Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 13, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 13, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015023.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015023.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000974.2.\nOn Dec 18, 2014 this sequence version replaced NC_015023.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19135657
topology: linear
so has quality: SO_0000987
location: 1..19135657
location: region:1-19135657:1
RO_0002162: 9103

NC_015023
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19135657:1
position: 19135657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19135657:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 13
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1149..1248
location: region:1149-1248:1
so has part: feature:1149-1248:1:region

position:1149:1
position: 1149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1248:1
position: 1248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1149-1248:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1830..1929
location: region:1830-1929:1
so has part: feature:1830-1929:1:region

position:1830:1
position: 1830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1929:1
position: 1929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1830-1929:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2686..2785
location: region:2686-2785:1
so has part: feature:2686-2785:1:region

position:2686:1
position: 2686
reference: sequence
type: ForwardStrandPosition
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position:2785:1
position: 2785
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:2686-2785:1:region

CCDC61
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8975..12563
location: region:8975-12563:1
so has part: feature:8975-12563:1:exon
subclass of: SO_0000010

100541618
type: Gene
SIO_000068: ncbigene

position:8975:1
position: 8975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12563:1
position: 12563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8975-12563:1:exon

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_019619713.2
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8975..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11794..11913,12012..12078)
location: region:8975-12078:1
so has part: feature:8975-9222:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11794-11913:1:exon
so has part: feature:12012-12078:1:exon

position:12078:1
position: 12078
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:8975-9222:1:exon

position:9222:1
position: 9222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9840-10037:1:exon

position:9840:1
position: 9840
reference: sequence
type: ForwardStrandPosition
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position:10037:1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:10109-10191:1:exon

position:10109:1
position: 10109
reference: sequence
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position:10191:1
position: 10191
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:10262-10416:1:exon

position:10262:1
position: 10262
reference: sequence
type: ForwardStrandPosition
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position:10416:1
position: 10416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10728-10832:1:exon

position:10728:1
position: 10728
reference: sequence
type: ForwardStrandPosition
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position:10832:1
position: 10832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10905-11001:1:exon

position:10905:1
position: 10905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11001:1
position: 11001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11074-11156:1:exon

position:11074:1
position: 11074
reference: sequence
type: ForwardStrandPosition
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position:11156:1
position: 11156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11245-11514:1:exon

position:11245:1
position: 11245
reference: sequence
type: ForwardStrandPosition
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position:11514:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11626-11696:1:exon

position:11626:1
position: 11626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11696:1
position: 11696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11794-11913:1:exon

position:11794:1
position: 11794
reference: sequence
type: ForwardStrandPosition
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position:11913:1
position: 11913
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:12012-12078:1:exon

position:12012:1
position: 12012
reference: sequence
type: ForwardStrandPosition
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CCDC61
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XR_004161159.1
SIO_010081: CCDC61
so part of: CCDC61
location: join(8976..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11794..11913,12015..12078,12178..12217)
location: region:8976-12217:1
so has part: feature:8976-9222:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11794-11913:1:exon
so has part: feature:12015-12078:1:exon
so has part: feature:12178-12217:1:exon

position:8976:1
position: 8976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12217:1
position: 12217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8976-9222:1:exon

urn:…
SIO_000300: 2
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SIO_000628: feature:10109-10191:1:exon

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SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:10728-10832:1:exon

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SIO_000300: 6
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11074-11156:1:exon

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SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11794-11913:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12015-12078:1:exon

position:12015:1
position: 12015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12178-12217:1:exon

position:12178:1
position: 12178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 66 samples with support for all annotated introns
transcript id: XM_031555423.1
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8976..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11794..12000)
location: region:8976-12000:1
so has part: feature:8976-9222:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11794-12000:1:exon

position:12000:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:8976-9222:1:exon

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SIO_000300: 2
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SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11794-12000:1:exon

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_019619706.2
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8977..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11775..11913,12012..12078,12178..12217,12308..12556)
location: region:8977-12556:1
so has part: feature:8977-9222:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11775-11913:1:exon
so has part: feature:12012-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12556:1:exon

position:8977:1
position: 8977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12556:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:8977-9222:1:exon

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SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11775-11913:1:exon

position:11775:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12012-12078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12308-12556:1:exon

position:12308:1
position: 12308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_019619707.2
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8977..9183,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11775..11913,12012..12078,12178..12217,12308..12556)
location: region:8977-12556:1
so has part: feature:8977-9183:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:8977-9183:1:exon

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reference: sequence
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urn:…
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SIO_000300: 6
SIO_000628: feature:10905-11001:1:exon

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SIO_000628: feature:11074-11156:1:exon

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SIO_000628: feature:11245-11514:1:exon

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SIO_000628: feature:11626-11696:1:exon

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SIO_000628: feature:11775-11913:1:exon

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SIO_000300: 11
SIO_000628: feature:12012-12078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12308-12556:1:exon

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_019619708.2
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8981..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11775..11913,12015..12078,12178..12217,12308..12556)
location: region:8981-12556:1
so has part: feature:8981-9222:1:exon
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so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11775-11913:1:exon
so has part: feature:12015-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12556:1:exon

position:8981:1
position: 8981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8981-9222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9840-10037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11775-11913:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12015-12078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12308-12556:1:exon

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_019619710.2
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8986..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,12178..12217,12308..12563)
location: region:8986-12563:1
so has part: feature:8986-9222:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12563:1:exon

position:8986:1
position: 8986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8986-9222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9840-10037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12308-12563:1:exon

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 147 samples with support for all annotated introns
transcript id: XM_010717714.3
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8986..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11841..11913,12012..12078,12178..12217,12308..12556)
location: region:8986-12556:1
so has part: feature:8986-9222:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11841-11913:1:exon
so has part: feature:12012-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12556:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8986-9222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9840-10037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11841-11913:1:exon

position:11841:1
position: 11841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12012-12078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12308-12556:1:exon

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_019619709.2
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8987..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11360,11436..11514,11626..11696,11775..11913,12012..12078,12178..12217,12308..12556)
location: region:8987-12556:1
so has part: feature:8987-9222:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11360:1:exon
so has part: feature:11436-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11775-11913:1:exon
so has part: feature:12012-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12556:1:exon

position:8987:1
position: 8987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8987-9222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9840-10037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11245-11360:1:exon

position:11360:1
position: 11360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11436-11514:1:exon

position:11436:1
position: 11436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11775-11913:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12012-12078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12308-12556:1:exon

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_010717716.3
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8988..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11841..11913,12015..12078,12178..12217,12308..12556)
location: region:8988-12556:1
so has part: feature:8988-9222:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11841-11913:1:exon
so has part: feature:12015-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12556:1:exon

position:8988:1
position: 8988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8988-9222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9840-10037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11841-11913:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12015-12078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12308-12556:1:exon

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 92 samples with support for all annotated introns
transcript id: XM_031555422.1
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8991..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11360,11436..11514,12178..12217,12308..12563)
location: region:8991-12563:1
so has part: feature:8991-9222:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11360:1:exon
so has part: feature:11436-11514:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12563:1:exon

position:8991:1
position: 8991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8991-9222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9840-10037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11245-11360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11436-11514:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12308-12563:1:exon

CCDC61
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CCDC61
product: coiled-coil domain containing 61, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 216 samples with support for all annotated introns
transcript id: XM_010717718.3
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(8994..9222,9840..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11360,11436..11514,11626..11696,11841..11913,12015..12078,12178..12217,12308..12556)
location: region:8994-12556:1
so has part: feature:8994-9222:1:exon
so has part: feature:9840-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11360:1:exon
so has part: feature:11436-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11841-11913:1:exon
so has part: feature:12015-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12556:1:exon

position:8994:1
position: 8994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8994-9222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9840-10037:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11245-11360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11436-11514:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11841-11913:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12015-12078:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12308-12556:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X7
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGEGHGDVGTFLGPPPNVLPPLPFPLGSRPPRFNPTAFVRAREQRRQEAELRRHLIWIGAANSRGKRTWAQSPQPHCLKSMPGFKHCRPTSAPWALTCEPPRGHQELSSEEPDPGIGVPRSHRCPGCVPTVPQREQRWQDVV
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,12178..12217,12308..12538)
location: region:9890-12538:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12538:1:exon

XP_019475255.1
type: Protein
SIO_000068: ncbiprotein

position:9890:1
position: 9890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12538:1
position: 12538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12308-12538:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X8
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGSRPPRFNPTAFVRAREQRRQEAELRRHLIWIGAANSRGKRTWAQSPQPHCLKSMPGFKHCRPTSAPWALTCEPPRGHQELSSEEPDPGIGVPRSHRCPGCVPTVPQREQRWQDVV
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11360,11436..11514,12178..12217,12308..12538)
location: region:9890-12538:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11360:1:exon
so has part: feature:11436-11514:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12538:1:exon

XP_031411282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11360:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11436-11514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12308-12538:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X1
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGEGHGDVGTFLGPPPNVLPPLPFPLGSRPPRFNPTAFVRAREQRRQEAELRRQKLPRGTVSNGDDCRRRCRHSSSVLGAPIRSGSALKASIKPCFAPAESFQSQRSALSSGSEADKCPQRRSRGLGGPSTRSPLSASSCNSSSVAPHLDRGRKQQGKENLGTEPSATLSEIDARLQALQAYISTLGTHM
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11775..11913,12012..12078,12178..12217,12308..12405)
location: region:9890-12405:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11775-11913:1:exon
so has part: feature:12012-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12405:1:exon

XP_019475251.1
type: Protein
SIO_000068: ncbiprotein

position:12405:1
position: 12405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11775-11913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12012-12078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12308-12405:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X1
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGEGHGDVGTFLGPPPNVLPPLPFPLGSRPPRFNPTAFVRAREQRRQEAELRRQKLPRGTVSNGDDCRRRCRHSSSVLGAPIRSGSALKASIKPCFAPAESFQSQRSALSSGSEADKCPQRRSRGLGGPSTRSPLSASSCNSSSVAPHLDRGRKQQGKENLGTEPSATLSEIDARLQALQAYISTLGTHM
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11775..11913,12012..12078,12178..12217,12308..12405)
location: region:9890-12405:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11775-11913:1:exon
so has part: feature:12012-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12405:1:exon

XP_019475252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11775-11913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12012-12078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12308-12405:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X2
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGEGHGDVGTFLGPPPNVLPPLPFPLGSRPPRFNPTAFVRAREQRRQEAELRRQKLPRGTVSNGDDCRRRCRHSSSVLGAPIRSGSALKASIKPCFAPAESFQSQRSALSSGSEADKCPQRRRGLGGPSTRSPLSASSCNSSSVAPHLDRGRKQQGKENLGTEPSATLSEIDARLQALQAYISTLGTHM
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11775..11913,12015..12078,12178..12217,12308..12405)
location: region:9890-12405:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11775-11913:1:exon
so has part: feature:12015-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12405:1:exon

XP_019475253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11775-11913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12015-12078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12308-12405:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X3
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGEGHGDVGTFLGPPPNVLPPLPFPLGSRPPRFNPTAFVRAREQRRQEAELRRQKLPRGTVSNGDDCRRRCRHSSSAESFQSQRSALSSGSEADKCPQRRSRGLGGPSTRSPLSASSCNSSSVAPHLDRGRKQQGKENLGTEPSATLSEIDARLQALQAYISTLGTHM
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11841..11913,12012..12078,12178..12217,12308..12405)
location: region:9890-12405:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11841-11913:1:exon
so has part: feature:12012-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12405:1:exon

XP_010716016.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11841-11913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12012-12078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12308-12405:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X4
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGEGHGDVGTFLGPPPNVLPPLPFPLGSRPPRFNPTAFVRAREQRRQEAELRRQKLPRGTVSNGDDCRRRCRHSSSAESFQSQRSALSSGSEADKCPQRRRGLGGPSTRSPLSASSCNSSSVAPHLDRGRKQQGKENLGTEPSATLSEIDARLQALQAYISTLGTHM
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11841..11913,12015..12078,12178..12217,12308..12405)
location: region:9890-12405:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11841-11913:1:exon
so has part: feature:12015-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12405:1:exon

XP_010716018.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11841-11913:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12015-12078:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12308-12405:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X5
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGSRPPRFNPTAFVRAREQRRQEAELRRQKLPRGTVSNGDDCRRRCRHSSSVLGAPIRSGSALKASIKPCFAPAESFQSQRSALSSGSEADKCPQRRSRGLGGPSTRSPLSASSCNSSSVAPHLDRGRKQQGKENLGTEPSATLSEIDARLQALQAYISTLGTHM
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11360,11436..11514,11626..11696,11775..11913,12012..12078,12178..12217,12308..12405)
location: region:9890-12405:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11360:1:exon
so has part: feature:11436-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11775-11913:1:exon
so has part: feature:12012-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12405:1:exon

XP_019475254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11360:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11436-11514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11775-11913:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12012-12078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12308-12405:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X6
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGSRPPRFNPTAFVRAREQRRQEAELRRQKLPRGTVSNGDDCRRRCRHSSSAESFQSQRSALSSGSEADKCPQRRRGLGGPSTRSPLSASSCNSSSVAPHLDRGRKQQGKENLGTEPSATLSEIDARLQALQAYISTLGTHM
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11360,11436..11514,11626..11696,11841..11913,12015..12078,12178..12217,12308..12405)
location: region:9890-12405:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11360:1:exon
so has part: feature:11436-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11841-11913:1:exon
so has part: feature:12015-12078:1:exon
so has part: feature:12178-12217:1:exon
so has part: feature:12308-12405:1:exon

XP_010716020.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11360:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11436-11514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11841-11913:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12015-12078:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12178-12217:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12308-12405:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X9
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGEGHGDVGTFLGPPPNVLPPLPFPLGSRPPRFNPTAFVRAREQRRQEAELRRQKLPRGTVSNGDDCRRRCRHSSSGLGLPSKLPSNPVSLQLKVSRASAQH
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11794..11873)
location: region:9890-11873:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11794-11873:1:exon

XP_019475258.1
type: Protein
SIO_000068: ncbiprotein

position:11873:1
position: 11873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11794-11873:1:exon

CCDC61
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CCDC61
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 61 isoform X9
translation: MEEPRCLQTNCFFRGKEHSVQLSVSQAVLEVEVEERRSTKLWRGRFDAASVEDLTRKTGNFKQFGIFCSMLEAALMKSSEAVSLELLTYGDLEALRCCKAGLATRVPPPTSPLSSKRYLILVYCVEFDRIHYPLPLPYFGEADVAVLRHLVQEQQDELAHLRDELRRAQQEVWRLEDERLRDKAWHQQEQQRMTKELAQVKAAEKMLQAHVNTLTAELAACRKGHSTSATAPGPPRYRHRSNSRDGRSSSQGRLPPRSPSPAGEGHGDVGTFLGPPPNVLPPLPFPLGSRPPRFNPTAFVRAREQRRQEAELRRQKLPRGTVSNGDDCRRRCRHSSSGLGLPSKLPSNPVSLQLKVSRASAQH
SIO_010081: CCDC61
subclass of: SO_0000673
so part of: CCDC61
location: join(9890..10037,10109..10191,10262..10416,10728..10832,10905..11001,11074..11156,11245..11514,11626..11696,11794..11873)
location: region:9890-11873:1
so has part: feature:9890-10037:1:exon
so has part: feature:10109-10191:1:exon
so has part: feature:10262-10416:1:exon
so has part: feature:10728-10832:1:exon
so has part: feature:10905-11001:1:exon
so has part: feature:11074-11156:1:exon
so has part: feature:11245-11514:1:exon
so has part: feature:11626-11696:1:exon
so has part: feature:11794-11873:1:exon

XP_031411283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10037:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10109-10191:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10262-10416:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10728-10832:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10905-11001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11074-11156:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11245-11514:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11626-11696:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11794-11873:1:exon

IMP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: IMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15784..20794
location: region:15784-20794:1
so has part: feature:15784-20794:1:exon
subclass of: SO_0000010

100541771
type: Gene
SIO_000068: ncbigene

position:15784:1
position: 15784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20794:1
position: 20794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15784-20794:1:exon

IMP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: IMP4
product: IMP U3 small nucleolar ribonucleoprotein 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 217 samples with support for all annotated introns
transcript id: XM_010717720.2
SIO_010081: IMP4
subclass of: SO_0000673
so part of: IMP4
location: join(15784..15822,16380..16488,17209..17292,18022..18131,18410..18542,18786..18940,19452..19546,19699..19769,20594..20794)
location: region:15784-20794:1
so has part: feature:15784-15822:1:exon
so has part: feature:16380-16488:1:exon
so has part: feature:17209-17292:1:exon
so has part: feature:18022-18131:1:exon
so has part: feature:18410-18542:1:exon
so has part: feature:18786-18940:1:exon
so has part: feature:19452-19546:1:exon
so has part: feature:19699-19769:1:exon
so has part: feature:20594-20794:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15784-15822:1:exon

position:15822:1
position: 15822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16380-16488:1:exon

position:16380:1
position: 16380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16488:1
position: 16488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:17209-17292:1:exon

position:17209:1
position: 17209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:17292:1
position: 17292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:18022-18131:1:exon

position:18022:1
position: 18022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18131:1
position: 18131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:18410-18542:1:exon

position:18410:1
position: 18410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18542:1
position: 18542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:18786-18940:1:exon

position:18786:1
position: 18786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:18940:1
position: 18940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:19452-19546:1:exon

position:19452:1
position: 19452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19546:1
position: 19546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:19699-19769:1:exon

position:19699:1
position: 19699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19769:1
position: 19769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:20594-20794:1:exon

position:20594:1
position: 20594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IMP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: IMP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U3 small nucleolar ribonucleoprotein protein IMP4
translation: MLRRQARERREYLQRRAQEERLRRQQDKKERLRQALDENRLLPTELRRQALALQKELEFETPGENGVTGSQDDEYRWAGLEPPKVMVTTSRDPSSRLRVFAKELCLVIPGARRLNRGRAEVGVLVSACRAAGVTDLLVLHETRGRPDGLVLCHLPHGPTAHFTLSGAVLRHEVGGLGGAPLGAPHILLHRLDSALGRRLGTILKHLFPVPRPQTRRVVTFANEDDVILVRNHVYRRQGKTVELEEVGPRFQLRPYLIRLGTLEQGDAADVEWRWHPYTATAPKRHLLSAT
SIO_010081: IMP4
subclass of: SO_0000673
so part of: IMP4
location: join(15820..15822,16380..16488,17209..17292,18022..18131,18410..18542,18786..18940,19452..19546,19699..19769,20594..20706)
location: region:15820-20706:1
so has part: feature:15820-15822:1:exon
so has part: feature:16380-16488:1:exon
so has part: feature:17209-17292:1:exon
so has part: feature:18022-18131:1:exon
so has part: feature:18410-18542:1:exon
so has part: feature:18786-18940:1:exon
so has part: feature:19452-19546:1:exon
so has part: feature:19699-19769:1:exon
so has part: feature:20594-20706:1:exon

XP_010716022.1
type: Protein
SIO_000068: ncbiprotein

position:15820:1
position: 15820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:20706:1
position: 20706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15820-15822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16380-16488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:17209-17292:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:18022-18131:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:18410-18542:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:18786-18940:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:19452-19546:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:19699-19769:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:20594-20706:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 24770..24869
location: region:24770-24869:1
so has part: feature:24770-24869:1:region

position:24770:1
position: 24770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24869:1
position: 24869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24770-24869:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 25366..25465
location: region:25366-25465:1
so has part: feature:25366-25465:1:region

position:25366:1
position: 25366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25465:1
position: 25465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25366-25465:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 31431..31530
location: region:31431-31530:1
so has part: feature:31431-31530:1:region

position:31431:1
position: 31431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31530:1
position: 31530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31431-31530:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 32262..32361
location: region:32262-32361:1
so has part: feature:32262-32361:1:region

position:32262:1
position: 32262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32361:1
position: 32361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32262-32361:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 33018..33117
location: region:33018-33117:1
so has part: feature:33018-33117:1:region

position:33018:1
position: 33018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33117:1
position: 33117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33018-33117:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 33627..33726
location: region:33627-33726:1
so has part: feature:33627-33726:1:region

position:33627:1
position: 33627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33726:1
position: 33726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33627-33726:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 34368..34467
location: region:34368-34467:1
so has part: feature:34368-34467:1:region

position:34368:1
position: 34368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34467:1
position: 34467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34368-34467:1:region

LOC104913002
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 46479..50632
location: region:46479-50632:1
so has part: feature:46479-50632:1:exon
subclass of: SO_0000010

104913002
type: Gene
SIO_000068: ncbigene

position:46479:1
position: 46479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50632:1
position: 50632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46479-50632:1:exon

LOC104913002
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913002
product: cadherin-8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_010717946.3
SIO_010081: LOC104913002
subclass of: SO_0000673
so part of: LOC104913002
location: join(46479..47362,48429..50632)
location: region:46479-50632:1
so has part: feature:46479-47362:1:exon
so has part: feature:48429-50632:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46479-47362:1:exon

position:47362:1
position: 47362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:48429-50632:1:exon

position:48429:1
position: 48429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913002
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-8-like
translation: MLCSEAMQIFPLSDNTLSVLAKHNGFSRQKQEVYLLPIIISDSGNPPMSSTSTLTIRVCGCSSDGIVQSCNVEAYVLPIGLSMGALIAILACIILLLVIVVLFVTLRRHKNEPLIIKDDEDVRENIIRYDDEGGGEEDTEAFDIATLQNPDGINGFLPRKDIKPDLQFMPRQGLAPVPNGVDVDEFINVRLHEADNDPTAPPYDSIQIYGYEGRGSAAGSLSSLESSASDSDQNFDYLSEWGPRFKRLGELYSVGESDKET
SIO_010081: LOC104913002
subclass of: SO_0000673
so part of: LOC104913002
location: join(47071..47362,48429..48922)
location: region:47071-48922:1
so has part: feature:47071-47362:1:exon
so has part: feature:48429-48922:1:exon

XP_010716248.2
type: Protein
SIO_000068: ncbiprotein

position:47071:1
position: 47071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:48922:1
position: 48922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47071-47362:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:48429-48922:1:exon

LOC100546462
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 70533..129077
location: region:70533-129077:1
so has part: feature:70533-129077:1:exon
subclass of: SO_0000010

100546462
type: Gene
SIO_000068: ncbigene

position:70533:1
position: 70533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129077:1
position: 129077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70533-129077:1:exon

LOC100546462
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546462
product: cadherin-8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555385.1
SIO_010081: LOC100546462
subclass of: SO_0000673
so part of: LOC100546462
location: join(70533..70556,90128..90245,101823..101990,105798..105985,108696..108949,112492..112628,128877..129077)
location: region:70533-129077:1
so has part: feature:70533-70556:1:exon
so has part: feature:90128-90245:1:exon
so has part: feature:101823-101990:1:exon
so has part: feature:105798-105985:1:exon
so has part: feature:108696-108949:1:exon
so has part: feature:112492-112628:1:exon
so has part: feature:128877-129077:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70533-70556:1:exon

position:70556:1
position: 70556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:90128-90245:1:exon

position:90128:1
position: 90128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90245:1
position: 90245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:101823-101990:1:exon

position:101823:1
position: 101823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:101990:1
position: 101990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105798-105985:1:exon

position:105798:1
position: 105798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:105985:1
position: 105985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:108696-108949:1:exon

position:108696:1
position: 108696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:108949:1
position: 108949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:112492-112628:1:exon

position:112492:1
position: 112492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:112628:1
position: 112628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:128877-129077:1:exon

position:128877:1
position: 128877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100546462
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546462
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-8-like
translation: MASEAILEVIQIVSAVDKDDPKNGHYFLYSLLPEMVNNPNFTIKKNEAIIKTALPNMDREAKEEYFVVIQAKDMGGHMGGLSGTTTVTITLTDVNDNPPKFAQSLYHFSVMEDVALGEPIGRVKANDLDIGENAKSSYDIIEGDGMDIFEITTDAQTQDGVIRVRKPLDFETKKSYTLKVEAANIHIDPRFISGGPFKDTATVKIVVEDADEPPVFSSPTYLLEVHENAAINSVIGQVTAHDPDVSSSPIRFSIDRHTDLERQFNINAEDGKITLATPLDRETNMWHNITIVATETRNHSQVSRVPVTIKVLDVNDNAPEFASEHEAFLCENGKPGQVNISMFFMLYNLEC
SIO_010081: LOC100546462
subclass of: SO_0000673
so part of: LOC100546462
location: join(70533..70556,90128..90245,101823..101990,105798..105985,108696..108949,112492..112628,128877..129043)
location: region:70533-129043:1
so has part: feature:70533-70556:1:exon
so has part: feature:90128-90245:1:exon
so has part: feature:101823-101990:1:exon
so has part: feature:105798-105985:1:exon
so has part: feature:108696-108949:1:exon
so has part: feature:112492-112628:1:exon
so has part: feature:128877-129043:1:exon

XP_031411245.1
type: Protein
SIO_000068: ncbiprotein

position:129043:1
position: 129043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70533-70556:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:90128-90245:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:101823-101990:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105798-105985:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:108696-108949:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:112492-112628:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:128877-129043:1:exon

LOC109369735
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369735
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 314698..324792
location: region:314698-324792:1
so has part: feature:314698-324792:1:exon
subclass of: SO_0000011

109369735
type: Gene
SIO_000068: ncbigene

position:314698:1
position: 314698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:324792:1
position: 324792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:314698-324792:1:exon

LOC109369735
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369735
product: uncharacterized LOC109369735
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004161160.1
SIO_010081: LOC109369735
subclass of: SO_0000673
so part of: LOC109369735
location: join(314698..314777,322379..322467,324728..324792)
location: region:314698-324792:1
so has part: feature:314698-314777:1:exon
so has part: feature:322379-322467:1:exon
so has part: feature:324728-324792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:314698-314777:1:exon

position:314777:1
position: 314777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322379-322467:1:exon

position:322379:1
position: 322379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322467:1
position: 322467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324728-324792:1:exon

position:324728:1
position: 324728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDH11
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CDH11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 813647..826573
location: region:813647-826573:1
so has part: feature:813647-826573:1:exon
subclass of: SO_0000010

100546309
type: Gene
SIO_000068: ncbigene

position:813647:1
position: 813647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:826573:1
position: 826573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813647-826573:1:exon

CDH11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CDH11
product: cadherin 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 173 samples with support for all annotated introns
transcript id: XM_010717721.2
SIO_010081: CDH11
subclass of: SO_0000673
so part of: CDH11
location: join(813647..813919,815194..815447,816426..816562,816777..816898,817672..817789,824020..824271,825271..826573)
location: region:813647-826573:1
so has part: feature:813647-813919:1:exon
so has part: feature:815194-815447:1:exon
so has part: feature:816426-816562:1:exon
so has part: feature:816777-816898:1:exon
so has part: feature:817672-817789:1:exon
so has part: feature:824020-824271:1:exon
so has part: feature:825271-826573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:813647-813919:1:exon

position:813919:1
position: 813919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:815194-815447:1:exon

position:815194:1
position: 815194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815447:1
position: 815447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:816426-816562:1:exon

position:816426:1
position: 816426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816562:1
position: 816562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:816777-816898:1:exon

position:816777:1
position: 816777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816898:1
position: 816898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:817672-817789:1:exon

position:817672:1
position: 817672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817789:1
position: 817789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:824020-824271:1:exon

position:824020:1
position: 824020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:824271:1
position: 824271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:825271-826573:1:exon

position:825271:1
position: 825271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDH11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CDH11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-11
translation: MSKIYNWKADFILEANACFYLPPGVYQMSVSEAAVPGEEVGRVKAKDPDIGENGLVAYSIIDGDGMDMFEITTDYETQEGVVKLKKVLDFETKKSYSLKVEAANVHIDPKFISNGPFKDTVTVKITVEDADEPPVFLKPSYIFEVQENAASGTVVGKVHAKDPDAANSAIRYSIDRHTDLERFFTINADDGNIKTIKALDREEIAWHNISVFAVEVHKQHQEAKVPVAIKVVDVNDNAPKFAAAYEAFVCENARTNQQFITISADDKDDSANGPRFIFSLPPEIIHNPNFTLRDNRDNTASVLVRREGFSRQKQDLYLLPIVISDGGLPPMSSTNTLTIRVCGCDSNGSLLSCNAEAYILNAGLSTGALIAILACIVILLVIVVLFVTLKRQKKEPLIVFEEEDVRENIITYDDEGGGEEDTEAFDIATLQNPDGINGFIPRKDIKPEYQYMPRPGLRPAPNSVDVDDFINTRIQEADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESATTDSDLDYDYLQNWGPRFKKLADLYGSKDTFDDDS
SIO_010081: CDH11
subclass of: SO_0000673
so part of: CDH11
location: join(813662..813919,815194..815447,816426..816562,816777..816898,817672..817789,824020..824271,825271..825767)
location: region:813662-825767:1
so has part: feature:813662-813919:1:exon
so has part: feature:815194-815447:1:exon
so has part: feature:816426-816562:1:exon
so has part: feature:816777-816898:1:exon
so has part: feature:817672-817789:1:exon
so has part: feature:824020-824271:1:exon
so has part: feature:825271-825767:1:exon

XP_010716023.1
type: Protein
SIO_000068: ncbiprotein

position:813662:1
position: 813662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:825767:1
position: 825767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813662-813919:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:815194-815447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816426-816562:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:816777-816898:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:817672-817789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:824020-824271:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:825271-825767:1:exon

LOC104912907
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 849628..855589
location: region:849628-855589:1
so has part: feature:849628-855589:1:exon
subclass of: SO_0000010

104912907
type: Gene
SIO_000068: ncbigene

position:849628:1
position: 849628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855589:1
position: 855589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849628-855589:1:exon

LOC104912907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912907
product: cadherin-11-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_010717722.3
SIO_010081: LOC104912907
subclass of: SO_0000673
so part of: LOC104912907
location: join(849628..849683,852197..852591,853759..854053,854794..854913,855395..855589)
location: region:849628-855589:1
so has part: feature:849628-849683:1:exon
so has part: feature:852197-852591:1:exon
so has part: feature:853759-854053:1:exon
so has part: feature:854794-854913:1:exon
so has part: feature:855395-855589:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:849628-849683:1:exon

position:849683:1
position: 849683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:852197-852591:1:exon

position:852197:1
position: 852197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:852591:1
position: 852591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:853759-854053:1:exon

position:853759:1
position: 853759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854053:1
position: 854053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:854794-854913:1:exon

position:854794:1
position: 854794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:854913:1
position: 854913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:855395-855589:1:exon

position:855395:1
position: 855395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912907
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912907
product: cadherin-11-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_010717723.3
SIO_010081: LOC104912907
subclass of: SO_0000673
so part of: LOC104912907
location: join(849689..849707,852197..852591,853759..854053,854794..854913,855395..855589)
location: region:849689-855589:1
so has part: feature:849689-849707:1:exon
so has part: feature:852197-852591:1:exon
so has part: feature:853759-854053:1:exon
so has part: feature:854794-854913:1:exon
so has part: feature:855395-855589:1:exon

position:849689:1
position: 849689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849689-849707:1:exon

position:849707:1
position: 849707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:852197-852591:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:853759-854053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:854794-854913:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:855395-855589:1:exon

LOC104912907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-11-like
translation: MKEDNCLHAALICLGMLYYSHAITTEKLNHVRPSLHGHHEKGKEGQVLHRSKRGWVWNQFFVIEEYTGPDPVLVGRLHSDIDSGDGNIKYILSGEGAGIIFVIDDKSGNIHATKTLDREERAQYTLTAQAVDRNTNRPLEPPSEFIVKVQDINDNPPEFLHENYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVNDNPPKFPQSK
SIO_010081: LOC104912907
subclass of: SO_0000673
so part of: LOC104912907
location: join(852364..852591,853759..854053,854794..854913,855395..855570)
location: region:852364-855570:1
so has part: feature:852364-852591:1:exon
so has part: feature:853759-854053:1:exon
so has part: feature:854794-854913:1:exon
so has part: feature:855395-855570:1:exon

XP_010716024.1
type: Protein
SIO_000068: ncbiprotein

position:852364:1
position: 852364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:855570:1
position: 855570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852364-852591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853759-854053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854794-854913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855395-855570:1:exon

LOC104912907
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-11-like
translation: MKEDNCLHAALICLGMLYYSHAITTEKLNHVRPSLHGHHEKGKEGQVLHRSKRGWVWNQFFVIEEYTGPDPVLVGRLHSDIDSGDGNIKYILSGEGAGIIFVIDDKSGNIHATKTLDREERAQYTLTAQAVDRNTNRPLEPPSEFIVKVQDINDNPPEFLHENYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDVNDNPPKFPQSK
SIO_010081: LOC104912907
subclass of: SO_0000673
so part of: LOC104912907
location: join(852364..852591,853759..854053,854794..854913,855395..855570)
location: region:852364-855570:1
so has part: feature:852364-852591:1:exon
so has part: feature:853759-854053:1:exon
so has part: feature:854794-854913:1:exon
so has part: feature:855395-855570:1:exon

XP_010716025.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:852364-852591:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:853759-854053:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:854794-854913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855395-855570:1:exon

LOC104912908
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912908
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 885158..897657
location: region:885158-897657:1
so has part: feature:885158-897657:1:exon
subclass of: SO_0000011

104912908
type: Gene
SIO_000068: ncbigene

position:885158:1
position: 885158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:897657:1
position: 897657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:885158-897657:1:exon

LOC104912908
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912908
product: uncharacterized LOC104912908
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XR_795003.3
SIO_010081: LOC104912908
subclass of: SO_0000673
so part of: LOC104912908
location: join(885158..885724,892583..892713,897556..897657)
location: region:885158-897657:1
so has part: feature:885158-885724:1:exon
so has part: feature:892583-892713:1:exon
so has part: feature:897556-897657:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:885158-885724:1:exon

position:885724:1
position: 885724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:892583-892713:1:exon

position:892583:1
position: 892583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892713:1
position: 892713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:897556-897657:1:exon

position:897556:1
position: 897556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109369742
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1197987..1206584)
location: region:1197987-1206584:-1
so has part: feature:1197987-1206584:-1:exon
subclass of: SO_0000011

109369742
type: Gene
SIO_000068: ncbigene

position:1197987:-1
position: 1197987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206584:-1
position: 1206584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1197987-1206584:-1:exon

LOC109369742
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369742
product: uncharacterized LOC109369742
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002119172.1
SIO_010081: LOC109369742
subclass of: SO_0000673
so part of: LOC109369742
location: complement(join(1197987..1198514,1202670..1202798,1202928..1203119,1206535..1206584))
location: region:1197987-1206584:-1
so has part: feature:1206535-1206584:-1:exon
so has part: feature:1202928-1203119:-1:exon
so has part: feature:1202670-1202798:-1:exon
so has part: feature:1197987-1198514:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1206535-1206584:-1:exon

position:1206535:-1
position: 1206535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1202928-1203119:-1:exon

position:1202928:-1
position: 1202928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203119:-1
position: 1203119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1202670-1202798:-1:exon

position:1202670:-1
position: 1202670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202798:-1
position: 1202798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1197987-1198514:-1:exon

position:1198514:-1
position: 1198514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CDH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1472478..1501001)
location: region:1472478-1501001:-1
so has part: feature:1472478-1501001:-1:exon
subclass of: SO_0000010

100544769
type: Gene
SIO_000068: ncbigene

position:1472478:-1
position: 1472478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1501001:-1
position: 1501001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472478-1501001:-1:exon

CDH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CDH5
product: cadherin 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 188 samples with support for all annotated introns
transcript id: XM_010717724.3
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(1472478..1475141,1475952..1476197,1476472..1476580,1477541..1477665,1478444..1478586,1479144..1479397,1480866..1481053,1481446..1481610,1482558..1482674,1482758..1483046,1485352..1485552,1500811..1501001))
location: region:1472478-1501001:-1
so has part: feature:1500811-1501001:-1:exon
so has part: feature:1485352-1485552:-1:exon
so has part: feature:1482758-1483046:-1:exon
so has part: feature:1482558-1482674:-1:exon
so has part: feature:1481446-1481610:-1:exon
so has part: feature:1480866-1481053:-1:exon
so has part: feature:1479144-1479397:-1:exon
so has part: feature:1478444-1478586:-1:exon
so has part: feature:1477541-1477665:-1:exon
so has part: feature:1476472-1476580:-1:exon
so has part: feature:1475952-1476197:-1:exon
so has part: feature:1472478-1475141:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1500811-1501001:-1:exon

position:1500811:-1
position: 1500811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1485352-1485552:-1:exon

position:1485352:-1
position: 1485352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485552:-1
position: 1485552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1482758-1483046:-1:exon

position:1482758:-1
position: 1482758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483046:-1
position: 1483046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1482558-1482674:-1:exon

position:1482558:-1
position: 1482558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482674:-1
position: 1482674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1481446-1481610:-1:exon

position:1481446:-1
position: 1481446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481610:-1
position: 1481610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1480866-1481053:-1:exon

position:1480866:-1
position: 1480866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1481053:-1
position: 1481053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1479144-1479397:-1:exon

position:1479144:-1
position: 1479144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1479397:-1
position: 1479397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1478444-1478586:-1:exon

position:1478444:-1
position: 1478444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1478586:-1
position: 1478586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1477541-1477665:-1:exon

position:1477541:-1
position: 1477541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477665:-1
position: 1477665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1476472-1476580:-1:exon

position:1476472:-1
position: 1476472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476580:-1
position: 1476580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1475952-1476197:-1:exon

position:1475952:-1
position: 1475952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1476197:-1
position: 1476197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1472478-1475141:-1:exon

position:1475141:-1
position: 1475141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CDH5
product: cadherin 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 54 samples with support for all annotated introns
transcript id: XM_003209822.4
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(1472478..1475141,1475952..1476197,1476472..1476580,1477541..1477665,1478444..1478586,1479144..1479397,1480866..1481053,1481446..1481610,1482558..1482674,1482758..1483046,1485352..1485552,1490398..1490491))
location: region:1472478-1490491:-1
so has part: feature:1490398-1490491:-1:exon
so has part: feature:1485352-1485552:-1:exon
so has part: feature:1482758-1483046:-1:exon
so has part: feature:1482558-1482674:-1:exon
so has part: feature:1481446-1481610:-1:exon
so has part: feature:1480866-1481053:-1:exon
so has part: feature:1479144-1479397:-1:exon
so has part: feature:1478444-1478586:-1:exon
so has part: feature:1477541-1477665:-1:exon
so has part: feature:1476472-1476580:-1:exon
so has part: feature:1475952-1476197:-1:exon
so has part: feature:1472478-1475141:-1:exon

position:1490491:-1
position: 1490491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1490398-1490491:-1:exon

position:1490398:-1
position: 1490398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1485352-1485552:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482758-1483046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1482558-1482674:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1481446-1481610:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1480866-1481053:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1479144-1479397:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1478444-1478586:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1477541-1477665:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1476472-1476580:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1475952-1476197:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1472478-1475141:-1:exon

CDH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CDH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-5
translation: MKKLILLFSLFLAPAFSYKENQKTKQNFSSNNTSHKRLKRDWIWNRMHIREEIDSPLPHHVGKLTSSVGNKNAMYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKVFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGTEYFTVDDSGVISTARADLDRENQSTYEIIVKAKDALGLTGESSTATVIIRLTDINDNFPVFKHPSFHFKVPENVSVGGEVGRVEVEDIDEPQHRHTKYSFVRGDYRDTFEIVANPFTNEGIIRPKKPLDFEKVAEYRFDIEATDHNVNPAYYKPGGSKSISTITIEVTDIDEPPVFTKLPYEFKVRENDPEIKTLGSVWAYDPDAAKRKIRFVRRKASPNGDYVRVSDTGIIQLPKPLDREFSSSYNITVAAQEILEDGRLSDRESHAQVHVIVIDENDNAPELVYPEEPRVCENAAPGKVIIRISATDKDEISPRGFFRYSLTTEDSNFSLIENYDNTANITVKYGQFNRELAKIHYLPVIISDNGDPDLSSTNTLVISVCKCNEKGDFTFCEERAKQVGVSIQALVAIFICIFTIIVIAMLILLRKRHKKDLSGLRRNVAEIHEQLVTYDEEGGGEMDTTSYDVSVLNSVRKNGIKPEVVPSAYAQVQKPPGNTTSGAGEMEMMIEVKKDEADNDRDLLPYDTLHIYGYEGAESIAESLSSLESGSSDSDIDYDFLNDWGPRFKMLAELYGSEPNEDFVY
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(1474648..1475141,1475952..1476197,1476472..1476580,1477541..1477665,1478444..1478586,1479144..1479397,1480866..1481053,1481446..1481610,1482558..1482674,1482758..1483046,1485352..1485540))
location: region:1474648-1485540:-1
so has part: feature:1485352-1485540:-1:exon
so has part: feature:1482758-1483046:-1:exon
so has part: feature:1482558-1482674:-1:exon
so has part: feature:1481446-1481610:-1:exon
so has part: feature:1480866-1481053:-1:exon
so has part: feature:1479144-1479397:-1:exon
so has part: feature:1478444-1478586:-1:exon
so has part: feature:1477541-1477665:-1:exon
so has part: feature:1476472-1476580:-1:exon
so has part: feature:1475952-1476197:-1:exon
so has part: feature:1474648-1475141:-1:exon

XP_003209870.1
type: Protein
SIO_000068: ncbiprotein

position:1474648:-1
position: 1474648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485540:-1
position: 1485540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1485352-1485540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1482758-1483046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482558-1482674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1481446-1481610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1480866-1481053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1479144-1479397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478444-1478586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477541-1477665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1476472-1476580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1475952-1476197:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1474648-1475141:-1:exon

CDH5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CDH5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-5
translation: MKKLILLFSLFLAPAFSYKENQKTKQNFSSNNTSHKRLKRDWIWNRMHIREEIDSPLPHHVGKLTSSVGNKNAMYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKVFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGTEYFTVDDSGVISTARADLDRENQSTYEIIVKAKDALGLTGESSTATVIIRLTDINDNFPVFKHPSFHFKVPENVSVGGEVGRVEVEDIDEPQHRHTKYSFVRGDYRDTFEIVANPFTNEGIIRPKKPLDFEKVAEYRFDIEATDHNVNPAYYKPGGSKSISTITIEVTDIDEPPVFTKLPYEFKVRENDPEIKTLGSVWAYDPDAAKRKIRFVRRKASPNGDYVRVSDTGIIQLPKPLDREFSSSYNITVAAQEILEDGRLSDRESHAQVHVIVIDENDNAPELVYPEEPRVCENAAPGKVIIRISATDKDEISPRGFFRYSLTTEDSNFSLIENYDNTANITVKYGQFNRELAKIHYLPVIISDNGDPDLSSTNTLVISVCKCNEKGDFTFCEERAKQVGVSIQALVAIFICIFTIIVIAMLILLRKRHKKDLSGLRRNVAEIHEQLVTYDEEGGGEMDTTSYDVSVLNSVRKNGIKPEVVPSAYAQVQKPPGNTTSGAGEMEMMIEVKKDEADNDRDLLPYDTLHIYGYEGAESIAESLSSLESGSSDSDIDYDFLNDWGPRFKMLAELYGSEPNEDFVY
SIO_010081: CDH5
subclass of: SO_0000673
so part of: CDH5
location: complement(join(1474648..1475141,1475952..1476197,1476472..1476580,1477541..1477665,1478444..1478586,1479144..1479397,1480866..1481053,1481446..1481610,1482558..1482674,1482758..1483046,1485352..1485540))
location: region:1474648-1485540:-1
so has part: feature:1485352-1485540:-1:exon
so has part: feature:1482758-1483046:-1:exon
so has part: feature:1482558-1482674:-1:exon
so has part: feature:1481446-1481610:-1:exon
so has part: feature:1480866-1481053:-1:exon
so has part: feature:1479144-1479397:-1:exon
so has part: feature:1478444-1478586:-1:exon
so has part: feature:1477541-1477665:-1:exon
so has part: feature:1476472-1476580:-1:exon
so has part: feature:1475952-1476197:-1:exon
so has part: feature:1474648-1475141:-1:exon

XP_010716026.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1485352-1485540:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1482758-1483046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1482558-1482674:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1481446-1481610:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1480866-1481053:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1479144-1479397:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1478444-1478586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1477541-1477665:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1476472-1476580:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1475952-1476197:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1474648-1475141:-1:exon

LOC100544614
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1553764..1565237)
location: region:1553764-1565237:-1
so has part: feature:1553764-1565237:-1:exon
subclass of: SO_0000010

100544614
type: Gene
SIO_000068: ncbigene

position:1553764:-1
position: 1553764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565237:-1
position: 1565237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1553764-1565237:-1:exon

LOC100544614
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544614
product: protein BEAN1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019619661.2
SIO_010081: LOC100544614
subclass of: SO_0000673
so part of: LOC100544614
location: complement(join(1553764..1555020,1560319..1560460,1562349..1562558,1565150..1565237))
location: region:1553764-1565237:-1
so has part: feature:1565150-1565237:-1:exon
so has part: feature:1562349-1562558:-1:exon
so has part: feature:1560319-1560460:-1:exon
so has part: feature:1553764-1555020:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1565150-1565237:-1:exon

position:1565150:-1
position: 1565150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1562349-1562558:-1:exon

position:1562349:-1
position: 1562349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1562558:-1
position: 1562558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1560319-1560460:-1:exon

position:1560319:-1
position: 1560319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560460:-1
position: 1560460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1553764-1555020:-1:exon

position:1555020:-1
position: 1555020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100544614
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544614
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BEAN1-like
translation: MHEHSNFHQSKKSQEAKLQRHKQSFKEPREVHLNQSSPTSELPSYSENGSDASLLVSPLLVAGVVIGLVLFLSCVTIIVGSLRKDGRLRHPHQRRDTAYAPDGFSYGGSFGELRSTCMEEFPPAFDFGSYLDTLSQVNIMYPDSPPRSQLHSA
SIO_010081: LOC100544614
subclass of: SO_0000673
so part of: LOC100544614
location: complement(join(1554999..1555020,1560319..1560460,1562349..1562558,1565150..1565237))
location: region:1554999-1565237:-1
so has part: feature:1565150-1565237:-1:exon
so has part: feature:1562349-1562558:-1:exon
so has part: feature:1560319-1560460:-1:exon
so has part: feature:1554999-1555020:-1:exon

XP_019475206.1
type: Protein
SIO_000068: ncbiprotein

position:1554999:-1
position: 1554999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565150-1565237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1562349-1562558:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1560319-1560460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1554999-1555020:-1:exon

TK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1570507..1577637
location: region:1570507-1577637:1
so has part: feature:1570507-1577637:1:exon
subclass of: SO_0000010

100546154
type: Gene
SIO_000068: ncbigene

position:1570507:1
position: 1570507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1577637:1
position: 1577637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1570507-1577637:1:exon

TK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TK2
product: thymidine kinase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010717726.3
SIO_010081: TK2
subclass of: SO_0000673
so part of: TK2
location: join(1570507..1570612,1573519..1573607,1573952..1574031,1574532..1574612,1574995..1577637)
location: region:1570507-1577637:1
so has part: feature:1570507-1570612:1:exon
so has part: feature:1573519-1573607:1:exon
so has part: feature:1573952-1574031:1:exon
so has part: feature:1574532-1574612:1:exon
so has part: feature:1574995-1577637:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1570507-1570612:1:exon

position:1570612:1
position: 1570612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1573519-1573607:1:exon

position:1573519:1
position: 1573519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573607:1
position: 1573607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1573952-1574031:1:exon

position:1573952:1
position: 1573952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574031:1
position: 1574031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1574532-1574612:1:exon

position:1574532:1
position: 1574532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574612:1
position: 1574612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1574995-1577637:1:exon

position:1574995:1
position: 1574995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thymidine kinase 2, mitochondrial
translation: MMERSIHSAKYIFVENLYRSGKMPEVDYVVLSEWFDWIQNNTDVSVDLIVYLQTSPKVCYERLKRRCREEEKIIPLEYLEAIHQLYEEWLIKHTLFKVSCPVLVIGADHDMQKMIEKYEENRDQILSPCNMQQHL
SIO_010081: TK2
subclass of: SO_0000673
so part of: TK2
location: join(1570554..1570612,1573519..1573607,1573952..1574031,1574532..1574612,1574995..1575093)
location: region:1570554-1575093:1
so has part: feature:1570554-1570612:1:exon
so has part: feature:1573519-1573607:1:exon
so has part: feature:1573952-1574031:1:exon
so has part: feature:1574532-1574612:1:exon
so has part: feature:1574995-1575093:1:exon

XP_010716028.2
type: Protein
SIO_000068: ncbiprotein

position:1570554:1
position: 1570554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575093:1
position: 1575093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1570554-1570612:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1573519-1573607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1573952-1574031:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1574532-1574612:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1574995-1575093:1:exon

LOC104913003
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1580065..1583848)
location: region:1580065-1583848:-1
so has part: feature:1580065-1583848:-1:exon
subclass of: SO_0000010

104913003
type: Gene
SIO_000068: ncbigene

position:1580065:-1
position: 1580065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583848:-1
position: 1583848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580065-1583848:-1:exon

LOC104913003
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913003
product: uncharacterized LOC104913003
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555386.1
SIO_010081: LOC104913003
subclass of: SO_0000673
so part of: LOC104913003
location: complement(join(1580065..1582519,1583473..1583593,1583835..1583848))
location: region:1580065-1583848:-1
so has part: feature:1583835-1583848:-1:exon
so has part: feature:1583473-1583593:-1:exon
so has part: feature:1580065-1582519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1583835-1583848:-1:exon

position:1583835:-1
position: 1583835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1583473-1583593:-1:exon

position:1583473:-1
position: 1583473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583593:-1
position: 1583593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1580065-1582519:-1:exon

position:1582519:-1
position: 1582519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913003
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913003
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104913003
translation: MVSCMARGRRGGSVLRDLLKALEVLELLCINLLLSPWRKEIRSLKTFTGNFVYYVQSVLPDDIVKTVLEKIGYIATTATEFSLVRKRNNEETKQTAFEIFLARIECETILEMTNEEKHGNLETLQKRSQMHWHHKNKDREDQTPQKEDCENLENKENSETSLCLATQQKSSASSNVSFETTRDLKTPHLAVAQATNRLQEHQKQVINTVHFPGKCSDSEDFLIKYSDIVIRQTPIFSENLSPEAFEKKPRASLSEECVLAATAQSTANELWSVPLSPGASGPPAFAIFADSTCGSKSSSEYEAEQVAEESIEAKINDAINCVDPDPADKPNELKSLPYTDVTSVQNCPVPREEEVCDLSLTFTKLQVKDTQEDLMYPIEETGHPESLSYASDRNVRELNHSKMKSTYSINAEMQNRAAAFIEPAPDLCCTTGSVEDPTGGSDGKGLLTGTPNARRASECFRHIREPPNPTYIPPRSIDVRSPSRRSTSTQGRRNLLQPDSESSEVKPENYNLKVNEIQEPYVIIDKTDQGMLC
SIO_010081: LOC104913003
subclass of: SO_0000673
so part of: LOC104913003
location: complement(join(1581053..1582519,1583473..1583593,1583835..1583848))
location: region:1581053-1583848:-1
so has part: feature:1583835-1583848:-1:exon
so has part: feature:1583473-1583593:-1:exon
so has part: feature:1581053-1582519:-1:exon

XP_031411246.1
type: Protein
SIO_000068: ncbiprotein

position:1581053:-1
position: 1581053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1583835-1583848:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1583473-1583593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1581053-1582519:-1:exon

LOC104912911
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912911
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1584502..1586085
location: region:1584502-1586085:1
so has part: feature:1584502-1586085:1:exon
subclass of: SO_0000011

104912911
type: Gene
SIO_000068: ncbigene

position:1584502:1
position: 1584502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1586085:1
position: 1586085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1584502-1586085:1:exon

LOC104912911
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912911
product: uncharacterized LOC104912911
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XR_795005.3
SIO_010081: LOC104912911
subclass of: SO_0000673
so part of: LOC104912911
location: join(1584502..1584627,1584813..1584887,1586032..1586085)
location: region:1584502-1586085:1
so has part: feature:1584502-1584627:1:exon
so has part: feature:1584813-1584887:1:exon
so has part: feature:1586032-1586085:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1584502-1584627:1:exon

position:1584627:1
position: 1584627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1584813-1584887:1:exon

position:1584813:1
position: 1584813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1584887:1
position: 1584887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1586032-1586085:1:exon

position:1586032:1
position: 1586032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104913004
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1588099..1590572)
location: region:1588099-1590572:-1
so has part: feature:1588099-1590572:-1:exon
subclass of: SO_0000010

104913004
type: Gene
SIO_000068: ncbigene

position:1588099:-1
position: 1588099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590572:-1
position: 1590572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1588099-1590572:-1:exon

LOC104913004
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104913004
product: chemokine like factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_019619714.2
SIO_010081: LOC104913004
subclass of: SO_0000673
so part of: LOC104913004
location: complement(join(1588099..1588451,1589903..1589998,1590393..1590572))
location: region:1588099-1590572:-1
so has part: feature:1590393-1590572:-1:exon
so has part: feature:1589903-1589998:-1:exon
so has part: feature:1588099-1588451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1590393-1590572:-1:exon

position:1590393:-1
position: 1590393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1589903-1589998:-1:exon

position:1589903:-1
position: 1589903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589998:-1
position: 1589998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1588099-1588451:-1:exon

position:1588451:-1
position: 1588451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104913004
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104913004
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chemokine-like factor
translation: MEALVTLLFFLLYLLKLDVKLTWLFWPLADIFNSVVAALFLLIVSLFAVIIKTNHGTLAGGVLGLVLLVLCVVDAVVLFMKISISRPRERNTPAK
SIO_010081: LOC104913004
subclass of: SO_0000673
so part of: LOC104913004
location: complement(join(1588347..1588451,1589903..1589998,1590393..1590479))
location: region:1588347-1590479:-1
so has part: feature:1590393-1590479:-1:exon
so has part: feature:1589903-1589998:-1:exon
so has part: feature:1588347-1588451:-1:exon

XP_019475259.1
type: Protein
SIO_000068: ncbiprotein

position:1588347:-1
position: 1588347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590479:-1
position: 1590479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1590393-1590479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1589903-1589998:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1588347-1588451:-1:exon

CMTM3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CMTM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1597201..1607391)
location: region:1597201-1607391:-1
so has part: feature:1597201-1607391:-1:exon
subclass of: SO_0000010

100545997
type: Gene
SIO_000068: ncbigene

position:1597201:-1
position: 1597201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607391:-1
position: 1607391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1597201-1607391:-1:exon

CMTM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CMTM3
product: CKLF like MARVEL transmembrane domain containing 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010717727.3
SIO_010081: CMTM3
subclass of: SO_0000673
so part of: CMTM3
location: complement(join(1597201..1599061,1600147..1600264,1600982..1601077,1602405..1602559,1607311..1607391))
location: region:1597201-1607391:-1
so has part: feature:1607311-1607391:-1:exon
so has part: feature:1602405-1602559:-1:exon
so has part: feature:1600982-1601077:-1:exon
so has part: feature:1600147-1600264:-1:exon
so has part: feature:1597201-1599061:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1607311-1607391:-1:exon

position:1607311:-1
position: 1607311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1602405-1602559:-1:exon

position:1602405:-1
position: 1602405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1602559:-1
position: 1602559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1600982-1601077:-1:exon

position:1600982:-1
position: 1600982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1601077:-1
position: 1601077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1600147-1600264:-1:exon

position:1600147:-1
position: 1600147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1600264:-1
position: 1600264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1597201-1599061:-1:exon

position:1599061:-1
position: 1599061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CMTM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CMTM3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: CKLF-like MARVEL transmembrane domain-containing protein 3
translation: MNQTGIRDAVRLMAQPSAPHGAPRPLQVLSFIIFICYIASSASAFMMAPLLEFLLALFXFFAYASKLNEKFKGLYWPLTDFLRCVTAAVIYFAISIAAVSKYSDGASKAAGVFGFIATIVYAIDFYITFNDLVTFLKQGSSESPERRKSEDEDSNSDSD
SIO_010081: CMTM3
subclass of: SO_0000673
so part of: CMTM3
location: complement(join(1599033..1599061,1600147..1600264,1600982..1601077,1602405..1602559,1607311..1607391))
location: region:1599033-1607391:-1
so has part: feature:1607311-1607391:-1:exon
so has part: feature:1602405-1602559:-1:exon
so has part: feature:1600982-1601077:-1:exon
so has part: feature:1600147-1600264:-1:exon
so has part: feature:1599033-1599061:-1:exon

XP_010716029.2
type: Protein
SIO_000068: ncbiprotein

position:1599033:-1
position: 1599033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1607311-1607391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1602405-1602559:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1600982-1601077:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1600147-1600264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1599033-1599061:-1:exon

CMTM4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CMTM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1610137..1623824
location: region:1610137-1623824:1
so has part: feature:1610137-1623824:1:exon
subclass of: SO_0000010

100545843
type: Gene
SIO_000068: ncbigene

position:1610137:1
position: 1610137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1623824:1
position: 1623824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610137-1623824:1:exon

CMTM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CMTM4
product: CKLF like MARVEL transmembrane domain containing 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 202 samples with support for all annotated introns
transcript id: XM_010717728.3
SIO_010081: CMTM4
subclass of: SO_0000673
so part of: CMTM4
location: join(1610137..1610330,1619453..1619551,1620437..1623824)
location: region:1610137-1623824:1
so has part: feature:1610137-1610330:1:exon
so has part: feature:1619453-1619551:1:exon
so has part: feature:1620437-1623824:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1610137-1610330:1:exon

position:1610330:1
position: 1610330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1619453-1619551:1:exon

position:1619453:1
position: 1619453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1619551:1
position: 1619551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1620437-1623824:1:exon

position:1620437:1
position: 1620437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CMTM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CMTM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CKLF-like MARVEL transmembrane domain-containing protein 4
translation: MECSPCEGLYFFEFVSCSALVVTGVLLLMFSLNLHTRIPQINWNLTDLVNTGLSTFFFFIASVVLAALNHKTGAEIAAVIFGFLAMAVYAVNTYLAIKKWRMNSRQQSSRQTSDYIRARTESREVDHRPEIQRLDA
SIO_010081: CMTM4
subclass of: SO_0000673
so part of: CMTM4
location: join(1610193..1610330,1619453..1619551,1620437..1620610)
location: region:1610193-1620610:1
so has part: feature:1610193-1610330:1:exon
so has part: feature:1619453-1619551:1:exon
so has part: feature:1620437-1620610:1:exon

XP_010716030.1
type: Protein
SIO_000068: ncbiprotein

position:1610193:1
position: 1610193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620610:1
position: 1620610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610193-1610330:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1619453-1619551:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1620437-1620610:1:exon

LOC116217126
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1639799..1646417
location: region:1639799-1646417:1
so has part: feature:1639799-1646417:1:exon
subclass of: SO_0000011

116217126
type: Gene
SIO_000068: ncbigene

position:1639799:1
position: 1639799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1646417:1
position: 1646417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1639799-1646417:1:exon

LOC116217126
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217126
product: uncharacterized LOC116217126
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004161161.1
SIO_010081: LOC116217126
subclass of: SO_0000673
so part of: LOC116217126
location: join(1639799..1643157,1643372..1646417)
location: region:1639799-1646417:1
so has part: feature:1639799-1643157:1:exon
so has part: feature:1643372-1646417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1639799-1643157:1:exon

position:1643157:1
position: 1643157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1643372-1646417:1:exon

position:1643372:1
position: 1643372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109369746
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1648329..1649503)
location: region:1648329-1649503:-1
so has part: feature:1648329-1649503:-1:exon
subclass of: SO_0000011

109369746
type: Gene
SIO_000068: ncbigene

position:1648329:-1
position: 1648329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1649503:-1
position: 1649503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1648329-1649503:-1:exon

LOC109369746
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369746
product: uncharacterized LOC109369746
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002119181.2
SIO_010081: LOC109369746
subclass of: SO_0000673
so part of: LOC109369746
location: complement(join(1648329..1648810,1649089..1649503))
location: region:1648329-1649503:-1
so has part: feature:1649089-1649503:-1:exon
so has part: feature:1648329-1648810:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1649089-1649503:-1:exon

position:1649089:-1
position: 1649089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1648329-1648810:-1:exon

position:1648810:-1
position: 1648810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912912
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1657380..1661548
location: region:1657380-1661548:1
so has part: feature:1657380-1661548:1:exon
subclass of: SO_0000010

104912912
type: Gene
SIO_000068: ncbigene

position:1657380:1
position: 1657380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661548:1
position: 1661548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657380-1661548:1:exon

LOC104912912
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912912
product: cytoplasmic dynein 1 light intermediate chain 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_010717729.3
SIO_010081: LOC104912912
subclass of: SO_0000673
so part of: LOC104912912
location: join(1657380..1657598,1658387..1658446,1659166..1659207,1659643..1659760,1660600..1661548)
location: region:1657380-1661548:1
so has part: feature:1657380-1657598:1:exon
so has part: feature:1658387-1658446:1:exon
so has part: feature:1659166-1659207:1:exon
so has part: feature:1659643-1659760:1:exon
so has part: feature:1660600-1661548:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1657380-1657598:1:exon

position:1657598:1
position: 1657598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1658387-1658446:1:exon

position:1658387:1
position: 1658387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1658446:1
position: 1658446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1659166-1659207:1:exon

position:1659166:1
position: 1659166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659207:1
position: 1659207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1659643-1659760:1:exon

position:1659643:1
position: 1659643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659760:1
position: 1659760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1660600-1661548:1:exon

position:1660600:1
position: 1660600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912912
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 light intermediate chain 2-like
translation: MVCVFFSEQVIFVSVISVAQKTKLSFNSFHRPAGWDNEKKIAILHENFTTVKPDDAYEDFIAKPPVRKLVHDKELAAEDEQVFLMKQQSFLAKQPATPTRASESPARGPAGSPRTQGRAGPANVPSASPITSVKKPDPNIKNNAASEGVLASFFNSLLSKKTGSPGSPGAGGVQSTAKKSGIGVVI
SIO_010081: LOC104912912
subclass of: SO_0000673
so part of: LOC104912912
location: join(1657395..1657598,1658387..1658446,1659166..1659207,1659643..1659760,1660600..1660736)
location: region:1657395-1660736:1
so has part: feature:1657395-1657598:1:exon
so has part: feature:1658387-1658446:1:exon
so has part: feature:1659166-1659207:1:exon
so has part: feature:1659643-1659760:1:exon
so has part: feature:1660600-1660736:1:exon

XP_010716031.1
type: Protein
SIO_000068: ncbiprotein

position:1657395:1
position: 1657395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1660736:1
position: 1660736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657395-1657598:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1658387-1658446:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1659166-1659207:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1659643-1659760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1660600-1660736:1:exon

LOC100545689
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100545689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1662455..1676267
location: region:1662455-1676267:1
so has part: feature:1662455-1676267:1:exon
subclass of: SO_0000010

100545689
type: Gene
SIO_000068: ncbigene

position:1662455:1
position: 1662455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676267:1
position: 1676267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1662455-1676267:1:exon

LOC100545689
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545689
product: cytoplasmic dynein 1 light intermediate chain 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_010717730.3
SIO_010081: LOC100545689
subclass of: SO_0000673
so part of: LOC100545689
location: join(1662455..1662644,1663051..1663167,1669165..1669395,1675042..1675208,1675533..1675626,1676031..1676267)
location: region:1662455-1676267:1
so has part: feature:1662455-1662644:1:exon
so has part: feature:1663051-1663167:1:exon
so has part: feature:1669165-1669395:1:exon
so has part: feature:1675042-1675208:1:exon
so has part: feature:1675533-1675626:1:exon
so has part: feature:1676031-1676267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1662455-1662644:1:exon

position:1662644:1
position: 1662644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1663051-1663167:1:exon

position:1663051:1
position: 1663051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1663167:1
position: 1663167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1669165-1669395:1:exon

position:1669165:1
position: 1669165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1669395:1
position: 1669395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1675042-1675208:1:exon

position:1675042:1
position: 1675042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1675208:1
position: 1675208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1675533-1675626:1:exon

position:1675533:1
position: 1675533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1675626:1
position: 1675626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1676031-1676267:1:exon

position:1676031:1
position: 1676031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100545689
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic dynein 1 light intermediate chain 2-like
translation: MSVPQPVWGVELGALSGSAVCPSFQPDHAFCLSRSSILSEVSTRSRSKLPSGKNILVFGDDGSGKTTLMAKIQGAEYGKKGRGLEYLYLNIHDEDRDDHTRCNVWILDGDLYNKGLLKFAVSAESLQDTIVVFVADMSRPWTVMESLQKWASVLQEHIDKLKIPPEEMRDMEQKFIKEFQEYVEPEEGYQGSPQRRGPSSGQEDESVSLPLGENVLTHNLGIPVLVVCTKCDAVSVLEKEHDYREEHFDFIQSHIRRFCLQYGAALIYTSVKEEKNLDLLYKYIVHKTYGFQFTTPALVVEKDAVFM
SIO_010081: LOC100545689
subclass of: SO_0000673
so part of: LOC100545689
location: join(1662470..1662644,1663051..1663167,1669165..1669395,1675042..1675208,1675533..1675626,1676031..1676170)
location: region:1662470-1676170:1
so has part: feature:1662470-1662644:1:exon
so has part: feature:1663051-1663167:1:exon
so has part: feature:1669165-1669395:1:exon
so has part: feature:1675042-1675208:1:exon
so has part: feature:1675533-1675626:1:exon
so has part: feature:1676031-1676170:1:exon

XP_010716032.1
type: Protein
SIO_000068: ncbiprotein

position:1662470:1
position: 1662470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1676170:1
position: 1676170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1662470-1662644:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1663051-1663167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1669165-1669395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1675042-1675208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1675533-1675626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1676031-1676170:1:exon

TERB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TERB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1677043..1692753
location: region:1677043-1692753:1
so has part: feature:1677043-1692753:1:exon
subclass of: SO_0000010

100545534
type: Gene
SIO_000068: ncbigene

position:1677043:1
position: 1677043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692753:1
position: 1692753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677043-1692753:1:exon

TERB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TERB1
product: telomere repeat binding bouquet formation protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019619719.2
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1677043..1677108,1678090..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687023,1688010..1688102,1688596..1688763,1689251..1689328,1690725..1692753)
location: region:1677043-1692753:1
so has part: feature:1677043-1677108:1:exon
so has part: feature:1678090-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687023:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689328:1:exon
so has part: feature:1690725-1692753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1677043-1677108:1:exon

position:1677108:1
position: 1677108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1678090-1678197:1:exon

position:1678090:1
position: 1678090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1678197:1
position: 1678197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1679151-1679261:1:exon

position:1679151:1
position: 1679151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679261:1
position: 1679261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1679454-1679582:1:exon

position:1679454:1
position: 1679454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1679582:1
position: 1679582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1680046-1680177:1:exon

position:1680046:1
position: 1680046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680177:1
position: 1680177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1680643-1680703:1:exon

position:1680643:1
position: 1680643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680703:1
position: 1680703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1680780-1680895:1:exon

position:1680780:1
position: 1680780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1680895:1
position: 1680895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1681010-1681132:1:exon

position:1681010:1
position: 1681010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681132:1
position: 1681132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1681626-1681781:1:exon

position:1681626:1
position: 1681626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1681781:1
position: 1681781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1682825-1682956:1:exon

position:1682825:1
position: 1682825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1682956:1
position: 1682956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1683565-1683690:1:exon

position:1683565:1
position: 1683565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1683690:1
position: 1683690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1684638-1684819:1:exon

position:1684638:1
position: 1684638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1684819:1
position: 1684819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1685549-1685889:1:exon

position:1685549:1
position: 1685549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685889:1
position: 1685889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1686956-1687023:1:exon

position:1686956:1
position: 1686956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1687023:1
position: 1687023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1688010-1688102:1:exon

position:1688010:1
position: 1688010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688102:1
position: 1688102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1688596-1688763:1:exon

position:1688596:1
position: 1688596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1688763:1
position: 1688763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1689251-1689328:1:exon

position:1689251:1
position: 1689251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1689328:1
position: 1689328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1690725-1692753:1:exon

position:1690725:1
position: 1690725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TERB1
product: telomere repeat binding bouquet formation protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019619720.2
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1677043..1677108,1678090..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687017,1688010..1688102,1688596..1688763,1689251..1689328,1690725..1692753)
location: region:1677043-1692753:1
so has part: feature:1677043-1677108:1:exon
so has part: feature:1678090-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687017:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689328:1:exon
so has part: feature:1690725-1692753:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1677043-1677108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678090-1678197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1686956-1687017:1:exon

position:1687017:1
position: 1687017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1689251-1689328:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690725-1692753:1:exon

TERB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TERB1
product: telomere repeat binding bouquet formation protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019619722.1
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1677043..1677108,1678090..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687023,1688010..1688102,1688596..1688763,1689251..1689328,1690725..1690838,1692657..1692746)
location: region:1677043-1692746:1
so has part: feature:1677043-1677108:1:exon
so has part: feature:1678090-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687023:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689328:1:exon
so has part: feature:1690725-1690838:1:exon
so has part: feature:1692657-1692746:1:exon

position:1692746:1
position: 1692746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677043-1677108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678090-1678197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1686956-1687023:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1689251-1689328:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1690725-1690838:1:exon

position:1690838:1
position: 1690838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1692657-1692746:1:exon

position:1692657:1
position: 1692657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TERB1
product: telomere repeat binding bouquet formation protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019619715.2
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1677043..1677108,1678090..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687023,1688010..1688102,1688596..1688763,1689251..1689882)
location: region:1677043-1689882:1
so has part: feature:1677043-1677108:1:exon
so has part: feature:1678090-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687023:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689882:1:exon

position:1689882:1
position: 1689882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677043-1677108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678090-1678197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1686956-1687023:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1689251-1689882:1:exon

TERB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TERB1
product: telomere repeat binding bouquet formation protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019619716.2
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1677043..1677108,1678090..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687017,1688010..1688102,1688596..1688763,1689251..1689882)
location: region:1677043-1689882:1
so has part: feature:1677043-1677108:1:exon
so has part: feature:1678090-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687017:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1677043-1677108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678090-1678197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1686956-1687017:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1689251-1689882:1:exon

TERB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TERB1
product: telomere repeat binding bouquet formation protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019619717.2
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1677043..1677108,1678139..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687023,1688010..1688102,1688596..1688763,1689251..1689882)
location: region:1677043-1689882:1
so has part: feature:1677043-1677108:1:exon
so has part: feature:1678139-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687023:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689882:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1677043-1677108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678139-1678197:1:exon

position:1678139:1
position: 1678139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1686956-1687023:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1689251-1689882:1:exon

TERB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TERB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 1 isoform X6
translation: MLFPCTYRTRTGMQPKMENQKVQKMQCDMKTDLNLLLECLKYRMDCPSSQKETLITIYSICQQNSEACEYLREIGGLEFINDLAKSSVHGIVKEAALFTLGIVIESNVYCQQTLCSSALFEELTLFLTNKDSDVNLKRMSVYVILALVSNNKLGQTYVRETGCIDLLLQLFRTTLCTPELNLSDENTNSCYQLWSSVCSTLCACVNNPQNEANQKICCSVFPYAKEWLESCMEPEIVRPICSFVGLTVANNSLVQKYFVSVGGLDTLAQVLIKLMHDDSCLSHSSTKLAIVVTKTLDACIANDSAMTVVLAKYHTVSELLNLLSNDTLDTGEKMSVILTIGHCTEVCEENQCELLKNHGLSLMIQVLTESQDEELHKAATFVLQNCKQMTEQLSLKINEKSTSVKNAEELEVGMQIRERSQQNYWKKAKDILHRINLIEKEHDEISMFMEEGAEGRLFDRSSEDSIEASKSREVNPSDTKACIERTCKELCGPQLTSKMDDRVLALAINSSALTVNPVKASARKSKQNYIPRSVYEMQSDTAIQSHSVNEKTACEKSQSFLQERKGLLQQPVKTIKHMKWASTSGTDQHSFYSEIAKEAKSNLITTASLKMSDFMCLGCTTTGLSLNSRTFSKMLQTCPYLCGRHRVILEAEERYKKKLQKSSDSNKRHAAYEKIVLTPVKKGKLLVETSLKSKQDNFQSILLTPIRKSKPNTLNRYEHNKNTQLIEEYNLQPTYEK
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1678116..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687023,1688010..1688102,1688596..1688763,1689251..1689328,1690725..1690838,1692657..1692658)
location: region:1678116-1692658:1
so has part: feature:1678116-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687023:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689328:1:exon
so has part: feature:1690725-1690838:1:exon
so has part: feature:1692657-1692658:1:exon

XP_019475267.1
type: Protein
SIO_000068: ncbiprotein

position:1678116:1
position: 1678116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1692658:1
position: 1692658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678116-1678197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686956-1687023:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689251-1689328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1690725-1690838:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1692657-1692658:1:exon

TERB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TERB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 1 isoform X4
translation: MLFPCTYRTRTGMQPKMENQKVQKMQCDMKTDLNLLLECLKYRMDCPSSQKETLITIYSICQQNSEACEYLREIGGLEFINDLAKSSVHGIVKEAALFTLGIVIESNVYCQQTLCSSALFEELTLFLTNKDSDVNLKRMSVYVILALVSNNKLGQTYVRETGCIDLLLQLFRTTLCTPELNLSDENTNSCYQLWSSVCSTLCACVNNPQNEANQKICCSVFPYAKEWLESCMEPEIVRPICSFVGLTVANNSLVQKYFVSVGGLDTLAQVLIKLMHDDSCLSHSSTKLAIVVTKTLDACIANDSAMTVVLAKYHTVSELLNLLSNDTLDTGEKMSVILTIGHCTEVCEENQCELLKNHGLSLMIQVLTESQDEELHKAATFVLQNCKQMTEQLSLKINEKSTSVKNAEELEVGMQIRERSQQNYWKKAKDILHRINLIEKEHDEISMFMEEGAEGRLFDRSSEDSIEASKSREVNPSDTKACIERTCKELCGPQLTSKMDDRVLALAINSSALTVNPVKASARKSKQNYIPRSVYEMQSDTAIQSHSVNEKTACEKSQSFLQERKGLLQQPVKTIKHMKWASTSGTDQHSFYSEIAKEAKSNLITTASLKMSDFMCLGCTTTGLSLNSRTFSKMLQTCPYLCGRHRVILEAEERYKKKLQKSSDSNKRHAAYEKIVLTPVKKGKLLVETSLKSKQDNFQSILLTPIRKSKPNTLNRYEHNKNTQLIEEYNLQPTYEKCEYHQKISSVTSITER
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1678116..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687023,1688010..1688102,1688596..1688763,1689251..1689328,1690725..1690888)
location: region:1678116-1690888:1
so has part: feature:1678116-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687023:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689328:1:exon
so has part: feature:1690725-1690888:1:exon

XP_019475264.1
type: Protein
SIO_000068: ncbiprotein

position:1690888:1
position: 1690888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678116-1678197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686956-1687023:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689251-1689328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1690725-1690888:1:exon

TERB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TERB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 1 isoform X5
translation: MLFPCTYRTRTGMQPKMENQKVQKMQCDMKTDLNLLLECLKYRMDCPSSQKETLITIYSICQQNSEACEYLREIGGLEFINDLAKSSVHGIVKEAALFTLGIVIESNVYCQQTLCSSALFEELTLFLTNKDSDVNLKRMSVYVILALVSNNKLGQTYVRETGCIDLLLQLFRTTLCTPELNLSDENTNSCYQLWSSVCSTLCACVNNPQNEANQKICCSVFPYAKEWLESCMEPEIVRPICSFVGLTVANNSLVQKYFVSVGGLDTLAQVLIKLMHDDSCLSHSSTKLAIVVTKTLDACIANDSAMTVVLAKYHTVSELLNLLSNDTLDTGEKMSVILTIGHCTEVCEENQCELLKNHGLSLMIQVLTESQDEELHKAATFVLQNCKQMTEQLSLKINEKSTSVKNAEELEVGMQIRERSQQNYWKKAKDILHRINLIEKEHDEISMFMEEGAEGRLFDRSSEDSIEASKSREVNPSDTKACIERTCKELCGPQLTSKMDDRVLALAINSSALTVNPVKASARKSKQNYIPRSVYEMQSDTAIQSHSVNEKTACEKSQSFLQERKGLLQQPVKTIKHMKWASTSDQHSFYSEIAKEAKSNLITTASLKMSDFMCLGCTTTGLSLNSRTFSKMLQTCPYLCGRHRVILEAEERYKKKLQKSSDSNKRHAAYEKIVLTPVKKGKLLVETSLKSKQDNFQSILLTPIRKSKPNTLNRYEHNKNTQLIEEYNLQPTYEKCEYHQKISSVTSITER
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1678116..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687017,1688010..1688102,1688596..1688763,1689251..1689328,1690725..1690888)
location: region:1678116-1690888:1
so has part: feature:1678116-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687017:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689328:1:exon
so has part: feature:1690725-1690888:1:exon

XP_019475265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1678116-1678197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686956-1687017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689251-1689328:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1690725-1690888:1:exon

TERB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TERB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 1 isoform X1
translation: MLFPCTYRTRTGMQPKMENQKVQKMQCDMKTDLNLLLECLKYRMDCPSSQKETLITIYSICQQNSEACEYLREIGGLEFINDLAKSSVHGIVKEAALFTLGIVIESNVYCQQTLCSSALFEELTLFLTNKDSDVNLKRMSVYVILALVSNNKLGQTYVRETGCIDLLLQLFRTTLCTPELNLSDENTNSCYQLWSSVCSTLCACVNNPQNEANQKICCSVFPYAKEWLESCMEPEIVRPICSFVGLTVANNSLVQKYFVSVGGLDTLAQVLIKLMHDDSCLSHSSTKLAIVVTKTLDACIANDSAMTVVLAKYHTVSELLNLLSNDTLDTGEKMSVILTIGHCTEVCEENQCELLKNHGLSLMIQVLTESQDEELHKAATFVLQNCKQMTEQLSLKINEKSTSVKNAEELEVGMQIRERSQQNYWKKAKDILHRINLIEKEHDEISMFMEEGAEGRLFDRSSEDSIEASKSREVNPSDTKACIERTCKELCGPQLTSKMDDRVLALAINSSALTVNPVKASARKSKQNYIPRSVYEMQSDTAIQSHSVNEKTACEKSQSFLQERKGLLQQPVKTIKHMKWASTSGTDQHSFYSEIAKEAKSNLITTASLKMSDFMCLGCTTTGLSLNSRTFSKMLQTCPYLCGRHRVILEAEERYKKKLQKSSDSNKRHAAYEKIVLTPVKKGKLLVETSLKSKQDNFQSKALTWKLVQKHLLSEQFSSRASPQVLVDRSYNKVLDSVQNLSDNVHSIIVKLLHYFTIKFSGTLLNPSRITFVPPAIFCFVLMLKM
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1678116..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687023,1688010..1688102,1688596..1688763,1689251..1689591)
location: region:1678116-1689591:1
so has part: feature:1678116-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687023:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689591:1:exon

XP_019475260.1
type: Protein
SIO_000068: ncbiprotein

position:1689591:1
position: 1689591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678116-1678197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686956-1687023:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689251-1689591:1:exon

TERB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TERB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 1 isoform X2
translation: MLFPCTYRTRTGMQPKMENQKVQKMQCDMKTDLNLLLECLKYRMDCPSSQKETLITIYSICQQNSEACEYLREIGGLEFINDLAKSSVHGIVKEAALFTLGIVIESNVYCQQTLCSSALFEELTLFLTNKDSDVNLKRMSVYVILALVSNNKLGQTYVRETGCIDLLLQLFRTTLCTPELNLSDENTNSCYQLWSSVCSTLCACVNNPQNEANQKICCSVFPYAKEWLESCMEPEIVRPICSFVGLTVANNSLVQKYFVSVGGLDTLAQVLIKLMHDDSCLSHSSTKLAIVVTKTLDACIANDSAMTVVLAKYHTVSELLNLLSNDTLDTGEKMSVILTIGHCTEVCEENQCELLKNHGLSLMIQVLTESQDEELHKAATFVLQNCKQMTEQLSLKINEKSTSVKNAEELEVGMQIRERSQQNYWKKAKDILHRINLIEKEHDEISMFMEEGAEGRLFDRSSEDSIEASKSREVNPSDTKACIERTCKELCGPQLTSKMDDRVLALAINSSALTVNPVKASARKSKQNYIPRSVYEMQSDTAIQSHSVNEKTACEKSQSFLQERKGLLQQPVKTIKHMKWASTSDQHSFYSEIAKEAKSNLITTASLKMSDFMCLGCTTTGLSLNSRTFSKMLQTCPYLCGRHRVILEAEERYKKKLQKSSDSNKRHAAYEKIVLTPVKKGKLLVETSLKSKQDNFQSKALTWKLVQKHLLSEQFSSRASPQVLVDRSYNKVLDSVQNLSDNVHSIIVKLLHYFTIKFSGTLLNPSRITFVPPAIFCFVLMLKM
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1678116..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687017,1688010..1688102,1688596..1688763,1689251..1689591)
location: region:1678116-1689591:1
so has part: feature:1678116-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687017:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689591:1:exon

XP_019475261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1678116-1678197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686956-1687017:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689251-1689591:1:exon

TERB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TERB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 1 isoform X3
translation: MQPKMENQKVQKMQCDMKTDLNLLLECLKYRMDCPSSQKETLITIYSICQQNSEACEYLREIGGLEFINDLAKSSVHGIVKEAALFTLGIVIESNVYCQQTLCSSALFEELTLFLTNKDSDVNLKRMSVYVILALVSNNKLGQTYVRETGCIDLLLQLFRTTLCTPELNLSDENTNSCYQLWSSVCSTLCACVNNPQNEANQKICCSVFPYAKEWLESCMEPEIVRPICSFVGLTVANNSLVQKYFVSVGGLDTLAQVLIKLMHDDSCLSHSSTKLAIVVTKTLDACIANDSAMTVVLAKYHTVSELLNLLSNDTLDTGEKMSVILTIGHCTEVCEENQCELLKNHGLSLMIQVLTESQDEELHKAATFVLQNCKQMTEQLSLKINEKSTSVKNAEELEVGMQIRERSQQNYWKKAKDILHRINLIEKEHDEISMFMEEGAEGRLFDRSSEDSIEASKSREVNPSDTKACIERTCKELCGPQLTSKMDDRVLALAINSSALTVNPVKASARKSKQNYIPRSVYEMQSDTAIQSHSVNEKTACEKSQSFLQERKGLLQQPVKTIKHMKWASTSGTDQHSFYSEIAKEAKSNLITTASLKMSDFMCLGCTTTGLSLNSRTFSKMLQTCPYLCGRHRVILEAEERYKKKLQKSSDSNKRHAAYEKIVLTPVKKGKLLVETSLKSKQDNFQSKALTWKLVQKHLLSEQFSSRASPQVLVDRSYNKVLDSVQNLSDNVHSIIVKLLHYFTIKFSGTLLNPSRITFVPPAIFCFVLMLKM
SIO_010081: TERB1
subclass of: SO_0000673
so part of: TERB1
location: join(1678152..1678197,1679151..1679261,1679454..1679582,1680046..1680177,1680643..1680703,1680780..1680895,1681010..1681132,1681626..1681781,1682825..1682956,1683565..1683690,1684638..1684819,1685549..1685889,1686956..1687023,1688010..1688102,1688596..1688763,1689251..1689591)
location: region:1678152-1689591:1
so has part: feature:1678152-1678197:1:exon
so has part: feature:1679151-1679261:1:exon
so has part: feature:1679454-1679582:1:exon
so has part: feature:1680046-1680177:1:exon
so has part: feature:1680643-1680703:1:exon
so has part: feature:1680780-1680895:1:exon
so has part: feature:1681010-1681132:1:exon
so has part: feature:1681626-1681781:1:exon
so has part: feature:1682825-1682956:1:exon
so has part: feature:1683565-1683690:1:exon
so has part: feature:1684638-1684819:1:exon
so has part: feature:1685549-1685889:1:exon
so has part: feature:1686956-1687023:1:exon
so has part: feature:1688010-1688102:1:exon
so has part: feature:1688596-1688763:1:exon
so has part: feature:1689251-1689591:1:exon

XP_019475262.1
type: Protein
SIO_000068: ncbiprotein

position:1678152:1
position: 1678152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678152-1678197:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1679151-1679261:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1679454-1679582:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1680046-1680177:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680643-1680703:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1680780-1680895:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1681010-1681132:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1681626-1681781:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1682825-1682956:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1683565-1683690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1684638-1684819:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1685549-1685889:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1686956-1687023:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1688010-1688102:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1688596-1688763:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1689251-1689591:1:exon

LOC104912913
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912913
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1686344..1691976)
location: region:1686344-1691976:-1
so has part: feature:1686344-1691976:-1:exon
subclass of: SO_0000011

104912913
type: Gene
SIO_000068: ncbigene

position:1686344:-1
position: 1686344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1691976:-1
position: 1691976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1686344-1691976:-1:exon

LOC104912913
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912913
product: uncharacterized LOC104912913
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_004161162.1
SIO_010081: LOC104912913
subclass of: SO_0000673
so part of: LOC104912913
location: complement(join(1686344..1686421,1687386..1687476,1688664..1688694,1689876..1689957,1691938..1691976))
location: region:1686344-1691976:-1
so has part: feature:1691938-1691976:-1:exon
so has part: feature:1689876-1689957:-1:exon
so has part: feature:1688664-1688694:-1:exon
so has part: feature:1687386-1687476:-1:exon
so has part: feature:1686344-1686421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1691938-1691976:-1:exon

position:1691938:-1
position: 1691938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1689876-1689957:-1:exon

position:1689876:-1
position: 1689876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689957:-1
position: 1689957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1688664-1688694:-1:exon

position:1688664:-1
position: 1688664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1688694:-1
position: 1688694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1687386-1687476:-1:exon

position:1687386:-1
position: 1687386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687476:-1
position: 1687476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1686344-1686421:-1:exon

position:1686421:-1
position: 1686421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NAE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1694771..1706692
location: region:1694771-1706692:1
so has part: feature:1694771-1706692:1:exon
subclass of: SO_0000010

100545381
type: Gene
SIO_000068: ncbigene

position:1694771:1
position: 1694771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1706692:1
position: 1706692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1694771-1706692:1:exon

NAE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NAE1
product: NEDD8 activating enzyme E1 subunit 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010717732.3
SIO_010081: NAE1
subclass of: SO_0000673
so part of: NAE1
location: join(1694771..1695245,1695338..1695398,1696320..1696350,1696971..1697042,1697344..1697423,1697816..1697925,1698230..1698339,1698867..1698929,1699177..1699240,1700276..1700367,1700949..1701008,1701098..1701231,1702175..1702250,1702597..1702636,1703604..1703690,1704709..1704801,1705253..1705367,1705439..1705488,1706462..1706692)
location: region:1694771-1706692:1
so has part: feature:1694771-1695245:1:exon
so has part: feature:1695338-1695398:1:exon
so has part: feature:1696320-1696350:1:exon
so has part: feature:1696971-1697042:1:exon
so has part: feature:1697344-1697423:1:exon
so has part: feature:1697816-1697925:1:exon
so has part: feature:1698230-1698339:1:exon
so has part: feature:1698867-1698929:1:exon
so has part: feature:1699177-1699240:1:exon
so has part: feature:1700276-1700367:1:exon
so has part: feature:1700949-1701008:1:exon
so has part: feature:1701098-1701231:1:exon
so has part: feature:1702175-1702250:1:exon
so has part: feature:1702597-1702636:1:exon
so has part: feature:1703604-1703690:1:exon
so has part: feature:1704709-1704801:1:exon
so has part: feature:1705253-1705367:1:exon
so has part: feature:1705439-1705488:1:exon
so has part: feature:1706462-1706692:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1694771-1695245:1:exon

position:1695245:1
position: 1695245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1695338-1695398:1:exon

position:1695338:1
position: 1695338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695398:1
position: 1695398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1696320-1696350:1:exon

position:1696320:1
position: 1696320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1696350:1
position: 1696350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1696971-1697042:1:exon

position:1696971:1
position: 1696971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697042:1
position: 1697042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1697344-1697423:1:exon

position:1697344:1
position: 1697344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697423:1
position: 1697423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1697816-1697925:1:exon

position:1697816:1
position: 1697816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1697925:1
position: 1697925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1698230-1698339:1:exon

position:1698230:1
position: 1698230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698339:1
position: 1698339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1698867-1698929:1:exon

position:1698867:1
position: 1698867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1698929:1
position: 1698929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1699177-1699240:1:exon

position:1699177:1
position: 1699177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1699240:1
position: 1699240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1700276-1700367:1:exon

position:1700276:1
position: 1700276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1700367:1
position: 1700367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1700949-1701008:1:exon

position:1700949:1
position: 1700949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701008:1
position: 1701008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1701098-1701231:1:exon

position:1701098:1
position: 1701098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1701231:1
position: 1701231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1702175-1702250:1:exon

position:1702175:1
position: 1702175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702250:1
position: 1702250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1702597-1702636:1:exon

position:1702597:1
position: 1702597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1702636:1
position: 1702636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1703604-1703690:1:exon

position:1703604:1
position: 1703604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1703690:1
position: 1703690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1704709-1704801:1:exon

position:1704709:1
position: 1704709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1704801:1
position: 1704801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1705253-1705367:1:exon

position:1705253:1
position: 1705253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705367:1
position: 1705367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1705439-1705488:1:exon

position:1705439:1
position: 1705439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705488:1
position: 1705488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1706462-1706692:1:exon

position:1706462:1
position: 1706462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NAE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NAE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NEDD8-activating enzyme E1 regulatory subunit
translation: MFMFLFQYRLWGDHGQEALESAHVCVINATATGTEILKNLVLPGIGSFTIVDGNRVSGEDVGNNFFLQKSHIGQSRAQSATELLQELNSDVSGNFVEESPENLLDNDPSFFNRFNLVVATQLSESTVLRLAELLWNFNIPLLICRTYGLVGYMRVIIKEHPVVESHPDNALEDLRLDKPFPELTEHIQSYDLDHMDKKDHSHTPWIVIVAKYLTKWFNEKSDQLPKSYKEKEAFRQLIRQGILKNENGTPEDEENFEEAIKNVNTALNTTKIPRCIEEIFNDDCCINLTEQSPSFWILVRAVKEFVANEGQGCLPVRGTIPDMIADSSKFIKLQNVYREKAKRDIAAVGSHAAKLLQSLGKAPESISERELKSLCSNSAFLRVVRCRSLSEEYGLNTFNKDEIISNMDNPDSEVVLYLMLRAVDRFYKQHGRYPGVYNYQVEDDIGKLKSCLTSFLQEHGLSVVVKDDYVHEFCRYGAAEPHAIAAFMGGAAAQEIIKVITGQFVIFNNTYIYSGMSQTSATFQL
SIO_010081: NAE1
subclass of: SO_0000673
so part of: NAE1
location: join(1695116..1695245,1695338..1695398,1696320..1696350,1696971..1697042,1697344..1697423,1697816..1697925,1698230..1698339,1698867..1698929,1699177..1699240,1700276..1700367,1700949..1701008,1701098..1701231,1702175..1702250,1702597..1702636,1703604..1703690,1704709..1704801,1705253..1705367,1705439..1705488,1706462..1706571)
location: region:1695116-1706571:1
so has part: feature:1695116-1695245:1:exon
so has part: feature:1695338-1695398:1:exon
so has part: feature:1696320-1696350:1:exon
so has part: feature:1696971-1697042:1:exon
so has part: feature:1697344-1697423:1:exon
so has part: feature:1697816-1697925:1:exon
so has part: feature:1698230-1698339:1:exon
so has part: feature:1698867-1698929:1:exon
so has part: feature:1699177-1699240:1:exon
so has part: feature:1700276-1700367:1:exon
so has part: feature:1700949-1701008:1:exon
so has part: feature:1701098-1701231:1:exon
so has part: feature:1702175-1702250:1:exon
so has part: feature:1702597-1702636:1:exon
so has part: feature:1703604-1703690:1:exon
so has part: feature:1704709-1704801:1:exon
so has part: feature:1705253-1705367:1:exon
so has part: feature:1705439-1705488:1:exon
so has part: feature:1706462-1706571:1:exon

XP_010716034.1
type: Protein
SIO_000068: ncbiprotein

position:1695116:1
position: 1695116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1706571:1
position: 1706571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1695116-1695245:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1695338-1695398:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1696320-1696350:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1696971-1697042:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1697344-1697423:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1697816-1697925:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1698230-1698339:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1698867-1698929:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1699177-1699240:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1700276-1700367:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1700949-1701008:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1701098-1701231:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1702175-1702250:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1702597-1702636:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1703604-1703690:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1704709-1704801:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1705253-1705367:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1705439-1705488:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1706462-1706571:1:exon

CA7
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1711388..1720627)
location: region:1711388-1720627:-1
so has part: feature:1711388-1720627:-1:exon
subclass of: SO_0000010

100544301
type: Gene
SIO_000068: ncbigene

position:1711388:-1
position: 1711388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1720627:-1
position: 1720627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1711388-1720627:-1:exon

CA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CA7
product: carbonic anhydrase 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_003209819.4
SIO_010081: CA7
subclass of: SO_0000673
so part of: CA7
location: complement(join(1711388..1712906,1713195..1713350,1714857..1714919,1715173..1715268,1715908..1716026,1718425..1718622,1720539..1720627))
location: region:1711388-1720627:-1
so has part: feature:1720539-1720627:-1:exon
so has part: feature:1718425-1718622:-1:exon
so has part: feature:1715908-1716026:-1:exon
so has part: feature:1715173-1715268:-1:exon
so has part: feature:1714857-1714919:-1:exon
so has part: feature:1713195-1713350:-1:exon
so has part: feature:1711388-1712906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1720539-1720627:-1:exon

position:1720539:-1
position: 1720539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1718425-1718622:-1:exon

position:1718425:-1
position: 1718425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1718622:-1
position: 1718622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1715908-1716026:-1:exon

position:1715908:-1
position: 1715908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1716026:-1
position: 1716026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1715173-1715268:-1:exon

position:1715173:-1
position: 1715173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1715268:-1
position: 1715268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1714857-1714919:-1:exon

position:1714857:-1
position: 1714857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714919:-1
position: 1714919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1713195-1713350:-1:exon

position:1713195:-1
position: 1713195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1713350:-1
position: 1713350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1711388-1712906:-1:exon

position:1712906:-1
position: 1712906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbonic anhydrase 7
translation: MTGHHSWGYGQDDGPAEWHKSYPIAQGNRQSPIDIISAKAVYDPKLMPLVISYESCTSLNISNNGHSVMVEFEDIDDKTVISGGPFENPFRLKQFHFHWGAKHSEGSEHTIDGKPFPCELHLVHWNAKKYATFGEAAAAPDGLAVLGVFLEIGKEHANMNRLTDALYMVKFKGTKAQFRSFNPKCLLPLSLDYWTYLGSLTTPPLNESVIWVVLKEPISISEKQLEKFRMLLFTSEEDQKVQMVNNFRPPQPLKGRTVRASFKA
SIO_010081: CA7
subclass of: SO_0000673
so part of: CA7
location: complement(join(1712784..1712906,1713195..1713350,1714857..1714919,1715173..1715268,1715908..1716026,1718425..1718622,1720539..1720578))
location: region:1712784-1720578:-1
so has part: feature:1720539-1720578:-1:exon
so has part: feature:1718425-1718622:-1:exon
so has part: feature:1715908-1716026:-1:exon
so has part: feature:1715173-1715268:-1:exon
so has part: feature:1714857-1714919:-1:exon
so has part: feature:1713195-1713350:-1:exon
so has part: feature:1712784-1712906:-1:exon

XP_003209867.1
type: Protein
SIO_000068: ncbiprotein

position:1712784:-1
position: 1712784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1720578:-1
position: 1720578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1720539-1720578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1718425-1718622:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1715908-1716026:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1715173-1715268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1714857-1714919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1713195-1713350:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1712784-1712906:-1:exon

PDP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1726500..1733040)
location: region:1726500-1733040:-1
so has part: feature:1726500-1733040:-1:exon
subclass of: SO_0000010

100544457
type: Gene
SIO_000068: ncbigene

position:1726500:-1
position: 1726500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733040:-1
position: 1733040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1726500-1733040:-1:exon

PDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PDP2
product: pyruvate dehyrogenase phosphatase catalytic subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010717734.2
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(join(1726500..1731317,1732923..1733040))
location: region:1726500-1733040:-1
so has part: feature:1732923-1733040:-1:exon
so has part: feature:1726500-1731317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1732923-1733040:-1:exon

position:1732923:-1
position: 1732923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1726500-1731317:-1:exon

position:1731317:-1
position: 1731317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PDP2
product: pyruvate dehyrogenase phosphatase catalytic subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_003209820.4
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(join(1726500..1731317,1732609..1732910))
location: region:1726500-1732910:-1
so has part: feature:1732609-1732910:-1:exon
so has part: feature:1726500-1731317:-1:exon

position:1732910:-1
position: 1732910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1732609-1732910:-1:exon

position:1732609:-1
position: 1732609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1726500-1731317:-1:exon

PDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial
translation: MMSRTVSSWILGSARNSFVLHRRGRLYSICVPNRHKIKWKLVFSKTLLYPAGTCSLDNIFSLRKAFRHTSTEEEEFSFQLSPSQINDILRAGELSHKILDSSCKSTNSVLKFESNQLASNTPIEDRRSAATCLQTRGMMFGVFDGHAGSACAQAVSERLLHYIAVSLMSRQTLEEMELAVECMKPVIPILQLHKHPNDVEHREMTSQYFESLRVYWQHLLDLDIEPGFSLEEAMISAFKRLDSDISLEVQAPQENELVRNTALQVAFSGATACVAHIDGVHLHVANAGDCRAILGVHEEDGTWSALPLTRDHNAYDESEIRRLKREHPRSEEKTLFVNDRLLGILMPSRAFGDVQLKWSKELQHSVLENSCNVGALNIYQYVPPNYHTPPYLTAEPEVTYHKLRSKDKFLIIASDGLWEMLSNEKVVKLVAGHLTELNVQKPQLAFEKPVNLGYLHNLLLQRKNRGITSLDQNIATHLIRHAIGNNEYGEVDQEKLAAMLTLPEDLARMYRDDITVTVVYFNSEAIENYYRNNK
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(1729657..1731261)
location: region:1729657-1731261:-1
so has part: feature:1729657-1731261:-1:exon

XP_003209868.1
type: Protein
SIO_000068: ncbiprotein

position:1729657:-1
position: 1729657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1731261:-1
position: 1731261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1729657-1731261:-1:exon

PDP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PDP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial
translation: MMSRTVSSWILGSARNSFVLHRRGRLYSICVPNRHKIKWKLVFSKTLLYPAGTCSLDNIFSLRKAFRHTSTEEEEFSFQLSPSQINDILRAGELSHKILDSSCKSTNSVLKFESNQLASNTPIEDRRSAATCLQTRGMMFGVFDGHAGSACAQAVSERLLHYIAVSLMSRQTLEEMELAVECMKPVIPILQLHKHPNDVEHREMTSQYFESLRVYWQHLLDLDIEPGFSLEEAMISAFKRLDSDISLEVQAPQENELVRNTALQVAFSGATACVAHIDGVHLHVANAGDCRAILGVHEEDGTWSALPLTRDHNAYDESEIRRLKREHPRSEEKTLFVNDRLLGILMPSRAFGDVQLKWSKELQHSVLENSCNVGALNIYQYVPPNYHTPPYLTAEPEVTYHKLRSKDKFLIIASDGLWEMLSNEKVVKLVAGHLTELNVQKPQLAFEKPVNLGYLHNLLLQRKNRGITSLDQNIATHLIRHAIGNNEYGEVDQEKLAAMLTLPEDLARMYRDDITVTVVYFNSEAIENYYRNNK
SIO_010081: PDP2
subclass of: SO_0000673
so part of: PDP2
location: complement(1729657..1731261)
location: region:1729657-1731261:-1
so has part: feature:1729657-1731261:-1:exon

XP_010716036.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1729657-1731261:-1:exon

LOC109369750
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369750
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1742922..1761252)
location: region:1742922-1761252:-1
so has part: feature:1742922-1761252:-1:exon
subclass of: SO_0000011

109369750
type: Gene
SIO_000068: ncbigene

position:1742922:-1
position: 1742922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1761252:-1
position: 1761252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1742922-1761252:-1:exon

LOC109369750
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369750
product: uncharacterized LOC109369750
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XR_002119186.1
SIO_010081: LOC109369750
subclass of: SO_0000673
so part of: LOC109369750
location: complement(join(1742922..1743302,1759342..1761252))
location: region:1742922-1761252:-1
so has part: feature:1759342-1761252:-1:exon
so has part: feature:1742922-1743302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1759342-1761252:-1:exon

position:1759342:-1
position: 1759342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1742922-1743302:-1:exon

position:1743302:-1
position: 1743302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RRAD
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RRAD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1790565..1794133
location: region:1790565-1794133:1
so has part: feature:1790565-1794133:1:exon
subclass of: SO_0000010

100545072
type: Gene
SIO_000068: ncbigene

position:1790565:1
position: 1790565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1794133:1
position: 1794133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1790565-1794133:1:exon

RRAD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RRAD
product: RRAD, Ras related glycolysis inhibitor and calcium channel regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 143 samples with support for all annotated introns
transcript id: XM_010717735.3
SIO_010081: RRAD
subclass of: SO_0000673
so part of: RRAD
location: join(1790565..1790964,1791071..1791144,1791632..1791836,1793240..1794133)
location: region:1790565-1794133:1
so has part: feature:1790565-1790964:1:exon
so has part: feature:1791071-1791144:1:exon
so has part: feature:1791632-1791836:1:exon
so has part: feature:1793240-1794133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1790565-1790964:1:exon

position:1790964:1
position: 1790964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1791071-1791144:1:exon

position:1791071:1
position: 1791071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1791144:1
position: 1791144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1791632-1791836:1:exon

position:1791632:1
position: 1791632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1791836:1
position: 1791836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1793240-1794133:1:exon

position:1793240:1
position: 1793240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RRAD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RRAD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein RAD
translation: MTLNRGDKLRYLDKRRGSMPFSAHQHLHRRSMPVDERDLRAALPQDELSGLVRCTSYSPGEAHRESWASDSSDSVISSGSDSDGSLYKVILLGEHGVGKTSLARIFGGVEDGAEAEEVGNTYDRSIMVDGEEASLVVFDIWEQDDSQWLQNHCMKMGDAYIIVYSVTDKVSFEKASELRIQLRRARQTEDIPIILVGNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVKDLFEGIVRQIRLRKDSKEDNARRMANTKRRESIGKKAKRFLGRIVAKNNKKMAFKAKSKSCHDLSVL
SIO_010081: RRAD
subclass of: SO_0000673
so part of: RRAD
location: join(1790610..1790964,1791071..1791144,1791632..1791836,1793240..1793517)
location: region:1790610-1793517:1
so has part: feature:1790610-1790964:1:exon
so has part: feature:1791071-1791144:1:exon
so has part: feature:1791632-1791836:1:exon
so has part: feature:1793240-1793517:1:exon

XP_010716037.1
type: Protein
SIO_000068: ncbiprotein

position:1790610:1
position: 1790610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1793517:1
position: 1793517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1790610-1790964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1791071-1791144:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1791632-1791836:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1793240-1793517:1:exon

CIAO2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CIAO2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1821175..1825331
location: region:1821175-1825331:1
so has part: feature:1821175-1825331:1:exon
subclass of: SO_0000010

100544921
type: Gene
SIO_000068: ncbigene

position:1821175:1
position: 1821175
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1825331:1
position: 1825331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1821175-1825331:1:exon

CIAO2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CIAO2B
product: cytosolic iron-sulfur assembly component 2B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003209823.4
SIO_010081: CIAO2B
subclass of: SO_0000673
so part of: CIAO2B
location: join(<1821175..1821256,1821335..1821414,1821655..1821780,1822223..1822268,1822791..1825331)
location: region:1821175-1825331:1
so has part: feature:1821175-1821256:1:exon
so has part: feature:1821335-1821414:1:exon
so has part: feature:1821655-1821780:1:exon
so has part: feature:1822223-1822268:1:exon
so has part: feature:1822791-1825331:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1821175-1821256:1:exon

position:1821256:1
position: 1821256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1821335-1821414:1:exon

position:1821335:1
position: 1821335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821414:1
position: 1821414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1821655-1821780:1:exon

position:1821655:1
position: 1821655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821780:1
position: 1821780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1822223-1822268:1:exon

position:1822223:1
position: 1822223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1822268:1
position: 1822268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1822791-1825331:1:exon

position:1822791:1
position: 1822791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CIAO2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CIAO2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic iron-sulfur assembly component 2B
translation: RRSGERPVTAREEDDELPDSIDDREIFDLIRSINDPEHPLTLEELNVVEQVRVKVNDAESTVAVEFTPTIPHCSMATLIGLSIKVKLIRSLPERFKMDVHITPGTHASEHAVNKQLADKERVAAALENSHLLEVVNQCLSARS
SIO_010081: CIAO2B
subclass of: SO_0000673
so part of: CIAO2B
location: join(<1821175..1821256,1821335..1821414,1821655..1821780,1822223..1822268,1822791..1822888)
location: region:1821175-1822888:1
so has part: feature:1821175-1821256:1:exon
so has part: feature:1821335-1821414:1:exon
so has part: feature:1821655-1821780:1:exon
so has part: feature:1822223-1822268:1:exon
so has part: feature:1822791-1822888:1:exon

XP_003209871.2
type: Protein
SIO_000068: ncbiprotein

position:1822888:1
position: 1822888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1821175-1821256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1821335-1821414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1821655-1821780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1822223-1822268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1822791-1822888:1:exon

LOC104913005
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104913005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1837183..1844197)
location: region:1837183-1844197:-1
so has part: feature:1837183-1844197:-1:exon

104913005
type: Gene
SIO_000068: ncbigene

position:1837183:-1
position: 1837183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1844197:-1
position: 1844197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1837183-1844197:-1:exon

LOC104913005
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913005
subclass of: SO_0000673
so part of: LOC104913005
location: complement(1837183..1838079)
location: region:1837183-1838079:-1
so has part: feature:1837183-1838079:-1:exon

position:1838079:-1
position: 1838079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1837183-1838079:-1:exon

LOC104913005
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913005
subclass of: SO_0000673
so part of: LOC104913005
location: complement(1839186..1839326)
location: region:1839186-1839326:-1
so has part: feature:1839186-1839326:-1:exon

position:1839186:-1
position: 1839186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839326:-1
position: 1839326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839186-1839326:-1:exon

LOC104913005
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913005
subclass of: SO_0000673
so part of: LOC104913005
location: complement(1839815..1839913)
location: region:1839815-1839913:-1
so has part: feature:1839815-1839913:-1:exon

position:1839815:-1
position: 1839815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839913:-1
position: 1839913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1839815-1839913:-1:exon

LOC104913005
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913005
subclass of: SO_0000673
so part of: LOC104913005
location: complement(1840780..1840881)
location: region:1840780-1840881:-1
so has part: feature:1840780-1840881:-1:exon

position:1840780:-1
position: 1840780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1840881:-1
position: 1840881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1840780-1840881:-1:exon

LOC104913005
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913005
subclass of: SO_0000673
so part of: LOC104913005
location: complement(1841140..1841293)
location: region:1841140-1841293:-1
so has part: feature:1841140-1841293:-1:exon

position:1841140:-1
position: 1841140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1841293:-1
position: 1841293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841140-1841293:-1:exon

LOC104913005
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913005
subclass of: SO_0000673
so part of: LOC104913005
location: complement(1841801..1841936)
location: region:1841801-1841936:-1
so has part: feature:1841801-1841936:-1:exon

position:1841801:-1
position: 1841801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1841936:-1
position: 1841936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1841801-1841936:-1:exon

LOC104913005
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913005
subclass of: SO_0000673
so part of: LOC104913005
location: complement(1842192..1842322)
location: region:1842192-1842322:-1
so has part: feature:1842192-1842322:-1:exon

position:1842192:-1
position: 1842192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1842322:-1
position: 1842322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1842192-1842322:-1:exon

LOC104913005
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913005
subclass of: SO_0000673
so part of: LOC104913005
location: complement(1842621..1842825)
location: region:1842621-1842825:-1
so has part: feature:1842621-1842825:-1:exon

position:1842621:-1
position: 1842621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1842825:-1
position: 1842825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1842621-1842825:-1:exon

LOC104913005
type: Exon
subclass of: SO_0000147
RO_0002162: 9103
gene: LOC104913005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC104913005
subclass of: SO_0000673
so part of: LOC104913005
location: complement(1843387..1844197)
location: region:1843387-1844197:-1
so has part: feature:1843387-1844197:-1:exon

position:1843387:-1
position: 1843387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1843387-1844197:-1:exon

LOC104912915
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1845934..1847735)
location: region:1845934-1847735:-1
so has part: feature:1845934-1847735:-1:exon
subclass of: SO_0000010

104912915
type: Gene
SIO_000068: ncbigene

position:1845934:-1
position: 1845934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1847735:-1
position: 1847735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845934-1847735:-1:exon

LOC104912915
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912915
product: fatty acyl-CoA hydrolase precursor, medium chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 195 samples with support for all annotated introns
transcript id: XM_010717736.2
SIO_010081: LOC104912915
subclass of: SO_0000673
so part of: LOC104912915
location: complement(join(1845934..1846074,1846662..1846815,1847523..1847735))
location: region:1845934-1847735:-1
so has part: feature:1847523-1847735:-1:exon
so has part: feature:1846662-1846815:-1:exon
so has part: feature:1845934-1846074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1847523-1847735:-1:exon

position:1847523:-1
position: 1847523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1846662-1846815:-1:exon

position:1846662:-1
position: 1846662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1846815:-1
position: 1846815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1845934-1846074:-1:exon

position:1846074:-1
position: 1846074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA hydrolase precursor, medium chain-like
translation: MELFPVLNCFCFFPFQVFVWIHGGGLVIGEASSYDGSALAAFNSVVVVAIQYRLGIVGYFSTGDRHARGNWGYLDQVAALQWIQENIIHFGGDPGSVTICGESAGGVSVSALVLSPLAKGLFHKAISESGTAIRTSFTNKPEEEAQVGILWHI
SIO_010081: LOC104912915
subclass of: SO_0000673
so part of: LOC104912915
location: complement(join(1845949..1846074,1846662..1846815,1847523..1847704))
location: region:1845949-1847704:-1
so has part: feature:1847523-1847704:-1:exon
so has part: feature:1846662-1846815:-1:exon
so has part: feature:1845949-1846074:-1:exon

XP_010716038.1
type: Protein
SIO_000068: ncbiprotein

position:1845949:-1
position: 1845949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1847704:-1
position: 1847704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1847523-1847704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1846662-1846815:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1845949-1846074:-1:exon

LOC104912916
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1851005..1859567)
location: region:1851005-1859567:-1
so has part: feature:1851005-1859567:-1:exon
subclass of: SO_0000010

104912916
type: Gene
SIO_000068: ncbigene

position:1851005:-1
position: 1851005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1859567:-1
position: 1859567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1851005-1859567:-1:exon

LOC104912916
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912916
product: fatty acyl-CoA hydrolase precursor, medium chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 29 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010717737.3
SIO_010081: LOC104912916
subclass of: SO_0000673
so part of: LOC104912916
location: complement(join(1851005..1851608,1852382..1852478,1853167..1853316,1853933..1854068,1855842..1855964,1856526..1856679,1857016..1857149,1857572..1857716,1858459..1858663,1859413..1859567))
location: region:1851005-1859567:-1
so has part: feature:1859413-1859567:-1:exon
so has part: feature:1858459-1858663:-1:exon
so has part: feature:1857572-1857716:-1:exon
so has part: feature:1857016-1857149:-1:exon
so has part: feature:1856526-1856679:-1:exon
so has part: feature:1855842-1855964:-1:exon
so has part: feature:1853933-1854068:-1:exon
so has part: feature:1853167-1853316:-1:exon
so has part: feature:1852382-1852478:-1:exon
so has part: feature:1851005-1851608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1859413-1859567:-1:exon

position:1859413:-1
position: 1859413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1858459-1858663:-1:exon

position:1858459:-1
position: 1858459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1858663:-1
position: 1858663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1857572-1857716:-1:exon

position:1857572:-1
position: 1857572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1857716:-1
position: 1857716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1857016-1857149:-1:exon

position:1857016:-1
position: 1857016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1857149:-1
position: 1857149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1856526-1856679:-1:exon

position:1856526:-1
position: 1856526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1856679:-1
position: 1856679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1855842-1855964:-1:exon

position:1855842:-1
position: 1855842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1855964:-1
position: 1855964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1853933-1854068:-1:exon

position:1853933:-1
position: 1853933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1854068:-1
position: 1854068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1853167-1853316:-1:exon

position:1853167:-1
position: 1853167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853316:-1
position: 1853316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1852382-1852478:-1:exon

position:1852382:-1
position: 1852382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1852478:-1
position: 1852478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1851005-1851608:-1:exon

position:1851608:-1
position: 1851608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912916
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA hydrolase precursor, medium chain-like
translation: MATEKNTLLSLILIAGLTALVATGQKAEQPEVVTKYGTARGFQIKVDAAERSVNVFLGLPFAKPPVGPLRFSEPQPPEPWKGVRDATSYPPMCLQDKVTGQFVSDVIANRKEKVRLQMSEDCLYLNIYTPVSTEKQEKLPVFVWIHGGGLVIGAASSYDGSALAAFDSVVVVAIQYRLGIVGYFSTGDRHARGNWGYLDQVAALQWIQENIIHFGGDPGSVTICGESAGGVSVSALVLSPLAKGLFHKAISESGTAIRILFTDKPEEEAQVGILWHINLPTELLPVKMDEYLENTDDPAELQDRFLELLGDFIIVIASIKAQKSEAPTYFFEYQRRPTSYWDTKPEYVKADHGDEVHFVFGGSYLAGDISLRGFWNHELCLLQAESIVATALMNVLITEWFTTERNPNGEGLAEWPLRNLNEECLEINLRERKARKLKEKKVDFWEKVMFGKPTRKRMENKKAKLEL
SIO_010081: LOC104912916
subclass of: SO_0000673
so part of: LOC104912916
location: complement(join(1851419..1851608,1852382..1852478,1853167..1853316,1853933..1854068,1855842..1855964,1856526..1856679,1857016..1857149,1857572..1857716,1858459..1858663,1859413..1859482))
location: region:1851419-1859482:-1
so has part: feature:1859413-1859482:-1:exon
so has part: feature:1858459-1858663:-1:exon
so has part: feature:1857572-1857716:-1:exon
so has part: feature:1857016-1857149:-1:exon
so has part: feature:1856526-1856679:-1:exon
so has part: feature:1855842-1855964:-1:exon
so has part: feature:1853933-1854068:-1:exon
so has part: feature:1853167-1853316:-1:exon
so has part: feature:1852382-1852478:-1:exon
so has part: feature:1851419-1851608:-1:exon

XP_010716039.2
type: Protein
SIO_000068: ncbiprotein

position:1851419:-1
position: 1851419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1859482:-1
position: 1859482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1859413-1859482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1858459-1858663:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1857572-1857716:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1857016-1857149:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1856526-1856679:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1855842-1855964:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1853933-1854068:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1853167-1853316:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1852382-1852478:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1851419-1851608:-1:exon

LOC116217127
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217127
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1861467..1865271)
location: region:1861467-1865271:-1
so has part: feature:1861467-1865271:-1:exon
subclass of: SO_0000010

116217127
type: Gene
SIO_000068: ncbigene

position:1861467:-1
position: 1861467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1865271:-1
position: 1865271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1861467-1865271:-1:exon

LOC116217127
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC116217127
product: fatty acyl-CoA hydrolase precursor, medium chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 197 samples with support for all annotated introns
transcript id: XM_031555425.1
SIO_010081: LOC116217127
subclass of: SO_0000673
so part of: LOC116217127
location: complement(join(1861467..1862277,1862681..1862753,1862949..1863080,1863304..1863451,1864174..1864260,1864346..1864486,1865146..1865271))
location: region:1861467-1865271:-1
so has part: feature:1865146-1865271:-1:exon
so has part: feature:1864346-1864486:-1:exon
so has part: feature:1864174-1864260:-1:exon
so has part: feature:1863304-1863451:-1:exon
so has part: feature:1862949-1863080:-1:exon
so has part: feature:1862681-1862753:-1:exon
so has part: feature:1861467-1862277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1865146-1865271:-1:exon

position:1865146:-1
position: 1865146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1864346-1864486:-1:exon

position:1864346:-1
position: 1864346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1864486:-1
position: 1864486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1864174-1864260:-1:exon

position:1864174:-1
position: 1864174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1864260:-1
position: 1864260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1863304-1863451:-1:exon

position:1863304:-1
position: 1863304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1863451:-1
position: 1863451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1862949-1863080:-1:exon

position:1862949:-1
position: 1862949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1863080:-1
position: 1863080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1862681-1862753:-1:exon

position:1862681:-1
position: 1862681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1862753:-1
position: 1862753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1861467-1862277:-1:exon

position:1862277:-1
position: 1862277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217127
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC116217127
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fatty acyl-CoA hydrolase precursor, medium chain-like
translation: MPAMFIGSCVDGVFFPKSPRQLLSEKAISAIPYIVGITNSEFGWGLPKVMKFPDFTDGLDKEVAYQVLKNILESSFEGFTSDIIDLVFNEYIGKAESRAQVRDGLLDAIGDHLFVLSAIEVARYHRDAGHPVYFYEFQHRPSSASGVVPEFVKADHGSEIAFVFGKPFLAGNATEEENKLSRTVMKYWTNFARNGNPNGEGLVHWPQYDLDERYLEIDLIQKAAKKLKEDKMEFWVQLTKQMRSERRREHTDL
SIO_010081: LOC116217127
subclass of: SO_0000673
so part of: LOC116217127
location: complement(join(1862100..1862277,1862681..1862753,1862949..1863080,1863304..1863451,1864174..1864260,1864346..1864486,1865146..1865148))
location: region:1862100-1865148:-1
so has part: feature:1865146-1865148:-1:exon
so has part: feature:1864346-1864486:-1:exon
so has part: feature:1864174-1864260:-1:exon
so has part: feature:1863304-1863451:-1:exon
so has part: feature:1862949-1863080:-1:exon
so has part: feature:1862681-1862753:-1:exon
so has part: feature:1862100-1862277:-1:exon

XP_031411285.1
type: Protein
SIO_000068: ncbiprotein

position:1862100:-1
position: 1862100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1865148:-1
position: 1865148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1865146-1865148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1864346-1864486:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1864174-1864260:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1863304-1863451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1862949-1863080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1862681-1862753:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1862100-1862277:-1:exon

PDCD2L
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PDCD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1867133..1871044)
location: region:1867133-1871044:-1
so has part: feature:1867133-1871044:-1:exon
subclass of: SO_0000010

100540254
type: Gene
SIO_000068: ncbigene

position:1867133:-1
position: 1867133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1871044:-1
position: 1871044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1867133-1871044:-1:exon

PDCD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PDCD2L
product: programmed cell death 2 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_003213761.4
SIO_010081: PDCD2L
subclass of: SO_0000673
so part of: PDCD2L
location: complement(join(1867133..1867289,1867897..1868045,1869061..1869174,1869980..1870374,1870476..1871044))
location: region:1867133-1871044:-1
so has part: feature:1870476-1871044:-1:exon
so has part: feature:1869980-1870374:-1:exon
so has part: feature:1869061-1869174:-1:exon
so has part: feature:1867897-1868045:-1:exon
so has part: feature:1867133-1867289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1870476-1871044:-1:exon

position:1870476:-1
position: 1870476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1869980-1870374:-1:exon

position:1869980:-1
position: 1869980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1870374:-1
position: 1870374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1869061-1869174:-1:exon

position:1869061:-1
position: 1869061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869174:-1
position: 1869174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1867897-1868045:-1:exon

position:1867897:-1
position: 1867897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1868045:-1
position: 1868045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1867133-1867289:-1:exon

position:1867289:-1
position: 1867289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDCD2L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PDCD2L
product: programmed cell death 2 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_031555424.1
SIO_010081: PDCD2L
subclass of: SO_0000673
so part of: PDCD2L
location: complement(join(1867133..1867289,1867897..1868045,1869061..1869174,1869980..1870374,1870465..1871040))
location: region:1867133-1871040:-1
so has part: feature:1870465-1871040:-1:exon
so has part: feature:1869980-1870374:-1:exon
so has part: feature:1869061-1869174:-1:exon
so has part: feature:1867897-1868045:-1:exon
so has part: feature:1867133-1867289:-1:exon

position:1871040:-1
position: 1871040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870465-1871040:-1:exon

position:1870465:-1
position: 1870465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1869980-1870374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1869061-1869174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1867897-1868045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1867133-1867289:-1:exon

PDCD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PDCD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 2-like isoform X1
translation: MGDITKEECKFSAKDWCAEADDWGGCDGAESSTCALQMLGLNAGMSSSASGEAQCVSQLQELRLSEAADVSGSLNTDLLLREEMVMATSVPVFHSYYISVVDEADYAGFLDTDHANKLLKEYQQREGVDLEHLMSESFAGEGNNEKYEKSEVRSGDHTFHKFMKRISVCPEQILRYSWGGQPLFISCPPANFGSSIPACSNCGSNRIFEFQLMPALVSMLRGDADLSVEFGTVIVYTCERSCWPTNHQTPLEEFIFVQEDPDQKLFK
SIO_010081: PDCD2L
subclass of: SO_0000673
so part of: PDCD2L
location: complement(join(1867159..1867289,1867897..1868045,1869061..1869174,1869980..1870374,1870476..1870490))
location: region:1867159-1870490:-1
so has part: feature:1870476-1870490:-1:exon
so has part: feature:1869980-1870374:-1:exon
so has part: feature:1869061-1869174:-1:exon
so has part: feature:1867897-1868045:-1:exon
so has part: feature:1867159-1867289:-1:exon

XP_003213809.2
type: Protein
SIO_000068: ncbiprotein

position:1867159:-1
position: 1867159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1870490:-1
position: 1870490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870476-1870490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869980-1870374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1869061-1869174:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1867897-1868045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1867159-1867289:-1:exon

PDCD2L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PDCD2L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 2-like isoform X2
translation: MLGLNAGMSSSASGEAQCVSQLQELRLSEAADVSGSLNTDLLLREEMVMATSVPVFHSYYISVVDEADYAGFLDTDHANKLLKEYQQREGVDLEHLMSESFAGEGNNEKYEKSEVRSGDHTFHKFMKRISVCPEQILRYSWGGQPLFISCPPANFGSSIPACSNCGSNRIFEFQLMPALVSMLRGDADLSVEFGTVIVYTCERSCWPTNHQTPLEEFIFVQEDPDQKLFK
SIO_010081: PDCD2L
subclass of: SO_0000673
so part of: PDCD2L
location: complement(join(1867159..1867289,1867897..1868045,1869061..1869174,1869980..1870278))
location: region:1867159-1870278:-1
so has part: feature:1869980-1870278:-1:exon
so has part: feature:1869061-1869174:-1:exon
so has part: feature:1867897-1868045:-1:exon
so has part: feature:1867159-1867289:-1:exon

XP_031411284.1
type: Protein
SIO_000068: ncbiprotein

position:1870278:-1
position: 1870278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1869980-1870278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1869061-1869174:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1867897-1868045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1867159-1867289:-1:exon

LOC104912917
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1870497..>1877788)
location: region:1870497-1877788:-1
so has part: feature:1870497-1877788:-1:exon
subclass of: SO_0000010

104912917
type: Gene
SIO_000068: ncbigene

position:1870497:-1
position: 1870497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877788:-1
position: 1877788
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870497-1877788:-1:exon

LOC104912917
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912917
product: SUMO-activating enzyme subunit 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555387.1
SIO_010081: LOC104912917
subclass of: SO_0000673
so part of: LOC104912917
location: complement(join(1870497..1870694,1871951..1872072,1874349..1874416,1874927..1875048,1875206..1875306,1875780..1875844,1877010..1877080,1877346..1877429,1877696..>1877788))
location: region:1870497-1877788:-1
so has part: feature:1877696-1877788:-1:exon
so has part: feature:1877346-1877429:-1:exon
so has part: feature:1877010-1877080:-1:exon
so has part: feature:1875780-1875844:-1:exon
so has part: feature:1875206-1875306:-1:exon
so has part: feature:1874927-1875048:-1:exon
so has part: feature:1874349-1874416:-1:exon
so has part: feature:1871951-1872072:-1:exon
so has part: feature:1870497-1870694:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1877696-1877788:-1:exon

position:1877696:-1
position: 1877696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1877346-1877429:-1:exon

position:1877346:-1
position: 1877346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877429:-1
position: 1877429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1877010-1877080:-1:exon

position:1877010:-1
position: 1877010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1877080:-1
position: 1877080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1875780-1875844:-1:exon

position:1875780:-1
position: 1875780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875844:-1
position: 1875844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1875206-1875306:-1:exon

position:1875206:-1
position: 1875206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875306:-1
position: 1875306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1874927-1875048:-1:exon

position:1874927:-1
position: 1874927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875048:-1
position: 1875048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1874349-1874416:-1:exon

position:1874349:-1
position: 1874349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874416:-1
position: 1874416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1871951-1872072:-1:exon

position:1871951:-1
position: 1871951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1872072:-1
position: 1872072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1870497-1870694:-1:exon

position:1870694:-1
position: 1870694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912917
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SUMO-activating enzyme subunit 2-like
translation: CFLTKIFIQQELEESVIDIPPNVLSLHLKIEIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPEANIIAYHDSIMNPDYNVEFFRQFTLVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTVIKKGVTECYECHPKPTQKTFPGCTIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWEPAEAEARARASNEDGEIKRVSTKEWAKSTGYDPVKLFTKCGTVTGSEKYVQAGSLQSCQQQGNGVAARQANSHCIIAPFPQSDVVSCHKCAAVRSKHGYAGTWC
SIO_010081: LOC104912917
subclass of: SO_0000673
so part of: LOC104912917
location: complement(join(1870497..1870694,1871951..1872072,1874349..1874416,1874927..1875048,1875206..1875306,1875780..1875844,1877010..1877080,1877346..1877429,1877696..>1877788))
location: region:1870497-1877788:-1
so has part: feature:1877696-1877788:-1:exon
so has part: feature:1877346-1877429:-1:exon
so has part: feature:1877010-1877080:-1:exon
so has part: feature:1875780-1875844:-1:exon
so has part: feature:1875206-1875306:-1:exon
so has part: feature:1874927-1875048:-1:exon
so has part: feature:1874349-1874416:-1:exon
so has part: feature:1871951-1872072:-1:exon
so has part: feature:1870497-1870694:-1:exon

XP_031411247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1877696-1877788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1877346-1877429:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1877010-1877080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1875780-1875844:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1875206-1875306:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1874927-1875048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1874349-1874416:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1871951-1872072:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1870497-1870694:-1:exon

UBA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: UBA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1885944..1895671)
location: region:1885944-1895671:-1
so has part: feature:1885944-1895671:-1:exon
subclass of: SO_0000010

100543480
type: Gene
SIO_000068: ncbigene

position:1885944:-1
position: 1885944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895671:-1
position: 1895671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1885944-1895671:-1:exon

UBA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: UBA2
product: ubiquitin like modifier activating enzyme 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019619663.2
SIO_010081: UBA2
subclass of: SO_0000673
so part of: UBA2
location: complement(join(1885944..1889715,1891070..1891206,1891940..1892045,1892637..1892733,1893337..1893492,1893965..1894077,1894170..1894263,1895111..1895288,1895529..1895671))
location: region:1885944-1895671:-1
so has part: feature:1895529-1895671:-1:exon
so has part: feature:1895111-1895288:-1:exon
so has part: feature:1894170-1894263:-1:exon
so has part: feature:1893965-1894077:-1:exon
so has part: feature:1893337-1893492:-1:exon
so has part: feature:1892637-1892733:-1:exon
so has part: feature:1891940-1892045:-1:exon
so has part: feature:1891070-1891206:-1:exon
so has part: feature:1885944-1889715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1895529-1895671:-1:exon

position:1895529:-1
position: 1895529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1895111-1895288:-1:exon

position:1895111:-1
position: 1895111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1895288:-1
position: 1895288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1894170-1894263:-1:exon

position:1894170:-1
position: 1894170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1894263:-1
position: 1894263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1893965-1894077:-1:exon

position:1893965:-1
position: 1893965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1894077:-1
position: 1894077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1893337-1893492:-1:exon

position:1893337:-1
position: 1893337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1893492:-1
position: 1893492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1892637-1892733:-1:exon

position:1892637:-1
position: 1892637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1892733:-1
position: 1892733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1891940-1892045:-1:exon

position:1891940:-1
position: 1891940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1892045:-1
position: 1892045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1891070-1891206:-1:exon

position:1891070:-1
position: 1891070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1891206:-1
position: 1891206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1885944-1889715:-1:exon

position:1889715:-1
position: 1889715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UBA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: UBA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SUMO-activating enzyme subunit 2
translation: MEKYEENMALKATKFMEDLSLYEPCPDAPYGRGGRRDLTLHADLEETNFSFPEEKNVPDQQNESSSVLKDQQVLDVKSYAHLFSKSVETLRLHLAEKGDGAELIWDKDDPSAMDFVTSAANLRMHVFSMNMKSRFDIKSMAGNIIPAIATTNAIIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPKKKLLVPCALDPPNPNCYVCASKPEVTVRLNVHKVTVLTLQDKIVKEKFAMVAPDVQIDDGKGTILISSEEGETEANNHRKLSDFGIRNGTRLQADDFLQDYTLLINVLHSEDLEKDVEFEVVGDTPEKVGPKPSEPTSKNITNGSDDGAQPSTSTAPDQDDLFIIDSEDEGHSSNADDTENKSRKRKLEDKECVSTKRVRMEQTEEQDEIIALD
SIO_010081: UBA2
subclass of: SO_0000673
so part of: UBA2
location: complement(join(1889537..1889715,1891070..1891206,1891940..1892045,1892637..1892733,1893337..1893492,1893965..1894077,1894170..1894263,1895111..1895288,1895529..1895671))
location: region:1889537-1895671:-1
so has part: feature:1895529-1895671:-1:exon
so has part: feature:1895111-1895288:-1:exon
so has part: feature:1894170-1894263:-1:exon
so has part: feature:1893965-1894077:-1:exon
so has part: feature:1893337-1893492:-1:exon
so has part: feature:1892637-1892733:-1:exon
so has part: feature:1891940-1892045:-1:exon
so has part: feature:1891070-1891206:-1:exon
so has part: feature:1889537-1889715:-1:exon

XP_019475208.1
type: Protein
SIO_000068: ncbiprotein

position:1889537:-1
position: 1889537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1895529-1895671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1895111-1895288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1894170-1894263:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1893965-1894077:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1893337-1893492:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1892637-1892733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1891940-1892045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1891070-1891206:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1889537-1889715:-1:exon

WTIP
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: WTIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1979179..1993324)
location: region:1979179-1993324:-1
so has part: feature:1979179-1993324:-1:exon
subclass of: SO_0000010

100542858
type: Gene
SIO_000068: ncbigene

position:1979179:-1
position: 1979179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1993324:-1
position: 1993324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1979179-1993324:-1:exon

WTIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: WTIP
product: WT1 interacting protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_031555427.1
SIO_010081: WTIP
subclass of: SO_0000673
so part of: WTIP
location: complement(join(1979179..1982982,1983138..1983308,1985031..1985099,1986976..1987027,1988077..1988207,1990573..1993324))
location: region:1979179-1993324:-1
so has part: feature:1990573-1993324:-1:exon
so has part: feature:1988077-1988207:-1:exon
so has part: feature:1986976-1987027:-1:exon
so has part: feature:1985031-1985099:-1:exon
so has part: feature:1983138-1983308:-1:exon
so has part: feature:1979179-1982982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1990573-1993324:-1:exon

position:1990573:-1
position: 1990573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1988077-1988207:-1:exon

position:1988077:-1
position: 1988077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1988207:-1
position: 1988207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1986976-1987027:-1:exon

position:1986976:-1
position: 1986976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1987027:-1
position: 1987027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1985031-1985099:-1:exon

position:1985031:-1
position: 1985031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985099:-1
position: 1985099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1983138-1983308:-1:exon

position:1983138:-1
position: 1983138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1983308:-1
position: 1983308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1979179-1982982:-1:exon

position:1982982:-1
position: 1982982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WTIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: WTIP
product: WT1 interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 166 samples with support for all annotated introns
transcript id: XM_031555426.1
SIO_010081: WTIP
subclass of: SO_0000673
so part of: WTIP
location: complement(join(1979179..1983308,1985031..1985099,1986976..1987027,1988077..1988207,1990573..1993322))
location: region:1979179-1993322:-1
so has part: feature:1990573-1993322:-1:exon
so has part: feature:1988077-1988207:-1:exon
so has part: feature:1986976-1987027:-1:exon
so has part: feature:1985031-1985099:-1:exon
so has part: feature:1979179-1983308:-1:exon

position:1993322:-1
position: 1993322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1990573-1993322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1988077-1988207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1986976-1987027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1985031-1985099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1979179-1983308:-1:exon

WTIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: WTIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Wilms tumor protein 1-interacting protein
translation: MLIKRKYMAAGLLYSLLSYTAQDRKQHDVYLFLQLKEWLLITPFFLLFQQYSGFQQTADKCFVCGHLIMEMILQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVECYHCEDCGLQLNDEEGHRCYPLEGHLLCHGCHIRRLNIKLPSHPPPSYPMHVTEL
SIO_010081: WTIP
subclass of: SO_0000673
so part of: WTIP
location: complement(join(1983156..1983308,1985031..1985099,1986976..1987027,1988077..1988207,1990573..1990785))
location: region:1983156-1990785:-1
so has part: feature:1990573-1990785:-1:exon
so has part: feature:1988077-1988207:-1:exon
so has part: feature:1986976-1987027:-1:exon
so has part: feature:1985031-1985099:-1:exon
so has part: feature:1983156-1983308:-1:exon

XP_031411286.1
type: Protein
SIO_000068: ncbiprotein

position:1983156:-1
position: 1983156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1990785:-1
position: 1990785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1990573-1990785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1988077-1988207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1986976-1987027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1985031-1985099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1983156-1983308:-1:exon

WTIP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: WTIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Wilms tumor protein 1-interacting protein
translation: MLIKRKYMAAGLLYSLLSYTAQDRKQHDVYLFLQLKEWLLITPFFLLFQQYSGFQQTADKCFVCGHLIMEMILQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVECYHCEDCGLQLNDEEGHRCYPLEGHLLCHGCHIRRLNIKLPSHPPPSYPMHVTEL
SIO_010081: WTIP
subclass of: SO_0000673
so part of: WTIP
location: complement(join(1983156..1983308,1985031..1985099,1986976..1987027,1988077..1988207,1990573..1990785))
location: region:1983156-1990785:-1
so has part: feature:1990573-1990785:-1:exon
so has part: feature:1988077-1988207:-1:exon
so has part: feature:1986976-1987027:-1:exon
so has part: feature:1985031-1985099:-1:exon
so has part: feature:1983156-1983308:-1:exon

XP_031411287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1990573-1990785:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1988077-1988207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1986976-1987027:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1985031-1985099:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1983156-1983308:-1:exon

GPI
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2026127..2041125
location: region:2026127-2041125:1
so has part: feature:2026127-2041125:1:exon
subclass of: SO_0000010

100543322
type: Gene
SIO_000068: ncbigene

position:2026127:1
position: 2026127
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2041125:1
position: 2041125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2026127-2041125:1:exon

GPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GPI
product: glucose-6-phosphate isomerase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010717740.2
SIO_010081: GPI
subclass of: SO_0000673
so part of: GPI
location: join(<2026127..2026234,2027102..2027170,2029780..2029899,2031066..2031149,2031238..2031384,2033082..2033153,2034162..2034206,2034970..2035023,2035996..2036056,2037697..2037740,2037964..2038116,2038466..2038595,2038950..2039026,2040182..2040310,2040854..2040929,2041016..2041125)
location: region:2026127-2041125:1
so has part: feature:2026127-2026234:1:exon
so has part: feature:2027102-2027170:1:exon
so has part: feature:2029780-2029899:1:exon
so has part: feature:2031066-2031149:1:exon
so has part: feature:2031238-2031384:1:exon
so has part: feature:2033082-2033153:1:exon
so has part: feature:2034162-2034206:1:exon
so has part: feature:2034970-2035023:1:exon
so has part: feature:2035996-2036056:1:exon
so has part: feature:2037697-2037740:1:exon
so has part: feature:2037964-2038116:1:exon
so has part: feature:2038466-2038595:1:exon
so has part: feature:2038950-2039026:1:exon
so has part: feature:2040182-2040310:1:exon
so has part: feature:2040854-2040929:1:exon
so has part: feature:2041016-2041125:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2026127-2026234:1:exon

position:2026234:1
position: 2026234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2027102-2027170:1:exon

position:2027102:1
position: 2027102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2027170:1
position: 2027170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2029780-2029899:1:exon

position:2029780:1
position: 2029780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2029899:1
position: 2029899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2031066-2031149:1:exon

position:2031066:1
position: 2031066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2031149:1
position: 2031149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2031238-2031384:1:exon

position:2031238:1
position: 2031238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2031384:1
position: 2031384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2033082-2033153:1:exon

position:2033082:1
position: 2033082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2033153:1
position: 2033153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2034162-2034206:1:exon

position:2034162:1
position: 2034162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2034206:1
position: 2034206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2034970-2035023:1:exon

position:2034970:1
position: 2034970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2035023:1
position: 2035023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2035996-2036056:1:exon

position:2035996:1
position: 2035996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2036056:1
position: 2036056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2037697-2037740:1:exon

position:2037697:1
position: 2037697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037740:1
position: 2037740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2037964-2038116:1:exon

position:2037964:1
position: 2037964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2038116:1
position: 2038116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2038466-2038595:1:exon

position:2038466:1
position: 2038466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2038595:1
position: 2038595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2038950-2039026:1:exon

position:2038950:1
position: 2038950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2039026:1
position: 2039026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2040182-2040310:1:exon

position:2040182:1
position: 2040182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040310:1
position: 2040310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2040854-2040929:1:exon

position:2040854:1
position: 2040854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040929:1
position: 2040929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2041016-2041125:1:exon

position:2041016:1
position: 2041016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glucose-6-phosphate isomerase
translation: NVCFDSLTLNTDHGDILLDYSKNLVTEEVMKMLIELAKSRGVESARERMFSGEKINFTENRAVLHIALRNRSNTPILVDGKDVVPEVNKVLDKMKHFCQKVRSGEWKGYTGKAITDVVNIGIGGSDLGPLMVTEALKPYSKGGPRVWFVSNIDGTHIAKTLAELHPETTLFIIASKTFTTQETITNAVTAKEWFLHAAKDPSAVAKHFVALSTNGPKVKEFGIDTENMFEFWDWVGGRYSLWSAIGLSIALHIGFDNFESLLAGGHWMDKHFHTAPLEKNVPVLLAMLGVWYINCYGCETHALLPYDQYMHRFAAYFQQGDMESNGKYITKKGSRVDYNTGPIVWGEPGTNGQHAFYQLIHQGTRMIPCDFMIPVQTQHPIRNGLHHKILLANFLAQTEALMKGKTADEARKELQAAGLSGDALEKLLPHKVFEGNRPTNSIMFTKLNPFTLGAIIAMYEHKIFVQGVVWDINSYDQWG
SIO_010081: GPI
subclass of: SO_0000673
so part of: GPI
location: join(<2026127..2026234,2027102..2027170,2029780..2029899,2031066..2031149,2031238..2031384,2033082..2033153,2034162..2034206,2034970..2035023,2035996..2036056,2037697..2037740,2037964..2038116,2038466..2038595,2038950..2039026,2040182..2040310,2040854..2040929,2041016..2041086)
location: region:2026127-2041086:1
so has part: feature:2026127-2026234:1:exon
so has part: feature:2027102-2027170:1:exon
so has part: feature:2029780-2029899:1:exon
so has part: feature:2031066-2031149:1:exon
so has part: feature:2031238-2031384:1:exon
so has part: feature:2033082-2033153:1:exon
so has part: feature:2034162-2034206:1:exon
so has part: feature:2034970-2035023:1:exon
so has part: feature:2035996-2036056:1:exon
so has part: feature:2037697-2037740:1:exon
so has part: feature:2037964-2038116:1:exon
so has part: feature:2038466-2038595:1:exon
so has part: feature:2038950-2039026:1:exon
so has part: feature:2040182-2040310:1:exon
so has part: feature:2040854-2040929:1:exon
so has part: feature:2041016-2041086:1:exon

XP_010716042.1
type: Protein
SIO_000068: ncbiprotein

position:2041086:1
position: 2041086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2026127-2026234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2027102-2027170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2029780-2029899:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2031066-2031149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2031238-2031384:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2033082-2033153:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2034162-2034206:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2034970-2035023:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2035996-2036056:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2037697-2037740:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2037964-2038116:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2038466-2038595:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2038950-2039026:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2040182-2040310:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2040854-2040929:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2041016-2041086:1:exon

LOC100542702
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100542702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2095432..2107045)
location: region:2095432-2107045:-1
so has part: feature:2095432-2107045:-1:exon
subclass of: SO_0000010

100542702
type: Gene
SIO_000068: ncbigene

position:2095432:-1
position: 2095432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2107045:-1
position: 2107045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2095432-2107045:-1:exon

LOC100542702
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100542702
product: uncharacterized protein KIAA0355-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 210 samples with support for all annotated introns
transcript id: XM_010717954.2
SIO_010081: LOC100542702
subclass of: SO_0000673
so part of: LOC100542702
location: complement(join(2095432..2095621,2097921..2098906,2099556..2099681,2101162..2101259,2105746..2105904,2106838..2107045))
location: region:2095432-2107045:-1
so has part: feature:2106838-2107045:-1:exon
so has part: feature:2105746-2105904:-1:exon
so has part: feature:2101162-2101259:-1:exon
so has part: feature:2099556-2099681:-1:exon
so has part: feature:2097921-2098906:-1:exon
so has part: feature:2095432-2095621:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2106838-2107045:-1:exon

position:2106838:-1
position: 2106838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2105746-2105904:-1:exon

position:2105746:-1
position: 2105746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105904:-1
position: 2105904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2101162-2101259:-1:exon

position:2101162:-1
position: 2101162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2101259:-1
position: 2101259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2099556-2099681:-1:exon

position:2099556:-1
position: 2099556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2099681:-1
position: 2099681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2097921-2098906:-1:exon

position:2097921:-1
position: 2097921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2098906:-1
position: 2098906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2095432-2095621:-1:exon

position:2095621:-1
position: 2095621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100542702
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100542702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA0355-like
translation: MLQGCCSEAEAQQTGRRQTPPQPIQCELPTVPVQIGPHFLKGISFNESAAENLKLKTHTMLQLIKEAGCHNGLTPRDDSPVTEVLNQVCPSTWRGACKTAVQLLFGQAGLVVVDTAQIENKEAYAPQISLEGSRIVVQVPSTWCLKEDPATMSLLQRSLDPEKTLGLVDVLYTAVFDIPRWKEGREQALPCIQIQLQREISDFGNQVDMPSGNGSKSSGGLQKTFSKLTSRFTKKTSCTSTSNSGSYSIPSTPSKNVFISSSSEEKAKMPTNIDARLQSILNIGNFPRTTDSLQSIQSTNNQIVNGFLVERQDNFFKLDESKDDKGMNLPTDQEMQDVIDFLSGFNMGKSQQTSPMVKRRNSIASSTATEQKSGTVQQQPQSVSHTPLHPSQGLSQQQQSQKQQQQMQYYQHLLQPIGPQQRVPAKWLTNSSQQPAQTVGAGLSHLNQWNNPGFSDLSSDLYSLGLVSSYMDNMMSEMLGQKPQGPRNNTWPNRDQTDGVFGMLGEILPFDPAVGSDPEFARYVAGVNQAMQQKRQAQHVRRPSNTRSNWLLPDDPHKTWPFPEYFTER
SIO_010081: LOC100542702
subclass of: SO_0000673
so part of: LOC100542702
location: complement(join(2095452..2095621,2097921..2098906,2099556..2099681,2101162..2101259,2105746..2105904,2106838..2107008))
location: region:2095452-2107008:-1
so has part: feature:2106838-2107008:-1:exon
so has part: feature:2105746-2105904:-1:exon
so has part: feature:2101162-2101259:-1:exon
so has part: feature:2099556-2099681:-1:exon
so has part: feature:2097921-2098906:-1:exon
so has part: feature:2095452-2095621:-1:exon

XP_010716256.1
type: Protein
SIO_000068: ncbiprotein

position:2095452:-1
position: 2095452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2107008:-1
position: 2107008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2106838-2107008:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2105746-2105904:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2101162-2101259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2099556-2099681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2097921-2098906:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2095452-2095621:-1:exon

LOC104912918
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2107186..2111374)
location: region:2107186-2111374:-1
so has part: feature:2107186-2111374:-1:exon
subclass of: SO_0000010

104912918
type: Gene
SIO_000068: ncbigene

position:2107186:-1
position: 2107186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2111374:-1
position: 2111374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2107186-2111374:-1:exon

LOC104912918
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912918
product: uncharacterized protein KIAA0355-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010717742.3
SIO_010081: LOC104912918
subclass of: SO_0000673
so part of: LOC104912918
location: complement(join(2107186..2108354,2109453..2109531,2111042..2111374))
location: region:2107186-2111374:-1
so has part: feature:2111042-2111374:-1:exon
so has part: feature:2109453-2109531:-1:exon
so has part: feature:2107186-2108354:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2111042-2111374:-1:exon

position:2111042:-1
position: 2111042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2109453-2109531:-1:exon

position:2109453:-1
position: 2109453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2109531:-1
position: 2109531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2107186-2108354:-1:exon

position:2108354:-1
position: 2108354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912918
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912918
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein KIAA0355-like
translation: MFSGPDLVAAVKQRRKHSSGEQEPSTLPSPPLLSAVDDRNQDNKTKTWPPKAPWQHTSSVTNTLPSQSTSLYPMSSPVSQWSDTMQILQSPVWAAANDCAPSTGISSSFAYAQQQQSQQQASQHKQMNKGFKSFPVKHERRPSYLHQY
SIO_010081: LOC104912918
subclass of: SO_0000673
so part of: LOC104912918
location: complement(join(2108031..2108354,2109453..2109531,2111042..2111085))
location: region:2108031-2111085:-1
so has part: feature:2111042-2111085:-1:exon
so has part: feature:2109453-2109531:-1:exon
so has part: feature:2108031-2108354:-1:exon

XP_010716044.1
type: Protein
SIO_000068: ncbiprotein

position:2108031:-1
position: 2108031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2111085:-1
position: 2111085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2111042-2111085:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2109453-2109531:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2108031-2108354:-1:exon

SS18L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SS18L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2112155..2114144
location: region:2112155-2114144:1
so has part: feature:2112155-2114144:1:exon
subclass of: SO_0000010

104913006
type: Gene
SIO_000068: ncbigene

position:2112155:1
position: 2112155
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2114144:1
position: 2114144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2112155-2114144:1:exon

SS18L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SS18L2
product: SS18 like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010717955.3
SIO_010081: SS18L2
subclass of: SO_0000673
so part of: SS18L2
location: join(<2112155..2112249,2112445..2114144)
location: region:2112155-2114144:1
so has part: feature:2112155-2112249:1:exon
so has part: feature:2112445-2114144:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2112155-2112249:1:exon

position:2112249:1
position: 2112249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2112445-2114144:1:exon

position:2112445:1
position: 2112445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SS18L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SS18L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SS18-like protein 2
translation: RQCLLQLLEENDQLIRCIVEYQSKGRATDCVQYQHILHRNLIYLATIADATPPSTQKTTE
SIO_010081: SS18L2
subclass of: SO_0000673
so part of: SS18L2
location: join(<2112155..2112249,2112445..2112532)
location: region:2112155-2112532:1
so has part: feature:2112155-2112249:1:exon
so has part: feature:2112445-2112532:1:exon

XP_010716257.1
type: Protein
SIO_000068: ncbiprotein

position:2112532:1
position: 2112532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2112155-2112249:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2112445-2112532:1:exon

LOC104912919
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2115583..2119905
location: region:2115583-2119905:1
so has part: feature:2115583-2119905:1:exon
subclass of: SO_0000011

104912919
type: Gene
SIO_000068: ncbigene

position:2115583:1
position: 2115583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2119905:1
position: 2119905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2115583-2119905:1:exon

LOC104912919
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912919
product: uncharacterized LOC104912919
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XR_795010.3
SIO_010081: LOC104912919
subclass of: SO_0000673
so part of: LOC104912919
location: join(2115583..2115785,2116568..2116796,2118551..2119905)
location: region:2115583-2119905:1
so has part: feature:2115583-2115785:1:exon
so has part: feature:2116568-2116796:1:exon
so has part: feature:2118551-2119905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2115583-2115785:1:exon

position:2115785:1
position: 2115785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2116568-2116796:1:exon

position:2116568:1
position: 2116568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2116796:1
position: 2116796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2118551-2119905:1:exon

position:2118551:1
position: 2118551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM14A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LSM14A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2124427..2132311
location: region:2124427-2132311:1
so has part: feature:2124427-2132311:1:exon
subclass of: SO_0000010

100544039
type: Gene
SIO_000068: ncbigene

position:2124427:1
position: 2124427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2132311:1
position: 2132311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2124427-2132311:1:exon

LSM14A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LSM14A
product: LSM14A mRNA processing body assembly factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010717743.1
SIO_010081: LSM14A
subclass of: SO_0000673
so part of: LSM14A
location: join(2124427..2124624,2125490..2125622,2127216..2127335,2129072..2129248,2129540..2129602,2130125..2132311)
location: region:2124427-2132311:1
so has part: feature:2124427-2124624:1:exon
so has part: feature:2125490-2125622:1:exon
so has part: feature:2127216-2127335:1:exon
so has part: feature:2129072-2129248:1:exon
so has part: feature:2129540-2129602:1:exon
so has part: feature:2130125-2132311:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2124427-2124624:1:exon

position:2124624:1
position: 2124624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2125490-2125622:1:exon

position:2125490:1
position: 2125490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2125622:1
position: 2125622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2127216-2127335:1:exon

position:2127216:1
position: 2127216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2127335:1
position: 2127335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2129072-2129248:1:exon

position:2129072:1
position: 2129072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2129248:1
position: 2129248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2129540-2129602:1:exon

position:2129540:1
position: 2129540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2129602:1
position: 2129602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2130125-2132311:1:exon

position:2130125:1
position: 2130125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSM14A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LSM14A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LSM14 homolog A
translation: MVSVFAVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSTTSSFQSVGSYGPFGRMPAYSQFSPSPLVGQQFGTVGVGGSLTSFGTDSSGSASMSQSTAVGSAFTTDARALKTQMSQGRSSPQIDHLRRSPTMEQAVQTASAHLPTPAPVGRRSPVPARPMVSASQKSLESQEHRRAEAHKVSRSENELRNENKRQIVPGAPSARRGRGGHRGGRGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKGKPTLVLDLSVGEISISCCSSFVAALGKQLLRSITFKVLFVVVENKPINK
SIO_010081: LSM14A
subclass of: SO_0000673
so part of: LSM14A
location: join(2124442..2124624,2125490..2125622,2127216..2127335,2129072..2129248,2129540..2129602,2130125..2130456)
location: region:2124442-2130456:1
so has part: feature:2124442-2124624:1:exon
so has part: feature:2125490-2125622:1:exon
so has part: feature:2127216-2127335:1:exon
so has part: feature:2129072-2129248:1:exon
so has part: feature:2129540-2129602:1:exon
so has part: feature:2130125-2130456:1:exon

XP_010716045.1
type: Protein
SIO_000068: ncbiprotein

position:2124442:1
position: 2124442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2130456:1
position: 2130456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2124442-2124624:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2125490-2125622:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2127216-2127335:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2129072-2129248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2129540-2129602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2130125-2130456:1:exon

LOC100543167
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100543167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2144467..2173609)
location: region:2144467-2173609:-1
so has part: feature:2144467-2173609:-1:exon
subclass of: SO_0000010

100543167
type: Gene
SIO_000068: ncbigene

position:2144467:-1
position: 2144467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2173609:-1
position: 2173609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2144467-2173609:-1:exon

LOC100543167
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543167
product: transcription initiation factor TFIID subunit 4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555388.1
SIO_010081: LOC100543167
subclass of: SO_0000673
so part of: LOC100543167
location: complement(join(2144467..2144543,2144744..2144916,2153845..2153959,2158124..2158229,2166823..2167080,2168908..2168997,2170471..2170593,2171373..2171600,2172780..2172917,2173571..2173609))
location: region:2144467-2173609:-1
so has part: feature:2173571-2173609:-1:exon
so has part: feature:2172780-2172917:-1:exon
so has part: feature:2171373-2171600:-1:exon
so has part: feature:2170471-2170593:-1:exon
so has part: feature:2168908-2168997:-1:exon
so has part: feature:2166823-2167080:-1:exon
so has part: feature:2158124-2158229:-1:exon
so has part: feature:2153845-2153959:-1:exon
so has part: feature:2144744-2144916:-1:exon
so has part: feature:2144467-2144543:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2173571-2173609:-1:exon

position:2173571:-1
position: 2173571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2172780-2172917:-1:exon

position:2172780:-1
position: 2172780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2172917:-1
position: 2172917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2171373-2171600:-1:exon

position:2171373:-1
position: 2171373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2171600:-1
position: 2171600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2170471-2170593:-1:exon

position:2170471:-1
position: 2170471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2170593:-1
position: 2170593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2168908-2168997:-1:exon

position:2168908:-1
position: 2168908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2168997:-1
position: 2168997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2166823-2167080:-1:exon

position:2166823:-1
position: 2166823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2167080:-1
position: 2167080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2158124-2158229:-1:exon

position:2158124:-1
position: 2158124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2158229:-1
position: 2158229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2153845-2153959:-1:exon

position:2153845:-1
position: 2153845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2153959:-1
position: 2153959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2144744-2144916:-1:exon

position:2144744:-1
position: 2144744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2144916:-1
position: 2144916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2144467-2144543:-1:exon

position:2144543:-1
position: 2144543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100543167
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543167
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 4-like
translation: MNYLSDTAYQKEKQPTSVATSTVRLGLPVQAKVVQSTATPVSATAAATLPGGSILSHTTVSVATTNAQNLFKTTVSTGTPTSQQPAVITGGQTQTAAQNQSQPRLPLPPHTTAQVPAQPQVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIDPEEFTGRLQSELKSSPQPYLVPFLKKSLPALRQSLLNSQHSVLQGQPSQQLLQQTKLSQVIPQSASGSISSIVTTQTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQIIQSTSAQTVKRNPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGGFGVQVSANQKNKLNDPGGGSFRHGLGAHGCWTTCDGASAGSSPGADAGSSADTGTRSYQHFTSTFSAHKWPSFSPNNSSEKSTLQAFSRAFLGCEFIGGQKAQS
SIO_010081: LOC100543167
subclass of: SO_0000673
so part of: LOC100543167
location: complement(join(2144467..2144543,2144744..2144916,2153845..2153959,2158124..2158229,2166823..2167080,2168908..2168997,2170471..2170593,2171373..2171600,2172780..2172917,2173571..2173609))
location: region:2144467-2173609:-1
so has part: feature:2173571-2173609:-1:exon
so has part: feature:2172780-2172917:-1:exon
so has part: feature:2171373-2171600:-1:exon
so has part: feature:2170471-2170593:-1:exon
so has part: feature:2168908-2168997:-1:exon
so has part: feature:2166823-2167080:-1:exon
so has part: feature:2158124-2158229:-1:exon
so has part: feature:2153845-2153959:-1:exon
so has part: feature:2144744-2144916:-1:exon
so has part: feature:2144467-2144543:-1:exon

XP_031411248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2173571-2173609:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2172780-2172917:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2171373-2171600:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2170471-2170593:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2168908-2168997:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2166823-2167080:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2158124-2158229:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2153845-2153959:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2144744-2144916:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2144467-2144543:-1:exon

LOC109369753
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369753
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2185467..2195583)
location: region:2185467-2195583:-1
so has part: feature:2185467-2195583:-1:exon
subclass of: SO_0000011

109369753
type: Gene
SIO_000068: ncbigene

position:2185467:-1
position: 2185467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2195583:-1
position: 2195583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2185467-2195583:-1:exon

LOC109369753
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369753
product: uncharacterized LOC109369753
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_002119189.2
SIO_010081: LOC109369753
subclass of: SO_0000673
so part of: LOC109369753
location: complement(join(2185467..2188844,2189231..2189330,2195418..2195583))
location: region:2185467-2195583:-1
so has part: feature:2195418-2195583:-1:exon
so has part: feature:2189231-2189330:-1:exon
so has part: feature:2185467-2188844:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2195418-2195583:-1:exon

position:2195418:-1
position: 2195418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2189231-2189330:-1:exon

position:2189231:-1
position: 2189231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2189330:-1
position: 2189330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2185467-2188844:-1:exon

position:2188844:-1
position: 2188844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KCTD15
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2208329..2287516
location: region:2208329-2287516:1
so has part: feature:2208329-2287516:1:exon
subclass of: SO_0000010

100543012
type: Gene
SIO_000068: ncbigene

position:2208329:1
position: 2208329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2287516:1
position: 2287516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2208329-2287516:1:exon

KCTD15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KCTD15
product: potassium channel tetramerization domain containing 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555389.1
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2208329..2208338,2270869..2271056,2277674..2277979,2283585..2287516)
location: region:2208329-2287516:1
so has part: feature:2208329-2208338:1:exon
so has part: feature:2270869-2271056:1:exon
so has part: feature:2277674-2277979:1:exon
so has part: feature:2283585-2287516:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2208329-2208338:1:exon

position:2208338:1
position: 2208338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2270869-2271056:1:exon

position:2270869:1
position: 2270869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2271056:1
position: 2271056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2277674-2277979:1:exon

position:2277674:1
position: 2277674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2277979:1
position: 2277979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2283585-2287516:1:exon

position:2283585:1
position: 2283585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KCTD15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KCTD15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BTB/POZ domain-containing protein KCTD15
translation: MGKDFVSFAHFFFLFFSVISRLFNGTEPIVLDSLKQHYFIDRDGEIFRYILSFLRTSKLLLPEDFKDFNLLYEEAKYYQLQPMIKELERWKQEKEQRKHFQPCDCLVVRVTPDLGERIALSGEKALIEEIFPETGDVMCNSVNAGWNQDPTHVIRFPLNGYCRLNSVQVLERLFQKGFNMAASCGGGVDSSQFSEYVLCREDRRPQPTPTIRIKQEPLD
SIO_010081: KCTD15
subclass of: SO_0000673
so part of: KCTD15
location: join(2208329..2208338,2270869..2271056,2277674..2277979,2283585..2283740)
location: region:2208329-2283740:1
so has part: feature:2208329-2208338:1:exon
so has part: feature:2270869-2271056:1:exon
so has part: feature:2277674-2277979:1:exon
so has part: feature:2283585-2283740:1:exon

XP_031411249.1
type: Protein
SIO_000068: ncbiprotein

position:2283740:1
position: 2283740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2208329-2208338:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2270869-2271056:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2277674-2277979:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2283585-2283740:1:exon

CHST8
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CHST8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2326894..2347655
location: region:2326894-2347655:1
so has part: feature:2326894-2347655:1:exon
subclass of: SO_0000010

100543787
type: Gene
SIO_000068: ncbigene

position:2326894:1
position: 2326894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2347655:1
position: 2347655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2326894-2347655:1:exon

CHST8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CHST8
product: carbohydrate sulfotransferase 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555390.1
SIO_010081: CHST8
subclass of: SO_0000673
so part of: CHST8
location: join(2326894..2326906,2340472..2340509,2342545..2347655)
location: region:2326894-2347655:1
so has part: feature:2326894-2326906:1:exon
so has part: feature:2340472-2340509:1:exon
so has part: feature:2342545-2347655:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2326894-2326906:1:exon

position:2326906:1
position: 2326906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2340472-2340509:1:exon

position:2340472:1
position: 2340472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340509:1
position: 2340509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2342545-2347655:1:exon

position:2342545:1
position: 2342545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHST8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CHST8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 8
translation: MNHAGIKYNMGLQQPKKDCISSNNQDRRLRKSTADGVATVKLSGSLHPSENVPSKLQSIDRRQSSTMFMKDYQEKGEETNSMRLHKRRRRFVIKKSPILISTNSSTLNLPTIKSDDRNNKWKSLYQIQSKRKQIMKETCSKYKSNNRRIITPYHVSRIFVEDKYRVLYCEVPKAGCSNWKRVLMVLNGLASSTKDIQHNTVHYGNYLKRLDGFDRKGIYHRLNTYTKMLFIREPFEKLVSAFRDKFEHPNNYYHPVFGKAIISRYRVNATKEALRTGSGVKFKEFIQYLLDVHRPVGMDIHWDHVNRLCSPCLIDYDFVGKFESMEEDANFFLHLIGAPQNLTFPKFKDRHSNEERTTTKITQQYFAQLSPSQRQQSYDFYYMDYLMFNYSKPFEDLY
SIO_010081: CHST8
subclass of: SO_0000673
so part of: CHST8
location: join(2326894..2326906,2340472..2340509,2342545..2343690)
location: region:2326894-2343690:1
so has part: feature:2326894-2326906:1:exon
so has part: feature:2340472-2340509:1:exon
so has part: feature:2342545-2343690:1:exon

XP_031411250.1
type: Protein
SIO_000068: ncbiprotein

position:2343690:1
position: 2343690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2326894-2326906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2340472-2340509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2342545-2343690:1:exon

LOC109369754
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369754
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2564851..2569341)
location: region:2564851-2569341:-1
so has part: feature:2564851-2569341:-1:exon
subclass of: SO_0000011

109369754
type: Gene
SIO_000068: ncbigene

position:2564851:-1
position: 2564851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2569341:-1
position: 2569341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2564851-2569341:-1:exon

LOC109369754
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369754
product: uncharacterized LOC109369754
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002119190.1
SIO_010081: LOC109369754
subclass of: SO_0000673
so part of: LOC109369754
location: complement(join(2564851..2567112,2568044..2568091,2568264..2569341))
location: region:2564851-2569341:-1
so has part: feature:2568264-2569341:-1:exon
so has part: feature:2568044-2568091:-1:exon
so has part: feature:2564851-2567112:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2568264-2569341:-1:exon

position:2568264:-1
position: 2568264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2568044-2568091:-1:exon

position:2568044:-1
position: 2568044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2568091:-1
position: 2568091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2564851-2567112:-1:exon

position:2567112:-1
position: 2567112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109369755
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2614949..2624041)
location: region:2614949-2624041:-1
so has part: feature:2614949-2624041:-1:exon
subclass of: SO_0000011

109369755
type: Gene
SIO_000068: ncbigene

position:2614949:-1
position: 2614949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624041:-1
position: 2624041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2614949-2624041:-1:exon

LOC109369755
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369755
product: uncharacterized LOC109369755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XR_002119192.1
SIO_010081: LOC109369755
subclass of: SO_0000673
so part of: LOC109369755
location: complement(join(2614949..2615052,2616272..2616347,2624027..2624041))
location: region:2614949-2624041:-1
so has part: feature:2624027-2624041:-1:exon
so has part: feature:2616272-2616347:-1:exon
so has part: feature:2614949-2615052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2624027-2624041:-1:exon

position:2624027:-1
position: 2624027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2616272-2616347:-1:exon

position:2616272:-1
position: 2616272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2616347:-1
position: 2616347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2614949-2615052:-1:exon

position:2615052:-1
position: 2615052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CEBPG
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CEBPG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2617560..2622294
location: region:2617560-2622294:1
so has part: feature:2617560-2622294:1:exon
subclass of: SO_0000010

100540858
type: Gene
SIO_000068: ncbigene

position:2617560:1
position: 2617560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2622294:1
position: 2622294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2617560-2622294:1:exon

CEBPG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CEBPG
product: CCAAT enhancer binding protein gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_010717745.3
SIO_010081: CEBPG
subclass of: SO_0000673
so part of: CEBPG
location: join(2617560..2619176,2620152..2622294)
location: region:2617560-2622294:1
so has part: feature:2617560-2619176:1:exon
so has part: feature:2620152-2622294:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2617560-2619176:1:exon

position:2619176:1
position: 2619176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2620152-2622294:1:exon

position:2620152:1
position: 2620152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217128
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2618576..2624018)
location: region:2618576-2624018:-1
so has part: feature:2618576-2624018:-1:exon
subclass of: SO_0000011

116217128
type: Gene
SIO_000068: ncbigene

position:2618576:-1
position: 2618576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2624018:-1
position: 2624018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2618576-2624018:-1:exon

LOC116217128
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217128
product: uncharacterized LOC116217128
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_004161163.1
SIO_010081: LOC116217128
subclass of: SO_0000673
so part of: LOC116217128
location: complement(join(2618576..2618662,2619436..2619562,2623239..2624018))
location: region:2618576-2624018:-1
so has part: feature:2623239-2624018:-1:exon
so has part: feature:2619436-2619562:-1:exon
so has part: feature:2618576-2618662:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2623239-2624018:-1:exon

position:2623239:-1
position: 2623239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2619436-2619562:-1:exon

position:2619436:-1
position: 2619436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2619562:-1
position: 2619562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2618576-2618662:-1:exon

position:2618662:-1
position: 2618662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CEBPG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CEBPG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CCAAT/enhancer-binding protein gamma
translation: MSKTSPQNTATDANGVSVIHTQAHSSGLQQVPQLVPVSPGGGGKAVPPSKQGKKNSFVDRNSDEYRQRRERNNMAVKKSRLKSKQKAQDTLQRVTQLKEENERLEAKIKLLTKELSVLKDLFLEHAHSLADNVQPVGTESSTTNPESSGQ
SIO_010081: CEBPG
subclass of: SO_0000673
so part of: CEBPG
location: 2620255..2620707
location: region:2620255-2620707:1
so has part: feature:2620255-2620707:1:exon

XP_010716047.3
type: Protein
SIO_000068: ncbiprotein

position:2620255:1
position: 2620255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2620707:1
position: 2620707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2620255-2620707:1:exon

PEPD
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PEPD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2625667..2680055)
location: region:2625667-2680055:-1
so has part: feature:2625667-2680055:-1:exon
subclass of: SO_0000010

104909255
type: Gene
SIO_000068: ncbigene

position:2625667:-1
position: 2625667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2680055:-1
position: 2680055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2625667-2680055:-1:exon

PEPD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PEPD
product: peptidase D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_019619726.1
SIO_010081: PEPD
subclass of: SO_0000673
so part of: PEPD
location: complement(join(2625667..2626310,2633349..2633540,2644062..2644246,2658408..2658556,2673832..2673909,2679963..2680055))
location: region:2625667-2680055:-1
so has part: feature:2679963-2680055:-1:exon
so has part: feature:2673832-2673909:-1:exon
so has part: feature:2658408-2658556:-1:exon
so has part: feature:2644062-2644246:-1:exon
so has part: feature:2633349-2633540:-1:exon
so has part: feature:2625667-2626310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2679963-2680055:-1:exon

position:2679963:-1
position: 2679963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2673832-2673909:-1:exon

position:2673832:-1
position: 2673832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2673909:-1
position: 2673909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2658408-2658556:-1:exon

position:2658408:-1
position: 2658408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2658556:-1
position: 2658556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2644062-2644246:-1:exon

position:2644062:-1
position: 2644062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2644246:-1
position: 2644246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2633349-2633540:-1:exon

position:2633349:-1
position: 2633349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2633540:-1
position: 2633540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2625667-2626310:-1:exon

position:2626310:-1
position: 2626310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PEPD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PEPD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: xaa-Pro dipeptidase
translation: MRHTSYTCICGSGENSSVLHYGHAGAPNDKTIEDGDLCLFDMGGEYYCYGSDITCTFPANGKFTPDQRAIYEAVLKSSRAVMKAVKPGVAWPDMHRLADRVHLEELTKIGILKGNVDDMVKVHLGAIFMPHGLGHLLGIDVHDVGGYPEGVERIDLPGLRSLRTARNLEQGMVLTIEPGIYFINHLLDQALRDPAQSCFINNDVLQRFRGFGGVRIEDDIAVTASGMELLTCVPRTVEEIEAFMAEGQGSAKSFGSLSSQKE
SIO_010081: PEPD
subclass of: SO_0000673
so part of: PEPD
location: complement(join(2626161..2626310,2633349..2633540,2644062..2644246,2658408..2658556,2673832..2673909,2679963..2679997))
location: region:2626161-2679997:-1
so has part: feature:2679963-2679997:-1:exon
so has part: feature:2673832-2673909:-1:exon
so has part: feature:2658408-2658556:-1:exon
so has part: feature:2644062-2644246:-1:exon
so has part: feature:2633349-2633540:-1:exon
so has part: feature:2626161-2626310:-1:exon

XP_019475271.1
type: Protein
SIO_000068: ncbiprotein

position:2626161:-1
position: 2626161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2679997:-1
position: 2679997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2679963-2679997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2673832-2673909:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2658408-2658556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2644062-2644246:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2633349-2633540:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2626161-2626310:-1:exon

LOC109369756
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369756
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2697670..2709871)
location: region:2697670-2709871:-1
so has part: feature:2697670-2709871:-1:exon
subclass of: SO_0000011

109369756
type: Gene
SIO_000068: ncbigene

position:2697670:-1
position: 2697670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2709871:-1
position: 2709871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2697670-2709871:-1:exon

LOC109369756
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369756
product: uncharacterized LOC109369756
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002119193.2
SIO_010081: LOC109369756
subclass of: SO_0000673
so part of: LOC109369756
location: complement(join(2697670..2699103,2706126..2706214,2709343..2709405,2709507..2709871))
location: region:2697670-2709871:-1
so has part: feature:2709507-2709871:-1:exon
so has part: feature:2709343-2709405:-1:exon
so has part: feature:2706126-2706214:-1:exon
so has part: feature:2697670-2699103:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2709507-2709871:-1:exon

position:2709507:-1
position: 2709507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2709343-2709405:-1:exon

position:2709343:-1
position: 2709343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2709405:-1
position: 2709405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2706126-2706214:-1:exon

position:2706126:-1
position: 2706126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2706214:-1
position: 2706214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2697670-2699103:-1:exon

position:2699103:-1
position: 2699103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912922
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912922
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2711498..2716811)
location: region:2711498-2716811:-1
so has part: feature:2711498-2716811:-1:exon
subclass of: SO_0000011

104912922
type: Gene
SIO_000068: ncbigene

position:2711498:-1
position: 2711498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2716811:-1
position: 2716811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2711498-2716811:-1:exon

LOC104912922
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912922
product: uncharacterized LOC104912922, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_002119194.2
SIO_010081: LOC104912922
subclass of: SO_0000673
so part of: LOC104912922
location: complement(join(2711498..2713251,2714977..2715138,2715538..2715620,2715760..2716811))
location: region:2711498-2716811:-1
so has part: feature:2715760-2716811:-1:exon
so has part: feature:2715538-2715620:-1:exon
so has part: feature:2714977-2715138:-1:exon
so has part: feature:2711498-2713251:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2715760-2716811:-1:exon

position:2715760:-1
position: 2715760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2715538-2715620:-1:exon

position:2715538:-1
position: 2715538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2715620:-1
position: 2715620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2714977-2715138:-1:exon

position:2714977:-1
position: 2714977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2715138:-1
position: 2715138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2711498-2713251:-1:exon

position:2713251:-1
position: 2713251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912922
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912922
product: uncharacterized LOC104912922, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XR_795013.3
SIO_010081: LOC104912922
subclass of: SO_0000673
so part of: LOC104912922
location: complement(join(2712757..2713251,2715538..2715620,2715760..2716805))
location: region:2712757-2716805:-1
so has part: feature:2715760-2716805:-1:exon
so has part: feature:2715538-2715620:-1:exon
so has part: feature:2712757-2713251:-1:exon

position:2712757:-1
position: 2712757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2716805:-1
position: 2716805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2715760-2716805:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2715538-2715620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2712757-2713251:-1:exon

LOC104912924
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912924
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2734597..2766222
location: region:2734597-2766222:1
so has part: feature:2734597-2766222:1:exon
subclass of: SO_0000011

104912924
type: Gene
SIO_000068: ncbigene

position:2734597:1
position: 2734597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2766222:1
position: 2766222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2734597-2766222:1:exon

LOC104912924
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912924
product: uncharacterized LOC104912924, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004161167.1
SIO_010081: LOC104912924
subclass of: SO_0000673
so part of: LOC104912924
location: join(2734597..2739244,2748908..2749110,2757890..2757968,2760119..2760253,2761660..2762345)
location: region:2734597-2762345:1
so has part: feature:2734597-2739244:1:exon
so has part: feature:2748908-2749110:1:exon
so has part: feature:2757890-2757968:1:exon
so has part: feature:2760119-2760253:1:exon
so has part: feature:2761660-2762345:1:exon

position:2762345:1
position: 2762345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2734597-2739244:1:exon

position:2739244:1
position: 2739244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2748908-2749110:1:exon

position:2748908:1
position: 2748908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2749110:1
position: 2749110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2757890-2757968:1:exon

position:2757890:1
position: 2757890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2757968:1
position: 2757968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2760119-2760253:1:exon

position:2760119:1
position: 2760119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2760253:1
position: 2760253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2761660-2762345:1:exon

position:2761660:1
position: 2761660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912924
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912924
product: uncharacterized LOC104912924, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004161168.1
SIO_010081: LOC104912924
subclass of: SO_0000673
so part of: LOC104912924
location: join(2739252..2746843,2748908..2749110,2757890..2757968,2760119..2760253,2761660..2762232,2766140..2766222)
location: region:2739252-2766222:1
so has part: feature:2739252-2746843:1:exon
so has part: feature:2748908-2749110:1:exon
so has part: feature:2757890-2757968:1:exon
so has part: feature:2760119-2760253:1:exon
so has part: feature:2761660-2762232:1:exon
so has part: feature:2766140-2766222:1:exon

position:2739252:1
position: 2739252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2739252-2746843:1:exon

position:2746843:1
position: 2746843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2748908-2749110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757890-2757968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760119-2760253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2761660-2762232:1:exon

position:2762232:1
position: 2762232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2766140-2766222:1:exon

position:2766140:1
position: 2766140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912924
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912924
product: uncharacterized LOC104912924, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004161166.1
SIO_010081: LOC104912924
subclass of: SO_0000673
so part of: LOC104912924
location: join(2739252..2746843,2748908..2749178,2757890..2757968,2760119..2760253,2761660..2762345)
location: region:2739252-2762345:1
so has part: feature:2739252-2746843:1:exon
so has part: feature:2748908-2749178:1:exon
so has part: feature:2757890-2757968:1:exon
so has part: feature:2760119-2760253:1:exon
so has part: feature:2761660-2762345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2739252-2746843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2748908-2749178:1:exon

position:2749178:1
position: 2749178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2757890-2757968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760119-2760253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2761660-2762345:1:exon

LOC104912924
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912924
product: uncharacterized LOC104912924, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004161164.1
SIO_010081: LOC104912924
subclass of: SO_0000673
so part of: LOC104912924
location: join(2739252..2746843,2748908..2749110,2757890..2757968,2760119..2760253,2761660..2762344)
location: region:2739252-2762344:1
so has part: feature:2739252-2746843:1:exon
so has part: feature:2748908-2749110:1:exon
so has part: feature:2757890-2757968:1:exon
so has part: feature:2760119-2760253:1:exon
so has part: feature:2761660-2762344:1:exon

position:2762344:1
position: 2762344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2739252-2746843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2748908-2749110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757890-2757968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760119-2760253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2761660-2762344:1:exon

LOC104912924
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912924
product: uncharacterized LOC104912924, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004161165.1
SIO_010081: LOC104912924
subclass of: SO_0000673
so part of: LOC104912924
location: join(2739252..2746843,2748908..2749110,2757890..2757968,2760119..2760253,2761660..2761903,2762141..2762342)
location: region:2739252-2762342:1
so has part: feature:2739252-2746843:1:exon
so has part: feature:2748908-2749110:1:exon
so has part: feature:2757890-2757968:1:exon
so has part: feature:2760119-2760253:1:exon
so has part: feature:2761660-2761903:1:exon
so has part: feature:2762141-2762342:1:exon

position:2762342:1
position: 2762342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2739252-2746843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2748908-2749110:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2757890-2757968:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2760119-2760253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2761660-2761903:1:exon

position:2761903:1
position: 2761903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2762141-2762342:1:exon

position:2762141:1
position: 2762141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912923
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912923
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2766168..2777093)
location: region:2766168-2777093:-1
so has part: feature:2766168-2777093:-1:exon
subclass of: SO_0000011

104912923
type: Gene
SIO_000068: ncbigene

position:2766168:-1
position: 2766168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2777093:-1
position: 2777093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2766168-2777093:-1:exon

LOC104912923
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912923
product: uncharacterized LOC104912923
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002119206.2
SIO_010081: LOC104912923
subclass of: SO_0000673
so part of: LOC104912923
location: complement(join(2766168..2766253,2768596..2770547,2773934..2774039,2776531..2777093))
location: region:2766168-2777093:-1
so has part: feature:2776531-2777093:-1:exon
so has part: feature:2773934-2774039:-1:exon
so has part: feature:2768596-2770547:-1:exon
so has part: feature:2766168-2766253:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2776531-2777093:-1:exon

position:2776531:-1
position: 2776531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2773934-2774039:-1:exon

position:2773934:-1
position: 2773934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2774039:-1
position: 2774039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2768596-2770547:-1:exon

position:2768596:-1
position: 2768596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2770547:-1
position: 2770547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2766168-2766253:-1:exon

position:2766253:-1
position: 2766253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912925
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912925
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2835060..2838389
location: region:2835060-2838389:1
so has part: feature:2835060-2838389:1:exon
subclass of: SO_0000011

104912925
type: Gene
SIO_000068: ncbigene

position:2835060:1
position: 2835060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2838389:1
position: 2838389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2835060-2838389:1:exon

LOC104912925
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912925
product: uncharacterized LOC104912925
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004161145.1
SIO_010081: LOC104912925
subclass of: SO_0000673
so part of: LOC104912925
location: join(2835060..2835335,2835725..2835798,2838215..2838389)
location: region:2835060-2838389:1
so has part: feature:2835060-2835335:1:exon
so has part: feature:2835725-2835798:1:exon
so has part: feature:2838215-2838389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2835060-2835335:1:exon

position:2835335:1
position: 2835335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2835725-2835798:1:exon

position:2835725:1
position: 2835725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2835798:1
position: 2835798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2838215-2838389:1:exon

position:2838215:1
position: 2838215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912926
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2885198..2890547
location: region:2885198-2890547:1
so has part: feature:2885198-2890547:1:exon
subclass of: SO_0000010

104912926
type: Gene
SIO_000068: ncbigene

position:2885198:1
position: 2885198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2890547:1
position: 2890547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2885198-2890547:1:exon

LOC104912926
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912926
product: low-density lipoprotein receptor-related protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_010717746.3
SIO_010081: LOC104912926
subclass of: SO_0000673
so part of: LOC104912926
location: join(2885198..2885360,2886211..2890547)
location: region:2885198-2890547:1
so has part: feature:2885198-2885360:1:exon
so has part: feature:2886211-2890547:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2885198-2885360:1:exon

position:2885360:1
position: 2885360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2886211-2890547:1:exon

position:2886211:1
position: 2886211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912926
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912926
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor-related protein 3-like
translation: MTRLEAEFVRREAPPSYGQLIAQGLIPPVEDFPVYNASQASVLQNIRTAMRRQMRRHSSRRSSSRRRLGRLWNRLFHRPRVRGQIPLLTPARTSQTTLGDGIINHADGTIRSPPPSPEGPSLEADTHASDLQEAGCSTLQPETEITEPLPSNVLENTCTAAQAEPESGHADKSVGAETSGSELKQPNKVDSGKSFRDPLSESVTEAIHGGSAPRRTVPEGSNLSRSHPPSEEPCRLPLKKWESAYSDSPLNVHIQVDGQNRCCPSSHREEPLGIHAACCHSVEVPMLESSAPLSEISTSDDESLLVC
SIO_010081: LOC104912926
subclass of: SO_0000673
so part of: LOC104912926
location: join(2885244..2885360,2886211..2887017)
location: region:2885244-2887017:1
so has part: feature:2885244-2885360:1:exon
so has part: feature:2886211-2887017:1:exon

XP_010716048.1
type: Protein
SIO_000068: ncbiprotein

position:2885244:1
position: 2885244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2887017:1
position: 2887017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2885244-2885360:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2886211-2887017:1:exon

SLC7A10
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC7A10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2894613..2909843)
location: region:2894613-2909843:-1
so has part: feature:2894613-2909843:-1:exon
subclass of: SO_0000010

100542544
type: Gene
SIO_000068: ncbigene

position:2894613:-1
position: 2894613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2909843:-1
position: 2909843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2894613-2909843:-1:exon

SLC7A10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC7A10
product: solute carrier family 7 member 10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_031555428.1
SIO_010081: SLC7A10
subclass of: SO_0000673
so part of: SLC7A10
location: complement(join(2894613..2895341,2896312..2896489,2896828..2896977,2899901..2899997,2901090..2901193,2901289..2901412,2902782..2902935,2904112..2904237,2904877..2905028,2909338..2909843))
location: region:2894613-2909843:-1
so has part: feature:2909338-2909843:-1:exon
so has part: feature:2904877-2905028:-1:exon
so has part: feature:2904112-2904237:-1:exon
so has part: feature:2902782-2902935:-1:exon
so has part: feature:2901289-2901412:-1:exon
so has part: feature:2901090-2901193:-1:exon
so has part: feature:2899901-2899997:-1:exon
so has part: feature:2896828-2896977:-1:exon
so has part: feature:2896312-2896489:-1:exon
so has part: feature:2894613-2895341:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2909338-2909843:-1:exon

position:2909338:-1
position: 2909338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2904877-2905028:-1:exon

position:2904877:-1
position: 2904877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2905028:-1
position: 2905028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2904112-2904237:-1:exon

position:2904112:-1
position: 2904112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2904237:-1
position: 2904237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2902782-2902935:-1:exon

position:2902782:-1
position: 2902782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2902935:-1
position: 2902935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2901289-2901412:-1:exon

position:2901289:-1
position: 2901289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901412:-1
position: 2901412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2901090-2901193:-1:exon

position:2901090:-1
position: 2901090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2901193:-1
position: 2901193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2899901-2899997:-1:exon

position:2899901:-1
position: 2899901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2899997:-1
position: 2899997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2896828-2896977:-1:exon

position:2896828:-1
position: 2896828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2896977:-1
position: 2896977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2896312-2896489:-1:exon

position:2896312:-1
position: 2896312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2896489:-1
position: 2896489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2894613-2895341:-1:exon

position:2895341:-1
position: 2895341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC7A10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC7A10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: asc-type amino acid transporter 1
translation: MFNRSLKCLSRSKCLTCLISDQWRLSLGLNQIKYKQAKPGEEGLGQGRGTGWIYLLLKNKVNFSFTYPTANFLSLSGNIIGSGIFISPKGVLEHTGSVGLALIIWVLGGGVAALGSLCYAELGVTIPKSGGDYSYVTEIFGGLAGFLLLWSAVLIMYPTSLAVISLTFSNYVLQPVFPNCIPPYNASRILSMVCLLLLTWVNSSSVRWATRIQDIFTAGKLLALALIITVGFIQIFKGNYEELTPSKAFNFWMTPSVGHLALAFLQGSFAFSGWNFLNYVTEELVDPRRNLPRAIFISIPLVTFVYTFTNIAYFTAMSPQELLSSNAVAVTFGEKLLGYFSWVMPVSVALSTFGGINGYLFTSSRLCFSGAREGHLPSLLAMIHVKYCTPIPALLVCCLATLIIMLVGDTYTLINYVSFINYLCYGVTIIGLIVLRWKKPKIFRPIKVNLLIPVTYLAFWAFLLVFSLYSEPVVCGVGLIIILTGVPVFFLGVYWRNKPKCVNRLIESVTCWGQKLCFVVYPQGGAAEEPAAHCHLPASDKSPRK
SIO_010081: SLC7A10
subclass of: SO_0000673
so part of: SLC7A10
location: complement(join(2895223..2895341,2896312..2896489,2896828..2896977,2899901..2899997,2901090..2901193,2901289..2901412,2902782..2902935,2904112..2904237,2904877..2905028,2909338..2909771))
location: region:2895223-2909771:-1
so has part: feature:2909338-2909771:-1:exon
so has part: feature:2904877-2905028:-1:exon
so has part: feature:2904112-2904237:-1:exon
so has part: feature:2902782-2902935:-1:exon
so has part: feature:2901289-2901412:-1:exon
so has part: feature:2901090-2901193:-1:exon
so has part: feature:2899901-2899997:-1:exon
so has part: feature:2896828-2896977:-1:exon
so has part: feature:2896312-2896489:-1:exon
so has part: feature:2895223-2895341:-1:exon

XP_031411288.1
type: Protein
SIO_000068: ncbiprotein

position:2895223:-1
position: 2895223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2909771:-1
position: 2909771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2909338-2909771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2904877-2905028:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2904112-2904237:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2902782-2902935:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2901289-2901412:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2901090-2901193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2899901-2899997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2896828-2896977:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2896312-2896489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2895223-2895341:-1:exon

LRP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LRP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2931266..2947217
location: region:2931266-2947217:1
so has part: feature:2931266-2947217:1:exon
subclass of: SO_0000010

100540705
type: Gene
SIO_000068: ncbigene

position:2931266:1
position: 2931266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2947217:1
position: 2947217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2931266-2947217:1:exon

LRP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LRP3
product: LDL receptor related protein 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 203 samples with support for all annotated introns
transcript id: XM_031555429.1
SIO_010081: LRP3
subclass of: SO_0000673
so part of: LRP3
location: join(2931266..2931389,2937539..2937677,2944968..2945176,2945456..2947217)
location: region:2931266-2947217:1
so has part: feature:2931266-2931389:1:exon
so has part: feature:2937539-2937677:1:exon
so has part: feature:2944968-2945176:1:exon
so has part: feature:2945456-2947217:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2931266-2931389:1:exon

position:2931389:1
position: 2931389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2937539-2937677:1:exon

position:2937539:1
position: 2937539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2937677:1
position: 2937677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2944968-2945176:1:exon

position:2944968:1
position: 2944968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2945176:1
position: 2945176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2945456-2947217:1:exon

position:2945456:1
position: 2945456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LRP3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 3
translation: MNCLAVPLEPMVMFFLFIFTVNLFLTGKIESAVTSLVACSGELEQHTERRGVIYSPSWPRNYPPAVNCSWYIQGDRGDMITISFKNFDLEESQKCAVDWLMIGPSSKREEYKVCGSSIPPSFISARDHVWIFFHSDASSSGQSQGFRLSYIRGKIGQAACQSDEFHCANGKCIPSTWKCNSMDECGDNSDERNCTVPPTEPPSSICPSGTFQCSVARSTKCLMNELRCNSVKDCSDGSDEDNCPDLSCGKRLGNFYGSFASPDLFRADHSKSDLRCTWYVDTQDNRHVLLQLDLQLGYNDYVKVYDGIEERGDKLLQTFSFHNNRHPVSVESSKGQLTVSYHARSKSTGHGFNATYQVKGYCLPWEHPCGSDEECFTDKQHCDGWWHCPNGKDEENCPACQKNEYPCEGNSGLCYSILDRCNNQKNCPDGSDEKXCFTCQPGNFHCGTNLCIFETWRCDGQEDCQDGSDEHNCLVIVPRKVITAALIGSLVCGLLLVIALGCAFKLYSLRTREYRYIKTSWFYDSLIADYVFL
SIO_010081: LRP3
subclass of: SO_0000673
so part of: LRP3
location: join(2931281..2931389,2937539..2937677,2944968..2945176,2945456..2946599)
location: region:2931281-2946599:1
so has part: feature:2931281-2931389:1:exon
so has part: feature:2937539-2937677:1:exon
so has part: feature:2944968-2945176:1:exon
so has part: feature:2945456-2946599:1:exon

XP_031411289.1
type: Protein
SIO_000068: ncbiprotein

position:2931281:1
position: 2931281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2946599:1
position: 2946599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2931281-2931389:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2937539-2937677:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2944968-2945176:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2945456-2946599:1:exon

LOC100542388
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100542388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2946984..2954779
location: region:2946984-2954779:1
so has part: feature:2946984-2954779:1:exon
subclass of: SO_0000010

100542388
type: Gene
SIO_000068: ncbigene

position:2946984:1
position: 2946984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2954779:1
position: 2954779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2946984-2954779:1:exon

LOC100542388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100542388
product: G patch domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010717960.3
SIO_010081: LOC100542388
subclass of: SO_0000673
so part of: LOC100542388
location: join(2946984..2947001,2947910..2948216,2948570..2948857,2949236..2949417,2949687..2949814,2950093..2950226,2950593..2950762,2951444..2951651,2952015..2952125,2952570..2952694,2953228..2953373,2954552..2954779)
location: region:2946984-2954779:1
so has part: feature:2946984-2947001:1:exon
so has part: feature:2947910-2948216:1:exon
so has part: feature:2948570-2948857:1:exon
so has part: feature:2949236-2949417:1:exon
so has part: feature:2949687-2949814:1:exon
so has part: feature:2950093-2950226:1:exon
so has part: feature:2950593-2950762:1:exon
so has part: feature:2951444-2951651:1:exon
so has part: feature:2952015-2952125:1:exon
so has part: feature:2952570-2952694:1:exon
so has part: feature:2953228-2953373:1:exon
so has part: feature:2954552-2954779:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2946984-2947001:1:exon

position:2947001:1
position: 2947001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2947910-2948216:1:exon

position:2947910:1
position: 2947910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948216:1
position: 2948216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2948570-2948857:1:exon

position:2948570:1
position: 2948570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948857:1
position: 2948857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2949236-2949417:1:exon

position:2949236:1
position: 2949236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949417:1
position: 2949417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2949687-2949814:1:exon

position:2949687:1
position: 2949687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949814:1
position: 2949814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2950093-2950226:1:exon

position:2950093:1
position: 2950093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2950226:1
position: 2950226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2950593-2950762:1:exon

position:2950593:1
position: 2950593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2950762:1
position: 2950762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2951444-2951651:1:exon

position:2951444:1
position: 2951444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2951651:1
position: 2951651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2952015-2952125:1:exon

position:2952015:1
position: 2952015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2952125:1
position: 2952125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2952570-2952694:1:exon

position:2952570:1
position: 2952570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2952694:1
position: 2952694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2953228-2953373:1:exon

position:2953228:1
position: 2953228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2953373:1
position: 2953373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2954552-2954779:1:exon

position:2954552:1
position: 2954552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100542388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100542388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 1-like
translation: MNAFIDIEVTFLNPISKSLIQCCISLLWLFCFVFFHYSVKIYLPPDLPRNYRPVHYFRPVITAGNENYHLQKVLEESTGKLGSDATQQGRHALNASQRREQLGETVLKGPAPSVLEYLSEKDRERLKEVKQASEQQMKAKMLPQQPRNSRFQPASPNDASHKWQMLLGGQLANAGSSDFKPFARDPEKQKRYESFVKSLKQGEKVDTLERYLDPSMTEWERGREQEEFFRAAMFYKSSNSALASRFTRAKYEDDADKVEVPRDQENDIDDKESAVKMKMFGKLTRDKFEWHPEKLLCKRFNVPDPYPESSIVGLPKVKRDKYSVFNFLTLSEPSTSVTQETNERKQENNSVSKPKKPSRWDISDKEKEKKDSISEFISLARSKADLLQKPPVPTTEESGTKAAETLPSEVDNENKDQEQEEESRPSMDLFKAIFVSSSDEKSSSEEESDEEQQPTTSVVDSETTEQAGLPDSSSSNIQDSVTVKAEPGVSSLPASKQEQNNAEEFGPKLPPSFSSGSTWQQETVVPASSPGPSRKEKHKKSKEKHKTKRDHKHKKEKKKKHRKHKTKGKHKNKKSEKDSSSDTTDSSDSLSDIDSTNLSPKELLRRLKQLQY
SIO_010081: LOC100542388
subclass of: SO_0000673
so part of: LOC100542388
location: join(2946984..2947001,2947910..2948216,2948570..2948857,2949236..2949417,2949687..2949814,2950093..2950226,2950593..2950762,2951444..2951651,2952015..2952125,2952570..2952694,2953228..2953373,2954552..2954573)
location: region:2946984-2954573:1
so has part: feature:2946984-2947001:1:exon
so has part: feature:2947910-2948216:1:exon
so has part: feature:2948570-2948857:1:exon
so has part: feature:2949236-2949417:1:exon
so has part: feature:2949687-2949814:1:exon
so has part: feature:2950093-2950226:1:exon
so has part: feature:2950593-2950762:1:exon
so has part: feature:2951444-2951651:1:exon
so has part: feature:2952015-2952125:1:exon
so has part: feature:2952570-2952694:1:exon
so has part: feature:2953228-2953373:1:exon
so has part: feature:2954552-2954573:1:exon

XP_010716262.1
type: Protein
SIO_000068: ncbiprotein

position:2954573:1
position: 2954573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2946984-2947001:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2947910-2948216:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2948570-2948857:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2949236-2949417:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2949687-2949814:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2950093-2950226:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2950593-2950762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2951444-2951651:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2952015-2952125:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2952570-2952694:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2953228-2953373:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2954552-2954573:1:exon

WDR88
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: WDR88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2955506..2965676
location: region:2955506-2965676:1
so has part: feature:2955506-2965676:1:exon
subclass of: SO_0000010

104912927
type: Gene
SIO_000068: ncbigene

position:2955506:1
position: 2955506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2965676:1
position: 2965676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2955506-2965676:1:exon

WDR88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: WDR88
product: WD repeat domain 88
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010717750.2
SIO_010081: WDR88
subclass of: SO_0000673
so part of: WDR88
location: join(2955506..2956082,2956669..2956779,2957361..2957446,2958829..2958892,2959386..2959524,2959769..2959898,2961898..2962082,2962643..2962725,2964409..2964477,2964896..2964988,2965347..2965676)
location: region:2955506-2965676:1
so has part: feature:2955506-2956082:1:exon
so has part: feature:2956669-2956779:1:exon
so has part: feature:2957361-2957446:1:exon
so has part: feature:2958829-2958892:1:exon
so has part: feature:2959386-2959524:1:exon
so has part: feature:2959769-2959898:1:exon
so has part: feature:2961898-2962082:1:exon
so has part: feature:2962643-2962725:1:exon
so has part: feature:2964409-2964477:1:exon
so has part: feature:2964896-2964988:1:exon
so has part: feature:2965347-2965676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2955506-2956082:1:exon

position:2956082:1
position: 2956082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2956669-2956779:1:exon

position:2956669:1
position: 2956669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2956779:1
position: 2956779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2957361-2957446:1:exon

position:2957361:1
position: 2957361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2957446:1
position: 2957446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2958829-2958892:1:exon

position:2958829:1
position: 2958829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2958892:1
position: 2958892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2959386-2959524:1:exon

position:2959386:1
position: 2959386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959524:1
position: 2959524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2959769-2959898:1:exon

position:2959769:1
position: 2959769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2959898:1
position: 2959898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2961898-2962082:1:exon

position:2961898:1
position: 2961898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962082:1
position: 2962082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2962643-2962725:1:exon

position:2962643:1
position: 2962643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962725:1
position: 2962725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2964409-2964477:1:exon

position:2964409:1
position: 2964409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2964477:1
position: 2964477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2964896-2964988:1:exon

position:2964896:1
position: 2964896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2964988:1
position: 2964988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2965347-2965676:1:exon

position:2965347:1
position: 2965347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: WDR88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 88
translation: MAAGGSREDPLAIEPLPELQPEMSLAEGRWGDQEQMAEIQFKILRGHSDTVSSCHFCCEDSKILSCSYDRTVKLWDVAKGFPVQIFEEHTAPVSECNLSPDDRRVVTSSYDNTVKTWDMETGKVLWTVEHEGIVTSCNISYDGKYVVSASDKGNAISVFDAVSATEVACVQGHHRSTITRCCFDPDNQRVTSVSYDKTIKLWDMVARSTSITIKEGHSNAISDCCFTSDGRYLCTASWDRSLKIWDVKTGEFRSHGPVTLNQGHEGSVSSCCFSQDASLVVSGGYDNAITIWETDAGYKKLSLKGHWDWVTDVAISEDKKWILSASKDSTLRLWNIERMDCIPSVIESRKEKGSKIAQCEECERPFLSLQHGGFEVISKCVFCRLSSPARNILPSPPSIPPDL
SIO_010081: WDR88
subclass of: SO_0000673
so part of: WDR88
location: join(2955969..2956082,2956669..2956779,2957361..2957446,2958829..2958892,2959386..2959524,2959769..2959898,2961898..2962082,2962643..2962725,2964409..2964477,2964896..2964988,2965347..2965484)
location: region:2955969-2965484:1
so has part: feature:2955969-2956082:1:exon
so has part: feature:2956669-2956779:1:exon
so has part: feature:2957361-2957446:1:exon
so has part: feature:2958829-2958892:1:exon
so has part: feature:2959386-2959524:1:exon
so has part: feature:2959769-2959898:1:exon
so has part: feature:2961898-2962082:1:exon
so has part: feature:2962643-2962725:1:exon
so has part: feature:2964409-2964477:1:exon
so has part: feature:2964896-2964988:1:exon
so has part: feature:2965347-2965484:1:exon

XP_010716052.1
type: Protein
SIO_000068: ncbiprotein

position:2955969:1
position: 2955969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2965484:1
position: 2965484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2955969-2956082:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2956669-2956779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2957361-2957446:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2958829-2958892:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2959386-2959524:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2959769-2959898:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2961898-2962082:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2962643-2962725:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2964409-2964477:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2964896-2964988:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2965347-2965484:1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 2966647..2966719
location: region:2966647-2966719:1
so has part: feature:2966647-2966719:1:exon
subclass of: SO_0000663

109369858
type: Gene
SIO_000068: ncbigene

position:2966647:1
position: 2966647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2966719:1
position: 2966719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2966647-2966719:1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:2966681..2966683,aa:Thr,seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: 2966647..2966719
location: region:2966647-2966719:1
so has part: feature:2966647-2966719:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2966647-2966719:1:exon

LOC116216189
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116216189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2971812..2979924
location: region:2971812-2979924:1
so has part: feature:2971812-2979924:1:exon
subclass of: SO_0000011

116216189
type: Gene
SIO_000068: ncbigene

position:2971812:1
position: 2971812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2979924:1
position: 2979924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971812-2979924:1:exon

LOC116216189
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216189
product: uncharacterized LOC116216189
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161170.1
SIO_010081: LOC116216189
subclass of: SO_0000673
so part of: LOC116216189
location: join(2971812..2972246,2973716..2973857,2979837..2979924)
location: region:2971812-2979924:1
so has part: feature:2971812-2972246:1:exon
so has part: feature:2973716-2973857:1:exon
so has part: feature:2979837-2979924:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2971812-2972246:1:exon

position:2972246:1
position: 2972246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2973716-2973857:1:exon

position:2973716:1
position: 2973716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2973857:1
position: 2973857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2979837-2979924:1:exon

position:2979837:1
position: 2979837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GPATCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2982698..2986518
location: region:2982698-2986518:1
so has part: feature:2982698-2986518:1:exon
subclass of: SO_0000010

104912928
type: Gene
SIO_000068: ncbigene

position:2982698:1
position: 2982698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2986518:1
position: 2986518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2982698-2986518:1:exon

GPATCH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GPATCH1
product: G-patch domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 215 samples with support for all annotated introns
transcript id: XM_010717751.3
SIO_010081: GPATCH1
subclass of: SO_0000673
so part of: GPATCH1
location: join(2982698..2982824,2984118..2984252,2984540..2984625,2985040..2985200,2985542..2985639,2985804..2985862,2986207..2986518)
location: region:2982698-2986518:1
so has part: feature:2982698-2982824:1:exon
so has part: feature:2984118-2984252:1:exon
so has part: feature:2984540-2984625:1:exon
so has part: feature:2985040-2985200:1:exon
so has part: feature:2985542-2985639:1:exon
so has part: feature:2985804-2985862:1:exon
so has part: feature:2986207-2986518:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2982698-2982824:1:exon

position:2982824:1
position: 2982824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2984118-2984252:1:exon

position:2984118:1
position: 2984118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2984252:1
position: 2984252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2984540-2984625:1:exon

position:2984540:1
position: 2984540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2984625:1
position: 2984625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2985040-2985200:1:exon

position:2985040:1
position: 2985040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2985200:1
position: 2985200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2985542-2985639:1:exon

position:2985542:1
position: 2985542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2985639:1
position: 2985639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2985804-2985862:1:exon

position:2985804:1
position: 2985804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2985862:1
position: 2985862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2986207-2986518:1:exon

position:2986207:1
position: 2986207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPATCH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GPATCH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G patch domain-containing protein 1
translation: MAADSSDGEEEDLVNYGTALQPLQEGERIKKPVPLQEQTVKDAKGRYQRFHGAFTGGFSAGYFNTVGTKEGWTPSAFISSRQKRADRTVLGPEDFMDEEDLSEFGIAPKDITTTDDFASKAKDRIKEKARQIAGVVAAIPGTSAFDDLIGPSKITIGVELLRKMGWKEGQGIGPRVKRKPRRQKPDPEVKIYGCALPPGLSGGSEDEEDEYQPENVTFAPKDVMPVDLTPKENVHGLGYKGLDPSQALFGTSGREHLNLFAVDSEDSSNLIGDVRNNRRRKLGITGQVRYCFRYISTVIKSKM
SIO_010081: GPATCH1
subclass of: SO_0000673
so part of: GPATCH1
location: join(2982749..2982824,2984118..2984252,2984540..2984625,2985040..2985200,2985542..2985639,2985804..2985862,2986207..2986503)
location: region:2982749-2986503:1
so has part: feature:2982749-2982824:1:exon
so has part: feature:2984118-2984252:1:exon
so has part: feature:2984540-2984625:1:exon
so has part: feature:2985040-2985200:1:exon
so has part: feature:2985542-2985639:1:exon
so has part: feature:2985804-2985862:1:exon
so has part: feature:2986207-2986503:1:exon

XP_010716053.1
type: Protein
SIO_000068: ncbiprotein

position:2982749:1
position: 2982749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2986503:1
position: 2986503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2982749-2982824:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2984118-2984252:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2984540-2984625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2985040-2985200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2985542-2985639:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2985804-2985862:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2986207-2986503:1:exon

LOC109369758
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2996297..3000090
location: region:2996297-3000090:1
so has part: feature:2996297-3000090:1:exon
subclass of: SO_0000011

109369758
type: Gene
SIO_000068: ncbigene

position:2996297:1
position: 2996297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3000090:1
position: 3000090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2996297-3000090:1:exon

LOC109369758
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369758
product: uncharacterized LOC109369758
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004161169.1
SIO_010081: LOC109369758
subclass of: SO_0000673
so part of: LOC109369758
location: join(2996297..2998117,2999319..2999436,3000009..3000090)
location: region:2996297-3000090:1
so has part: feature:2996297-2998117:1:exon
so has part: feature:2999319-2999436:1:exon
so has part: feature:3000009-3000090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2996297-2998117:1:exon

position:2998117:1
position: 2998117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2999319-2999436:1:exon

position:2999319:1
position: 2999319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2999436:1
position: 2999436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3000009-3000090:1:exon

position:3000009:1
position: 3000009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912929
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3001103..3008007)
location: region:3001103-3008007:-1
so has part: feature:3001103-3008007:-1:exon
subclass of: SO_0000010

104912929
type: Gene
SIO_000068: ncbigene

position:3001103:-1
position: 3001103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3008007:-1
position: 3008007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3001103-3008007:-1:exon

LOC104912929
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912929
product: rhophilin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 153 samples with support for all annotated introns
transcript id: XM_010717752.3
SIO_010081: LOC104912929
subclass of: SO_0000673
so part of: LOC104912929
location: complement(join(3001103..3001664,3002156..3002233,3003290..3003365,3006142..3006270,3007867..3008007))
location: region:3001103-3008007:-1
so has part: feature:3007867-3008007:-1:exon
so has part: feature:3006142-3006270:-1:exon
so has part: feature:3003290-3003365:-1:exon
so has part: feature:3002156-3002233:-1:exon
so has part: feature:3001103-3001664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3007867-3008007:-1:exon

position:3007867:-1
position: 3007867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3006142-3006270:-1:exon

position:3006142:-1
position: 3006142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3006270:-1
position: 3006270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3003290-3003365:-1:exon

position:3003290:-1
position: 3003290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003365:-1
position: 3003365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3002156-3002233:-1:exon

position:3002156:-1
position: 3002156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002233:-1
position: 3002233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3001103-3001664:-1:exon

position:3001664:-1
position: 3001664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912929
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912929
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhophilin-2-like
translation: MRTGAENLLRATTNNKVREQVLLELSFVNSDLQILKEELEGLNISVEVYQNTEGTFSIPLVPLGLKETKEVDFTLPLKDFILEHYSEDSSEYEDEIADLVDLRQACRTPSRDEAGIEMLMSYFLQLGFIENRFFPPTRHMGVLFTW
SIO_010081: LOC104912929
subclass of: SO_0000673
so part of: LOC104912929
location: complement(join(3001536..3001664,3002156..3002233,3003290..3003365,3006142..3006270,3007867..3007895))
location: region:3001536-3007895:-1
so has part: feature:3007867-3007895:-1:exon
so has part: feature:3006142-3006270:-1:exon
so has part: feature:3003290-3003365:-1:exon
so has part: feature:3002156-3002233:-1:exon
so has part: feature:3001536-3001664:-1:exon

XP_010716054.1
type: Protein
SIO_000068: ncbiprotein

position:3001536:-1
position: 3001536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3007895:-1
position: 3007895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3007867-3007895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3006142-3006270:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3003290-3003365:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3002156-3002233:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3001536-3001664:-1:exon

LOC100542236
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100542236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3007922..3016530)
location: region:3007922-3016530:-1
so has part: feature:3007922-3016530:-1:exon
subclass of: SO_0000010

100542236
type: Gene
SIO_000068: ncbigene

position:3007922:-1
position: 3007922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3016530:-1
position: 3016530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3007922-3016530:-1:exon

LOC100542236
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100542236
product: rhophilin-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555391.1
SIO_010081: LOC100542236
subclass of: SO_0000673
so part of: LOC100542236
location: complement(join(3007922..3007982,3009264..3009484,3010315..3010461,3010560..3010636,3011253..3011447,3011551..3011670,3012137..3012293,3013569..3013756,3015929..3016530))
location: region:3007922-3016530:-1
so has part: feature:3015929-3016530:-1:exon
so has part: feature:3013569-3013756:-1:exon
so has part: feature:3012137-3012293:-1:exon
so has part: feature:3011551-3011670:-1:exon
so has part: feature:3011253-3011447:-1:exon
so has part: feature:3010560-3010636:-1:exon
so has part: feature:3010315-3010461:-1:exon
so has part: feature:3009264-3009484:-1:exon
so has part: feature:3007922-3007982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3015929-3016530:-1:exon

position:3015929:-1
position: 3015929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3013569-3013756:-1:exon

position:3013569:-1
position: 3013569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3013756:-1
position: 3013756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3012137-3012293:-1:exon

position:3012137:-1
position: 3012137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3012293:-1
position: 3012293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3011551-3011670:-1:exon

position:3011551:-1
position: 3011551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3011670:-1
position: 3011670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3011253-3011447:-1:exon

position:3011253:-1
position: 3011253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3011447:-1
position: 3011447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3010560-3010636:-1:exon

position:3010560:-1
position: 3010560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3010636:-1
position: 3010636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3010315-3010461:-1:exon

position:3010315:-1
position: 3010315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3010461:-1
position: 3010461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3009264-3009484:-1:exon

position:3009264:-1
position: 3009264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3009484:-1
position: 3009484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3007922-3007982:-1:exon

position:3007982:-1
position: 3007982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100542236
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100542236
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rhophilin-2-like
translation: MSPAMLNVLVKMMLAQAQECAFEQISLPGIRNEFFTLVKMTQEVAKVGEVYMMVNTAVTQEPVKENIPYSWSKLVQIKADHYRALAHYFLATILCDHELQPNDDEDQQEKALSQLYDYVPEGVMILTILKDKVQRKQLGKAHLRKAIVYHEEALRVCGLCKKLRNIEVLLEVLTAAHKRSLLKYAQQETEDDFLSLIQAPDILPKTEHKVEMVAPQFSKVKVKDFFHRLGPLSVFSAKQRWTAPRTIHFHCETGELGFSLKGGSPVQIYCLDPVCSAASAGLKEGDYIVSIGGVDCKWLGVNEVLEKFKSVGEQPIEFEVISCQDTTASMVRNEANTFVDLICEAFFFFLFLDVILLRRLVEANYKIKELS
SIO_010081: LOC100542236
subclass of: SO_0000673
so part of: LOC100542236
location: complement(join(3007922..3007982,3009264..3009484,3010315..3010461,3010560..3010636,3011253..3011447,3011551..3011670,3012137..3012293,3013569..3013706))
location: region:3007922-3013706:-1
so has part: feature:3013569-3013706:-1:exon
so has part: feature:3012137-3012293:-1:exon
so has part: feature:3011551-3011670:-1:exon
so has part: feature:3011253-3011447:-1:exon
so has part: feature:3010560-3010636:-1:exon
so has part: feature:3010315-3010461:-1:exon
so has part: feature:3009264-3009484:-1:exon
so has part: feature:3007922-3007982:-1:exon

XP_031411251.1
type: Protein
SIO_000068: ncbiprotein

position:3013706:-1
position: 3013706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3013569-3013706:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3012137-3012293:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3011551-3011670:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3011253-3011447:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3010560-3010636:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3010315-3010461:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3009264-3009484:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3007922-3007982:-1:exon

FAAP24
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FAAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3017141..3022362
location: region:3017141-3022362:1
so has part: feature:3017141-3022362:1:exon
subclass of: SO_0000010

100542082
type: Gene
SIO_000068: ncbigene

position:3017141:1
position: 3017141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3022362:1
position: 3022362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3017141-3022362:1:exon

FAAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FAAP24
product: FA core complex associated protein 24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_019619731.2
SIO_010081: FAAP24
subclass of: SO_0000673
so part of: FAAP24
location: join(3017141..3017408,3017838..3017977,3018288..3018440,3020764..3022362)
location: region:3017141-3022362:1
so has part: feature:3017141-3017408:1:exon
so has part: feature:3017838-3017977:1:exon
so has part: feature:3018288-3018440:1:exon
so has part: feature:3020764-3022362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3017141-3017408:1:exon

position:3017408:1
position: 3017408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3017838-3017977:1:exon

position:3017838:1
position: 3017838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3017977:1
position: 3017977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3018288-3018440:1:exon

position:3018288:1
position: 3018288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3018440:1
position: 3018440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3020764-3022362:1:exon

position:3020764:1
position: 3020764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FAAP24
product: FA core complex associated protein 24, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_019619732.2
SIO_010081: FAAP24
subclass of: SO_0000673
so part of: FAAP24
location: join(3017141..3017408,3018288..3018440,3018953..3019887)
location: region:3017141-3019887:1
so has part: feature:3017141-3017408:1:exon
so has part: feature:3018288-3018440:1:exon
so has part: feature:3018953-3019887:1:exon

position:3019887:1
position: 3019887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3017141-3017408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3018288-3018440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3018953-3019887:1:exon

position:3018953:1
position: 3018953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAAP24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FAAP24
product: FA core complex associated protein 24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 218 samples with support for all annotated introns
transcript id: XM_003209804.4
SIO_010081: FAAP24
subclass of: SO_0000673
so part of: FAAP24
location: join(3017146..3017408,3017838..3017977,3018288..3018440,3018953..3019887)
location: region:3017146-3019887:1
so has part: feature:3017146-3017408:1:exon
so has part: feature:3017838-3017977:1:exon
so has part: feature:3018288-3018440:1:exon
so has part: feature:3018953-3019887:1:exon

position:3017146:1
position: 3017146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3017146-3017408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3017838-3017977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3018288-3018440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3018953-3019887:1:exon

FAAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FAAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia core complex-associated protein 24 isoform X2
translation: MTAKGSLPAAAGSVVVPYGHVVGNEKWRGSEMARRLQGKTKLIFEDGLGLVDFHLSNRICVLYISEADLVAGDEFKRRLVRFRNASSLGGIVIVEKTPISEQYFSAVQKLVVLQLGMVLLPVANQEEASQLITQLGPVMVGRGRQLTRQLRDLRNGDTFIERSITETCRGMLTVNSKNL
SIO_010081: FAAP24
subclass of: SO_0000673
so part of: FAAP24
location: join(3017297..3017408,3017838..3017977,3018288..3018440,3020764..3020898)
location: region:3017297-3020898:1
so has part: feature:3017297-3017408:1:exon
so has part: feature:3017838-3017977:1:exon
so has part: feature:3018288-3018440:1:exon
so has part: feature:3020764-3020898:1:exon

XP_019475276.1
type: Protein
SIO_000068: ncbiprotein

position:3017297:1
position: 3017297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3020898:1
position: 3020898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3017297-3017408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3017838-3017977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3018288-3018440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3020764-3020898:1:exon

FAAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FAAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia core complex-associated protein 24 isoform X1
translation: MTAKGSLPAAAGSVVVPYGHVVGNEKWRGSEMARRLQGKTKLIFEDGLGLVDFHLSNRICVLYISEADLVAGDEFKRRLVRFRNASSLGGIVIVEKTPISEQYFSAVQKLVVLQLGMVLLPVANQEEASQLITQLVREQSKDHTSNPFLRKQCSQLAEATVFRTVQQIPGVGKTKALLLLQQFGSIHQICNASVKELELIVGPTVAQQIHTFLGS
SIO_010081: FAAP24
subclass of: SO_0000673
so part of: FAAP24
location: join(3017297..3017408,3017838..3017977,3018288..3018440,3018953..3019195)
location: region:3017297-3019195:1
so has part: feature:3017297-3017408:1:exon
so has part: feature:3017838-3017977:1:exon
so has part: feature:3018288-3018440:1:exon
so has part: feature:3018953-3019195:1:exon

XP_003209852.1
type: Protein
SIO_000068: ncbiprotein

position:3019195:1
position: 3019195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3017297-3017408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3017838-3017977:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3018288-3018440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3018953-3019195:1:exon

FAAP24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FAAP24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: Fanconi anemia core complex-associated protein 24 isoform X3
translation: MWLGTRSGGDQRWPAGCKASSLGGIVIVEKTPISEQYFSAVQKLVVLQLGMVLLPVANQEEASQLITQLVREQSKDHTSNPFLRKQCSQLAEATVFRTVQQIPGVGKTKALLLLQQFGSIHQICNASVKELELIVGPTVAQQIHTFLGS
SIO_010081: FAAP24
subclass of: SO_0000673
so part of: FAAP24
location: join(3017355..3017408,3018288..3018440,3018953..3019195)
location: region:3017355-3019195:1
so has part: feature:3017355-3017408:1:exon
so has part: feature:3018288-3018440:1:exon
so has part: feature:3018953-3019195:1:exon

XP_019475277.1
type: Protein
SIO_000068: ncbiprotein

position:3017355:1
position: 3017355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3017355-3017408:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3018288-3018440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3018953-3019195:1:exon

CEP89
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CEP89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3023791..3043466)
location: region:3023791-3043466:-1
so has part: feature:3023791-3043466:-1:exon
subclass of: SO_0000010

100541929
type: Gene
SIO_000068: ncbigene

position:3023791:-1
position: 3023791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3043466:-1
position: 3043466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3023791-3043466:-1:exon

CEP89
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CEP89
product: centrosomal protein 89
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019619668.2
SIO_010081: CEP89
subclass of: SO_0000673
so part of: CEP89
location: complement(join(3023791..3025338,3026653..3026822,3029370..3029459,3030246..3030387,3031047..3031214,3031872..3032052,3033093..3033208,3033620..3033723,3034598..3034681,3035723..3035773,3036129..3036271,3036609..3036827,3038166..3038220,3038674..3038702,3039431..3039533,3040758..3040959,3041522..3041677,3042864..3042970,3043458..3043466))
location: region:3023791-3043466:-1
so has part: feature:3043458-3043466:-1:exon
so has part: feature:3042864-3042970:-1:exon
so has part: feature:3041522-3041677:-1:exon
so has part: feature:3040758-3040959:-1:exon
so has part: feature:3039431-3039533:-1:exon
so has part: feature:3038674-3038702:-1:exon
so has part: feature:3038166-3038220:-1:exon
so has part: feature:3036609-3036827:-1:exon
so has part: feature:3036129-3036271:-1:exon
so has part: feature:3035723-3035773:-1:exon
so has part: feature:3034598-3034681:-1:exon
so has part: feature:3033620-3033723:-1:exon
so has part: feature:3033093-3033208:-1:exon
so has part: feature:3031872-3032052:-1:exon
so has part: feature:3031047-3031214:-1:exon
so has part: feature:3030246-3030387:-1:exon
so has part: feature:3029370-3029459:-1:exon
so has part: feature:3026653-3026822:-1:exon
so has part: feature:3023791-3025338:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3043458-3043466:-1:exon

position:3043458:-1
position: 3043458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3042864-3042970:-1:exon

position:3042864:-1
position: 3042864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3042970:-1
position: 3042970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3041522-3041677:-1:exon

position:3041522:-1
position: 3041522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3041677:-1
position: 3041677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3040758-3040959:-1:exon

position:3040758:-1
position: 3040758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3040959:-1
position: 3040959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3039431-3039533:-1:exon

position:3039431:-1
position: 3039431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3039533:-1
position: 3039533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3038674-3038702:-1:exon

position:3038674:-1
position: 3038674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3038702:-1
position: 3038702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3038166-3038220:-1:exon

position:3038166:-1
position: 3038166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3038220:-1
position: 3038220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3036609-3036827:-1:exon

position:3036609:-1
position: 3036609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3036827:-1
position: 3036827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3036129-3036271:-1:exon

position:3036129:-1
position: 3036129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3036271:-1
position: 3036271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3035723-3035773:-1:exon

position:3035723:-1
position: 3035723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3035773:-1
position: 3035773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3034598-3034681:-1:exon

position:3034598:-1
position: 3034598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3034681:-1
position: 3034681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3033620-3033723:-1:exon

position:3033620:-1
position: 3033620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3033723:-1
position: 3033723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3033093-3033208:-1:exon

position:3033093:-1
position: 3033093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3033208:-1
position: 3033208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3031872-3032052:-1:exon

position:3031872:-1
position: 3031872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3032052:-1
position: 3032052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3031047-3031214:-1:exon

position:3031047:-1
position: 3031047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3031214:-1
position: 3031214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3030246-3030387:-1:exon

position:3030246:-1
position: 3030246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3030387:-1
position: 3030387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3029370-3029459:-1:exon

position:3029370:-1
position: 3029370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3029459:-1
position: 3029459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3026653-3026822:-1:exon

position:3026653:-1
position: 3026653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3026822:-1
position: 3026822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3023791-3025338:-1:exon

position:3025338:-1
position: 3025338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CEP89
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CEP89
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 89 kDa
translation: MTHKHIAHGLVPAATIAPKPAVPRTPPPRSPNPSPERLRSALAAAILATTLTGRTVAIPQPRQRSLSEGDSTHIEQEGFEPYATVTELRMGPNWKLDGSDRSPAQSLEITGSYCEDEDMETYLSDGGREAESSSDGNEKQGESFSTSAIYAVPCKNKKEEFQPSPSNNAEKKETSHESQFQVSVDESNMQSEENKRLGLNSKEEKSLAESLIREKPPPSPDVSIRARQARENMTREKLRELQQENWSLNKAYQAVGQQLDGIKQQMEEQQLKLKRLEAENGKLKEAAKTTHNEGETTELLSLRQQAQELVDENDALKLTVHRLNVELSRYQTKFRPLTREEHLKLNSLPTKGPPPPWLLDMKYLSPLLLAYEDRIKEKEDLNFAHEEDMKNFKVQVEELVKENEDLHEQLNKNNLITTTEWHQLQTQARLVLEENRLLMEQLEIQQAKAKDNHRQHVQEASKLTKQIIILEEKKQSQEGQIRDYQKQLKALHTTCEELKAKLDSRIAAEEHFALVNDLKSHLQQEQEKKRSEVEDLMGKIASLQAQNKKLLLQKNNFLADKTTLEAEMEMTQKTNRRLKKKIGLLKQQLEEAIEKEVAAHHYLTNLIGLVEKIAQERDHLVFLAKCLENENHGVLNKIVEGSLRLGRLEEKVKLYKKKAAGKLGDISLKLTEQEKDFAGKTAQYQQEMKHLQRLLQDKQETLDEVLQQKKKVEGELEVIWESTSKENRRMRELLRKSLGNNNMWNTVTGNESYLDEISQKDLLYGHDFSYCDVKQSPTKNEAQQQS
SIO_010081: CEP89
subclass of: SO_0000673
so part of: CEP89
location: complement(join(3025107..3025338,3026653..3026822,3029370..3029459,3030246..3030387,3031047..3031214,3031872..3032052,3033093..3033208,3033620..3033723,3034598..3034681,3035723..3035773,3036129..3036271,3036609..3036827,3038166..3038220,3038674..3038702,3039431..3039533,3040758..3040959,3041522..3041677,3042864..3042970,3043458..3043466))
location: region:3025107-3043466:-1
so has part: feature:3043458-3043466:-1:exon
so has part: feature:3042864-3042970:-1:exon
so has part: feature:3041522-3041677:-1:exon
so has part: feature:3040758-3040959:-1:exon
so has part: feature:3039431-3039533:-1:exon
so has part: feature:3038674-3038702:-1:exon
so has part: feature:3038166-3038220:-1:exon
so has part: feature:3036609-3036827:-1:exon
so has part: feature:3036129-3036271:-1:exon
so has part: feature:3035723-3035773:-1:exon
so has part: feature:3034598-3034681:-1:exon
so has part: feature:3033620-3033723:-1:exon
so has part: feature:3033093-3033208:-1:exon
so has part: feature:3031872-3032052:-1:exon
so has part: feature:3031047-3031214:-1:exon
so has part: feature:3030246-3030387:-1:exon
so has part: feature:3029370-3029459:-1:exon
so has part: feature:3026653-3026822:-1:exon
so has part: feature:3025107-3025338:-1:exon

XP_019475213.1
type: Protein
SIO_000068: ncbiprotein

position:3025107:-1
position: 3025107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3043458-3043466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3042864-3042970:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3041522-3041677:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3040758-3040959:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3039431-3039533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3038674-3038702:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3038166-3038220:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3036609-3036827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3036129-3036271:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3035723-3035773:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3034598-3034681:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3033620-3033723:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3033093-3033208:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3031872-3032052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3031047-3031214:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3030246-3030387:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3029370-3029459:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3026653-3026822:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3025107-3025338:-1:exon

LOC104912930
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3053479..3056263
location: region:3053479-3056263:1
so has part: feature:3053479-3056263:1:exon
subclass of: SO_0000010

104912930
type: Gene
SIO_000068: ncbigene

position:3053479:1
position: 3053479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3056263:1
position: 3056263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3053479-3056263:1:exon

LOC104912930
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912930
product: putative ATP-dependent RNA helicase TDRD12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010717753.3
SIO_010081: LOC104912930
subclass of: SO_0000673
so part of: LOC104912930
location: join(3053479..3053619,3054589..3054643,3055307..3055420,3055508..3055661,3055754..3055820,3056129..3056263)
location: region:3053479-3056263:1
so has part: feature:3053479-3053619:1:exon
so has part: feature:3054589-3054643:1:exon
so has part: feature:3055307-3055420:1:exon
so has part: feature:3055508-3055661:1:exon
so has part: feature:3055754-3055820:1:exon
so has part: feature:3056129-3056263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3053479-3053619:1:exon

position:3053619:1
position: 3053619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3054589-3054643:1:exon

position:3054589:1
position: 3054589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3054643:1
position: 3054643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3055307-3055420:1:exon

position:3055307:1
position: 3055307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3055420:1
position: 3055420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3055508-3055661:1:exon

position:3055508:1
position: 3055508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3055661:1
position: 3055661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3055754-3055820:1:exon

position:3055754:1
position: 3055754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3055820:1
position: 3055820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3056129-3056263:1:exon

position:3056129:1
position: 3056129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912930
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912930
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ATP-dependent RNA helicase TDRD12
translation: MSELQNVSLKENSSENCNSSKVIMGNHLCDGVAQTKEAEDSSLHQQKCFYPKIKWFENEEAVTVKVRIARIADYKCEFSEEKVIFSACSEGKFYLADMELYQCILTEKSACVIKDKEAIIVLRKEKKGAWCKLLKNKNPHVSFDFDYWEDSEDKSPFPVGTKKLHRTAAVAEELVDFSEDSGAESDE
SIO_010081: LOC104912930
subclass of: SO_0000673
so part of: LOC104912930
location: join(3053532..3053619,3054589..3054643,3055307..3055420,3055508..3055661,3055754..3055820,3056129..3056214)
location: region:3053532-3056214:1
so has part: feature:3053532-3053619:1:exon
so has part: feature:3054589-3054643:1:exon
so has part: feature:3055307-3055420:1:exon
so has part: feature:3055508-3055661:1:exon
so has part: feature:3055754-3055820:1:exon
so has part: feature:3056129-3056214:1:exon

XP_010716055.1
type: Protein
SIO_000068: ncbiprotein

position:3053532:1
position: 3053532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3056214:1
position: 3056214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3053532-3053619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3054589-3054643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3055307-3055420:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3055508-3055661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3055754-3055820:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3056129-3056214:1:exon

SLC7A9
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC7A9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3059495..3071441)
location: region:3059495-3071441:-1
so has part: feature:3059495-3071441:-1:exon
subclass of: SO_0000010

100541772
type: Gene
SIO_000068: ncbigene

position:3059495:-1
position: 3059495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3071441:-1
position: 3071441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3059495-3071441:-1:exon

SLC7A9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC7A9
product: solute carrier family 7 member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_010717754.3
SIO_010081: SLC7A9
subclass of: SO_0000673
so part of: SLC7A9
location: complement(join(3059495..3059593,3060468..3060642,3061218..3061367,3062131..3062227,3063016..3063119,3064725..3064848,3065174..3065218,3066709..3066808,3067120..3067245,3067878..3068120,3069043..3069190,3070316..3070441,3071297..3071441))
location: region:3059495-3071441:-1
so has part: feature:3071297-3071441:-1:exon
so has part: feature:3070316-3070441:-1:exon
so has part: feature:3069043-3069190:-1:exon
so has part: feature:3067878-3068120:-1:exon
so has part: feature:3067120-3067245:-1:exon
so has part: feature:3066709-3066808:-1:exon
so has part: feature:3065174-3065218:-1:exon
so has part: feature:3064725-3064848:-1:exon
so has part: feature:3063016-3063119:-1:exon
so has part: feature:3062131-3062227:-1:exon
so has part: feature:3061218-3061367:-1:exon
so has part: feature:3060468-3060642:-1:exon
so has part: feature:3059495-3059593:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3071297-3071441:-1:exon

position:3071297:-1
position: 3071297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3070316-3070441:-1:exon

position:3070316:-1
position: 3070316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3070441:-1
position: 3070441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3069043-3069190:-1:exon

position:3069043:-1
position: 3069043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3069190:-1
position: 3069190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3067878-3068120:-1:exon

position:3067878:-1
position: 3067878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3068120:-1
position: 3068120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3067120-3067245:-1:exon

position:3067120:-1
position: 3067120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3067245:-1
position: 3067245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3066709-3066808:-1:exon

position:3066709:-1
position: 3066709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066808:-1
position: 3066808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3065174-3065218:-1:exon

position:3065174:-1
position: 3065174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3065218:-1
position: 3065218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3064725-3064848:-1:exon

position:3064725:-1
position: 3064725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3064848:-1
position: 3064848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3063016-3063119:-1:exon

position:3063016:-1
position: 3063016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3063119:-1
position: 3063119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3062131-3062227:-1:exon

position:3062131:-1
position: 3062131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3062227:-1
position: 3062227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3061218-3061367:-1:exon

position:3061218:-1
position: 3061218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3061367:-1
position: 3061367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3060468-3060642:-1:exon

position:3060468:-1
position: 3060468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3060642:-1
position: 3060642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3059495-3059593:-1:exon

position:3059593:-1
position: 3059593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC7A9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC7A9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: B(0,+)-type amino acid transporter 1
translation: MGEGSLRKRKEQGNRTEDGQSIQSQEPQATNLKKEVGLISGICMIVGTIIGSGIFVSPKSVLANVGAVGPCLTIWAVCGVLATLGALCFAELGTTITKSGGEYPYLMEAFGPIPAFLFSWASLLVIKPSSFAIICLSFAEYASAPFYPGCDPPPVVIKCLAAAAIVVITIVNSLSVKLGSYLQNFLTAAKMIVVAIIAISGIVLLAQGKTQNFQDSFKDSKISVSSIGLAFYNGLWAYDGWNQLNYITEELKNPYRNLPLSIIIGIPLVTVCYILINISYFTTMTSTELLQSQAVAVTFGDRVLYPASWIIPLFVAFSTIGSANGVCFTAGRLVYVAGREGHMLKVLSYISVKRLTPAPAIIFYGAITIIYIIPGDINTLINYFSFAVWIFYGLSVFALIVMRFTRKELKRPIKIPIVIPVIVTLISILLVLAPIITAPELAYLYCVLFILSGLIFYVLFVHFKFKWSQKISDPITMHLQMLLEVVPPEEVAE
SIO_010081: SLC7A9
subclass of: SO_0000673
so part of: SLC7A9
location: complement(join(3059529..3059593,3060468..3060642,3061218..3061367,3062131..3062227,3063016..3063119,3064725..3064848,3065174..3065218,3066709..3066808,3067120..3067245,3067878..3068120,3069043..3069190,3070316..3070420))
location: region:3059529-3070420:-1
so has part: feature:3070316-3070420:-1:exon
so has part: feature:3069043-3069190:-1:exon
so has part: feature:3067878-3068120:-1:exon
so has part: feature:3067120-3067245:-1:exon
so has part: feature:3066709-3066808:-1:exon
so has part: feature:3065174-3065218:-1:exon
so has part: feature:3064725-3064848:-1:exon
so has part: feature:3063016-3063119:-1:exon
so has part: feature:3062131-3062227:-1:exon
so has part: feature:3061218-3061367:-1:exon
so has part: feature:3060468-3060642:-1:exon
so has part: feature:3059529-3059593:-1:exon

XP_010716056.1
type: Protein
SIO_000068: ncbiprotein

position:3059529:-1
position: 3059529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3070420:-1
position: 3070420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070316-3070420:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3069043-3069190:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3067878-3068120:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3067120-3067245:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3066709-3066808:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3065174-3065218:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3064725-3064848:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3063016-3063119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3062131-3062227:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3061218-3061367:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3060468-3060642:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3059529-3059593:-1:exon

TDRD12
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TDRD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3070952..3081453
location: region:3070952-3081453:1
so has part: feature:3070952-3081453:1:exon
subclass of: SO_0000010

104913007
type: Gene
SIO_000068: ncbigene

position:3070952:1
position: 3070952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3081453:1
position: 3081453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070952-3081453:1:exon

TDRD12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TDRD12
product: tudor domain containing 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555392.1
SIO_010081: TDRD12
subclass of: SO_0000673
so part of: TDRD12
location: join(3070952..3070990,3074190..3074381,3075485..3075613,3076061..3076178,3076903..3077039,3077126..3077331,3077477..3077576,3077970..3078157,3078481..3078685,3079182..3079274,3080939..3081453)
location: region:3070952-3081453:1
so has part: feature:3070952-3070990:1:exon
so has part: feature:3074190-3074381:1:exon
so has part: feature:3075485-3075613:1:exon
so has part: feature:3076061-3076178:1:exon
so has part: feature:3076903-3077039:1:exon
so has part: feature:3077126-3077331:1:exon
so has part: feature:3077477-3077576:1:exon
so has part: feature:3077970-3078157:1:exon
so has part: feature:3078481-3078685:1:exon
so has part: feature:3079182-3079274:1:exon
so has part: feature:3080939-3081453:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3070952-3070990:1:exon

position:3070990:1
position: 3070990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3074190-3074381:1:exon

position:3074190:1
position: 3074190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074381:1
position: 3074381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3075485-3075613:1:exon

position:3075485:1
position: 3075485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3075613:1
position: 3075613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3076061-3076178:1:exon

position:3076061:1
position: 3076061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3076178:1
position: 3076178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3076903-3077039:1:exon

position:3076903:1
position: 3076903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3077039:1
position: 3077039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3077126-3077331:1:exon

position:3077126:1
position: 3077126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3077331:1
position: 3077331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3077477-3077576:1:exon

position:3077477:1
position: 3077477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3077576:1
position: 3077576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3077970-3078157:1:exon

position:3077970:1
position: 3077970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3078157:1
position: 3078157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3078481-3078685:1:exon

position:3078481:1
position: 3078481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3078685:1
position: 3078685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3079182-3079274:1:exon

position:3079182:1
position: 3079182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3079274:1
position: 3079274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3080939-3081453:1:exon

position:3080939:1
position: 3080939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TDRD12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TDRD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ATP-dependent RNA helicase TDRD12
translation: MEYCFAAKQTVIQVSVILGYYKKNLFNEEWKYSPHQIIAVGTQWNKHIGILIKEFMNDPYIVITALEEASIYGNVQQVVQHCVSSERTAVLLKTMDFTPNNLQKVLVFTNSVDEVEIVHKALKSNSIFAFKIHKEMDFNFKDFLEHWTKRFSSGSRVVLVLTDDCMQFLEITDASCVIHFGFPSSPTIFGQRLYSMSDNFHTMIKDSSDQDHRQARSVIMLTENSECHTVGILRFLERAEADIPPGLAGVLEAEEKKKFARPLCIYLKMFGNCKNRTVCPDRHQINLQTDMLQNMASKTIQTSGYVTVLPLHVVSATNYFGRIVDKQKDQYTILAGEINEYFNETSNRVVAQKVEKLALYGFCEKTVFHRVQVIETSSKEEENFNIKIKYVDEGRTSQVQSSQLLHLPARFQHLPPQAVEFVVCRVKPIDNDTEWNPRVTRYIHQKIERKPHEAKVVLSLGNTVWIDPMVRVTRLSDLKMYVNEYSVRSEILSTGLGTDNPEHILQLQKLCEHVKLFSHTKNLELL
SIO_010081: TDRD12
subclass of: SO_0000673
so part of: TDRD12
location: join(3070952..3070990,3074190..3074381,3075485..3075613,3076061..3076178,3076903..3077039,3077126..3077331,3077477..3077576,3077970..3078157,3078481..3078685,3079182..3079274,3080939..3081112)
location: region:3070952-3081112:1
so has part: feature:3070952-3070990:1:exon
so has part: feature:3074190-3074381:1:exon
so has part: feature:3075485-3075613:1:exon
so has part: feature:3076061-3076178:1:exon
so has part: feature:3076903-3077039:1:exon
so has part: feature:3077126-3077331:1:exon
so has part: feature:3077477-3077576:1:exon
so has part: feature:3077970-3078157:1:exon
so has part: feature:3078481-3078685:1:exon
so has part: feature:3079182-3079274:1:exon
so has part: feature:3080939-3081112:1:exon

XP_031411252.1
type: Protein
SIO_000068: ncbiprotein

position:3081112:1
position: 3081112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3070952-3070990:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3074190-3074381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3075485-3075613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3076061-3076178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3076903-3077039:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3077126-3077331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3077477-3077576:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3077970-3078157:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3078481-3078685:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3079182-3079274:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3080939-3081112:1:exon

LOC109369759
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369759
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3081930..3086317)
location: region:3081930-3086317:-1
so has part: feature:3081930-3086317:-1:exon
subclass of: SO_0000011

109369759
type: Gene
SIO_000068: ncbigene

position:3081930:-1
position: 3081930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3086317:-1
position: 3086317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3081930-3086317:-1:exon

LOC109369759
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369759
product: uncharacterized LOC109369759
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002119214.2
SIO_010081: LOC109369759
subclass of: SO_0000673
so part of: LOC109369759
location: complement(join(3081930..3082014,3083654..3083707,3086108..3086317))
location: region:3081930-3086317:-1
so has part: feature:3086108-3086317:-1:exon
so has part: feature:3083654-3083707:-1:exon
so has part: feature:3081930-3082014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3086108-3086317:-1:exon

position:3086108:-1
position: 3086108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3083654-3083707:-1:exon

position:3083654:-1
position: 3083654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3083707:-1
position: 3083707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3081930-3082014:-1:exon

position:3082014:-1
position: 3082014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100541467
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100541467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3082067..3084606
location: region:3082067-3084606:1
so has part: feature:3082067-3084606:1:exon
subclass of: SO_0000010

100541467
type: Gene
SIO_000068: ncbigene

position:3082067:1
position: 3082067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3084606:1
position: 3084606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3082067-3084606:1:exon

LOC100541467
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100541467
product: nucleoside diphosphate-linked moiety X motif 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010717965.3
SIO_010081: LOC100541467
subclass of: SO_0000673
so part of: LOC100541467
location: join(3082067..3082433,3083120..3084606)
location: region:3082067-3084606:1
so has part: feature:3082067-3082433:1:exon
so has part: feature:3083120-3084606:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3082067-3082433:1:exon

position:3082433:1
position: 3082433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3083120-3084606:1:exon

position:3083120:1
position: 3083120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100541467
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100541467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoside diphosphate-linked moiety X motif 19
translation: MQWSSPPEAIERFKSQEIWLAPPQFYELCRLCNFSSLNDLHKFNSDRALEGCERWLPVTLTAADGFIQLLPGDELYPEDPDYTGEKKITLSTDKTVEDLMKEGSIFHRIVIKNTNTLAVYVNIQAKYKHMNPLMINTDSSSYNSRL
SIO_010081: LOC100541467
subclass of: SO_0000673
so part of: LOC100541467
location: join(3082220..3082433,3083120..3083346)
location: region:3082220-3083346:1
so has part: feature:3082220-3082433:1:exon
so has part: feature:3083120-3083346:1:exon

XP_010716267.1
type: Protein
SIO_000068: ncbiprotein

position:3082220:1
position: 3082220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3083346:1
position: 3083346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3082220-3082433:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3083120-3083346:1:exon

LOC100541619
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100541619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3086335..3098990
location: region:3086335-3098990:1
so has part: feature:3086335-3098990:1:exon
subclass of: SO_0000010

100541619
type: Gene
SIO_000068: ncbigene

position:3086335:1
position: 3086335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3098990:1
position: 3098990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3086335-3098990:1:exon

LOC100541619
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100541619
product: putative ATP-dependent RNA helicase TDRD12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019619670.2
SIO_010081: LOC100541619
subclass of: SO_0000673
so part of: LOC100541619
location: join(3086335..3086438,3087478..3087530,3088307..3088462,3088773..3088909,3089939..3090058,3091278..3091333,3092714..3092799,3094201..3094399,3094940..3095016,3096007..3096111,3096491..3096676,3097309..3097462,3098362..3098597,3098736..3098990)
location: region:3086335-3098990:1
so has part: feature:3086335-3086438:1:exon
so has part: feature:3087478-3087530:1:exon
so has part: feature:3088307-3088462:1:exon
so has part: feature:3088773-3088909:1:exon
so has part: feature:3089939-3090058:1:exon
so has part: feature:3091278-3091333:1:exon
so has part: feature:3092714-3092799:1:exon
so has part: feature:3094201-3094399:1:exon
so has part: feature:3094940-3095016:1:exon
so has part: feature:3096007-3096111:1:exon
so has part: feature:3096491-3096676:1:exon
so has part: feature:3097309-3097462:1:exon
so has part: feature:3098362-3098597:1:exon
so has part: feature:3098736-3098990:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3086335-3086438:1:exon

position:3086438:1
position: 3086438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3087478-3087530:1:exon

position:3087478:1
position: 3087478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3087530:1
position: 3087530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3088307-3088462:1:exon

position:3088307:1
position: 3088307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3088462:1
position: 3088462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3088773-3088909:1:exon

position:3088773:1
position: 3088773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3088909:1
position: 3088909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3089939-3090058:1:exon

position:3089939:1
position: 3089939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3090058:1
position: 3090058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3091278-3091333:1:exon

position:3091278:1
position: 3091278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3091333:1
position: 3091333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3092714-3092799:1:exon

position:3092714:1
position: 3092714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092799:1
position: 3092799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3094201-3094399:1:exon

position:3094201:1
position: 3094201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3094399:1
position: 3094399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3094940-3095016:1:exon

position:3094940:1
position: 3094940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3095016:1
position: 3095016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3096007-3096111:1:exon

position:3096007:1
position: 3096007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3096111:1
position: 3096111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3096491-3096676:1:exon

position:3096491:1
position: 3096491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3096676:1
position: 3096676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3097309-3097462:1:exon

position:3097309:1
position: 3097309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3097462:1
position: 3097462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3098362-3098597:1:exon

position:3098362:1
position: 3098362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3098597:1
position: 3098597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3098736-3098990:1:exon

position:3098736:1
position: 3098736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100541619
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100541619
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative ATP-dependent RNA helicase TDRD12
translation: MAKVFTSLRESITLRYKVRIGITAKILFLIVVLKKTQRLGIMEVFVLRIEDPGCFWVTMKGCGPHVVDEIEYKKLNAEMNQFYDKACDDEVKPITLEKDQLCVVFSEELKCWCRAIVKSIMYCADHYQIECFLVDYAKYTFVKSKDVRVAVEGFMQIPFRAKKCGLYCTKPVTLHVNLCEDTAKIVPAKRWDNAATRYFQSLLEATTQIKAKLCSVEDNTFHVILYVTVEDEKVCINDDLVLKKFARFEEAKENIRSPTKERDNQTSLNVDFPPVEIVNPALAFRPVWLQEKVPMNLEAGHTVLSSSVEKTYKRSNMDLSENNESRFQNLREERSFVFLSNKIEPTSILEKAPLHDNLKKELAQDKFLGPNFTESYSWPAIARGCDVVAISYQGNDPFLYIPPVLAFLEVEGCYKALPKRNGPLVLILCPGWRKAQLVFEVLKKYSRCSRLIRPMLVILGKKKEEAEKVKIQGCEIIVTTPYSLLRLYEYHLFLFSGLCHLILDEIEVLFSEAAEQVSGLCILMIKCLSVLMPLTVLKTGWQYRYQLPSNPVLCRHLGRVPDIWALQEWSNWLTPVGRAGRGGRRYDTAFYLCCLGTRPQHTSQDDQEIAAFLVRAAGAARAAPRSVFHLAATRAP
SIO_010081: LOC100541619
subclass of: SO_0000673
so part of: LOC100541619
location: join(3086348..3086438,3087478..3087530,3088307..3088462,3088773..3088909,3089939..3090058,3091278..3091333,3092714..3092799,3094201..3094399,3094940..3095016,3096007..3096111,3096491..3096676,3097309..3097462,3098362..3098597,3098736..3098990)
location: region:3086348-3098990:1
so has part: feature:3086348-3086438:1:exon
so has part: feature:3087478-3087530:1:exon
so has part: feature:3088307-3088462:1:exon
so has part: feature:3088773-3088909:1:exon
so has part: feature:3089939-3090058:1:exon
so has part: feature:3091278-3091333:1:exon
so has part: feature:3092714-3092799:1:exon
so has part: feature:3094201-3094399:1:exon
so has part: feature:3094940-3095016:1:exon
so has part: feature:3096007-3096111:1:exon
so has part: feature:3096491-3096676:1:exon
so has part: feature:3097309-3097462:1:exon
so has part: feature:3098362-3098597:1:exon
so has part: feature:3098736-3098990:1:exon

XP_019475215.2
type: Protein
SIO_000068: ncbiprotein

position:3086348:1
position: 3086348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3086348-3086438:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3087478-3087530:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3088307-3088462:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3088773-3088909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3089939-3090058:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3091278-3091333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3092714-3092799:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3094201-3094399:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3094940-3095016:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3096007-3096111:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3096491-3096676:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3097309-3097462:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3098362-3098597:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3098736-3098990:1:exon

RGS9BP
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RGS9BP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3099109..3105122
location: region:3099109-3105122:1
so has part: feature:3099109-3105122:1:exon
subclass of: SO_0000010

100541312
type: Gene
SIO_000068: ncbigene

position:3099109:1
position: 3099109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3105122:1
position: 3105122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3099109-3105122:1:exon

RGS9BP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RGS9BP
product: regulator of G protein signaling 9 binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010717755.3
SIO_010081: RGS9BP
subclass of: SO_0000673
so part of: RGS9BP
location: 3099109..3105122
location: region:3099109-3105122:1
so has part: feature:3099109-3105122:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3099109-3105122:1:exon

RGS9BP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RGS9BP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 9-binding protein
translation: MVKEECKALLDALSRVTACYRHMVLTIGGTSDSQNLREELKKTRQKAQELAVANRNKLTTVLRDKTVSKEDKAEFERLWVIFSTCLEILEIDMRRALELGHEFPLNVPKKHLIQTGMSGGTSGVAARAMSVQNMKYEAEHNIDVVDLKDLENEINQVGEMMYEMEMKVNVPQWTVEAKQDPGAELKSTISVGASSIGMISVEENKSFCDISKVLAGIIFSAVLIIAIVLAVCVVKLS
SIO_010081: RGS9BP
subclass of: SO_0000673
so part of: RGS9BP
location: 3099161..3099874
location: region:3099161-3099874:1
so has part: feature:3099161-3099874:1:exon

XP_010716057.1
type: Protein
SIO_000068: ncbiprotein

position:3099161:1
position: 3099161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3099874:1
position: 3099874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3099161-3099874:1:exon

PDCD5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PDCD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3109253..3112264
location: region:3109253-3112264:1
so has part: feature:3109253-3112264:1:exon
subclass of: SO_0000010

100540395
type: Gene
SIO_000068: ncbigene

position:3109253:1
position: 3109253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3112264:1
position: 3112264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3109253-3112264:1:exon

PDCD5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PDCD5
product: programmed cell death 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010717756.2
SIO_010081: PDCD5
subclass of: SO_0000673
so part of: PDCD5
location: join(3109253..3109325,3109603..3109640,3110316..3110377,3110794..3110885,3111109..3111180,3111591..3112264)
location: region:3109253-3112264:1
so has part: feature:3109253-3109325:1:exon
so has part: feature:3109603-3109640:1:exon
so has part: feature:3110316-3110377:1:exon
so has part: feature:3110794-3110885:1:exon
so has part: feature:3111109-3111180:1:exon
so has part: feature:3111591-3112264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3109253-3109325:1:exon

position:3109325:1
position: 3109325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3109603-3109640:1:exon

position:3109603:1
position: 3109603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3109640:1
position: 3109640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3110316-3110377:1:exon

position:3110316:1
position: 3110316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3110377:1
position: 3110377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3110794-3110885:1:exon

position:3110794:1
position: 3110794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3110885:1
position: 3110885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3111109-3111180:1:exon

position:3111109:1
position: 3111109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3111180:1
position: 3111180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3111591-3112264:1:exon

position:3111591:1
position: 3111591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDCD5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PDCD5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 5
translation: MADEELAALRQQRLAELQAKHGDTSDPSQQEAKQREAEIRNTILAQVLDQAARARLSNLALVKPDKAKAVENYLIQMARFGQLPGKVSEQGLIEILEKVSQQTEKKTTVKFNRRKVLDSDEEDDY
SIO_010081: PDCD5
subclass of: SO_0000673
so part of: PDCD5
location: join(3109260..3109325,3109603..3109640,3110316..3110377,3110794..3110885,3111109..3111180,3111591..3111638)
location: region:3109260-3111638:1
so has part: feature:3109260-3109325:1:exon
so has part: feature:3109603-3109640:1:exon
so has part: feature:3110316-3110377:1:exon
so has part: feature:3110794-3110885:1:exon
so has part: feature:3111109-3111180:1:exon
so has part: feature:3111591-3111638:1:exon

XP_010716058.1
type: Protein
SIO_000068: ncbiprotein

position:3109260:1
position: 3109260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3111638:1
position: 3111638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3109260-3109325:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3109603-3109640:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3110316-3110377:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3110794-3110885:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3111109-3111180:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3111591-3111638:1:exon

ANKRD27
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ANKRD27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3114398..3155361)
location: region:3114398-3155361:-1
so has part: feature:3114398-3155361:-1:exon
subclass of: SO_0000010

100540550
type: Gene
SIO_000068: ncbigene

position:3114398:-1
position: 3114398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3155361:-1
position: 3155361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3114398-3155361:-1:exon

ANKRD27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ANKRD27
product: ankyrin repeat domain 27, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010717758.3
SIO_010081: ANKRD27
subclass of: SO_0000673
so part of: ANKRD27
location: complement(join(3114398..3116101,3117814..3117886,3118618..3118696,3120040..3120148,3120975..3121136,3121718..3121837,3122180..3122377,3123680..3123802,3127114..3127158,3130378..3130497,3130610..3130669,3130976..3131173,3131540..3131632,3132392..3132507,3133238..3133320,3133746..3133873,3134655..3134747,3138874..3139006,3139803..3139881,3140673..3140794,3141140..3141216,3141295..3141360,3141452..3141505,3141595..3141654,3141964..3142118,3143599..3143755,3144785..3144895,3146330..3146460,3155310..3155361))
location: region:3114398-3155361:-1
so has part: feature:3155310-3155361:-1:exon
so has part: feature:3146330-3146460:-1:exon
so has part: feature:3144785-3144895:-1:exon
so has part: feature:3143599-3143755:-1:exon
so has part: feature:3141964-3142118:-1:exon
so has part: feature:3141595-3141654:-1:exon
so has part: feature:3141452-3141505:-1:exon
so has part: feature:3141295-3141360:-1:exon
so has part: feature:3141140-3141216:-1:exon
so has part: feature:3140673-3140794:-1:exon
so has part: feature:3139803-3139881:-1:exon
so has part: feature:3138874-3139006:-1:exon
so has part: feature:3134655-3134747:-1:exon
so has part: feature:3133746-3133873:-1:exon
so has part: feature:3133238-3133320:-1:exon
so has part: feature:3132392-3132507:-1:exon
so has part: feature:3131540-3131632:-1:exon
so has part: feature:3130976-3131173:-1:exon
so has part: feature:3130610-3130669:-1:exon
so has part: feature:3130378-3130497:-1:exon
so has part: feature:3127114-3127158:-1:exon
so has part: feature:3123680-3123802:-1:exon
so has part: feature:3122180-3122377:-1:exon
so has part: feature:3121718-3121837:-1:exon
so has part: feature:3120975-3121136:-1:exon
so has part: feature:3120040-3120148:-1:exon
so has part: feature:3118618-3118696:-1:exon
so has part: feature:3117814-3117886:-1:exon
so has part: feature:3114398-3116101:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3155310-3155361:-1:exon

position:3155310:-1
position: 3155310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3146330-3146460:-1:exon

position:3146330:-1
position: 3146330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3146460:-1
position: 3146460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3144785-3144895:-1:exon

position:3144785:-1
position: 3144785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3144895:-1
position: 3144895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3143599-3143755:-1:exon

position:3143599:-1
position: 3143599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3143755:-1
position: 3143755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3141964-3142118:-1:exon

position:3141964:-1
position: 3141964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3142118:-1
position: 3142118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3141595-3141654:-1:exon

position:3141595:-1
position: 3141595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3141654:-1
position: 3141654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3141452-3141505:-1:exon

position:3141452:-1
position: 3141452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3141505:-1
position: 3141505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3141295-3141360:-1:exon

position:3141295:-1
position: 3141295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3141360:-1
position: 3141360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3141140-3141216:-1:exon

position:3141140:-1
position: 3141140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3141216:-1
position: 3141216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3140673-3140794:-1:exon

position:3140673:-1
position: 3140673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3140794:-1
position: 3140794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3139803-3139881:-1:exon

position:3139803:-1
position: 3139803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3139881:-1
position: 3139881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3138874-3139006:-1:exon

position:3138874:-1
position: 3138874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3139006:-1
position: 3139006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3134655-3134747:-1:exon

position:3134655:-1
position: 3134655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3134747:-1
position: 3134747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3133746-3133873:-1:exon

position:3133746:-1
position: 3133746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3133873:-1
position: 3133873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3133238-3133320:-1:exon

position:3133238:-1
position: 3133238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3133320:-1
position: 3133320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3132392-3132507:-1:exon

position:3132392:-1
position: 3132392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3132507:-1
position: 3132507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3131540-3131632:-1:exon

position:3131540:-1
position: 3131540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3131632:-1
position: 3131632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3130976-3131173:-1:exon

position:3130976:-1
position: 3130976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3131173:-1
position: 3131173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3130610-3130669:-1:exon

position:3130610:-1
position: 3130610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3130669:-1
position: 3130669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3130378-3130497:-1:exon

position:3130378:-1
position: 3130378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3130497:-1
position: 3130497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3127114-3127158:-1:exon

position:3127114:-1
position: 3127114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3127158:-1
position: 3127158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3123680-3123802:-1:exon

position:3123680:-1
position: 3123680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3123802:-1
position: 3123802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3122180-3122377:-1:exon

position:3122180:-1
position: 3122180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3122377:-1
position: 3122377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3121718-3121837:-1:exon

position:3121718:-1
position: 3121718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3121837:-1
position: 3121837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3120975-3121136:-1:exon

position:3120975:-1
position: 3120975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3121136:-1
position: 3121136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3120040-3120148:-1:exon

position:3120040:-1
position: 3120040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3120148:-1
position: 3120148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:3118618-3118696:-1:exon

position:3118618:-1
position: 3118618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118696:-1
position: 3118696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:3117814-3117886:-1:exon

position:3117814:-1
position: 3117814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3117886:-1
position: 3117886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3114398-3116101:-1:exon

position:3116101:-1
position: 3116101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ANKRD27
product: ankyrin repeat domain 27, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555430.1
SIO_010081: ANKRD27
subclass of: SO_0000673
so part of: ANKRD27
location: complement(join(3114398..3116101,3117366..3117437,3117814..3117886,3118618..3118696,3120040..3120148,3120975..3121136,3121718..3121837,3122180..3122377,3123680..3123802,3127114..3127158,3130378..3130497,3130610..3130669,3130976..3131173,3131540..3131632,3132392..3132507,3133238..3133320,3133746..3133873,3134655..3134747,3138874..3139006,3139803..3139881,3140673..3140794,3141140..3141216,3141295..3141360,3141452..3141505,3141595..3141654,3141964..3142118,3143599..3143755,3144785..3144895,3146330..3146460,3152138..3152234))
location: region:3114398-3152234:-1
so has part: feature:3152138-3152234:-1:exon
so has part: feature:3146330-3146460:-1:exon
so has part: feature:3144785-3144895:-1:exon
so has part: feature:3143599-3143755:-1:exon
so has part: feature:3141964-3142118:-1:exon
so has part: feature:3141595-3141654:-1:exon
so has part: feature:3141452-3141505:-1:exon
so has part: feature:3141295-3141360:-1:exon
so has part: feature:3141140-3141216:-1:exon
so has part: feature:3140673-3140794:-1:exon
so has part: feature:3139803-3139881:-1:exon
so has part: feature:3138874-3139006:-1:exon
so has part: feature:3134655-3134747:-1:exon
so has part: feature:3133746-3133873:-1:exon
so has part: feature:3133238-3133320:-1:exon
so has part: feature:3132392-3132507:-1:exon
so has part: feature:3131540-3131632:-1:exon
so has part: feature:3130976-3131173:-1:exon
so has part: feature:3130610-3130669:-1:exon
so has part: feature:3130378-3130497:-1:exon
so has part: feature:3127114-3127158:-1:exon
so has part: feature:3123680-3123802:-1:exon
so has part: feature:3122180-3122377:-1:exon
so has part: feature:3121718-3121837:-1:exon
so has part: feature:3120975-3121136:-1:exon
so has part: feature:3120040-3120148:-1:exon
so has part: feature:3118618-3118696:-1:exon
so has part: feature:3117814-3117886:-1:exon
so has part: feature:3117366-3117437:-1:exon
so has part: feature:3114398-3116101:-1:exon

position:3152234:-1
position: 3152234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3152138-3152234:-1:exon

position:3152138:-1
position: 3152138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3146330-3146460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144785-3144895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3143599-3143755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141964-3142118:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3141595-3141654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141452-3141505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3141295-3141360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3141140-3141216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3140673-3140794:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3139803-3139881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3138874-3139006:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3134655-3134747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3133746-3133873:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3133238-3133320:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3132392-3132507:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3131540-3131632:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3130976-3131173:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3130610-3130669:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3130378-3130497:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3127114-3127158:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3123680-3123802:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3122180-3122377:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3121718-3121837:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3120975-3121136:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3120040-3120148:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3118618-3118696:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3117814-3117886:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3117366-3117437:-1:exon

position:3117366:-1
position: 3117366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3117437:-1
position: 3117437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3114398-3116101:-1:exon

ANKRD27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ANKRD27
product: ankyrin repeat domain 27, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010717759.3
SIO_010081: ANKRD27
subclass of: SO_0000673
so part of: ANKRD27
location: complement(join(3114398..3116101,3117814..3117886,3118618..3118696,3120040..3120148,3120975..3121136,3121718..3121837,3122180..3122377,3123680..3123802,3127114..3127158,3130378..3130497,3130610..3130669,3130976..3131173,3131540..3131632,3132392..3132507,3133238..3133320,3133746..3133873,3134655..3134747,3138874..3139006,3139803..3139881,3140673..3140794,3141140..3141216,3141295..3141360,3141452..3141505,3141595..3141654,3141964..3142118,3143599..3143755,3144785..3144895,3146330..3146460,3152138..3152233))
location: region:3114398-3152233:-1
so has part: feature:3152138-3152233:-1:exon
so has part: feature:3146330-3146460:-1:exon
so has part: feature:3144785-3144895:-1:exon
so has part: feature:3143599-3143755:-1:exon
so has part: feature:3141964-3142118:-1:exon
so has part: feature:3141595-3141654:-1:exon
so has part: feature:3141452-3141505:-1:exon
so has part: feature:3141295-3141360:-1:exon
so has part: feature:3141140-3141216:-1:exon
so has part: feature:3140673-3140794:-1:exon
so has part: feature:3139803-3139881:-1:exon
so has part: feature:3138874-3139006:-1:exon
so has part: feature:3134655-3134747:-1:exon
so has part: feature:3133746-3133873:-1:exon
so has part: feature:3133238-3133320:-1:exon
so has part: feature:3132392-3132507:-1:exon
so has part: feature:3131540-3131632:-1:exon
so has part: feature:3130976-3131173:-1:exon
so has part: feature:3130610-3130669:-1:exon
so has part: feature:3130378-3130497:-1:exon
so has part: feature:3127114-3127158:-1:exon
so has part: feature:3123680-3123802:-1:exon
so has part: feature:3122180-3122377:-1:exon
so has part: feature:3121718-3121837:-1:exon
so has part: feature:3120975-3121136:-1:exon
so has part: feature:3120040-3120148:-1:exon
so has part: feature:3118618-3118696:-1:exon
so has part: feature:3117814-3117886:-1:exon
so has part: feature:3114398-3116101:-1:exon

position:3152233:-1
position: 3152233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3152138-3152233:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3146330-3146460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144785-3144895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3143599-3143755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141964-3142118:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3141595-3141654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141452-3141505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3141295-3141360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3141140-3141216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3140673-3140794:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3139803-3139881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3138874-3139006:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3134655-3134747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3133746-3133873:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3133238-3133320:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3132392-3132507:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3131540-3131632:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3130976-3131173:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3130610-3130669:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3130378-3130497:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3127114-3127158:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3123680-3123802:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3122180-3122377:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3121718-3121837:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3120975-3121136:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3120040-3120148:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3118618-3118696:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3117814-3117886:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3114398-3116101:-1:exon

ANKRD27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ANKRD27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 27 isoform X1
translation: MAMYDEDLLKNPFYLAIQKRRPDLCSKVAEQHGIVLVPCKGSLSSNCLSNCQFESYVLKPLEENFQTLNGKEIFIQGNLVILGTGFNYHLSVPVLFEETFYNEKEESFSILCIAHPLEKTENSNESTASSNLYSLKNIEDVREFLGRHCERFDKYIGSFYRTFKEHERKSLRHYIDSVSALYTKCLQHLLRDSHLKMLAKQEEQMNLIKQAVEMYVHHAIYDLVFKYVGTIEASEDAAFNKITRSLQDLQQKDIGVKPEFSFNIPRAKRELSQLNKCTSPQQKLLCLRKVVQIIMQCPSQRVNMETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRLCSSVKDELGYCLTSIEAAIEYIRQGNLSDRSTESDRLYDKLLLKQRMNFLSQMSTTPIDCLFKHIASGNQEEVERLLSQGDSDKDTVQKMCHPLCYCDKCEKLVSGKLNDPSIVTAFSRDDRGYTPLHIAAICGQTSLVDLLVAKGAIVNATDYHGSTPLHLACQKGYQNVTLLLLHYKANTDGQDNNGNTPLHLACTYGHEDCVKALVYYDVHSCRLDIGNEKGDTPLHIAARWGYQGIIEVLLQNGANPNTQNRMKETSLQCALNSKILSLMELNYLTFERGQSASESPHRSPQHSTETFSRGSSVSSLSSASIDVRQDEVKNSYKEVEKLLRAVADGDLEMVRYLLEWTEEDLEDEDDAVSTLKPEFCHPLCQCSKCGPAQKKFARVPANGLGVNMSNQDGFTPLHMAALHGHSDLVSLLLKHGASISAKNAEHAAPLHLACQKGHSQVVECLMNYNAKQNKKDAYGNTPLIYACLNGHYETTALLLQRGASVNLSNAKGNTALHEAVIGKNEALVDLLLQNGARTHIQNERNCTPADCAEPNSNISKLLETAASYVPASAEEEKECEQHATIKIRRKVNESCEEADDPIRRQHQLVQSINRFNKVKHLRRTITRDKSVPNFDYQFLHQLAIKSFDKTKLKSVDTLDQNKAKIIDAECSGEFMKHDDMIETPCRSKLMHRRHTVNVPLSAESVSGNSLSSPGSPSISQSRDCCDDLLSKR
SIO_010081: ANKRD27
subclass of: SO_0000673
so part of: ANKRD27
location: complement(join(3115826..3116101,3117814..3117886,3118618..3118696,3120040..3120148,3120975..3121136,3121718..3121837,3122180..3122377,3123680..3123802,3127114..3127158,3130378..3130497,3130610..3130669,3130976..3131173,3131540..3131632,3132392..3132507,3133238..3133320,3133746..3133873,3134655..3134747,3138874..3139006,3139803..3139881,3140673..3140794,3141140..3141216,3141295..3141360,3141452..3141505,3141595..3141654,3141964..3142118,3143599..3143755,3144785..3144895,3146330..3146431))
location: region:3115826-3146431:-1
so has part: feature:3146330-3146431:-1:exon
so has part: feature:3144785-3144895:-1:exon
so has part: feature:3143599-3143755:-1:exon
so has part: feature:3141964-3142118:-1:exon
so has part: feature:3141595-3141654:-1:exon
so has part: feature:3141452-3141505:-1:exon
so has part: feature:3141295-3141360:-1:exon
so has part: feature:3141140-3141216:-1:exon
so has part: feature:3140673-3140794:-1:exon
so has part: feature:3139803-3139881:-1:exon
so has part: feature:3138874-3139006:-1:exon
so has part: feature:3134655-3134747:-1:exon
so has part: feature:3133746-3133873:-1:exon
so has part: feature:3133238-3133320:-1:exon
so has part: feature:3132392-3132507:-1:exon
so has part: feature:3131540-3131632:-1:exon
so has part: feature:3130976-3131173:-1:exon
so has part: feature:3130610-3130669:-1:exon
so has part: feature:3130378-3130497:-1:exon
so has part: feature:3127114-3127158:-1:exon
so has part: feature:3123680-3123802:-1:exon
so has part: feature:3122180-3122377:-1:exon
so has part: feature:3121718-3121837:-1:exon
so has part: feature:3120975-3121136:-1:exon
so has part: feature:3120040-3120148:-1:exon
so has part: feature:3118618-3118696:-1:exon
so has part: feature:3117814-3117886:-1:exon
so has part: feature:3115826-3116101:-1:exon

XP_010716060.1
type: Protein
SIO_000068: ncbiprotein

position:3115826:-1
position: 3115826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3146431:-1
position: 3146431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3146330-3146431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3144785-3144895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143599-3143755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3141964-3142118:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141595-3141654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3141452-3141505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141295-3141360:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3141140-3141216:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3140673-3140794:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3139803-3139881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3138874-3139006:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3134655-3134747:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3133746-3133873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3133238-3133320:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3132392-3132507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3131540-3131632:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3130976-3131173:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3130610-3130669:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3130378-3130497:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3127114-3127158:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3123680-3123802:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3122180-3122377:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3121718-3121837:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3120975-3121136:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3120040-3120148:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3118618-3118696:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3117814-3117886:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3115826-3116101:-1:exon

ANKRD27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ANKRD27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 27 isoform X1
translation: MAMYDEDLLKNPFYLAIQKRRPDLCSKVAEQHGIVLVPCKGSLSSNCLSNCQFESYVLKPLEENFQTLNGKEIFIQGNLVILGTGFNYHLSVPVLFEETFYNEKEESFSILCIAHPLEKTENSNESTASSNLYSLKNIEDVREFLGRHCERFDKYIGSFYRTFKEHERKSLRHYIDSVSALYTKCLQHLLRDSHLKMLAKQEEQMNLIKQAVEMYVHHAIYDLVFKYVGTIEASEDAAFNKITRSLQDLQQKDIGVKPEFSFNIPRAKRELSQLNKCTSPQQKLLCLRKVVQIIMQCPSQRVNMETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRLCSSVKDELGYCLTSIEAAIEYIRQGNLSDRSTESDRLYDKLLLKQRMNFLSQMSTTPIDCLFKHIASGNQEEVERLLSQGDSDKDTVQKMCHPLCYCDKCEKLVSGKLNDPSIVTAFSRDDRGYTPLHIAAICGQTSLVDLLVAKGAIVNATDYHGSTPLHLACQKGYQNVTLLLLHYKANTDGQDNNGNTPLHLACTYGHEDCVKALVYYDVHSCRLDIGNEKGDTPLHIAARWGYQGIIEVLLQNGANPNTQNRMKETSLQCALNSKILSLMELNYLTFERGQSASESPHRSPQHSTETFSRGSSVSSLSSASIDVRQDEVKNSYKEVEKLLRAVADGDLEMVRYLLEWTEEDLEDEDDAVSTLKPEFCHPLCQCSKCGPAQKKFARVPANGLGVNMSNQDGFTPLHMAALHGHSDLVSLLLKHGASISAKNAEHAAPLHLACQKGHSQVVECLMNYNAKQNKKDAYGNTPLIYACLNGHYETTALLLQRGASVNLSNAKGNTALHEAVIGKNEALVDLLLQNGARTHIQNERNCTPADCAEPNSNISKLLETAASYVPASAEEEKECEQHATIKIRRKVNESCEEADDPIRRQHQLVQSINRFNKVKHLRRTITRDKSVPNFDYQFLHQLAIKSFDKTKLKSVDTLDQNKAKIIDAECSGEFMKHDDMIETPCRSKLMHRRHTVNVPLSAESVSGNSLSSPGSPSISQSRDCCDDLLSKR
SIO_010081: ANKRD27
subclass of: SO_0000673
so part of: ANKRD27
location: complement(join(3115826..3116101,3117814..3117886,3118618..3118696,3120040..3120148,3120975..3121136,3121718..3121837,3122180..3122377,3123680..3123802,3127114..3127158,3130378..3130497,3130610..3130669,3130976..3131173,3131540..3131632,3132392..3132507,3133238..3133320,3133746..3133873,3134655..3134747,3138874..3139006,3139803..3139881,3140673..3140794,3141140..3141216,3141295..3141360,3141452..3141505,3141595..3141654,3141964..3142118,3143599..3143755,3144785..3144895,3146330..3146431))
location: region:3115826-3146431:-1
so has part: feature:3146330-3146431:-1:exon
so has part: feature:3144785-3144895:-1:exon
so has part: feature:3143599-3143755:-1:exon
so has part: feature:3141964-3142118:-1:exon
so has part: feature:3141595-3141654:-1:exon
so has part: feature:3141452-3141505:-1:exon
so has part: feature:3141295-3141360:-1:exon
so has part: feature:3141140-3141216:-1:exon
so has part: feature:3140673-3140794:-1:exon
so has part: feature:3139803-3139881:-1:exon
so has part: feature:3138874-3139006:-1:exon
so has part: feature:3134655-3134747:-1:exon
so has part: feature:3133746-3133873:-1:exon
so has part: feature:3133238-3133320:-1:exon
so has part: feature:3132392-3132507:-1:exon
so has part: feature:3131540-3131632:-1:exon
so has part: feature:3130976-3131173:-1:exon
so has part: feature:3130610-3130669:-1:exon
so has part: feature:3130378-3130497:-1:exon
so has part: feature:3127114-3127158:-1:exon
so has part: feature:3123680-3123802:-1:exon
so has part: feature:3122180-3122377:-1:exon
so has part: feature:3121718-3121837:-1:exon
so has part: feature:3120975-3121136:-1:exon
so has part: feature:3120040-3120148:-1:exon
so has part: feature:3118618-3118696:-1:exon
so has part: feature:3117814-3117886:-1:exon
so has part: feature:3115826-3116101:-1:exon

XP_010716061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3146330-3146431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3144785-3144895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143599-3143755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3141964-3142118:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141595-3141654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3141452-3141505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141295-3141360:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3141140-3141216:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3140673-3140794:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3139803-3139881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3138874-3139006:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3134655-3134747:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3133746-3133873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3133238-3133320:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3132392-3132507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3131540-3131632:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3130976-3131173:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3130610-3130669:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3130378-3130497:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3127114-3127158:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3123680-3123802:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3122180-3122377:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3121718-3121837:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3120975-3121136:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3120040-3120148:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3118618-3118696:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3117814-3117886:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3115826-3116101:-1:exon

ANKRD27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ANKRD27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 27 isoform X2
translation: MAMYDEDLLKNPFYLAIQKRRPDLCSKVAEQHGIVLVPCKGSLSSNCLSNCQFESYVLKPLEENFQTLNGKEIFIQGNLVILGTGFNYHLSVPVLFEETFYNEKEESFSILCIAHPLEKTENSNESTASSNLYSLKNIEDVREFLGRHCERFDKYIGSFYRTFKEHERKSLRHYIDSVSALYTKCLQHLLRDSHLKMLAKQEEQMNLIKQAVEMYVHHAIYDLVFKYVGTIEASEDAAFNKITRSLQDLQQKDIGVKPEFSFNIPRAKRELSQLNKCTSPQQKLLCLRKVVQIIMQCPSQRVNMETMCADDLLSVLLYLLVKTEIPNWMANLSYIKNFRLCSSVKDELGYCLTSIEAAIEYIRQGNLSDRSTESDRLYDKLLLKQRMNFLSQMSTTPIDCLFKHIASGNQEEVERLLSQGDSDKDTVQKMCHPLCYCDKCEKLVSGKLNDPSIVTAFSRDDRGYTPLHIAAICGQTSLVDLLVAKGAIVNATDYHGSTPLHLACQKGYQNVTLLLLHYKANTDGQDNNGNTPLHLACTYGHEDCVKALVYYDVHSCRLDIGNEKGDTPLHIAARWGYQGIIEVLLQNGANPNTQNRMKETSLQCALNSKILSLMELNYLTFERGQSASESPHRSPQHSTETFSRGSSVSSLSSASIDVRQDEVKNSYKEVEKLLRAVADGDLEMVRYLLEWTEEDLEDEDDAVSTLKPEFCHPLCQCSKCGPAQKKFARVPANGLGVNMSNQDGFTPLHMAALHGHSDLVSLLLKHGASISAKNAEHAAPLHLACQKGHSQVVECLMNYNAKQNKKDAYGNTPLIYACLNGHYETTALLLQRGASVNLSNAKGNTALHEAVIGKNEALVDLLLQNGARTHIQNERNCTPADCAEPNSNISKLLETAASYVPASAEEEKECEQHATIKIRRKVNESCEEADDPIRRQHQLVQSINRFNKVKHLRRTITRDKSVPNFDYQFLHQVETFHMGDSKMDVALSAVSQLYVVLAIKSFDKTKLKSVDTLDQNKAKIIDAECSGEFMKHDDMIETPCRSKLMHRRHTVNVPLSAESVSGNSLSSPGSPSISQSRDCCDDLLSKR
SIO_010081: ANKRD27
subclass of: SO_0000673
so part of: ANKRD27
location: complement(join(3115826..3116101,3117366..3117437,3117814..3117886,3118618..3118696,3120040..3120148,3120975..3121136,3121718..3121837,3122180..3122377,3123680..3123802,3127114..3127158,3130378..3130497,3130610..3130669,3130976..3131173,3131540..3131632,3132392..3132507,3133238..3133320,3133746..3133873,3134655..3134747,3138874..3139006,3139803..3139881,3140673..3140794,3141140..3141216,3141295..3141360,3141452..3141505,3141595..3141654,3141964..3142118,3143599..3143755,3144785..3144895,3146330..3146431))
location: region:3115826-3146431:-1
so has part: feature:3146330-3146431:-1:exon
so has part: feature:3144785-3144895:-1:exon
so has part: feature:3143599-3143755:-1:exon
so has part: feature:3141964-3142118:-1:exon
so has part: feature:3141595-3141654:-1:exon
so has part: feature:3141452-3141505:-1:exon
so has part: feature:3141295-3141360:-1:exon
so has part: feature:3141140-3141216:-1:exon
so has part: feature:3140673-3140794:-1:exon
so has part: feature:3139803-3139881:-1:exon
so has part: feature:3138874-3139006:-1:exon
so has part: feature:3134655-3134747:-1:exon
so has part: feature:3133746-3133873:-1:exon
so has part: feature:3133238-3133320:-1:exon
so has part: feature:3132392-3132507:-1:exon
so has part: feature:3131540-3131632:-1:exon
so has part: feature:3130976-3131173:-1:exon
so has part: feature:3130610-3130669:-1:exon
so has part: feature:3130378-3130497:-1:exon
so has part: feature:3127114-3127158:-1:exon
so has part: feature:3123680-3123802:-1:exon
so has part: feature:3122180-3122377:-1:exon
so has part: feature:3121718-3121837:-1:exon
so has part: feature:3120975-3121136:-1:exon
so has part: feature:3120040-3120148:-1:exon
so has part: feature:3118618-3118696:-1:exon
so has part: feature:3117814-3117886:-1:exon
so has part: feature:3117366-3117437:-1:exon
so has part: feature:3115826-3116101:-1:exon

XP_031411290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3146330-3146431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3144785-3144895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3143599-3143755:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3141964-3142118:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141595-3141654:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3141452-3141505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141295-3141360:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3141140-3141216:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3140673-3140794:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3139803-3139881:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3138874-3139006:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3134655-3134747:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3133746-3133873:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3133238-3133320:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3132392-3132507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3131540-3131632:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3130976-3131173:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3130610-3130669:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3130378-3130497:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3127114-3127158:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3123680-3123802:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3122180-3122377:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3121718-3121837:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3120975-3121136:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3120040-3120148:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3118618-3118696:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3117814-3117886:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3117366-3117437:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3115826-3116101:-1:exon

ANKRD27
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: ANKRD27
product: ankyrin repeat domain 27, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002119215.2
SIO_010081: ANKRD27
so part of: ANKRD27
location: complement(join(3116025..3116101,3117167..3117437,3117814..3117886,3118618..3118696,3120040..3120148,3120975..3121136,3121718..3121837,3122180..3122377,3123680..3123802,3127114..3127158,3130378..3130497,3130610..3130669,3130976..3131173,3131540..3131632,3132392..3132507,3133238..3133320,3133746..3133873,3134655..3134747,3138874..3139006,3139803..3139881,3140673..3140794,3141140..3141216,3141295..3141360,3141452..3141505,3141595..3141654,3141964..3142118,3143599..3143755,3144785..3144895,3146330..3146460,3152138..3152234))
location: region:3116025-3152234:-1
so has part: feature:3152138-3152234:-1:exon
so has part: feature:3146330-3146460:-1:exon
so has part: feature:3144785-3144895:-1:exon
so has part: feature:3143599-3143755:-1:exon
so has part: feature:3141964-3142118:-1:exon
so has part: feature:3141595-3141654:-1:exon
so has part: feature:3141452-3141505:-1:exon
so has part: feature:3141295-3141360:-1:exon
so has part: feature:3141140-3141216:-1:exon
so has part: feature:3140673-3140794:-1:exon
so has part: feature:3139803-3139881:-1:exon
so has part: feature:3138874-3139006:-1:exon
so has part: feature:3134655-3134747:-1:exon
so has part: feature:3133746-3133873:-1:exon
so has part: feature:3133238-3133320:-1:exon
so has part: feature:3132392-3132507:-1:exon
so has part: feature:3131540-3131632:-1:exon
so has part: feature:3130976-3131173:-1:exon
so has part: feature:3130610-3130669:-1:exon
so has part: feature:3130378-3130497:-1:exon
so has part: feature:3127114-3127158:-1:exon
so has part: feature:3123680-3123802:-1:exon
so has part: feature:3122180-3122377:-1:exon
so has part: feature:3121718-3121837:-1:exon
so has part: feature:3120975-3121136:-1:exon
so has part: feature:3120040-3120148:-1:exon
so has part: feature:3118618-3118696:-1:exon
so has part: feature:3117814-3117886:-1:exon
so has part: feature:3117167-3117437:-1:exon
so has part: feature:3116025-3116101:-1:exon

position:3116025:-1
position: 3116025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3152138-3152234:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3146330-3146460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144785-3144895:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3143599-3143755:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141964-3142118:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3141595-3141654:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3141452-3141505:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3141295-3141360:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3141140-3141216:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3140673-3140794:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3139803-3139881:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3138874-3139006:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3134655-3134747:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3133746-3133873:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3133238-3133320:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3132392-3132507:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3131540-3131632:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3130976-3131173:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3130610-3130669:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3130378-3130497:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3127114-3127158:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3123680-3123802:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3122180-3122377:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3121718-3121837:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3120975-3121136:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3120040-3120148:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3118618-3118696:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3117814-3117886:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3117167-3117437:-1:exon

position:3117167:-1
position: 3117167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3116025-3116101:-1:exon

LOC109369760
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369760
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3156289..3158523)
location: region:3156289-3158523:-1
so has part: feature:3156289-3158523:-1:exon
subclass of: SO_0000011

109369760
type: Gene
SIO_000068: ncbigene

position:3156289:-1
position: 3156289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3158523:-1
position: 3158523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3156289-3158523:-1:exon

LOC109369760
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369760
product: uncharacterized LOC109369760
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002119216.2
SIO_010081: LOC109369760
subclass of: SO_0000673
so part of: LOC109369760
location: complement(join(3156289..3156566,3156666..3156767,3157553..3157617,3158039..3158523))
location: region:3156289-3158523:-1
so has part: feature:3158039-3158523:-1:exon
so has part: feature:3157553-3157617:-1:exon
so has part: feature:3156666-3156767:-1:exon
so has part: feature:3156289-3156566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3158039-3158523:-1:exon

position:3158039:-1
position: 3158039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3157553-3157617:-1:exon

position:3157553:-1
position: 3157553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3157617:-1
position: 3157617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3156666-3156767:-1:exon

position:3156666:-1
position: 3156666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3156767:-1
position: 3156767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3156289-3156566:-1:exon

position:3156566:-1
position: 3156566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100541159
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100541159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3162331..3176296)
location: region:3162331-3176296:-1
so has part: feature:3162331-3176296:-1:exon
subclass of: SO_0000010

100541159
type: Gene
SIO_000068: ncbigene

position:3162331:-1
position: 3162331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3176296:-1
position: 3176296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3162331-3176296:-1:exon

LOC100541159
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100541159
product: neural-cadherin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031555393.1
SIO_010081: LOC100541159
subclass of: SO_0000673
so part of: LOC100541159
location: complement(join(3162331..3162588,3163176..3163343,3163761..3163933,3164792..3164962,3165668..3165836,3166758..3166930,3167615..3167757,3169691..3169940,3171137..3171248,3172353..3172554,3174909..3175134,3175952..3176296))
location: region:3162331-3176296:-1
so has part: feature:3175952-3176296:-1:exon
so has part: feature:3174909-3175134:-1:exon
so has part: feature:3172353-3172554:-1:exon
so has part: feature:3171137-3171248:-1:exon
so has part: feature:3169691-3169940:-1:exon
so has part: feature:3167615-3167757:-1:exon
so has part: feature:3166758-3166930:-1:exon
so has part: feature:3165668-3165836:-1:exon
so has part: feature:3164792-3164962:-1:exon
so has part: feature:3163761-3163933:-1:exon
so has part: feature:3163176-3163343:-1:exon
so has part: feature:3162331-3162588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3175952-3176296:-1:exon

position:3175952:-1
position: 3175952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3174909-3175134:-1:exon

position:3174909:-1
position: 3174909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3175134:-1
position: 3175134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3172353-3172554:-1:exon

position:3172353:-1
position: 3172353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3172554:-1
position: 3172554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3171137-3171248:-1:exon

position:3171137:-1
position: 3171137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3171248:-1
position: 3171248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3169691-3169940:-1:exon

position:3169691:-1
position: 3169691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3169940:-1
position: 3169940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3167615-3167757:-1:exon

position:3167615:-1
position: 3167615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3167757:-1
position: 3167757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3166758-3166930:-1:exon

position:3166758:-1
position: 3166758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3166930:-1
position: 3166930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3165668-3165836:-1:exon

position:3165668:-1
position: 3165668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3165836:-1
position: 3165836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3164792-3164962:-1:exon

position:3164792:-1
position: 3164792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3164962:-1
position: 3164962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3163761-3163933:-1:exon

position:3163761:-1
position: 3163761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3163933:-1
position: 3163933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3163176-3163343:-1:exon

position:3163176:-1
position: 3163176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3163343:-1
position: 3163343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3162331-3162588:-1:exon

position:3162588:-1
position: 3162588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100541159
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100541159
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neural-cadherin-like
translation: MDVNDNVPEWAMKPFPFLAVVSPQATEGTEVYKLLAVDADEGINGTVEYFLLEGGEGRFQVERDTGWIKTTGLPLVRNKEYLLTVLAADKLGSKGSPASVSVIAGFRPPQFTNTSYLVYVPENTAEGKSFLRVTAVSYQNKSLSYTLLTNPSGLFSIDQATGDISLTQSVDYESDQHQYLLLVRAEENEQFSSAAEVLVVITDVNDCAPEFHQSIYSKASVPETVTTTTALLQVTATDCDSKENAEILYYTLSPDFSITSHGTIFPARELDYERPNHLYEFIIMAVDKGEDPKTGTATVRIHVSNVNDEAPEFSQTIYRSFVSEDAGPNTLVATVNAVDPDGDGVTYDIPSGNQKGNFIVDPKKGLVRLRSSPFPKLQGTEYVLNVTATDDNASGGPHSLTSTAQVIVKIDDVNNNKPVFQKCHYYREHASVLENQPLGTAVLQVEATDADEGANGIVKYGLMHRDGVLPAFRIHPDTGVLTTVQVFDREKQREYPVTVTATDQAAEPLIGMCQINVLILDQNDNDPRFENTRYEYFLREDTRVGTSFLRVTAHDDDYSSNAVITYSIANGETDYLQINPTSGWIFVNQPISQRSSIIRDIIATDGGNRSSKVELVVTVTSAKNQPPQWERGSYEVVIPENTTRDASVLRIKATSPLGDPRVTYNLEEGLVPETNMPVRFYLTPNRDDGSASILVAELLDYETTKNFLLRVRAQNVAAVPLAAFTTIYINVTGV
SIO_010081: LOC100541159
subclass of: SO_0000673
so part of: LOC100541159
location: complement(join(3162331..3162588,3163176..3163343,3163761..3163933,3164792..3164962,3165668..3165836,3166758..3166930,3167615..3167757,3169691..3169940,3171137..3171248,3172353..3172554,3174909..3175134,3175952..3176111))
location: region:3162331-3176111:-1
so has part: feature:3175952-3176111:-1:exon
so has part: feature:3174909-3175134:-1:exon
so has part: feature:3172353-3172554:-1:exon
so has part: feature:3171137-3171248:-1:exon
so has part: feature:3169691-3169940:-1:exon
so has part: feature:3167615-3167757:-1:exon
so has part: feature:3166758-3166930:-1:exon
so has part: feature:3165668-3165836:-1:exon
so has part: feature:3164792-3164962:-1:exon
so has part: feature:3163761-3163933:-1:exon
so has part: feature:3163176-3163343:-1:exon
so has part: feature:3162331-3162588:-1:exon

XP_031411253.1
type: Protein
SIO_000068: ncbiprotein

position:3176111:-1
position: 3176111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3175952-3176111:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3174909-3175134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3172353-3172554:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3171137-3171248:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3169691-3169940:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3167615-3167757:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3166758-3166930:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3165668-3165836:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3164792-3164962:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3163761-3163933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3163176-3163343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3162331-3162588:-1:exon

LOC109369702
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3181431..3194795)
location: region:3181431-3194795:-1
so has part: feature:3181431-3194795:-1:exon
subclass of: SO_0000010

109369702
type: Gene
SIO_000068: ncbigene

position:3181431:-1
position: 3181431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3194795:-1
position: 3194795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3181431-3194795:-1:exon

LOC109369702
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369702
product: neural-cadherin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019619672.1
SIO_010081: LOC109369702
subclass of: SO_0000673
so part of: LOC109369702
location: complement(join(3181431..3181876,3182742..3182956,3183724..3184001,3186686..3186915,3187090..3187274,3188299..3188392,3188990..3190604,3191115..3191398,3191916..3192059,3192761..3192947,3193726..3193853,3194741..3194795))
location: region:3181431-3194795:-1
so has part: feature:3194741-3194795:-1:exon
so has part: feature:3193726-3193853:-1:exon
so has part: feature:3192761-3192947:-1:exon
so has part: feature:3191916-3192059:-1:exon
so has part: feature:3191115-3191398:-1:exon
so has part: feature:3188990-3190604:-1:exon
so has part: feature:3188299-3188392:-1:exon
so has part: feature:3187090-3187274:-1:exon
so has part: feature:3186686-3186915:-1:exon
so has part: feature:3183724-3184001:-1:exon
so has part: feature:3182742-3182956:-1:exon
so has part: feature:3181431-3181876:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3194741-3194795:-1:exon

position:3194741:-1
position: 3194741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3193726-3193853:-1:exon

position:3193726:-1
position: 3193726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3193853:-1
position: 3193853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3192761-3192947:-1:exon

position:3192761:-1
position: 3192761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3192947:-1
position: 3192947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3191916-3192059:-1:exon

position:3191916:-1
position: 3191916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3192059:-1
position: 3192059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3191115-3191398:-1:exon

position:3191115:-1
position: 3191115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3191398:-1
position: 3191398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3188990-3190604:-1:exon

position:3188990:-1
position: 3188990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3190604:-1
position: 3190604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3188299-3188392:-1:exon

position:3188299:-1
position: 3188299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3188392:-1
position: 3188392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3187090-3187274:-1:exon

position:3187090:-1
position: 3187090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3187274:-1
position: 3187274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3186686-3186915:-1:exon

position:3186686:-1
position: 3186686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3186915:-1
position: 3186915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3183724-3184001:-1:exon

position:3183724:-1
position: 3183724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3184001:-1
position: 3184001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3182742-3182956:-1:exon

position:3182742:-1
position: 3182742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3182956:-1
position: 3182956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3181431-3181876:-1:exon

position:3181876:-1
position: 3181876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109369702
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369702
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neural-cadherin-like
translation: MSPSYPSYTFVHVKLYLHDVNDNVPFFTSSIYEASVTEGADIGTFVIQVSATDLDLGQNGEITYSMLHDHSGDYTCFRLDSQTGSIYTTSVFDREKKGSYLLEVESVDGSESARPGKHGRPNSDTAYVRVFITDVNDNKPVFTQSVYEVNVDEDQDVGSTVITVNANDEDEGTNAKLRYQITAGNTGGVLGVQPETGAIFIAQPLDYEETKIYEIHLLASDGKWEDYAVTIINVMNKNDESPVFSINEYYGSIIEELDGLPVFVLQVMANDPDNNVDEGDLSYSLHGHGAADIFTIDENTGSIYAHKVLDREERALWRFVVLATDEGGEGLTGFADVIINVWDINDNAPMFTCMPDDCNGSVFENSPADTLVMEMSAVDRDDPNVGLNAVLTYTITENVKNELGSDMFNINPNTGTIRVAGGVIDRERTAIYFLTVEARDGGGLTGTGTATIWIADVNDHVPNFTKEMWQAAIPENSAINSEILRVSATDADGGENAHLTFSIIRGDPDQKFYIENDKEWQCATIRLKKKLDFEKAHERQFNLTIKVEDLDFSSTATCLIEVEDSNDHSPVFHSQLIQTSPVFENMPVGTTVTTVRATDKDSGLNGNIIYSIKSDSDPMRQFVIDQHGHVIVANKLDREVIQKYSLIVQASDQGTPAETGSVTVLINLLDVNDNGPRFEAPYMPIVWENMLSPEIVHMNHSSKLLHAYDPDSKENGPPFTFSLPSDYQNSLDFSLTDNRDDTATVTALRSFDREKQKVFHLPIVITDSGIPVMSSTNTLTITIGDENDNCHESGHKDIYVYSNKGKWSTTVLGEVFAPDQDEWDNKTFLSEGKLFKSFRLNQRTGSLMMVDNAPQGIYNLKIRVSDGLCPDVISTVQIHVKELENEAIQNSATVRLSDITAEEFIQSGEHGKNRCNMFKELLAKMLSVKFSDIIVFGLMNTDGKQADVRFAVHDGSAYYRPEKLHAEMAAFKNEIQSALQVSISQIDVDECRSANCSEGSGCTNHLSVSNIPTVVDAGRVSLVSVTTTISAVCTCAARNRVHQPCSSYAHGPCLNGGMCIDTLNGYRCLCPASFHGPDCQQTKHSFHGNGYAWFRPIRPCFESSLSLEFITAVPDGLLLYSGPLSNPEPGNTENFIAIELSSGIPVLKMSHGSGSVMLQFPSHLNVTDKKWHQLEVRTNDQVSYLIFPFRILAFTYAGT
SIO_010081: LOC109369702
subclass of: SO_0000673
so part of: LOC109369702
location: complement(join(3181692..3181876,3182742..3182956,3183724..3184001,3186686..3186915,3187090..3187274,3188299..3188392,3188990..3190604,3191115..3191398,3191916..3192059,3192761..3192947,3193726..3193853,3194741..3194795))
location: region:3181692-3194795:-1
so has part: feature:3194741-3194795:-1:exon
so has part: feature:3193726-3193853:-1:exon
so has part: feature:3192761-3192947:-1:exon
so has part: feature:3191916-3192059:-1:exon
so has part: feature:3191115-3191398:-1:exon
so has part: feature:3188990-3190604:-1:exon
so has part: feature:3188299-3188392:-1:exon
so has part: feature:3187090-3187274:-1:exon
so has part: feature:3186686-3186915:-1:exon
so has part: feature:3183724-3184001:-1:exon
so has part: feature:3182742-3182956:-1:exon
so has part: feature:3181692-3181876:-1:exon

XP_019475217.1
type: Protein
SIO_000068: ncbiprotein

position:3181692:-1
position: 3181692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3194741-3194795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3193726-3193853:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3192761-3192947:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3191916-3192059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3191115-3191398:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3188990-3190604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3188299-3188392:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3187090-3187274:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3186686-3186915:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3183724-3184001:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3182742-3182956:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3181692-3181876:-1:exon

LOC104912931
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3194517..3212391
location: region:3194517-3212391:1
so has part: feature:3194517-3212391:1:exon
subclass of: SO_0000010

104912931
type: Gene
SIO_000068: ncbigene

position:3194517:1
position: 3194517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3212391:1
position: 3212391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3194517-3212391:1:exon

LOC104912931
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912931
product: probable C-mannosyltransferase DPY19L3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_019619736.1
SIO_010081: LOC104912931
subclass of: SO_0000673
so part of: LOC104912931
location: join(3194517..3194615,3197774..3197856,3203193..3203325,3203998..3204156,3212302..3212391)
location: region:3194517-3212391:1
so has part: feature:3194517-3194615:1:exon
so has part: feature:3197774-3197856:1:exon
so has part: feature:3203193-3203325:1:exon
so has part: feature:3203998-3204156:1:exon
so has part: feature:3212302-3212391:1:exon