQLREHMGDKYVSYSVKARHLKFLEENVEF
SIO_010081: NEK4
subclass of: SO_0000673
so part of: NEK4
location: join(257568..257681,258698..258895,259735..259842,260460..260614,261306..261447,262400..262825,264243..264386,264750..264890,265267..265333,265699..265805,267054..267142,267775..267980,268898..269031,269700..269792)
location: region:257568-269792:1
so has part: feature:257568-257681:1:exon
so has part: feature:258698-258895:1:exon
so has part: feature:259735-259842:1:exon
so has part: feature:260460-260614:1:exon
so has part: feature:261306-261447:1:exon
so has part: feature:262400-262825:1:exon
so has part: feature:264243-264386:1:exon
so has part: feature:264750-264890:1:exon
so has part: feature:265267-265333:1:exon
so has part: feature:265699-265805:1:exon
so has part: feature:267054-267142:1:exon
so has part: feature:267775-267980:1:exon
so has part: feature:268898-269031:1:exon
so has part: feature:269700-269792:1:exon

XP_019475538.1
type: Protein
SIO_000068: ncbiprotein

position:257568:1
position: 257568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269792:1
position: 269792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:257568-257681:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:258698-258895:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:259735-259842:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:260460-260614:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:261306-261447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:262400-262825:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264243-264386:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264750-264890:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:265267-265333:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:265699-265805:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:267054-267142:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:267775-267980:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:268898-269031:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:269700-269792:1:exon

SPCS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SPCS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(273672..>275136)
location: region:273672-275136:-1
so has part: feature:273672-275136:-1:exon
subclass of: SO_0000010

100539366
type: Gene
SIO_000068: ncbigene

position:273672:-1
position: 273672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275136:-1
position: 275136
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273672-275136:-1:exon

SPCS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SPCS1
product: signal peptidase complex subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_019619954.1
SIO_010081: SPCS1
subclass of: SO_0000673
so part of: SPCS1
location: complement(join(273672..273818,274276..274362,274681..274740,274813..>275136))
location: region:273672-275136:-1
so has part: feature:274813-275136:-1:exon
so has part: feature:274681-274740:-1:exon
so has part: feature:274276-274362:-1:exon
so has part: feature:273672-273818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:274813-275136:-1:exon

position:274813:-1
position: 274813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274681-274740:-1:exon

position:274681:-1
position: 274681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274740:-1
position: 274740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274276-274362:-1:exon

position:274276:-1
position: 274276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:274362:-1
position: 274362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:273672-273818:-1:exon

position:273818:-1
position: 273818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPCS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SPCS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptidase complex subunit 1
translation: ARRRLPVSLRLHGREAVCAAISGEEPGVRGEGESESEEEEEEEEEEEEEENDDHEDEDEEREQEREQEQAKASEEDEEREHREQTSEEDEEPFPATMLDVFRSIPTQMDYKGQKLAEQIFQGIILVSAVIGFIFGYVTEQFGWTVYIVMAGFALSCLLTLPPWPMYRRNPLKWLPVQESGTEDKKPADRKPKRHSKS
SIO_010081: SPCS1
subclass of: SO_0000673
so part of: SPCS1
location: complement(join(273696..273818,274276..274362,274681..274740,274813..>275136))
location: region:273696-275136:-1
so has part: feature:274813-275136:-1:exon
so has part: feature:274681-274740:-1:exon
so has part: feature:274276-274362:-1:exon
so has part: feature:273696-273818:-1:exon

XP_019475499.1
type: Protein
SIO_000068: ncbiprotein

position:273696:-1
position: 273696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:274813-275136:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:274681-274740:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:274276-274362:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:273696-273818:-1:exon

GLT8D1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GLT8D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 275790..280632
location: region:275790-280632:1
so has part: feature:275790-280632:1:exon
subclass of: SO_0000010

100539519
type: Gene
SIO_000068: ncbigene

position:275790:1
position: 275790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280632:1
position: 280632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275790-280632:1:exon

GLT8D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GLT8D1
product: glycosyltransferase 8 domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XM_010718265.3
SIO_010081: GLT8D1
subclass of: SO_0000673
so part of: GLT8D1
location: join(275790..276015,276563..276779,277491..277608,278129..278213,278441..278553,278716..278882,279063..279175,279778..280632)
location: region:275790-280632:1
so has part: feature:275790-276015:1:exon
so has part: feature:276563-276779:1:exon
so has part: feature:277491-277608:1:exon
so has part: feature:278129-278213:1:exon
so has part: feature:278441-278553:1:exon
so has part: feature:278716-278882:1:exon
so has part: feature:279063-279175:1:exon
so has part: feature:279778-280632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:275790-276015:1:exon

position:276015:1
position: 276015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276563-276779:1:exon

position:276563:1
position: 276563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276779:1
position: 276779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:277491-277608:1:exon

position:277491:1
position: 277491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277608:1
position: 277608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:278129-278213:1:exon

position:278129:1
position: 278129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278213:1
position: 278213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:278441-278553:1:exon

position:278441:1
position: 278441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278553:1
position: 278553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:278716-278882:1:exon

position:278716:1
position: 278716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:278882:1
position: 278882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:279063-279175:1:exon

position:279063:1
position: 279063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279175:1
position: 279175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:279778-280632:1:exon

position:279778:1
position: 279778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GLT8D1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GLT8D1
product: glycosyltransferase 8 domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_003209953.4
SIO_010081: GLT8D1
subclass of: SO_0000673
so part of: GLT8D1
location: join(276222..276779,277491..277608,278129..278213,278441..278553,278716..278882,279063..279175,279778..280632)
location: region:276222-280632:1
so has part: feature:276222-276779:1:exon
so has part: feature:277491-277608:1:exon
so has part: feature:278129-278213:1:exon
so has part: feature:278441-278553:1:exon
so has part: feature:278716-278882:1:exon
so has part: feature:279063-279175:1:exon
so has part: feature:279778-280632:1:exon

position:276222:1
position: 276222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276222-276779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277491-277608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278129-278213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278441-278553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278716-278882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279063-279175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279778-280632:1:exon

GLT8D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GLT8D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycosyltransferase 8 domain-containing protein 1 isoform X1
translation: MVIIPVFHLWKISMCCHLFSADSNPLGLQPIDFIPAAPQRLTDERNDKEISVVIAASDERLGGAIAAMNSIYRNTKSNVVFYIVTLNDTVDHLRLWLTNTALKNLRYQILNFDPRVLEGKVQADPQKADSIKPLTFARFYLPSLVPHAEKAIYVDDDIIVQDDILELYNTPLKPGHAAAFSDDCDSTTNKVAVRGAGNQYNYIGFLDYKKETIRKLAMKANTCSFNPGVFVANLTEWKLQNITKQLEKWMTLNVAEELYSRTLAGSITTPPLLIVFYKQHSSIDPLWNVRHLGSNAGKRYSPQFVKAAKLLHWNGHFKPWGRTASYAEVWEKWYVPDPTGKFSLIRRHPEAYEAK
SIO_010081: GLT8D1
subclass of: SO_0000673
so part of: GLT8D1
location: join(276499..276779,277491..277608,278129..278213,278441..278553,278716..278882,279063..279175,279778..279968)
location: region:276499-279968:1
so has part: feature:276499-276779:1:exon
so has part: feature:277491-277608:1:exon
so has part: feature:278129-278213:1:exon
so has part: feature:278441-278553:1:exon
so has part: feature:278716-278882:1:exon
so has part: feature:279063-279175:1:exon
so has part: feature:279778-279968:1:exon

XP_003210001.2
type: Protein
SIO_000068: ncbiprotein

position:276499:1
position: 276499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:279968:1
position: 279968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276499-276779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277491-277608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278129-278213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278441-278553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278716-278882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279063-279175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279778-279968:1:exon

GLT8D1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GLT8D1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycosyltransferase 8 domain-containing protein 1 isoform X2
translation: MNSIYRNTKSNVVFYIVTLNDTVDHLRLWLTNTALKNLRYQILNFDPRVLEGKVQADPQKADSIKPLTFARFYLPSLVPHAEKAIYVDDDIIVQDDILELYNTPLKPGHAAAFSDDCDSTTNKVAVRGAGNQYNYIGFLDYKKETIRKLAMKANTCSFNPGVFVANLTEWKLQNITKQLEKWMTLNVAEELYSRTLAGSITTPPLLIVFYKQHSSIDPLWNVRHLGSNAGKRYSPQFVKAAKLLHWNGHFKPWGRTASYAEVWEKWYVPDPTGKFSLIRRHPEAYEAK
SIO_010081: GLT8D1
subclass of: SO_0000673
so part of: GLT8D1
location: join(276700..276779,277491..277608,278129..278213,278441..278553,278716..278882,279063..279175,279778..279968)
location: region:276700-279968:1
so has part: feature:276700-276779:1:exon
so has part: feature:277491-277608:1:exon
so has part: feature:278129-278213:1:exon
so has part: feature:278441-278553:1:exon
so has part: feature:278716-278882:1:exon
so has part: feature:279063-279175:1:exon
so has part: feature:279778-279968:1:exon

XP_010716567.1
type: Protein
SIO_000068: ncbiprotein

position:276700:1
position: 276700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276700-276779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:277491-277608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:278129-278213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278441-278553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:278716-278882:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:279063-279175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:279778-279968:1:exon

GNL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(281756..>289339)
location: region:281756-289339:-1
so has part: feature:281756-289339:-1:exon
subclass of: SO_0000010

100539671
type: Gene
SIO_000068: ncbigene

position:281756:-1
position: 281756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289339:-1
position: 289339
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281756-289339:-1:exon

GNL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GNL3
product: G protein nucleolar 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010718277.2
SIO_010081: GNL3
subclass of: SO_0000673
so part of: GNL3
location: complement(join(281756..282073,282163..282244,282589..282794,283268..283404,283950..284092,284546..284729,285114..285201,285693..285825,286783..286886,287767..287902,288912..288998,289166..>289339))
location: region:281756-289339:-1
so has part: feature:289166-289339:-1:exon
so has part: feature:288912-288998:-1:exon
so has part: feature:287767-287902:-1:exon
so has part: feature:286783-286886:-1:exon
so has part: feature:285693-285825:-1:exon
so has part: feature:285114-285201:-1:exon
so has part: feature:284546-284729:-1:exon
so has part: feature:283950-284092:-1:exon
so has part: feature:283268-283404:-1:exon
so has part: feature:282589-282794:-1:exon
so has part: feature:282163-282244:-1:exon
so has part: feature:281756-282073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:289166-289339:-1:exon

position:289166:-1
position: 289166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:288912-288998:-1:exon

position:288912:-1
position: 288912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288998:-1
position: 288998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:287767-287902:-1:exon

position:287767:-1
position: 287767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287902:-1
position: 287902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:286783-286886:-1:exon

position:286783:-1
position: 286783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:286886:-1
position: 286886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:285693-285825:-1:exon

position:285693:-1
position: 285693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285825:-1
position: 285825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:285114-285201:-1:exon

position:285114:-1
position: 285114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285201:-1
position: 285201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:284546-284729:-1:exon

position:284546:-1
position: 284546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284729:-1
position: 284729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:283950-284092:-1:exon

position:283950:-1
position: 283950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284092:-1
position: 284092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:283268-283404:-1:exon

position:283268:-1
position: 283268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283404:-1
position: 283404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:282589-282794:-1:exon

position:282589:-1
position: 282589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282794:-1
position: 282794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:282163-282244:-1:exon

position:282163:-1
position: 282163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282244:-1
position: 282244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:281756-282073:-1:exon

position:282073:-1
position: 282073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GNL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GNL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein-like 3
translation: HPVPTSHVFYFCWSLLVCDQLEELKQKQKLDRQKELEKRRKLDAKRSAAAIQEQTEGKESSGKSEAKKTKKALDKNAKKSFHSELEKVIETSDVVLEVLDARDPMGCRCPQLEQAITCSGGEKKLLLVLNKIDLVPKENLEKWLNYLKKEFPTVAFKSATLLKDRNMETLSRRRTRIDLSRHTESFGSGCLMKLLQEYGRTQNKAIQVGLVGFPNVGKSSIINSIKKDRVCDVGPARGVTKSMQVVRIDKQMRILDSPSIVADPTNSAVTLALRSIIHTGELCSVNMIKAVDAILNHCNKQQVMMFYSIPDFKNTEELLSLLAQKRGMLKKGGVPDIENTAKSLLCDWTGAKISYHSEPPASRIVPPYLTEDKIAEMQRGFNLKKLEEGNSSTVQALKYPSPASSIVFQSAGMTNGKIVKNKVVEEEESEWEDLETSHEDEDFMETDDDQDSIEEEKEENNVKEDGRTQMTGNAELGMGQTGRADSENEIAENELGNSLPLSLDKTAGEDDAYDFNTDYM
SIO_010081: GNL3
subclass of: SO_0000673
so part of: GNL3
location: complement(join(281985..282073,282163..282244,282589..282794,283268..283404,283950..284092,284546..284729,285114..285201,285693..285825,286783..286886,287767..287902,288912..288998,289166..>289339))
location: region:281985-289339:-1
so has part: feature:289166-289339:-1:exon
so has part: feature:288912-288998:-1:exon
so has part: feature:287767-287902:-1:exon
so has part: feature:286783-286886:-1:exon
so has part: feature:285693-285825:-1:exon
so has part: feature:285114-285201:-1:exon
so has part: feature:284546-284729:-1:exon
so has part: feature:283950-284092:-1:exon
so has part: feature:283268-283404:-1:exon
so has part: feature:282589-282794:-1:exon
so has part: feature:282163-282244:-1:exon
so has part: feature:281985-282073:-1:exon

XP_010716579.1
type: Protein
SIO_000068: ncbiprotein

position:281985:-1
position: 281985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289166-289339:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288912-288998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:287767-287902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:286783-286886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:285693-285825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285114-285201:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:284546-284729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:283950-284092:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:283268-283404:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:282589-282794:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:282163-282244:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:281985-282073:-1:exon

LOC116217190
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217190
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(284171..284243)
location: region:284171-284243:-1
so has part: feature:284171-284243:-1:exon
subclass of: SO_0000578

116217190
type: Gene
SIO_000068: ncbigene

position:284171:-1
position: 284171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284243:-1
position: 284243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284171-284243:-1:exon

LOC116217190
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217190
product: small nucleolar RNA SNORD19
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00569
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161360.1
SIO_010081: LOC116217190
subclass of: SO_0000673
so part of: LOC116217190
location: complement(284171..284243)
location: region:284171-284243:-1
so has part: feature:284171-284243:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284171-284243:-1:exon

LOC116217191
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217191
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(284799..284877)
location: region:284799-284877:-1
so has part: feature:284799-284877:-1:exon
subclass of: SO_0000578

116217191
type: Gene
SIO_000068: ncbigene

position:284799:-1
position: 284799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284877:-1
position: 284877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284799-284877:-1:exon

LOC116217191
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217191
product: small nucleolar RNA SNORD69
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00574
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161361.1
SIO_010081: LOC116217191
subclass of: SO_0000673
so part of: LOC116217191
location: complement(284799..284877)
location: region:284799-284877:-1
so has part: feature:284799-284877:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284799-284877:-1:exon

LOC116217188
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217188
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(285287..285359)
location: region:285287-285359:-1
so has part: feature:285287-285359:-1:exon
subclass of: SO_0000578

116217188
type: Gene
SIO_000068: ncbigene

position:285287:-1
position: 285287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285359:-1
position: 285359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285287-285359:-1:exon

LOC116217188
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217188
product: small nucleolar RNA SNORD19
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00569
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161358.1
SIO_010081: LOC116217188
subclass of: SO_0000673
so part of: LOC116217188
location: complement(285287..285359)
location: region:285287-285359:-1
so has part: feature:285287-285359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:285287-285359:-1:exon

LOC116217189
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217189
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(287636..287708)
location: region:287636-287708:-1
so has part: feature:287636-287708:-1:exon
subclass of: SO_0000578

116217189
type: Gene
SIO_000068: ncbigene

position:287636:-1
position: 287636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287708:-1
position: 287708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:287636-287708:-1:exon

LOC116217189
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217189
product: small nucleolar RNA SNORD19
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00569
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161359.1
SIO_010081: LOC116217189
subclass of: SO_0000673
so part of: LOC116217189
location: complement(287636..287708)
location: region:287636-287708:-1
so has part: feature:287636-287708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:287636-287708:-1:exon

PBRM1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PBRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 291232..351272
location: region:291232-351272:1
so has part: feature:291232-351272:1:exon
subclass of: SO_0000010

100538590
type: Gene
SIO_000068: ncbigene

position:291232:1
position: 291232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351272:1
position: 351272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291232-351272:1:exon

PBRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PBRM1
product: polybromo 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_031555521.1
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(291232..291285,292227..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,302674..302772,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,346569..346639,347778..347994,348358..351272)
location: region:291232-351272:1
so has part: feature:291232-291285:1:exon
so has part: feature:292227-292382:1:exon
so has part: feature:293164-293261:1:exon
so has part: feature:293795-293942:1:exon
so has part: feature:296187-296318:1:exon
so has part: feature:297016-297132:1:exon
so has part: feature:297718-297786:1:exon
so has part: feature:298497-298595:1:exon
so has part: feature:299752-299837:1:exon
so has part: feature:302674-302772:1:exon
so has part: feature:305161-305252:1:exon
so has part: feature:308994-309207:1:exon
so has part: feature:315146-315287:1:exon
so has part: feature:315960-316057:1:exon
so has part: feature:318554-318830:1:exon
so has part: feature:320070-320175:1:exon
so has part: feature:321607-322249:1:exon
so has part: feature:323831-324042:1:exon
so has part: feature:325577-325762:1:exon
so has part: feature:326445-326602:1:exon
so has part: feature:327170-327436:1:exon
so has part: feature:328755-328900:1:exon
so has part: feature:329213-329370:1:exon
so has part: feature:329863-330046:1:exon
so has part: feature:331367-331577:1:exon
so has part: feature:336015-336216:1:exon
so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-351272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291232-291285:1:exon

position:291285:1
position: 291285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292227-292382:1:exon

position:292227:1
position: 292227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:292382:1
position: 292382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:293164-293261:1:exon

position:293164:1
position: 293164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293261:1
position: 293261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:293795-293942:1:exon

position:293795:1
position: 293795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293942:1
position: 293942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296187-296318:1:exon

position:296187:1
position: 296187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296318:1
position: 296318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297016-297132:1:exon

position:297016:1
position: 297016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297132:1
position: 297132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:297718-297786:1:exon

position:297718:1
position: 297718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297786:1
position: 297786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:298497-298595:1:exon

position:298497:1
position: 298497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:298595:1
position: 298595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:299752-299837:1:exon

position:299752:1
position: 299752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299837:1
position: 299837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:302674-302772:1:exon

position:302674:1
position: 302674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:302772:1
position: 302772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:305161-305252:1:exon

position:305161:1
position: 305161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305252:1
position: 305252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:308994-309207:1:exon

position:308994:1
position: 308994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309207:1
position: 309207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:315146-315287:1:exon

position:315146:1
position: 315146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315287:1
position: 315287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:315960-316057:1:exon

position:315960:1
position: 315960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:316057:1
position: 316057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:318554-318830:1:exon

position:318554:1
position: 318554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318830:1
position: 318830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:320070-320175:1:exon

position:320070:1
position: 320070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:320175:1
position: 320175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:321607-322249:1:exon

position:321607:1
position: 321607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322249:1
position: 322249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:323831-324042:1:exon

position:323831:1
position: 323831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324042:1
position: 324042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:325577-325762:1:exon

position:325577:1
position: 325577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325762:1
position: 325762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:326445-326602:1:exon

position:326445:1
position: 326445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326602:1
position: 326602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:327170-327436:1:exon

position:327170:1
position: 327170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327436:1
position: 327436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:328755-328900:1:exon

position:328755:1
position: 328755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328900:1
position: 328900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:329213-329370:1:exon

position:329213:1
position: 329213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329370:1
position: 329370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:329863-330046:1:exon

position:329863:1
position: 329863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330046:1
position: 330046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:331367-331577:1:exon

position:331367:1
position: 331367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331577:1
position: 331577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:336015-336216:1:exon

position:336015:1
position: 336015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336216:1
position: 336216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:346569-346639:1:exon

position:346569:1
position: 346569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346639:1
position: 346639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:347778-347994:1:exon

position:347778:1
position: 347778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347994:1
position: 347994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:348358-351272:1:exon

position:348358:1
position: 348358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PBRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PBRM1
product: polybromo 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_031555522.1
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(291232..291285,292227..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,346569..346639,347778..347994,348358..351272)
location: region:291232-351272:1
so has part: feature:291232-291285:1:exon
so has part: feature:292227-292382:1:exon
so has part: feature:293164-293261:1:exon
so has part: feature:293795-293942:1:exon
so has part: feature:296187-296318:1:exon
so has part: feature:297016-297132:1:exon
so has part: feature:297718-297786:1:exon
so has part: feature:298497-298595:1:exon
so has part: feature:299752-299837:1:exon
so has part: feature:305161-305252:1:exon
so has part: feature:308994-309207:1:exon
so has part: feature:315146-315287:1:exon
so has part: feature:315960-316057:1:exon
so has part: feature:318554-318830:1:exon
so has part: feature:320070-320175:1:exon
so has part: feature:321607-322249:1:exon
so has part: feature:323831-324042:1:exon
so has part: feature:325577-325762:1:exon
so has part: feature:326445-326602:1:exon
so has part: feature:327170-327436:1:exon
so has part: feature:328755-328900:1:exon
so has part: feature:329213-329370:1:exon
so has part: feature:329863-330046:1:exon
so has part: feature:331367-331577:1:exon
so has part: feature:336015-336216:1:exon
so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-351272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:291232-291285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292227-292382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293164-293261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293795-293942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297016-297132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297718-297786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298497-298595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305161-305252:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315146-315287:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:315960-316057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318554-318830:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:321607-322249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:323831-324042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:325577-325762:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:326445-326602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:327170-327436:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:346569-346639:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:347778-347994:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:348358-351272:1:exon

PBRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PBRM1
product: polybromo 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_010718266.3
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(291232..291285,292227..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,302674..302772,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,344169..344324,346569..346639,347778..347994,348358..348530)
location: region:291232-348530:1
so has part: feature:291232-291285:1:exon
so has part: feature:292227-292382:1:exon
so has part: feature:293164-293261:1:exon
so has part: feature:293795-293942:1:exon
so has part: feature:296187-296318:1:exon
so has part: feature:297016-297132:1:exon
so has part: feature:297718-297786:1:exon
so has part: feature:298497-298595:1:exon
so has part: feature:299752-299837:1:exon
so has part: feature:302674-302772:1:exon
so has part: feature:305161-305252:1:exon
so has part: feature:308994-309207:1:exon
so has part: feature:315146-315287:1:exon
so has part: feature:315960-316057:1:exon
so has part: feature:318554-318830:1:exon
so has part: feature:320070-320175:1:exon
so has part: feature:321607-322249:1:exon
so has part: feature:323831-324042:1:exon
so has part: feature:325577-325762:1:exon
so has part: feature:326445-326602:1:exon
so has part: feature:327170-327436:1:exon
so has part: feature:328755-328900:1:exon
so has part: feature:329213-329370:1:exon
so has part: feature:329863-330046:1:exon
so has part: feature:331367-331577:1:exon
so has part: feature:336015-336216:1:exon
so has part: feature:344169-344324:1:exon
so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-348530:1:exon

position:348530:1
position: 348530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291232-291285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292227-292382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293164-293261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293795-293942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297016-297132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297718-297786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298497-298595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302674-302772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305161-305252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:315146-315287:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:315960-316057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318554-318830:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:321607-322249:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:323831-324042:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:325577-325762:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:326445-326602:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:327170-327436:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:344169-344324:1:exon

position:344169:1
position: 344169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344324:1
position: 344324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:346569-346639:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:347778-347994:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:348358-348530:1:exon

PBRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PBRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein polybromo-1 isoform X2
translation: MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDSQELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLRTPSNLTASKLTGPSSQGKGSVGDERNSSNKYFRNKRSAQGDRLSAITMALQYGSESDEDAALAAAARYEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNMRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSCLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKAEEEKHSDTLDDSKVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMSCILGKCAVLSFKDFLCCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEIGEEEGDITETPSMPQLQTPLSSELDIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIGQNVSPMVGTPAPGAGPFGQQIGILGPPGQQAPPPYPGQSPATQPVMQQPSTPMFVSPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNIENV
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(291247..291285,292227..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,302674..302772,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,344169..344324,346569..346639,347778..347994,348358..348530)
location: region:291247-348530:1
so has part: feature:291247-291285:1:exon
so has part: feature:292227-292382:1:exon
so has part: feature:293164-293261:1:exon
so has part: feature:293795-293942:1:exon
so has part: feature:296187-296318:1:exon
so has part: feature:297016-297132:1:exon
so has part: feature:297718-297786:1:exon
so has part: feature:298497-298595:1:exon
so has part: feature:299752-299837:1:exon
so has part: feature:302674-302772:1:exon
so has part: feature:305161-305252:1:exon
so has part: feature:308994-309207:1:exon
so has part: feature:315146-315287:1:exon
so has part: feature:315960-316057:1:exon
so has part: feature:318554-318830:1:exon
so has part: feature:320070-320175:1:exon
so has part: feature:321607-322249:1:exon
so has part: feature:323831-324042:1:exon
so has part: feature:325577-325762:1:exon
so has part: feature:326445-326602:1:exon
so has part: feature:327170-327436:1:exon
so has part: feature:328755-328900:1:exon
so has part: feature:329213-329370:1:exon
so has part: feature:329863-330046:1:exon
so has part: feature:331367-331577:1:exon
so has part: feature:336015-336216:1:exon
so has part: feature:344169-344324:1:exon
so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-348530:1:exon

XP_010716568.3
type: Protein
SIO_000068: ncbiprotein

position:291247:1
position: 291247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:291247-291285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292227-292382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293164-293261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293795-293942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297016-297132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297718-297786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298497-298595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302674-302772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305161-305252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:315146-315287:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:315960-316057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318554-318830:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:321607-322249:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:323831-324042:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:325577-325762:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:326445-326602:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:327170-327436:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:344169-344324:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:346569-346639:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:347778-347994:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:348358-348530:1:exon

PBRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PBRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein polybromo-1 isoform X6
translation: MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDSQELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLRTPSNLTASKLTGPSSQGKGSVGDERNSSNKYFRNKRSAQGDRLSAITMALQYGSESDEDAALAAAARYEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNMRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSCLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKAEEEKHSDTLDDSKVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMSCILGKCAVLSFKDFLCCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEIGEEEGDITETPSMPQLQTPLSSELDIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEGVIGQNVSPMVGTPAPGAGPFGQQIGILGPPGQQAPPPYPGQSPATQPVMQQPSTPMFVSPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNIENV
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(291247..291285,292227..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,302674..302772,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,346569..346639,347778..347994,348358..348530)
location: region:291247-348530:1
so has part: feature:291247-291285:1:exon
so has part: feature:292227-292382:1:exon
so has part: feature:293164-293261:1:exon
so has part: feature:293795-293942:1:exon
so has part: feature:296187-296318:1:exon
so has part: feature:297016-297132:1:exon
so has part: feature:297718-297786:1:exon
so has part: feature:298497-298595:1:exon
so has part: feature:299752-299837:1:exon
so has part: feature:302674-302772:1:exon
so has part: feature:305161-305252:1:exon
so has part: feature:308994-309207:1:exon
so has part: feature:315146-315287:1:exon
so has part: feature:315960-316057:1:exon
so has part: feature:318554-318830:1:exon
so has part: feature:320070-320175:1:exon
so has part: feature:321607-322249:1:exon
so has part: feature:323831-324042:1:exon
so has part: feature:325577-325762:1:exon
so has part: feature:326445-326602:1:exon
so has part: feature:327170-327436:1:exon
so has part: feature:328755-328900:1:exon
so has part: feature:329213-329370:1:exon
so has part: feature:329863-330046:1:exon
so has part: feature:331367-331577:1:exon
so has part: feature:336015-336216:1:exon
so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-348530:1:exon

XP_031411381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291247-291285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292227-292382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293164-293261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293795-293942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297016-297132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297718-297786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298497-298595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:302674-302772:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:305161-305252:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:315146-315287:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:315960-316057:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:318554-318830:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:321607-322249:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:323831-324042:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:325577-325762:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:326445-326602:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:327170-327436:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:346569-346639:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:347778-347994:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:348358-348530:1:exon

PBRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PBRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein polybromo-1 isoform X7
translation: MRRLAFRGAGCTLKKLDSMGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDSQELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLSNKRSAQGDRLSAITMALQYGSESDEDAALAAAARYEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNMRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSCLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKAEEEKHSDTLDDSKVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMSCILGKCAVLSFKDFLCCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEIGEEEGDITETPSMPQLQTPLSSELDIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEGVIGQNVSPMVGTPAPGAGPFGQQIGILGPPGQQAPPPYPGQSPATQPVMQQPSTPMFVSPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNIENV
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(291247..291285,292227..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,346569..346639,347778..347994,348358..348530)
location: region:291247-348530:1
so has part: feature:291247-291285:1:exon
so has part: feature:292227-292382:1:exon
so has part: feature:293164-293261:1:exon
so has part: feature:293795-293942:1:exon
so has part: feature:296187-296318:1:exon
so has part: feature:297016-297132:1:exon
so has part: feature:297718-297786:1:exon
so has part: feature:298497-298595:1:exon
so has part: feature:299752-299837:1:exon
so has part: feature:305161-305252:1:exon
so has part: feature:308994-309207:1:exon
so has part: feature:315146-315287:1:exon
so has part: feature:315960-316057:1:exon
so has part: feature:318554-318830:1:exon
so has part: feature:320070-320175:1:exon
so has part: feature:321607-322249:1:exon
so has part: feature:323831-324042:1:exon
so has part: feature:325577-325762:1:exon
so has part: feature:326445-326602:1:exon
so has part: feature:327170-327436:1:exon
so has part: feature:328755-328900:1:exon
so has part: feature:329213-329370:1:exon
so has part: feature:329863-330046:1:exon
so has part: feature:331367-331577:1:exon
so has part: feature:336015-336216:1:exon
so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-348530:1:exon

XP_031411382.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:291247-291285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292227-292382:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293164-293261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293795-293942:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297016-297132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:297718-297786:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:298497-298595:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305161-305252:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315146-315287:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:315960-316057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318554-318830:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:321607-322249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:323831-324042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:325577-325762:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:326445-326602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:327170-327436:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:346569-346639:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:347778-347994:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:348358-348530:1:exon

PBRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PBRM1
product: polybromo 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019619995.1
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(292227..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,302674..302772,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,340232..340390,344169..344324,346569..346639,347778..347994,348358..351272)
location: region:292227-351272:1
so has part: feature:292227-292382:1:exon
so has part: feature:293164-293261:1:exon
so has part: feature:293795-293942:1:exon
so has part: feature:296187-296318:1:exon
so has part: feature:297016-297132:1:exon
so has part: feature:297718-297786:1:exon
so has part: feature:298497-298595:1:exon
so has part: feature:299752-299837:1:exon
so has part: feature:302674-302772:1:exon
so has part: feature:305161-305252:1:exon
so has part: feature:308994-309207:1:exon
so has part: feature:315146-315287:1:exon
so has part: feature:315960-316057:1:exon
so has part: feature:318554-318830:1:exon
so has part: feature:320070-320175:1:exon
so has part: feature:321607-322249:1:exon
so has part: feature:323831-324042:1:exon
so has part: feature:325577-325762:1:exon
so has part: feature:326445-326602:1:exon
so has part: feature:327170-327436:1:exon
so has part: feature:328755-328900:1:exon
so has part: feature:329213-329370:1:exon
so has part: feature:329863-330046:1:exon
so has part: feature:331367-331577:1:exon
so has part: feature:336015-336216:1:exon
so has part: feature:340232-340390:1:exon
so has part: feature:344169-344324:1:exon
so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-351272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292227-292382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293164-293261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293795-293942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297016-297132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297718-297786:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298497-298595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:302674-302772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305161-305252:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315146-315287:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:315960-316057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318554-318830:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:321607-322249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:323831-324042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:325577-325762:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:326445-326602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:327170-327436:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:340232-340390:1:exon

position:340232:1
position: 340232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:340390:1
position: 340390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:344169-344324:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:346569-346639:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:347778-347994:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:348358-351272:1:exon

PBRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PBRM1
product: polybromo 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_031555520.1
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(292227..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,302674..302772,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,344169..344324,346569..346639,347778..347994,348358..351272)
location: region:292227-351272:1
so has part: feature:292227-292382:1:exon
so has part: feature:293164-293261:1:exon
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so has part: feature:296187-296318:1:exon
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so has part: feature:315960-316057:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 2
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urn:…
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urn:…
SIO_000300: 8
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SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:305161-305252:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 12
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urn:…
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urn:…
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urn:…
SIO_000300: 16
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urn:…
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urn:…
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SIO_000628: feature:325577-325762:1:exon

urn:…
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urn:…
SIO_000300: 21
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 26
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urn:…
SIO_000300: 27
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urn:…
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urn:…
SIO_000300: 29
SIO_000628: feature:348358-351272:1:exon

PBRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PBRM1
product: polybromo 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 190 samples with support for all annotated introns
transcript id: XM_010718267.1
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(292227..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,344169..344324,346569..346639,347778..347994,348358..351272)
location: region:292227-351272:1
so has part: feature:292227-292382:1:exon
so has part: feature:293164-293261:1:exon
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so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-351272:1:exon

urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 15
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urn:…
SIO_000300: 16
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SIO_000300: 22
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urn:…
SIO_000300: 23
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SIO_000300: 24
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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:346569-346639:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:347778-347994:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:348358-351272:1:exon

PBRM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PBRM1
product: polybromo 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019619994.2
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(292227..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,302674..302772,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,339076..339269)
location: region:292227-339269:1
so has part: feature:292227-292382:1:exon
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so has part: feature:336015-336216:1:exon
so has part: feature:339076-339269:1:exon

position:339269:1
position: 339269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292227-292382:1:exon

urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:297718-297786:1:exon

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SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
SIO_000628: feature:315960-316057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318554-318830:1:exon

urn:…
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SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:321607-322249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:323831-324042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:325577-325762:1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 23
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:339076-339269:1:exon

position:339076:1
position: 339076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PBRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PBRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein polybromo-1 isoform X5
translation: MGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDSQELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLRTPSNLTASKLTGPSSQGKGSVGDERNSSNKYFRNKRSAQGDRLSAITMALQYGSESDEDAALAAAARYEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNMRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSCLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKAEEEKHSDTLDDSKVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMSCILGKCAVLSFKDFLCCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEIGEEEGDITETPSMPQLQTPLSSELDIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEERAAKVAEQQERERAAQQQNPSPRAGTPVGALMGVVPPPTPMGMLNQQLTPVAGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIGQNVSPMVGTPAPGAGPFGQQIGILGPPGQQAPPPYPGQSPATQPVMQQPSTPMFVSPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNIENV
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(292242..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,302674..302772,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,340232..340390,344169..344324,346569..346639,347778..347994,348358..348530)
location: region:292242-348530:1
so has part: feature:292242-292382:1:exon
so has part: feature:293164-293261:1:exon
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so has part: feature:328755-328900:1:exon
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so has part: feature:336015-336216:1:exon
so has part: feature:340232-340390:1:exon
so has part: feature:344169-344324:1:exon
so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-348530:1:exon

XP_019475540.1
type: Protein
SIO_000068: ncbiprotein

position:292242:1
position: 292242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292242-292382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293164-293261:1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297016-297132:1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:298497-298595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:302674-302772:1:exon

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SIO_000628: feature:305161-305252:1:exon

urn:…
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SIO_000628: feature:315146-315287:1:exon

urn:…
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urn:…
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SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:321607-322249:1:exon

urn:…
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urn:…
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SIO_000300: 19
SIO_000628: feature:326445-326602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:327170-327436:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:340232-340390:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:344169-344324:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:346569-346639:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:347778-347994:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:348358-348530:1:exon

PBRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PBRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein polybromo-1 isoform X1
translation: MGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDSQELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLRTPSNLTASKLTGPSSQGKGSVGDERNSSNKYFRNKRSAQGDRLSAITMALQYGSESDEDAALAAAARYEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNMRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSCLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKAEEEKHSDTLDDSKVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMSCILGKCAVLSFKDFLCCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEIGEEEGDITETPSMPQLQTPLSSELDIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIGQNVSPMVGTPAPGAGPFGQQIGILGPPGQQAPPPYPGQSPATQPVMQQPSTPMFVSPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNIENV
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(292242..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,302674..302772,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,344169..344324,346569..346639,347778..347994,348358..348530)
location: region:292242-348530:1
so has part: feature:292242-292382:1:exon
so has part: feature:293164-293261:1:exon
so has part: feature:293795-293942:1:exon
so has part: feature:296187-296318:1:exon
so has part: feature:297016-297132:1:exon
so has part: feature:297718-297786:1:exon
so has part: feature:298497-298595:1:exon
so has part: feature:299752-299837:1:exon
so has part: feature:302674-302772:1:exon
so has part: feature:305161-305252:1:exon
so has part: feature:308994-309207:1:exon
so has part: feature:315146-315287:1:exon
so has part: feature:315960-316057:1:exon
so has part: feature:318554-318830:1:exon
so has part: feature:320070-320175:1:exon
so has part: feature:321607-322249:1:exon
so has part: feature:323831-324042:1:exon
so has part: feature:325577-325762:1:exon
so has part: feature:326445-326602:1:exon
so has part: feature:327170-327436:1:exon
so has part: feature:328755-328900:1:exon
so has part: feature:329213-329370:1:exon
so has part: feature:329863-330046:1:exon
so has part: feature:331367-331577:1:exon
so has part: feature:336015-336216:1:exon
so has part: feature:344169-344324:1:exon
so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-348530:1:exon

XP_031411380.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292242-292382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293164-293261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293795-293942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297016-297132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297718-297786:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298497-298595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:302674-302772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305161-305252:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315146-315287:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:315960-316057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318554-318830:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:321607-322249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:323831-324042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:325577-325762:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:326445-326602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:327170-327436:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:344169-344324:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:346569-346639:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:347778-347994:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:348358-348530:1:exon

PBRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PBRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein polybromo-1 isoform X3
translation: MGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDSQELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLSNKRSAQGDRLSAITMALQYGSESDEDAALAAAARYEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNMRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSCLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKAEEEKHSDTLDDSKVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMSCILGKCAVLSFKDFLCCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEIGEEEGDITETPSMPQLQTPLSSELDIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEGMISGYPPVLPPLQGPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIGQNVSPMVGTPAPGAGPFGQQIGILGPPGQQAPPPYPGQSPATQPVMQQPSTPMFVSPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNIENV
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(292242..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,344169..344324,346569..346639,347778..347994,348358..348530)
location: region:292242-348530:1
so has part: feature:292242-292382:1:exon
so has part: feature:293164-293261:1:exon
so has part: feature:293795-293942:1:exon
so has part: feature:296187-296318:1:exon
so has part: feature:297016-297132:1:exon
so has part: feature:297718-297786:1:exon
so has part: feature:298497-298595:1:exon
so has part: feature:299752-299837:1:exon
so has part: feature:305161-305252:1:exon
so has part: feature:308994-309207:1:exon
so has part: feature:315146-315287:1:exon
so has part: feature:315960-316057:1:exon
so has part: feature:318554-318830:1:exon
so has part: feature:320070-320175:1:exon
so has part: feature:321607-322249:1:exon
so has part: feature:323831-324042:1:exon
so has part: feature:325577-325762:1:exon
so has part: feature:326445-326602:1:exon
so has part: feature:327170-327436:1:exon
so has part: feature:328755-328900:1:exon
so has part: feature:329213-329370:1:exon
so has part: feature:329863-330046:1:exon
so has part: feature:331367-331577:1:exon
so has part: feature:336015-336216:1:exon
so has part: feature:344169-344324:1:exon
so has part: feature:346569-346639:1:exon
so has part: feature:347778-347994:1:exon
so has part: feature:348358-348530:1:exon

XP_010716569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:292242-292382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293164-293261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293795-293942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297016-297132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297718-297786:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298497-298595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305161-305252:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:315146-315287:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315960-316057:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:318554-318830:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:321607-322249:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:323831-324042:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:325577-325762:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:326445-326602:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:327170-327436:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:344169-344324:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:346569-346639:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:347778-347994:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:348358-348530:1:exon

PBRM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PBRM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein polybromo-1 isoform X4
translation: MGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLLFNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEEGHDSQELSSPGYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRLRTPSNLTASKLTGPSSQGKGSVGDERNSSNKYFRNKRSAQGDRLSAITMALQYGSESDEDAALAAAARYEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFQLPSKKKYPDYYQQIKTPISLQQIRAKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQQVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNMRKQRMKILYNAVLEARESGTGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIDDMKLMFRNARHYNEEGSQVYNDAHMLEKILKEKRKELGPLPEDDDVASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYITIKKPVDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSCLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSFKKIKLWTMPVSSVRFVPRDVPLPVVRVASVFANTDKAEEEKHSDTLDDSKVGESILHLEKDKEDVPVEMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMSCILGKCAVLSFKDFLCCRPTEISENDVFLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQQLEAKFAELEGGDEDMEEIGEEEGDITETPSMPQLQTPLSSELDIMPYTPPQSTPKSVKGSTKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEVTVLIFHQLQENFQPCSHCC
SIO_010081: PBRM1
subclass of: SO_0000673
so part of: PBRM1
location: join(292242..292382,293164..293261,293795..293942,296187..296318,297016..297132,297718..297786,298497..298595,299752..299837,302674..302772,305161..305252,308994..309207,315146..315287,315960..316057,318554..318830,320070..320175,321607..322249,323831..324042,325577..325762,326445..326602,327170..327436,328755..328900,329213..329370,329863..330046,331367..331577,336015..336216,339076..339137)
location: region:292242-339137:1
so has part: feature:292242-292382:1:exon
so has part: feature:293164-293261:1:exon
so has part: feature:293795-293942:1:exon
so has part: feature:296187-296318:1:exon
so has part: feature:297016-297132:1:exon
so has part: feature:297718-297786:1:exon
so has part: feature:298497-298595:1:exon
so has part: feature:299752-299837:1:exon
so has part: feature:302674-302772:1:exon
so has part: feature:305161-305252:1:exon
so has part: feature:308994-309207:1:exon
so has part: feature:315146-315287:1:exon
so has part: feature:315960-316057:1:exon
so has part: feature:318554-318830:1:exon
so has part: feature:320070-320175:1:exon
so has part: feature:321607-322249:1:exon
so has part: feature:323831-324042:1:exon
so has part: feature:325577-325762:1:exon
so has part: feature:326445-326602:1:exon
so has part: feature:327170-327436:1:exon
so has part: feature:328755-328900:1:exon
so has part: feature:329213-329370:1:exon
so has part: feature:329863-330046:1:exon
so has part: feature:331367-331577:1:exon
so has part: feature:336015-336216:1:exon
so has part: feature:339076-339137:1:exon

XP_019475539.1
type: Protein
SIO_000068: ncbiprotein

position:339137:1
position: 339137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292242-292382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:293164-293261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:293795-293942:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:296187-296318:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:297016-297132:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297718-297786:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:298497-298595:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299752-299837:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:302674-302772:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305161-305252:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:308994-309207:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:315146-315287:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:315960-316057:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:318554-318830:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:320070-320175:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:321607-322249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:323831-324042:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:325577-325762:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:326445-326602:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:327170-327436:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:328755-328900:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:329213-329370:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:329863-330046:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:331367-331577:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:336015-336216:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:339076-339137:1:exon

SMIM4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SMIM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354373..>354949)
location: region:354373-354949:-1
so has part: feature:354373-354949:-1:exon
subclass of: SO_0000010

100539828
type: Gene
SIO_000068: ncbigene

position:354373:-1
position: 354373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:354949:-1
position: 354949
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354373-354949:-1:exon

SMIM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SMIM4
product: small integral membrane protein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003209955.4
SIO_010081: SMIM4
subclass of: SO_0000673
so part of: SMIM4
location: complement(join(354373..354668,354820..>354949))
location: region:354373-354949:-1
so has part: feature:354820-354949:-1:exon
so has part: feature:354373-354668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:354820-354949:-1:exon

position:354820:-1
position: 354820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354373-354668:-1:exon

position:354668:-1
position: 354668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMIM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SMIM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 4
translation: RRLRRLVPGRERFGAYRLLPFFFVLGGAMEWFMINVRIGKETFYDVYRRKRSERQYEARMEKSES
SIO_010081: SMIM4
subclass of: SO_0000673
so part of: SMIM4
location: complement(join(354601..354668,354820..>354949))
location: region:354601-354949:-1
so has part: feature:354820-354949:-1:exon
so has part: feature:354601-354668:-1:exon

XP_003210003.2
type: Protein
SIO_000068: ncbiprotein

position:354601:-1
position: 354601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354820-354949:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354601-354668:-1:exon

NT5DC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NT5DC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 355057..379819
location: region:355057-379819:1
so has part: feature:355057-379819:1:exon
subclass of: SO_0000010

100539982
type: Gene
SIO_000068: ncbigene

position:355057:1
position: 355057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379819:1
position: 379819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355057-379819:1:exon

NT5DC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NT5DC2
product: 5'-nucleotidase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_003209956.2
SIO_010081: NT5DC2
subclass of: SO_0000673
so part of: NT5DC2
location: join(355057..355126,358226..358410,359139..359213,360858..360913,362629..362722,367695..367823,371773..371833,372449..372551,373008..373109,374126..374207,377290..377376,378261..378401,378648..378712,379472..379819)
location: region:355057-379819:1
so has part: feature:355057-355126:1:exon
so has part: feature:358226-358410:1:exon
so has part: feature:359139-359213:1:exon
so has part: feature:360858-360913:1:exon
so has part: feature:362629-362722:1:exon
so has part: feature:367695-367823:1:exon
so has part: feature:371773-371833:1:exon
so has part: feature:372449-372551:1:exon
so has part: feature:373008-373109:1:exon
so has part: feature:374126-374207:1:exon
so has part: feature:377290-377376:1:exon
so has part: feature:378261-378401:1:exon
so has part: feature:378648-378712:1:exon
so has part: feature:379472-379819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355057-355126:1:exon

position:355126:1
position: 355126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358226-358410:1:exon

position:358226:1
position: 358226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358410:1
position: 358410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:359139-359213:1:exon

position:359139:1
position: 359139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359213:1
position: 359213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:360858-360913:1:exon

position:360858:1
position: 360858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360913:1
position: 360913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:362629-362722:1:exon

position:362629:1
position: 362629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362722:1
position: 362722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:367695-367823:1:exon

position:367695:1
position: 367695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367823:1
position: 367823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:371773-371833:1:exon

position:371773:1
position: 371773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:371833:1
position: 371833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:372449-372551:1:exon

position:372449:1
position: 372449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372551:1
position: 372551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:373008-373109:1:exon

position:373008:1
position: 373008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373109:1
position: 373109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:374126-374207:1:exon

position:374126:1
position: 374126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374207:1
position: 374207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:377290-377376:1:exon

position:377290:1
position: 377290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377376:1
position: 377376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:378261-378401:1:exon

position:378261:1
position: 378261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378401:1
position: 378401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:378648-378712:1:exon

position:378648:1
position: 378648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378712:1
position: 378712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:379472-379819:1:exon

position:379472:1
position: 379472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NT5DC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NT5DC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-nucleotidase domain-containing protein 2 isoform X2
translation: MKKLVYDLLPPGVCNLLNPAAIYANNEISLGDVEIYGFDYDYTLAQYSNLLHSMIFNTARDILIEQFKYPEGLGKYDYIPGFAIRGLHYDVQKSLLMKIDAFHYVQLGTAYRGLKPVPDEEVIELYGGTQHIPLYQMSDFYGKGPSLKQFMDIFSLPEMTLLSSVIDYFITHGIEFDQVHLYKDISDAIRDVHVKGVMYKWIEKDMEQYILHGDEIYAVLNRLVNHKKKLFLITNSPFSFVDKGMKHMVGKNWRDLFDMVIVQADKPNFFTDRRKPFRKLDDNGSLQWDKINQLEKGKIYKEGNLFDFLRLTGWRGSKVLYFGDHLYSDLADLMLRHGWRTGAIVPELETEIRIINTEQYMHSLTWQQALTGLLERMQMYQDAESKQVLLEWMKERQEIRSLTKNLFNPQFGSIFRTFHNPTYFSRRLVRFSDIYMASISCLLNYDVNFTFYPRRTPLQHEAPLWMDQLCTGCMKTPFLEEMVHIR
SIO_010081: NT5DC2
subclass of: SO_0000673
so part of: NT5DC2
location: join(355108..355126,358226..358410,359139..359213,360858..360913,362629..362722,367695..367823,371773..371833,372449..372551,373008..373109,374126..374207,377290..377376,378261..378401,378648..378712,379472..379733)
location: region:355108-379733:1
so has part: feature:355108-355126:1:exon
so has part: feature:358226-358410:1:exon
so has part: feature:359139-359213:1:exon
so has part: feature:360858-360913:1:exon
so has part: feature:362629-362722:1:exon
so has part: feature:367695-367823:1:exon
so has part: feature:371773-371833:1:exon
so has part: feature:372449-372551:1:exon
so has part: feature:373008-373109:1:exon
so has part: feature:374126-374207:1:exon
so has part: feature:377290-377376:1:exon
so has part: feature:378261-378401:1:exon
so has part: feature:378648-378712:1:exon
so has part: feature:379472-379733:1:exon

XP_003210004.2
type: Protein
SIO_000068: ncbiprotein

position:355108:1
position: 355108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379733:1
position: 379733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355108-355126:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358226-358410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359139-359213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360858-360913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362629-362722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:367695-367823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371773-371833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:372449-372551:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373008-373109:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374126-374207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:377290-377376:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:378261-378401:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:378648-378712:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379472-379733:1:exon

NT5DC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NT5DC2
product: 5'-nucleotidase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 101 samples with support for all annotated introns
transcript id: XM_010718269.3
SIO_010081: NT5DC2
subclass of: SO_0000673
so part of: NT5DC2
location: join(356874..357123,358226..358410,359139..359213,360858..360913,362629..362722,367695..367823,371773..371833,372449..372551,373008..373109,374126..374207,377290..377376,378261..378401,378648..378712,379472..379819)
location: region:356874-379819:1
so has part: feature:356874-357123:1:exon
so has part: feature:358226-358410:1:exon
so has part: feature:359139-359213:1:exon
so has part: feature:360858-360913:1:exon
so has part: feature:362629-362722:1:exon
so has part: feature:367695-367823:1:exon
so has part: feature:371773-371833:1:exon
so has part: feature:372449-372551:1:exon
so has part: feature:373008-373109:1:exon
so has part: feature:374126-374207:1:exon
so has part: feature:377290-377376:1:exon
so has part: feature:378261-378401:1:exon
so has part: feature:378648-378712:1:exon
so has part: feature:379472-379819:1:exon

position:356874:1
position: 356874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356874-357123:1:exon

position:357123:1
position: 357123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358226-358410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359139-359213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360858-360913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362629-362722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:367695-367823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371773-371833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:372449-372551:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373008-373109:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374126-374207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:377290-377376:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:378261-378401:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:378648-378712:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379472-379819:1:exon

NT5DC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NT5DC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-nucleotidase domain-containing protein 2 isoform X1
translation: MARHSHCSASDLPSSPCLTKSHQLPWLLSTAFLQLAFFISFFSFSFFFFFNLSKPHFSYKRSIVLLGLSERVVPNIANDLLPPGVCNLLNPAAIYANNEISLGDVEIYGFDYDYTLAQYSNLLHSMIFNTARDILIEQFKYPEGLGKYDYIPGFAIRGLHYDVQKSLLMKIDAFHYVQLGTAYRGLKPVPDEEVIELYGGTQHIPLYQMSDFYGKGPSLKQFMDIFSLPEMTLLSSVIDYFITHGIEFDQVHLYKDISDAIRDVHVKGVMYKWIEKDMEQYILHGDEIYAVLNRLVNHKKKLFLITNSPFSFVDKGMKHMVGKNWRDLFDMVIVQADKPNFFTDRRKPFRKLDDNGSLQWDKINQLEKGKIYKEGNLFDFLRLTGWRGSKVLYFGDHLYSDLADLMLRHGWRTGAIVPELETEIRIINTEQYMHSLTWQQALTGLLERMQMYQDAESKQVLLEWMKERQEIRSLTKNLFNPQFGSIFRTFHNPTYFSRRLVRFSDIYMASISCLLNYDVNFTFYPRRTPLQHEAPLWMDQLCTGCMKTPFLEEMVHIR
SIO_010081: NT5DC2
subclass of: SO_0000673
so part of: NT5DC2
location: join(356889..357123,358226..358410,359139..359213,360858..360913,362629..362722,367695..367823,371773..371833,372449..372551,373008..373109,374126..374207,377290..377376,378261..378401,378648..378712,379472..379733)
location: region:356889-379733:1
so has part: feature:356889-357123:1:exon
so has part: feature:358226-358410:1:exon
so has part: feature:359139-359213:1:exon
so has part: feature:360858-360913:1:exon
so has part: feature:362629-362722:1:exon
so has part: feature:367695-367823:1:exon
so has part: feature:371773-371833:1:exon
so has part: feature:372449-372551:1:exon
so has part: feature:373008-373109:1:exon
so has part: feature:374126-374207:1:exon
so has part: feature:377290-377376:1:exon
so has part: feature:378261-378401:1:exon
so has part: feature:378648-378712:1:exon
so has part: feature:379472-379733:1:exon

XP_010716571.3
type: Protein
SIO_000068: ncbiprotein

position:356889:1
position: 356889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356889-357123:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358226-358410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:359139-359213:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:360858-360913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362629-362722:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:367695-367823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:371773-371833:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:372449-372551:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:373008-373109:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:374126-374207:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:377290-377376:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:378261-378401:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:378648-378712:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:379472-379733:1:exon

STAB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: STAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(380366..433300)
location: region:380366-433300:-1
so has part: feature:380366-433300:-1:exon
subclass of: SO_0000010

100540136
type: Gene
SIO_000068: ncbigene

position:380366:-1
position: 380366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:433300:-1
position: 433300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380366-433300:-1:exon

STAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: STAB1
product: stabilin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010718278.3
SIO_010081: STAB1
subclass of: SO_0000673
so part of: STAB1
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SIO_000300: 62
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position:383025:-1
position: 383025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:383158:-1
position: 383158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:382523-382737:-1:exon

position:382523:-1
position: 382523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382737:-1
position: 382737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 64
SIO_000628: feature:380366-380369:-1:exon

position:380369:-1
position: 380369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

STAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: STAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: stabilin-1
translation: MKMHPSGLLFFFLAACFIPTADCETPKLKSMKCNVKMTFTSSTSCTSCAVVSRTSCPKGWMRTTEGLAVRGCRYTVKLGENTLSLSGCYHICKKEIEEKKCCPGFWGTECYECPGGSENPCNGHGTCLDGLQRNGTCICKEQYSGFACQNCRDENRFGPDCQSVCDCVHGECISGVTGNRSCTCYGGYTGPRCDQELALCRGVRCEANSECVVKDGTAMCNCKLGYRKSGSACVAQDPCTSSPCSPFAVCKFLGPRKYECTCKEGYQGDGRVCQPINPCVDNNGGCPEISTNCIYKGPGKASCVCKPGMIARLPSLECSSFANDCQTYFCDFSSKCEINSHGNPSCVCKEGEIGDGRSCYRDLMSEINKHNSRGMFSRKLNVARKMFVSGCSVLLTKYGPFTVFVPSLLPINDKMELNGTTAADLCRMHIVPGLHLIEDMVKAKTMWTLSGHRLTFSNQGHTKSFRYQDVPGELYNVLQSDLPAANGIIHIVDTLRKKSNADNIGNPQKTIGEILASTEIFSRFETILENCGLPAILDGPGPFTVFVPSNDGVDKLRDGRLIYLFTEGINKLQELVKHHIYTSAAITVEKLIMTPHIVTMANQILSINISADGRIMMDDSEIPLNMRNIVASNGIIHTVDGIFIPPSIIPILPHRCNEEQHKIVTGSCVDCEALNSSVCPPGSKEMELTPFPKECVYIHDPQGLNVLKRGCARYCNQTIVKPGCCEGFFGPDCTPCPGGYTNPCYGRGNCSDGIDGNGNCQCFEGFKGIACHICSNPNKHGENCDEDCGCVHGVCDNRPGSGGVCQSWSCKEGYTGKFCDKTSKNCGPSGLSQYCHQNAVCSLSDTARCICRDGYEGDGFSCQPIDLCSQPERGGCSLNALCTSTGPGNATCQCNVGWTGDGKACVAIDNCMQESRGNCHINADCIYIGPGQSKCVCKRGYAGDGHNCDAINPCLMDNGGCHDLAMCVPLGGGERSCACPEGYVGDGMTCYGDVLKELARSSHFAGFYDWVKKSLFSIPAGTNVTVLVPSEEAIKSLNKSEKDFWLTPYMLPFLVRAHFLEGVFTDEKLRKYNRPELPTLNPRIKWQINTESGVFTIQNASLVVSDIPASNGIIHILSKVLLPRLGDVPPSPPGLQKQLDAVASFSTFKKLLEQYQLIGKIESSEKYTVFVPGNNSIEEYCHAANVTQLDNETVQFHIVLGEKLLPADLRSGVHKSSMLGLSYWLMFYQNSTQKFVNNIPLDGKFFETRNGILIGVSQVLQIQKNRCTANTTTIQRSRCGKCEKGIKCPPGSVLVEFPGSKNLPMCNLRSGDTGCHFTCAKVSLKSVCCPGYYGHMCEMCPGKPGQWCSGNGECLDGIEGSGECQCLEGFHGTACEMCEVGRYGADCKSECACDNGICNDGLQGDGSCDCLPGWKGPSCQERIEVDLCNSTCHQMANCLNASADSPPMCFCSAGYTGNGTHCTEIDPCTIDHGGCSIHAVCTKVSPGERTCVCKEGYAGDGTLCREIDLCLESSGDCHTNAECVKTGPGKIACNCLPGYSGDGVRQCNPINLCEQNNGGCSPFGLCKYTGPGTRNCSCSWHSIGDGFTCRGKVYQELARIEDASVFFKMILAEKNKELSGAGPFTVFVPRADFIGNSTTFEEWKSRGLLQELLRYHMVGCQKLLLSDLETQESLTSLSGHTIKITEKENSIYLNDEAEVVMSDIVGVNGVIHFINKVLIPSDLVSRNVSSHISQLNITEAAETFGYTIYSKLLKDAELLPLISNPLHRPFTMLWPTDAAFNALPEKRQQWLYHREHRDKLASYLKAHMIRGTKIVAGNMPQVNSIRTMHGSTVSFSCSRTHVGDLLVGNGDAVIIQRHMEFDGGIAYGIDRLLEPPDLGSRCDEFISVELQGSMESCGPCGFEPPCPAGSVQRGGTWGCHYFENQLFRNTFLFRHNHPLRPSWSFSPWEPFRRHFSSRGPLKRGCRRKCISTQWAPQCCANHYGRDCQACPGGLEAPCGN…
SIO_010081: STAB1
subclass of: SO_0000673
so part of: STAB1
location: complement(join(380366..380369,382523..382737,383025..383158,383245..383389,383892..384085,384193..384300,384463..384567,385036..385185,385634..385859,386346..386411,386567..386713,387133..387219,387869..388045,388139..388198,388806..388943,389099..389245,390076..390159,390272..390319,391264..391383,391733..391807,392170..392243,392911..393036,393770..393849,395109..395154,395922..396017,396421..396616,397610..397696,398497..398553,399012..399140,399292..399423,399936..400043,400515..400616,400983..401060,401284..401395,401765..401895,402331..402378,402989..403084,403464..403559,404405..404563,405423..405516,405749..405932,406450..406561,406821..406907,407943..408044,409462..409524,410286..410444,410742..410822,411881..411934,412317..412430,413199..413261,415060..415206,417126..417248,418392..418483,419424..419551,420619..420752,421049..421245,421736..421852,422152..422247,422945..423014,424019..424104,424645..424760,426598..426734,432031..432111))
location: region:380366-432111:-1
so has part: feature:432031-432111:-1:exon
so has part: feature:426598-426734:-1:exon
so has part: feature:424645-424760:-1:exon
so has part: feature:424019-424104:-1:exon
so has part: feature:422945-423014:-1:exon
so has part: feature:422152-422247:-1:exon
so has part: feature:421736-421852:-1:exon
so has part: feature:421049-421245:-1:exon
so has part: feature:420619-420752:-1:exon
so has part: feature:419424-419551:-1:exon
so has part: feature:418392-418483:-1:exon
so has part: feature:417126-417248:-1:exon
so has part: feature:415060-415206:-1:exon
so has part: feature:413199-413261:-1:exon
so has part: feature:412317-412430:-1:exon
so has part: feature:411881-411934:-1:exon
so has part: feature:410742-410822:-1:exon
so has part: feature:410286-410444:-1:exon
so has part: feature:409462-409524:-1:exon
so has part: feature:407943-408044:-1:exon
so has part: feature:406821-406907:-1:exon
so has part: feature:406450-406561:-1:exon
so has part: feature:405749-405932:-1:exon
so has part: feature:405423-405516:-1:exon
so has part: feature:404405-404563:-1:exon
so has part: feature:403464-403559:-1:exon
so has part: feature:402989-403084:-1:exon
so has part: feature:402331-402378:-1:exon
so has part: feature:401765-401895:-1:exon
so has part: feature:401284-401395:-1:exon
so has part: feature:400983-401060:-1:exon
so has part: feature:400515-400616:-1:exon
so has part: feature:399936-400043:-1:exon
so has part: feature:399292-399423:-1:exon
so has part: feature:399012-399140:-1:exon
so has part: feature:398497-398553:-1:exon
so has part: feature:397610-397696:-1:exon
so has part: feature:396421-396616:-1:exon
so has part: feature:395922-396017:-1:exon
so has part: feature:395109-395154:-1:exon
so has part: feature:393770-393849:-1:exon
so has part: feature:392911-393036:-1:exon
so has part: feature:392170-392243:-1:exon
so has part: feature:391733-391807:-1:exon
so has part: feature:391264-391383:-1:exon
so has part: feature:390272-390319:-1:exon
so has part: feature:390076-390159:-1:exon
so has part: feature:389099-389245:-1:exon
so has part: feature:388806-388943:-1:exon
so has part: feature:388139-388198:-1:exon
so has part: feature:387869-388045:-1:exon
so has part: feature:387133-387219:-1:exon
so has part: feature:386567-386713:-1:exon
so has part: feature:386346-386411:-1:exon
so has part: feature:385634-385859:-1:exon
so has part: feature:385036-385185:-1:exon
so has part: feature:384463-384567:-1:exon
so has part: feature:384193-384300:-1:exon
so has part: feature:383892-384085:-1:exon
so has part: feature:383245-383389:-1:exon
so has part: feature:383025-383158:-1:exon
so has part: feature:382523-382737:-1:exon
so has part: feature:380366-380369:-1:exon

XP_010716580.1
type: Protein
SIO_000068: ncbiprotein

position:432111:-1
position: 432111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:432031-432111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:426598-426734:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:424645-424760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:424019-424104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:422945-423014:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:422152-422247:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:421736-421852:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:421049-421245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:420619-420752:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:419424-419551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:418392-418483:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:417126-417248:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:415060-415206:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:413199-413261:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:412317-412430:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:411881-411934:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:410742-410822:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:410286-410444:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:409462-409524:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:407943-408044:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:406821-406907:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:406450-406561:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:405749-405932:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:405423-405516:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:404405-404563:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:403464-403559:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:402989-403084:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:402331-402378:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:401765-401895:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:401284-401395:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:400983-401060:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:400515-400616:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:399936-400043:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:399292-399423:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:399012-399140:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:398497-398553:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:397610-397696:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:396421-396616:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:395922-396017:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:395109-395154:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:393770-393849:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:392911-393036:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:392170-392243:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:391733-391807:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:391264-391383:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:390272-390319:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:390076-390159:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:389099-389245:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:388806-388943:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:388139-388198:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:387869-388045:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:387133-387219:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:386567-386713:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:386346-386411:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:385634-385859:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:385036-385185:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:384463-384567:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:384193-384300:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:383892-384085:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:383245-383389:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:383025-383158:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:382523-382737:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:380366-380369:-1:exon

NISCH
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NISCH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(440050..471878)
location: region:440050-471878:-1
so has part: feature:440050-471878:-1:exon
subclass of: SO_0000010

100540291
type: Gene
SIO_000068: ncbigene

position:440050:-1
position: 440050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471878:-1
position: 471878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440050-471878:-1:exon

NISCH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NISCH
product: nischarin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010718279.3
SIO_010081: NISCH
subclass of: SO_0000673
so part of: NISCH
location: complement(join(440050..441436,442617..442778,443524..443652,444228..444381,445524..445698,446105..447403,447885..447928,448728..448849,452717..452825,453635..453748,454770..454898,455097..455282,455653..455721,456524..456676,457217..457312,457975..458070,459327..459490,460886..460934,465589..465771,466053..466136,470960..471037,471807..471878))
location: region:440050-471878:-1
so has part: feature:471807-471878:-1:exon
so has part: feature:470960-471037:-1:exon
so has part: feature:466053-466136:-1:exon
so has part: feature:465589-465771:-1:exon
so has part: feature:460886-460934:-1:exon
so has part: feature:459327-459490:-1:exon
so has part: feature:457975-458070:-1:exon
so has part: feature:457217-457312:-1:exon
so has part: feature:456524-456676:-1:exon
so has part: feature:455653-455721:-1:exon
so has part: feature:455097-455282:-1:exon
so has part: feature:454770-454898:-1:exon
so has part: feature:453635-453748:-1:exon
so has part: feature:452717-452825:-1:exon
so has part: feature:448728-448849:-1:exon
so has part: feature:447885-447928:-1:exon
so has part: feature:446105-447403:-1:exon
so has part: feature:445524-445698:-1:exon
so has part: feature:444228-444381:-1:exon
so has part: feature:443524-443652:-1:exon
so has part: feature:442617-442778:-1:exon
so has part: feature:440050-441436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:471807-471878:-1:exon

position:471807:-1
position: 471807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:470960-471037:-1:exon

position:470960:-1
position: 470960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471037:-1
position: 471037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:466053-466136:-1:exon

position:466053:-1
position: 466053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:466136:-1
position: 466136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:465589-465771:-1:exon

position:465589:-1
position: 465589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465771:-1
position: 465771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:460886-460934:-1:exon

position:460886:-1
position: 460886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460934:-1
position: 460934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459327-459490:-1:exon

position:459327:-1
position: 459327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:459490:-1
position: 459490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:457975-458070:-1:exon

position:457975:-1
position: 457975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:458070:-1
position: 458070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:457217-457312:-1:exon

position:457217:-1
position: 457217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457312:-1
position: 457312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:456524-456676:-1:exon

position:456524:-1
position: 456524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:456676:-1
position: 456676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:455653-455721:-1:exon

position:455653:-1
position: 455653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455721:-1
position: 455721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:455097-455282:-1:exon

position:455097:-1
position: 455097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455282:-1
position: 455282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:454770-454898:-1:exon

position:454770:-1
position: 454770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454898:-1
position: 454898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:453635-453748:-1:exon

position:453635:-1
position: 453635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453748:-1
position: 453748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:452717-452825:-1:exon

position:452717:-1
position: 452717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452825:-1
position: 452825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:448728-448849:-1:exon

position:448728:-1
position: 448728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:448849:-1
position: 448849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:447885-447928:-1:exon

position:447885:-1
position: 447885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447928:-1
position: 447928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:446105-447403:-1:exon

position:446105:-1
position: 446105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:447403:-1
position: 447403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:445524-445698:-1:exon

position:445524:-1
position: 445524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:445698:-1
position: 445698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:444228-444381:-1:exon

position:444228:-1
position: 444228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:444381:-1
position: 444381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:443524-443652:-1:exon

position:443524:-1
position: 443524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443652:-1
position: 443652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:442617-442778:-1:exon

position:442617:-1
position: 442617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:442778:-1
position: 442778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:440050-441436:-1:exon

position:441436:-1
position: 441436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NISCH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NISCH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nischarin
translation: MDAAVGFFSSKNKSHLSSTEITLQAAAGEDGEEPLRSARVLGSELVETYTVYIIQVSVGSHQWTVKHRYSDFHDLHEKLVSEKKIDKNLLPPKKIIGKNSKSLVEKRQKELEVYLQTLLVKFPVTVPKVLSHFLHFHFYEINGITAALAEDLFHKGEQLLMAGEVFTIRPLQLYAVTQQLLQGKPTCANGDAKTDLGHILDFTCRLKYLKVTGTGGPFGTSNIQEHLLPFDLSIFKSLHQIEINHCGGKLIRGLTSSKHTLATMSVRFSATSMKEILVPEASEFDQWEPEGASASCPVTAVIPTWRNLTTLDMSHNNISQIDDSVKLIPKIEFLDLSHNGVSLVENLQHLYNLVHLDLSYNKLASLEGVHTKLGNIKTLNLAGNQLESLYGLNKLYSLVNLDLSSNKIEQIDEVKNIGSLPCLEKVVLSSNPLSIIPDYRTKVLAQFGDRASEVCLDNVVTTEKELDTVEVLKAIQKSKEVKYKLSNSDKKISEDFRLTAASSKSNCSSLTVRPSSPSLPRPVSSSQEIVCEETVLASSSLQFDASTPTDHTVPQRCSEIPDSRCKNQAPVSLLEYGRGSNMCLDHSEEERCTVPDPCNTVILPFNCMSYTATNQDFTQHLSALIAQTVQRTPPSFIENKGSLPASSRTTDKEDGYFEMGLHEGDQTFEFSASQTQSADNTAVKSINVVKILWSFSIHIYKEVRQFASCLALTDDLLAVFEIPPQELRGSCQHIPSALKLILCFPYADLTEFGFLMPEICLTLKLKNSDNCLFVVSDSQNLQDFYSCLHTCHSQHCTSVLPISTTYCGSANLQEFLGQLMELNCISSEDVEIKGCFPTYLVYGNKTLHQPESAGSNKTWSKNDLCSTLYSSVHKSSDQCPCVFHPCWLFLTPQHLYIIKVDFSVLPSKLIATGDLRSVLKLNSIPLASVVLHPSHGSIQQKGSFLDGHVLELLIGYRFVTAVFVLPHEKFHFLKVYSLLRTLLKNVKTIIIFKASNKSDAAINHALESNRHGQSASFYKPHLTLSSLYPSEFLIQKITEENQIPVHLHASVSLQYVAGLKGNALVEFFHGNIAEVENEELRHLMWSSVLFYKTPSVEVMACVLLSTKAIYFLLDDTFNHADEHQSDFWNQENSECENNSFHLSCCLVLKLNDLQSVNVGLFDQYFRITGQSADHIVTCLTRDSYNTHAFIQQLMAVLSLLARTPSPEPIDKDFYSEFGSKNTGKMENYELIHSSRVKFIYPNEEEIGDLAFLVAEKMDDLTHLQSLHILLYVLAFQVNPVEGSAQNTSPLQPKTLILTSSDLFLFDEDYICYPLPEFAKEPPKRDKYRLADGRRIRDLDRVLMGYQTYPQALTFVFDDVQNQNLMQNLALDHFGDADSAPKGNAKQEDIRTREIQWYVFIPSAESRERLISLLARQWEILCGRELPLELTG
SIO_010081: NISCH
subclass of: SO_0000673
so part of: NISCH
location: complement(join(440808..441436,442617..442778,443524..443652,444228..444381,445524..445698,446105..447403,447885..447928,448728..448849,452717..452825,453635..453748,454770..454898,455097..455282,455653..455721,456524..456676,457217..457312,457975..458070,459327..459490,460886..460934,465589..465771,466053..466136,470960..471037,471807..471878))
location: region:440808-471878:-1
so has part: feature:471807-471878:-1:exon
so has part: feature:470960-471037:-1:exon
so has part: feature:466053-466136:-1:exon
so has part: feature:465589-465771:-1:exon
so has part: feature:460886-460934:-1:exon
so has part: feature:459327-459490:-1:exon
so has part: feature:457975-458070:-1:exon
so has part: feature:457217-457312:-1:exon
so has part: feature:456524-456676:-1:exon
so has part: feature:455653-455721:-1:exon
so has part: feature:455097-455282:-1:exon
so has part: feature:454770-454898:-1:exon
so has part: feature:453635-453748:-1:exon
so has part: feature:452717-452825:-1:exon
so has part: feature:448728-448849:-1:exon
so has part: feature:447885-447928:-1:exon
so has part: feature:446105-447403:-1:exon
so has part: feature:445524-445698:-1:exon
so has part: feature:444228-444381:-1:exon
so has part: feature:443524-443652:-1:exon
so has part: feature:442617-442778:-1:exon
so has part: feature:440808-441436:-1:exon

XP_010716581.1
type: Protein
SIO_000068: ncbiprotein

position:440808:-1
position: 440808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471807-471878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470960-471037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:466053-466136:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:465589-465771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:460886-460934:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459327-459490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:457975-458070:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:457217-457312:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:456524-456676:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:455653-455721:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:455097-455282:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454770-454898:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:453635-453748:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:452717-452825:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:448728-448849:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:447885-447928:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:446105-447403:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:445524-445698:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:444228-444381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:443524-443652:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:442617-442778:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:440808-441436:-1:exon

TNNC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TNNC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 472273..478143
location: region:472273-478143:1
so has part: feature:472273-478143:1:exon
subclass of: SO_0000010

100546476
type: Gene
SIO_000068: ncbigene

position:472273:1
position: 472273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478143:1
position: 478143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472273-478143:1:exon

TNNC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TNNC1
product: troponin C1, slow skeletal and cardiac type
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 133 samples with support for all annotated introns
transcript id: XM_010718270.2
SIO_010081: TNNC1
subclass of: SO_0000673
so part of: TNNC1
location: join(472273..472363,475904..475934,476113..476259,477067..477181,477257..477393,477963..478143)
location: region:472273-478143:1
so has part: feature:472273-472363:1:exon
so has part: feature:475904-475934:1:exon
so has part: feature:476113-476259:1:exon
so has part: feature:477067-477181:1:exon
so has part: feature:477257-477393:1:exon
so has part: feature:477963-478143:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:472273-472363:1:exon

position:472363:1
position: 472363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:475904-475934:1:exon

position:475904:1
position: 475904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475934:1
position: 475934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:476113-476259:1:exon

position:476113:1
position: 476113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476259:1
position: 476259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:477067-477181:1:exon

position:477067:1
position: 477067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477181:1
position: 477181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:477257-477393:1:exon

position:477257:1
position: 477257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477393:1
position: 477393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:477963-478143:1:exon

position:477963:1
position: 477963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNNC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TNNC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: troponin C, slow skeletal and cardiac muscles
translation: MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGVE
SIO_010081: TNNC1
subclass of: SO_0000673
so part of: TNNC1
location: join(472340..472363,475904..475934,476113..476259,477067..477181,477257..477393,477963..477994)
location: region:472340-477994:1
so has part: feature:472340-472363:1:exon
so has part: feature:475904-475934:1:exon
so has part: feature:476113-476259:1:exon
so has part: feature:477067-477181:1:exon
so has part: feature:477257-477393:1:exon
so has part: feature:477963-477994:1:exon

XP_010716572.1
type: Protein
SIO_000068: ncbiprotein

position:472340:1
position: 472340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477994:1
position: 477994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472340-472363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:475904-475934:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476113-476259:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477067-477181:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477257-477393:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477963-477994:1:exon

RPL29
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RPL29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(484399..486667)
location: region:484399-486667:-1
so has part: feature:484399-486667:-1:exon
subclass of: SO_0000010

100540447
type: Gene
SIO_000068: ncbigene

position:484399:-1
position: 484399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486667:-1
position: 486667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484399-486667:-1:exon

RPL29
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RPL29
product: ribosomal protein L29
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003209959.4
SIO_010081: RPL29
subclass of: SO_0000673
so part of: RPL29
location: complement(join(484399..484596,485681..485745,486408..486452,486585..486667))
location: region:484399-486667:-1
so has part: feature:486585-486667:-1:exon
so has part: feature:486408-486452:-1:exon
so has part: feature:485681-485745:-1:exon
so has part: feature:484399-484596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:486585-486667:-1:exon

position:486585:-1
position: 486585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:486408-486452:-1:exon

position:486408:-1
position: 486408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486452:-1
position: 486452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:485681-485745:-1:exon

position:485681:-1
position: 485681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485745:-1
position: 485745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:484399-484596:-1:exon

position:484596:-1
position: 484596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPL29
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RPL29
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L29
translation: MAKSKNHTTHNQSRKWHRNGIKKPRSHRYESLKGVDPKFLRNMRFAKKHNKKGLKKMQANNAKQAALQKKD
SIO_010081: RPL29
subclass of: SO_0000673
so part of: RPL29
location: complement(join(484483..484596,485681..485745,486408..486444))
location: region:484483-486444:-1
so has part: feature:486408-486444:-1:exon
so has part: feature:485681-485745:-1:exon
so has part: feature:484483-484596:-1:exon

XP_003210007.1
type: Protein
SIO_000068: ncbiprotein

position:484483:-1
position: 484483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:486444:-1
position: 486444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:486408-486444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:485681-485745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:484483-484596:-1:exon

LOC116217161
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217161
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(584023..586510)
location: region:584023-586510:-1
so has part: feature:584023-586510:-1:exon
subclass of: SO_0000011

116217161
type: Gene
SIO_000068: ncbigene

position:584023:-1
position: 584023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586510:-1
position: 586510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:584023-586510:-1:exon

LOC116217161
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217161
product: uncharacterized LOC116217161
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XR_004161275.1
SIO_010081: LOC116217161
subclass of: SO_0000673
so part of: LOC116217161
location: complement(join(584023..585944,586421..586510))
location: region:584023-586510:-1
so has part: feature:586421-586510:-1:exon
so has part: feature:584023-585944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586421-586510:-1:exon

position:586421:-1
position: 586421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:584023-585944:-1:exon

position:585944:-1
position: 585944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913093
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913093
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 634383..644016
location: region:634383-644016:1
so has part: feature:634383-644016:1:exon
subclass of: SO_0000011

104913093
type: Gene
SIO_000068: ncbigene

position:634383:1
position: 634383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644016:1
position: 644016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634383-644016:1:exon

LOC104913093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913093
product: uncharacterized LOC104913093, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004161276.1
SIO_010081: LOC104913093
subclass of: SO_0000673
so part of: LOC104913093
location: join(634383..635773,638724..638797,642342..644016)
location: region:634383-644016:1
so has part: feature:634383-635773:1:exon
so has part: feature:638724-638797:1:exon
so has part: feature:642342-644016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634383-635773:1:exon

position:635773:1
position: 635773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:638724-638797:1:exon

position:638724:1
position: 638724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638797:1
position: 638797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:642342-644016:1:exon

position:642342:1
position: 642342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913093
product: uncharacterized LOC104913093, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004161277.1
SIO_010081: LOC104913093
subclass of: SO_0000673
so part of: LOC104913093
location: join(634383..635773,638740..638797,642342..644016)
location: region:634383-644016:1
so has part: feature:634383-635773:1:exon
so has part: feature:638740-638797:1:exon
so has part: feature:642342-644016:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634383-635773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638740-638797:1:exon

position:638740:1
position: 638740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:642342-644016:1:exon

LOC104913093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913093
product: uncharacterized LOC104913093, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_795123.2
SIO_010081: LOC104913093
subclass of: SO_0000673
so part of: LOC104913093
location: join(634383..635773,638724..638797,640885..641905)
location: region:634383-641905:1
so has part: feature:634383-635773:1:exon
so has part: feature:638724-638797:1:exon
so has part: feature:640885-641905:1:exon

position:641905:1
position: 641905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634383-635773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638724-638797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640885-641905:1:exon

position:640885:1
position: 640885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913093
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913093
product: uncharacterized LOC104913093, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_795124.2
SIO_010081: LOC104913093
subclass of: SO_0000673
so part of: LOC104913093
location: join(634383..635773,638740..638797,640885..641905)
location: region:634383-641905:1
so has part: feature:634383-635773:1:exon
so has part: feature:638740-638797:1:exon
so has part: feature:640885-641905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634383-635773:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:638740-638797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640885-641905:1:exon

LOC104913094
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(681498..687658)
location: region:681498-687658:-1
so has part: feature:681498-687658:-1:exon
subclass of: SO_0000011

104913094
type: Gene
SIO_000068: ncbigene

position:681498:-1
position: 681498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687658:-1
position: 687658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681498-687658:-1:exon

LOC104913094
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913094
product: uncharacterized LOC104913094, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002119528.1
SIO_010081: LOC104913094
subclass of: SO_0000673
so part of: LOC104913094
location: complement(join(681498..683583,683700..683837,685057..685194,686829..686936,687491..687658))
location: region:681498-687658:-1
so has part: feature:687491-687658:-1:exon
so has part: feature:686829-686936:-1:exon
so has part: feature:685057-685194:-1:exon
so has part: feature:683700-683837:-1:exon
so has part: feature:681498-683583:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:687491-687658:-1:exon

position:687491:-1
position: 687491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:686829-686936:-1:exon

position:686829:-1
position: 686829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686936:-1
position: 686936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:685057-685194:-1:exon

position:685057:-1
position: 685057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685194:-1
position: 685194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:683700-683837:-1:exon

position:683700:-1
position: 683700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683837:-1
position: 683837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:681498-683583:-1:exon

position:683583:-1
position: 683583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913094
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913094
product: uncharacterized LOC104913094, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_795127.3
SIO_010081: LOC104913094
subclass of: SO_0000673
so part of: LOC104913094
location: complement(join(681498..683583,683700..683820,685057..685194,686829..686936,687491..687657))
location: region:681498-687657:-1
so has part: feature:687491-687657:-1:exon
so has part: feature:686829-686936:-1:exon
so has part: feature:685057-685194:-1:exon
so has part: feature:683700-683820:-1:exon
so has part: feature:681498-683583:-1:exon

position:687657:-1
position: 687657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:687491-687657:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:686829-686936:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:685057-685194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:683700-683820:-1:exon

position:683820:-1
position: 683820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:681498-683583:-1:exon

LOC109369895
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(723555..729498)
location: region:723555-729498:-1
so has part: feature:723555-729498:-1:exon
subclass of: SO_0000011

109369895
type: Gene
SIO_000068: ncbigene

position:723555:-1
position: 723555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729498:-1
position: 729498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:723555-729498:-1:exon

LOC109369895
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369895
product: uncharacterized LOC109369895
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002119535.1
SIO_010081: LOC109369895
subclass of: SO_0000673
so part of: LOC109369895
location: complement(join(723555..725168,728183..728339,729331..729498))
location: region:723555-729498:-1
so has part: feature:729331-729498:-1:exon
so has part: feature:728183-728339:-1:exon
so has part: feature:723555-725168:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:729331-729498:-1:exon

position:729331:-1
position: 729331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:728183-728339:-1:exon

position:728183:-1
position: 728183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728339:-1
position: 728339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:723555-725168:-1:exon

position:725168:-1
position: 725168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913095
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(736345..743171)
location: region:736345-743171:-1
so has part: feature:736345-743171:-1:exon
subclass of: SO_0000011

104913095
type: Gene
SIO_000068: ncbigene

position:736345:-1
position: 736345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743171:-1
position: 743171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736345-743171:-1:exon

LOC104913095
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913095
product: uncharacterized LOC104913095
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004161278.1
SIO_010081: LOC104913095
subclass of: SO_0000673
so part of: LOC104913095
location: complement(join(736345..737603,738540..738603,739252..739352,742476..743171))
location: region:736345-743171:-1
so has part: feature:742476-743171:-1:exon
so has part: feature:739252-739352:-1:exon
so has part: feature:738540-738603:-1:exon
so has part: feature:736345-737603:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:742476-743171:-1:exon

position:742476:-1
position: 742476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:739252-739352:-1:exon

position:739252:-1
position: 739252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739352:-1
position: 739352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:738540-738603:-1:exon

position:738540:-1
position: 738540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738603:-1
position: 738603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:736345-737603:-1:exon

position:737603:-1
position: 737603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DUSP7
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DUSP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(797536..801636)
location: region:797536-801636:-1
so has part: feature:797536-801636:-1:exon
subclass of: SO_0000010

100540603
type: Gene
SIO_000068: ncbigene

position:797536:-1
position: 797536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801636:-1
position: 801636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797536-801636:-1:exon

DUSP7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DUSP7
product: dual specificity phosphatase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 25 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010718280.2
SIO_010081: DUSP7
subclass of: SO_0000673
so part of: DUSP7
location: complement(join(797536..798375,800632..801060,801606..801636))
location: region:797536-801636:-1
so has part: feature:801606-801636:-1:exon
so has part: feature:800632-801060:-1:exon
so has part: feature:797536-798375:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:801606-801636:-1:exon

position:801606:-1
position: 801606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:800632-801060:-1:exon

position:800632:-1
position: 800632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:801060:-1
position: 801060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:797536-798375:-1:exon

position:798375:-1
position: 798375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DUSP7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DUSP7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity protein phosphatase 7
translation: MEEGLGTGVKGGFNKFQTEYSEHCETNLDSSSPNNSPPVSVLGLGGLRISSDCSDGESDREPSSATESDGSPIPSNQPAFPVQILPYLYLGCAKDSTNLDILGKYGIKYILNVTPNLPNMFEHDGEFKYKQIPISDHWSQNLSQFFPEAIAFIDEARSKKCGILVHCLAGISRSVTVTVAYLMQKLNLSLNDAYDFVKRKKSNISPNFNFMGQLLDFERTLGLNSPCDNRSPSEQLYFTTPTNHNLFQLNTLEST
SIO_010081: DUSP7
subclass of: SO_0000673
so part of: DUSP7
location: complement(join(798068..798375,800632..801060,801606..801636))
location: region:798068-801636:-1
so has part: feature:801606-801636:-1:exon
so has part: feature:800632-801060:-1:exon
so has part: feature:798068-798375:-1:exon

XP_010716582.1
type: Protein
SIO_000068: ncbiprotein

position:798068:-1
position: 798068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801606-801636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:800632-801060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798068-798375:-1:exon

LOC109369898
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369898
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 802625..803764
location: region:802625-803764:1
so has part: feature:802625-803764:1:exon
subclass of: SO_0000011

109369898
type: Gene
SIO_000068: ncbigene

position:802625:1
position: 802625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803764:1
position: 803764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802625-803764:1:exon

LOC109369898
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369898
product: uncharacterized LOC109369898
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XR_002119540.2
SIO_010081: LOC109369898
subclass of: SO_0000673
so part of: LOC109369898
location: join(802625..803259,803356..803764)
location: region:802625-803764:1
so has part: feature:802625-803259:1:exon
so has part: feature:803356-803764:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:802625-803259:1:exon

position:803259:1
position: 803259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:803356-803764:1:exon

position:803356:1
position: 803356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POC1A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: POC1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(847159..900927)
location: region:847159-900927:-1
so has part: feature:847159-900927:-1:exon
subclass of: SO_0000010

100540759
type: Gene
SIO_000068: ncbigene

position:847159:-1
position: 847159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900927:-1
position: 900927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:847159-900927:-1:exon

POC1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: POC1A
product: POC1 centriolar protein A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_019619997.2
SIO_010081: POC1A
subclass of: SO_0000673
so part of: POC1A
location: complement(join(847159..847438,858036..858176,867408..867506,870187..870255,880991..881124,885560..885675,886714..886821,888029..888208,894737..894908,898625..898709,900854..900927))
location: region:847159-900927:-1
so has part: feature:900854-900927:-1:exon
so has part: feature:898625-898709:-1:exon
so has part: feature:894737-894908:-1:exon
so has part: feature:888029-888208:-1:exon
so has part: feature:886714-886821:-1:exon
so has part: feature:885560-885675:-1:exon
so has part: feature:880991-881124:-1:exon
so has part: feature:870187-870255:-1:exon
so has part: feature:867408-867506:-1:exon
so has part: feature:858036-858176:-1:exon
so has part: feature:847159-847438:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:900854-900927:-1:exon

position:900854:-1
position: 900854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:898625-898709:-1:exon

position:898625:-1
position: 898625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898709:-1
position: 898709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:894737-894908:-1:exon

position:894737:-1
position: 894737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894908:-1
position: 894908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:888029-888208:-1:exon

position:888029:-1
position: 888029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888208:-1
position: 888208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:886714-886821:-1:exon

position:886714:-1
position: 886714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886821:-1
position: 886821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:885560-885675:-1:exon

position:885560:-1
position: 885560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885675:-1
position: 885675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:880991-881124:-1:exon

position:880991:-1
position: 880991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:881124:-1
position: 881124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:870187-870255:-1:exon

position:870187:-1
position: 870187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870255:-1
position: 870255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:867408-867506:-1:exon

position:867408:-1
position: 867408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:867506:-1
position: 867506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:858036-858176:-1:exon

position:858036:-1
position: 858036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858176:-1
position: 858176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:847159-847438:-1:exon

position:847438:-1
position: 847438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POC1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: POC1A
product: POC1 centriolar protein A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_019619998.2
SIO_010081: POC1A
subclass of: SO_0000673
so part of: POC1A
location: complement(join(847159..847438,867408..867506,870187..870255,880991..881124,885560..885675,886714..886821,888029..888208,894737..894908,898625..898709,899527..899630))
location: region:847159-899630:-1
so has part: feature:899527-899630:-1:exon
so has part: feature:898625-898709:-1:exon
so has part: feature:894737-894908:-1:exon
so has part: feature:888029-888208:-1:exon
so has part: feature:886714-886821:-1:exon
so has part: feature:885560-885675:-1:exon
so has part: feature:880991-881124:-1:exon
so has part: feature:870187-870255:-1:exon
so has part: feature:867408-867506:-1:exon
so has part: feature:847159-847438:-1:exon

position:899630:-1
position: 899630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899527-899630:-1:exon

position:899527:-1
position: 899527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:898625-898709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:894737-894908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888029-888208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886714-886821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885560-885675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:880991-881124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:870187-870255:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:867408-867506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:847159-847438:-1:exon

POC1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: POC1A
product: POC1 centriolar protein A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 196 samples with support for all annotated introns
transcript id: XM_003209961.4
SIO_010081: POC1A
subclass of: SO_0000673
so part of: POC1A
location: complement(join(847159..847438,858036..858176,867408..867506,870187..870255,880991..881124,885560..885675,886714..886821,888029..888208,894737..894908,898625..898709,899527..899629))
location: region:847159-899629:-1
so has part: feature:899527-899629:-1:exon
so has part: feature:898625-898709:-1:exon
so has part: feature:894737-894908:-1:exon
so has part: feature:888029-888208:-1:exon
so has part: feature:886714-886821:-1:exon
so has part: feature:885560-885675:-1:exon
so has part: feature:880991-881124:-1:exon
so has part: feature:870187-870255:-1:exon
so has part: feature:867408-867506:-1:exon
so has part: feature:858036-858176:-1:exon
so has part: feature:847159-847438:-1:exon

position:899629:-1
position: 899629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899527-899629:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898625-898709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:894737-894908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888029-888208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886714-886821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885560-885675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:880991-881124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:870187-870255:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:867408-867506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:858036-858176:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847159-847438:-1:exon

POC1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: POC1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POC1 centriolar protein homolog A isoform X3
translation: MAAGGADDPSLERHFKGHRDAITSVDFSLNKKQLASGSMDSSLMIWSMKPQMRAYHLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHASGTCIAAAGTDNTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKTNFNAADYGEVLKSHKSGADVDETHHILTVSILEQRLTLTENKLKEFLENQQKIIQNKEN
SIO_010081: POC1A
subclass of: SO_0000673
so part of: POC1A
location: complement(join(847340..847438,867408..867506,870187..870255,880991..881124,885560..885675,886714..886821,888029..888208,894737..894908,898625..898709,899527..899544))
location: region:847340-899544:-1
so has part: feature:899527-899544:-1:exon
so has part: feature:898625-898709:-1:exon
so has part: feature:894737-894908:-1:exon
so has part: feature:888029-888208:-1:exon
so has part: feature:886714-886821:-1:exon
so has part: feature:885560-885675:-1:exon
so has part: feature:880991-881124:-1:exon
so has part: feature:870187-870255:-1:exon
so has part: feature:867408-867506:-1:exon
so has part: feature:847340-847438:-1:exon

XP_019475543.1
type: Protein
SIO_000068: ncbiprotein

position:847340:-1
position: 847340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899544:-1
position: 899544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899527-899544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898625-898709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:894737-894908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888029-888208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886714-886821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885560-885675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:880991-881124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:870187-870255:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:867408-867506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:847340-847438:-1:exon

POC1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: POC1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POC1 centriolar protein homolog A isoform X1
translation: MAAGGADDPSLERHFKGHRDAITSVDFSLNKKQLASGSMDSSLMIWSMKPQMRAYHLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHASGTCIAAAGTDNTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKTNFNAADYGEVLKSHKSGADVDETHHILPSEMDCGVHLKKTKSQDAGRNHERQEEDVHIADTLEHIIGQLDVLTQTVSILEQRLTLTENKLKEFLENQQKIIQNKEN
SIO_010081: POC1A
subclass of: SO_0000673
so part of: POC1A
location: complement(join(847340..847438,858036..858176,867408..867506,870187..870255,880991..881124,885560..885675,886714..886821,888029..888208,894737..894908,898625..898709,899527..899544))
location: region:847340-899544:-1
so has part: feature:899527-899544:-1:exon
so has part: feature:898625-898709:-1:exon
so has part: feature:894737-894908:-1:exon
so has part: feature:888029-888208:-1:exon
so has part: feature:886714-886821:-1:exon
so has part: feature:885560-885675:-1:exon
so has part: feature:880991-881124:-1:exon
so has part: feature:870187-870255:-1:exon
so has part: feature:867408-867506:-1:exon
so has part: feature:858036-858176:-1:exon
so has part: feature:847340-847438:-1:exon

XP_003210009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:899527-899544:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:898625-898709:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:894737-894908:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:888029-888208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:886714-886821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:885560-885675:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:880991-881124:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:870187-870255:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:867408-867506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:858036-858176:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:847340-847438:-1:exon

POC1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: POC1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: POC1 centriolar protein homolog A isoform X2
translation: MDSSLMIWSMKPQMRAYHLVGHKDAVMCVQFSPSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHASGTCIAAAGTDNTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMVWKTNFNAADYGEVLKSHKSGADVDETHHILPSEMDCGVHLKKTKSQDAGRNHERQEEDVHIADTLEHIIGQLDVLTQTVSILEQRLTLTENKLKEFLENQQKIIQNKEN
SIO_010081: POC1A
subclass of: SO_0000673
so part of: POC1A
location: complement(join(847340..847438,858036..858176,867408..867506,870187..870255,880991..881124,885560..885675,886714..886821,888029..888208,894737..894897))
location: region:847340-894897:-1
so has part: feature:894737-894897:-1:exon
so has part: feature:888029-888208:-1:exon
so has part: feature:886714-886821:-1:exon
so has part: feature:885560-885675:-1:exon
so has part: feature:880991-881124:-1:exon
so has part: feature:870187-870255:-1:exon
so has part: feature:867408-867506:-1:exon
so has part: feature:858036-858176:-1:exon
so has part: feature:847340-847438:-1:exon

XP_019475542.1
type: Protein
SIO_000068: ncbiprotein

position:894897:-1
position: 894897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:894737-894897:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:888029-888208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:886714-886821:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:885560-885675:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:880991-881124:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:870187-870255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:867408-867506:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:858036-858176:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:847340-847438:-1:exon

RRP9
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RRP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(900951..907901)
location: region:900951-907901:-1
so has part: feature:900951-907901:-1:exon
subclass of: SO_0000010

100540911
type: Gene
SIO_000068: ncbigene

position:900951:-1
position: 900951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907901:-1
position: 907901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:900951-907901:-1:exon

RRP9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RRP9
product: ribosomal RNA processing 9, U3 small nucleolar RNA binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003209962.4
SIO_010081: RRP9
subclass of: SO_0000673
so part of: RRP9
location: complement(join(900951..901119,901217..901290,901406..901485,901583..901731,901807..901869,902043..902177,902287..902387,902571..902663,902972..903096,903689..903815,907884..907901))
location: region:900951-907901:-1
so has part: feature:907884-907901:-1:exon
so has part: feature:903689-903815:-1:exon
so has part: feature:902972-903096:-1:exon
so has part: feature:902571-902663:-1:exon
so has part: feature:902287-902387:-1:exon
so has part: feature:902043-902177:-1:exon
so has part: feature:901807-901869:-1:exon
so has part: feature:901583-901731:-1:exon
so has part: feature:901406-901485:-1:exon
so has part: feature:901217-901290:-1:exon
so has part: feature:900951-901119:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907884-907901:-1:exon

position:907884:-1
position: 907884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:903689-903815:-1:exon

position:903689:-1
position: 903689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903815:-1
position: 903815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:902972-903096:-1:exon

position:902972:-1
position: 902972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903096:-1
position: 903096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:902571-902663:-1:exon

position:902571:-1
position: 902571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902663:-1
position: 902663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:902287-902387:-1:exon

position:902287:-1
position: 902287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902387:-1
position: 902387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:902043-902177:-1:exon

position:902043:-1
position: 902043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902177:-1
position: 902177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:901807-901869:-1:exon

position:901807:-1
position: 901807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901869:-1
position: 901869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:901583-901731:-1:exon

position:901583:-1
position: 901583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901731:-1
position: 901731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:901406-901485:-1:exon

position:901406:-1
position: 901406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901485:-1
position: 901485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:901217-901290:-1:exon

position:901217:-1
position: 901217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901290:-1
position: 901290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:900951-901119:-1:exon

position:901119:-1
position: 901119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RRP9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RRP9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar RNA-interacting protein 2
translation: MPPSFWVCPPAAAAIRVLRGHQHSVTCLVVSPDDKFIFSAAKDGSVIKWEVESGKRLCVVPGGKKGTEGQHMGHTAHVLCIAISSDGKYLATGDRNKLILIWEAATCKRLYTFTGHRDAVSGLSFRKGTYQLYSASHDRSVKVWNVEENAYLETLFGHQDIITGMDSLSRECCVTSGGRDGTVRFWKIPEESQLIFYGHQGSIDCIQLINEEHMVSGADDGSVALWGLAKKKPLALVRQSHGTQGSAQDLQQPYWVSAVAALLNSDLVATGSHSGCVKLWKCGEGFQKLEPLCDIPLIGFVNSLKFSSTGDFLVAGIGQEHRLGRWWRVKEAKNSICIIPLKCRAEAPGPMAADCA
SIO_010081: RRP9
subclass of: SO_0000673
so part of: RRP9
location: complement(join(901014..901119,901217..901290,901406..901485,901583..901731,901807..901869,902043..902177,902287..902387,902571..902663,902972..903096,903689..903815,907884..907901))
location: region:901014-907901:-1
so has part: feature:907884-907901:-1:exon
so has part: feature:903689-903815:-1:exon
so has part: feature:902972-903096:-1:exon
so has part: feature:902571-902663:-1:exon
so has part: feature:902287-902387:-1:exon
so has part: feature:902043-902177:-1:exon
so has part: feature:901807-901869:-1:exon
so has part: feature:901583-901731:-1:exon
so has part: feature:901406-901485:-1:exon
so has part: feature:901217-901290:-1:exon
so has part: feature:901014-901119:-1:exon

XP_003210010.2
type: Protein
SIO_000068: ncbiprotein

position:901014:-1
position: 901014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907884-907901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903689-903815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902972-903096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902571-902663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902287-902387:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902043-902177:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901807-901869:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:901583-901731:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:901406-901485:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:901217-901290:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:901014-901119:-1:exon

LOC104913097
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 907087..917541
location: region:907087-917541:1
so has part: feature:907087-917541:1:exon
subclass of: SO_0000010

104913097
type: Gene
SIO_000068: ncbigene

position:907087:1
position: 907087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:917541:1
position: 917541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907087-917541:1:exon

LOC104913097
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913097
product: PHD finger protein 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555493.1
SIO_010081: LOC104913097
subclass of: SO_0000673
so part of: LOC104913097
location: join(907087..911321,912021..912112,912204..912302,912561..912685,912867..913029,913121..913227,913419..913529,915506..915624,915789..916385,917537..917541)
location: region:907087-917541:1
so has part: feature:907087-911321:1:exon
so has part: feature:912021-912112:1:exon
so has part: feature:912204-912302:1:exon
so has part: feature:912561-912685:1:exon
so has part: feature:912867-913029:1:exon
so has part: feature:913121-913227:1:exon
so has part: feature:913419-913529:1:exon
so has part: feature:915506-915624:1:exon
so has part: feature:915789-916385:1:exon
so has part: feature:917537-917541:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907087-911321:1:exon

position:911321:1
position: 911321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:912021-912112:1:exon

position:912021:1
position: 912021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912112:1
position: 912112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:912204-912302:1:exon

position:912204:1
position: 912204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912302:1
position: 912302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:912561-912685:1:exon

position:912561:1
position: 912561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912685:1
position: 912685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:912867-913029:1:exon

position:912867:1
position: 912867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913029:1
position: 913029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:913121-913227:1:exon

position:913121:1
position: 913121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913227:1
position: 913227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:913419-913529:1:exon

position:913419:1
position: 913419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913529:1
position: 913529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:915506-915624:1:exon

position:915506:1
position: 915506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915624:1
position: 915624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:915789-916385:1:exon

position:915789:1
position: 915789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916385:1
position: 916385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:917537-917541:1:exon

position:917537:1
position: 917537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913097
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913097
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 7-like
translation: MHMMSKGTQEAAGSREPACVLCGRVDEDSSIYGHKHEKNGFYFHTFCVIFSTGLCKPGSDIRNACHFEEDLIRTIRRGEQTFCFVCGNLGATITCAEPDCGRSFHLSCTSEGECITQFFEDFRSFCWVHRPHQAVEAAPAQDTTCIICMEPMGNSRSYCTMVCPACQHAWFHRACIQEQALRAGIYCFQCPHCRDRDRFIRDMLTMGIRIPFRKPTWEDNYDASLGVRHQRCDASDCHYPHGREQAEGEGPWQLLLCSSCAAQGTHRRCSNLSHSAASWECNACAGEGTASSTNSDLPGYSTTSHAPSGPADCSPVPESSGLSRQRRTDRRRIRPRAQRDANTCSQSQGHRGSSHNAARIVESRTPNSASQGTSESSRHSPSNGYNLRRRQGQRARTRSRSPLQRPAPDSPSQPRTRRGSRQAPTPSAESCTHRYTGPGASRSSRVSTAADRGQSRQTGRPDSEPLPLNIGLLRPTASPEDAAGAGPGV
SIO_010081: LOC104913097
subclass of: SO_0000673
so part of: LOC104913097
location: join(911270..911321,912021..912112,912204..912302,912561..912685,912867..913029,913121..913227,913419..913529,915506..915624,915789..916385,917537..917541)
location: region:911270-917541:1
so has part: feature:911270-911321:1:exon
so has part: feature:912021-912112:1:exon
so has part: feature:912204-912302:1:exon
so has part: feature:912561-912685:1:exon
so has part: feature:912867-913029:1:exon
so has part: feature:913121-913227:1:exon
so has part: feature:913419-913529:1:exon
so has part: feature:915506-915624:1:exon
so has part: feature:915789-916385:1:exon
so has part: feature:917537-917541:1:exon

XP_031411353.1
type: Protein
SIO_000068: ncbiprotein

position:911270:1
position: 911270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911270-911321:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912021-912112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:912204-912302:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:912561-912685:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:912867-913029:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:913121-913227:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:913419-913529:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:915506-915624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:915789-916385:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:917537-917541:1:exon

LOC104913096
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(917568..920279)
location: region:917568-920279:-1
so has part: feature:917568-920279:-1:exon
subclass of: SO_0000010

104913096
type: Gene
SIO_000068: ncbigene

position:917568:-1
position: 917568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920279:-1
position: 920279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917568-920279:-1:exon

LOC104913096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913096
product: PHD finger protein 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555494.1
SIO_010081: LOC104913096
subclass of: SO_0000673
so part of: LOC104913096
location: complement(join(917568..917620,917744..917902,918067..918185,918316..918429,918648..918754,918849..919011,919202..919866,920166..920279))
location: region:917568-920279:-1
so has part: feature:920166-920279:-1:exon
so has part: feature:919202-919866:-1:exon
so has part: feature:918849-919011:-1:exon
so has part: feature:918648-918754:-1:exon
so has part: feature:918316-918429:-1:exon
so has part: feature:918067-918185:-1:exon
so has part: feature:917744-917902:-1:exon
so has part: feature:917568-917620:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:920166-920279:-1:exon

position:920166:-1
position: 920166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:919202-919866:-1:exon

position:919202:-1
position: 919202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919866:-1
position: 919866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:918849-919011:-1:exon

position:918849:-1
position: 918849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919011:-1
position: 919011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:918648-918754:-1:exon

position:918648:-1
position: 918648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918754:-1
position: 918754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:918316-918429:-1:exon

position:918316:-1
position: 918316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918429:-1
position: 918429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:918067-918185:-1:exon

position:918067:-1
position: 918067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918185:-1
position: 918185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:917744-917902:-1:exon

position:917744:-1
position: 917744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917902:-1
position: 917902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:917568-917620:-1:exon

position:917620:-1
position: 917620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 7-like
translation: MLCSFQLCFVCGNLGASITCAEPGCGRSFHLPCASKGECVTQHFGKFRSFCREHRPQQAVEAAPEQDTTCIVCMEPVGDSMSYSTMVCPACRHAWFHRACIQEQALRAGFYCFQCPLCRDRDWFITDMHIMGIRIPIREPTWEDNDAYASLLERHGSCDASHCLYPHGREQAEGEGPWQLLLCSSCAAQGTHRRCSNLSHSAASWECNACAGEDTASSTNSDLAGDSTISQQGLGPSRGSETPESSSSSTTSHAPSGPADCSPVPESSVLEGSVTGRGRVTFYTV
SIO_010081: LOC104913096
subclass of: SO_0000673
so part of: LOC104913096
location: complement(join(917568..917620,917744..917902,918067..918185,918316..918429,918648..918754,918849..919011,919202..919344))
location: region:917568-919344:-1
so has part: feature:919202-919344:-1:exon
so has part: feature:918849-919011:-1:exon
so has part: feature:918648-918754:-1:exon
so has part: feature:918316-918429:-1:exon
so has part: feature:918067-918185:-1:exon
so has part: feature:917744-917902:-1:exon
so has part: feature:917568-917620:-1:exon

XP_031411354.1
type: Protein
SIO_000068: ncbiprotein

position:919344:-1
position: 919344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919202-919344:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918849-919011:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:918648-918754:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:918316-918429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:918067-918185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917744-917902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:917568-917620:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 927693..927792
location: region:927693-927792:1
so has part: feature:927693-927792:1:region

position:927693:1
position: 927693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:927792:1
position: 927792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927693-927792:1:region

LOC104913098
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 929205..941692
location: region:929205-941692:1
so has part: feature:929205-941692:1:exon
subclass of: SO_0000010

104913098
type: Gene
SIO_000068: ncbigene

position:929205:1
position: 929205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941692:1
position: 941692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929205-941692:1:exon

LOC104913098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913098
product: E3 ubiquitin-protein ligase RNF123-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555495.1
SIO_010081: LOC104913098
subclass of: SO_0000673
so part of: LOC104913098
location: join(929205..929210,929422..929534,930106..930185,930994..931091,931452..931636,933507..933628,934437..934534,935055..935109,935433..935518,935902..935988,936476..936543,937457..937582,938260..938374,939157..939261,939370..939495,940098..940190,940364..940437,940923..941040,941425..941692)
location: region:929205-941692:1
so has part: feature:929205-929210:1:exon
so has part: feature:929422-929534:1:exon
so has part: feature:930106-930185:1:exon
so has part: feature:930994-931091:1:exon
so has part: feature:931452-931636:1:exon
so has part: feature:933507-933628:1:exon
so has part: feature:934437-934534:1:exon
so has part: feature:935055-935109:1:exon
so has part: feature:935433-935518:1:exon
so has part: feature:935902-935988:1:exon
so has part: feature:936476-936543:1:exon
so has part: feature:937457-937582:1:exon
so has part: feature:938260-938374:1:exon
so has part: feature:939157-939261:1:exon
so has part: feature:939370-939495:1:exon
so has part: feature:940098-940190:1:exon
so has part: feature:940364-940437:1:exon
so has part: feature:940923-941040:1:exon
so has part: feature:941425-941692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:929205-929210:1:exon

position:929210:1
position: 929210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:929422-929534:1:exon

position:929422:1
position: 929422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929534:1
position: 929534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:930106-930185:1:exon

position:930106:1
position: 930106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:930185:1
position: 930185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:930994-931091:1:exon

position:930994:1
position: 930994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931091:1
position: 931091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:931452-931636:1:exon

position:931452:1
position: 931452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931636:1
position: 931636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:933507-933628:1:exon

position:933507:1
position: 933507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933628:1
position: 933628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:934437-934534:1:exon

position:934437:1
position: 934437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:934534:1
position: 934534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:935055-935109:1:exon

position:935055:1
position: 935055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935109:1
position: 935109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:935433-935518:1:exon

position:935433:1
position: 935433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935518:1
position: 935518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:935902-935988:1:exon

position:935902:1
position: 935902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:935988:1
position: 935988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:936476-936543:1:exon

position:936476:1
position: 936476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:936543:1
position: 936543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:937457-937582:1:exon

position:937457:1
position: 937457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937582:1
position: 937582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:938260-938374:1:exon

position:938260:1
position: 938260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:938374:1
position: 938374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:939157-939261:1:exon

position:939157:1
position: 939157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939261:1
position: 939261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:939370-939495:1:exon

position:939370:1
position: 939370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:939495:1
position: 939495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:940098-940190:1:exon

position:940098:1
position: 940098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940190:1
position: 940190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:940364-940437:1:exon

position:940364:1
position: 940364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:940437:1
position: 940437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:940923-941040:1:exon

position:940923:1
position: 940923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:941040:1
position: 941040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:941425-941692:1:exon

position:941425:1
position: 941425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF123-like
translation: MSHAVVAPAPKGYLGAAEILGKSKSNSYESGKSAVRGITKKHLTFQNLQEHLDRLLAEENGSEDSQDQLTEGRLGPSTVVLDHTSGFEGLLLVDDDLLRRGGGDVAPDGSELVLLVLFPEDLHLLQCQLRGEGHLQEEGQKELGEDGLGLLQDQRQLEYLRQSFLKCSCVCLFPRKHLTFQNLQEHLDRLLAEENGSEDSQDQLTEGRLGPSTVVLDHTSGFEGLLLVDDDLLRVIGHSNFGSIRATMCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVRKWNVTTTNYGKSWAAGDIVSCLIDLEEGTIAFCLNGISLGTAFDNITRGAGMAYFPAISLSFKESVAFNFGSRPLRYPVEGYRPLQDPPVADLVKARKLLGFLKNVIHIGIDVTEGKLVEKDASTWQLQGEPTVLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILERGGAVEAHPLIQQLLDLMWLLMEEYEVHECLKQLLMSLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSRKYLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAEERLRRRAYERGCQRLKKCIEGL
SIO_010081: LOC104913098
subclass of: SO_0000673
so part of: LOC104913098
location: join(929205..929210,929422..929534,930106..930185,930994..931091,931452..931636,933507..933628,934437..934534,935055..935109,935433..935518,935902..935988,936476..936543,937457..937582,938260..938374,939157..939261,939370..939495,940098..940190,940364..940437,940923..941040,941425..941532)
location: region:929205-941532:1
so has part: feature:929205-929210:1:exon
so has part: feature:929422-929534:1:exon
so has part: feature:930106-930185:1:exon
so has part: feature:930994-931091:1:exon
so has part: feature:931452-931636:1:exon
so has part: feature:933507-933628:1:exon
so has part: feature:934437-934534:1:exon
so has part: feature:935055-935109:1:exon
so has part: feature:935433-935518:1:exon
so has part: feature:935902-935988:1:exon
so has part: feature:936476-936543:1:exon
so has part: feature:937457-937582:1:exon
so has part: feature:938260-938374:1:exon
so has part: feature:939157-939261:1:exon
so has part: feature:939370-939495:1:exon
so has part: feature:940098-940190:1:exon
so has part: feature:940364-940437:1:exon
so has part: feature:940923-941040:1:exon
so has part: feature:941425-941532:1:exon

XP_031411355.1
type: Protein
SIO_000068: ncbiprotein

position:941532:1
position: 941532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929205-929210:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:929422-929534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:930106-930185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:930994-931091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:931452-931636:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:933507-933628:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:934437-934534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:935055-935109:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:935433-935518:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:935902-935988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:936476-936543:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:937457-937582:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:938260-938374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:939157-939261:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:939370-939495:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:940098-940190:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:940364-940437:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:940923-941040:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:941425-941532:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 929238..929337
location: region:929238-929337:1
so has part: feature:929238-929337:1:region

position:929238:1
position: 929238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929337:1
position: 929337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929238-929337:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 931343..931442
location: region:931343-931442:1
so has part: feature:931343-931442:1:region

position:931343:1
position: 931343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:931442:1
position: 931442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931343-931442:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 932403..932502
location: region:932403-932502:1
so has part: feature:932403-932502:1:region

position:932403:1
position: 932403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:932502:1
position: 932502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932403-932502:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 933182..933281
location: region:933182-933281:1
so has part: feature:933182-933281:1:region

position:933182:1
position: 933182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:933281:1
position: 933281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:933182-933281:1:region

RFT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <946476..960600
location: region:946476-960600:1
so has part: feature:946476-960600:1:exon
subclass of: SO_0000010

100541062
type: Gene
SIO_000068: ncbigene

position:946476:1
position: 946476
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:960600:1
position: 960600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946476-960600:1:exon

RFT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RFT1
product: RFT1 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 204 samples with support for all annotated introns
transcript id: XM_019619957.2
SIO_010081: RFT1
subclass of: SO_0000673
so part of: RFT1
location: join(<946476..946570,946691..946807,947367..947556,948149..948250,948867..949001,949734..949812,950058..950108,951489..951619,952272..952416,953787..953892,955064..955313,956278..956467,956645..960600)
location: region:946476-960600:1
so has part: feature:946476-946570:1:exon
so has part: feature:946691-946807:1:exon
so has part: feature:947367-947556:1:exon
so has part: feature:948149-948250:1:exon
so has part: feature:948867-949001:1:exon
so has part: feature:949734-949812:1:exon
so has part: feature:950058-950108:1:exon
so has part: feature:951489-951619:1:exon
so has part: feature:952272-952416:1:exon
so has part: feature:953787-953892:1:exon
so has part: feature:955064-955313:1:exon
so has part: feature:956278-956467:1:exon
so has part: feature:956645-960600:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:946476-946570:1:exon

position:946570:1
position: 946570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:946691-946807:1:exon

position:946691:1
position: 946691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:946807:1
position: 946807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:947367-947556:1:exon

position:947367:1
position: 947367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:947556:1
position: 947556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:948149-948250:1:exon

position:948149:1
position: 948149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:948250:1
position: 948250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:948867-949001:1:exon

position:948867:1
position: 948867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949001:1
position: 949001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:949734-949812:1:exon

position:949734:1
position: 949734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:949812:1
position: 949812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:950058-950108:1:exon

position:950058:1
position: 950058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950108:1
position: 950108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:951489-951619:1:exon

position:951489:1
position: 951489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:951619:1
position: 951619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:952272-952416:1:exon

position:952272:1
position: 952272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952416:1
position: 952416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:953787-953892:1:exon

position:953787:1
position: 953787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:953892:1
position: 953892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:955064-955313:1:exon

position:955064:1
position: 955064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955313:1
position: 955313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:956278-956467:1:exon

position:956278:1
position: 956278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956467:1
position: 956467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:956645-960600:1:exon

position:956645:1
position: 956645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RFT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RFT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein RFT1 homolog
translation: PPQVLFRAAAFGLNALTLRRLSRELLGVVGVRLTLLYSTAVFLAREAFRRACLSGGAERSWAATINLLWLTVPLGVFWSVSLGFVWLHFLEVPDPSVVPHYRAAVVAFGLSAVVELLGEPFWVLAQAHLFVRLKVIAESLSVVTKCILTVILVILYPQWGLYIFSLAQLLYTSVLVLCYVVYFAKFLGSPEATKKSFPVPTMKALLPNLMEDKTFLNWKEVRLTWSFFKQSFLKQILTEGERYVMTFLNVINFGDQGVYDTVNNLGSLVARFLFLPIEESFYVFFTQVLERGKNVKDQKQDDVAVAANVLELLLKLVLLIGLTIAVFGYAFSQLALDIYGGSTLSSGTGPDLLRCYSLYVLFLAVNGVTECFTFALMCKEEVDRYNFVMLALSFTFLCSSYFLTRWHGSVGFILANCLNMGIRIAHSIHYIYGYFKESSYRPLTGLFPSPFLILAYVVSGGITVCSEAFFCCDKGWTARLIHISIGALCFAATTITMFCTETKLVHFVRSQFLSQYMKKGT
SIO_010081: RFT1
subclass of: SO_0000673
so part of: RFT1
location: join(<946476..946570,946691..946807,947367..947556,948149..948250,948867..949001,949734..949812,950058..950108,951489..951619,952272..952416,953787..953892,955064..955313,956278..956442)
location: region:946476-956442:1
so has part: feature:946476-946570:1:exon
so has part: feature:946691-946807:1:exon
so has part: feature:947367-947556:1:exon
so has part: feature:948149-948250:1:exon
so has part: feature:948867-949001:1:exon
so has part: feature:949734-949812:1:exon
so has part: feature:950058-950108:1:exon
so has part: feature:951489-951619:1:exon
so has part: feature:952272-952416:1:exon
so has part: feature:953787-953892:1:exon
so has part: feature:955064-955313:1:exon
so has part: feature:956278-956442:1:exon

XP_019475502.1
type: Protein
SIO_000068: ncbiprotein

position:956442:1
position: 956442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:946476-946570:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:946691-946807:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:947367-947556:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:948149-948250:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:948867-949001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:949734-949812:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:950058-950108:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:951489-951619:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:952272-952416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:953787-953892:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:955064-955313:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:956278-956442:1:exon

LOC109369868
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(967119..970043)
location: region:967119-970043:-1
so has part: feature:967119-970043:-1:exon
subclass of: SO_0000010

109369868
type: Gene
SIO_000068: ncbigene

position:967119:-1
position: 967119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970043:-1
position: 970043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:967119-970043:-1:exon

LOC109369868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369868
product: maestro heat-like repeat-containing protein family member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031555475.1
SIO_010081: LOC109369868
subclass of: SO_0000673
so part of: LOC109369868
location: complement(join(967119..967482,967644..967781,967865..968043,968253..968400,968504..968658,968807..968956,969177..969286,969370..969550,969673..970043))
location: region:967119-970043:-1
so has part: feature:969673-970043:-1:exon
so has part: feature:969370-969550:-1:exon
so has part: feature:969177-969286:-1:exon
so has part: feature:968807-968956:-1:exon
so has part: feature:968504-968658:-1:exon
so has part: feature:968253-968400:-1:exon
so has part: feature:967865-968043:-1:exon
so has part: feature:967644-967781:-1:exon
so has part: feature:967119-967482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:969673-970043:-1:exon

position:969673:-1
position: 969673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:969370-969550:-1:exon

position:969370:-1
position: 969370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969550:-1
position: 969550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:969177-969286:-1:exon

position:969177:-1
position: 969177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969286:-1
position: 969286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:968807-968956:-1:exon

position:968807:-1
position: 968807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968956:-1
position: 968956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:968504-968658:-1:exon

position:968504:-1
position: 968504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968658:-1
position: 968658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:968253-968400:-1:exon

position:968253:-1
position: 968253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968400:-1
position: 968400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:967865-968043:-1:exon

position:967865:-1
position: 967865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:968043:-1
position: 968043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:967644-967781:-1:exon

position:967644:-1
position: 967644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967781:-1
position: 967781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:967119-967482:-1:exon

position:967482:-1
position: 967482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109369868
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369868
product: maestro heat-like repeat-containing protein family member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031555474.1
SIO_010081: LOC109369868
subclass of: SO_0000673
so part of: LOC109369868
location: complement(join(967119..967482,967644..967781,967865..968043,968253..968658,968807..968956,969177..969286,969370..969550,969673..970043))
location: region:967119-970043:-1
so has part: feature:969673-970043:-1:exon
so has part: feature:969370-969550:-1:exon
so has part: feature:969177-969286:-1:exon
so has part: feature:968807-968956:-1:exon
so has part: feature:968253-968658:-1:exon
so has part: feature:967865-968043:-1:exon
so has part: feature:967644-967781:-1:exon
so has part: feature:967119-967482:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:969673-970043:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:969370-969550:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969177-969286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968807-968956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968253-968658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967865-968043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967644-967781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:967119-967482:-1:exon

LOC109369868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: maestro heat-like repeat-containing protein family member 7 isoform X2
translation: MGGEQQEGGRAAAGRGCKHPSALQLGSERAEGRAPVLGANRQLLSPQLLLPFTMCQLAAVEERAVACIGRLLAFTNTCSLPELCSCFMGTAVFQHRCQENQRFPVLGKLAGHLILSCTSTNERTRDEAMKAVHQLFTFITTPRLSLEQKEPKVPQLWERQLALLHQEPSHEKRATTIFQVLMKYLLHPETVNVLLTTIESMTVPSLHSTGLAAHMVDMLTAEARFPPRQVRKIMKTIYNSLPSIRDKAALKSLGRALLVLTSKFPKEMVSSLLVCSPTCTRVAVTMWREMLSEPPAVEKALQELLRVLINHSQQQSSPFIKDWPRVLALAAARILPEILQLPLVLKEAQAIFPKLFLALLLQVSFTTELTQQEVEIFCEEHQQHQLTPIRSAVQALKVLLCSVGLQRQMEAIQEQGGWDALLSTVTHLQGVQVVARAMREQTTKSAHLTKATCHKSIILLQRTAEESCRKK
SIO_010081: LOC109369868
subclass of: SO_0000673
so part of: LOC109369868
location: complement(join(967374..967482,967644..967781,967865..968043,968253..968400,968504..968658,968807..968956,969177..969286,969370..969550,969673..969918))
location: region:967374-969918:-1
so has part: feature:969673-969918:-1:exon
so has part: feature:969370-969550:-1:exon
so has part: feature:969177-969286:-1:exon
so has part: feature:968807-968956:-1:exon
so has part: feature:968504-968658:-1:exon
so has part: feature:968253-968400:-1:exon
so has part: feature:967865-968043:-1:exon
so has part: feature:967644-967781:-1:exon
so has part: feature:967374-967482:-1:exon

XP_031411335.1
type: Protein
SIO_000068: ncbiprotein

position:967374:-1
position: 967374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:969918:-1
position: 969918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969673-969918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:969370-969550:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969177-969286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968807-968956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968504-968658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:968253-968400:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967865-968043:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:967644-967781:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:967374-967482:-1:exon

LOC109369868
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369868
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109369868 isoform X1
translation: MGGEQQEGGRAAAGRGCKHPSALQLGSERAEGRAPVLGANRQLLSPQLLLPFTMCQLAAVEERAVACIGRLLAFTNTCSLPELCSCFMGTAVFQHRCQENQRFPVLGKLAGHLILSCTSTNERTRDEAMKAVHQLFTFITTPRLSLEQKEPKVPQLWERQLALLHQEPSHEKRATTIFQVLMKYLLHPETVNVLLTTIESMTVPSLHSTGLAAHMVDMLTAEARFPPRQVRKIMKTIYNSLPSIRDKAALKSLGRALLVLTSKFPKEMVSSLLVCSPTCTRYRAHSPWGSSPFPSPPHGCQPGEGSHADSPGDLQGRCHHVEGNALGAPGCGEGAAGAAPSADKPFSAAVITVHQGLATRPCPGRSKDPTGDTPAASGLEGGPGHLPKALPGPPPASVLHHRADTAGGGDLLRGAPAAPAHSHQVRGAGLEGAALQRGPPEADGGHPGAGWLGRASQHRHPPPGRAGGGQGHEGTDNKVCSPY
SIO_010081: LOC109369868
subclass of: SO_0000673
so part of: LOC109369868
location: complement(join(967441..967482,967644..967781,967865..968043,968253..968658,968807..968956,969177..969286,969370..969550,969673..969918))
location: region:967441-969918:-1
so has part: feature:969673-969918:-1:exon
so has part: feature:969370-969550:-1:exon
so has part: feature:969177-969286:-1:exon
so has part: feature:968807-968956:-1:exon
so has part: feature:968253-968658:-1:exon
so has part: feature:967865-968043:-1:exon
so has part: feature:967644-967781:-1:exon
so has part: feature:967441-967482:-1:exon

XP_031411334.1
type: Protein
SIO_000068: ncbiprotein

position:967441:-1
position: 967441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:969673-969918:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:969370-969550:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:969177-969286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968807-968956:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968253-968658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:967865-968043:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:967644-967781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:967441-967482:-1:exon

LOC104909200
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104909200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(975745..982239)
location: region:975745-982239:-1
so has part: feature:975745-982239:-1:exon
subclass of: SO_0000010

104909200
type: Gene
SIO_000068: ncbigene

position:975745:-1
position: 975745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982239:-1
position: 982239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:975745-982239:-1:exon

LOC104909200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104909200
product: guanylate-binding protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_010718283.3
SIO_010081: LOC104909200
subclass of: SO_0000673
so part of: LOC104909200
location: complement(join(975745..975994,976111..976377,976460..976672,976742..977022,977128..977370,977451..977635,977719..977828,977902..978029,978094..978303,982080..982239))
location: region:975745-982239:-1
so has part: feature:982080-982239:-1:exon
so has part: feature:978094-978303:-1:exon
so has part: feature:977902-978029:-1:exon
so has part: feature:977719-977828:-1:exon
so has part: feature:977451-977635:-1:exon
so has part: feature:977128-977370:-1:exon
so has part: feature:976742-977022:-1:exon
so has part: feature:976460-976672:-1:exon
so has part: feature:976111-976377:-1:exon
so has part: feature:975745-975994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982080-982239:-1:exon

position:982080:-1
position: 982080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:978094-978303:-1:exon

position:978094:-1
position: 978094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978303:-1
position: 978303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:977902-978029:-1:exon

position:977902:-1
position: 977902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978029:-1
position: 978029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:977719-977828:-1:exon

position:977719:-1
position: 977719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977828:-1
position: 977828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:977451-977635:-1:exon

position:977451:-1
position: 977451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977635:-1
position: 977635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:977128-977370:-1:exon

position:977128:-1
position: 977128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977370:-1
position: 977370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:976742-977022:-1:exon

position:976742:-1
position: 976742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:977022:-1
position: 977022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:976460-976672:-1:exon

position:976460:-1
position: 976460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976672:-1
position: 976672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:976111-976377:-1:exon

position:976111:-1
position: 976111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976377:-1
position: 976377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:975745-975994:-1:exon

position:975994:-1
position: 975994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104909200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104909200
product: guanylate-binding protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 169 samples with support for all annotated introns
transcript id: XM_010718284.3
SIO_010081: LOC104909200
subclass of: SO_0000673
so part of: LOC104909200
location: complement(join(975745..975994,976111..976377,976460..976672,976742..977022,977128..977370,977451..977635,977719..977828,977902..978029,982080..982238))
location: region:975745-982238:-1
so has part: feature:982080-982238:-1:exon
so has part: feature:977902-978029:-1:exon
so has part: feature:977719-977828:-1:exon
so has part: feature:977451-977635:-1:exon
so has part: feature:977128-977370:-1:exon
so has part: feature:976742-977022:-1:exon
so has part: feature:976460-976672:-1:exon
so has part: feature:976111-976377:-1:exon
so has part: feature:975745-975994:-1:exon

position:982238:-1
position: 982238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982080-982238:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977902-978029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977719-977828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977451-977635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:977128-977370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976742-977022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976460-976672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976111-976377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975745-975994:-1:exon

LOC104909200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104909200
product: guanylate-binding protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 211 samples with support for all annotated introns
transcript id: XM_010718282.3
SIO_010081: LOC104909200
subclass of: SO_0000673
so part of: LOC104909200
location: complement(join(975745..975994,976111..976377,976460..976672,976742..977022,977128..977370,977451..977635,977719..977828,977902..978029,978094..979932))
location: region:975745-979932:-1
so has part: feature:978094-979932:-1:exon
so has part: feature:977902-978029:-1:exon
so has part: feature:977719-977828:-1:exon
so has part: feature:977451-977635:-1:exon
so has part: feature:977128-977370:-1:exon
so has part: feature:976742-977022:-1:exon
so has part: feature:976460-976672:-1:exon
so has part: feature:976111-976377:-1:exon
so has part: feature:975745-975994:-1:exon

position:979932:-1
position: 979932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978094-979932:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977902-978029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977719-977828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977451-977635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:977128-977370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976742-977022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976460-976672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976111-976377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975745-975994:-1:exon

LOC104909200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104909200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 1-like isoform X1
translation: MGRKGPGFTIYCSFQSVITAVSSTTMDAPVLPMPAPLCLVTNKDDVLSLNPVALAVLRSVTQPLVVVAIAGLYRTGKSFLMNQLAQKRTGFPLGPTVRAETKGIWMWCLPHPRQQGVTLVLLDTEGLGDPNKDDDDSDTWIFTLALLLSSTLVYNSIGTIDQQALEQLRLVTELTKHIRVREEDDNPASNFVRVFPSFVWTVRDFTLQLRAGEKTLSEDEYLEQVLQLQTGNGKKAKERNELRRCLRNFFPRRKLFTMERPAAAADLPRLEELREDELQPGFRKQVDAFCRYIWEKAPVKVLPGGHQVTGSALAGLAEKYVAAITSGAVPCVESAVTALARAENSAAVEAAVAEYQRGMEQGLVLPTASRSALVAVHRDCEQRAIALFLSRAFADHERQYHAELVRKLEAAKEEFCRRNEEASEQRCHAVLRELWRDVELRLQNGDYVAPGGAQLFKEDLNRVLEEYKRRPGKGVRAEAVLEAFLREREGLAQVLKATEVQLELAERQREAAAAEAEAAQQAAEARLEEQRRTMEEHQRQLEQQLKEEQRAWLEEQQRVLEHHKKEYEALVQEGFKREAAAMQELITQLQMEKKNREQGTWISSALNFLGSILAPFLPGIAGKALNKLRRM
SIO_010081: LOC104909200
subclass of: SO_0000673
so part of: LOC104909200
location: complement(join(975794..975994,976111..976377,976460..976672,976742..977022,977128..977370,977451..977635,977719..977828,977902..978029,978094..978361))
location: region:975794-978361:-1
so has part: feature:978094-978361:-1:exon
so has part: feature:977902-978029:-1:exon
so has part: feature:977719-977828:-1:exon
so has part: feature:977451-977635:-1:exon
so has part: feature:977128-977370:-1:exon
so has part: feature:976742-977022:-1:exon
so has part: feature:976460-976672:-1:exon
so has part: feature:976111-976377:-1:exon
so has part: feature:975794-975994:-1:exon

XP_010716584.1
type: Protein
SIO_000068: ncbiprotein

position:975794:-1
position: 975794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:978361:-1
position: 978361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978094-978361:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977902-978029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977719-977828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977451-977635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:977128-977370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976742-977022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976460-976672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976111-976377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975794-975994:-1:exon

LOC104909200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104909200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 1-like isoform X2
translation: MDAPVLPMPAPLCLVTNKDDVLSLNPVALAVLRSVTQPLVVVAIAGLYRTGKSFLMNQLAQKRTGFPLGPTVRAETKGIWMWCLPHPRQQGVTLVLLDTEGLGDPNKDDDDSDTWIFTLALLLSSTLVYNSIGTIDQQALEQLRLVTELTKHIRVREEDDNPASNFVRVFPSFVWTVRDFTLQLRAGEKTLSEDEYLEQVLQLQTGNGKKAKERNELRRCLRNFFPRRKLFTMERPAAAADLPRLEELREDELQPGFRKQVDAFCRYIWEKAPVKVLPGGHQVTGSALAGLAEKYVAAITSGAVPCVESAVTALARAENSAAVEAAVAEYQRGMEQGLVLPTASRSALVAVHRDCEQRAIALFLSRAFADHERQYHAELVRKLEAAKEEFCRRNEEASEQRCHAVLRELWRDVELRLQNGDYVAPGGAQLFKEDLNRVLEEYKRRPGKGVRAEAVLEAFLREREGLAQVLKATEVQLELAERQREAAAAEAEAAQQAAEARLEEQRRTMEEHQRQLEQQLKEEQRAWLEEQQRVLEHHKKEYEALVQEGFKREAAAMQELITQLQMEKKNREQGTWISSALNFLGSILAPFLPGIAGKALNKLRRM
SIO_010081: LOC104909200
subclass of: SO_0000673
so part of: LOC104909200
location: complement(join(975794..975994,976111..976377,976460..976672,976742..977022,977128..977370,977451..977635,977719..977828,977902..978029,978094..978286))
location: region:975794-978286:-1
so has part: feature:978094-978286:-1:exon
so has part: feature:977902-978029:-1:exon
so has part: feature:977719-977828:-1:exon
so has part: feature:977451-977635:-1:exon
so has part: feature:977128-977370:-1:exon
so has part: feature:976742-977022:-1:exon
so has part: feature:976460-976672:-1:exon
so has part: feature:976111-976377:-1:exon
so has part: feature:975794-975994:-1:exon

XP_010716585.1
type: Protein
SIO_000068: ncbiprotein

position:978286:-1
position: 978286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:978094-978286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977902-978029:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977719-977828:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977451-977635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:977128-977370:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976742-977022:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976460-976672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:976111-976377:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:975794-975994:-1:exon

LOC104909200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104909200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 1-like isoform X3
translation: MWCLPHPRQQGVTLVLLDTEGLGDPNKDDDDSDTWIFTLALLLSSTLVYNSIGTIDQQALEQLRLVTELTKHIRVREEDDNPASNFVRVFPSFVWTVRDFTLQLRAGEKTLSEDEYLEQVLQLQTGNGKKAKERNELRRCLRNFFPRRKLFTMERPAAAADLPRLEELREDELQPGFRKQVDAFCRYIWEKAPVKVLPGGHQVTGSALAGLAEKYVAAITSGAVPCVESAVTALARAENSAAVEAAVAEYQRGMEQGLVLPTASRSALVAVHRDCEQRAIALFLSRAFADHERQYHAELVRKLEAAKEEFCRRNEEASEQRCHAVLRELWRDVELRLQNGDYVAPGGAQLFKEDLNRVLEEYKRRPGKGVRAEAVLEAFLREREGLAQVLKATEVQLELAERQREAAAAEAEAAQQAAEARLEEQRRTMEEHQRQLEQQLKEEQRAWLEEQQRVLEHHKKEYEALVQEGFKREAAAMQELITQLQMEKKNREQGTWISSALNFLGSILAPFLPGIAGKALNKLRRM
SIO_010081: LOC104909200
subclass of: SO_0000673
so part of: LOC104909200
location: complement(join(975794..975994,976111..976377,976460..976672,976742..977022,977128..977370,977451..977635,977719..977828,977902..977982))
location: region:975794-977982:-1
so has part: feature:977902-977982:-1:exon
so has part: feature:977719-977828:-1:exon
so has part: feature:977451-977635:-1:exon
so has part: feature:977128-977370:-1:exon
so has part: feature:976742-977022:-1:exon
so has part: feature:976460-976672:-1:exon
so has part: feature:976111-976377:-1:exon
so has part: feature:975794-975994:-1:exon

XP_010716586.1
type: Protein
SIO_000068: ncbiprotein

position:977982:-1
position: 977982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:977902-977982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977719-977828:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977451-977635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:977128-977370:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:976742-977022:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:976460-976672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:976111-976377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:975794-975994:-1:exon

LOC100541213
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100541213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(982441..987123)
location: region:982441-987123:-1
so has part: feature:982441-987123:-1:exon
subclass of: SO_0000010

100541213
type: Gene
SIO_000068: ncbigene

position:982441:-1
position: 982441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:987123:-1
position: 987123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982441-987123:-1:exon

LOC100541213
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100541213
product: guanylate-binding protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 197 samples with support for all annotated introns
transcript id: XM_010718286.3
SIO_010081: LOC100541213
subclass of: SO_0000673
so part of: LOC100541213
location: complement(join(982441..982895,983404..983506,983580..983792,984005..984279,984892..985134,985217..985434,986091..986200,986281..986408,986494..987123))
location: region:982441-987123:-1
so has part: feature:986494-987123:-1:exon
so has part: feature:986281-986408:-1:exon
so has part: feature:986091-986200:-1:exon
so has part: feature:985217-985434:-1:exon
so has part: feature:984892-985134:-1:exon
so has part: feature:984005-984279:-1:exon
so has part: feature:983580-983792:-1:exon
so has part: feature:983404-983506:-1:exon
so has part: feature:982441-982895:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:986494-987123:-1:exon

position:986494:-1
position: 986494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:986281-986408:-1:exon

position:986281:-1
position: 986281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986408:-1
position: 986408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:986091-986200:-1:exon

position:986091:-1
position: 986091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986200:-1
position: 986200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:985217-985434:-1:exon

position:985217:-1
position: 985217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985434:-1
position: 985434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:984892-985134:-1:exon

position:984892:-1
position: 984892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985134:-1
position: 985134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:984005-984279:-1:exon

position:984005:-1
position: 984005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:984279:-1
position: 984279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:983580-983792:-1:exon

position:983580:-1
position: 983580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983792:-1
position: 983792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:983404-983506:-1:exon

position:983404:-1
position: 983404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:983506:-1
position: 983506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:982441-982895:-1:exon

position:982895:-1
position: 982895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100541213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100541213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanylate-binding protein 1-like
translation: MDAPMLPMPAPLCLVNNKDGVLSLDPTALAVLQEVAQPLVVVAIAGPYRTGKSFLMNRLAEKRSGFPLGPTVQAETKGIWMWCLPHPRRPGVMLVLLDTEGLGDPSKGDSQNDAWIFTLALLLSSTLVYNSIGTIDQKALEHLELVTQLSELIQVRDGEKDGNNSVEREDEAEDCEFVRFFPGFVWVVRDFTLELRVGEQPISEDEYLEQALELKHGHGRKVQIYNGTRLCLRNYFPTRKCFVLPSPLGTEEHGRMEELPEAALAPRFLQQAAKFCDYVLNSAWPKTLPDGGALTGRALSMLLSSYVEAINSGRLPCLEGAAAAMMANENAAAVTAALEAYARGMRGLSLPTEPAQLSASHGEHLREALVVFQRRSFRDPDQEHQRRLMEQISTEYSRLQEENDAASRRRCKALLAELARALNASLARGAYAQPGGYRAYEAERQQLLEAYQQAAGKGPKAEEVLDEFLAERRAEAEAVLKADNALSEAEKQLEDQKQQAQLLEQQQKATAERERQLEALLADERSSYAQSLQALQTKMQEEAASAQRELDRALKAKLREHSELLQRGFSERAALIEQELAALRREIDSSNKQELAASAFNAVRAACELAAVLTHGEFRGTAAMATARRKTSARPSLAAK
SIO_010081: LOC100541213
subclass of: SO_0000673
so part of: LOC100541213
location: complement(join(982456..982895,983404..983506,983580..983792,984005..984279,984892..985134,985217..985434,986091..986200,986281..986408,986494..986686))
location: region:982456-986686:-1
so has part: feature:986494-986686:-1:exon
so has part: feature:986281-986408:-1:exon
so has part: feature:986091-986200:-1:exon
so has part: feature:985217-985434:-1:exon
so has part: feature:984892-985134:-1:exon
so has part: feature:984005-984279:-1:exon
so has part: feature:983580-983792:-1:exon
so has part: feature:983404-983506:-1:exon
so has part: feature:982456-982895:-1:exon

XP_010716588.1
type: Protein
SIO_000068: ncbiprotein

position:982456:-1
position: 982456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986686:-1
position: 986686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986494-986686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:986281-986408:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:986091-986200:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:985217-985434:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:984892-985134:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:984005-984279:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:983580-983792:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:983404-983506:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:982456-982895:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 987620..987719
location: region:987620-987719:1
so has part: feature:987620-987719:1:region

position:987620:1
position: 987620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987719:1
position: 987719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:987620-987719:1:region

LOC104913099
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913099
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(990960..1008847)
location: region:990960-1008847:-1
so has part: feature:990960-1008847:-1:exon
subclass of: SO_0000011

104913099
type: Gene
SIO_000068: ncbigene

position:990960:-1
position: 990960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008847:-1
position: 1008847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:990960-1008847:-1:exon

LOC104913099
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913099
product: uncharacterized LOC104913099, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_002119502.1
SIO_010081: LOC104913099
subclass of: SO_0000673
so part of: LOC104913099
location: complement(join(990960..994502,998834..999006,1004758..1008847))
location: region:990960-1008847:-1
so has part: feature:1004758-1008847:-1:exon
so has part: feature:998834-999006:-1:exon
so has part: feature:990960-994502:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004758-1008847:-1:exon

position:1004758:-1
position: 1004758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:998834-999006:-1:exon

position:998834:-1
position: 998834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999006:-1
position: 999006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:990960-994502:-1:exon

position:994502:-1
position: 994502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913099
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913099
product: uncharacterized LOC104913099, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_795129.2
SIO_010081: LOC104913099
subclass of: SO_0000673
so part of: LOC104913099
location: complement(join(990960..994502,998834..999006,1002901..1003142,1004758..1008847))
location: region:990960-1008847:-1
so has part: feature:1004758-1008847:-1:exon
so has part: feature:1002901-1003142:-1:exon
so has part: feature:998834-999006:-1:exon
so has part: feature:990960-994502:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1004758-1008847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002901-1003142:-1:exon

position:1002901:-1
position: 1002901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003142:-1
position: 1003142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:998834-999006:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:990960-994502:-1:exon

LOC104913100
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913100
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1010772..1023296)
location: region:1010772-1023296:-1
so has part: feature:1010772-1023296:-1:exon
subclass of: SO_0000011

104913100
type: Gene
SIO_000068: ncbigene

position:1010772:-1
position: 1010772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023296:-1
position: 1023296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010772-1023296:-1:exon

LOC104913100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913100
product: uncharacterized LOC104913100, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002119496.2
SIO_010081: LOC104913100
subclass of: SO_0000673
so part of: LOC104913100
location: complement(join(1010772..1010873,1018066..1018204,1018303..1019258,1019479..1019635,1020483..1021934,1022420..1022495,1022983..1023296))
location: region:1010772-1023296:-1
so has part: feature:1022983-1023296:-1:exon
so has part: feature:1022420-1022495:-1:exon
so has part: feature:1020483-1021934:-1:exon
so has part: feature:1019479-1019635:-1:exon
so has part: feature:1018303-1019258:-1:exon
so has part: feature:1018066-1018204:-1:exon
so has part: feature:1010772-1010873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1022983-1023296:-1:exon

position:1022983:-1
position: 1022983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1022420-1022495:-1:exon

position:1022420:-1
position: 1022420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1022495:-1
position: 1022495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1020483-1021934:-1:exon

position:1020483:-1
position: 1020483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1021934:-1
position: 1021934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1019479-1019635:-1:exon

position:1019479:-1
position: 1019479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019635:-1
position: 1019635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1018303-1019258:-1:exon

position:1018303:-1
position: 1018303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019258:-1
position: 1019258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1018066-1018204:-1:exon

position:1018066:-1
position: 1018066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018204:-1
position: 1018204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1010772-1010873:-1:exon

position:1010873:-1
position: 1010873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913100
product: uncharacterized LOC104913100, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_002119495.2
SIO_010081: LOC104913100
subclass of: SO_0000673
so part of: LOC104913100
location: complement(join(1010772..1010873,1018066..1018204,1018303..1019258,1019479..1019635,1020483..1021934,1022983..1023079,1023164..1023295))
location: region:1010772-1023295:-1
so has part: feature:1023164-1023295:-1:exon
so has part: feature:1022983-1023079:-1:exon
so has part: feature:1020483-1021934:-1:exon
so has part: feature:1019479-1019635:-1:exon
so has part: feature:1018303-1019258:-1:exon
so has part: feature:1018066-1018204:-1:exon
so has part: feature:1010772-1010873:-1:exon

position:1023295:-1
position: 1023295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1023164-1023295:-1:exon

position:1023164:-1
position: 1023164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1022983-1023079:-1:exon

position:1023079:-1
position: 1023079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1020483-1021934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1019479-1019635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018303-1019258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1018066-1018204:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1010772-1010873:-1:exon

LOC104913100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913100
product: uncharacterized LOC104913100, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_795134.3
SIO_010081: LOC104913100
subclass of: SO_0000673
so part of: LOC104913100
location: complement(join(1010772..1010873,1018066..1018204,1018303..1019258,1019479..1019635,1020483..1021934,1022983..1023295))
location: region:1010772-1023295:-1
so has part: feature:1022983-1023295:-1:exon
so has part: feature:1020483-1021934:-1:exon
so has part: feature:1019479-1019635:-1:exon
so has part: feature:1018303-1019258:-1:exon
so has part: feature:1018066-1018204:-1:exon
so has part: feature:1010772-1010873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1022983-1023295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020483-1021934:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019479-1019635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1018303-1019258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018066-1018204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010772-1010873:-1:exon

LOC104913100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913100
product: uncharacterized LOC104913100, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_795131.3
SIO_010081: LOC104913100
subclass of: SO_0000673
so part of: LOC104913100
location: complement(join(1010772..1010873,1018066..1018204,1019061..1019258,1019479..1019635,1020483..1021934,1022983..1023294))
location: region:1010772-1023294:-1
so has part: feature:1022983-1023294:-1:exon
so has part: feature:1020483-1021934:-1:exon
so has part: feature:1019479-1019635:-1:exon
so has part: feature:1019061-1019258:-1:exon
so has part: feature:1018066-1018204:-1:exon
so has part: feature:1010772-1010873:-1:exon

position:1023294:-1
position: 1023294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022983-1023294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1020483-1021934:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019479-1019635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1019061-1019258:-1:exon

position:1019061:-1
position: 1019061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1018066-1018204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010772-1010873:-1:exon

LOC104913100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913100
product: uncharacterized LOC104913100, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XR_002119497.2
SIO_010081: LOC104913100
subclass of: SO_0000673
so part of: LOC104913100
location: complement(join(1010772..1010873,1018066..1018204,1018303..1019258,1019479..1019635,1021494..1021934,1022983..1023293))
location: region:1010772-1023293:-1
so has part: feature:1022983-1023293:-1:exon
so has part: feature:1021494-1021934:-1:exon
so has part: feature:1019479-1019635:-1:exon
so has part: feature:1018303-1019258:-1:exon
so has part: feature:1018066-1018204:-1:exon
so has part: feature:1010772-1010873:-1:exon

position:1023293:-1
position: 1023293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1022983-1023293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1021494-1021934:-1:exon

position:1021494:-1
position: 1021494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1019479-1019635:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1018303-1019258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018066-1018204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010772-1010873:-1:exon

LOC104913100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104913100
product: uncharacterized LOC104913100, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_002119494.2
SIO_010081: LOC104913100
subclass of: SO_0000673
so part of: LOC104913100
location: complement(join(1010772..1010873,1018066..1018204,1018303..1019258,1019479..1019635,1020483..1020557,1021494..1021934,1022983..1023293))
location: region:1010772-1023293:-1
so has part: feature:1022983-1023293:-1:exon
so has part: feature:1021494-1021934:-1:exon
so has part: feature:1020483-1020557:-1:exon
so has part: feature:1019479-1019635:-1:exon
so has part: feature:1018303-1019258:-1:exon
so has part: feature:1018066-1018204:-1:exon
so has part: feature:1010772-1010873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1022983-1023293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1021494-1021934:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1020483-1020557:-1:exon

position:1020557:-1
position: 1020557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1019479-1019635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1018303-1019258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1018066-1018204:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1010772-1010873:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1033916..1034015
location: region:1033916-1034015:1
so has part: feature:1033916-1034015:1:region

position:1033916:1
position: 1033916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034015:1
position: 1034015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1033916-1034015:1:region

RBM15B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RBM15B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1039743..1041942
location: region:1039743-1041942:1
so has part: feature:1039743-1041942:1:exon
subclass of: SO_0000010

100545650
type: Gene
SIO_000068: ncbigene

position:1039743:1
position: 1039743
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1041942:1
position: 1041942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039743-1041942:1:exon

RBM15B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBM15B
product: RNA binding motif protein 15B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010718311.2
SIO_010081: RBM15B
subclass of: SO_0000673
so part of: RBM15B
location: <1039743..1041942
location: region:1039743-1041942:1
so has part: feature:1039743-1041942:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1039743-1041942:1:exon

RBM15B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBM15B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative RNA-binding protein 15B
translation: APSPEPLGYLPPLHGAYQYKQRSLSPVTSPLLREPRPRHAHAAAAAFALEAAAIGLSRERERALDYYGLYDERGRPYSYPIVAEEDLMPEDDQRATRNLFIGNLDHNVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKVAMSGRVVGRNPIKIGYGKANPTTRLWVGGLGPSTSLAALAREFDRFGSIRTIDYVKGDSFAYIQYESLDAAQAACAQMRGFPLGGPERRLRVDFAKAEETRYPQQYQPAPLPVHYELLADGYSRHRSLEQDLRVRDRTPPHLLYSDRDRSFAEADWASPAKNAERRNNLESYSRSVRSRSGERWASDSDRAMPKVWEERRKRRSLSSDRGRTTHSPYEDRSRTKASGPALDRSPERVRKENHTTESGTEKEQSNSLQNNRHTTEEKPHREASDAPQPKKRDSERNHRTGESESKTHEEPKSETKKLKNLSEYAQTLQLAWNGLLVLKNSCFPTSMHILEGDLGVINGLLKDHSSGGKLTQLKIAQRLRLDQPKLDEVTRRIKQGSPNGYAVLLATQSAPGSAGTEGSFPVVEPGLQRRLLRNLVSYLKQKQAAGVISLPVGGAKGRDSTGMLYAFPPCEFSQQYLQSALRTLGKLEEEHMVIVIVKDTA
SIO_010081: RBM15B
subclass of: SO_0000673
so part of: RBM15B
location: <1039743..1041677
location: region:1039743-1041677:1
so has part: feature:1039743-1041677:1:exon

XP_010716613.1
type: Protein
SIO_000068: ncbiprotein

position:1041677:1
position: 1041677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039743-1041677:1:exon

DCAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DCAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1046776..1093550)
location: region:1046776-1093550:-1
so has part: feature:1046776-1093550:-1:exon
subclass of: SO_0000010

100545803
type: Gene
SIO_000068: ncbigene

position:1046776:-1
position: 1046776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093550:-1
position: 1093550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046776-1093550:-1:exon

DCAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DCAF1
product: DDB1 and CUL4 associated factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019619895.2
SIO_010081: DCAF1
subclass of: SO_0000673
so part of: DCAF1
location: complement(join(1046776..1047792,1051310..1051565,1059483..1059488,1064079..1064183,1064756..1064829,1065631..1065735,1066244..1066337,1066838..1067071,1067989..1068073,1069290..1069372,1070058..1070256,1071037..1072297,1073749..1073873,1075526..1075695,1076567..1076776,1077736..1077915,1080342..1080500,1082281..1082382,1083585..1084085,1085092..1085229,1087643..1087756,1088591..1088664,1088975..1089051,1093411..1093550))
location: region:1046776-1093550:-1
so has part: feature:1093411-1093550:-1:exon
so has part: feature:1088975-1089051:-1:exon
so has part: feature:1088591-1088664:-1:exon
so has part: feature:1087643-1087756:-1:exon
so has part: feature:1085092-1085229:-1:exon
so has part: feature:1083585-1084085:-1:exon
so has part: feature:1082281-1082382:-1:exon
so has part: feature:1080342-1080500:-1:exon
so has part: feature:1077736-1077915:-1:exon
so has part: feature:1076567-1076776:-1:exon
so has part: feature:1075526-1075695:-1:exon
so has part: feature:1073749-1073873:-1:exon
so has part: feature:1071037-1072297:-1:exon
so has part: feature:1070058-1070256:-1:exon
so has part: feature:1069290-1069372:-1:exon
so has part: feature:1067989-1068073:-1:exon
so has part: feature:1066838-1067071:-1:exon
so has part: feature:1066244-1066337:-1:exon
so has part: feature:1065631-1065735:-1:exon
so has part: feature:1064756-1064829:-1:exon
so has part: feature:1064079-1064183:-1:exon
so has part: feature:1059483-1059488:-1:exon
so has part: feature:1051310-1051565:-1:exon
so has part: feature:1046776-1047792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1093411-1093550:-1:exon

position:1093411:-1
position: 1093411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1088975-1089051:-1:exon

position:1088975:-1
position: 1088975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1089051:-1
position: 1089051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1088591-1088664:-1:exon

position:1088591:-1
position: 1088591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1088664:-1
position: 1088664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1087643-1087756:-1:exon

position:1087643:-1
position: 1087643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087756:-1
position: 1087756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1085092-1085229:-1:exon

position:1085092:-1
position: 1085092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1085229:-1
position: 1085229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1083585-1084085:-1:exon

position:1083585:-1
position: 1083585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084085:-1
position: 1084085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1082281-1082382:-1:exon

position:1082281:-1
position: 1082281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1082382:-1
position: 1082382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1080342-1080500:-1:exon

position:1080342:-1
position: 1080342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080500:-1
position: 1080500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1077736-1077915:-1:exon

position:1077736:-1
position: 1077736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077915:-1
position: 1077915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1076567-1076776:-1:exon

position:1076567:-1
position: 1076567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076776:-1
position: 1076776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1075526-1075695:-1:exon

position:1075526:-1
position: 1075526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075695:-1
position: 1075695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1073749-1073873:-1:exon

position:1073749:-1
position: 1073749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073873:-1
position: 1073873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1071037-1072297:-1:exon

position:1071037:-1
position: 1071037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1072297:-1
position: 1072297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1070058-1070256:-1:exon

position:1070058:-1
position: 1070058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070256:-1
position: 1070256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1069290-1069372:-1:exon

position:1069290:-1
position: 1069290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069372:-1
position: 1069372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1067989-1068073:-1:exon

position:1067989:-1
position: 1067989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068073:-1
position: 1068073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1066838-1067071:-1:exon

position:1066838:-1
position: 1066838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067071:-1
position: 1067071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1066244-1066337:-1:exon

position:1066244:-1
position: 1066244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1066337:-1
position: 1066337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1065631-1065735:-1:exon

position:1065631:-1
position: 1065631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1065735:-1
position: 1065735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1064756-1064829:-1:exon

position:1064756:-1
position: 1064756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064829:-1
position: 1064829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1064079-1064183:-1:exon

position:1064079:-1
position: 1064079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064183:-1
position: 1064183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1059483-1059488:-1:exon

position:1059483:-1
position: 1059483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059488:-1
position: 1059488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1051310-1051565:-1:exon

position:1051310:-1
position: 1051310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1051565:-1
position: 1051565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1046776-1047792:-1:exon

position:1047792:-1
position: 1047792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DCAF1
product: DDB1 and CUL4 associated factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_019619894.2
SIO_010081: DCAF1
subclass of: SO_0000673
so part of: DCAF1
location: complement(join(1046776..1047792,1051310..1051565,1059483..1059491,1064079..1064183,1064756..1064829,1065631..1065735,1066244..1066337,1066838..1067071,1067989..1068073,1069290..1069372,1070058..1070256,1071037..1072297,1073749..1073873,1075526..1075695,1076567..1076776,1077736..1077915,1080342..1080500,1082281..1082382,1083585..1084085,1085092..1085229,1087643..1087756,1088591..1088664,1088975..1089051,1093411..1093550))
location: region:1046776-1093550:-1
so has part: feature:1093411-1093550:-1:exon
so has part: feature:1088975-1089051:-1:exon
so has part: feature:1088591-1088664:-1:exon
so has part: feature:1087643-1087756:-1:exon
so has part: feature:1085092-1085229:-1:exon
so has part: feature:1083585-1084085:-1:exon
so has part: feature:1082281-1082382:-1:exon
so has part: feature:1080342-1080500:-1:exon
so has part: feature:1077736-1077915:-1:exon
so has part: feature:1076567-1076776:-1:exon
so has part: feature:1075526-1075695:-1:exon
so has part: feature:1073749-1073873:-1:exon
so has part: feature:1071037-1072297:-1:exon
so has part: feature:1070058-1070256:-1:exon
so has part: feature:1069290-1069372:-1:exon
so has part: feature:1067989-1068073:-1:exon
so has part: feature:1066838-1067071:-1:exon
so has part: feature:1066244-1066337:-1:exon
so has part: feature:1065631-1065735:-1:exon
so has part: feature:1064756-1064829:-1:exon
so has part: feature:1064079-1064183:-1:exon
so has part: feature:1059483-1059491:-1:exon
so has part: feature:1051310-1051565:-1:exon
so has part: feature:1046776-1047792:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1093411-1093550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088975-1089051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088591-1088664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087643-1087756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085092-1085229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083585-1084085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082281-1082382:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080342-1080500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077736-1077915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076567-1076776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075526-1075695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073749-1073873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071037-1072297:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1070058-1070256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069290-1069372:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067989-1068073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066838-1067071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1066244-1066337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1065631-1065735:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064756-1064829:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064079-1064183:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1059483-1059491:-1:exon

position:1059491:-1
position: 1059491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1051310-1051565:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1046776-1047792:-1:exon

DCAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DCAF1
product: DDB1 and CUL4 associated factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 201 samples with support for all annotated introns
transcript id: XM_010718289.3
SIO_010081: DCAF1
subclass of: SO_0000673
so part of: DCAF1
location: complement(join(1046776..1047792,1051310..1051565,1064079..1064183,1064756..1064829,1065631..1065735,1066244..1066337,1066838..1067071,1067989..1068073,1069290..1069372,1070058..1070256,1071037..1072297,1073749..1073873,1075526..1075695,1076567..1076776,1077736..1077915,1080342..1080500,1082281..1082382,1083585..1084085,1085092..1085229,1087643..1087756,1088591..1088664,1088975..1089051,1093411..1093549))
location: region:1046776-1093549:-1
so has part: feature:1093411-1093549:-1:exon
so has part: feature:1088975-1089051:-1:exon
so has part: feature:1088591-1088664:-1:exon
so has part: feature:1087643-1087756:-1:exon
so has part: feature:1085092-1085229:-1:exon
so has part: feature:1083585-1084085:-1:exon
so has part: feature:1082281-1082382:-1:exon
so has part: feature:1080342-1080500:-1:exon
so has part: feature:1077736-1077915:-1:exon
so has part: feature:1076567-1076776:-1:exon
so has part: feature:1075526-1075695:-1:exon
so has part: feature:1073749-1073873:-1:exon
so has part: feature:1071037-1072297:-1:exon
so has part: feature:1070058-1070256:-1:exon
so has part: feature:1069290-1069372:-1:exon
so has part: feature:1067989-1068073:-1:exon
so has part: feature:1066838-1067071:-1:exon
so has part: feature:1066244-1066337:-1:exon
so has part: feature:1065631-1065735:-1:exon
so has part: feature:1064756-1064829:-1:exon
so has part: feature:1064079-1064183:-1:exon
so has part: feature:1051310-1051565:-1:exon
so has part: feature:1046776-1047792:-1:exon

position:1093549:-1
position: 1093549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093411-1093549:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088975-1089051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088591-1088664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087643-1087756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085092-1085229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083585-1084085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082281-1082382:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080342-1080500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077736-1077915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076567-1076776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075526-1075695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073749-1073873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071037-1072297:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1070058-1070256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069290-1069372:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067989-1068073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066838-1067071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1066244-1066337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1065631-1065735:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064756-1064829:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064079-1064183:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1051310-1051565:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1046776-1047792:-1:exon

DCAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DCAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 1 isoform X3
translation: MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDRHPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLRELQVTEMTTKQENKRPSPRKVPSDSLLPLDEEAVDMDYGEMAVDGEQEVAGDMEISFHLDSSHKTSSRVSSSTKLDDVGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSSWSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLKRTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSLQRTEGGVLVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQLISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRITFPEKELLLLIRNHLISKGLGETASILTKEADLPMTAASHSSAFTPVAAAASPVALPRTPRIANGISARLGSHTSVGSAATSVHAQARPPASQGPLALPGPSYASNSPLIGRISFVRERPSPCNSRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDQYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDELLEERMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDSMNMDTVCRLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENNENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDIILTLNE
SIO_010081: DCAF1
subclass of: SO_0000673
so part of: DCAF1
location: complement(join(1047734..1047792,1051310..1051565,1064079..1064183,1064756..1064829,1065631..1065735,1066244..1066337,1066838..1067071,1067989..1068073,1069290..1069372,1070058..1070256,1071037..1072297,1073749..1073873,1075526..1075695,1076567..1076776,1077736..1077915,1080342..1080500,1082281..1082382,1083585..1084085,1085092..1085229,1087643..1087756,1088591..1088664,1088975..1089051,1093411..1093520))
location: region:1047734-1093520:-1
so has part: feature:1093411-1093520:-1:exon
so has part: feature:1088975-1089051:-1:exon
so has part: feature:1088591-1088664:-1:exon
so has part: feature:1087643-1087756:-1:exon
so has part: feature:1085092-1085229:-1:exon
so has part: feature:1083585-1084085:-1:exon
so has part: feature:1082281-1082382:-1:exon
so has part: feature:1080342-1080500:-1:exon
so has part: feature:1077736-1077915:-1:exon
so has part: feature:1076567-1076776:-1:exon
so has part: feature:1075526-1075695:-1:exon
so has part: feature:1073749-1073873:-1:exon
so has part: feature:1071037-1072297:-1:exon
so has part: feature:1070058-1070256:-1:exon
so has part: feature:1069290-1069372:-1:exon
so has part: feature:1067989-1068073:-1:exon
so has part: feature:1066838-1067071:-1:exon
so has part: feature:1066244-1066337:-1:exon
so has part: feature:1065631-1065735:-1:exon
so has part: feature:1064756-1064829:-1:exon
so has part: feature:1064079-1064183:-1:exon
so has part: feature:1051310-1051565:-1:exon
so has part: feature:1047734-1047792:-1:exon

XP_010716591.1
type: Protein
SIO_000068: ncbiprotein

position:1047734:-1
position: 1047734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093520:-1
position: 1093520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093411-1093520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088975-1089051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088591-1088664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087643-1087756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085092-1085229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083585-1084085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082281-1082382:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080342-1080500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077736-1077915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076567-1076776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075526-1075695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073749-1073873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071037-1072297:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1070058-1070256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069290-1069372:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067989-1068073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066838-1067071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1066244-1066337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1065631-1065735:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064756-1064829:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064079-1064183:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1051310-1051565:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1047734-1047792:-1:exon

DCAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DCAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 1 isoform X2
translation: MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDRHPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLRELQVTEMTTKQENKRPSPRKVPSDSLLPLDEEAVDMDYGEMAVDGEQEVAGDMEISFHLDSSHKTSSRVSSSTKLDDVGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSSWSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLKRTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSLQRTEGGVLVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQLISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRITFPEKELLLLIRNHLISKGLGETASILTKEADLPMTAASHSSAFTPVAAAASPVALPRTPRIANGISARLGSHTSVGSAATSVHAQARPPASQGPLALPGPSYASNSPLIGRISFVRERPSPCNSRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDQYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDELLEERMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDSMNMDTVCRLYEVGRQRLAEDEEDEEEDQDMEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENNENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDIILTLNE
SIO_010081: DCAF1
subclass of: SO_0000673
so part of: DCAF1
location: complement(join(1047734..1047792,1051310..1051565,1059483..1059488,1064079..1064183,1064756..1064829,1065631..1065735,1066244..1066337,1066838..1067071,1067989..1068073,1069290..1069372,1070058..1070256,1071037..1072297,1073749..1073873,1075526..1075695,1076567..1076776,1077736..1077915,1080342..1080500,1082281..1082382,1083585..1084085,1085092..1085229,1087643..1087756,1088591..1088664,1088975..1089051,1093411..1093520))
location: region:1047734-1093520:-1
so has part: feature:1093411-1093520:-1:exon
so has part: feature:1088975-1089051:-1:exon
so has part: feature:1088591-1088664:-1:exon
so has part: feature:1087643-1087756:-1:exon
so has part: feature:1085092-1085229:-1:exon
so has part: feature:1083585-1084085:-1:exon
so has part: feature:1082281-1082382:-1:exon
so has part: feature:1080342-1080500:-1:exon
so has part: feature:1077736-1077915:-1:exon
so has part: feature:1076567-1076776:-1:exon
so has part: feature:1075526-1075695:-1:exon
so has part: feature:1073749-1073873:-1:exon
so has part: feature:1071037-1072297:-1:exon
so has part: feature:1070058-1070256:-1:exon
so has part: feature:1069290-1069372:-1:exon
so has part: feature:1067989-1068073:-1:exon
so has part: feature:1066838-1067071:-1:exon
so has part: feature:1066244-1066337:-1:exon
so has part: feature:1065631-1065735:-1:exon
so has part: feature:1064756-1064829:-1:exon
so has part: feature:1064079-1064183:-1:exon
so has part: feature:1059483-1059488:-1:exon
so has part: feature:1051310-1051565:-1:exon
so has part: feature:1047734-1047792:-1:exon

XP_019475440.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1093411-1093520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088975-1089051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088591-1088664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087643-1087756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085092-1085229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083585-1084085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082281-1082382:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080342-1080500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077736-1077915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076567-1076776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075526-1075695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073749-1073873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071037-1072297:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1070058-1070256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069290-1069372:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067989-1068073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066838-1067071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1066244-1066337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1065631-1065735:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064756-1064829:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064079-1064183:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1059483-1059488:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1051310-1051565:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1047734-1047792:-1:exon

DCAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DCAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 1 isoform X1
translation: MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDRHPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLRELQVTEMTTKQENKRPSPRKVPSDSLLPLDEEAVDMDYGEMAVDGEQEVAGDMEISFHLDSSHKTSSRVSSSTKLDDVGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSSWSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLKRTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSLQRTEGGVLVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQLISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRITFPEKELLLLIRNHLISKGLGETASILTKEADLPMTAASHSSAFTPVAAAASPVALPRTPRIANGISARLGSHTSVGSAATSVHAQARPPASQGPLALPGPSYASNSPLIGRISFVRERPSPCNSRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDQYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDELLEERMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDSMNMDTVCRLYEVGRQRLAEDEEDEEEDQKDMEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENNENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDIILTLNE
SIO_010081: DCAF1
subclass of: SO_0000673
so part of: DCAF1
location: complement(join(1047734..1047792,1051310..1051565,1059483..1059491,1064079..1064183,1064756..1064829,1065631..1065735,1066244..1066337,1066838..1067071,1067989..1068073,1069290..1069372,1070058..1070256,1071037..1072297,1073749..1073873,1075526..1075695,1076567..1076776,1077736..1077915,1080342..1080500,1082281..1082382,1083585..1084085,1085092..1085229,1087643..1087756,1088591..1088664,1088975..1089051,1093411..1093520))
location: region:1047734-1093520:-1
so has part: feature:1093411-1093520:-1:exon
so has part: feature:1088975-1089051:-1:exon
so has part: feature:1088591-1088664:-1:exon
so has part: feature:1087643-1087756:-1:exon
so has part: feature:1085092-1085229:-1:exon
so has part: feature:1083585-1084085:-1:exon
so has part: feature:1082281-1082382:-1:exon
so has part: feature:1080342-1080500:-1:exon
so has part: feature:1077736-1077915:-1:exon
so has part: feature:1076567-1076776:-1:exon
so has part: feature:1075526-1075695:-1:exon
so has part: feature:1073749-1073873:-1:exon
so has part: feature:1071037-1072297:-1:exon
so has part: feature:1070058-1070256:-1:exon
so has part: feature:1069290-1069372:-1:exon
so has part: feature:1067989-1068073:-1:exon
so has part: feature:1066838-1067071:-1:exon
so has part: feature:1066244-1066337:-1:exon
so has part: feature:1065631-1065735:-1:exon
so has part: feature:1064756-1064829:-1:exon
so has part: feature:1064079-1064183:-1:exon
so has part: feature:1059483-1059491:-1:exon
so has part: feature:1051310-1051565:-1:exon
so has part: feature:1047734-1047792:-1:exon

XP_019475439.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1093411-1093520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088975-1089051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088591-1088664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087643-1087756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085092-1085229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083585-1084085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082281-1082382:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080342-1080500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077736-1077915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076567-1076776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075526-1075695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073749-1073873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071037-1072297:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1070058-1070256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069290-1069372:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067989-1068073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066838-1067071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1066244-1066337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1065631-1065735:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064756-1064829:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064079-1064183:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1059483-1059491:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1051310-1051565:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1047734-1047792:-1:exon

DCAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DCAF1
product: DDB1 and CUL4 associated factor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019619896.2
SIO_010081: DCAF1
subclass of: SO_0000673
so part of: DCAF1
location: complement(join(1047812..1048709,1051310..1051565,1059483..1059491,1064079..1064183,1064756..1064829,1065631..1065735,1066244..1066337,1066838..1067071,1067989..1068073,1069290..1069372,1070058..1070256,1071037..1072297,1073749..1073873,1075526..1075695,1076567..1076776,1077736..1077915,1080342..1080500,1082281..1082382,1083585..1084085,1085092..1085229,1087643..1087756,1088591..1088664,1088975..1089051,1093411..1093550))
location: region:1047812-1093550:-1
so has part: feature:1093411-1093550:-1:exon
so has part: feature:1088975-1089051:-1:exon
so has part: feature:1088591-1088664:-1:exon
so has part: feature:1087643-1087756:-1:exon
so has part: feature:1085092-1085229:-1:exon
so has part: feature:1083585-1084085:-1:exon
so has part: feature:1082281-1082382:-1:exon
so has part: feature:1080342-1080500:-1:exon
so has part: feature:1077736-1077915:-1:exon
so has part: feature:1076567-1076776:-1:exon
so has part: feature:1075526-1075695:-1:exon
so has part: feature:1073749-1073873:-1:exon
so has part: feature:1071037-1072297:-1:exon
so has part: feature:1070058-1070256:-1:exon
so has part: feature:1069290-1069372:-1:exon
so has part: feature:1067989-1068073:-1:exon
so has part: feature:1066838-1067071:-1:exon
so has part: feature:1066244-1066337:-1:exon
so has part: feature:1065631-1065735:-1:exon
so has part: feature:1064756-1064829:-1:exon
so has part: feature:1064079-1064183:-1:exon
so has part: feature:1059483-1059491:-1:exon
so has part: feature:1051310-1051565:-1:exon
so has part: feature:1047812-1048709:-1:exon

position:1047812:-1
position: 1047812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093411-1093550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088975-1089051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088591-1088664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087643-1087756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085092-1085229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083585-1084085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082281-1082382:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080342-1080500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077736-1077915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076567-1076776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075526-1075695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073749-1073873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071037-1072297:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1070058-1070256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069290-1069372:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067989-1068073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066838-1067071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1066244-1066337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1065631-1065735:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064756-1064829:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064079-1064183:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1059483-1059491:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1051310-1051565:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1047812-1048709:-1:exon

position:1048709:-1
position: 1048709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DCAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 1 isoform X4
translation: MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDRHPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLRELQVTEMTTKQENKRPSPRKVPSDSLLPLDEEAVDMDYGEMAVDGEQEVAGDMEISFHLDSSHKTSSRVSSSTKLDDVGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSSWSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLKRTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSLQRTEGGVLVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQLISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRITFPEKELLLLIRNHLISKGLGETASILTKEADLPMTAASHSSAFTPVAAAASPVALPRTPRIANGISARLGSHTSVGSAATSVHAQARPPASQGPLALPGPSYASNSPLIGRISFVRERPSPCNSRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDQYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDELLEERMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDSMNMDTVCRLYEVGRQRLAEDEEDEEEDQKDMEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENNENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDINCSIQ
SIO_010081: DCAF1
subclass of: SO_0000673
so part of: DCAF1
location: complement(join(1048690..1048709,1051310..1051565,1059483..1059491,1064079..1064183,1064756..1064829,1065631..1065735,1066244..1066337,1066838..1067071,1067989..1068073,1069290..1069372,1070058..1070256,1071037..1072297,1073749..1073873,1075526..1075695,1076567..1076776,1077736..1077915,1080342..1080500,1082281..1082382,1083585..1084085,1085092..1085229,1087643..1087756,1088591..1088664,1088975..1089051,1093411..1093520))
location: region:1048690-1093520:-1
so has part: feature:1093411-1093520:-1:exon
so has part: feature:1088975-1089051:-1:exon
so has part: feature:1088591-1088664:-1:exon
so has part: feature:1087643-1087756:-1:exon
so has part: feature:1085092-1085229:-1:exon
so has part: feature:1083585-1084085:-1:exon
so has part: feature:1082281-1082382:-1:exon
so has part: feature:1080342-1080500:-1:exon
so has part: feature:1077736-1077915:-1:exon
so has part: feature:1076567-1076776:-1:exon
so has part: feature:1075526-1075695:-1:exon
so has part: feature:1073749-1073873:-1:exon
so has part: feature:1071037-1072297:-1:exon
so has part: feature:1070058-1070256:-1:exon
so has part: feature:1069290-1069372:-1:exon
so has part: feature:1067989-1068073:-1:exon
so has part: feature:1066838-1067071:-1:exon
so has part: feature:1066244-1066337:-1:exon
so has part: feature:1065631-1065735:-1:exon
so has part: feature:1064756-1064829:-1:exon
so has part: feature:1064079-1064183:-1:exon
so has part: feature:1059483-1059491:-1:exon
so has part: feature:1051310-1051565:-1:exon
so has part: feature:1048690-1048709:-1:exon

XP_019475441.1
type: Protein
SIO_000068: ncbiprotein

position:1048690:-1
position: 1048690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093411-1093520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088975-1089051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088591-1088664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087643-1087756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085092-1085229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083585-1084085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082281-1082382:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080342-1080500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077736-1077915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076567-1076776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075526-1075695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073749-1073873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071037-1072297:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1070058-1070256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069290-1069372:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067989-1068073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066838-1067071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1066244-1066337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1065631-1065735:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064756-1064829:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064079-1064183:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1059483-1059491:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1051310-1051565:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1048690-1048709:-1:exon

DCAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DCAF1
product: DDB1 and CUL4 associated factor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019619899.2
SIO_010081: DCAF1
subclass of: SO_0000673
so part of: DCAF1
location: complement(join(1059519..1060219,1064079..1064183,1064756..1064829,1065631..1065735,1066244..1066337,1066838..1067071,1067989..1068073,1069290..1069372,1070058..1070256,1071037..1072297,1073749..1073873,1075526..1075695,1076567..1076776,1077736..1077915,1080342..1080500,1082281..1082382,1083585..1084085,1085092..1085229,1087643..1087756,1088591..1088664,1088975..1089051,1093411..1093550))
location: region:1059519-1093550:-1
so has part: feature:1093411-1093550:-1:exon
so has part: feature:1088975-1089051:-1:exon
so has part: feature:1088591-1088664:-1:exon
so has part: feature:1087643-1087756:-1:exon
so has part: feature:1085092-1085229:-1:exon
so has part: feature:1083585-1084085:-1:exon
so has part: feature:1082281-1082382:-1:exon
so has part: feature:1080342-1080500:-1:exon
so has part: feature:1077736-1077915:-1:exon
so has part: feature:1076567-1076776:-1:exon
so has part: feature:1075526-1075695:-1:exon
so has part: feature:1073749-1073873:-1:exon
so has part: feature:1071037-1072297:-1:exon
so has part: feature:1070058-1070256:-1:exon
so has part: feature:1069290-1069372:-1:exon
so has part: feature:1067989-1068073:-1:exon
so has part: feature:1066838-1067071:-1:exon
so has part: feature:1066244-1066337:-1:exon
so has part: feature:1065631-1065735:-1:exon
so has part: feature:1064756-1064829:-1:exon
so has part: feature:1064079-1064183:-1:exon
so has part: feature:1059519-1060219:-1:exon

position:1059519:-1
position: 1059519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093411-1093550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088975-1089051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088591-1088664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087643-1087756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085092-1085229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083585-1084085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082281-1082382:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080342-1080500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077736-1077915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076567-1076776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075526-1075695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073749-1073873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071037-1072297:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1070058-1070256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069290-1069372:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067989-1068073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066838-1067071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1066244-1066337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1065631-1065735:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064756-1064829:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064079-1064183:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1059519-1060219:-1:exon

position:1060219:-1
position: 1060219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DCAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DCAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DDB1- and CUL4-associated factor 1 isoform X5
translation: MTSGSGHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDRHPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLRELQVTEMTTKQENKRPSPRKVPSDSLLPLDEEAVDMDYGEMAVDGEQEVAGDMEISFHLDSSHKTSSRVSSSTKLDDVGLRKSKSGKQHERDGFRKAKQKLGFSASEPERMFVELSNSSWSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLKRTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSLQRTEGGVLVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQLISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRITFPEKELLLLIRNHLISKGLGETASILTKEADLPMTAASHSSAFTPVAAAASPVALPRTPRIANGISARLGSHTSVGSAATSVHAQARPPASQGPLALPGPSYASNSPLIGRISFVRERPSPCNSRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDQYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDELLEERMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDSMNMDTVCRLYEVGRQRLAEDEEDEEEDQN
SIO_010081: DCAF1
subclass of: SO_0000673
so part of: DCAF1
location: complement(join(1060214..1060219,1064079..1064183,1064756..1064829,1065631..1065735,1066244..1066337,1066838..1067071,1067989..1068073,1069290..1069372,1070058..1070256,1071037..1072297,1073749..1073873,1075526..1075695,1076567..1076776,1077736..1077915,1080342..1080500,1082281..1082382,1083585..1084085,1085092..1085229,1087643..1087756,1088591..1088664,1088975..1089051,1093411..1093520))
location: region:1060214-1093520:-1
so has part: feature:1093411-1093520:-1:exon
so has part: feature:1088975-1089051:-1:exon
so has part: feature:1088591-1088664:-1:exon
so has part: feature:1087643-1087756:-1:exon
so has part: feature:1085092-1085229:-1:exon
so has part: feature:1083585-1084085:-1:exon
so has part: feature:1082281-1082382:-1:exon
so has part: feature:1080342-1080500:-1:exon
so has part: feature:1077736-1077915:-1:exon
so has part: feature:1076567-1076776:-1:exon
so has part: feature:1075526-1075695:-1:exon
so has part: feature:1073749-1073873:-1:exon
so has part: feature:1071037-1072297:-1:exon
so has part: feature:1070058-1070256:-1:exon
so has part: feature:1069290-1069372:-1:exon
so has part: feature:1067989-1068073:-1:exon
so has part: feature:1066838-1067071:-1:exon
so has part: feature:1066244-1066337:-1:exon
so has part: feature:1065631-1065735:-1:exon
so has part: feature:1064756-1064829:-1:exon
so has part: feature:1064079-1064183:-1:exon
so has part: feature:1060214-1060219:-1:exon

XP_019475444.1
type: Protein
SIO_000068: ncbiprotein

position:1060214:-1
position: 1060214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1093411-1093520:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1088975-1089051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1088591-1088664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087643-1087756:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085092-1085229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1083585-1084085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1082281-1082382:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1080342-1080500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1077736-1077915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1076567-1076776:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1075526-1075695:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1073749-1073873:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1071037-1072297:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1070058-1070256:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1069290-1069372:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1067989-1068073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1066838-1067071:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1066244-1066337:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1065631-1065735:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1064756-1064829:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1064079-1064183:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1060214-1060219:-1:exon

MANF
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MANF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1098086..1100689
location: region:1098086-1100689:1
so has part: feature:1098086-1100689:1:exon
subclass of: SO_0000010

100545494
type: Gene
SIO_000068: ncbigene

position:1098086:1
position: 1098086
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1100689:1
position: 1100689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1098086-1100689:1:exon

MANF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MANF
product: mesencephalic astrocyte derived neurotrophic factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_019619950.1
SIO_010081: MANF
subclass of: SO_0000673
so part of: MANF
location: join(<1098086..1098221,1099032..1099159,1099581..1099722,1100499..1100689)
location: region:1098086-1100689:1
so has part: feature:1098086-1098221:1:exon
so has part: feature:1099032-1099159:1:exon
so has part: feature:1099581-1099722:1:exon
so has part: feature:1100499-1100689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1098086-1098221:1:exon

position:1098221:1
position: 1098221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1099032-1099159:1:exon

position:1099032:1
position: 1099032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099159:1
position: 1099159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1099581-1099722:1:exon

position:1099581:1
position: 1099581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099722:1
position: 1099722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1100499-1100689:1:exon

position:1100499:1
position: 1100499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MANF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MANF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mesencephalic astrocyte-derived neurotrophic factor
translation: PLSIGTRTHTEGQASGRAGNPWLLLQELVGHTPPAQVLPVLADHLLCVTFLGRFYQSLKDDNVEFTPASIEKELLKSCREAKGKENRLCYYIGATSDAATKIINEVSKPMSHHIPVEKICEKLKKKDSQICELKYDKQIDLSTADLRKLRVKELRRILDDWGEACKGCAEKSDFIRRIHELMPKYAPRAAGARADL
SIO_010081: MANF
subclass of: SO_0000673
so part of: MANF
location: join(<1098086..1098221,1099032..1099159,1099581..1099722,1100499..1100683)
location: region:1098086-1100683:1
so has part: feature:1098086-1098221:1:exon
so has part: feature:1099032-1099159:1:exon
so has part: feature:1099581-1099722:1:exon
so has part: feature:1100499-1100683:1:exon

XP_019475495.1
type: Protein
SIO_000068: ncbiprotein

position:1100683:1
position: 1100683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1098086-1098221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1099032-1099159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1099581-1099722:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1100499-1100683:1:exon

LOC104913108
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1100900..1114639
location: region:1100900-1114639:1
so has part: feature:1100900-1114639:1:exon
subclass of: SO_0000010

104913108
type: Gene
SIO_000068: ncbigene

position:1100900:1
position: 1100900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114639:1
position: 1114639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1100900-1114639:1:exon

LOC104913108
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913108
product: dedicator of cytokinesis protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_019619938.1
SIO_010081: LOC104913108
subclass of: SO_0000673
so part of: LOC104913108
location: join(1100900..1100983,1104422..1104522,1105383..1105470,1108886..1109008,1109604..1109686,1110162..1114639)
location: region:1100900-1114639:1
so has part: feature:1100900-1100983:1:exon
so has part: feature:1104422-1104522:1:exon
so has part: feature:1105383-1105470:1:exon
so has part: feature:1108886-1109008:1:exon
so has part: feature:1109604-1109686:1:exon
so has part: feature:1110162-1114639:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1100900-1100983:1:exon

position:1100983:1
position: 1100983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104422-1104522:1:exon

position:1104422:1
position: 1104422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104522:1
position: 1104522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1105383-1105470:1:exon

position:1105383:1
position: 1105383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105470:1
position: 1105470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1108886-1109008:1:exon

position:1108886:1
position: 1108886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109008:1
position: 1109008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1109604-1109686:1:exon

position:1109604:1
position: 1109604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109686:1
position: 1109686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1110162-1114639:1:exon

position:1110162:1
position: 1110162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913108
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913108
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 3-like
translation: MMLLPTHRDRPSSAMYPAAIMENGQPPNFQRALMQQMIGPCKPCSDPNLSVAEKAVPAAPSSWSLDSGTREALPFLSVHVGSILAPPVPPRRLPHGHYSLHFDAFHHQLSDAPPALPARTLRKSPLHPIPASPTSPQSGLDGSNSTLSGSASSGVSSLSESNFGHSSEPPPRTDTMDSVPSQAWNTDEDLETPYLPVRYSLSEPDVLESLKSQPCRSHSAPSGVIPQDTLDPPALPPKPYHSRLPNIENEEGMIIEDDDKHRQLHRKVSQPVSGGKEEQARVAWEHGISEQ
SIO_010081: LOC104913108
subclass of: SO_0000673
so part of: LOC104913108
location: join(1104448..1104522,1105383..1105470,1108886..1109008,1109604..1109686,1110162..1110668)
location: region:1104448-1110668:1
so has part: feature:1104448-1104522:1:exon
so has part: feature:1105383-1105470:1:exon
so has part: feature:1108886-1109008:1:exon
so has part: feature:1109604-1109686:1:exon
so has part: feature:1110162-1110668:1:exon

XP_019475483.1
type: Protein
SIO_000068: ncbiprotein

position:1104448:1
position: 1104448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110668:1
position: 1110668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104448-1104522:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1105383-1105470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1108886-1109008:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1109604-1109686:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1110162-1110668:1:exon

LOC104913109
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1117870..1130217
location: region:1117870-1130217:1
so has part: feature:1117870-1130217:1:exon
subclass of: SO_0000010

104913109
type: Gene
SIO_000068: ncbigene

position:1117870:1
position: 1117870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130217:1
position: 1130217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117870-1130217:1:exon

LOC104913109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913109
product: dedicator of cytokinesis protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019619958.2
SIO_010081: LOC104913109
subclass of: SO_0000673
so part of: LOC104913109
location: join(1117870..1118071,1121248..1121451,1122691..1122857,1123366..1123452,1123905..1124084,1125124..1125207,1126406..1126522,1127773..1127894,1129295..1129430,1129957..1130217)
location: region:1117870-1130217:1
so has part: feature:1117870-1118071:1:exon
so has part: feature:1121248-1121451:1:exon
so has part: feature:1122691-1122857:1:exon
so has part: feature:1123366-1123452:1:exon
so has part: feature:1123905-1124084:1:exon
so has part: feature:1125124-1125207:1:exon
so has part: feature:1126406-1126522:1:exon
so has part: feature:1127773-1127894:1:exon
so has part: feature:1129295-1129430:1:exon
so has part: feature:1129957-1130217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1117870-1118071:1:exon

position:1118071:1
position: 1118071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1121248-1121451:1:exon

position:1121248:1
position: 1121248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121451:1
position: 1121451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1122691-1122857:1:exon

position:1122691:1
position: 1122691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122857:1
position: 1122857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1123366-1123452:1:exon

position:1123366:1
position: 1123366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123452:1
position: 1123452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1123905-1124084:1:exon

position:1123905:1
position: 1123905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1124084:1
position: 1124084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1125124-1125207:1:exon

position:1125124:1
position: 1125124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125207:1
position: 1125207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1126406-1126522:1:exon

position:1126406:1
position: 1126406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1126522:1
position: 1126522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1127773-1127894:1:exon

position:1127773:1
position: 1127773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127894:1
position: 1127894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1129295-1129430:1:exon

position:1129295:1
position: 1129295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1129430:1
position: 1129430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1129957-1130217:1:exon

position:1129957:1
position: 1129957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 3-like
translation: MAPASRRHEALEGNFPLTKMAAQGGGETRRSPPPPISGRQLSRGGRGLANGRRRRGSWAGERANGGTEQPTAFNLTLREIHLCLSFLQNKEYVCRGHDYERLEAFQQRMLSEFPQAIAMQHPNHPDDSVLQCDAQYLQIYAVTPIPDNIDVLQMDRVPDRIKSFYRVNNIRKFRYDRPFHKGPKDKDNEFKSLWIERTTLTLTHSLPGISRWFEVERRELVEVSPLENAIQVVENKNQELRTLISQYQHKQMHGNINLLSMCLNGVIDAAVNGGIARYQEAFFDKDYITKHPGDAEKITQLKELMQEQVHVLGVGLAVHEKFVHPEMRPLHKKLIDQFQMMRSSLYHELPGLDKLSPACSGSSTPRSNVLVSHGPMSPESIKLLHRHSPLNLLGSVRHSSSSLSSHTSSETGNLVILTDSSVGEAAEEMYHMQASPSTSSLSSTHSAPSQMINSAPSSARGKNGWT
SIO_010081: LOC104913109
subclass of: SO_0000673
so part of: LOC104913109
location: join(1117870..1118071,1121248..1121451,1122691..1122857,1123366..1123452,1123905..1124084,1125124..1125207,1126406..1126522,1127773..1127894,1129295..1129430,1129957..1130058)
location: region:1117870-1130058:1
so has part: feature:1117870-1118071:1:exon
so has part: feature:1121248-1121451:1:exon
so has part: feature:1122691-1122857:1:exon
so has part: feature:1123366-1123452:1:exon
so has part: feature:1123905-1124084:1:exon
so has part: feature:1125124-1125207:1:exon
so has part: feature:1126406-1126522:1:exon
so has part: feature:1127773-1127894:1:exon
so has part: feature:1129295-1129430:1:exon
so has part: feature:1129957-1130058:1:exon

XP_019475503.1
type: Protein
SIO_000068: ncbiprotein

position:1130058:1
position: 1130058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1117870-1118071:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1121248-1121451:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1122691-1122857:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1123366-1123452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1123905-1124084:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1125124-1125207:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1126406-1126522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1127773-1127894:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1129295-1129430:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1129957-1130058:1:exon

LOC100545181
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100545181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1137024..1186103
location: region:1137024-1186103:1
so has part: feature:1137024-1186103:1:exon
subclass of: SO_0000010

100545181
type: Gene
SIO_000068: ncbigene

position:1137024:1
position: 1137024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1186103:1
position: 1186103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137024-1186103:1:exon

LOC100545181
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545181
product: dedicator of cytokinesis protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031555496.1
SIO_010081: LOC100545181
subclass of: SO_0000673
so part of: LOC100545181
location: join(1137024..1137188,1142407..1142569,1143110..1143216,1143923..1144094,1144734..1144831,1146483..1146566,1146827..1146927,1148404..1148485,1156078..1156248,1159987..1160179,1161444..1161571,1162537..1162641,1164610..1164708,1166026..1166120,1167472..1167547,1168660..1168760,1169168..1169226,1171380..1171528,1174042..1174127,1176272..1176298,1176419..1176514,1177559..1177619,1178062..1178155,1178815..1178963,1184101..1184187,1185822..1186103)
location: region:1137024-1186103:1
so has part: feature:1137024-1137188:1:exon
so has part: feature:1142407-1142569:1:exon
so has part: feature:1143110-1143216:1:exon
so has part: feature:1143923-1144094:1:exon
so has part: feature:1144734-1144831:1:exon
so has part: feature:1146483-1146566:1:exon
so has part: feature:1146827-1146927:1:exon
so has part: feature:1148404-1148485:1:exon
so has part: feature:1156078-1156248:1:exon
so has part: feature:1159987-1160179:1:exon
so has part: feature:1161444-1161571:1:exon
so has part: feature:1162537-1162641:1:exon
so has part: feature:1164610-1164708:1:exon
so has part: feature:1166026-1166120:1:exon
so has part: feature:1167472-1167547:1:exon
so has part: feature:1168660-1168760:1:exon
so has part: feature:1169168-1169226:1:exon
so has part: feature:1171380-1171528:1:exon
so has part: feature:1174042-1174127:1:exon
so has part: feature:1176272-1176298:1:exon
so has part: feature:1176419-1176514:1:exon
so has part: feature:1177559-1177619:1:exon
so has part: feature:1178062-1178155:1:exon
so has part: feature:1178815-1178963:1:exon
so has part: feature:1184101-1184187:1:exon
so has part: feature:1185822-1186103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1137024-1137188:1:exon

position:1137188:1
position: 1137188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1142407-1142569:1:exon

position:1142407:1
position: 1142407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142569:1
position: 1142569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1143110-1143216:1:exon

position:1143110:1
position: 1143110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143216:1
position: 1143216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1143923-1144094:1:exon

position:1143923:1
position: 1143923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144094:1
position: 1144094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1144734-1144831:1:exon

position:1144734:1
position: 1144734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144831:1
position: 1144831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1146483-1146566:1:exon

position:1146483:1
position: 1146483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146566:1
position: 1146566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1146827-1146927:1:exon

position:1146827:1
position: 1146827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146927:1
position: 1146927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1148404-1148485:1:exon

position:1148404:1
position: 1148404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148485:1
position: 1148485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1156078-1156248:1:exon

position:1156078:1
position: 1156078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1156248:1
position: 1156248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1159987-1160179:1:exon

position:1159987:1
position: 1159987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160179:1
position: 1160179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1161444-1161571:1:exon

position:1161444:1
position: 1161444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1161571:1
position: 1161571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1162537-1162641:1:exon

position:1162537:1
position: 1162537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1162641:1
position: 1162641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1164610-1164708:1:exon

position:1164610:1
position: 1164610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164708:1
position: 1164708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1166026-1166120:1:exon

position:1166026:1
position: 1166026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166120:1
position: 1166120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1167472-1167547:1:exon

position:1167472:1
position: 1167472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1167547:1
position: 1167547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1168660-1168760:1:exon

position:1168660:1
position: 1168660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168760:1
position: 1168760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1169168-1169226:1:exon

position:1169168:1
position: 1169168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1169226:1
position: 1169226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1171380-1171528:1:exon

position:1171380:1
position: 1171380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1171528:1
position: 1171528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1174042-1174127:1:exon

position:1174042:1
position: 1174042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174127:1
position: 1174127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1176272-1176298:1:exon

position:1176272:1
position: 1176272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176298:1
position: 1176298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1176419-1176514:1:exon

position:1176419:1
position: 1176419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1176514:1
position: 1176514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1177559-1177619:1:exon

position:1177559:1
position: 1177559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1177619:1
position: 1177619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1178062-1178155:1:exon

position:1178062:1
position: 1178062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178155:1
position: 1178155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1178815-1178963:1:exon

position:1178815:1
position: 1178815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1178963:1
position: 1178963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1184101-1184187:1:exon

position:1184101:1
position: 1184101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184187:1
position: 1184187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1185822-1186103:1:exon

position:1185822:1
position: 1185822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100545181
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545181
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 3
translation: MCLLSFPAGDIRNDLYLTLEKGDFERGGKSVQKNIEVTMYVLYADGEILKDCISLGSGEPSRSTYHSFVLYHNNSPRWGEIIKLPIPIDRFRGSHLRFEFRHCSTKDKGEKKLFGFAFTPLMRDDGTTLSDDIHELYVYKCDENSTFNNHALYLGLPCCKEDYNGCPNIPSSLIFQRSTKESFSVSTQLSSTKLTQNVDLLALLKWKAYPDRVMDILGRLRHVSGEEIVKFLQDILDTLFVVLDDNTEKYGLLVFQSLVFIINLLRDSKYFHFRPVMDTYIQKHFAGALAYKELIRCLKWYMDRSAELVRQDHIQEAMRALEYLFKFIVQSRILYSRATCGMEEEQFRSSIQELFQSIRFVLSLDSRSSETLIFTQAALLNSFPAIFDELLQMFTVQEVAEFVRGTLGSMPSTVHIGQSMDVVKLQSIARTVDSRLFSFSESRRILLPVVLHHIHLHLRQQKELLICSGILSSIFSIIKTSSLEGDVMEEVEMMVESLLDVLLQTLLTIMSKSQSQEAGEYVSCLLSLLRQMSDTHFQHLLDNFQSKDELKEFLLKIFCVFRNLMKMSVFPRDWMVMRLLTSNIIVTTVQYLSSALHKNFTETDFDFKVWNSYFSLAVLFINQPSLQLENATPAKRKKILDKYGDMRVMMAYELFSMWQNLGEHKIHFIPGMIGPFLGVTLVPQPEVRNIMIPIFHDMMDWEQRKNGNFKQVEAELIDKLDSLVSEGKGDENYRELFSLLTQLFGPYPSLLEKIEQETWRETGISFVTSVTRLMERLLDYRDCMKGDETENKKIGCTVNLMNFYKSEINKEEMYIRYIHKLCDMHLQAENYTEAAFTLLLYCELLQWEDRPLREFLHYPSQSEWQRKEGLCRKIIHYFNKGKSWEFGIPLCRELAMQYESLYDYQSLSWIRKMEATYYDNIMEQQRLEPEFFRVGFYGRKFPFFLRVSQSNKKCDSRTGLQVAVTALNCGCGDTTSAVHFIFYTCISRSSFLIGLKGMVGWEYS
SIO_010081: LOC100545181
subclass of: SO_0000673
so part of: LOC100545181
location: join(1137039..1137188,1142407..1142569,1143110..1143216,1143923..1144094,1144734..1144831,1146483..1146566,1146827..1146927,1148404..1148485,1156078..1156248,1159987..1160179,1161444..1161571,1162537..1162641,1164610..1164708,1166026..1166120,1167472..1167547,1168660..1168760,1169168..1169226,1171380..1171528,1174042..1174127,1176272..1176298,1176419..1176514,1177559..1177619,1178062..1178155,1178815..1178963,1184101..1184187,1185822..1186103)
location: region:1137039-1186103:1
so has part: feature:1137039-1137188:1:exon
so has part: feature:1142407-1142569:1:exon
so has part: feature:1143110-1143216:1:exon
so has part: feature:1143923-1144094:1:exon
so has part: feature:1144734-1144831:1:exon
so has part: feature:1146483-1146566:1:exon
so has part: feature:1146827-1146927:1:exon
so has part: feature:1148404-1148485:1:exon
so has part: feature:1156078-1156248:1:exon
so has part: feature:1159987-1160179:1:exon
so has part: feature:1161444-1161571:1:exon
so has part: feature:1162537-1162641:1:exon
so has part: feature:1164610-1164708:1:exon
so has part: feature:1166026-1166120:1:exon
so has part: feature:1167472-1167547:1:exon
so has part: feature:1168660-1168760:1:exon
so has part: feature:1169168-1169226:1:exon
so has part: feature:1171380-1171528:1:exon
so has part: feature:1174042-1174127:1:exon
so has part: feature:1176272-1176298:1:exon
so has part: feature:1176419-1176514:1:exon
so has part: feature:1177559-1177619:1:exon
so has part: feature:1178062-1178155:1:exon
so has part: feature:1178815-1178963:1:exon
so has part: feature:1184101-1184187:1:exon
so has part: feature:1185822-1186103:1:exon

XP_031411356.1
type: Protein
SIO_000068: ncbiprotein

position:1137039:1
position: 1137039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1137039-1137188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1142407-1142569:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1143110-1143216:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1143923-1144094:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1144734-1144831:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1146483-1146566:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1146827-1146927:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148404-1148485:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1156078-1156248:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1159987-1160179:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1161444-1161571:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1162537-1162641:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1164610-1164708:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1166026-1166120:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1167472-1167547:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1168660-1168760:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1169168-1169226:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1171380-1171528:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1174042-1174127:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1176272-1176298:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1176419-1176514:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1177559-1177619:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1178062-1178155:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1178815-1178963:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1184101-1184187:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1185822-1186103:1:exon

LOC109369872
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1228101..1238918
location: region:1228101-1238918:1
so has part: feature:1228101-1238918:1:exon
subclass of: SO_0000010

109369872
type: Gene
SIO_000068: ncbigene

position:1228101:1
position: 1228101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238918:1
position: 1238918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228101-1238918:1:exon

LOC109369872
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369872
product: dedicator of cytokinesis protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_031555485.1
SIO_010081: LOC109369872
subclass of: SO_0000673
so part of: LOC109369872
location: join(1228101..1228262,1235042..1235126,1237536..1237577,1238620..1238918)
location: region:1228101-1238918:1
so has part: feature:1228101-1228262:1:exon
so has part: feature:1235042-1235126:1:exon
so has part: feature:1237536-1237577:1:exon
so has part: feature:1238620-1238918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1228101-1228262:1:exon

position:1228262:1
position: 1228262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1235042-1235126:1:exon

position:1235042:1
position: 1235042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1235126:1
position: 1235126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1237536-1237577:1:exon

position:1237536:1
position: 1237536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1237577:1
position: 1237577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1238620-1238918:1:exon

position:1238620:1
position: 1238620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109369872
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369872
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dedicator of cytokinesis protein 3-like
translation: MPLQKHKVDLFYKLRHVMNELIDLRRQLLSGHLTQDQVREVKRHLTVRLDWGNEHLGLDLVPRKDFEVVDSDQISVSDLYKMHLSSRHSVQQSTSQVDTIRQRHGDACRMPVPHHFFLSLKSFTYNTIGEDTDVFFSLYDVREGKQIR
SIO_010081: LOC109369872
subclass of: SO_0000673
so part of: LOC109369872
location: join(1228102..1228262,1235042..1235126,1237536..1237577,1238620..1238778)
location: region:1228102-1238778:1
so has part: feature:1228102-1228262:1:exon
so has part: feature:1235042-1235126:1:exon
so has part: feature:1237536-1237577:1:exon
so has part: feature:1238620-1238778:1:exon

XP_031411345.1
type: Protein
SIO_000068: ncbiprotein

position:1228102:1
position: 1228102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238778:1
position: 1238778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1228102-1228262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1235042-1235126:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1237536-1237577:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1238620-1238778:1:exon

LOC100544877
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1290797..1299306
location: region:1290797-1299306:1
so has part: feature:1290797-1299306:1:exon
subclass of: SO_0000010

100544877
type: Gene
SIO_000068: ncbigene

position:1290797:1
position: 1290797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299306:1
position: 1299306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290797-1299306:1:exon

LOC100544877
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544877
product: MAP kinase-activated protein kinase 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 219 samples with support for all annotated introns
transcript id: XM_010718291.3
SIO_010081: LOC100544877
subclass of: SO_0000673
so part of: LOC100544877
location: join(1290797..1290955,1291120..1291244,1293210..1293295,1296010..1296090,1297566..1299306)
location: region:1290797-1299306:1
so has part: feature:1290797-1290955:1:exon
so has part: feature:1291120-1291244:1:exon
so has part: feature:1293210-1293295:1:exon
so has part: feature:1296010-1296090:1:exon
so has part: feature:1297566-1299306:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290797-1290955:1:exon

position:1290955:1
position: 1290955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1291120-1291244:1:exon

position:1291120:1
position: 1291120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1291244:1
position: 1291244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1293210-1293295:1:exon

position:1293210:1
position: 1293210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293295:1
position: 1293295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1296010-1296090:1:exon

position:1296010:1
position: 1296010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296090:1
position: 1296090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1297566-1299306:1:exon

position:1297566:1
position: 1297566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100544877
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544877
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP kinase-activated protein kinase 3
translation: MWSLGVITYILLCGFPPFYSNTGQAISPGMKRRIRMGQYGFPNPEWAEVSEEAKQLIRHLLKTDPTERMTISQFMNHPWINRSMAVPPTPLHTARVLQEDKDHWDEVKEEMTSALATMRVDYDQVKIKDLKTSNNRLLNKRRKKQKQSGTSSAAPGCNNQ
SIO_010081: LOC100544877
subclass of: SO_0000673
so part of: LOC100544877
location: join(1290924..1290955,1291120..1291244,1293210..1293295,1296010..1296090,1297566..1297724)
location: region:1290924-1297724:1
so has part: feature:1290924-1290955:1:exon
so has part: feature:1291120-1291244:1:exon
so has part: feature:1293210-1293295:1:exon
so has part: feature:1296010-1296090:1:exon
so has part: feature:1297566-1297724:1:exon

XP_010716593.1
type: Protein
SIO_000068: ncbiprotein

position:1290924:1
position: 1290924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1297724:1
position: 1297724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290924-1290955:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1291120-1291244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1293210-1293295:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1296010-1296090:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1297566-1297724:1:exon

LOC104913101
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1334075..1338413
location: region:1334075-1338413:1
so has part: feature:1334075-1338413:1:exon
subclass of: SO_0000010

104913101
type: Gene
SIO_000068: ncbigene

position:1334075:1
position: 1334075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338413:1
position: 1338413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1334075-1338413:1:exon

LOC104913101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913101
product: MAP kinase-activated protein kinase 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_010718292.1
SIO_010081: LOC104913101
subclass of: SO_0000673
so part of: LOC104913101
location: join(1334075..1334259,1335057..1335121,1337267..1337346,1338189..1338413)
location: region:1334075-1338413:1
so has part: feature:1334075-1334259:1:exon
so has part: feature:1335057-1335121:1:exon
so has part: feature:1337267-1337346:1:exon
so has part: feature:1338189-1338413:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1334075-1334259:1:exon

position:1334259:1
position: 1334259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1335057-1335121:1:exon

position:1335057:1
position: 1335057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335121:1
position: 1335121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1337267-1337346:1:exon

position:1337267:1
position: 1337267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337346:1
position: 1337346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1338189-1338413:1:exon

position:1338189:1
position: 1338189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MAP kinase-activated protein kinase 3-like
translation: MSLFSSVSLQLLYDNPKARLEVEYHWRASGCPHIVHILDVYENIHHGKRCLLIVMECMEGGELFSRIQERGDQAFTEREASEIMRDIGTAIQYLHSMNIAHRDVKPENLLYTSKEKDTVLKLTDFGFAKETTVQNALQTPCYTPYYVGESSKMHLFCVSHSSCYSGSVGCRNVW
SIO_010081: LOC104913101
subclass of: SO_0000673
so part of: LOC104913101
location: join(1334090..1334259,1335057..1335121,1337267..1337346,1338189..1338398)
location: region:1334090-1338398:1
so has part: feature:1334090-1334259:1:exon
so has part: feature:1335057-1335121:1:exon
so has part: feature:1337267-1337346:1:exon
so has part: feature:1338189-1338398:1:exon

XP_010716594.1
type: Protein
SIO_000068: ncbiprotein

position:1334090:1
position: 1334090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338398:1
position: 1338398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1334090-1334259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335057-1335121:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337267-1337346:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338189-1338398:1:exon

LOC104913110
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1339031..1367214
location: region:1339031-1367214:1
so has part: feature:1339031-1367214:1:exon
subclass of: SO_0000010

104913110
type: Gene
SIO_000068: ncbigene

position:1339031:1
position: 1339031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1367214:1
position: 1367214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339031-1367214:1:exon

LOC104913110
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913110
product: uncharacterized LOC104913110
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555498.1
SIO_010081: LOC104913110
subclass of: SO_0000673
so part of: LOC104913110
location: join(1339031..1339046,1339859..1340445,1365524..1367214)
location: region:1339031-1367214:1
so has part: feature:1339031-1339046:1:exon
so has part: feature:1339859-1340445:1:exon
so has part: feature:1365524-1367214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1339031-1339046:1:exon

position:1339046:1
position: 1339046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1339859-1340445:1:exon

position:1339859:1
position: 1339859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340445:1
position: 1340445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1365524-1367214:1:exon

position:1365524:1
position: 1365524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104913110
translation: MSLPIWRGAGWGEAAGGYRRETNIVSAGLRRGLWSELWHGRVLRRGRKFWAWAESCGAGAERSTSASPPLVESGGPRGAAGGSLTAVGADSRLCPGLDGERCVSGLSAPRDGAAGGRRGGHGLSPAMESDGGERESQPESHVESRSGVKPVPGGAAHVKLEIKKHAVTDDYKLSKRVLGLGINGKVLECFHKETGQKCALKEVICVGNQAIAGLEQEGRGG
SIO_010081: LOC104913110
subclass of: SO_0000673
so part of: LOC104913110
location: join(1339031..1339046,1339859..1340445,1365524..1365586)
location: region:1339031-1365586:1
so has part: feature:1339031-1339046:1:exon
so has part: feature:1339859-1340445:1:exon
so has part: feature:1365524-1365586:1:exon

XP_031411358.1
type: Protein
SIO_000068: ncbiprotein

position:1365586:1
position: 1365586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1339031-1339046:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1339859-1340445:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365524-1365586:1:exon

HEMK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1373772..1461548
location: region:1373772-1461548:1
so has part: feature:1373772-1461548:1:exon
subclass of: SO_0000010

100543482
type: Gene
SIO_000068: ncbigene

position:1373772:1
position: 1373772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1461548:1
position: 1461548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373772-1461548:1:exon

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_019619935.2
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373772..1374881,1375699..1375790,1376517..1376610,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1458606..1461548)
location: region:1373772-1461548:1
so has part: feature:1373772-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1458606-1461548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1373772-1374881:1:exon

position:1374881:1
position: 1374881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

position:1375699:1
position: 1375699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375790:1
position: 1375790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

position:1376517:1
position: 1376517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376610:1
position: 1376610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1393738-1393802:1:exon

position:1393738:1
position: 1393738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393802:1
position: 1393802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1398525-1398574:1:exon

position:1398525:1
position: 1398525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398574:1
position: 1398574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1399476-1399581:1:exon

position:1399476:1
position: 1399476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399581:1
position: 1399581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1400533-1400628:1:exon

position:1400533:1
position: 1400533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1400628:1
position: 1400628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1421108-1421178:1:exon

position:1421108:1
position: 1421108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421178:1
position: 1421178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1458606-1461548:1:exon

position:1458606:1
position: 1458606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_019619937.2
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373778..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1421108..1421178,1458606..1461548)
location: region:1373778-1461548:1
so has part: feature:1373778-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1458606-1461548:1:exon

position:1373778:1
position: 1373778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373778-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

position:1391547:1
position: 1391547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391696:1
position: 1391696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1458606-1461548:1:exon

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_031555484.1
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373778..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1421108..1421178,1437634..1437952)
location: region:1373778-1437952:1
so has part: feature:1373778-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1437634-1437952:1:exon

position:1437952:1
position: 1437952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373778-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1437634-1437952:1:exon

position:1437634:1
position: 1437634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019619927.2
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373779..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1458606..1458744,1459039..1461548)
location: region:1373779-1461548:1
so has part: feature:1373779-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1458606-1458744:1:exon
so has part: feature:1459039-1461548:1:exon

position:1373779:1
position: 1373779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373779-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1458606-1458744:1:exon

position:1458744:1
position: 1458744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1459039-1461548:1:exon

position:1459039:1
position: 1459039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_019619925.2
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373779..1374288,1374438..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1458606..1461548)
location: region:1373779-1461548:1
so has part: feature:1373779-1374288:1:exon
so has part: feature:1374438-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1458606-1461548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1373779-1374288:1:exon

position:1374288:1
position: 1374288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1374438-1374881:1:exon

position:1374438:1
position: 1374438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1458606-1461548:1:exon

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_019619928.2
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373779..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1437634..1437952)
location: region:1373779-1437952:1
so has part: feature:1373779-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1437634-1437952:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1373779-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1437634-1437952:1:exon

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_019619929.2
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373781..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1455446..1456501)
location: region:1373781-1456501:1
so has part: feature:1373781-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1455446-1456501:1:exon

position:1373781:1
position: 1373781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456501:1
position: 1456501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373781-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1455446-1456501:1:exon

position:1455446:1
position: 1455446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019619931.2
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373782..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1421596..1421834)
location: region:1373782-1421834:1
so has part: feature:1373782-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1421596-1421834:1:exon

position:1373782:1
position: 1373782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1421834:1
position: 1421834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373782-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1421596-1421834:1:exon

position:1421596:1
position: 1421596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_019619934.2
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373784..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1428681..1428768)
location: region:1373784-1428768:1
so has part: feature:1373784-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1428681-1428768:1:exon

position:1373784:1
position: 1373784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428768:1
position: 1428768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373784-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1428681-1428768:1:exon

position:1428681:1
position: 1428681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031555482.1
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373784..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1421647..1421834)
location: region:1373784-1421834:1
so has part: feature:1373784-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1421647-1421834:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1373784-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1421647-1421834:1:exon

position:1421647:1
position: 1421647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031555483.1
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373787..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1402789..1403170)
location: region:1373787-1403170:1
so has part: feature:1373787-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1402789-1403170:1:exon

position:1373787:1
position: 1373787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403170:1
position: 1403170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373787-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1402789-1403170:1:exon

position:1402789:1
position: 1402789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HEMK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEMK1
product: HemK methyltransferase family member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 210 samples with support for all annotated introns
transcript id: XM_010718293.3
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1373791..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1402327..1402440,1402789..1403170)
location: region:1373791-1403170:1
so has part: feature:1373791-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1402327-1402440:1:exon
so has part: feature:1402789-1403170:1:exon

position:1373791:1
position: 1373791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373791-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1402327-1402440:1:exon

position:1402327:1
position: 1402327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1402440:1
position: 1402440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1402789-1403170:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X2
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQDRIHILHHNVSYGSAKHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSLLKDSGGVKRAAVVGWPRQSHPGPVNFTRGQFLLYAEVMTAAWLMLQRQAHPPELLPLLTEQHVTQATQPLCVGAT
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1458606..1458744,1459039..1459042)
location: region:1374627-1459042:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1458606-1458744:1:exon
so has part: feature:1459039-1459042:1:exon

XP_019475472.1
type: Protein
SIO_000068: ncbiprotein

position:1374627:1
position: 1374627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1459042:1
position: 1459042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1458606-1458744:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1459039-1459042:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X1
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQDRIHILHHNVSYGSAKHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSLLKDSGGVKRAAVVGWPRQSHPGPVNFTRGQFLLYAEVMTAAWLMLQRQAHPPELLPLLTEQHVTQATQPLCVGAT
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1458606..1458748)
location: region:1374627-1458748:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1458606-1458748:1:exon

XP_019475470.1
type: Protein
SIO_000068: ncbiprotein

position:1458748:1
position: 1458748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1458606-1458748:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X11
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHSGVKRAAVVGWPRQSHPGPVNFTRGQFLLYAEVMTAAWLMLQRQAHPPELLPLLTEQHVTQATQPLCVGAT
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1421108..1421178,1458606..1458748)
location: region:1374627-1458748:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1458606-1458748:1:exon

XP_019475482.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1458606-1458748:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X9
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETESRVLAVDKEEAAVDLTRENVHRLQLQDRIHILHHNVSYGSAKHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSLLKDSGGVKRAAVVGWPRQSHPGPVNFTRGQFLLYAEVMTAAWLMLQRQAHPPELLPLLTEQHVTQATQPLCVGAT
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1458606..1458748)
location: region:1374627-1458748:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1458606-1458748:1:exon

XP_019475480.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1458606-1458748:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X5
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQDRIHILHHNVSYGSAKHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSLLKDSGGVKRAAVVGWPRQSHPGPVNFTREFLWEELFWRRWSLQRCWAQRKM
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1455446..1455516)
location: region:1374627-1455516:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1455446-1455516:1:exon

XP_019475474.1
type: Protein
SIO_000068: ncbiprotein

position:1455516:1
position: 1455516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1455446-1455516:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X3
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQDRIHILHHNVSYGSAKHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSLLKDSGGVKRAAVVGWPRQSHPGPVNFTREKMIPSPCSDGEEPGKDDFLQTQQSKGQKQPLQPLHPHSPSAY
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1437634..1437764)
location: region:1374627-1437764:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1437634-1437764:1:exon

XP_019475473.1
type: Protein
SIO_000068: ncbiprotein

position:1437764:1
position: 1437764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1437634-1437764:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X12
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHSGVKRAAVVGWPRQSHPGPVNFTREKMIPSPCSDGEEPGKDDFLQTQQSKGQKQPLQPLHPHSPSAY
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1421108..1421178,1437634..1437764)
location: region:1374627-1437764:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1437634-1437764:1:exon

XP_031411344.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1437634-1437764:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X7
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQDRIHILHHNVSYGSAKHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSLLKDSGGVKRAAVVGWPRQSHPGPVNFTREVH
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1428681..1428691)
location: region:1374627-1428691:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1428681-1428691:1:exon

XP_019475479.1
type: Protein
SIO_000068: ncbiprotein

position:1428691:1
position: 1428691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1428681-1428691:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X6
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQDRIHILHHNVSYGSAKHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSLLKDSGGVKRAAVVGWPRQSHPGPVNFTRVGLANMLPFKFFLVGMTVK
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1421596..1421654)
location: region:1374627-1421654:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1421596-1421654:1:exon

XP_019475476.1
type: Protein
SIO_000068: ncbiprotein

position:1421654:1
position: 1421654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1421596-1421654:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X8
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQDRIHILHHNVSYGSAKHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSLLKDSGGVKRAAVVGWPRQSHPGPVNFTRVK
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1421108..1421178,1421647..1421654)
location: region:1374627-1421654:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1421108-1421178:1:exon
so has part: feature:1421647-1421654:1:exon

XP_031411342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421108-1421178:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1421647-1421654:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X4
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQDRIHILHHNVSYGSAKHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSLLKDSGSVFLEVDPRHPDLVEDWLCAHPDLLLTLCAVHKDFCGKPRFLHIQKRSR
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1402327..1402440,1402789..1402825)
location: region:1374627-1402825:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1402327-1402440:1:exon
so has part: feature:1402789-1402825:1:exon

XP_010716595.1
type: Protein
SIO_000068: ncbiprotein

position:1402825:1
position: 1402825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1402327-1402440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1402789-1402825:1:exon

HEMK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEMK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: MTRF1L release factor glutamine methyltransferase isoform X10
translation: MRCLSSSLFRRFWGLLPQYVSVGPSQSPNLSPKQSSLRQSCSARPGLVTAPDVVSFWQKVFEKNGIPEARESSEYIVSFVLGAKTFQSLGSEKLCTPLTAVQQEQIQQLSCKRLERMPVQYVLGEWDFQDLNLKMRPPVFIPRPETEDLISLVVEEESWKCKAKNSAFLVAVPSPVILEIGCGSGAIALSLLCKIPQSRVLAVDKEEAAVDLTRENVHRLQLQDRIHILHHNVSYGSAKHLLPWGPVDFIVSNPPYVFHEDMASLDAEILRYEDLDALDGGDDGMRVIKIILTLAPSLLKDSGPRFLHIQKRSR
SIO_010081: HEMK1
subclass of: SO_0000673
so part of: HEMK1
location: join(1374627..1374881,1375699..1375790,1376517..1376610,1391547..1391696,1393738..1393802,1398525..1398574,1399476..1399581,1400533..1400628,1402789..1402825)
location: region:1374627-1402825:1
so has part: feature:1374627-1374881:1:exon
so has part: feature:1375699-1375790:1:exon
so has part: feature:1376517-1376610:1:exon
so has part: feature:1391547-1391696:1:exon
so has part: feature:1393738-1393802:1:exon
so has part: feature:1398525-1398574:1:exon
so has part: feature:1399476-1399581:1:exon
so has part: feature:1400533-1400628:1:exon
so has part: feature:1402789-1402825:1:exon

XP_031411343.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1374627-1374881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1375699-1375790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1376517-1376610:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1391547-1391696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1393738-1393802:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1398525-1398574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1399476-1399581:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1400533-1400628:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1402789-1402825:1:exon

CISH
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CISH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1460813..1466213)
location: region:1460813-1466213:-1
so has part: feature:1460813-1466213:-1:exon
subclass of: SO_0000010

100545029
type: Gene
SIO_000068: ncbigene

position:1460813:-1
position: 1460813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1466213:-1
position: 1466213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1460813-1466213:-1:exon

CISH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CISH
product: cytokine inducible SH2 containing protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 106 samples with support for all annotated introns
transcript id: XM_019619940.2
SIO_010081: CISH
subclass of: SO_0000673
so part of: CISH
location: complement(join(1460813..1463764,1463919..1464145,1465058..1466213))
location: region:1460813-1466213:-1
so has part: feature:1465058-1466213:-1:exon
so has part: feature:1463919-1464145:-1:exon
so has part: feature:1460813-1463764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1465058-1466213:-1:exon

position:1465058:-1
position: 1465058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1463919-1464145:-1:exon

position:1463919:-1
position: 1463919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1464145:-1
position: 1464145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1460813-1463764:-1:exon

position:1463764:-1
position: 1463764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CISH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CISH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine-inducible SH2-containing protein
translation: MQPLPVPAFPEEPAPTFAAPEPDGSAPQTRDPEEDLLCIAKTFSYLRESGWYWGSITASEAKQHLQKMPEGTFLVRDSTHPSYLFTLSVKTNRGPTNVRIEYADSKFRLDSNYLSKPRILAFPDVVSLIQHYVTSCTTESKSEAPYPPPAPLPPVQKEVAVAAVHLKLLRPLGRRDSIPSLQHLCRLRINRCTTKVERLPLPWRMGDYLKQYPFQL
SIO_010081: CISH
subclass of: SO_0000673
so part of: CISH
location: complement(join(1463262..1463764,1463919..1464066))
location: region:1463262-1464066:-1
so has part: feature:1463919-1464066:-1:exon
so has part: feature:1463262-1463764:-1:exon

XP_019475485.1
type: Protein
SIO_000068: ncbiprotein

position:1463262:-1
position: 1463262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1464066:-1
position: 1464066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1463919-1464066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463262-1463764:-1:exon

LOC104913102
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1483911..1507578
location: region:1483911-1507578:1
so has part: feature:1483911-1507578:1:exon
subclass of: SO_0000010

104913102
type: Gene
SIO_000068: ncbigene

position:1483911:1
position: 1483911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1507578:1
position: 1507578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483911-1507578:1:exon

LOC104913102
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: LOC104913102
product: high mobility group protein HMGI-C-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002119463.2
SIO_010081: LOC104913102
so part of: LOC104913102
location: join(1483911..1483974,1484140..1484281,1486564..1486661,1498692..1498903,1499418..1499504,1499915..1499962,1502842..1502929,1504924..1507578)
location: region:1483911-1507578:1
so has part: feature:1483911-1483974:1:exon
so has part: feature:1484140-1484281:1:exon
so has part: feature:1486564-1486661:1:exon
so has part: feature:1498692-1498903:1:exon
so has part: feature:1499418-1499504:1:exon
so has part: feature:1499915-1499962:1:exon
so has part: feature:1502842-1502929:1:exon
so has part: feature:1504924-1507578:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1483911-1483974:1:exon

position:1483974:1
position: 1483974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1484140-1484281:1:exon

position:1484140:1
position: 1484140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1484281:1
position: 1484281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1486564-1486661:1:exon

position:1486564:1
position: 1486564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1486661:1
position: 1486661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1498692-1498903:1:exon

position:1498692:1
position: 1498692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498903:1
position: 1498903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1499418-1499504:1:exon

position:1499418:1
position: 1499418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499504:1
position: 1499504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1499915-1499962:1:exon

position:1499915:1
position: 1499915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499962:1
position: 1499962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1502842-1502929:1:exon

position:1502842:1
position: 1502842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1502929:1
position: 1502929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1504924-1507578:1:exon

position:1504924:1
position: 1504924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913102
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: LOC104913102
product: high mobility group protein HMGI-C-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004161241.1
SIO_010081: LOC104913102
so part of: LOC104913102
location: join(1491874..1492005,1492138..1492554,1498692..1498903,1499418..1499504,1499915..1499962,1502842..1502929,1504924..1507578)
location: region:1491874-1507578:1
so has part: feature:1491874-1492005:1:exon
so has part: feature:1492138-1492554:1:exon
so has part: feature:1498692-1498903:1:exon
so has part: feature:1499418-1499504:1:exon
so has part: feature:1499915-1499962:1:exon
so has part: feature:1502842-1502929:1:exon
so has part: feature:1504924-1507578:1:exon

position:1491874:1
position: 1491874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491874-1492005:1:exon

position:1492005:1
position: 1492005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1492138-1492554:1:exon

position:1492138:1
position: 1492138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1492554:1
position: 1492554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1498692-1498903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499418-1499504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499915-1499962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1502842-1502929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1504924-1507578:1:exon

LOC104913102
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: LOC104913102
product: high mobility group protein HMGI-C-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002119462.2
SIO_010081: LOC104913102
so part of: LOC104913102
location: join(1491878..1492554,1494485..1494630,1498692..1498903,1499418..1499504,1499915..1499962,1502842..1502929,1504924..1507578)
location: region:1491878-1507578:1
so has part: feature:1491878-1492554:1:exon
so has part: feature:1494485-1494630:1:exon
so has part: feature:1498692-1498903:1:exon
so has part: feature:1499418-1499504:1:exon
so has part: feature:1499915-1499962:1:exon
so has part: feature:1502842-1502929:1:exon
so has part: feature:1504924-1507578:1:exon

position:1491878:1
position: 1491878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491878-1492554:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1494485-1494630:1:exon

position:1494485:1
position: 1494485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494630:1
position: 1494630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1498692-1498903:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499418-1499504:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1499915-1499962:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1502842-1502929:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1504924-1507578:1:exon

LOC104913102
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913102
product: high mobility group protein HMGI-C-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_019619948.2
SIO_010081: LOC104913102
subclass of: SO_0000673
so part of: LOC104913102
location: join(1491890..1492554,1498692..1498903,1499418..1499504,1499915..1499962,1502842..1502929,1504924..1507578)
location: region:1491890-1507578:1
so has part: feature:1491890-1492554:1:exon
so has part: feature:1498692-1498903:1:exon
so has part: feature:1499418-1499504:1:exon
so has part: feature:1499915-1499962:1:exon
so has part: feature:1502842-1502929:1:exon
so has part: feature:1504924-1507578:1:exon

position:1491890:1
position: 1491890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1491890-1492554:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1498692-1498903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499418-1499504:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1499915-1499962:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1502842-1502929:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1504924-1507578:1:exon

LOC104913102
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high mobility group protein HMGI-C-like
translation: MSSERSENSGPSPLSEGLKRKRGRPKKQPQEEAVGSLPEKKPRGRPKGSKKVSSVTGQTVEPPAGKRPRGRPRKWPQLVTQGASQEGGPQGSGDMDVNSAPATQGITGKEDFKPSKASAAQRSLSSIATAAQ
SIO_010081: LOC104913102
subclass of: SO_0000673
so part of: LOC104913102
location: join(1498814..1498903,1499418..1499504,1499915..1499962,1502842..1502929,1504924..1505009)
location: region:1498814-1505009:1
so has part: feature:1498814-1498903:1:exon
so has part: feature:1499418-1499504:1:exon
so has part: feature:1499915-1499962:1:exon
so has part: feature:1502842-1502929:1:exon
so has part: feature:1504924-1505009:1:exon

XP_019475493.1
type: Protein
SIO_000068: ncbiprotein

position:1498814:1
position: 1498814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1505009:1
position: 1505009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498814-1498903:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1499418-1499504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1499915-1499962:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502842-1502929:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1504924-1505009:1:exon

C14H3orf18
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: C14H3orf18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1509351..1518584)
location: region:1509351-1518584:-1
so has part: feature:1509351-1518584:-1:exon
subclass of: SO_0000010

100543324
type: Gene
SIO_000068: ncbigene

position:1509351:-1
position: 1509351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1518584:-1
position: 1518584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1509351-1518584:-1:exon

C14H3orf18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: C14H3orf18
product: chromosome 14 C3orf18 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019619946.2
SIO_010081: C14H3orf18
subclass of: SO_0000673
so part of: C14H3orf18
location: complement(join(1509351..1511147,1511982..1512040,1513467..1513596,1515198..1515223,1516573..1516973,1518041..1518584))
location: region:1509351-1518584:-1
so has part: feature:1518041-1518584:-1:exon
so has part: feature:1516573-1516973:-1:exon
so has part: feature:1515198-1515223:-1:exon
so has part: feature:1513467-1513596:-1:exon
so has part: feature:1511982-1512040:-1:exon
so has part: feature:1509351-1511147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1518041-1518584:-1:exon

position:1518041:-1
position: 1518041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1516573-1516973:-1:exon

position:1516573:-1
position: 1516573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1516973:-1
position: 1516973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1515198-1515223:-1:exon

position:1515198:-1
position: 1515198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1515223:-1
position: 1515223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1513467-1513596:-1:exon

position:1513467:-1
position: 1513467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513596:-1
position: 1513596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1511982-1512040:-1:exon

position:1511982:-1
position: 1511982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1512040:-1
position: 1512040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1509351-1511147:-1:exon

position:1511147:-1
position: 1511147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C14H3orf18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: C14H3orf18
product: chromosome 14 C3orf18 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_003209978.4
SIO_010081: C14H3orf18
subclass of: SO_0000673
so part of: C14H3orf18
location: complement(join(1509351..1511147,1513455..1513596,1515198..1515223,1516573..1516969,1518041..1518580))
location: region:1509351-1518580:-1
so has part: feature:1518041-1518580:-1:exon
so has part: feature:1516573-1516969:-1:exon
so has part: feature:1515198-1515223:-1:exon
so has part: feature:1513455-1513596:-1:exon
so has part: feature:1509351-1511147:-1:exon