Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 12, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 12, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015022.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015022.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000973.2.\nOn Dec 18, 2014 this sequence version replaced NC_015022.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19584067
topology: linear
so has quality: SO_0000987
location: 1..19584067
location: region:1-19584067:1
RO_0002162: 9103

NC_015022
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19584067:1
position: 19584067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19584067:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 12
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 468..567
location: region:468-567:1
so has part: feature:468-567:1:region

position:468:1
position: 468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:567:1
position: 567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468-567:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1200..1299
location: region:1200-1299:1
so has part: feature:1200-1299:1:region

position:1200:1
position: 1200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299:1
position: 1299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1200-1299:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2103..2202
location: region:2103-2202:1
so has part: feature:2103-2202:1:region

position:2103:1
position: 2103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2202:1
position: 2202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2103-2202:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2928..3027
location: region:2928-3027:1
so has part: feature:2928-3027:1:region

position:2928:1
position: 2928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3027:1
position: 3027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2928-3027:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 3624..3723
location: region:3624-3723:1
so has part: feature:3624-3723:1:region

position:3624:1
position: 3624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3723:1
position: 3723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3624-3723:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 4230..4329
location: region:4230-4329:1
so has part: feature:4230-4329:1:region

position:4230:1
position: 4230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4329:1
position: 4329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4230-4329:1:region

TRNAA-CGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRNAA-CGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4602..4673)
location: region:4602-4673:-1
so has part: feature:4602-4673:-1:exon
subclass of: SO_0000663

109369691
type: Gene
SIO_000068: ncbigene

position:4602:-1
position: 4602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4673:-1
position: 4673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4602-4673:-1:exon

TRNAA-CGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
gene: TRNAA-CGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon CGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4639..4641),aa:Ala,seq:cgc)
SIO_010081: TRNAA-CGC
subclass of: SO_0000673
so part of: TRNAA-CGC
location: complement(4602..4673)
location: region:4602-4673:-1
so has part: feature:4602-4673:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4602-4673:-1:exon

TRNAM-CAU
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRNAM-CAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5897..5968)
location: region:5897-5968:-1
so has part: feature:5897-5968:-1:exon
subclass of: SO_0000663

109369692
type: Gene
SIO_000068: ncbigene

position:5897:-1
position: 5897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5968:-1
position: 5968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5897-5968:-1:exon

TRNAM-CAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
gene: TRNAM-CAU
product: tRNA-Met
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA methionine (anticodon CAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5934..5936),aa:Met,seq:cat)
SIO_010081: TRNAM-CAU
subclass of: SO_0000673
so part of: TRNAM-CAU
location: complement(5897..5968)
location: region:5897-5968:-1
so has part: feature:5897-5968:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5897-5968:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 6109..6208
location: region:6109-6208:1
so has part: feature:6109-6208:1:region

position:6109:1
position: 6109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6208:1
position: 6208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6109-6208:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 7329..7428
location: region:7329-7428:1
so has part: feature:7329-7428:1:region

position:7329:1
position: 7329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7428:1
position: 7428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7329-7428:1:region

LOC100550096
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100550096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14230..15198
location: region:14230-15198:1
so has part: feature:14230-15198:1:exon
subclass of: SO_0000010

100550096
type: Gene
SIO_000068: ncbigene

position:14230:1
position: 14230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15198:1
position: 15198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14230-15198:1:exon

LOC100550096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100550096
product: olfactory receptor 6B1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003209291.1
SIO_010081: LOC100550096
subclass of: SO_0000673
so part of: LOC100550096
location: 14230..15198
location: region:14230-15198:1
so has part: feature:14230-15198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14230-15198:1:exon

LOC100550096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100550096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 6B1-like
translation: MEENSTQTNMFLLLGFPGLTDFKVLLFTVLLLMYIVTVVENVLIISLIKTNHELCKPMYFFLGQLSFIEVWYISVTVPKLLANFIAEDRSISFAGCMTQLFFFISFMCTECVLLSAMAYDRCVAICQPLRYLLIMTYQMCACLIALSWFTGFTVSLIKISFISQLEFCSSHVINHFFCDISPVLHLACTDMSVAEMVDFVLALFILLVPLSIIVVSYLLIITTILHIPTTQSKKKAFSTCASHLTVVIIFFSATLFMYARPKKISSYDTNKLVSAVYAIVTPMLNPFIYCLRNQELKKAFKKTLSVKITISKVSKIISSLQM
SIO_010081: LOC100550096
subclass of: SO_0000673
so part of: LOC100550096
location: 14230..15198
location: region:14230-15198:1
so has part: feature:14230-15198:1:exon

XP_003209339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14230-15198:1:exon

LOC100550249
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100550249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(19440..26794)
location: region:19440-26794:-1
so has part: feature:19440-26794:-1:exon
subclass of: SO_0000010

100550249
type: Gene
SIO_000068: ncbigene

position:19440:-1
position: 19440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26794:-1
position: 26794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19440-26794:-1:exon

LOC100550249
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100550249
product: olfactory receptor 12D2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 68 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555194.1
SIO_010081: LOC100550249
subclass of: SO_0000673
so part of: LOC100550249
location: complement(join(19440..20410,26788..26794))
location: region:19440-26794:-1
so has part: feature:26788-26794:-1:exon
so has part: feature:19440-20410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26788-26794:-1:exon

position:26788:-1
position: 26788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:19440-20410:-1:exon

position:20410:-1
position: 20410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100550249
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100550249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 12D2-like
translation: MLNHTEVSEFILLGLTDIQGLQYFFFIFFLLLYLTSVLGNGVIVTMVISQPRLHTPMYFFLGNLSCLDIFYSTVTVPKMLTGFLFGRQPISFDGCLAQLYFFHFLGSTEAVLLATMAYDRYVAICNPLCYTLVMNPRTCLLLAMASWFLGFAHAMMHSIMTSQLSFCGHNHIHHFFCDIKPLLNLACSSTSLYMTLLNVVTTSVALGPFILTVLSYLYIISFLFQKVRSQEGRWKPFSTCASHLTVVALLYIPLFFNYTPPSSSSSSRRDMQVSIMYCAITPALNPLIYTLRNQEVRSTLNKTLGRKLFPGGKWQGQDS
SIO_010081: LOC100550249
subclass of: SO_0000673
so part of: LOC100550249
location: complement(19440..20399)
location: region:19440-20399:-1
so has part: feature:19440-20399:-1:exon

XP_031411054.1
type: Protein
SIO_000068: ncbiprotein

position:20399:-1
position: 20399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:19440-20399:-1:exon

LOC104912746
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912746
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 29346..30328
location: region:29346-30328:1
so has part: feature:29346-30328:1:exon
subclass of: SO_0000010

104912746
type: Gene
SIO_000068: ncbigene

position:29346:1
position: 29346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30328:1
position: 30328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29346-30328:1:exon

LOC104912746
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912746
product: olfactory receptor 10A7-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_010717104.2
SIO_010081: LOC104912746
subclass of: SO_0000673
so part of: LOC104912746
location: 29346..30328
location: region:29346-30328:1
so has part: feature:29346-30328:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29346-30328:1:exon

LOC104912746
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912746
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:29726..29728,aa:OTHER)
product: LOW QUALITY PROTEIN: olfactory receptor 10A7-like
translation: MRILEETKPGNQTTVTHFLRWGFVLHGKMXVLFSIVISVTFLATMTGNSLIVVITAIDSALHTPMYYFLKNLALTEICDSLSIVPKMLLILLGERKIISFTACALQLSCAVLFVTCECFLLGVMAYDXQVAICHPLHYGTMMNRDLCFKMAVGSWLSGIPVALLFPTWLFTLPFCGRSKVDHFFCDVSPVLKLVCADTALFELLIFIATVIIVMIPFSLIIISYLLIIHAVLQIPSAVGQRQAFSTCAAHLVVVTLFCSTAGIIHLRPRSSLSSNMKKMVSLSYTVVTPMINPFTYSLRNQKVKQSLRKCINKRLLGKQMIFSLSSS
SIO_010081: LOC104912746
subclass of: SO_0000673
so part of: LOC104912746
location: 29346..30328
location: region:29346-30328:1
so has part: feature:29346-30328:1:exon

XP_010715406.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29346-30328:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 33247..33346
location: region:33247-33346:1
so has part: feature:33247-33346:1:region

position:33247:1
position: 33247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33346:1
position: 33346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33247-33346:1:region

LOC100550402
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100550402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 41682..59259
location: region:41682-59259:1
so has part: feature:41682-59259:1:exon
subclass of: SO_0000010

100550402
type: Gene
SIO_000068: ncbigene

position:41682:1
position: 41682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:59259:1
position: 59259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41682-59259:1:exon

LOC100550402
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100550402
product: olfactory receptor 151-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555186.1
SIO_010081: LOC100550402
subclass of: SO_0000673
so part of: LOC100550402
location: join(41682..42606,51712..51849,58725..58912,59251..59259)
location: region:41682-59259:1
so has part: feature:41682-42606:1:exon
so has part: feature:51712-51849:1:exon
so has part: feature:58725-58912:1:exon
so has part: feature:59251-59259:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:41682-42606:1:exon

position:42606:1
position: 42606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:51712-51849:1:exon

position:51712:1
position: 51712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51849:1
position: 51849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:58725-58912:1:exon

position:58725:1
position: 58725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58912:1
position: 58912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:59251-59259:1:exon

position:59251:1
position: 59251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100550402
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100550402
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 151-like
translation: MSKLEWKNKTVVTEFILLGFGNGPELDYLLFLMFLMTYIMTITGNTFIIALVVANQSLHIPMYFFLGNLACLGICYSSNILPRLLLNYLSGDRRISVVRCFAQYYFFGCLAAAECYLLAVMSYDRYLAVCKPLHYLFLMNHKLCRQLGAASWISGFLFNSILTFLISNLDFCGPNEIEHFFCDCFPVMKLSCSDTHMVGLVTSFVAGVCSLPPFLLTFSSYVYIIITVMRIPSSAGRKKAFSTCSSHLIVVLLFYWSILAVYVLPYHSIQISPNNVFSIFYTILTPLVNPLIYSLRNEEVKKTLQKKTRKIKTKEQRNIMQRGYKSYTAFIKDSMFPKASLNMNTERRKQTQESTDRRQPRLSPRLPAGSRRRFAYRFLRSLFMENWKVSLEFPLVSLAAGSELACCLLDFASPRGQPL
SIO_010081: LOC100550402
subclass of: SO_0000673
so part of: LOC100550402
location: join(41682..42606,51712..51849,58725..58912,59251..59259)
location: region:41682-59259:1
so has part: feature:41682-42606:1:exon
so has part: feature:51712-51849:1:exon
so has part: feature:58725-58912:1:exon
so has part: feature:59251-59259:1:exon

XP_031411046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41682-42606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:51712-51849:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:58725-58912:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:59251-59259:1:exon

TRNAI-AAU
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRNAI-AAU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 46233..46306
location: region:46233-46306:1
so has part: feature:46233-46306:1:exon
subclass of: SO_0000663

109369689
type: Gene
SIO_000068: ncbigene

position:46233:1
position: 46233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46306:1
position: 46306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:46233-46306:1:exon

TRNAI-AAU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
gene: TRNAI-AAU
product: tRNA-Ile
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA isoleucine (anticodon AAU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:46267..46269,aa:Ile,seq:aat)
SIO_010081: TRNAI-AAU
subclass of: SO_0000673
so part of: TRNAI-AAU
location: 46233..46306
location: region:46233-46306:1
so has part: feature:46233-46306:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:46233-46306:1:exon

SHF
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SHF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(62470..77361)
location: region:62470-77361:-1
so has part: feature:62470-77361:-1:exon
subclass of: SO_0000010

100551167
type: Gene
SIO_000068: ncbigene

position:62470:-1
position: 62470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77361:-1
position: 77361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:62470-77361:-1:exon

SHF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SHF
product: Src homology 2 domain containing F, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 70 samples with support for all annotated introns
transcript id: XM_031555236.1
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(62470..66575,69790..69961,72359..72496,73848..74066,74971..77361))
location: region:62470-77361:-1
so has part: feature:74971-77361:-1:exon
so has part: feature:73848-74066:-1:exon
so has part: feature:72359-72496:-1:exon
so has part: feature:69790-69961:-1:exon
so has part: feature:62470-66575:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74971-77361:-1:exon

position:74971:-1
position: 74971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:73848-74066:-1:exon

position:73848:-1
position: 73848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74066:-1
position: 74066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:72359-72496:-1:exon

position:72359:-1
position: 72359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72496:-1
position: 72496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:69790-69961:-1:exon

position:69790:-1
position: 69790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69961:-1
position: 69961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:62470-66575:-1:exon

position:66575:-1
position: 66575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SHF
product: Src homology 2 domain containing F, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 184 samples with support for all annotated introns
transcript id: XM_010717108.3
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(62470..66575,69422..69541,69790..69961,72359..72496,73848..74066,74971..76283))
location: region:62470-76283:-1
so has part: feature:74971-76283:-1:exon
so has part: feature:73848-74066:-1:exon
so has part: feature:72359-72496:-1:exon
so has part: feature:69790-69961:-1:exon
so has part: feature:69422-69541:-1:exon
so has part: feature:62470-66575:-1:exon

position:76283:-1
position: 76283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74971-76283:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73848-74066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72359-72496:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69790-69961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69422-69541:-1:exon

position:69422:-1
position: 69422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69541:-1
position: 69541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:62470-66575:-1:exon

SHF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SHF
product: Src homology 2 domain containing F, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 194 samples with support for all annotated introns
transcript id: XM_010717109.3
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(62470..66575,69422..69541,69790..69961,73848..74066,74971..76280))
location: region:62470-76280:-1
so has part: feature:74971-76280:-1:exon
so has part: feature:73848-74066:-1:exon
so has part: feature:69790-69961:-1:exon
so has part: feature:69422-69541:-1:exon
so has part: feature:62470-66575:-1:exon

position:76280:-1
position: 76280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74971-76280:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73848-74066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69790-69961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69422-69541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:62470-66575:-1:exon

SHF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SHF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein F isoform X3
translation: MEPYEAQKMMAEIRQKGLREAPTRPLHLYDTPYEPISGGLDVDTDRPACPRPRESRLPEDDERPPEEYDQPWEWKKERISKAFAGPSEGLGYGRTSPCREEKARAALRHGTSSLKGTKALSTEPGPFIGERIDPALPLESQCWYHGAISRTDAETLLRLCKEASYLVRNSETSKNDFSLSLKSSQGFMHMKLSRTQENKYVLGQHSPPFDSVPEIIHHYASRKLPIKGAEHMSLLYPVAIRTL
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(66389..66575,69422..69541,69790..69961,73848..74066,74971..75004))
location: region:66389-75004:-1
so has part: feature:74971-75004:-1:exon
so has part: feature:73848-74066:-1:exon
so has part: feature:69790-69961:-1:exon
so has part: feature:69422-69541:-1:exon
so has part: feature:66389-66575:-1:exon

XP_010715411.1
type: Protein
SIO_000068: ncbiprotein

position:66389:-1
position: 66389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75004:-1
position: 75004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74971-75004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73848-74066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:69790-69961:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69422-69541:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66389-66575:-1:exon

SHF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SHF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein F isoform X2
translation: MEPYEAQKMMAEIRQKGLREAPTRPLHLYDTPYEPISGGLDVDTDRPACPRPRESRLPEDDERPPEEYDQPWEWKKERISKAFAVEIKVIKDLPWPPPVGQLDSGETPPDSEASASVPPQHGLQSYEDANGPSEGLGYGRTSPCREEKARAALRHGTSSLKGTKALSTEPGPFIGERIDPALPLESQWSSQGFMHMKLSRTQENKYVLGQHSPPFDSVPEIIHHYASRKLPIKGAEHMSLLYPVAIRTL
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(66389..66575,69790..69961,72359..72496,73848..74066,74971..75004))
location: region:66389-75004:-1
so has part: feature:74971-75004:-1:exon
so has part: feature:73848-74066:-1:exon
so has part: feature:72359-72496:-1:exon
so has part: feature:69790-69961:-1:exon
so has part: feature:66389-66575:-1:exon

XP_031411096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74971-75004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73848-74066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72359-72496:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69790-69961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:66389-66575:-1:exon

SHF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SHF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing adapter protein F isoform X1
translation: MEPYEAQKMMAEIRQKGLREAPTRPLHLYDTPYEPISGGLDVDTDRPACPRPRESRLPEDDERPPEEYDQPWEWKKERISKAFAVEIKVIKDLPWPPPVGQLDSGETPPDSEASASVPPQHGLQSYEDANGPSEGLGYGRTSPCREEKARAALRHGTSSLKGTKALSTEPGPFIGERIDPALPLESQCWYHGAISRTDAETLLRLCKEASYLVRNSETSKNDFSLSLKSSQGFMHMKLSRTQENKYVLGQHSPPFDSVPEIIHHYASRKLPIKGAEHMSLLYPVAIRTL
SIO_010081: SHF
subclass of: SO_0000673
so part of: SHF
location: complement(join(66389..66575,69422..69541,69790..69961,72359..72496,73848..74066,74971..75004))
location: region:66389-75004:-1
so has part: feature:74971-75004:-1:exon
so has part: feature:73848-74066:-1:exon
so has part: feature:72359-72496:-1:exon
so has part: feature:69790-69961:-1:exon
so has part: feature:69422-69541:-1:exon
so has part: feature:66389-66575:-1:exon

XP_010715410.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:74971-75004:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:73848-74066:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:72359-72496:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:69790-69961:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:69422-69541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:66389-66575:-1:exon

TRNAH-GUG
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRNAH-GUG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 86605..86676
location: region:86605-86676:1
so has part: feature:86605-86676:1:exon
subclass of: SO_0000663

109369690
type: Gene
SIO_000068: ncbigene

position:86605:1
position: 86605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:86676:1
position: 86676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:86605-86676:1:exon

TRNAH-GUG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
gene: TRNAH-GUG
product: tRNA-His
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA histidin (anticodon GUG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:86638..86640,aa:His,seq:gtg)
SIO_010081: TRNAH-GUG
subclass of: SO_0000673
so part of: TRNAH-GUG
location: 86605..86676
location: region:86605-86676:1
so has part: feature:86605-86676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:86605-86676:1:exon

LOC100550554
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100550554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 87042..95068
location: region:87042-95068:1
so has part: feature:87042-95068:1:exon
subclass of: SO_0000010

100550554
type: Gene
SIO_000068: ncbigene

position:87042:1
position: 87042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:95068:1
position: 95068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87042-95068:1:exon

LOC100550554
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100550554
product: sodium/nucleoside cotransporter 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_031555237.1
SIO_010081: LOC100550554
subclass of: SO_0000673
so part of: LOC100550554
location: join(87042..87413,88307..88434,88508..88602,88715..88806,89054..89243,89352..89493,90117..90230,90590..90667,90939..91019,91324..91404,91530..91655,92424..92554,92697..92865,92990..93187,93628..93709,94060..94158,94540..94651,94795..95068)
location: region:87042-95068:1
so has part: feature:87042-87413:1:exon
so has part: feature:88307-88434:1:exon
so has part: feature:88508-88602:1:exon
so has part: feature:88715-88806:1:exon
so has part: feature:89054-89243:1:exon
so has part: feature:89352-89493:1:exon
so has part: feature:90117-90230:1:exon
so has part: feature:90590-90667:1:exon
so has part: feature:90939-91019:1:exon
so has part: feature:91324-91404:1:exon
so has part: feature:91530-91655:1:exon
so has part: feature:92424-92554:1:exon
so has part: feature:92697-92865:1:exon
so has part: feature:92990-93187:1:exon
so has part: feature:93628-93709:1:exon
so has part: feature:94060-94158:1:exon
so has part: feature:94540-94651:1:exon
so has part: feature:94795-95068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87042-87413:1:exon

position:87413:1
position: 87413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88307-88434:1:exon

position:88307:1
position: 88307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88434:1
position: 88434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:88508-88602:1:exon

position:88508:1
position: 88508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88602:1
position: 88602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:88715-88806:1:exon

position:88715:1
position: 88715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:88806:1
position: 88806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:89054-89243:1:exon

position:89054:1
position: 89054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89243:1
position: 89243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:89352-89493:1:exon

position:89352:1
position: 89352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:89493:1
position: 89493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:90117-90230:1:exon

position:90117:1
position: 90117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90230:1
position: 90230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:90590-90667:1:exon

position:90590:1
position: 90590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:90667:1
position: 90667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:90939-91019:1:exon

position:90939:1
position: 90939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91019:1
position: 91019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:91324-91404:1:exon

position:91324:1
position: 91324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91404:1
position: 91404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:91530-91655:1:exon

position:91530:1
position: 91530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:91655:1
position: 91655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:92424-92554:1:exon

position:92424:1
position: 92424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92554:1
position: 92554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:92697-92865:1:exon

position:92697:1
position: 92697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:92865:1
position: 92865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:92990-93187:1:exon

position:92990:1
position: 92990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93187:1
position: 93187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:93628-93709:1:exon

position:93628:1
position: 93628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:93709:1
position: 93709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:94060-94158:1:exon

position:94060:1
position: 94060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94158:1
position: 94158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:94540-94651:1:exon

position:94540:1
position: 94540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94651:1
position: 94651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:94795-95068:1:exon

position:94795:1
position: 94795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100550554
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100550554
product: sodium/nucleoside cotransporter 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 77 samples with support for all annotated introns
transcript id: XM_019619337.2
SIO_010081: LOC100550554
subclass of: SO_0000673
so part of: LOC100550554
location: join(87291..87413,88307..88434,88508..88602,88715..88806,89054..89243,89352..89493,90117..90230,90590..90667,90939..91019,91324..91404,91530..91655,92424..92554,92697..92865,92990..93187,93628..93709,94060..94158,94795..95068)
location: region:87291-95068:1
so has part: feature:87291-87413:1:exon
so has part: feature:88307-88434:1:exon
so has part: feature:88508-88602:1:exon
so has part: feature:88715-88806:1:exon
so has part: feature:89054-89243:1:exon
so has part: feature:89352-89493:1:exon
so has part: feature:90117-90230:1:exon
so has part: feature:90590-90667:1:exon
so has part: feature:90939-91019:1:exon
so has part: feature:91324-91404:1:exon
so has part: feature:91530-91655:1:exon
so has part: feature:92424-92554:1:exon
so has part: feature:92697-92865:1:exon
so has part: feature:92990-93187:1:exon
so has part: feature:93628-93709:1:exon
so has part: feature:94060-94158:1:exon
so has part: feature:94795-95068:1:exon

position:87291:1
position: 87291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:87291-87413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88307-88434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88508-88602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88715-88806:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89054-89243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89352-89493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90117-90230:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90590-90667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90939-91019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91324-91404:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:91530-91655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92424-92554:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92697-92865:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:92990-93187:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:93628-93709:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94060-94158:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94795-95068:1:exon

LOC100550554
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100550554
product: sodium/nucleoside cotransporter 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_019619338.2
SIO_010081: LOC100550554
subclass of: SO_0000673
so part of: LOC100550554
location: join(87291..87413,88307..88434,88508..88602,88715..88806,89054..89243,89352..89493,90117..90230,90590..90667,90939..91019,91324..91404,91530..91655,92424..92554,92697..92865,93628..93709,94060..94158,94540..94651,94795..95068)
location: region:87291-95068:1
so has part: feature:87291-87413:1:exon
so has part: feature:88307-88434:1:exon
so has part: feature:88508-88602:1:exon
so has part: feature:88715-88806:1:exon
so has part: feature:89054-89243:1:exon
so has part: feature:89352-89493:1:exon
so has part: feature:90117-90230:1:exon
so has part: feature:90590-90667:1:exon
so has part: feature:90939-91019:1:exon
so has part: feature:91324-91404:1:exon
so has part: feature:91530-91655:1:exon
so has part: feature:92424-92554:1:exon
so has part: feature:92697-92865:1:exon
so has part: feature:93628-93709:1:exon
so has part: feature:94060-94158:1:exon
so has part: feature:94540-94651:1:exon
so has part: feature:94795-95068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:87291-87413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88307-88434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88508-88602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:88715-88806:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89054-89243:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:89352-89493:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90117-90230:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90590-90667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:90939-91019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91324-91404:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:91530-91655:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92424-92554:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92697-92865:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93628-93709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94060-94158:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94540-94651:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94795-95068:1:exon

LOC100550554
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100550554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/nucleoside cotransporter 1 isoform X1
translation: MARLEMEGNQITLDNLEKGIDNPAFSSLGEEELCEERDGPHGGNEKKGGEGNGRVASYCRKALQPASKAKSFCKAHAKALRRVFWGLIGAAYLCYFIAACWLNFQRALALVIITAVVIFFVCWSLFKKYCGAKVLMLLSPLWKYLQKSWPWLKWLLYVLLLGGLVTWLALDTAKNPEQLISLAGFCVLVLFLFAFSKHHSAVSWRAVFWGLGLEFLIGLFILRTTPGIQAFQWLGDQIQVFLGYTKAGSGFVFGNTLIEDVFAFQSLPIIVFFSCVMSILYYLGVMQWLILKISWLLQVSLGTTPTETLSVAGNIFVGQTEAPLLIRPYLADMTHSEIHAVMAGGFSTIAGSVMGAYISFGIDAASLIAASVMAAPCALAMSKLVYPEVEESKFKGKESVCISSGEERNILEAASNGAAASIGLVANIAANLIAFLAVLEFINAALCWFGEMVEIKDFSFQMICSYVLMPVAFLMGADWADSPLVAELLGMKIFLNEFVAYQQLATYKKNRLSGLEEWSGGRKQWISERAESITTFALCGFANLSSIGIMLGGLTSMVPHRKSELASIVLRALLTGICVSMLNSCLAGLLYVPTEMGNCVTILSTANFTSTNYAIYTCCKQLFASTVLENGTLSFTGIWASVAESLPCLTQCCGHYNHTSCMV
SIO_010081: LOC100550554
subclass of: SO_0000673
so part of: LOC100550554
location: join(88351..88434,88508..88602,88715..88806,89054..89243,89352..89493,90117..90230,90590..90667,90939..91019,91324..91404,91530..91655,92424..92554,92697..92865,92990..93187,93628..93709,94060..94158,94540..94651,94795..94912)
location: region:88351-94912:1
so has part: feature:88351-88434:1:exon
so has part: feature:88508-88602:1:exon
so has part: feature:88715-88806:1:exon
so has part: feature:89054-89243:1:exon
so has part: feature:89352-89493:1:exon
so has part: feature:90117-90230:1:exon
so has part: feature:90590-90667:1:exon
so has part: feature:90939-91019:1:exon
so has part: feature:91324-91404:1:exon
so has part: feature:91530-91655:1:exon
so has part: feature:92424-92554:1:exon
so has part: feature:92697-92865:1:exon
so has part: feature:92990-93187:1:exon
so has part: feature:93628-93709:1:exon
so has part: feature:94060-94158:1:exon
so has part: feature:94540-94651:1:exon
so has part: feature:94795-94912:1:exon

XP_031411097.1
type: Protein
SIO_000068: ncbiprotein

position:88351:1
position: 88351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:94912:1
position: 94912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88351-88434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88508-88602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88715-88806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89054-89243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89352-89493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90117-90230:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90590-90667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90939-91019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91324-91404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91530-91655:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92424-92554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92697-92865:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92990-93187:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93628-93709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94060-94158:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94540-94651:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:94795-94912:1:exon

LOC100550554
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100550554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/nucleoside cotransporter 1 isoform X3
translation: MARLEMEGNQITLDNLEKGIDNPAFSSLGEEELCEERDGPHGGNEKKGGEGNGRVASYCRKALQPASKAKSFCKAHAKALRRVFWGLIGAAYLCYFIAACWLNFQRALALVIITAVVIFFVCWSLFKKYCGAKVLMLLSPLWKYLQKSWPWLKWLLYVLLLGGLVTWLALDTAKNPEQLISLAGFCVLVLFLFAFSKHHSAVSWRAVFWGLGLEFLIGLFILRTTPGIQAFQWLGDQIQVFLGYTKAGSGFVFGNTLIEDVFAFQSLPIIVFFSCVMSILYYLGVMQWLILKISWLLQVSLGTTPTETLSVAGNIFVGQTEAPLLIRPYLADMTHSEIHAVMAGGFSTIAGSVMGAYISFGIDAASLIAASVMAAPCALAMSKLVYPEVEESKFKGKESVCISSGEERNILEAASNGAAASIGLVANIAANLIAFLAVLEFINAALCWFGEMVEIKDFSFQERAESITTFALCGFANLSSIGIMLGGLTSMVPHRKSELASIVLRALLTGICVSMLNSCLAGLLYVPTEMGNCVTILSTANFTSTNYAIYTCCKQLFASTVLENGTLSFTGIWASVAESLPCLTQCCGHYNHTSCMV
SIO_010081: LOC100550554
subclass of: SO_0000673
so part of: LOC100550554
location: join(88351..88434,88508..88602,88715..88806,89054..89243,89352..89493,90117..90230,90590..90667,90939..91019,91324..91404,91530..91655,92424..92554,92697..92865,93628..93709,94060..94158,94540..94651,94795..94912)
location: region:88351-94912:1
so has part: feature:88351-88434:1:exon
so has part: feature:88508-88602:1:exon
so has part: feature:88715-88806:1:exon
so has part: feature:89054-89243:1:exon
so has part: feature:89352-89493:1:exon
so has part: feature:90117-90230:1:exon
so has part: feature:90590-90667:1:exon
so has part: feature:90939-91019:1:exon
so has part: feature:91324-91404:1:exon
so has part: feature:91530-91655:1:exon
so has part: feature:92424-92554:1:exon
so has part: feature:92697-92865:1:exon
so has part: feature:93628-93709:1:exon
so has part: feature:94060-94158:1:exon
so has part: feature:94540-94651:1:exon
so has part: feature:94795-94912:1:exon

XP_019474883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:88351-88434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88508-88602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88715-88806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89054-89243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89352-89493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90117-90230:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90590-90667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90939-91019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91324-91404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91530-91655:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92424-92554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92697-92865:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:93628-93709:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:94060-94158:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94540-94651:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94795-94912:1:exon

LOC100550554
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100550554
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/nucleoside cotransporter 2 isoform X2
translation: MARLEMEGNQITLDNLEKGIDNPAFSSLGEEELCEERDGPHGGNEKKGGEGNGRVASYCRKALQPASKAKSFCKAHAKALRRVFWGLIGAAYLCYFIAACWLNFQRALALVIITAVVIFFVCWSLFKKYCGAKVLMLLSPLWKYLQKSWPWLKWLLYVLLLGGLVTWLALDTAKNPEQLISLAGFCVLVLFLFAFSKHHSAVSWRAVFWGLGLEFLIGLFILRTTPGIQAFQWLGDQIQVFLGYTKAGSGFVFGNTLIEDVFAFQSLPIIVFFSCVMSILYYLGVMQWLILKISWLLQVSLGTTPTETLSVAGNIFVGQTEAPLLIRPYLADMTHSEIHAVMAGGFSTIAGSVMGAYISFGIDAASLIAASVMAAPCALAMSKLVYPEVEESKFKGKESVCISSGEERNILEAASNGAAASIGLVANIAANLIAFLAVLEFINAALCWFGEMVEIKDFSFQMICSYVLMPVAFLMGADWADSPLVAELLGMKIFLNEFVAYQQLATYKKNRLSGLEEWSGGRKQWISERAESITTFALCGFANLSSIGIMLGGLTSMVPHRKSELASIVLRALLTGICVSMLNSCLAARCSRMGRSPLRESGPAWQRACHA
SIO_010081: LOC100550554
subclass of: SO_0000673
so part of: LOC100550554
location: join(88351..88434,88508..88602,88715..88806,89054..89243,89352..89493,90117..90230,90590..90667,90939..91019,91324..91404,91530..91655,92424..92554,92697..92865,92990..93187,93628..93709,94060..94158,94795..94868)
location: region:88351-94868:1
so has part: feature:88351-88434:1:exon
so has part: feature:88508-88602:1:exon
so has part: feature:88715-88806:1:exon
so has part: feature:89054-89243:1:exon
so has part: feature:89352-89493:1:exon
so has part: feature:90117-90230:1:exon
so has part: feature:90590-90667:1:exon
so has part: feature:90939-91019:1:exon
so has part: feature:91324-91404:1:exon
so has part: feature:91530-91655:1:exon
so has part: feature:92424-92554:1:exon
so has part: feature:92697-92865:1:exon
so has part: feature:92990-93187:1:exon
so has part: feature:93628-93709:1:exon
so has part: feature:94060-94158:1:exon
so has part: feature:94795-94868:1:exon

XP_019474882.1
type: Protein
SIO_000068: ncbiprotein

position:94868:1
position: 94868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88351-88434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:88508-88602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:88715-88806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:89054-89243:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:89352-89493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:90117-90230:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:90590-90667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:90939-91019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:91324-91404:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:91530-91655:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:92424-92554:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:92697-92865:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:92990-93187:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:93628-93709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:94060-94158:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:94795-94868:1:exon

ALPK3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ALPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(95350..116692)
location: region:95350-116692:-1
so has part: feature:95350-116692:-1:exon
subclass of: SO_0000010

100550707
type: Gene
SIO_000068: ncbigene

position:95350:-1
position: 95350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116692:-1
position: 116692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95350-116692:-1:exon

ALPK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ALPK3
product: alpha kinase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_019619336.2
SIO_010081: ALPK3
subclass of: SO_0000673
so part of: ALPK3
location: complement(join(95350..96825,96985..97033,97230..97447,97674..97762,98093..98367,98475..98510,98629..98756,99671..99818,100480..102316,105130..106150,107274..107391,113323..113444,116588..116692))
location: region:95350-116692:-1
so has part: feature:116588-116692:-1:exon
so has part: feature:113323-113444:-1:exon
so has part: feature:107274-107391:-1:exon
so has part: feature:105130-106150:-1:exon
so has part: feature:100480-102316:-1:exon
so has part: feature:99671-99818:-1:exon
so has part: feature:98629-98756:-1:exon
so has part: feature:98475-98510:-1:exon
so has part: feature:98093-98367:-1:exon
so has part: feature:97674-97762:-1:exon
so has part: feature:97230-97447:-1:exon
so has part: feature:96985-97033:-1:exon
so has part: feature:95350-96825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:116588-116692:-1:exon

position:116588:-1
position: 116588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113323-113444:-1:exon

position:113323:-1
position: 113323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113444:-1
position: 113444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:107274-107391:-1:exon

position:107274:-1
position: 107274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107391:-1
position: 107391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:105130-106150:-1:exon

position:105130:-1
position: 105130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106150:-1
position: 106150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:100480-102316:-1:exon

position:100480:-1
position: 100480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:102316:-1
position: 102316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:99671-99818:-1:exon

position:99671:-1
position: 99671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:99818:-1
position: 99818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:98629-98756:-1:exon

position:98629:-1
position: 98629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98756:-1
position: 98756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:98475-98510:-1:exon

position:98475:-1
position: 98475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98510:-1
position: 98510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:98093-98367:-1:exon

position:98093:-1
position: 98093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:98367:-1
position: 98367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:97674-97762:-1:exon

position:97674:-1
position: 97674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97762:-1
position: 97762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:97230-97447:-1:exon

position:97230:-1
position: 97230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97447:-1
position: 97447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:96985-97033:-1:exon

position:96985:-1
position: 96985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:97033:-1
position: 97033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:95350-96825:-1:exon

position:96825:-1
position: 96825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ALPK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ALPK3
product: alpha kinase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_003209294.4
SIO_010081: ALPK3
subclass of: SO_0000673
so part of: ALPK3
location: complement(join(95350..96825,96985..97033,97230..97447,97674..97762,98093..98367,98475..98510,98629..98756,99671..99818,100480..102316,105130..106150,107274..107391,113323..113444,114823..116536))
location: region:95350-116536:-1
so has part: feature:114823-116536:-1:exon
so has part: feature:113323-113444:-1:exon
so has part: feature:107274-107391:-1:exon
so has part: feature:105130-106150:-1:exon
so has part: feature:100480-102316:-1:exon
so has part: feature:99671-99818:-1:exon
so has part: feature:98629-98756:-1:exon
so has part: feature:98475-98510:-1:exon
so has part: feature:98093-98367:-1:exon
so has part: feature:97674-97762:-1:exon
so has part: feature:97230-97447:-1:exon
so has part: feature:96985-97033:-1:exon
so has part: feature:95350-96825:-1:exon

position:116536:-1
position: 116536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114823-116536:-1:exon

position:114823:-1
position: 114823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:113323-113444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107274-107391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105130-106150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100480-102316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99671-99818:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98629-98756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98475-98510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98093-98367:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97674-97762:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97230-97447:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96985-97033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:95350-96825:-1:exon

ALPK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ALPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-protein kinase 3 isoform X1
translation: MPSAWELVKLMLLPSPLSLRDPSPCISHKLRMMGSRSENCSIAAPRSTFCAIISQLTEETQPLFETTIKSRSVSEDSDAKFTCIVTGYPQPEVTWYKDNEEMDRYCGLPKYQIFHHGNHHTLQLYKCREEDAGIYQASARNIKGIVSCSGVLEVGTMTEFKIHQKWFAKIKRKAEEKLREIEQSKKRGKENVEVESLQRMSPDRLQRKRRLARDLNLRPGASLWEKEDAAKVHITDSKSRLLEDVADSKEQSVNTIAGLPSKLITPLKAEVTTNGDTSLESVEENGNGFLAYIYETVEDLVSKPLAKDSAAKKKKKVVDAPAAKQEVLKREENGGDRVKPSTNPRFAPPVPLRRSAHLRLASDQEEENIPKTKEPVKAVNQDTKVNGDMHFSLKELYFDNQVKETARKGEVGTKEEAVSEAAPRPVAGRQAEDASSSSNAAPAPSEGQKDQRTAKKSEGHKVIGAEVVTTAGPSANDIKHPVSGPAIDSSQQAGKLEALRKEKPVSQETRGTGKRTNPRLRFQETPKPPAPSADHAQTSGEQPASRAQAEGHSHSLEGRETQQGLSNQEVKSQGTKEPLSKKLSPPEPGEDTLHEKSTHQTAVKHEKSKEKGVEPSGSKPCKEAGGSSVAVLSPEMVETPSGLQETETPALPSVCVTEEKLIPTAAVGTLVVQEAPPAACSSQRTETSAEAAPSGIQLLPPVSKDTETKKADGAALQEMFPTSTSGEADAKPVSVVPQREEGGMQMATTPSQQLAAPLGIFERGAEVQPQAPLVLPSPERPQEMTLEEKMQHKTLVSSLKNYLLLLLHLSDSSKDATKEDAEPRSEEQSATEEAPLPAIGIAGLSPRTSRRVLEKVQNNQIFQTAENLPLTPRTSRRITGMINEEFITSREMLACRPVPPKRRTKMAPEAEGPIQLSVPSIVVGNVPAAAVGQPSHNVPNLPPVISEKESPADPLAVLPCATPEELASGARRKIYLPKTKQVGEEEEVSPESQGHARSPTVSPRQSRKSAALLQTPALAPSPPTERRSPTLTKKMATLEVPKLYEEPTGDTSRDHEVPEDAKPEEQPAESKKASNPLKAPQVIRKIRAEQFSDASGNLKLWCQFFNILSDSKLMWYKDEIPVAEAQRSAGDEGQAALAIVQASQKDCGVYRCVISNEYGMDSTDFLLSLEVLSGFILREEIEVGEEIEMTPMVFAKGLADAGYWGDKFFGRVMSEDMELGAGFLRKACRARAIYGLEPVFESGCTCIIKVHNFIVFGTKNENSLIEKNYDITIQECKIQNSSREYCKIFAAEARAVPGFGAVPEIVPLYLIYRPANNIPYATMEEDLGGPCEQYCVTERDGSLVARGTSEIVLKCCTFQHWVYQWTNGNILVTDMEGVGWKMTNVRIATNLKGYQGLKESCFPSLLEQFAATHQCNHYCDILGLKTLEPVKPKGSKSPSMGRKSAQSSPQLQKKGTASPQGTRKTTVSPRSARRMAEAAEAQAASKTGPGEAGGPTCPQ
SIO_010081: ALPK3
subclass of: SO_0000673
so part of: ALPK3
location: complement(join(96504..96825,96985..97033,97230..97447,97674..97762,98093..98367,98475..98510,98629..98756,99671..99818,100480..102316,105130..106150,107274..107391,113323..113444,114823..114959))
location: region:96504-114959:-1
so has part: feature:114823-114959:-1:exon
so has part: feature:113323-113444:-1:exon
so has part: feature:107274-107391:-1:exon
so has part: feature:105130-106150:-1:exon
so has part: feature:100480-102316:-1:exon
so has part: feature:99671-99818:-1:exon
so has part: feature:98629-98756:-1:exon
so has part: feature:98475-98510:-1:exon
so has part: feature:98093-98367:-1:exon
so has part: feature:97674-97762:-1:exon
so has part: feature:97230-97447:-1:exon
so has part: feature:96985-97033:-1:exon
so has part: feature:96504-96825:-1:exon

XP_003209342.2
type: Protein
SIO_000068: ncbiprotein

position:96504:-1
position: 96504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:114959:-1
position: 114959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:114823-114959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:113323-113444:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:107274-107391:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:105130-106150:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:100480-102316:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:99671-99818:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98629-98756:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:98475-98510:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:98093-98367:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:97674-97762:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:97230-97447:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:96985-97033:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:96504-96825:-1:exon

ALPK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ALPK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: alpha-protein kinase 3 isoform X2
translation: MDRYCGLPKYQIFHHGNHHTLQLYKCREEDAGIYQASARNIKGIVSCSGVLEVGTMTEFKIHQKWFAKIKRKAEEKLREIEQSKKRGKENVEVESLQRMSPDRLQRKRRLARDLNLRPGASLWEKEDAAKVHITDSKSRLLEDVADSKEQSVNTIAGLPSKLITPLKAEVTTNGDTSLESVEENGNGFLAYIYETVEDLVSKPLAKDSAAKKKKKVVDAPAAKQEVLKREENGGDRVKPSTNPRFAPPVPLRRSAHLRLASDQEEENIPKTKEPVKAVNQDTKVNGDMHFSLKELYFDNQVKETARKGEVGTKEEAVSEAAPRPVAGRQAEDASSSSNAAPAPSEGQKDQRTAKKSEGHKVIGAEVVTTAGPSANDIKHPVSGPAIDSSQQAGKLEALRKEKPVSQETRGTGKRTNPRLRFQETPKPPAPSADHAQTSGEQPASRAQAEGHSHSLEGRETQQGLSNQEVKSQGTKEPLSKKLSPPEPGEDTLHEKSTHQTAVKHEKSKEKGVEPSGSKPCKEAGGSSVAVLSPEMVETPSGLQETETPALPSVCVTEEKLIPTAAVGTLVVQEAPPAACSSQRTETSAEAAPSGIQLLPPVSKDTETKKADGAALQEMFPTSTSGEADAKPVSVVPQREEGGMQMATTPSQQLAAPLGIFERGAEVQPQAPLVLPSPERPQEMTLEEKMQHKTLVSSLKNYLLLLLHLSDSSKDATKEDAEPRSEEQSATEEAPLPAIGIAGLSPRTSRRVLEKVQNNQIFQTAENLPLTPRTSRRITGMINEEFITSREMLACRPVPPKRRTKMAPEAEGPIQLSVPSIVVGNVPAAAVGQPSHNVPNLPPVISEKESPADPLAVLPCATPEELASGARRKIYLPKTKQVGEEEEVSPESQGHARSPTVSPRQSRKSAALLQTPALAPSPPTERRSPTLTKKMATLEVPKLYEEPTGDTSRDHEVPEDAKPEEQPAESKKASNPLKAPQVIRKIRAEQFSDASGNLKLWCQFFNILSDSKLMWYKDEIPVAEAQRSAGDEGQAALAIVQASQKDCGVYRCVISNEYGMDSTDFLLSLEVLSGFILREEIEVGEEIEMTPMVFAKGLADAGYWGDKFFGRVMSEDMELGAGFLRKACRARAIYGLEPVFESGCTCIIKVHNFIVFGTKNENSLIEKNYDITIQECKIQNSSREYCKIFAAEARAVPGFGAVPEIVPLYLIYRPANNIPYATMEEDLGGPCEQYCVTERDGSLVARGTSEIVLKCCTFQHWVYQWTNGNILVTDMEGVGWKMTNVRIATNLKGYQGLKESCFPSLLEQFAATHQCNHYCDILGLKTLEPVKPKGSKSPSMGRKSAQSSPQLQKKGTASPQGTRKTTVSPRSARRMAEAAEAQAASKTGPGEAGGPTCPQ
SIO_010081: ALPK3
subclass of: SO_0000673
so part of: ALPK3
location: complement(join(96504..96825,96985..97033,97230..97447,97674..97762,98093..98367,98475..98510,98629..98756,99671..99818,100480..102316,105130..106150,107274..107347))
location: region:96504-107347:-1
so has part: feature:107274-107347:-1:exon
so has part: feature:105130-106150:-1:exon
so has part: feature:100480-102316:-1:exon
so has part: feature:99671-99818:-1:exon
so has part: feature:98629-98756:-1:exon
so has part: feature:98475-98510:-1:exon
so has part: feature:98093-98367:-1:exon
so has part: feature:97674-97762:-1:exon
so has part: feature:97230-97447:-1:exon
so has part: feature:96985-97033:-1:exon
so has part: feature:96504-96825:-1:exon

XP_019474881.1
type: Protein
SIO_000068: ncbiprotein

position:107347:-1
position: 107347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:107274-107347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:105130-106150:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:100480-102316:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:99671-99818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:98629-98756:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:98475-98510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:98093-98367:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:97674-97762:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:97230-97447:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96985-97033:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:96504-96825:-1:exon

LOC104912747
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 131696..156957
location: region:131696-156957:1
so has part: feature:131696-156957:1:exon
subclass of: SO_0000010

104912747
type: Gene
SIO_000068: ncbigene

position:131696:1
position: 131696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156957:1
position: 156957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131696-156957:1:exon

LOC104912747
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912747
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 142 samples with support for all annotated introns
transcript id: XM_010717115.3
SIO_010081: LOC104912747
subclass of: SO_0000673
so part of: LOC104912747
location: join(131696..131729,132461..132579,132886..133039,133731..133951,135190..135286,138423..138449,139249..139452,144186..144363,147719..147793,148406..148533,148802..148933,149075..149226,153527..153652,155054..156957)
location: region:131696-156957:1
so has part: feature:131696-131729:1:exon
so has part: feature:132461-132579:1:exon
so has part: feature:132886-133039:1:exon
so has part: feature:133731-133951:1:exon
so has part: feature:135190-135286:1:exon
so has part: feature:138423-138449:1:exon
so has part: feature:139249-139452:1:exon
so has part: feature:144186-144363:1:exon
so has part: feature:147719-147793:1:exon
so has part: feature:148406-148533:1:exon
so has part: feature:148802-148933:1:exon
so has part: feature:149075-149226:1:exon
so has part: feature:153527-153652:1:exon
so has part: feature:155054-156957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131696-131729:1:exon

position:131729:1
position: 131729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:132461-132579:1:exon

position:132461:1
position: 132461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:132579:1
position: 132579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:132886-133039:1:exon

position:132886:1
position: 132886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133039:1
position: 133039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:133731-133951:1:exon

position:133731:1
position: 133731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133951:1
position: 133951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135190-135286:1:exon

position:135190:1
position: 135190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135286:1
position: 135286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:138423-138449:1:exon

position:138423:1
position: 138423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138449:1
position: 138449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:139249-139452:1:exon

position:139249:1
position: 139249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:139452:1
position: 139452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:144186-144363:1:exon

position:144186:1
position: 144186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144363:1
position: 144363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:147719-147793:1:exon

position:147719:1
position: 147719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147793:1
position: 147793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:148406-148533:1:exon

position:148406:1
position: 148406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148533:1
position: 148533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:148802-148933:1:exon

position:148802:1
position: 148802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148933:1
position: 148933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:149075-149226:1:exon

position:149075:1
position: 149075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149226:1
position: 149226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:153527-153652:1:exon

position:153527:1
position: 153527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:153652:1
position: 153652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:155054-156957:1:exon

position:155054:1
position: 155054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912747
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912747
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 150 samples with support for all annotated introns
transcript id: XM_010717116.3
SIO_010081: LOC104912747
subclass of: SO_0000673
so part of: LOC104912747
location: join(131696..131729,132461..132579,132886..133039,133731..133909,135190..135286,138423..138449,139249..139452,144186..144363,147719..147793,148406..148533,148802..148933,149075..149226,153527..153652,155054..156957)
location: region:131696-156957:1
so has part: feature:131696-131729:1:exon
so has part: feature:132461-132579:1:exon
so has part: feature:132886-133039:1:exon
so has part: feature:133731-133909:1:exon
so has part: feature:135190-135286:1:exon
so has part: feature:138423-138449:1:exon
so has part: feature:139249-139452:1:exon
so has part: feature:144186-144363:1:exon
so has part: feature:147719-147793:1:exon
so has part: feature:148406-148533:1:exon
so has part: feature:148802-148933:1:exon
so has part: feature:149075-149226:1:exon
so has part: feature:153527-153652:1:exon
so has part: feature:155054-156957:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131696-131729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132461-132579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132886-133039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133731-133909:1:exon

position:133909:1
position: 133909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:135190-135286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138423-138449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139249-139452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:144186-144363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147719-147793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148406-148533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148802-148933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:149075-149226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153527-153652:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155054-156957:1:exon

LOC104912747
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912747
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_010717117.2
SIO_010081: LOC104912747
subclass of: SO_0000673
so part of: LOC104912747
location: join(131696..131729,132461..132579,132886..133039,133731..133951,135190..135286,138423..138449,139249..139452,144186..144363,147719..147793,148406..148533,148802..148933,149075..149226,153527..153652,154188..154302,155054..155138)
location: region:131696-155138:1
so has part: feature:131696-131729:1:exon
so has part: feature:132461-132579:1:exon
so has part: feature:132886-133039:1:exon
so has part: feature:133731-133951:1:exon
so has part: feature:135190-135286:1:exon
so has part: feature:138423-138449:1:exon
so has part: feature:139249-139452:1:exon
so has part: feature:144186-144363:1:exon
so has part: feature:147719-147793:1:exon
so has part: feature:148406-148533:1:exon
so has part: feature:148802-148933:1:exon
so has part: feature:149075-149226:1:exon
so has part: feature:153527-153652:1:exon
so has part: feature:154188-154302:1:exon
so has part: feature:155054-155138:1:exon

position:155138:1
position: 155138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131696-131729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132461-132579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132886-133039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133731-133951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135190-135286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138423-138449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139249-139452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:144186-144363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147719-147793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148406-148533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148802-148933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:149075-149226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153527-153652:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:154188-154302:1:exon

position:154188:1
position: 154188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154302:1
position: 154302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:155054-155138:1:exon

LOC104912747
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912747
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031555238.1
SIO_010081: LOC104912747
subclass of: SO_0000673
so part of: LOC104912747
location: join(131696..131729,132461..132579,132886..133039,133731..133951,135190..135286,138423..138449,139249..139452,144186..144363,147719..147793,148406..148533,148802..148933,149075..149226,153527..153652,154173..154202)
location: region:131696-154202:1
so has part: feature:131696-131729:1:exon
so has part: feature:132461-132579:1:exon
so has part: feature:132886-133039:1:exon
so has part: feature:133731-133951:1:exon
so has part: feature:135190-135286:1:exon
so has part: feature:138423-138449:1:exon
so has part: feature:139249-139452:1:exon
so has part: feature:144186-144363:1:exon
so has part: feature:147719-147793:1:exon
so has part: feature:148406-148533:1:exon
so has part: feature:148802-148933:1:exon
so has part: feature:149075-149226:1:exon
so has part: feature:153527-153652:1:exon
so has part: feature:154173-154202:1:exon

position:154202:1
position: 154202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131696-131729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132461-132579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132886-133039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133731-133951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135190-135286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138423-138449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139249-139452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:144186-144363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147719-147793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148406-148533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148802-148933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:149075-149226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153527-153652:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:154173-154202:1:exon

position:154173:1
position: 154173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912747
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X1
translation: MQTAIVITEQPVSVSVPVGYSFTLHCRAEAHTSLQYQWFCQCQSVRYQIPGATKQDLPITAQQTQLYTCRINDLYRNVIFSDWVKVEVHPYVAGGLLPQLWQGEPVIILNPTDQKVEVGKPLQLQCAAVGVPAPSYQWYRNGNVLEHQKKKKLWVTLPRDGSETLATEITQTKVSDSGTYLCCASNSRGEHWTNAVDIRIGTCRSEKLFATGKLALLVGNNHYQHHPNLMAPVTDVFELSLLLKQLGFQVVSLLDLNKAEMVAAVSRFLQLLEKGVYAIFYYAGHGYEHLGRNYMVPVDAPQLYAPENCISVQRILQKMQQQQTALNLILLDTCRKWYNPECALSQVQPLEPWGNTVYGYATSEDAEAYELQDGEFSSGIFMKYLKKHILQEKKVTHMLEDVLEDLGRDPMVTGKQVMEIKHTLKEARSLTDPICPMGAAAERWGCSHEPPSETVTFPCGVQAELRFHRLFSNVLSVCAKLQDLPVHVTDAQLMLRQPTEVDDVANLEESHPDQMDSLLTSVYKQEELDCVFQLCGLQKIQMDVVLQLDLHYTQLSTKQRTCESLQKILPKLLLGQFFTRRNYTRPSYDSTPARTDPSGALRTGTSRSLPSSNPSKSSSEPEENDERSMSELCSALLRAGPGQEHP
SIO_010081: LOC104912747
subclass of: SO_0000673
so part of: LOC104912747
location: join(131720..131729,132461..132579,132886..133039,133731..133951,135190..135286,138423..138449,139249..139452,144186..144363,147719..147793,148406..148533,148802..148933,149075..149226,153527..153652,155054..155371)
location: region:131720-155371:1
so has part: feature:131720-131729:1:exon
so has part: feature:132461-132579:1:exon
so has part: feature:132886-133039:1:exon
so has part: feature:133731-133951:1:exon
so has part: feature:135190-135286:1:exon
so has part: feature:138423-138449:1:exon
so has part: feature:139249-139452:1:exon
so has part: feature:144186-144363:1:exon
so has part: feature:147719-147793:1:exon
so has part: feature:148406-148533:1:exon
so has part: feature:148802-148933:1:exon
so has part: feature:149075-149226:1:exon
so has part: feature:153527-153652:1:exon
so has part: feature:155054-155371:1:exon

XP_010715417.1
type: Protein
SIO_000068: ncbiprotein

position:131720:1
position: 131720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155371:1
position: 155371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131720-131729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132461-132579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132886-133039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133731-133951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135190-135286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138423-138449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139249-139452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:144186-144363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147719-147793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148406-148533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148802-148933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:149075-149226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153527-153652:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155054-155371:1:exon

LOC104912747
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X2
translation: MQTAIVITEQPVSVSVPVGYSFTLHCRAEAHTSLQYQWFCQCQSVRYQIPGATKQDLPITAQQTQLYTCRINDLYRNVIFSDWVKVEVHPYVAGGLLPQLWQGEPVIILNPTDQKVEVGKPLQLQCAAVGVPAPSYQWYRNGNVLEHQKKKKLWITQTKVSDSGTYLCCASNSRGEHWTNAVDIRIGTCRSEKLFATGKLALLVGNNHYQHHPNLMAPVTDVFELSLLLKQLGFQVVSLLDLNKAEMVAAVSRFLQLLEKGVYAIFYYAGHGYEHLGRNYMVPVDAPQLYAPENCISVQRILQKMQQQQTALNLILLDTCRKWYNPECALSQVQPLEPWGNTVYGYATSEDAEAYELQDGEFSSGIFMKYLKKHILQEKKVTHMLEDVLEDLGRDPMVTGKQVMEIKHTLKEARSLTDPICPMGAAAERWGCSHEPPSETVTFPCGVQAELRFHRLFSNVLSVCAKLQDLPVHVTDAQLMLRQPTEVDDVANLEESHPDQMDSLLTSVYKQEELDCVFQLCGLQKIQMDVVLQLDLHYTQLSTKQRTCESLQKILPKLLLGQFFTRRNYTRPSYDSTPARTDPSGALRTGTSRSLPSSNPSKSSSEPEENDERSMSELCSALLRAGPGQEHP
SIO_010081: LOC104912747
subclass of: SO_0000673
so part of: LOC104912747
location: join(131720..131729,132461..132579,132886..133039,133731..133909,135190..135286,138423..138449,139249..139452,144186..144363,147719..147793,148406..148533,148802..148933,149075..149226,153527..153652,155054..155371)
location: region:131720-155371:1
so has part: feature:131720-131729:1:exon
so has part: feature:132461-132579:1:exon
so has part: feature:132886-133039:1:exon
so has part: feature:133731-133909:1:exon
so has part: feature:135190-135286:1:exon
so has part: feature:138423-138449:1:exon
so has part: feature:139249-139452:1:exon
so has part: feature:144186-144363:1:exon
so has part: feature:147719-147793:1:exon
so has part: feature:148406-148533:1:exon
so has part: feature:148802-148933:1:exon
so has part: feature:149075-149226:1:exon
so has part: feature:153527-153652:1:exon
so has part: feature:155054-155371:1:exon

XP_010715418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:131720-131729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132461-132579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132886-133039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133731-133909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135190-135286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138423-138449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139249-139452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:144186-144363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147719-147793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148406-148533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148802-148933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:149075-149226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153527-153652:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:155054-155371:1:exon

LOC104912747
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X3
translation: MQTAIVITEQPVSVSVPVGYSFTLHCRAEAHTSLQYQWFCQCQSVRYQIPGATKQDLPITAQQTQLYTCRINDLYRNVIFSDWVKVEVHPYVAGGLLPQLWQGEPVIILNPTDQKVEVGKPLQLQCAAVGVPAPSYQWYRNGNVLEHQKKKKLWVTLPRDGSETLATEITQTKVSDSGTYLCCASNSRGEHWTNAVDIRIGTCRSEKLFATGKLALLVGNNHYQHHPNLMAPVTDVFELSLLLKQLGFQVVSLLDLNKAEMVAAVSRFLQLLEKGVYAIFYYAGHGYEHLGRNYMVPVDAPQLYAPENCISVQRILQKMQQQQTALNLILLDTCRKWYNPECALSQVQPLEPWGNTVYGYATSEDAEAYELQDGEFSSGIFMKYLKKHILQEKKVTHMLEDVLEDLGRDPMVTGKQVMEIKHTLKEARSLTDPICPMGAAAERWGCSHEPPSETVTFPCGVQAELRFHRLFSNVLSVCAKLQDLPVHVTDAQLMLRQPTEVDDVANLEESHPDQMDSLLTSVYKQEELDCVFQLCGLQKIQHPASGSCQMLICRAPHRLTLNIALELLCGSAYSEQH
SIO_010081: LOC104912747
subclass of: SO_0000673
so part of: LOC104912747
location: join(131720..131729,132461..132579,132886..133039,133731..133951,135190..135286,138423..138449,139249..139452,144186..144363,147719..147793,148406..148533,148802..148933,149075..149226,153527..153652,154188..154298)
location: region:131720-154298:1
so has part: feature:131720-131729:1:exon
so has part: feature:132461-132579:1:exon
so has part: feature:132886-133039:1:exon
so has part: feature:133731-133951:1:exon
so has part: feature:135190-135286:1:exon
so has part: feature:138423-138449:1:exon
so has part: feature:139249-139452:1:exon
so has part: feature:144186-144363:1:exon
so has part: feature:147719-147793:1:exon
so has part: feature:148406-148533:1:exon
so has part: feature:148802-148933:1:exon
so has part: feature:149075-149226:1:exon
so has part: feature:153527-153652:1:exon
so has part: feature:154188-154298:1:exon

XP_010715419.1
type: Protein
SIO_000068: ncbiprotein

position:154298:1
position: 154298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131720-131729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132461-132579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132886-133039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133731-133951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135190-135286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138423-138449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139249-139452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:144186-144363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147719-147793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148406-148533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148802-148933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:149075-149226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153527-153652:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:154188-154298:1:exon

LOC104912747
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mucosa-associated lymphoid tissue lymphoma translocation protein 1-like isoform X4
translation: MQTAIVITEQPVSVSVPVGYSFTLHCRAEAHTSLQYQWFCQCQSVRYQIPGATKQDLPITAQQTQLYTCRINDLYRNVIFSDWVKVEVHPYVAGGLLPQLWQGEPVIILNPTDQKVEVGKPLQLQCAAVGVPAPSYQWYRNGNVLEHQKKKKLWVTLPRDGSETLATEITQTKVSDSGTYLCCASNSRGEHWTNAVDIRIGTCRSEKLFATGKLALLVGNNHYQHHPNLMAPVTDVFELSLLLKQLGFQVVSLLDLNKAEMVAAVSRFLQLLEKGVYAIFYYAGHGYEHLGRNYMVPVDAPQLYAPENCISVQRILQKMQQQQTALNLILLDTCRKWYNPECALSQVQPLEPWGNTVYGYATSEDAEAYELQDGEFSSGIFMKYLKKHILQEKKVTHMLEDVLEDLGRDPMVTGKQVMEIKHTLKEARSLTDPICPMGAAAERWGCSHEPPSETVTFPCGVQAELRFHRLFSNVLSVCAKLQDLPVHVTDAQLMLRQPTEVDDVANLEESHPDQMDSLLTSVYKQEELDCVFQLCGLQKIQFFLL
SIO_010081: LOC104912747
subclass of: SO_0000673
so part of: LOC104912747
location: join(131720..131729,132461..132579,132886..133039,133731..133951,135190..135286,138423..138449,139249..139452,144186..144363,147719..147793,148406..148533,148802..148933,149075..149226,153527..153652,154173..154187)
location: region:131720-154187:1
so has part: feature:131720-131729:1:exon
so has part: feature:132461-132579:1:exon
so has part: feature:132886-133039:1:exon
so has part: feature:133731-133951:1:exon
so has part: feature:135190-135286:1:exon
so has part: feature:138423-138449:1:exon
so has part: feature:139249-139452:1:exon
so has part: feature:144186-144363:1:exon
so has part: feature:147719-147793:1:exon
so has part: feature:148406-148533:1:exon
so has part: feature:148802-148933:1:exon
so has part: feature:149075-149226:1:exon
so has part: feature:153527-153652:1:exon
so has part: feature:154173-154187:1:exon

XP_031411098.1
type: Protein
SIO_000068: ncbiprotein

position:154187:1
position: 154187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131720-131729:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:132461-132579:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:132886-133039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:133731-133951:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:135190-135286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:138423-138449:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:139249-139452:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:144186-144363:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147719-147793:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:148406-148533:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:148802-148933:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:149075-149226:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153527-153652:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:154173-154187:1:exon

ZNF592
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ZNF592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 175261..205662
location: region:175261-205662:1
so has part: feature:175261-205662:1:exon
subclass of: SO_0000010

100551013
type: Gene
SIO_000068: ncbigene

position:175261:1
position: 175261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:205662:1
position: 205662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175261-205662:1:exon

ZNF592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZNF592
product: zinc finger protein 592, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_031555239.1
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(175261..177629,188563..188741,192437..192613,193428..193587,197443..197721,199132..199244,201424..201565,202437..202572)
location: region:175261-202572:1
so has part: feature:175261-177629:1:exon
so has part: feature:188563-188741:1:exon
so has part: feature:192437-192613:1:exon
so has part: feature:193428-193587:1:exon
so has part: feature:197443-197721:1:exon
so has part: feature:199132-199244:1:exon
so has part: feature:201424-201565:1:exon
so has part: feature:202437-202572:1:exon

position:202572:1
position: 202572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175261-177629:1:exon

position:177629:1
position: 177629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188563-188741:1:exon

position:188563:1
position: 188563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188741:1
position: 188741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:192437-192613:1:exon

position:192437:1
position: 192437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192613:1
position: 192613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:193428-193587:1:exon

position:193428:1
position: 193428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:193587:1
position: 193587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197443-197721:1:exon

position:197443:1
position: 197443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197721:1
position: 197721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:199132-199244:1:exon

position:199132:1
position: 199132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199244:1
position: 199244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:201424-201565:1:exon

position:201424:1
position: 201424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:201565:1
position: 201565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:202437-202572:1:exon

position:202437:1
position: 202437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZNF592
product: zinc finger protein 592, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_019619339.2
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(175261..177629,188563..188741,192437..192613,193428..193587,197443..197721,199132..199244,200774..201349)
location: region:175261-201349:1
so has part: feature:175261-177629:1:exon
so has part: feature:188563-188741:1:exon
so has part: feature:192437-192613:1:exon
so has part: feature:193428-193587:1:exon
so has part: feature:197443-197721:1:exon
so has part: feature:199132-199244:1:exon
so has part: feature:200774-201349:1:exon

position:201349:1
position: 201349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175261-177629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188563-188741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192437-192613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193428-193587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197443-197721:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199132-199244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:200774-201349:1:exon

position:200774:1
position: 200774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZNF592
product: zinc finger protein 592, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_010717118.2
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(175290..177629,188563..188741,192437..192613,193428..193587,197443..197721,199132..199244,202437..202572,203860..205662)
location: region:175290-205662:1
so has part: feature:175290-177629:1:exon
so has part: feature:188563-188741:1:exon
so has part: feature:192437-192613:1:exon
so has part: feature:193428-193587:1:exon
so has part: feature:197443-197721:1:exon
so has part: feature:199132-199244:1:exon
so has part: feature:202437-202572:1:exon
so has part: feature:203860-205662:1:exon

position:175290:1
position: 175290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175290-177629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188563-188741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192437-192613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193428-193587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197443-197721:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199132-199244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:202437-202572:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203860-205662:1:exon

position:203860:1
position: 203860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZNF592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 592 isoform X1
translation: MGDMKTPDFDDLLAAFDIPDPTSLDAKETIPSAGEENENHLKSSGICIDENVSLSHSLPPSDAPVVSVIVKNTSRQESFEAEKEGNHLGTGLLHNGFRGSDLPSEAHALVHNYGKFESTFINGDSSRSYSEKLDQSKSEPLPTFSQFSPISSPEPEDTFKENSIGDKPKHAQTPYFPPPSMYMPTGASVLDHFRKVPEPELSMFDQYCKKEQKMEIHFQPESRLEMSRREQDKATERFVESGKDLVDTNSFLGEGLVFGELPHSNLGEDKGSVPELNLSSSVPPRQRLKPTHSKLSSCVAALVALQAKKVACVPKGDQPNLIKEPGPFKDGTKGSPKMPKSPKSPRSPLEVVRKASKQPESPRSVCSDSSGKGSPSMAASSPPAIPKVRIKTIKTSSGEIKRTVTRILPESDELGKSLEESPLETSSAEEFIKSFPSPDTSAAMESEASKNSTKNGATVAIQLSNIVNPYTDGLKADVAANTASLVSLSPLPNCGGGAVKVGVAGQQLNKKQHQQQGIVVQPSNVTTSSSLLPKAVHLANLNLVPHSVAASVTAKSSVQRRNQPQVTQMSVPLVHQVKKAAPVIVEAFNKVLHSANPVPIYTPNLSPPPDTSINLPASGYCCLECGDSFALEKSLTQHYSRRSVHIEVMCTQCSTMLLFFNKCSLLKHARDHKSKGFIMQCSQLVMKPISLDQMFSPSASSSASSTPQTLHLSSPSRKPNATSGNGVGISTNTQPALPLYPDPLRLIRQGLKCLECNKQAQDYVALAAHYQRTSEDNERLTCQVCQMMLPNQCSYCAHQRIHAHKSPYCCPECGAVCRSAYFQTHVRENCLHYSRKVGFRCIHCGVVFMTLALLKVHIHEKHCEVFHKCSFCPMAFKSADSTMAHVTSQHPAEPHKTTQVIYKCSCETVFNKKKLLQEHFQQNTNKLLVGVFKCPQCQLVYMQKQQLMQHVKGVHGVPQNPEELLSFRQKSEKMSKNQVHNPPKELSVANGTSHSPLPRGDMRVEGHNPESKSRLRRTGWTCKECSQWIPDRETYVSHMKRSHGRAMKRYPCRQCERSFNASNSLRRHIRNNHDTAKKVYTCWYCTDENQTFPQPFMLENHISLMHGIKNPDLSQMAKAKASERDTAEARSPKRMTMNELGQAETTAGSDAPPAKKLKAHWKCAKCGFATDVSTEFQEHIPQHKTDSSTYQCLFCGLCYTSQISLNRHLFIVHKVKDEEEEEEEEGEEEQEEGEEEREKLRAETNENGHEGYNGEMNTIVEEESLECKECKSDSALCEHRQTCGVEGPRSTSQNNHSKSVKT
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(175290..177629,188563..188741,192437..192613,193428..193587,197443..197721,199132..199244,202437..202572,203860..204384)
location: region:175290-204384:1
so has part: feature:175290-177629:1:exon
so has part: feature:188563-188741:1:exon
so has part: feature:192437-192613:1:exon
so has part: feature:193428-193587:1:exon
so has part: feature:197443-197721:1:exon
so has part: feature:199132-199244:1:exon
so has part: feature:202437-202572:1:exon
so has part: feature:203860-204384:1:exon

XP_010715420.1
type: Protein
SIO_000068: ncbiprotein

position:204384:1
position: 204384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175290-177629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188563-188741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192437-192613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193428-193587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197443-197721:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199132-199244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:202437-202572:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:203860-204384:1:exon

ZNF592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZNF592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 592 isoform X2
translation: MGDMKTPDFDDLLAAFDIPDPTSLDAKETIPSAGEENENHLKSSGICIDENVSLSHSLPPSDAPVVSVIVKNTSRQESFEAEKEGNHLGTGLLHNGFRGSDLPSEAHALVHNYGKFESTFINGDSSRSYSEKLDQSKSEPLPTFSQFSPISSPEPEDTFKENSIGDKPKHAQTPYFPPPSMYMPTGASVLDHFRKVPEPELSMFDQYCKKEQKMEIHFQPESRLEMSRREQDKATERFVESGKDLVDTNSFLGEGLVFGELPHSNLGEDKGSVPELNLSSSVPPRQRLKPTHSKLSSCVAALVALQAKKVACVPKGDQPNLIKEPGPFKDGTKGSPKMPKSPKSPRSPLEVVRKASKQPESPRSVCSDSSGKGSPSMAASSPPAIPKVRIKTIKTSSGEIKRTVTRILPESDELGKSLEESPLETSSAEEFIKSFPSPDTSAAMESEASKNSTKNGATVAIQLSNIVNPYTDGLKADVAANTASLVSLSPLPNCGGGAVKVGVAGQQLNKKQHQQQGIVVQPSNVTTSSSLLPKAVHLANLNLVPHSVAASVTAKSSVQRRNQPQVTQMSVPLVHQVKKAAPVIVEAFNKVLHSANPVPIYTPNLSPPPDTSINLPASGYCCLECGDSFALEKSLTQHYSRRSVHIEVMCTQCSTMLLFFNKCSLLKHARDHKSKGFIMQCSQLVMKPISLDQMFSPSASSSASSTPQTLHLSSPSRKPNATSGNGVGISTNTQPALPLYPDPLRLIRQGLKCLECNKQAQDYVALAAHYQRTSEDNERLTCQVCQMMLPNQCSYCAHQRIHAHKSPYCCPECGAVCRSAYFQTHVRENCLHYSRKVGFRCIHCGVVFMTLALLKVHIHEKHCEVFHKCSFCPMAFKSADSTMAHVTSQHPAEPHKTTQVIYKCSCETVFNKKKLLQEHFQQNTNKLLVGVFKCPQCQLVYMQKQQLMQHVKGVHGVPQNPEELLSFRQKSEKMSKNQVHNPPKELSVANGTSHSPLPRGDMRVEGHNPESKSRLRRTGWTCKECSQWIPDRETYVSHMKRSHGRAMKRYPCRQCERSFNASNSLRRHIRNNHDTAKKVYTCCGEAGRSVEIFFSPVKKDLCLPDMLHPRFAAFHPLLPVFQLQFVHCREVLHR
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(175290..177629,188563..188741,192437..192613,193428..193587,197443..197721,199132..199244,201424..201565,202437..202451)
location: region:175290-202451:1
so has part: feature:175290-177629:1:exon
so has part: feature:188563-188741:1:exon
so has part: feature:192437-192613:1:exon
so has part: feature:193428-193587:1:exon
so has part: feature:197443-197721:1:exon
so has part: feature:199132-199244:1:exon
so has part: feature:201424-201565:1:exon
so has part: feature:202437-202451:1:exon

XP_031411099.1
type: Protein
SIO_000068: ncbiprotein

position:202451:1
position: 202451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175290-177629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188563-188741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192437-192613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193428-193587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197443-197721:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199132-199244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:201424-201565:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:202437-202451:1:exon

ZNF592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZNF592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 592 isoform X3
translation: MGDMKTPDFDDLLAAFDIPDPTSLDAKETIPSAGEENENHLKSSGICIDENVSLSHSLPPSDAPVVSVIVKNTSRQESFEAEKEGNHLGTGLLHNGFRGSDLPSEAHALVHNYGKFESTFINGDSSRSYSEKLDQSKSEPLPTFSQFSPISSPEPEDTFKENSIGDKPKHAQTPYFPPPSMYMPTGASVLDHFRKVPEPELSMFDQYCKKEQKMEIHFQPESRLEMSRREQDKATERFVESGKDLVDTNSFLGEGLVFGELPHSNLGEDKGSVPELNLSSSVPPRQRLKPTHSKLSSCVAALVALQAKKVACVPKGDQPNLIKEPGPFKDGTKGSPKMPKSPKSPRSPLEVVRKASKQPESPRSVCSDSSGKGSPSMAASSPPAIPKVRIKTIKTSSGEIKRTVTRILPESDELGKSLEESPLETSSAEEFIKSFPSPDTSAAMESEASKNSTKNGATVAIQLSNIVNPYTDGLKADVAANTASLVSLSPLPNCGGGAVKVGVAGQQLNKKQHQQQGIVVQPSNVTTSSSLLPKAVHLANLNLVPHSVAASVTAKSSVQRRNQPQVTQMSVPLVHQVKKAAPVIVEAFNKVLHSANPVPIYTPNLSPPPDTSINLPASGYCCLECGDSFALEKSLTQHYSRRSVHIEVMCTQCSTMLLFFNKCSLLKHARDHKSKGFIMQCSQLVMKPISLDQMFSPSASSSASSTPQTLHLSSPSRKPNATSGNGVGISTNTQPALPLYPDPLRLIRQGLKCLECNKQAQDYVALAAHYQRTSEDNERLTCQVCQMMLPNQCSYCAHQRIHAHKSPYCCPECGAVCRSAYFQTHVRENCLHYSRKVGFRCIHCGVVFMTLALLKVHIHEKHCEVFHKCSFCPMAFKSADSTMAHVTSQHPAEPHKTTQVIYKCSCETVFNKKKLLQEHFQQNTNKLLVGVFKCPQCQLVYMQKQQLMQHVKGVHGVPQNPEELLSFRQKSEKMSKNQVHNPPKELSVANGTSHSPLPRGDMRVEGHNPESKSRLRRTGWTCKECSQWIPDRETYVSHMKRSHGRAMKRYPCRQCERSFNASNSLRRHIRNNHDTAKKVYTC
SIO_010081: ZNF592
subclass of: SO_0000673
so part of: ZNF592
location: join(175290..177629,188563..188741,192437..192613,193428..193587,197443..197721,199132..199244,200774)
location: region:175290-200774:1
so has part: feature:175290-177629:1:exon
so has part: feature:188563-188741:1:exon
so has part: feature:192437-192613:1:exon
so has part: feature:193428-193587:1:exon
so has part: feature:197443-197721:1:exon
so has part: feature:199132-199244:1:exon
so has part: feature:200774-200774:1:exon

XP_019474884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:175290-177629:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188563-188741:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:192437-192613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:193428-193587:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:197443-197721:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:199132-199244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:200774-200774:1:exon

SEC11A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SEC11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 206557..215910
location: region:206557-215910:1
so has part: feature:206557-215910:1:exon
subclass of: SO_0000010

100538486
type: Gene
SIO_000068: ncbigene

position:206557:1
position: 206557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215910:1
position: 215910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206557-215910:1:exon

SEC11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SEC11A
product: SEC11 homolog A, signal peptidase complex subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 135 samples with support for all annotated introns
transcript id: XM_031555191.1
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(206557..206699,213724..213843,215214..215271,215425..215910)
location: region:206557-215910:1
so has part: feature:206557-206699:1:exon
so has part: feature:213724-213843:1:exon
so has part: feature:215214-215271:1:exon
so has part: feature:215425-215910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:206557-206699:1:exon

position:206699:1
position: 206699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:213724-213843:1:exon

position:213724:1
position: 213724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213843:1
position: 213843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:215214-215271:1:exon

position:215214:1
position: 215214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215271:1
position: 215271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:215425-215910:1:exon

position:215425:1
position: 215425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEC11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SEC11A
product: SEC11 homolog A, signal peptidase complex subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010717159.3
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(206562..206699,209247..209396,213724..213843,215214..215271,215425..215724)
location: region:206562-215724:1
so has part: feature:206562-206699:1:exon
so has part: feature:209247-209396:1:exon
so has part: feature:213724-213843:1:exon
so has part: feature:215214-215271:1:exon
so has part: feature:215425-215724:1:exon

position:206562:1
position: 206562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215724:1
position: 215724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206562-206699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209247-209396:1:exon

position:209247:1
position: 209247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209396:1
position: 209396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:213724-213843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215214-215271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215425-215724:1:exon

SEC11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SEC11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptidase complex catalytic subunit SEC11A isoform X1
translation: MIVSSALMIWKGLMVVTGSESPIVVVLSGSMEPAFHRGDLLFLTNRIEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQNGDIKFLTKGDNNAVDDRGLYKRGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(206617..206699,209247..209396,213724..213843,215214..215271,215425..215475)
location: region:206617-215475:1
so has part: feature:206617-206699:1:exon
so has part: feature:209247-209396:1:exon
so has part: feature:213724-213843:1:exon
so has part: feature:215214-215271:1:exon
so has part: feature:215425-215475:1:exon

XP_010715461.1
type: Protein
SIO_000068: ncbiprotein

position:206617:1
position: 206617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:215475:1
position: 215475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206617-206699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209247-209396:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:213724-213843:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215214-215271:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:215425-215475:1:exon

SEC11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SEC11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptidase complex catalytic subunit SEC11A isoform X2
translation: MIVSSALMIWKGLMVVTGSESPIVVVLRQNGDIKFLTKGDNNAVDDRGLYKRGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE
SIO_010081: SEC11A
subclass of: SO_0000673
so part of: SEC11A
location: join(206617..206699,213724..213843,215214..215271,215425..215475)
location: region:206617-215475:1
so has part: feature:206617-206699:1:exon
so has part: feature:213724-213843:1:exon
so has part: feature:215214-215271:1:exon
so has part: feature:215425-215475:1:exon

XP_031411051.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:206617-206699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:213724-213843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:215214-215271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:215425-215475:1:exon

NMB
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NMB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 225586..229386
location: region:225586-229386:1
so has part: feature:225586-229386:1:exon
subclass of: SO_0000010

100551320
type: Gene
SIO_000068: ncbigene

position:225586:1
position: 225586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229386:1
position: 229386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225586-229386:1:exon

NMB
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: NMB
product: neuromedin B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002118753.1
SIO_010081: NMB
so part of: NMB
location: join(225586..226241,226702..226904,227661..227767,227917..228005,229088..229386)
location: region:225586-229386:1
so has part: feature:225586-226241:1:exon
so has part: feature:226702-226904:1:exon
so has part: feature:227661-227767:1:exon
so has part: feature:227917-228005:1:exon
so has part: feature:229088-229386:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:225586-226241:1:exon

position:226241:1
position: 226241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:226702-226904:1:exon

position:226702:1
position: 226702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:226904:1
position: 226904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:227661-227767:1:exon

position:227661:1
position: 227661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:227767:1
position: 227767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:227917-228005:1:exon

position:227917:1
position: 227917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228005:1
position: 228005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:229088-229386:1:exon

position:229088:1
position: 229088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NMB
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: NMB
product: neuromedin B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002118754.1
SIO_010081: NMB
so part of: NMB
location: join(225587..226241,226702..226904,227664..227767,227917..228005,229088..229386)
location: region:225587-229386:1
so has part: feature:225587-226241:1:exon
so has part: feature:226702-226904:1:exon
so has part: feature:227664-227767:1:exon
so has part: feature:227917-228005:1:exon
so has part: feature:229088-229386:1:exon

position:225587:1
position: 225587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225587-226241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226702-226904:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227664-227767:1:exon

position:227664:1
position: 227664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:227917-228005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229088-229386:1:exon

NMB
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: NMB
product: neuromedin B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_794865.2
SIO_010081: NMB
so part of: NMB
location: join(225589..226241,226702..226904,227917..228005,229088..229385)
location: region:225589-229385:1
so has part: feature:225589-226241:1:exon
so has part: feature:226702-226904:1:exon
so has part: feature:227917-228005:1:exon
so has part: feature:229088-229385:1:exon

position:225589:1
position: 225589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229385:1
position: 229385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225589-226241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226702-226904:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:227917-228005:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229088-229385:1:exon

NMB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NMB
product: neuromedin B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_003209298.4
SIO_010081: NMB
subclass of: SO_0000673
so part of: NMB
location: join(225596..226241,226702..226904,229088..229383)
location: region:225596-229383:1
so has part: feature:225596-226241:1:exon
so has part: feature:226702-226904:1:exon
so has part: feature:229088-229383:1:exon

position:225596:1
position: 225596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229383:1
position: 229383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:225596-226241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226702-226904:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229088-229383:1:exon

NMB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NMB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuromedin-B
translation: MAVMCCLLLLLCGAALGPAVHLDFTEHRSQAAKIKVNPRGNLWATGHFMGKKSVPGTPRLDELRQPAVPMAFGPSLRALLEDVVELLTRELLKILLQERLLDENQRKYDLTDEETGLLTKVLEKYFSN
SIO_010081: NMB
subclass of: SO_0000673
so part of: NMB
location: join(226106..226241,226702..226904,229088..229135)
location: region:226106-229135:1
so has part: feature:226106-226241:1:exon
so has part: feature:226702-226904:1:exon
so has part: feature:229088-229135:1:exon

XP_003209346.1
type: Protein
SIO_000068: ncbiprotein

position:226106:1
position: 226106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:229135:1
position: 229135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:226106-226241:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:226702-226904:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:229088-229135:1:exon

LOC100538640
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100538640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 236626..240772
location: region:236626-240772:1
so has part: feature:236626-240772:1:exon
subclass of: SO_0000010

100538640
type: Gene
SIO_000068: ncbigene

position:236626:1
position: 236626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:240772:1
position: 240772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236626-240772:1:exon

LOC100538640
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100538640
product: dual oxidase maturation factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555196.1
SIO_010081: LOC100538640
subclass of: SO_0000673
so part of: LOC100538640
location: join(236626..236717,236830..236983,237797..237854,238538..238672,238809..239022,239704..239918,240558..240772)
location: region:236626-240772:1
so has part: feature:236626-236717:1:exon
so has part: feature:236830-236983:1:exon
so has part: feature:237797-237854:1:exon
so has part: feature:238538-238672:1:exon
so has part: feature:238809-239022:1:exon
so has part: feature:239704-239918:1:exon
so has part: feature:240558-240772:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:236626-236717:1:exon

position:236717:1
position: 236717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:236830-236983:1:exon

position:236830:1
position: 236830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:236983:1
position: 236983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:237797-237854:1:exon

position:237797:1
position: 237797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237854:1
position: 237854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:238538-238672:1:exon

position:238538:1
position: 238538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:238672:1
position: 238672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:238809-239022:1:exon

position:238809:1
position: 238809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239022:1
position: 239022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:239704-239918:1:exon

position:239704:1
position: 239704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:239918:1
position: 239918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:240558-240772:1:exon

position:240558:1
position: 240558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100538640
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100538640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual oxidase maturation factor 1
translation: MAVQKDWHKPLNPHPPWRCAPVVVPNTLGQDNRMTLWDGSFPFYPGTNACFPFDTTWAIIASVFLSALVTSIIILPGIRGKGRLFWLLRVVTSLFIGAVVLTIQFTRDWESGWVTANTSYKSFSLAVVNVDIGLHIGLAGVNITLVGNPVNQVNETINYNEHFAWSFDADYDHSYSKSLEKGLPSPILYVAEKFTTQSPCNVHRQYRISSRYASITLWMALCTWLISILLFSMPVLLYGGYMFLLTAVLMLFSLLFFVMVRNIPKCPIQFGPASLKTDYGRSFWLTLTTGLLCLLLGLGVIVLNSVHPQKLKLVFNLDEGRREDVDGWDKSHLPAESSSSEQDILMVSLGELCEVTATKL
SIO_010081: LOC100538640
subclass of: SO_0000673
so part of: LOC100538640
location: join(236626..236717,236830..236983,237797..237854,238538..238672,238809..239022,239704..239918,240558..240772)
location: region:236626-240772:1
so has part: feature:236626-236717:1:exon
so has part: feature:236830-236983:1:exon
so has part: feature:237797-237854:1:exon
so has part: feature:238538-238672:1:exon
so has part: feature:238809-239022:1:exon
so has part: feature:239704-239918:1:exon
so has part: feature:240558-240772:1:exon

XP_031411056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:236626-236717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:236830-236983:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:237797-237854:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:238538-238672:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:238809-239022:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:239704-239918:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:240558-240772:1:exon

DUOXA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DUOXA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(242781..254913)
location: region:242781-254913:-1
so has part: feature:242781-254913:-1:exon
subclass of: SO_0000010

100538795
type: Gene
SIO_000068: ncbigene

position:242781:-1
position: 242781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:254913:-1
position: 254913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242781-254913:-1:exon

DUOXA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DUOXA2
product: dual oxidase maturation factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_010717157.3
SIO_010081: DUOXA2
subclass of: SO_0000673
so part of: DUOXA2
location: complement(join(242781..244009,244460..244674,248780..248993,249187..249321,252014..252071,252211..252509,253750..253840,254815..254913))
location: region:242781-254913:-1
so has part: feature:254815-254913:-1:exon
so has part: feature:253750-253840:-1:exon
so has part: feature:252211-252509:-1:exon
so has part: feature:252014-252071:-1:exon
so has part: feature:249187-249321:-1:exon
so has part: feature:248780-248993:-1:exon
so has part: feature:244460-244674:-1:exon
so has part: feature:242781-244009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254815-254913:-1:exon

position:254815:-1
position: 254815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:253750-253840:-1:exon

position:253750:-1
position: 253750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:253840:-1
position: 253840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:252211-252509:-1:exon

position:252211:-1
position: 252211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252509:-1
position: 252509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:252014-252071:-1:exon

position:252014:-1
position: 252014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252071:-1
position: 252071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:249187-249321:-1:exon

position:249187:-1
position: 249187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249321:-1
position: 249321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:248780-248993:-1:exon

position:248780:-1
position: 248780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248993:-1
position: 248993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:244460-244674:-1:exon

position:244460:-1
position: 244460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244674:-1
position: 244674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:242781-244009:-1:exon

position:244009:-1
position: 244009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DUOXA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DUOXA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual oxidase maturation factor 2
translation: MTLFDGIYPFYPQQRKSFVFDVSTIIVVIVFLMLASTFLLIIPGIRGRARLYWMIRVLFSLMVGVMIVVVQFTGDWESGWVTANTSYKSFSLAVVNVDIGLHIGLAGVNVTLVGNPVHQVNETINYNEHFAWSFDADYDHSYSKSLEKGLPSPILYVAEKFTTQSPCNVHRQYRISSHYASASLWVAFCTWFISNMLFSTPVLVYGGYMILITGAFMIFSLLSFSTVRNSLVCPIQFGTTSLQIGYGGSFWLTLAVGLLCFVAGITVVALHYFNSDLLKTFFDLHEDKAEDYRETTEVYVNLQFLNSVLSPPQTSKLIPNDI
SIO_010081: DUOXA2
subclass of: SO_0000673
so part of: DUOXA2
location: complement(join(243810..244009,244460..244674,248780..248993,249187..249321,252014..252071,252211..252357))
location: region:243810-252357:-1
so has part: feature:252211-252357:-1:exon
so has part: feature:252014-252071:-1:exon
so has part: feature:249187-249321:-1:exon
so has part: feature:248780-248993:-1:exon
so has part: feature:244460-244674:-1:exon
so has part: feature:243810-244009:-1:exon

XP_010715459.1
type: Protein
SIO_000068: ncbiprotein

position:243810:-1
position: 243810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:252357:-1
position: 252357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:252211-252357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:252014-252071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:249187-249321:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:248780-248993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:244460-244674:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:243810-244009:-1:exon

DUOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DUOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 249670..277028
location: region:249670-277028:1
so has part: feature:249670-277028:1:exon
subclass of: SO_0000010

100538948
type: Gene
SIO_000068: ncbigene

position:249670:1
position: 249670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:277028:1
position: 277028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:249670-277028:1:exon

DUOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DUOX2
product: dual oxidase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019619299.2
SIO_010081: DUOX2
subclass of: SO_0000673
so part of: DUOX2
location: join(249670..249692,259451..259542,260148..260228,261118..261282,262040..262227,263197..263398,263864..264030,264103..264163,264264..264360,264491..264578,265264..265363,265628..265791,265989..266152,266322..266440,267119..267256,267359..267472,268293..268495,268607..268792,269162..269387,270021..270114,270342..270517,270695..270761,271073..271165,271942..272120,272910..273140,273308..273407,273534..273583,273665..273792,273969..274122,274684..274916,275252..275410,275573..275728,275809..275937,276186..277028)
location: region:249670-277028:1
so has part: feature:249670-249692:1:exon
so has part: feature:259451-259542:1:exon
so has part: feature:260148-260228:1:exon
so has part: feature:261118-261282:1:exon
so has part: feature:262040-262227:1:exon
so has part: feature:263197-263398:1:exon
so has part: feature:263864-264030:1:exon
so has part: feature:264103-264163:1:exon
so has part: feature:264264-264360:1:exon
so has part: feature:264491-264578:1:exon
so has part: feature:265264-265363:1:exon
so has part: feature:265628-265791:1:exon
so has part: feature:265989-266152:1:exon
so has part: feature:266322-266440:1:exon
so has part: feature:267119-267256:1:exon
so has part: feature:267359-267472:1:exon
so has part: feature:268293-268495:1:exon
so has part: feature:268607-268792:1:exon
so has part: feature:269162-269387:1:exon
so has part: feature:270021-270114:1:exon
so has part: feature:270342-270517:1:exon
so has part: feature:270695-270761:1:exon
so has part: feature:271073-271165:1:exon
so has part: feature:271942-272120:1:exon
so has part: feature:272910-273140:1:exon
so has part: feature:273308-273407:1:exon
so has part: feature:273534-273583:1:exon
so has part: feature:273665-273792:1:exon
so has part: feature:273969-274122:1:exon
so has part: feature:274684-274916:1:exon
so has part: feature:275252-275410:1:exon
so has part: feature:275573-275728:1:exon
so has part: feature:275809-275937:1:exon
so has part: feature:276186-277028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249670-249692:1:exon

position:249692:1
position: 249692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259451-259542:1:exon

position:259451:1
position: 259451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259542:1
position: 259542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:260148-260228:1:exon

position:260148:1
position: 260148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:260228:1
position: 260228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:261118-261282:1:exon

position:261118:1
position: 261118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261282:1
position: 261282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262040-262227:1:exon

position:262040:1
position: 262040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262227:1
position: 262227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:263197-263398:1:exon

position:263197:1
position: 263197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263398:1
position: 263398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:263864-264030:1:exon

position:263864:1
position: 263864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264030:1
position: 264030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:264103-264163:1:exon

position:264103:1
position: 264103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264163:1
position: 264163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:264264-264360:1:exon

position:264264:1
position: 264264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264360:1
position: 264360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:264491-264578:1:exon

position:264491:1
position: 264491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:264578:1
position: 264578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:265264-265363:1:exon

position:265264:1
position: 265264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265363:1
position: 265363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:265628-265791:1:exon

position:265628:1
position: 265628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:265791:1
position: 265791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:265989-266152:1:exon

position:265989:1
position: 265989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266152:1
position: 266152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:266322-266440:1:exon

position:266322:1
position: 266322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:266440:1
position: 266440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:267119-267256:1:exon

position:267119:1
position: 267119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267256:1
position: 267256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:267359-267472:1:exon

position:267359:1
position: 267359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:267472:1
position: 267472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:268293-268495:1:exon

position:268293:1
position: 268293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268495:1
position: 268495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:268607-268792:1:exon

position:268607:1
position: 268607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:268792:1
position: 268792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:269162-269387:1:exon

position:269162:1
position: 269162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:269387:1
position: 269387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:270021-270114:1:exon

position:270021:1
position: 270021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270114:1
position: 270114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:270342-270517:1:exon

position:270342:1
position: 270342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270517:1
position: 270517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:270695-270761:1:exon

position:270695:1
position: 270695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:270761:1
position: 270761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:271073-271165:1:exon

position:271073:1
position: 271073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271165:1
position: 271165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:271942-272120:1:exon

position:271942:1
position: 271942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:272120:1
position: 272120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:272910-273140:1:exon

position:272910:1
position: 272910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273140:1
position: 273140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:273308-273407:1:exon

position:273308:1
position: 273308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273407:1
position: 273407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:273534-273583:1:exon

position:273534:1
position: 273534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273583:1
position: 273583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:273665-273792:1:exon

position:273665:1
position: 273665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:273792:1
position: 273792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:273969-274122:1:exon

position:273969:1
position: 273969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274122:1
position: 274122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:274684-274916:1:exon

position:274684:1
position: 274684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274916:1
position: 274916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:275252-275410:1:exon

position:275252:1
position: 275252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275410:1
position: 275410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:275573-275728:1:exon

position:275573:1
position: 275573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275728:1
position: 275728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:275809-275937:1:exon

position:275809:1
position: 275809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:275937:1
position: 275937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:276186-277028:1:exon

position:276186:1
position: 276186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DUOX2
product: dual oxidase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_010717155.3
SIO_010081: DUOX2
subclass of: SO_0000673
so part of: DUOX2
location: join(256864..256929,259451..259542,260148..260228,261118..261282,262040..262227,263197..263398,263864..264030,264103..264163,264264..264360,264491..264578,265264..265363,265628..265791,265989..266152,266322..266440,267119..267256,267359..267472,268293..268495,268607..268792,269162..269387,270021..270114,270342..270517,270695..270761,271073..271165,271942..272120,272910..273140,273308..273407,273534..273583,273665..273792,273969..274122,274684..274916,275252..275410,275573..275728,275809..275937,276186..277028)
location: region:256864-277028:1
so has part: feature:256864-256929:1:exon
so has part: feature:259451-259542:1:exon
so has part: feature:260148-260228:1:exon
so has part: feature:261118-261282:1:exon
so has part: feature:262040-262227:1:exon
so has part: feature:263197-263398:1:exon
so has part: feature:263864-264030:1:exon
so has part: feature:264103-264163:1:exon
so has part: feature:264264-264360:1:exon
so has part: feature:264491-264578:1:exon
so has part: feature:265264-265363:1:exon
so has part: feature:265628-265791:1:exon
so has part: feature:265989-266152:1:exon
so has part: feature:266322-266440:1:exon
so has part: feature:267119-267256:1:exon
so has part: feature:267359-267472:1:exon
so has part: feature:268293-268495:1:exon
so has part: feature:268607-268792:1:exon
so has part: feature:269162-269387:1:exon
so has part: feature:270021-270114:1:exon
so has part: feature:270342-270517:1:exon
so has part: feature:270695-270761:1:exon
so has part: feature:271073-271165:1:exon
so has part: feature:271942-272120:1:exon
so has part: feature:272910-273140:1:exon
so has part: feature:273308-273407:1:exon
so has part: feature:273534-273583:1:exon
so has part: feature:273665-273792:1:exon
so has part: feature:273969-274122:1:exon
so has part: feature:274684-274916:1:exon
so has part: feature:275252-275410:1:exon
so has part: feature:275573-275728:1:exon
so has part: feature:275809-275937:1:exon
so has part: feature:276186-277028:1:exon

position:256864:1
position: 256864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:256864-256929:1:exon

position:256929:1
position: 256929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:259451-259542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:260148-260228:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:261118-261282:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262040-262227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263197-263398:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:263864-264030:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264103-264163:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264264-264360:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:264491-264578:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:265264-265363:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:265628-265791:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:265989-266152:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:266322-266440:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267119-267256:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:267359-267472:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:268293-268495:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:268607-268792:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:269162-269387:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:270021-270114:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:270342-270517:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:270695-270761:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:271073-271165:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:271942-272120:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:272910-273140:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:273308-273407:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:273534-273583:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:273665-273792:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:273969-274122:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:274684-274916:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:275252-275410:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:275573-275728:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:275809-275937:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:276186-277028:1:exon

DUOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DUOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual oxidase 2
translation: MQHTEMTSCLTMVLLMSWALGGAQNISWEVQRYDGWYNNLQHHSRGSVGSRLLRLLPANYADGVYQALQEPHVPNARQLSNAVARGPSGLPSQRNTTVLAVFFGFHVLSDILGTEKPGCPAEFLNIHIPEGDPVFDPAGTGDIVLPFQRIRWALETGQSPNSPREQTNEVTGWLDGSSIYGPSHSWSDALRNFSNGQLAAGPGGYVPRETDGKVPMWKALDPSTGQGGPHGIYDLGNAWGNENRFLQAISIAWFRYHNYLAAELANDHPSWSDEDIFQHARKRVIATFQSIVLYEWLPALLGTPVQTYTGYQQHLDPSLSPEFVAVARMFLATMVPPGVYKRDPSCHLRNTSSSSDPLPAVRLCNSYWSRESTEMQQEDVDDLLLGMSSQIAEQEDSIVVEDLQDYWYGPLKYSRTDYVASWLQRGRDLGLPTYNQARERFGLEPLQDWTNFAPHSQQKALEVAALYANNTARLELLPGGMLEGDSPLFSAIILDQFVRLRDGDRFWFENTRNGLFTEKEAEEIRNTTFRDVLAAVTYSQQAELQSNVFVWSEGDPCPQPQQLTAQLLANCTPMTVLDYFEGSGAGFGIIIIVLCCLPLVSLFVAWIIATLRKRDFKKLQKKKKASVRREVTGEAIHAMEWHGPKTDSSLVYIQLQADKVLKVLDGRGLVLRSVNLKAQQRVEVILSSNKGNKALLLKSPKEYDLVLLFSEEAERSSFLGKLQDFLKTSCLELHVSEMKEQSLLKRAVTQEQRKQILETFFRHLFAQMLDINKTDAGELNFESSQKAKESLTCELSRAEFAEALGLKANSMFVDSMFSLADKDGNGYISFREFLDILVVFMKGSSEEKSKLMFRMYDIDENGFLSKEEFLRMLRSFIEISNNCLSREQAEQVTESMFQASGFQDRHELTWEDFHYMLRDHDNELRLTQLCIKGVPEVFKQNVHNRVSFIKKEPRGTISDGEDPNQGMVAHCMDREGHELKKRPGRKANQYQLHLYTEAQRKKYQQNKVQQKIQEFKRFIENYRRHIVCVVLFSAITAGLFVERAYYYAFASPSTGIAQTTFVGIIISRGSAACISFLYSYILLTMCRNLITVLRETFLNCYIPFDAAVDFHRWIALAALIFSVLHTAGHIVNVYIFSVMPLSVLSCLFSSIFMNDGSQLPQKYYWWFFQTIPGMTGVLLLIILAVMYIFATHHFRRVSFQAFWITHHLYMLLYVLVIIHGSYALVQQPRFHIYFIIPALIYGADKLLSLSRKKVEISVVKAELLPSGVTHLRFQRPQDFDYKSGQWVRIACMALGTTEYHPFTLTSAPHEDTLSLHIRAVGPWTTRLRELYSPESLAVIGKLPKLYLDGPFGEGHQEWHKFEVSVLVGGGIGVTPFASILKDLVFKSSINSKLMCKKIYFIWVTRTQRQFEWLADIIREVEETDRNELVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNKSLFTGLRSITHFGRPPFVPFFDSLQEVHPEVHKIGVFSCGPPGMTKSVEKACQQLNKKDQAYFAHHYENF
SIO_010081: DUOX2
subclass of: SO_0000673
so part of: DUOX2
location: join(259479..259542,260148..260228,261118..261282,262040..262227,263197..263398,263864..264030,264103..264163,264264..264360,264491..264578,265264..265363,265628..265791,265989..266152,266322..266440,267119..267256,267359..267472,268293..268495,268607..268792,269162..269387,270021..270114,270342..270517,270695..270761,271073..271165,271942..272120,272910..273140,273308..273407,273534..273583,273665..273792,273969..274122,274684..274916,275252..275410,275573..275728,275809..275937,276186..276308)
location: region:259479-276308:1
so has part: feature:259479-259542:1:exon
so has part: feature:260148-260228:1:exon
so has part: feature:261118-261282:1:exon
so has part: feature:262040-262227:1:exon
so has part: feature:263197-263398:1:exon
so has part: feature:263864-264030:1:exon
so has part: feature:264103-264163:1:exon
so has part: feature:264264-264360:1:exon
so has part: feature:264491-264578:1:exon
so has part: feature:265264-265363:1:exon
so has part: feature:265628-265791:1:exon
so has part: feature:265989-266152:1:exon
so has part: feature:266322-266440:1:exon
so has part: feature:267119-267256:1:exon
so has part: feature:267359-267472:1:exon
so has part: feature:268293-268495:1:exon
so has part: feature:268607-268792:1:exon
so has part: feature:269162-269387:1:exon
so has part: feature:270021-270114:1:exon
so has part: feature:270342-270517:1:exon
so has part: feature:270695-270761:1:exon
so has part: feature:271073-271165:1:exon
so has part: feature:271942-272120:1:exon
so has part: feature:272910-273140:1:exon
so has part: feature:273308-273407:1:exon
so has part: feature:273534-273583:1:exon
so has part: feature:273665-273792:1:exon
so has part: feature:273969-274122:1:exon
so has part: feature:274684-274916:1:exon
so has part: feature:275252-275410:1:exon
so has part: feature:275573-275728:1:exon
so has part: feature:275809-275937:1:exon
so has part: feature:276186-276308:1:exon

XP_019474844.1
type: Protein
SIO_000068: ncbiprotein

position:259479:1
position: 259479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:276308:1
position: 276308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:259479-259542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260148-260228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261118-261282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262040-262227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263197-263398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263864-264030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264103-264163:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264264-264360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264491-264578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:265264-265363:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:265628-265791:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:265989-266152:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:266322-266440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:267119-267256:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267359-267472:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268293-268495:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:268607-268792:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:269162-269387:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:270021-270114:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:270342-270517:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:270695-270761:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:271073-271165:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:271942-272120:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:272910-273140:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:273308-273407:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:273534-273583:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:273665-273792:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:273969-274122:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:274684-274916:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:275252-275410:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:275573-275728:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:275809-275937:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:276186-276308:1:exon

DUOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DUOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual oxidase 2
translation: MQHTEMTSCLTMVLLMSWALGGAQNISWEVQRYDGWYNNLQHHSRGSVGSRLLRLLPANYADGVYQALQEPHVPNARQLSNAVARGPSGLPSQRNTTVLAVFFGFHVLSDILGTEKPGCPAEFLNIHIPEGDPVFDPAGTGDIVLPFQRIRWALETGQSPNSPREQTNEVTGWLDGSSIYGPSHSWSDALRNFSNGQLAAGPGGYVPRETDGKVPMWKALDPSTGQGGPHGIYDLGNAWGNENRFLQAISIAWFRYHNYLAAELANDHPSWSDEDIFQHARKRVIATFQSIVLYEWLPALLGTPVQTYTGYQQHLDPSLSPEFVAVARMFLATMVPPGVYKRDPSCHLRNTSSSSDPLPAVRLCNSYWSRESTEMQQEDVDDLLLGMSSQIAEQEDSIVVEDLQDYWYGPLKYSRTDYVASWLQRGRDLGLPTYNQARERFGLEPLQDWTNFAPHSQQKALEVAALYANNTARLELLPGGMLEGDSPLFSAIILDQFVRLRDGDRFWFENTRNGLFTEKEAEEIRNTTFRDVLAAVTYSQQAELQSNVFVWSEGDPCPQPQQLTAQLLANCTPMTVLDYFEGSGAGFGIIIIVLCCLPLVSLFVAWIIATLRKRDFKKLQKKKKASVRREVTGEAIHAMEWHGPKTDSSLVYIQLQADKVLKVLDGRGLVLRSVNLKAQQRVEVILSSNKGNKALLLKSPKEYDLVLLFSEEAERSSFLGKLQDFLKTSCLELHVSEMKEQSLLKRAVTQEQRKQILETFFRHLFAQMLDINKTDAGELNFESSQKAKESLTCELSRAEFAEALGLKANSMFVDSMFSLADKDGNGYISFREFLDILVVFMKGSSEEKSKLMFRMYDIDENGFLSKEEFLRMLRSFIEISNNCLSREQAEQVTESMFQASGFQDRHELTWEDFHYMLRDHDNELRLTQLCIKGVPEVFKQNVHNRVSFIKKEPRGTISDGEDPNQGMVAHCMDREGHELKKRPGRKANQYQLHLYTEAQRKKYQQNKVQQKIQEFKRFIENYRRHIVCVVLFSAITAGLFVERAYYYAFASPSTGIAQTTFVGIIISRGSAACISFLYSYILLTMCRNLITVLRETFLNCYIPFDAAVDFHRWIALAALIFSVLHTAGHIVNVYIFSVMPLSVLSCLFSSIFMNDGSQLPQKYYWWFFQTIPGMTGVLLLIILAVMYIFATHHFRRVSFQAFWITHHLYMLLYVLVIIHGSYALVQQPRFHIYFIIPALIYGADKLLSLSRKKVEISVVKAELLPSGVTHLRFQRPQDFDYKSGQWVRIACMALGTTEYHPFTLTSAPHEDTLSLHIRAVGPWTTRLRELYSPESLAVIGKLPKLYLDGPFGEGHQEWHKFEVSVLVGGGIGVTPFASILKDLVFKSSINSKLMCKKIYFIWVTRTQRQFEWLADIIREVEETDRNELVSVHIYITQLAEKFDLRTTMLYICERHFQKVLNKSLFTGLRSITHFGRPPFVPFFDSLQEVHPEVHKIGVFSCGPPGMTKSVEKACQQLNKKDQAYFAHHYENF
SIO_010081: DUOX2
subclass of: SO_0000673
so part of: DUOX2
location: join(259479..259542,260148..260228,261118..261282,262040..262227,263197..263398,263864..264030,264103..264163,264264..264360,264491..264578,265264..265363,265628..265791,265989..266152,266322..266440,267119..267256,267359..267472,268293..268495,268607..268792,269162..269387,270021..270114,270342..270517,270695..270761,271073..271165,271942..272120,272910..273140,273308..273407,273534..273583,273665..273792,273969..274122,274684..274916,275252..275410,275573..275728,275809..275937,276186..276308)
location: region:259479-276308:1
so has part: feature:259479-259542:1:exon
so has part: feature:260148-260228:1:exon
so has part: feature:261118-261282:1:exon
so has part: feature:262040-262227:1:exon
so has part: feature:263197-263398:1:exon
so has part: feature:263864-264030:1:exon
so has part: feature:264103-264163:1:exon
so has part: feature:264264-264360:1:exon
so has part: feature:264491-264578:1:exon
so has part: feature:265264-265363:1:exon
so has part: feature:265628-265791:1:exon
so has part: feature:265989-266152:1:exon
so has part: feature:266322-266440:1:exon
so has part: feature:267119-267256:1:exon
so has part: feature:267359-267472:1:exon
so has part: feature:268293-268495:1:exon
so has part: feature:268607-268792:1:exon
so has part: feature:269162-269387:1:exon
so has part: feature:270021-270114:1:exon
so has part: feature:270342-270517:1:exon
so has part: feature:270695-270761:1:exon
so has part: feature:271073-271165:1:exon
so has part: feature:271942-272120:1:exon
so has part: feature:272910-273140:1:exon
so has part: feature:273308-273407:1:exon
so has part: feature:273534-273583:1:exon
so has part: feature:273665-273792:1:exon
so has part: feature:273969-274122:1:exon
so has part: feature:274684-274916:1:exon
so has part: feature:275252-275410:1:exon
so has part: feature:275573-275728:1:exon
so has part: feature:275809-275937:1:exon
so has part: feature:276186-276308:1:exon

XP_010715457.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:259479-259542:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:260148-260228:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:261118-261282:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:262040-262227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:263197-263398:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:263864-264030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:264103-264163:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:264264-264360:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:264491-264578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:265264-265363:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:265628-265791:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:265989-266152:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:266322-266440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:267119-267256:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:267359-267472:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:268293-268495:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:268607-268792:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:269162-269387:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:270021-270114:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:270342-270517:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:270695-270761:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:271073-271165:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:271942-272120:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:272910-273140:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:273308-273407:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:273534-273583:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:273665-273792:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:273969-274122:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:274684-274916:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:275252-275410:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:275573-275728:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:275809-275937:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:276186-276308:1:exon

SORD
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SORD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(277301..292492)
location: region:277301-292492:-1
so has part: feature:277301-292492:-1:exon
subclass of: SO_0000010

100539102
type: Gene
SIO_000068: ncbigene

position:277301:-1
position: 277301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292492:-1
position: 292492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277301-292492:-1:exon

SORD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SORD
product: sorbitol dehydrogenase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019619257.2
SIO_010081: SORD
subclass of: SO_0000673
so part of: SORD
location: complement(join(277301..278259,278868..278989,279404..279579,285242..285307,285747..285865,287734..287893,289371..289535,290239..290348,292037..292077,292451..292492))
location: region:277301-292492:-1
so has part: feature:292451-292492:-1:exon
so has part: feature:292037-292077:-1:exon
so has part: feature:290239-290348:-1:exon
so has part: feature:289371-289535:-1:exon
so has part: feature:287734-287893:-1:exon
so has part: feature:285747-285865:-1:exon
so has part: feature:285242-285307:-1:exon
so has part: feature:279404-279579:-1:exon
so has part: feature:278868-278989:-1:exon
so has part: feature:277301-278259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292451-292492:-1:exon

position:292451:-1
position: 292451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:292037-292077:-1:exon

position:292037:-1
position: 292037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292077:-1
position: 292077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:290239-290348:-1:exon

position:290239:-1
position: 290239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290348:-1
position: 290348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289371-289535:-1:exon

position:289371:-1
position: 289371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289535:-1
position: 289535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:287734-287893:-1:exon

position:287734:-1
position: 287734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:287893:-1
position: 287893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:285747-285865:-1:exon

position:285747:-1
position: 285747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285865:-1
position: 285865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:285242-285307:-1:exon

position:285242:-1
position: 285242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285307:-1
position: 285307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:279404-279579:-1:exon

position:279404:-1
position: 279404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279579:-1
position: 279579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:278868-278989:-1:exon

position:278868:-1
position: 278868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278989:-1
position: 278989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:277301-278259:-1:exon

position:278259:-1
position: 278259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SORD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SORD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorbitol dehydrogenase
translation: MGPSWLGATQDSHQLEQPPIFCHFEVNCQEQGIHHISGQQAPESLLSFSVCPQEDRPIPEPGPNEVLLRMHSVGICGSDVHYWQHGRIGDFVVKDPMVLGHEASGTVIKVGAGVTHLKPGDRVAIEPGVPRETDDFCKTGRYNLSPTIFFCATPPDDGNLCRYYKHSASYCYKLPDNITFEEGALIEPLSVGIHACRRAGVTLGSKVFVSGSGPIGLVNVIIAKVMGAAAVIVTDLSASRLQTAKEVGADFTIQVKNETPQELAAKVESLLGCMPEITVECTGVQACIQASIYATRSGGTLVLVGLGPEMVTVPIVNAAVREVDIRGIFRYCNTWPVAISLLASKQINIKPLVTHRFPLEKALEAFEITKRGEGVKVMLKCDPTDQNP
SIO_010081: SORD
subclass of: SO_0000673
so part of: SORD
location: complement(join(278094..278259,278868..278989,279404..279579,285242..285307,285747..285865,287734..287893,289371..289535,290239..290348,292037..292077,292451..292492))
location: region:278094-292492:-1
so has part: feature:292451-292492:-1:exon
so has part: feature:292037-292077:-1:exon
so has part: feature:290239-290348:-1:exon
so has part: feature:289371-289535:-1:exon
so has part: feature:287734-287893:-1:exon
so has part: feature:285747-285865:-1:exon
so has part: feature:285242-285307:-1:exon
so has part: feature:279404-279579:-1:exon
so has part: feature:278868-278989:-1:exon
so has part: feature:278094-278259:-1:exon

XP_019474802.1
type: Protein
SIO_000068: ncbiprotein

position:278094:-1
position: 278094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292451-292492:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:292037-292077:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290239-290348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289371-289535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:287734-287893:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:285747-285865:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:285242-285307:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:279404-279579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:278868-278989:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:278094-278259:-1:exon

LOC109369559
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369559
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 292801..296071
location: region:292801-296071:1
so has part: feature:292801-296071:1:exon
subclass of: SO_0000011

109369559
type: Gene
SIO_000068: ncbigene

position:292801:1
position: 292801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:296071:1
position: 296071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292801-296071:1:exon

LOC109369559
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369559
product: uncharacterized LOC109369559
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XR_004161004.1
SIO_010081: LOC109369559
subclass of: SO_0000673
so part of: LOC109369559
location: join(292801..293278,295589..296071)
location: region:292801-296071:1
so has part: feature:292801-293278:1:exon
so has part: feature:295589-296071:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292801-293278:1:exon

position:293278:1
position: 293278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295589-296071:1:exon

position:295589:1
position: 295589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RBPMS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RBPMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(309270..329950)
location: region:309270-329950:-1
so has part: feature:309270-329950:-1:exon
subclass of: SO_0000010

100539257
type: Gene
SIO_000068: ncbigene

position:309270:-1
position: 309270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329950:-1
position: 329950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309270-329950:-1:exon

RBPMS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RBPMS2
product: RNA binding protein, mRNA processing factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 158 samples with support for all annotated introns
transcript id: XM_010717154.2
SIO_010081: RBPMS2
subclass of: SO_0000673
so part of: RBPMS2
location: complement(join(309270..310454,310678..310747,319585..319733,320148..320298,321051..321113,321635..321673,322340..322417,329786..329950))
location: region:309270-329950:-1
so has part: feature:329786-329950:-1:exon
so has part: feature:322340-322417:-1:exon
so has part: feature:321635-321673:-1:exon
so has part: feature:321051-321113:-1:exon
so has part: feature:320148-320298:-1:exon
so has part: feature:319585-319733:-1:exon
so has part: feature:310678-310747:-1:exon
so has part: feature:309270-310454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329786-329950:-1:exon

position:329786:-1
position: 329786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322340-322417:-1:exon

position:322340:-1
position: 322340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:322417:-1
position: 322417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:321635-321673:-1:exon

position:321635:-1
position: 321635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321673:-1
position: 321673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:321051-321113:-1:exon

position:321051:-1
position: 321051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:321113:-1
position: 321113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:320148-320298:-1:exon

position:320148:-1
position: 320148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:320298:-1
position: 320298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:319585-319733:-1:exon

position:319585:-1
position: 319585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319733:-1
position: 319733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:310678-310747:-1:exon

position:310678:-1
position: 310678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310747:-1
position: 310747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:309270-310454:-1:exon

position:310454:-1
position: 310454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBPMS2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: RBPMS2
product: RNA binding protein, mRNA processing factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 85 samples with support for all annotated introns
transcript id: XR_002118752.1
SIO_010081: RBPMS2
so part of: RBPMS2
location: complement(join(309270..310454,310678..310747,316905..317067,319585..319733,320148..320298,321051..321113,321635..321673,322340..322417,329786..329950))
location: region:309270-329950:-1
so has part: feature:329786-329950:-1:exon
so has part: feature:322340-322417:-1:exon
so has part: feature:321635-321673:-1:exon
so has part: feature:321051-321113:-1:exon
so has part: feature:320148-320298:-1:exon
so has part: feature:319585-319733:-1:exon
so has part: feature:316905-317067:-1:exon
so has part: feature:310678-310747:-1:exon
so has part: feature:309270-310454:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:329786-329950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322340-322417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321635-321673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321051-321113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320148-320298:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319585-319733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:316905-317067:-1:exon

position:316905:-1
position: 316905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317067:-1
position: 317067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:310678-310747:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:309270-310454:-1:exon

RBPMS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RBPMS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein with multiple splicing 2
translation: MSNLNKDTEHTNGGGNVEEEVRTLFVSGLPVDIKPRELYLLFRPFKGYEGSLIKLTSKQPVGFVTFDSRAGAEAAKNALNGIRFDPENPQTLRLEFAKANTKMAKSKLMATPNPTNIHPALGAHFIARDPYDLTGAALIPASPEAWAPYPLYTTELTPAIPHAAFTYPAAAAAAAALHAQMRWYPPSEATQQGWKSRQFC
SIO_010081: RBPMS2
subclass of: SO_0000673
so part of: RBPMS2
location: complement(join(310685..310747,319585..319733,320148..320298,321051..321113,321635..321673,322340..322417,329786..329845))
location: region:310685-329845:-1
so has part: feature:329786-329845:-1:exon
so has part: feature:322340-322417:-1:exon
so has part: feature:321635-321673:-1:exon
so has part: feature:321051-321113:-1:exon
so has part: feature:320148-320298:-1:exon
so has part: feature:319585-319733:-1:exon
so has part: feature:310685-310747:-1:exon

XP_010715456.1
type: Protein
SIO_000068: ncbiprotein

position:310685:-1
position: 310685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:329845:-1
position: 329845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:329786-329845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322340-322417:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:321635-321673:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:321051-321113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:320148-320298:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:319585-319733:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310685-310747:-1:exon

OAZ2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: OAZ2
note: ornithine decarboxylase antizyme 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: <351289..357875
location: region:351289-357875:1
so has part: feature:351289-357875:1:exon
subclass of: SO_0000010

100539411
type: Gene
SIO_000068: ncbigene

position:351289:1
position: 351289
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:357875:1
position: 357875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351289-357875:1:exon

OAZ2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: OAZ2
product: ornithine decarboxylase antizyme 2
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001291914.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript aligns at 91% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001291914.2
SIO_010081: OAZ2
subclass of: SO_0000673
so part of: OAZ2
location: join(<351289..351449,354799..354974,356491..356576,357582..357875)
location: region:351289-357875:1
so has part: feature:351289-351449:1:exon
so has part: feature:354799-354974:1:exon
so has part: feature:356491-356576:1:exon
so has part: feature:357582-357875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351289-351449:1:exon

position:351449:1
position: 351449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354799-354974:1:exon

position:354799:1
position: 354799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354974:1
position: 354974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:356491-356576:1:exon

position:356491:1
position: 356491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356576:1
position: 356576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:357582-357875:1:exon

position:357582:1
position: 357582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OAZ2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: OAZ2
inference: similar to AA sequence (same species):RefSeq:NP_001278843.1
exception: annotated by transcript or proteomic data
ribosomal slippage: true
note: protein translation is dependent on polyamine-induced +1 ribosomal frameshift; The RefSeq protein aligns at 97% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 2
product: ornithine decarboxylase antizyme 2
translation: MINTQDSNILPLSNCPQLQCCRHIVPGPLWCSDAPHPLSKIPGGRGGSRDPSLSALIYKDEKITVSQDVPVHEGKPHVVHFQYKVTEVKTSSWDAVLSNQSLFVEIPDGLLADGSKEGLSALLEFAEEKMKVSYVFICFRKSREDRAPLLKTFSFLGFEIVRPGHPSVPSRPDVMFMVYPLDQNSSSDEE
SIO_010081: OAZ2
subclass of: SO_0000673
so part of: OAZ2
location: join(<351289..351367,351369..351449,354799..354974,356491..356576,357582..357715)
location: region:351289-357715:1
so has part: feature:351289-351367:1:exon
so has part: feature:351369-351449:1:exon
so has part: feature:354799-354974:1:exon
so has part: feature:356491-356576:1:exon
so has part: feature:357582-357715:1:exon

NP_001278843.1
type: Protein
SIO_000068: ncbiprotein

position:357715:1
position: 357715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351289-351367:1:exon

position:351367:1
position: 351367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:351369-351449:1:exon

position:351369:1
position: 351369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:354799-354974:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:356491-356576:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357582-357715:1:exon

ZNF609
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ZNF609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(360635..390337)
location: region:360635-390337:-1
so has part: feature:360635-390337:-1:exon
subclass of: SO_0000010

100551474
type: Gene
SIO_000068: ncbigene

position:360635:-1
position: 360635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:390337:-1
position: 390337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360635-390337:-1:exon

ZNF609
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZNF609
product: zinc finger protein 609, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 195 samples with support for all annotated introns
transcript id: XM_010717152.3
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(360635..360983,361057..361126,361211..361427,361913..362088,362313..362679,362953..365305,365433..365520,370521..370746,387089..390337))
location: region:360635-390337:-1
so has part: feature:387089-390337:-1:exon
so has part: feature:370521-370746:-1:exon
so has part: feature:365433-365520:-1:exon
so has part: feature:362953-365305:-1:exon
so has part: feature:362313-362679:-1:exon
so has part: feature:361913-362088:-1:exon
so has part: feature:361211-361427:-1:exon
so has part: feature:361057-361126:-1:exon
so has part: feature:360635-360983:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387089-390337:-1:exon

position:387089:-1
position: 387089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370521-370746:-1:exon

position:370521:-1
position: 370521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370746:-1
position: 370746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365433-365520:-1:exon

position:365433:-1
position: 365433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365520:-1
position: 365520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:362953-365305:-1:exon

position:362953:-1
position: 362953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365305:-1
position: 365305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:362313-362679:-1:exon

position:362313:-1
position: 362313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362679:-1
position: 362679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:361913-362088:-1:exon

position:361913:-1
position: 361913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362088:-1
position: 362088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:361211-361427:-1:exon

position:361211:-1
position: 361211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361427:-1
position: 361427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:361057-361126:-1:exon

position:361057:-1
position: 361057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361126:-1
position: 361126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:360635-360983:-1:exon

position:360983:-1
position: 360983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF609
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZNF609
product: zinc finger protein 609, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010717153.3
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(360635..361126,361211..361427,361913..362088,362313..362679,362953..365305,365433..365520,370521..370746,387089..390337))
location: region:360635-390337:-1
so has part: feature:387089-390337:-1:exon
so has part: feature:370521-370746:-1:exon
so has part: feature:365433-365520:-1:exon
so has part: feature:362953-365305:-1:exon
so has part: feature:362313-362679:-1:exon
so has part: feature:361913-362088:-1:exon
so has part: feature:361211-361427:-1:exon
so has part: feature:360635-361126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:387089-390337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370521-370746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365433-365520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362953-365305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362313-362679:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361913-362088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:361211-361427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:360635-361126:-1:exon

ZNF609
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZNF609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 609 isoform X1
translation: MSLSSGASGGKGIDANPVETYDSGDEWDIGVGNLIIDLDADLEKDQQKLEMSGSKEVGLPAPNAVATLPDNIKFVSPVPGPQGKEGKSKSKRSKSGKDSGKPAPGSSLFTASEGAGGKKEAQGRSGDGANSGGLGPSVTPKGSEKSAKASRSVAGSKKDKEGGSSKSKKERSEGAGAPTEKEPGVLQPLALAVRVGQYDGGQGTEPAAATEQLGSIAIDTGAALNPLGVKSELEDGEGECRQLKKVKSEKMESPVSTPAVLPLHLLVPVVNNDISSPCEQIMVRTRSVGVNTCDVALATEPECLGPCEPGTSVNLEGIVWQETEDGMLVVNVTWRNKTYVGTLLDCTQHDWAPPRFCDSPTSDLEMRNGRGRGKRMRPNSNTPVNETAAASDSKGTSNSSKTRAGANSKGRRGSQNSSDHRTPPSGTAEDVKASPSSVTKRKSKPLSDMELNSSSEDSKGSKRIRTNSMGSAAVPPTTVKVEPTVLDRNCPSPILIDCPHPNCNKKYKHINGLKYHQAHAHTDDDSKLEADVDSEYGEEPSLHADVGSCNGAAVSQKGSLSPARSATPKVRLMEPHSPSPSSKFSAKVPSKKKLAGEGDTDPGALSNDGSEDGPSVADETSNDGFDTLEKRCVDKDKSKKASGAKQEKMPSKSLKSARPIAPAIPPQPIYTFQTATLTAASPGSSTGLTTTVVQTMPSSPQLKPIQPKPTVMGEPFAVNPALTPSKEKKKKDKKKKEPKEVENPLTPGKVCRAEDGKSPFRGETSDLGTKSEGLLNGSSDPHQSRLASIKAEADKIYSFTDNAPSPSIGGASRLENANPAQPMTPLHVVTQNGAEASSVKTNSPAYSDISDAGEDGEGKLESVKAKDPEQLVKDGAKKALFPPQPQSKESPYYQGFETYYSPGYPQASPGPLNPSSQAAAETQALKLKKDEEQENPEVKVKSEGVEEKKAELGSSSQQPSVIQQRPNMYMQSLYYNQYAYVPPYGYNEQGYHAHLLSTNPAYRQQYEEQQKQRQSLEQQQQRGLEKKAELGMKEREAALKEEWKQKPPMPPTLTKAPSLTDLVKSGLSKAKEQGGADMAKSVIIPKLEDSSKLSGSQVAEGLKVKLSEAGHLGKETAETKGGSECSRQAEVDPVLWYRQEAEPRMWTYVYPAKYSDIKTEDERWKEERDRKLKEERNRSKEVVSKEDGKESTSSECKLTPTEEARMVGKDPRPSVHVPVSSPLTQHQSYIPYMHGYSYSQSYDPNHPSYRAMPTVMMQNYPGSYLPSSYSFSPYGSKASGSEDSDKSRASPSVSCKSSSESKALDILQQHASHYKSKSPTISEKTAQERDRSGCGVVGGSGSCSSIGGAGGGERSTERPRTSPSQRLLSTHHHHHHLGYSLLPAQYNLPYATGLSSTAIVASQQGSAPSLYPPPRRT
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(360977..360983,361057..361126,361211..361427,361913..362088,362313..362679,362953..365305,365433..365520,370521..370746,387089..387838))
location: region:360977-387838:-1
so has part: feature:387089-387838:-1:exon
so has part: feature:370521-370746:-1:exon
so has part: feature:365433-365520:-1:exon
so has part: feature:362953-365305:-1:exon
so has part: feature:362313-362679:-1:exon
so has part: feature:361913-362088:-1:exon
so has part: feature:361211-361427:-1:exon
so has part: feature:361057-361126:-1:exon
so has part: feature:360977-360983:-1:exon

XP_010715454.1
type: Protein
SIO_000068: ncbiprotein

position:360977:-1
position: 360977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:387838:-1
position: 387838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387089-387838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370521-370746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365433-365520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362953-365305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362313-362679:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361913-362088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:361211-361427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:361057-361126:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:360977-360983:-1:exon

ZNF609
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZNF609
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 609 isoform X2
translation: MSLSSGASGGKGIDANPVETYDSGDEWDIGVGNLIIDLDADLEKDQQKLEMSGSKEVGLPAPNAVATLPDNIKFVSPVPGPQGKEGKSKSKRSKSGKDSGKPAPGSSLFTASEGAGGKKEAQGRSGDGANSGGLGPSVTPKGSEKSAKASRSVAGSKKDKEGGSSKSKKERSEGAGAPTEKEPGVLQPLALAVRVGQYDGGQGTEPAAATEQLGSIAIDTGAALNPLGVKSELEDGEGECRQLKKVKSEKMESPVSTPAVLPLHLLVPVVNNDISSPCEQIMVRTRSVGVNTCDVALATEPECLGPCEPGTSVNLEGIVWQETEDGMLVVNVTWRNKTYVGTLLDCTQHDWAPPRFCDSPTSDLEMRNGRGRGKRMRPNSNTPVNETAAASDSKGTSNSSKTRAGANSKGRRGSQNSSDHRTPPSGTAEDVKASPSSVTKRKSKPLSDMELNSSSEDSKGSKRIRTNSMGSAAVPPTTVKVEPTVLDRNCPSPILIDCPHPNCNKKYKHINGLKYHQAHAHTDDDSKLEADVDSEYGEEPSLHADVGSCNGAAVSQKGSLSPARSATPKVRLMEPHSPSPSSKFSAKVPSKKKLAGEGDTDPGALSNDGSEDGPSVADETSNDGFDTLEKRCVDKDKSKKASGAKQEKMPSKSLKSARPIAPAIPPQPIYTFQTATLTAASPGSSTGLTTTVVQTMPSSPQLKPIQPKPTVMGEPFAVNPALTPSKEKKKKDKKKKEPKEVENPLTPGKVCRAEDGKSPFRGETSDLGTKSEGLLNGSSDPHQSRLASIKAEADKIYSFTDNAPSPSIGGASRLENANPAQPMTPLHVVTQNGAEASSVKTNSPAYSDISDAGEDGEGKLESVKAKDPEQLVKDGAKKALFPPQPQSKESPYYQGFETYYSPGYPQASPGPLNPSSQAAAETQALKLKKDEEQENPEVKVKSEGVEEKKAELGSSSQQPSVIQQRPNMYMQSLYYNQYAYVPPYGYNEQGYHAHLLSTNPAYRQQYEEQQKQRQSLEQQQQRGLEKKAELGMKEREAALKEEWKQKPPMPPTLTKAPSLTDLVKSGLSKAKEQGGADMAKSVIIPKLEDSSKLSGSQVAEGLKVKLSEAGHLGKETAETKGGSECSRQAEVDPVLWYRQEAEPRMWTYVYPAKYSDIKTEDERWKEERDRKLKEERNRSKEVVSKEDGKESTSSECKLTPTEEARMVGKDPRPSVHVPVSSPLTQHQSYIPYMHGYSYSQSYDPNHPSYRAMPTVMMQNYPGSYLPSSYSFSPYGSKASGSEDSDKSRASPSVSCKSSSESKALDILQQHASHYKSKSPTISEKTAQERDRSGCGVVGGSGSCSSIGGAGGGERSTERPRTSPSQRLLSTHHHHHHLGYSLLPAQYNLPYATGLSSTAIVASQQGSAPSLYPPPRR
SIO_010081: ZNF609
subclass of: SO_0000673
so part of: ZNF609
location: complement(join(361053..361126,361211..361427,361913..362088,362313..362679,362953..365305,365433..365520,370521..370746,387089..387838))
location: region:361053-387838:-1
so has part: feature:387089-387838:-1:exon
so has part: feature:370521-370746:-1:exon
so has part: feature:365433-365520:-1:exon
so has part: feature:362953-365305:-1:exon
so has part: feature:362313-362679:-1:exon
so has part: feature:361913-362088:-1:exon
so has part: feature:361211-361427:-1:exon
so has part: feature:361053-361126:-1:exon

XP_010715455.1
type: Protein
SIO_000068: ncbiprotein

position:361053:-1
position: 361053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387089-387838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370521-370746:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365433-365520:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:362953-365305:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:362313-362679:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:361913-362088:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:361211-361427:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:361053-361126:-1:exon

TRIP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRIP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(396496..425346)
location: region:396496-425346:-1
so has part: feature:396496-425346:-1:exon
subclass of: SO_0000010

100539564
type: Gene
SIO_000068: ncbigene

position:396496:-1
position: 396496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425346:-1
position: 425346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:396496-425346:-1:exon

TRIP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRIP4
product: thyroid hormone receptor interactor 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_010717150.3
SIO_010081: TRIP4
subclass of: SO_0000673
so part of: TRIP4
location: complement(join(396496..396676,401177..401279,414381..414472,415286..415410,416303..416490,417218..417344,417830..418045,418230..418359,420152..420230,421095..421322,423754..423890,424117..424283,425161..425346))
location: region:396496-425346:-1
so has part: feature:425161-425346:-1:exon
so has part: feature:424117-424283:-1:exon
so has part: feature:423754-423890:-1:exon
so has part: feature:421095-421322:-1:exon
so has part: feature:420152-420230:-1:exon
so has part: feature:418230-418359:-1:exon
so has part: feature:417830-418045:-1:exon
so has part: feature:417218-417344:-1:exon
so has part: feature:416303-416490:-1:exon
so has part: feature:415286-415410:-1:exon
so has part: feature:414381-414472:-1:exon
so has part: feature:401177-401279:-1:exon
so has part: feature:396496-396676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425161-425346:-1:exon

position:425161:-1
position: 425161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424117-424283:-1:exon

position:424117:-1
position: 424117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:424283:-1
position: 424283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:423754-423890:-1:exon

position:423754:-1
position: 423754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423890:-1
position: 423890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:421095-421322:-1:exon

position:421095:-1
position: 421095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:421322:-1
position: 421322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:420152-420230:-1:exon

position:420152:-1
position: 420152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:420230:-1
position: 420230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:418230-418359:-1:exon

position:418230:-1
position: 418230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418359:-1
position: 418359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:417830-418045:-1:exon

position:417830:-1
position: 417830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:418045:-1
position: 418045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:417218-417344:-1:exon

position:417218:-1
position: 417218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:417344:-1
position: 417344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:416303-416490:-1:exon

position:416303:-1
position: 416303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:416490:-1
position: 416490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:415286-415410:-1:exon

position:415286:-1
position: 415286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:415410:-1
position: 415410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:414381-414472:-1:exon

position:414381:-1
position: 414381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:414472:-1
position: 414472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:401177-401279:-1:exon

position:401177:-1
position: 401177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:401279:-1
position: 401279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:396496-396676:-1:exon

position:396676:-1
position: 396676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRIP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating signal cointegrator 1 isoform X2
translation: MAAPGALLGWCVRRLRGDFGLDVGEEVVRYILSITNEDEIREYVVDLLQGTEGKKGRFVEELLSRWQQSSQSPAEPLPTYWKKDETSEAPRAGDQAKKGKRKGRNKQETPAYVEPSTHVEEVKTPLDLAKAQENSTASSSNACKRKTKYVSLYTKEGQDKLAVLIPGRHACECLGQKHKLINNCLVCGRIVCEQEGSGPCLFCGSLVCTKEEQDILQRDSNKSQKLLKKLMAGAESSGNLDAISKDLLPRQEARLKAGLEIAVRHKDKLLEFDRTSVRRTQVIDDESDYFATDSNQWLSKQEREALQKREQELQELRHASRLAKKITIDFAGRQILEEDSGMAEYHSKLDETIEAINCGTLNKPAANPEAKMTPSSGVLVNPHLLQPAPLWVDQTGLLPHRGVTHSMGAGEEFGSERNRLRIQDRELQEISDDGWCLSMHQPWASLLIRGIKRVEGRTWYTSHRGRLWIAATAKRPSPQEISELETTYTMLLQKDVEFPNDYPSGCLLGCVDVTDCLSQEQFNEQYPDLSQESGSPFVFICTNPQEMVVKFPIKGKPKIWKLDSKIHQGAKKGLMKQKAAA
SIO_010081: TRIP4
subclass of: SO_0000673
so part of: TRIP4
location: complement(join(396609..396676,401177..401279,414381..414472,415286..415410,416303..416490,417218..417344,417830..418045,418230..418359,420152..420230,421095..421322,423754..423890,424117..424283,425161..425246))
location: region:396609-425246:-1
so has part: feature:425161-425246:-1:exon
so has part: feature:424117-424283:-1:exon
so has part: feature:423754-423890:-1:exon
so has part: feature:421095-421322:-1:exon
so has part: feature:420152-420230:-1:exon
so has part: feature:418230-418359:-1:exon
so has part: feature:417830-418045:-1:exon
so has part: feature:417218-417344:-1:exon
so has part: feature:416303-416490:-1:exon
so has part: feature:415286-415410:-1:exon
so has part: feature:414381-414472:-1:exon
so has part: feature:401177-401279:-1:exon
so has part: feature:396609-396676:-1:exon

XP_010715452.1
type: Protein
SIO_000068: ncbiprotein

position:396609:-1
position: 396609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:425246:-1
position: 425246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425161-425246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424117-424283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423754-423890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421095-421322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420152-420230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418230-418359:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:417830-418045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417218-417344:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416303-416490:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:415286-415410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414381-414472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401177-401279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:396609-396676:-1:exon

TRIP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRIP4
product: thyroid hormone receptor interactor 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_019619309.2
SIO_010081: TRIP4
subclass of: SO_0000673
so part of: TRIP4
location: complement(join(400729..400994,401177..401279,414381..414472,415286..415410,416303..416490,417218..417344,417830..418045,418230..418359,420152..420230,421095..421322,423754..423890,424117..424283,425218..425346))
location: region:400729-425346:-1
so has part: feature:425218-425346:-1:exon
so has part: feature:424117-424283:-1:exon
so has part: feature:423754-423890:-1:exon
so has part: feature:421095-421322:-1:exon
so has part: feature:420152-420230:-1:exon
so has part: feature:418230-418359:-1:exon
so has part: feature:417830-418045:-1:exon
so has part: feature:417218-417344:-1:exon
so has part: feature:416303-416490:-1:exon
so has part: feature:415286-415410:-1:exon
so has part: feature:414381-414472:-1:exon
so has part: feature:401177-401279:-1:exon
so has part: feature:400729-400994:-1:exon

position:400729:-1
position: 400729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425218-425346:-1:exon

position:425218:-1
position: 425218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424117-424283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423754-423890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421095-421322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420152-420230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418230-418359:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:417830-418045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417218-417344:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416303-416490:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:415286-415410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414381-414472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401177-401279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400729-400994:-1:exon

position:400994:-1
position: 400994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRIP4
product: thyroid hormone receptor interactor 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_019619308.2
SIO_010081: TRIP4
subclass of: SO_0000673
so part of: TRIP4
location: complement(join(400729..400994,401177..401279,414381..414472,415286..415410,416303..416490,417218..417344,417830..418045,418230..418359,420152..420230,421095..421322,423754..423890,424117..424283,425161..425346))
location: region:400729-425346:-1
so has part: feature:425161-425346:-1:exon
so has part: feature:424117-424283:-1:exon
so has part: feature:423754-423890:-1:exon
so has part: feature:421095-421322:-1:exon
so has part: feature:420152-420230:-1:exon
so has part: feature:418230-418359:-1:exon
so has part: feature:417830-418045:-1:exon
so has part: feature:417218-417344:-1:exon
so has part: feature:416303-416490:-1:exon
so has part: feature:415286-415410:-1:exon
so has part: feature:414381-414472:-1:exon
so has part: feature:401177-401279:-1:exon
so has part: feature:400729-400994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:425161-425346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424117-424283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423754-423890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421095-421322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420152-420230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418230-418359:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:417830-418045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417218-417344:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416303-416490:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:415286-415410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414381-414472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401177-401279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400729-400994:-1:exon

TRIP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRIP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating signal cointegrator 1 isoform X3
translation: MAAPGALLGCYILSITNEDEIREYVVDLLQGTEGKKGRFVEELLSRWQQSSQSPAEPLPTYWKKDETSEAPRAGDQAKKGKRKGRNKQETPAYVEPSTHVEEVKTPLDLAKAQENSTASSSNACKRKTKYVSLYTKEGQDKLAVLIPGRHACECLGQKHKLINNCLVCGRIVCEQEGSGPCLFCGSLVCTKEEQDILQRDSNKSQKLLKKLMAGAESSGNLDAISKDLLPRQEARLKAGLEIAVRHKDKLLEFDRTSVRRTQVIDDESDYFATDSNQWLSKQEREALQKREQELQELRHASRLAKKITIDFAGRQILEEDSGMAEYHSKLDETIEAINCGTLNKPAANPEAKMTPSSGVLVNPHLLQPAPLWVDQTGLLPHRGVTHSMGAGEEFGSERNRLRIQDRELQEISDDGWCLSMHQPWASLLIRGIKRVEGRTWYTSHRGRLWIAATAKRPSPQEISELETTYTMLLQKDVEFPNDYPSGCLLGCVDVTDCLSQEQFNEQYPDLSQESGSPFVFICTNPQEMVVKFPIKGKPKIYVASFQIHASSCLCKHLGIMVLMCSEETHVCS
SIO_010081: TRIP4
subclass of: SO_0000673
so part of: TRIP4
location: complement(join(400897..400994,401177..401279,414381..414472,415286..415410,416303..416490,417218..417344,417830..418045,418230..418359,420152..420230,421095..421322,423754..423890,424117..424283,425218..425246))
location: region:400897-425246:-1
so has part: feature:425218-425246:-1:exon
so has part: feature:424117-424283:-1:exon
so has part: feature:423754-423890:-1:exon
so has part: feature:421095-421322:-1:exon
so has part: feature:420152-420230:-1:exon
so has part: feature:418230-418359:-1:exon
so has part: feature:417830-418045:-1:exon
so has part: feature:417218-417344:-1:exon
so has part: feature:416303-416490:-1:exon
so has part: feature:415286-415410:-1:exon
so has part: feature:414381-414472:-1:exon
so has part: feature:401177-401279:-1:exon
so has part: feature:400897-400994:-1:exon

XP_019474854.1
type: Protein
SIO_000068: ncbiprotein

position:400897:-1
position: 400897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:425218-425246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424117-424283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423754-423890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421095-421322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420152-420230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418230-418359:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:417830-418045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417218-417344:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416303-416490:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:415286-415410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414381-414472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401177-401279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400897-400994:-1:exon

TRIP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRIP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activating signal cointegrator 1 isoform X1
translation: MAAPGALLGWCVRRLRGDFGLDVGEEVVRYILSITNEDEIREYVVDLLQGTEGKKGRFVEELLSRWQQSSQSPAEPLPTYWKKDETSEAPRAGDQAKKGKRKGRNKQETPAYVEPSTHVEEVKTPLDLAKAQENSTASSSNACKRKTKYVSLYTKEGQDKLAVLIPGRHACECLGQKHKLINNCLVCGRIVCEQEGSGPCLFCGSLVCTKEEQDILQRDSNKSQKLLKKLMAGAESSGNLDAISKDLLPRQEARLKAGLEIAVRHKDKLLEFDRTSVRRTQVIDDESDYFATDSNQWLSKQEREALQKREQELQELRHASRLAKKITIDFAGRQILEEDSGMAEYHSKLDETIEAINCGTLNKPAANPEAKMTPSSGVLVNPHLLQPAPLWVDQTGLLPHRGVTHSMGAGEEFGSERNRLRIQDRELQEISDDGWCLSMHQPWASLLIRGIKRVEGRTWYTSHRGRLWIAATAKRPSPQEISELETTYTMLLQKDVEFPNDYPSGCLLGCVDVTDCLSQEQFNEQYPDLSQESGSPFVFICTNPQEMVVKFPIKGKPKIYVASFQIHASSCLCKHLGIMVLMCSEETHVCS
SIO_010081: TRIP4
subclass of: SO_0000673
so part of: TRIP4
location: complement(join(400897..400994,401177..401279,414381..414472,415286..415410,416303..416490,417218..417344,417830..418045,418230..418359,420152..420230,421095..421322,423754..423890,424117..424283,425161..425246))
location: region:400897-425246:-1
so has part: feature:425161-425246:-1:exon
so has part: feature:424117-424283:-1:exon
so has part: feature:423754-423890:-1:exon
so has part: feature:421095-421322:-1:exon
so has part: feature:420152-420230:-1:exon
so has part: feature:418230-418359:-1:exon
so has part: feature:417830-418045:-1:exon
so has part: feature:417218-417344:-1:exon
so has part: feature:416303-416490:-1:exon
so has part: feature:415286-415410:-1:exon
so has part: feature:414381-414472:-1:exon
so has part: feature:401177-401279:-1:exon
so has part: feature:400897-400994:-1:exon

XP_019474853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:425161-425246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424117-424283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423754-423890:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:421095-421322:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:420152-420230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:418230-418359:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:417830-418045:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:417218-417344:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:416303-416490:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:415286-415410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:414381-414472:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:401177-401279:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:400897-400994:-1:exon

CSNK1G1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 426504..511993
location: region:426504-511993:1
so has part: feature:426504-511993:1:exon
subclass of: SO_0000010

100541260
type: Gene
SIO_000068: ncbigene

position:426504:1
position: 426504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:511993:1
position: 511993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426504-511993:1:exon

CSNK1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CSNK1G1
product: casein kinase 1 gamma 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555189.1
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(426504..426726,444180..444287,465943..466357,470607..470647,474259..474328,479601..479651,480261..480323,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505034..505141,505417..505523,510478..511214)
location: region:426504-511214:1
so has part: feature:426504-426726:1:exon
so has part: feature:444180-444287:1:exon
so has part: feature:465943-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:479601-479651:1:exon
so has part: feature:480261-480323:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505034-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-511214:1:exon

position:511214:1
position: 511214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426504-426726:1:exon

position:426726:1
position: 426726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:444180-444287:1:exon

position:444180:1
position: 444180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444287:1
position: 444287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465943-466357:1:exon

position:465943:1
position: 465943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466357:1
position: 466357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:470607-470647:1:exon

position:470607:1
position: 470607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470647:1
position: 470647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:474259-474328:1:exon

position:474259:1
position: 474259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474328:1
position: 474328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:479601-479651:1:exon

position:479601:1
position: 479601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479651:1
position: 479651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:480261-480323:1:exon

position:480261:1
position: 480261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480323:1
position: 480323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:489958-490109:1:exon

position:489958:1
position: 489958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490109:1
position: 490109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:493184-493418:1:exon

position:493184:1
position: 493184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493418:1
position: 493418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:495150-495235:1:exon

position:495150:1
position: 495150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495235:1
position: 495235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:497315-497399:1:exon

position:497315:1
position: 497315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:497399:1
position: 497399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:499350-499498:1:exon

position:499350:1
position: 499350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499498:1
position: 499498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:500965-501069:1:exon

position:500965:1
position: 500965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501069:1
position: 501069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:505034-505141:1:exon

position:505034:1
position: 505034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505141:1
position: 505141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:505417-505523:1:exon

position:505417:1
position: 505417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505523:1
position: 505523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:510478-511214:1:exon

position:510478:1
position: 510478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSNK1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CSNK1G1
product: casein kinase 1 gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_010717143.3
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(426504..426726,444180..444287,465943..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505031..505141,505417..505523,510478..511214)
location: region:426504-511214:1
so has part: feature:426504-426726:1:exon
so has part: feature:444180-444287:1:exon
so has part: feature:465943-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505031-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-511214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426504-426726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444180-444287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465943-466357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505031-505141:1:exon

position:505031:1
position: 505031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:510478-511214:1:exon

CSNK1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CSNK1G1
product: casein kinase 1 gamma 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_010717148.3
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(426504..426726,444180..444287,465943..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505034..505141,505417..505523,510478..511214)
location: region:426504-511214:1
so has part: feature:426504-426726:1:exon
so has part: feature:444180-444287:1:exon
so has part: feature:465943-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505034-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-511214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426504-426726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444180-444287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465943-466357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505034-505141:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:510478-511214:1:exon

CSNK1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CSNK1G1
product: casein kinase 1 gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_010717146.3
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(426504..426726,444180..444268,465943..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505031..505141,505417..505523,510478..511214)
location: region:426504-511214:1
so has part: feature:426504-426726:1:exon
so has part: feature:444180-444268:1:exon
so has part: feature:465943-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505031-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-511214:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:426504-426726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444180-444268:1:exon

position:444268:1
position: 444268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:465943-466357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505031-505141:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:510478-511214:1:exon

CSNK1G1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: CSNK1G1
product: casein kinase 1 gamma 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004161003.1
SIO_010081: CSNK1G1
so part of: CSNK1G1
location: join(426504..426726,444180..444287,465943..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,501204..501577,505034..505123)
location: region:426504-505123:1
so has part: feature:426504-426726:1:exon
so has part: feature:444180-444287:1:exon
so has part: feature:465943-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:501204-501577:1:exon
so has part: feature:505034-505123:1:exon

position:505123:1
position: 505123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426504-426726:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:444180-444287:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465943-466357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:501204-501577:1:exon

position:501204:1
position: 501204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501577:1
position: 501577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:505034-505123:1:exon

CSNK1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CSNK1G1
product: casein kinase 1 gamma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_010717145.3
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(454554..454695,465943..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505031..505141,505417..505523,510478..511993)
location: region:454554-511993:1
so has part: feature:454554-454695:1:exon
so has part: feature:465943-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505031-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-511993:1:exon

position:454554:1
position: 454554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454554-454695:1:exon

position:454695:1
position: 454695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465943-466357:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505031-505141:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:510478-511993:1:exon

CSNK1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CSNK1G1
product: casein kinase 1 gamma 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010717147.3
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(461336..461610,465943..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505031..505141,505417..505523,510478..511993)
location: region:461336-511993:1
so has part: feature:461336-461610:1:exon
so has part: feature:465943-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505031-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-511993:1:exon

position:461336:1
position: 461336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:461336-461610:1:exon

position:461610:1
position: 461610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465943-466357:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505031-505141:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:510478-511993:1:exon

CSNK1G1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CSNK1G1
product: casein kinase 1 gamma 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019619312.2
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(464928..465048,465943..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505031..505141,505417..505523,510478..511993)
location: region:464928-511993:1
so has part: feature:464928-465048:1:exon
so has part: feature:465943-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505031-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-511993:1:exon

position:464928:1
position: 464928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464928-465048:1:exon

position:465048:1
position: 465048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:465943-466357:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505031-505141:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:510478-511993:1:exon

CSNK1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X3
translation: MDHPNREKDERQRTTKGMPGRSSHGSRPSSSASSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGVKQSVYLSGGRIKKNEGVLKKLAAEDRSEMPKQGVVTAEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKDHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFERPDYDYLRTIFTELFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGTSAITRDSHVHRDRPSQQALRNQVSSDRRGEWEIQPSRQTNTSYLTSHLAADRHGGSVQVVSSTNGELNVDDPTGAHSNAPITAQAEVEVVEEAKCCCFFKRKRKKTAQRHK
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(466180..466357,470607..470647,474259..474328,479601..479651,480261..480323,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505034..505141,505417..505523,510478..510532)
location: region:466180-510532:1
so has part: feature:466180-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:479601-479651:1:exon
so has part: feature:480261-480323:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505034-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-510532:1:exon

XP_031411049.1
type: Protein
SIO_000068: ncbiprotein

position:466180:1
position: 466180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510532:1
position: 510532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466180-466357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:479601-479651:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480261-480323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:505034-505141:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:510478-510532:1:exon

CSNK1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X1
translation: MDHPNREKDERQRTTKGMPGRSSHGSRPSSSASSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAAEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKDHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFERPDYDYLRTIFTELFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGTSAITRDSHVHRDRPSQQALRNQQVSSDRRGEWEIQPSRQTNTSYLTSHLAADRHGGSVQVVSSTNGELNVDDPTGAHSNAPITAQAEVEVVEEAKCCCFFKRKRKKTAQRHK
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(466180..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505031..505141,505417..505523,510478..510532)
location: region:466180-510532:1
so has part: feature:466180-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505031-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-510532:1:exon

XP_019474857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466180-466357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:505031-505141:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:510478-510532:1:exon

CSNK1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X1
translation: MDHPNREKDERQRTTKGMPGRSSHGSRPSSSASSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAAEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKDHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFERPDYDYLRTIFTELFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGTSAITRDSHVHRDRPSQQALRNQQVSSDRRGEWEIQPSRQTNTSYLTSHLAADRHGGSVQVVSSTNGELNVDDPTGAHSNAPITAQAEVEVVEEAKCCCFFKRKRKKTAQRHK
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(466180..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505031..505141,505417..505523,510478..510532)
location: region:466180-510532:1
so has part: feature:466180-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505031-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-510532:1:exon

XP_010715445.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466180-466357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:505031-505141:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:510478-510532:1:exon

CSNK1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X1
translation: MDHPNREKDERQRTTKGMPGRSSHGSRPSSSASSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAAEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKDHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFERPDYDYLRTIFTELFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGTSAITRDSHVHRDRPSQQALRNQQVSSDRRGEWEIQPSRQTNTSYLTSHLAADRHGGSVQVVSSTNGELNVDDPTGAHSNAPITAQAEVEVVEEAKCCCFFKRKRKKTAQRHK
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(466180..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505031..505141,505417..505523,510478..510532)
location: region:466180-510532:1
so has part: feature:466180-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505031-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-510532:1:exon

XP_010715447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466180-466357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:505031-505141:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:510478-510532:1:exon

CSNK1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X1
translation: MDHPNREKDERQRTTKGMPGRSSHGSRPSSSASSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAAEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKDHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFERPDYDYLRTIFTELFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGTSAITRDSHVHRDRPSQQALRNQQVSSDRRGEWEIQPSRQTNTSYLTSHLAADRHGGSVQVVSSTNGELNVDDPTGAHSNAPITAQAEVEVVEEAKCCCFFKRKRKKTAQRHK
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(466180..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505031..505141,505417..505523,510478..510532)
location: region:466180-510532:1
so has part: feature:466180-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505031-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-510532:1:exon

XP_010715448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466180-466357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:505031-505141:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:510478-510532:1:exon

CSNK1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X1
translation: MDHPNREKDERQRTTKGMPGRSSHGSRPSSSASSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAAEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKDHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFERPDYDYLRTIFTELFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGTSAITRDSHVHRDRPSQQALRNQQVSSDRRGEWEIQPSRQTNTSYLTSHLAADRHGGSVQVVSSTNGELNVDDPTGAHSNAPITAQAEVEVVEEAKCCCFFKRKRKKTAQRHK
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(466180..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505031..505141,505417..505523,510478..510532)
location: region:466180-510532:1
so has part: feature:466180-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505031-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-510532:1:exon

XP_010715449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466180-466357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:505031-505141:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:510478-510532:1:exon

CSNK1G1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CSNK1G1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase I isoform X2
translation: MDHPNREKDERQRTTKGMPGRSSHGSRPSSSASSGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAAEGLPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRQGNKKDHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRNTPVEVLCENFPEEMATYLRYVRRLDFFERPDYDYLRTIFTELFEKKGYTFDYAYDWVGRPIPTPVGSVHVDSGTSAITRDSHVHRDRPSQQALRNQVSSDRRGEWEIQPSRQTNTSYLTSHLAADRHGGSVQVVSSTNGELNVDDPTGAHSNAPITAQAEVEVVEEAKCCCFFKRKRKKTAQRHK
SIO_010081: CSNK1G1
subclass of: SO_0000673
so part of: CSNK1G1
location: join(466180..466357,470607..470647,474259..474328,489958..490109,493184..493418,495150..495235,497315..497399,499350..499498,500965..501069,505034..505141,505417..505523,510478..510532)
location: region:466180-510532:1
so has part: feature:466180-466357:1:exon
so has part: feature:470607-470647:1:exon
so has part: feature:474259-474328:1:exon
so has part: feature:489958-490109:1:exon
so has part: feature:493184-493418:1:exon
so has part: feature:495150-495235:1:exon
so has part: feature:497315-497399:1:exon
so has part: feature:499350-499498:1:exon
so has part: feature:500965-501069:1:exon
so has part: feature:505034-505141:1:exon
so has part: feature:505417-505523:1:exon
so has part: feature:510478-510532:1:exon

XP_010715450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:466180-466357:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470607-470647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:474259-474328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:489958-490109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:493184-493418:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495150-495235:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497315-497399:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:499350-499498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:500965-501069:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:505034-505141:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:505417-505523:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:510478-510532:1:exon

LOC116217076
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 482293..485762
location: region:482293-485762:1
so has part: feature:482293-485762:1:exon
subclass of: SO_0000011

116217076
type: Gene
SIO_000068: ncbigene

position:482293:1
position: 482293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485762:1
position: 485762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482293-485762:1:exon

LOC116217076
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217076
product: uncharacterized LOC116217076
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004161006.1
SIO_010081: LOC116217076
subclass of: SO_0000673
so part of: LOC116217076
location: join(482293..482539,482620..485762)
location: region:482293-485762:1
so has part: feature:482293-482539:1:exon
so has part: feature:482620-485762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:482293-482539:1:exon

position:482539:1
position: 482539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482620-485762:1:exon

position:482620:1
position: 482620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPIB
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PPIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <516354..517463
location: region:516354-517463:1
so has part: feature:516354-517463:1:exon
subclass of: SO_0000010

104912757
type: Gene
SIO_000068: ncbigene

position:516354:1
position: 516354
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:517463:1
position: 517463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516354-517463:1:exon

PPIB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PPIB
product: peptidylprolyl isomerase B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_031555197.1
SIO_010081: PPIB
subclass of: SO_0000673
so part of: PPIB
location: join(<516354..516500,516571..516662,516835..517021,517096..517463)
location: region:516354-517463:1
so has part: feature:516354-516500:1:exon
so has part: feature:516571-516662:1:exon
so has part: feature:516835-517021:1:exon
so has part: feature:517096-517463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516354-516500:1:exon

position:516500:1
position: 516500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:516571-516662:1:exon

position:516571:1
position: 516571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516662:1
position: 516662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:516835-517021:1:exon

position:516835:1
position: 516835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517021:1
position: 517021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:517096-517463:1:exon

position:517096:1
position: 517096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPIB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PPIB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peptidyl-prolyl cis-trans isomerase B
translation: PRLTAPTPPTKVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFGFKGSKFHRVIKDFMIQGGDFTRGDGNGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTPWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTIADCGTIEVEKPFAIAKE
SIO_010081: PPIB
subclass of: SO_0000673
so part of: PPIB
location: join(<516354..516500,516571..516662,516835..517021,517096..517218)
location: region:516354-517218:1
so has part: feature:516354-516500:1:exon
so has part: feature:516571-516662:1:exon
so has part: feature:516835-517021:1:exon
so has part: feature:517096-517218:1:exon

XP_031411057.1
type: Protein
SIO_000068: ncbiprotein

position:517218:1
position: 517218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516354-516500:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:516571-516662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:516835-517021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:517096-517218:1:exon

SNX22
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SNX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(517492..519376)
location: region:517492-519376:-1
so has part: feature:517492-519376:-1:exon
subclass of: SO_0000010

100550370
type: Gene
SIO_000068: ncbigene

position:517492:-1
position: 517492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519376:-1
position: 519376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517492-519376:-1:exon

SNX22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SNX22
product: sorting nexin 22, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_010717142.3
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(517492..517928,518025..518098,518182..518276,518348..518452,518556..518624,518942..519376))
location: region:517492-519376:-1
so has part: feature:518942-519376:-1:exon
so has part: feature:518556-518624:-1:exon
so has part: feature:518348-518452:-1:exon
so has part: feature:518182-518276:-1:exon
so has part: feature:518025-518098:-1:exon
so has part: feature:517492-517928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518942-519376:-1:exon

position:518942:-1
position: 518942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518556-518624:-1:exon

position:518556:-1
position: 518556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518624:-1
position: 518624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:518348-518452:-1:exon

position:518348:-1
position: 518348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518452:-1
position: 518452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:518182-518276:-1:exon

position:518182:-1
position: 518182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518276:-1
position: 518276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:518025-518098:-1:exon

position:518025:-1
position: 518025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518098:-1
position: 518098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:517492-517928:-1:exon

position:517928:-1
position: 517928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SNX22
product: sorting nexin 22, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_010717140.3
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(517492..517928,518025..518098,518182..518276,518348..518452,518556..518645,518942..519376))
location: region:517492-519376:-1
so has part: feature:518942-519376:-1:exon
so has part: feature:518556-518645:-1:exon
so has part: feature:518348-518452:-1:exon
so has part: feature:518182-518276:-1:exon
so has part: feature:518025-518098:-1:exon
so has part: feature:517492-517928:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:518942-519376:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518556-518645:-1:exon

position:518645:-1
position: 518645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:518348-518452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518182-518276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518025-518098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517492-517928:-1:exon

SNX22
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SNX22
product: sorting nexin 22, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XM_010717141.3
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(517492..517928,518025..518098,518182..518276,518348..518452,518556..518639,518942..519354))
location: region:517492-519354:-1
so has part: feature:518942-519354:-1:exon
so has part: feature:518556-518639:-1:exon
so has part: feature:518348-518452:-1:exon
so has part: feature:518182-518276:-1:exon
so has part: feature:518025-518098:-1:exon
so has part: feature:517492-517928:-1:exon

position:519354:-1
position: 519354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518942-519354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518556-518639:-1:exon

position:518639:-1
position: 518639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:518348-518452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518182-518276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518025-518098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517492-517928:-1:exon

SNX22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SNX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-22 isoform X3
translation: MIVVSIPAAEPEVTARSPEKAHTVLCNGRRHTVAKRYSEFQALHKRIKKSCKVPDFPPRRVPNWVPKVLEQRRQGLELYIQGVLCHNEELPQDVLDFLKVRRSQQEPKGCSPVVSRSPSQRPVLGFRTDPYTRPPAMDVLPNAVLSGVLQGLYTPWHCPPCTAVPRGQLGP
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(517825..517928,518025..518098,518182..518276,518348..518452,518556..518624,518942..519010))
location: region:517825-519010:-1
so has part: feature:518942-519010:-1:exon
so has part: feature:518556-518624:-1:exon
so has part: feature:518348-518452:-1:exon
so has part: feature:518182-518276:-1:exon
so has part: feature:518025-518098:-1:exon
so has part: feature:517825-517928:-1:exon

XP_010715444.1
type: Protein
SIO_000068: ncbiprotein

position:517825:-1
position: 517825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519010:-1
position: 519010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:518942-519010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518556-518624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518348-518452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518182-518276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518025-518098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517825-517928:-1:exon

SNX22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SNX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-22 isoform X2
translation: MIVVSIPAAEPEVTARSPEKAHTVFLVEVLCNGRRHTVAKRYSEFQALHKRIKKSCKVPDFPPRRVPNWVPKVLEQRRQGLELYIQGVLCHNEELPQDVLDFLKVRRSQQEPKGCSPVVSRSPSQRPVLGFRTDPYTRPPAMDVLPNAVLSGVLQGLYTPWHCPPCTAVPRGQLGP
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(517825..517928,518025..518098,518182..518276,518348..518452,518556..518639,518942..519010))
location: region:517825-519010:-1
so has part: feature:518942-519010:-1:exon
so has part: feature:518556-518639:-1:exon
so has part: feature:518348-518452:-1:exon
so has part: feature:518182-518276:-1:exon
so has part: feature:518025-518098:-1:exon
so has part: feature:517825-517928:-1:exon

XP_010715443.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518942-519010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518556-518639:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518348-518452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518182-518276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518025-518098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517825-517928:-1:exon

SNX22
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SNX22
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-22 isoform X1
translation: MIVVSIPAAEPEVTARSPEKAHTVQVFLVEVLCNGRRHTVAKRYSEFQALHKRIKKSCKVPDFPPRRVPNWVPKVLEQRRQGLELYIQGVLCHNEELPQDVLDFLKVRRSQQEPKGCSPVVSRSPSQRPVLGFRTDPYTRPPAMDVLPNAVLSGVLQGLYTPWHCPPCTAVPRGQLGP
SIO_010081: SNX22
subclass of: SO_0000673
so part of: SNX22
location: complement(join(517825..517928,518025..518098,518182..518276,518348..518452,518556..518645,518942..519010))
location: region:517825-519010:-1
so has part: feature:518942-519010:-1:exon
so has part: feature:518556-518645:-1:exon
so has part: feature:518348-518452:-1:exon
so has part: feature:518182-518276:-1:exon
so has part: feature:518025-518098:-1:exon
so has part: feature:517825-517928:-1:exon

XP_010715442.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:518942-519010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:518556-518645:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:518348-518452:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:518182-518276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:518025-518098:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:517825-517928:-1:exon

SNX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(519504..530311)
location: region:519504-530311:-1
so has part: feature:519504-530311:-1:exon
subclass of: SO_0000010

100540029
type: Gene
SIO_000068: ncbigene

position:519504:-1
position: 519504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530311:-1
position: 530311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:519504-530311:-1:exon

SNX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SNX1
product: sorting nexin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003209309.4
SIO_010081: SNX1
subclass of: SO_0000673
so part of: SNX1
location: complement(join(519504..519906,520162..520233,520492..520572,520684..520827,521873..522078,522591..522684,522823..522936,523495..523570,524294..524372,524896..525037,525938..525981,526761..526827,528039..528175,529056..529158,530143..530311))
location: region:519504-530311:-1
so has part: feature:530143-530311:-1:exon
so has part: feature:529056-529158:-1:exon
so has part: feature:528039-528175:-1:exon
so has part: feature:526761-526827:-1:exon
so has part: feature:525938-525981:-1:exon
so has part: feature:524896-525037:-1:exon
so has part: feature:524294-524372:-1:exon
so has part: feature:523495-523570:-1:exon
so has part: feature:522823-522936:-1:exon
so has part: feature:522591-522684:-1:exon
so has part: feature:521873-522078:-1:exon
so has part: feature:520684-520827:-1:exon
so has part: feature:520492-520572:-1:exon
so has part: feature:520162-520233:-1:exon
so has part: feature:519504-519906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:530143-530311:-1:exon

position:530143:-1
position: 530143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:529056-529158:-1:exon

position:529056:-1
position: 529056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529158:-1
position: 529158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:528039-528175:-1:exon

position:528039:-1
position: 528039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528175:-1
position: 528175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:526761-526827:-1:exon

position:526761:-1
position: 526761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526827:-1
position: 526827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:525938-525981:-1:exon

position:525938:-1
position: 525938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525981:-1
position: 525981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:524896-525037:-1:exon

position:524896:-1
position: 524896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525037:-1
position: 525037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:524294-524372:-1:exon

position:524294:-1
position: 524294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524372:-1
position: 524372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:523495-523570:-1:exon

position:523495:-1
position: 523495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523570:-1
position: 523570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:522823-522936:-1:exon

position:522823:-1
position: 522823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522936:-1
position: 522936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:522591-522684:-1:exon

position:522591:-1
position: 522591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522684:-1
position: 522684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:521873-522078:-1:exon

position:521873:-1
position: 521873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522078:-1
position: 522078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:520684-520827:-1:exon

position:520684:-1
position: 520684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520827:-1
position: 520827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:520492-520572:-1:exon

position:520492:-1
position: 520492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520572:-1
position: 520572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:520162-520233:-1:exon

position:520162:-1
position: 520162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520233:-1
position: 520233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:519504-519906:-1:exon

position:519906:-1
position: 519906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SNX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-1
translation: MASGGAGGSRSPSPGPHLPPPFPPSSADGDAADSDTEGEDIFAGTSKPSAPKRELLLPVNNSSKENGVRVEQDDQDLFADATVELSLDSTQNNQKKELAKASNPAPSLEVAASPSSRNPPKSNEELEEEEQEDKFELTVGVSDPEKVGDGMNAYVAYKVSTQTSMPMFRSKQFSVKRRFSDFLGLYEKLLEKHAHNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRVVSHPTMLQDPDVREFLEKEELPRAIGTQALSGAGILKMFNKATDAVSKMTIKMNELDIWFEEKLQEVECEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFILAELLGDYIRLLSVVRGAFDQRMKTWQRWQDAQTMLQKKREMEARLLWANKPDKLQQAKEEISEWESRVTQYERDFERISAVIRKEVIRFEKEKSKDFRNHVTKYLETLLNSQQQVVKYWEAFLPEAKAIS
SIO_010081: SNX1
subclass of: SO_0000673
so part of: SNX1
location: complement(join(519856..519906,520162..520233,520492..520572,520684..520827,521873..522078,522591..522684,522823..522936,523495..523570,524294..524372,524896..525037,525938..525981,526761..526827,528039..528175,529056..529158,530143..530277))
location: region:519856-530277:-1
so has part: feature:530143-530277:-1:exon
so has part: feature:529056-529158:-1:exon
so has part: feature:528039-528175:-1:exon
so has part: feature:526761-526827:-1:exon
so has part: feature:525938-525981:-1:exon
so has part: feature:524896-525037:-1:exon
so has part: feature:524294-524372:-1:exon
so has part: feature:523495-523570:-1:exon
so has part: feature:522823-522936:-1:exon
so has part: feature:522591-522684:-1:exon
so has part: feature:521873-522078:-1:exon
so has part: feature:520684-520827:-1:exon
so has part: feature:520492-520572:-1:exon
so has part: feature:520162-520233:-1:exon
so has part: feature:519856-519906:-1:exon

XP_003209357.1
type: Protein
SIO_000068: ncbiprotein

position:519856:-1
position: 519856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530277:-1
position: 530277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:530143-530277:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:529056-529158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528039-528175:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526761-526827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525938-525981:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:524896-525037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:524294-524372:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:523495-523570:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:522823-522936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:522591-522684:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:521873-522078:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:520684-520827:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:520492-520572:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:520162-520233:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:519856-519906:-1:exon

PATL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PATL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(531612..537427)
location: region:531612-537427:-1
so has part: feature:531612-537427:-1:exon
subclass of: SO_0000010

100539717
type: Gene
SIO_000068: ncbigene

position:531612:-1
position: 531612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537427:-1
position: 537427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:531612-537427:-1:exon

PATL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PATL2
product: PAT1 homolog 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019619305.2
SIO_010081: PATL2
subclass of: SO_0000673
so part of: PATL2
location: complement(join(531612..531893,532265..532414,532493..532590,532671..532811,533177..533336,533572..533705,533857..533901,534196..534293,534366..534486,534649..534787,534871..534954,535270..535424,535819..535902,536063..536230,536338..536403,536487..536555,536908..537074,537228..537427))
location: region:531612-537427:-1
so has part: feature:537228-537427:-1:exon
so has part: feature:536908-537074:-1:exon
so has part: feature:536487-536555:-1:exon
so has part: feature:536338-536403:-1:exon
so has part: feature:536063-536230:-1:exon
so has part: feature:535819-535902:-1:exon
so has part: feature:535270-535424:-1:exon
so has part: feature:534871-534954:-1:exon
so has part: feature:534649-534787:-1:exon
so has part: feature:534366-534486:-1:exon
so has part: feature:534196-534293:-1:exon
so has part: feature:533857-533901:-1:exon
so has part: feature:533572-533705:-1:exon
so has part: feature:533177-533336:-1:exon
so has part: feature:532671-532811:-1:exon
so has part: feature:532493-532590:-1:exon
so has part: feature:532265-532414:-1:exon
so has part: feature:531612-531893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537228-537427:-1:exon

position:537228:-1
position: 537228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:536908-537074:-1:exon

position:536908:-1
position: 536908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537074:-1
position: 537074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:536487-536555:-1:exon

position:536487:-1
position: 536487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536555:-1
position: 536555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:536338-536403:-1:exon

position:536338:-1
position: 536338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536403:-1
position: 536403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:536063-536230:-1:exon

position:536063:-1
position: 536063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536230:-1
position: 536230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:535819-535902:-1:exon

position:535819:-1
position: 535819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535902:-1
position: 535902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:535270-535424:-1:exon

position:535270:-1
position: 535270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:535424:-1
position: 535424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:534871-534954:-1:exon

position:534871:-1
position: 534871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534954:-1
position: 534954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:534649-534787:-1:exon

position:534649:-1
position: 534649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534787:-1
position: 534787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:534366-534486:-1:exon

position:534366:-1
position: 534366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534486:-1
position: 534486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:534196-534293:-1:exon

position:534196:-1
position: 534196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:534293:-1
position: 534293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:533857-533901:-1:exon

position:533857:-1
position: 533857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533901:-1
position: 533901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:533572-533705:-1:exon

position:533572:-1
position: 533572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533705:-1
position: 533705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:533177-533336:-1:exon

position:533177:-1
position: 533177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533336:-1
position: 533336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:532671-532811:-1:exon

position:532671:-1
position: 532671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532811:-1
position: 532811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:532493-532590:-1:exon

position:532493:-1
position: 532493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532590:-1
position: 532590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:532265-532414:-1:exon

position:532265:-1
position: 532265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:532414:-1
position: 532414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:531612-531893:-1:exon

position:531893:-1
position: 531893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PATL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PATL2
product: PAT1 homolog 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_019619304.2
SIO_010081: PATL2
subclass of: SO_0000673
so part of: PATL2
location: complement(join(531612..531893,532265..532414,532493..532590,532671..532811,533177..533336,533572..533705,533857..533901,534196..534293,534366..534486,534649..534787,534871..534954,535270..535424,536063..536230,536338..536403,536487..536555,536779..537074,537228..537427))
location: region:531612-537427:-1
so has part: feature:537228-537427:-1:exon
so has part: feature:536779-537074:-1:exon
so has part: feature:536487-536555:-1:exon
so has part: feature:536338-536403:-1:exon
so has part: feature:536063-536230:-1:exon
so has part: feature:535270-535424:-1:exon
so has part: feature:534871-534954:-1:exon
so has part: feature:534649-534787:-1:exon
so has part: feature:534366-534486:-1:exon
so has part: feature:534196-534293:-1:exon
so has part: feature:533857-533901:-1:exon
so has part: feature:533572-533705:-1:exon
so has part: feature:533177-533336:-1:exon
so has part: feature:532671-532811:-1:exon
so has part: feature:532493-532590:-1:exon
so has part: feature:532265-532414:-1:exon
so has part: feature:531612-531893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537228-537427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536779-537074:-1:exon

position:536779:-1
position: 536779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:536487-536555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536338-536403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536063-536230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535270-535424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534871-534954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534649-534787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534366-534486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534196-534293:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533857-533901:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:533572-533705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:533177-533336:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:532671-532811:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:532493-532590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:532265-532414:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:531612-531893:-1:exon

PATL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PATL2
product: PAT1 homolog 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_010717139.3
SIO_010081: PATL2
subclass of: SO_0000673
so part of: PATL2
location: complement(join(531612..531893,532265..532414,532493..532590,532671..532811,533177..533336,533572..533705,533857..533901,534196..534293,534366..534486,534649..534787,534871..534954,535270..535424,535819..535902,536063..536230,536338..536403,536487..536555,536779..537074,537228..537427))
location: region:531612-537427:-1
so has part: feature:537228-537427:-1:exon
so has part: feature:536779-537074:-1:exon
so has part: feature:536487-536555:-1:exon
so has part: feature:536338-536403:-1:exon
so has part: feature:536063-536230:-1:exon
so has part: feature:535819-535902:-1:exon
so has part: feature:535270-535424:-1:exon
so has part: feature:534871-534954:-1:exon
so has part: feature:534649-534787:-1:exon
so has part: feature:534366-534486:-1:exon
so has part: feature:534196-534293:-1:exon
so has part: feature:533857-533901:-1:exon
so has part: feature:533572-533705:-1:exon
so has part: feature:533177-533336:-1:exon
so has part: feature:532671-532811:-1:exon
so has part: feature:532493-532590:-1:exon
so has part: feature:532265-532414:-1:exon
so has part: feature:531612-531893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:537228-537427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536779-537074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536487-536555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536338-536403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536063-536230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535819-535902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:535270-535424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534871-534954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534649-534787:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534366-534486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534196-534293:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:533857-533901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:533572-533705:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:533177-533336:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:532671-532811:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:532493-532590:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:532265-532414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531612-531893:-1:exon

PATL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PATL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein PAT1 homolog 2 isoform X3
translation: MAEEDEELDLYNEMTFGLDPDSTEEDAAKIPVPPERSPELLEPEEQPQVVEGQPPTEEQGELQGEGGTEPEAEQSQDSAVLDSRIGSNWAEFGQEDMLAMDPMAWGSCPSSIPPHHMLEDKAILQVLERPPTATNMALDFLGSPVQRGYVGSPRHKRPDFRGMSPKSFPQHFLQQQPLIPCSTSSPRPFPPPRRASSFFASSQSAGYMSPGPFSPLSPNIGTPPRSLTMHFGPMSHSLDSSVFFSPSTSGQLNLSVPSHLTQLHPQHQRILTQRQQQGGTLQSVSPKKLWSPKADPCAGLMTCKEKDWVVKVEMIQLQSENLDDDYYYQTYYHRLERKQAEEELLGGRNKQEPPKLVTPFIQKVETYNSVVRIAGSLGQVAVSTCYSPRRAIDAVHHALVEEAAGSHRLRALHRIERLFLQLLEVEEMQRKMSLATEEQEHKTQEVGRIYQALNIRACSSEEEAEDEFLQVLCVRKGKKLTARLLPHLAPEQAEKILLTITHHLPFLMKKDAPDESLPLLYGPLNEVVGRMTFSRLIEVLQEMTRTLPESAELPLTMALKNQFGISLLYSLLSRGEGLLSSETPLEPHMGDFETWTDTVFLVARELSQVPKALLVEPLFLPSNLLSLFCRYLDKQTVHHLEAKMECSPLSAEAPMPC
SIO_010081: PATL2
subclass of: SO_0000673
so part of: PATL2
location: complement(join(531854..531893,532265..532414,532493..532590,532671..532811,533177..533336,533572..533705,533857..533901,534196..534293,534366..534486,534649..534787,534871..534954,535270..535424,535819..535902,536063..536230,536338..536403,536487..536555,536908..537074,537228..537282))
location: region:531854-537282:-1
so has part: feature:537228-537282:-1:exon
so has part: feature:536908-537074:-1:exon
so has part: feature:536487-536555:-1:exon
so has part: feature:536338-536403:-1:exon
so has part: feature:536063-536230:-1:exon
so has part: feature:535819-535902:-1:exon
so has part: feature:535270-535424:-1:exon
so has part: feature:534871-534954:-1:exon
so has part: feature:534649-534787:-1:exon
so has part: feature:534366-534486:-1:exon
so has part: feature:534196-534293:-1:exon
so has part: feature:533857-533901:-1:exon
so has part: feature:533572-533705:-1:exon
so has part: feature:533177-533336:-1:exon
so has part: feature:532671-532811:-1:exon
so has part: feature:532493-532590:-1:exon
so has part: feature:532265-532414:-1:exon
so has part: feature:531854-531893:-1:exon

XP_019474850.1
type: Protein
SIO_000068: ncbiprotein

position:531854:-1
position: 531854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537282:-1
position: 537282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537228-537282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536908-537074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536487-536555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536338-536403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536063-536230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535819-535902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:535270-535424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534871-534954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534649-534787:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534366-534486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534196-534293:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:533857-533901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:533572-533705:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:533177-533336:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:532671-532811:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:532493-532590:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:532265-532414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531854-531893:-1:exon

PATL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PATL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein PAT1 homolog 2 isoform X2
translation: MAEEDEELDLYNEMTFGLDPDSTEEDAAKIPVPPERSPELLEPEEQPQVVEGQPPTEEQGELQGEGGTEPEAEQVGSEEEEAEDEEQGVEEQEDEEEPNDLGDPAVMRAVQSKPTLESQDSAVLDSRIGSNWAEFGQEDMLAMDPMAWGSCPSSIPPHHMLEDKAILQVLERPPTATNMALDFLGSPVQRGYVGSPRHKRPDFRGMSPKSFPQHFLQQSAGYMSPGPFSPLSPNIGTPPRSLTMHFGPMSHSLDSSVFFSPSTSGQLNLSVPSHLTQLHPQHQRILTQRQQQGGTLQSVSPKKLWSPKADPCAGLMTCKEKDWVVKVEMIQLQSENLDDDYYYQTYYHRLERKQAEEELLGGRNKQEPPKLVTPFIQKVETYNSVVRIAGSLGQVAVSTCYSPRRAIDAVHHALVEEAAGSHRLRALHRIERLFLQLLEVEEMQRKMSLATEEQEHKTQEVGRIYQALNIRACSSEEEAEDEFLQVLCVRKGKKLTARLLPHLAPEQAEKILLTITHHLPFLMKKDAPDESLPLLYGPLNEVVGRMTFSRLIEVLQEMTRTLPESAELPLTMALKNQFGISLLYSLLSRGEGLLSSETPLEPHMGDFETWTDTVFLVARELSQVPKALLVEPLFLPSNLLSLFCRYLDKQTVHHLEAKMECSPLSAEAPMPC
SIO_010081: PATL2
subclass of: SO_0000673
so part of: PATL2
location: complement(join(531854..531893,532265..532414,532493..532590,532671..532811,533177..533336,533572..533705,533857..533901,534196..534293,534366..534486,534649..534787,534871..534954,535270..535424,536063..536230,536338..536403,536487..536555,536779..537074,537228..537282))
location: region:531854-537282:-1
so has part: feature:537228-537282:-1:exon
so has part: feature:536779-537074:-1:exon
so has part: feature:536487-536555:-1:exon
so has part: feature:536338-536403:-1:exon
so has part: feature:536063-536230:-1:exon
so has part: feature:535270-535424:-1:exon
so has part: feature:534871-534954:-1:exon
so has part: feature:534649-534787:-1:exon
so has part: feature:534366-534486:-1:exon
so has part: feature:534196-534293:-1:exon
so has part: feature:533857-533901:-1:exon
so has part: feature:533572-533705:-1:exon
so has part: feature:533177-533336:-1:exon
so has part: feature:532671-532811:-1:exon
so has part: feature:532493-532590:-1:exon
so has part: feature:532265-532414:-1:exon
so has part: feature:531854-531893:-1:exon

XP_019474849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537228-537282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536779-537074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536487-536555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536338-536403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536063-536230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535270-535424:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:534871-534954:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534649-534787:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534366-534486:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534196-534293:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533857-533901:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:533572-533705:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:533177-533336:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:532671-532811:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:532493-532590:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:532265-532414:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:531854-531893:-1:exon

PATL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PATL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein PAT1 homolog 2 isoform X1
translation: MAEEDEELDLYNEMTFGLDPDSTEEDAAKIPVPPERSPELLEPEEQPQVVEGQPPTEEQGELQGEGGTEPEAEQVGSEEEEAEDEEQGVEEQEDEEEPNDLGDPAVMRAVQSKPTLESQDSAVLDSRIGSNWAEFGQEDMLAMDPMAWGSCPSSIPPHHMLEDKAILQVLERPPTATNMALDFLGSPVQRGYVGSPRHKRPDFRGMSPKSFPQHFLQQQPLIPCSTSSPRPFPPPRRASSFFASSQSAGYMSPGPFSPLSPNIGTPPRSLTMHFGPMSHSLDSSVFFSPSTSGQLNLSVPSHLTQLHPQHQRILTQRQQQGGTLQSVSPKKLWSPKADPCAGLMTCKEKDWVVKVEMIQLQSENLDDDYYYQTYYHRLERKQAEEELLGGRNKQEPPKLVTPFIQKVETYNSVVRIAGSLGQVAVSTCYSPRRAIDAVHHALVEEAAGSHRLRALHRIERLFLQLLEVEEMQRKMSLATEEQEHKTQEVGRIYQALNIRACSSEEEAEDEFLQVLCVRKGKKLTARLLPHLAPEQAEKILLTITHHLPFLMKKDAPDESLPLLYGPLNEVVGRMTFSRLIEVLQEMTRTLPESAELPLTMALKNQFGISLLYSLLSRGEGLLSSETPLEPHMGDFETWTDTVFLVARELSQVPKALLVEPLFLPSNLLSLFCRYLDKQTVHHLEAKMECSPLSAEAPMPC
SIO_010081: PATL2
subclass of: SO_0000673
so part of: PATL2
location: complement(join(531854..531893,532265..532414,532493..532590,532671..532811,533177..533336,533572..533705,533857..533901,534196..534293,534366..534486,534649..534787,534871..534954,535270..535424,535819..535902,536063..536230,536338..536403,536487..536555,536779..537074,537228..537282))
location: region:531854-537282:-1
so has part: feature:537228-537282:-1:exon
so has part: feature:536779-537074:-1:exon
so has part: feature:536487-536555:-1:exon
so has part: feature:536338-536403:-1:exon
so has part: feature:536063-536230:-1:exon
so has part: feature:535819-535902:-1:exon
so has part: feature:535270-535424:-1:exon
so has part: feature:534871-534954:-1:exon
so has part: feature:534649-534787:-1:exon
so has part: feature:534366-534486:-1:exon
so has part: feature:534196-534293:-1:exon
so has part: feature:533857-533901:-1:exon
so has part: feature:533572-533705:-1:exon
so has part: feature:533177-533336:-1:exon
so has part: feature:532671-532811:-1:exon
so has part: feature:532493-532590:-1:exon
so has part: feature:532265-532414:-1:exon
so has part: feature:531854-531893:-1:exon

XP_010715441.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537228-537282:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536779-537074:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536487-536555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536338-536403:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536063-536230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:535819-535902:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:535270-535424:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:534871-534954:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:534649-534787:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:534366-534486:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:534196-534293:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:533857-533901:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:533572-533705:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:533177-533336:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:532671-532811:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:532493-532590:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:532265-532414:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:531854-531893:-1:exon

B2M
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: B2M
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <538281..540375
location: region:538281-540375:1
so has part: feature:538281-540375:1:exon
subclass of: SO_0000010

100539873
type: Gene
SIO_000068: ncbigene

position:538281:1
position: 538281
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:540375:1
position: 540375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538281-540375:1:exon

B2M
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: B2M
product: beta-2-microglobulin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 29 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010717227.2
SIO_010081: B2M
subclass of: SO_0000673
so part of: B2M
location: join(<538281..538581,538710..538744,539714..540375)
location: region:538281-540375:1
so has part: feature:538281-538581:1:exon
so has part: feature:538710-538744:1:exon
so has part: feature:539714-540375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:538281-538581:1:exon

position:538581:1
position: 538581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:538710-538744:1:exon

position:538710:1
position: 538710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:538744:1
position: 538744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:539714-540375:1:exon

position:539714:1
position: 539714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

B2M
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: B2M
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-2-microglobulin
translation: QHPHVPAVTPKVQVYSRFPASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWSFQRLVYADFTPSSDAVYTCKVDHETLKEPQVYKWDPEF
SIO_010081: B2M
subclass of: SO_0000673
so part of: B2M
location: join(<538281..538581,538710..538723)
location: region:538281-538723:1
so has part: feature:538281-538581:1:exon
so has part: feature:538710-538723:1:exon

XP_010715529.2
type: Protein
SIO_000068: ncbiprotein

position:538723:1
position: 538723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:538281-538581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:538710-538723:1:exon

TERB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TERB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 540507..544496
location: region:540507-544496:1
so has part: feature:540507-544496:1:exon
subclass of: SO_0000010

100540182
type: Gene
SIO_000068: ncbigene

position:540507:1
position: 540507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:544496:1
position: 544496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540507-544496:1:exon

TERB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TERB2
product: telomere repeat binding bouquet formation protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_003209310.4
SIO_010081: TERB2
subclass of: SO_0000673
so part of: TERB2
location: join(540507..540924,541256..541337,541933..542078,542246..542307,542655..542743,542835..542926,543372..544496)
location: region:540507-544496:1
so has part: feature:540507-540924:1:exon
so has part: feature:541256-541337:1:exon
so has part: feature:541933-542078:1:exon
so has part: feature:542246-542307:1:exon
so has part: feature:542655-542743:1:exon
so has part: feature:542835-542926:1:exon
so has part: feature:543372-544496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:540507-540924:1:exon

position:540924:1
position: 540924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541256-541337:1:exon

position:541256:1
position: 541256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541337:1
position: 541337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:541933-542078:1:exon

position:541933:1
position: 541933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542078:1
position: 542078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:542246-542307:1:exon

position:542246:1
position: 542246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542307:1
position: 542307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:542655-542743:1:exon

position:542655:1
position: 542655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542743:1
position: 542743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:542835-542926:1:exon

position:542835:1
position: 542835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542926:1
position: 542926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:543372-544496:1:exon

position:543372:1
position: 543372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TERB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TERB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomere repeats-binding bouquet formation protein 2
translation: MKIVLLEVDAVLACFVDCSVIFALSMLSNKTYANLCLSALLQTTLYSKMHHLLTSSSPQIKIPESRVWSEHSWQESCTPILGSPPFPPPPSSYPSAFPAAAPQLPAAMFKGCQAWFSHSVQPGPRQLWVAGGGLLTRWQDADYLFSSDAAHPDTRSIHESLEYLDGRATVFHPSYLSAWLNSSTAKQQPVALGHFVLPPICLQEEIRRKIGRFLWEQMDDSLVEQPEENLSDEPETVSKECEQGDGEDAQNLPESSEGKRGSRASSQEEAPCHALQEYPINNMVTGYTSAHDMRKYTGELHDFTPGTAGYIAYWVHHEISLCSDVKTKKILSNRQLFSTKP
SIO_010081: TERB2
subclass of: SO_0000673
so part of: TERB2
location: join(540540..540924,541256..541337,541933..542078,542246..542307,542655..542743,542835..542926,543372..543541)
location: region:540540-543541:1
so has part: feature:540540-540924:1:exon
so has part: feature:541256-541337:1:exon
so has part: feature:541933-542078:1:exon
so has part: feature:542246-542307:1:exon
so has part: feature:542655-542743:1:exon
so has part: feature:542835-542926:1:exon
so has part: feature:543372-543541:1:exon

XP_003209358.2
type: Protein
SIO_000068: ncbiprotein

position:540540:1
position: 540540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:543541:1
position: 543541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:540540-540924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541256-541337:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:541933-542078:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:542246-542307:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:542655-542743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:542835-542926:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:543372-543541:1:exon

RPS17
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RPS17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(544660..547391)
location: region:544660-547391:-1
so has part: feature:544660-547391:-1:exon
subclass of: SO_0000010

100540338
type: Gene
SIO_000068: ncbigene

position:544660:-1
position: 544660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547391:-1
position: 547391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544660-547391:-1:exon

RPS17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RPS17
product: ribosomal protein S17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 21 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003209311.2
SIO_010081: RPS17
subclass of: SO_0000673
so part of: RPS17
location: complement(join(544660..544782,544959..545024,546074..546179,546288..546460,547383..547391))
location: region:544660-547391:-1
so has part: feature:547383-547391:-1:exon
so has part: feature:546288-546460:-1:exon
so has part: feature:546074-546179:-1:exon
so has part: feature:544959-545024:-1:exon
so has part: feature:544660-544782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:547383-547391:-1:exon

position:547383:-1
position: 547383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:546288-546460:-1:exon

position:546288:-1
position: 546288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546460:-1
position: 546460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:546074-546179:-1:exon

position:546074:-1
position: 546074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546179:-1
position: 546179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:544959-545024:-1:exon

position:544959:-1
position: 544959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545024:-1
position: 545024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:544660-544782:-1:exon

position:544782:-1
position: 544782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RPS17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RPS17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S17
translation: MYERRCVSPQGRVRTKTVKKAARVIIEKYYTRLGNDFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTPRGAL
SIO_010081: RPS17
subclass of: SO_0000673
so part of: RPS17
location: complement(join(544702..544782,544959..545024,546074..546179,546288..546460,547383..547391))
location: region:544702-547391:-1
so has part: feature:547383-547391:-1:exon
so has part: feature:546288-546460:-1:exon
so has part: feature:546074-546179:-1:exon
so has part: feature:544959-545024:-1:exon
so has part: feature:544702-544782:-1:exon

XP_003209359.2
type: Protein
SIO_000068: ncbiprotein

position:544702:-1
position: 544702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547383-547391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:546288-546460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:546074-546179:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:544959-545024:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:544702-544782:-1:exon

LOC116217115
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217115
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(545565..545696)
location: region:545565-545696:-1
so has part: feature:545565-545696:-1:exon
subclass of: SO_0000578

116217115
type: Gene
SIO_000068: ncbigene

position:545565:-1
position: 545565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545696:-1
position: 545696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545565-545696:-1:exon

LOC116217115
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116217115
product: small nucleolar RNA SNORA71
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00056
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004161137.1
SIO_010081: LOC116217115
subclass of: SO_0000673
so part of: LOC116217115
location: complement(545565..545696)
location: region:545565-545696:-1
so has part: feature:545565-545696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:545565-545696:-1:exon

CPEB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CPEB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(547093..572159)
location: region:547093-572159:-1
so has part: feature:547093-572159:-1:exon
subclass of: SO_0000010

100540494
type: Gene
SIO_000068: ncbigene

position:547093:-1
position: 547093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572159:-1
position: 572159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:547093-572159:-1:exon

CPEB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPEB1
product: cytoplasmic polyadenylation element binding protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_010717134.2
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(547093..548450,548657..548737,548878..548972,550438..550636,551330..551466,552392..552481,552651..552764,552881..553130,553487..553713,565511..565699,571290..571467,572106..572159))
location: region:547093-572159:-1
so has part: feature:572106-572159:-1:exon
so has part: feature:571290-571467:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552392-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:547093-548450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572106-572159:-1:exon

position:572106:-1
position: 572106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:571290-571467:-1:exon

position:571290:-1
position: 571290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571467:-1
position: 571467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:565511-565699:-1:exon

position:565511:-1
position: 565511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565699:-1
position: 565699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:553487-553713:-1:exon

position:553487:-1
position: 553487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553713:-1
position: 553713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:552881-553130:-1:exon

position:552881:-1
position: 552881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:553130:-1
position: 553130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:552651-552764:-1:exon

position:552651:-1
position: 552651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552764:-1
position: 552764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:552392-552481:-1:exon

position:552392:-1
position: 552392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552481:-1
position: 552481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:551330-551466:-1:exon

position:551330:-1
position: 551330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551466:-1
position: 551466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:550438-550636:-1:exon

position:550438:-1
position: 550438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550636:-1
position: 550636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:548878-548972:-1:exon

position:548878:-1
position: 548878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548972:-1
position: 548972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:548657-548737:-1:exon

position:548657:-1
position: 548657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548737:-1
position: 548737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:547093-548450:-1:exon

position:548450:-1
position: 548450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CPEB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPEB1
product: cytoplasmic polyadenylation element binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010717133.2
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(547093..548450,548657..548737,548878..548972,550438..550636,551330..551466,552377..552481,552651..552764,552881..553130,553487..553713,565511..565699,571290..571467,572106..572159))
location: region:547093-572159:-1
so has part: feature:572106-572159:-1:exon
so has part: feature:571290-571467:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552377-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:547093-548450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:572106-572159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571290-571467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552377-552481:-1:exon

position:552377:-1
position: 552377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:547093-548450:-1:exon

CPEB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPEB1
product: cytoplasmic polyadenylation element binding protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010717135.3
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(547093..548450,548657..548737,548878..548972,550438..550636,551330..551466,552377..552481,552651..552764,552881..553130,553487..553713,565511..565699,571290..571467,571722..571770))
location: region:547093-571770:-1
so has part: feature:571722-571770:-1:exon
so has part: feature:571290-571467:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552377-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:547093-548450:-1:exon

position:571770:-1
position: 571770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571722-571770:-1:exon

position:571722:-1
position: 571722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:571290-571467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552377-552481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:547093-548450:-1:exon

CPEB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPEB1
product: cytoplasmic polyadenylation element binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_019619311.2
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(547093..548450,548657..548737,548878..548972,550438..550636,551330..551466,552392..552481,552651..552764,552881..553130,553487..553713,565511..565699,571290..571701))
location: region:547093-571701:-1
so has part: feature:571290-571701:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552392-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:547093-548450:-1:exon

position:571701:-1
position: 571701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571290-571701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552392-552481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:547093-548450:-1:exon

CPEB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPEB1
product: cytoplasmic polyadenylation element binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019619310.2
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(547093..548450,548657..548737,548878..548972,550438..550636,551330..551466,552377..552481,552651..552764,552881..553130,553487..553713,565511..565699,571290..571701))
location: region:547093-571701:-1
so has part: feature:571290-571701:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552377-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:547093-548450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:571290-571701:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552377-552481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:547093-548450:-1:exon

CPEB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPEB1
product: cytoplasmic polyadenylation element binding protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031555188.1
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(547093..548450,548657..548737,548878..548972,550438..550636,551330..551466,552377..552481,552651..552764,552881..553130,553487..553713,565511..565699,566013..568696))
location: region:547093-568696:-1
so has part: feature:566013-568696:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552377-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:547093-548450:-1:exon

position:568696:-1
position: 568696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:566013-568696:-1:exon

position:566013:-1
position: 566013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552377-552481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:547093-548450:-1:exon

CPEB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPEB1
product: cytoplasmic polyadenylation element binding protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010717136.3
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(547093..548450,548657..548737,548878..548972,550438..550636,551330..551466,552377..552481,552651..552764,552881..553130,553487..553713,565511..565699,565960..568696))
location: region:547093-568696:-1
so has part: feature:565960-568696:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552377-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:547093-548450:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565960-568696:-1:exon

position:565960:-1
position: 565960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552377-552481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:547093-548450:-1:exon

CPEB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPEB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 1 isoform X4
translation: MAFPPKEDRGRSIKDCWDSPDAPALSTCSNADIFRRINAMLDNSLDFSGVCTTPITKSKREVLPDFQDSDEAVASRMLFPTSTQESSRGLPDTNDLCLGLQSLNLTGWDRPWSTQDSDAAAQTSPQSVLSMLSSPLGNVLGKPPLGFLPLDPIGSDISEKFSAPALRNSRLDSRSLLDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLPLSGVSRDPLKMGVGSRMDQDQAALAAVTSPPASASKRWPGASAWPSWDLLDSPEDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPVYSCKVFLGGVPWDITEVGLINTFRAFGSLSVQWPGKDGKHPRCPPKGYVYLVFESEKSVRALLQACSQDLLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSKTVFVGALHGMLNAEALAAVMCDLFGGVIYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVTAAFVEIKTTKFTKKVQIDPYLEDSMCQVCSAQPGPFFCRDQICFKYFCRSCWHWQHSMEVLRHHRPLMRNQKNGDSS
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(548340..548450,548657..548737,548878..548972,550438..550636,551330..551466,552392..552481,552651..552764,552881..553130,553487..553713,565511..565699,571290..571467,572106..572120))
location: region:548340-572120:-1
so has part: feature:572106-572120:-1:exon
so has part: feature:571290-571467:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552392-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:548340-548450:-1:exon

XP_010715436.1
type: Protein
SIO_000068: ncbiprotein

position:548340:-1
position: 548340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572120:-1
position: 572120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572106-572120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571290-571467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552392-552481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:548340-548450:-1:exon

CPEB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPEB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 1 isoform X2
translation: MAFPPKEDRGRSIKDCWDSPDAPALSTCSNADIFRRINAMLDNSLDFSGVCTTPITKSKREVLPDFQDSDEAVASRMLFPTSTQESSRGLPDTNDLCLGLQSLNLTGWDRPWSTQDSDAAAQTSPQSVLSMLSSPLGNVLGKPPLGFLPLDPIGSDISEKFSAPALRNSRLDSRSLLDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLPLSGVSRDPLKMGVGSRMDQDQAALAAVTSPPASASKRWPGASAWPSWDLLDSPEDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPVYSCKVFLGGVPWDITEVGLINTFRAFGSLSVQWPGKDGKHPRCPPKGNMPKGYVYLVFESEKSVRALLQACSQDLLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSKTVFVGALHGMLNAEALAAVMCDLFGGVIYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVTAAFVEIKTTKFTKKVQIDPYLEDSMCQVCSAQPGPFFCRDQICFKYFCRSCWHWQHSMEVLRHHRPLMRNQKNGDSS
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(548340..548450,548657..548737,548878..548972,550438..550636,551330..551466,552377..552481,552651..552764,552881..553130,553487..553713,565511..565699,571290..571467,572106..572120))
location: region:548340-572120:-1
so has part: feature:572106-572120:-1:exon
so has part: feature:571290-571467:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552377-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:548340-548450:-1:exon

XP_010715435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:572106-572120:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:571290-571467:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:552377-552481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:548340-548450:-1:exon

CPEB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPEB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 1 isoform X3
translation: MLLLSFQKEDRGRSIKDCWDSPDAPALSTCSNADIFRRINAMLDNSLDFSGVCTTPITKSKREVLPDFQDSDEAVASRMLFPTSTQESSRGLPDTNDLCLGLQSLNLTGWDRPWSTQDSDAAAQTSPQSVLSMLSSPLGNVLGKPPLGFLPLDPIGSDISEKFSAPALRNSRLDSRSLLDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLPLSGVSRDPLKMGVGSRMDQDQAALAAVTSPPASASKRWPGASAWPSWDLLDSPEDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPVYSCKVFLGGVPWDITEVGLINTFRAFGSLSVQWPGKDGKHPRCPPKGYVYLVFESEKSVRALLQACSQDLLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSKTVFVGALHGMLNAEALAAVMCDLFGGVIYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVTAAFVEIKTTKFTKKVQIDPYLEDSMCQVCSAQPGPFFCRDQICFKYFCRSCWHWQHSMEVLRHHRPLMRNQKNGDSS
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(548340..548450,548657..548737,548878..548972,550438..550636,551330..551466,552392..552481,552651..552764,552881..553130,553487..553713,565511..565699,571290..571488))
location: region:548340-571488:-1
so has part: feature:571290-571488:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552392-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:548340-548450:-1:exon

XP_019474856.1
type: Protein
SIO_000068: ncbiprotein

position:571488:-1
position: 571488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571290-571488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552392-552481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:548340-548450:-1:exon

CPEB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPEB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 1 isoform X1
translation: MLLLSFQKEDRGRSIKDCWDSPDAPALSTCSNADIFRRINAMLDNSLDFSGVCTTPITKSKREVLPDFQDSDEAVASRMLFPTSTQESSRGLPDTNDLCLGLQSLNLTGWDRPWSTQDSDAAAQTSPQSVLSMLSSPLGNVLGKPPLGFLPLDPIGSDISEKFSAPALRNSRLDSRSLLDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLPLSGVSRDPLKMGVGSRMDQDQAALAAVTSPPASASKRWPGASAWPSWDLLDSPEDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPVYSCKVFLGGVPWDITEVGLINTFRAFGSLSVQWPGKDGKHPRCPPKGNMPKGYVYLVFESEKSVRALLQACSQDLLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSKTVFVGALHGMLNAEALAAVMCDLFGGVIYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVTAAFVEIKTTKFTKKVQIDPYLEDSMCQVCSAQPGPFFCRDQICFKYFCRSCWHWQHSMEVLRHHRPLMRNQKNGDSS
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(548340..548450,548657..548737,548878..548972,550438..550636,551330..551466,552377..552481,552651..552764,552881..553130,553487..553713,565511..565699,571290..571488))
location: region:548340-571488:-1
so has part: feature:571290-571488:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552377-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:548340-548450:-1:exon

XP_019474855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:571290-571488:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552377-552481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:548340-548450:-1:exon

CPEB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPEB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 1 isoform X6
translation: MLDNSLDFSGVCTTPITKSKREVLPDFQDSDEAVASRMLFPTSTQESSRGLPDTNDLCLGLQSLNLTGWDRPWSTQDSDAAAQTSPQSVLSMLSSPLGNVLGKPPLGFLPLDPIGSDISEKFSAPALRNSRLDSRSLLDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLPLSGVSRDPLKMGVGSRMDQDQAALAAVTSPPASASKRWPGASAWPSWDLLDSPEDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPVYSCKVFLGGVPWDITEVGLINTFRAFGSLSVQWPGKDGKHPRCPPKGNMPKGYVYLVFESEKSVRALLQACSQDLLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSKTVFVGALHGMLNAEALAAVMCDLFGGVIYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVTAAFVEIKTTKFTKKVQIDPYLEDSMCQVCSAQPGPFFCRDQICFKYFCRSCWHWQHSMEVLRHHRPLMRNQKNGDSS
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(548340..548450,548657..548737,548878..548972,550438..550636,551330..551466,552377..552481,552651..552764,552881..553130,553487..553713,565511..565699,571290..571365))
location: region:548340-571365:-1
so has part: feature:571290-571365:-1:exon
so has part: feature:565511-565699:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552377-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:548340-548450:-1:exon

XP_010715437.1
type: Protein
SIO_000068: ncbiprotein

position:571365:-1
position: 571365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571290-571365:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:565511-565699:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:552377-552481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:548340-548450:-1:exon

CPEB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPEB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 1 isoform X5
translation: MLFPTSTQESSRGLPDTNDLCLGLQSLNLTGWDRPWSTQDSDAAAQTSPQSVLSMLSSPLGNVLGKPPLGFLPLDPIGSDISEKFSAPALRNSRLDSRSLLDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLPLSGVSRDPLKMGVGSRMDQDQAALAAVTSPPASASKRWPGASAWPSWDLLDSPEDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPVYSCKVFLGGVPWDITEVGLINTFRAFGSLSVQWPGKDGKHPRCPPKGNMPKGYVYLVFESEKSVRALLQACSQDLLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSKTVFVGALHGMLNAEALAAVMCDLFGGVIYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVTAAFVEIKTTKFTKKVQIDPYLEDSMCQVCSAQPGPFFCRDQICFKYFCRSCWHWQHSMEVLRHHRPLMRNQKNGDSS
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(548340..548450,548657..548737,548878..548972,550438..550636,551330..551466,552377..552481,552651..552764,552881..553130,553487..553713,565511..565664))
location: region:548340-565664:-1
so has part: feature:565511-565664:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552377-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:548340-548450:-1:exon

XP_031411048.1
type: Protein
SIO_000068: ncbiprotein

position:565664:-1
position: 565664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565511-565664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552377-552481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548340-548450:-1:exon

CPEB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPEB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytoplasmic polyadenylation element-binding protein 1 isoform X5
translation: MLFPTSTQESSRGLPDTNDLCLGLQSLNLTGWDRPWSTQDSDAAAQTSPQSVLSMLSSPLGNVLGKPPLGFLPLDPIGSDISEKFSAPALRNSRLDSRSLLDSRSSSPSDSDTSGFSSGSDHLSDLISSLRISPPLPFLPLSGVSRDPLKMGVGSRMDQDQAALAAVTSPPASASKRWPGASAWPSWDLLDSPEDPFSIEREARLHRQAAAVNEATCTWSGQLPPRNYKNPVYSCKVFLGGVPWDITEVGLINTFRAFGSLSVQWPGKDGKHPRCPPKGNMPKGYVYLVFESEKSVRALLQACSQDLLSPDGLSEYYFKMSSRRMRCKEVQVIPWVLADSNFVRSPSQRLDPSKTVFVGALHGMLNAEALAAVMCDLFGGVIYAGIDTDKHKYPIGSGRVTFNNQRSYLKAVTAAFVEIKTTKFTKKVQIDPYLEDSMCQVCSAQPGPFFCRDQICFKYFCRSCWHWQHSMEVLRHHRPLMRNQKNGDSS
SIO_010081: CPEB1
subclass of: SO_0000673
so part of: CPEB1
location: complement(join(548340..548450,548657..548737,548878..548972,550438..550636,551330..551466,552377..552481,552651..552764,552881..553130,553487..553713,565511..565664))
location: region:548340-565664:-1
so has part: feature:565511-565664:-1:exon
so has part: feature:553487-553713:-1:exon
so has part: feature:552881-553130:-1:exon
so has part: feature:552651-552764:-1:exon
so has part: feature:552377-552481:-1:exon
so has part: feature:551330-551466:-1:exon
so has part: feature:550438-550636:-1:exon
so has part: feature:548878-548972:-1:exon
so has part: feature:548657-548737:-1:exon
so has part: feature:548340-548450:-1:exon

XP_010715438.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:565511-565664:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:553487-553713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:552881-553130:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:552651-552764:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:552377-552481:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:551330-551466:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:550438-550636:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:548878-548972:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:548657-548737:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:548340-548450:-1:exon

AP3B2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: AP3B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(572782..583093)
location: region:572782-583093:-1
so has part: feature:572782-583093:-1:exon
subclass of: SO_0000010

100540649
type: Gene
SIO_000068: ncbigene

position:572782:-1
position: 572782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583093:-1
position: 583093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572782-583093:-1:exon

AP3B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: AP3B2
product: adaptor related protein complex 3 subunit beta 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555187.1
SIO_010081: AP3B2
subclass of: SO_0000673
so part of: AP3B2
location: complement(join(572782..573150,573444..573582,574311..574408,575011..575095,575186..575417,575513..575619,576329..576383,576457..576631,576712..576925,577152..577263,577414..577532,577610..577796,577876..578052,578130..578239,578321..578453,578675..578737,578903..578974,579125..579179,579341..579438,579683..579859,579976..580158,580456..580522,580704..580864,580953..581048,581123..581197,581302..581377,581962..583093))
location: region:572782-583093:-1
so has part: feature:581962-583093:-1:exon
so has part: feature:581302-581377:-1:exon
so has part: feature:581123-581197:-1:exon
so has part: feature:580953-581048:-1:exon
so has part: feature:580704-580864:-1:exon
so has part: feature:580456-580522:-1:exon
so has part: feature:579976-580158:-1:exon
so has part: feature:579683-579859:-1:exon
so has part: feature:579341-579438:-1:exon
so has part: feature:579125-579179:-1:exon
so has part: feature:578903-578974:-1:exon
so has part: feature:578675-578737:-1:exon
so has part: feature:578321-578453:-1:exon
so has part: feature:578130-578239:-1:exon
so has part: feature:577876-578052:-1:exon
so has part: feature:577610-577796:-1:exon
so has part: feature:577414-577532:-1:exon
so has part: feature:577152-577263:-1:exon
so has part: feature:576712-576925:-1:exon
so has part: feature:576457-576631:-1:exon
so has part: feature:576329-576383:-1:exon
so has part: feature:575513-575619:-1:exon
so has part: feature:575186-575417:-1:exon
so has part: feature:575011-575095:-1:exon
so has part: feature:574311-574408:-1:exon
so has part: feature:573444-573582:-1:exon
so has part: feature:572782-573150:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:581962-583093:-1:exon

position:581962:-1
position: 581962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:581302-581377:-1:exon

position:581302:-1
position: 581302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581377:-1
position: 581377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581123-581197:-1:exon

position:581123:-1
position: 581123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581197:-1
position: 581197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:580953-581048:-1:exon

position:580953:-1
position: 580953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581048:-1
position: 581048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:580704-580864:-1:exon

position:580704:-1
position: 580704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580864:-1
position: 580864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:580456-580522:-1:exon

position:580456:-1
position: 580456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580522:-1
position: 580522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:579976-580158:-1:exon

position:579976:-1
position: 579976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580158:-1
position: 580158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:579683-579859:-1:exon

position:579683:-1
position: 579683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579859:-1
position: 579859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:579341-579438:-1:exon

position:579341:-1
position: 579341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579438:-1
position: 579438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:579125-579179:-1:exon

position:579125:-1
position: 579125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579179:-1
position: 579179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:578903-578974:-1:exon

position:578903:-1
position: 578903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578974:-1
position: 578974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:578675-578737:-1:exon

position:578675:-1
position: 578675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578737:-1
position: 578737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:578321-578453:-1:exon

position:578321:-1
position: 578321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578453:-1
position: 578453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:578130-578239:-1:exon

position:578130:-1
position: 578130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578239:-1
position: 578239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:577876-578052:-1:exon

position:577876:-1
position: 577876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578052:-1
position: 578052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:577610-577796:-1:exon

position:577610:-1
position: 577610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577796:-1
position: 577796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:577414-577532:-1:exon

position:577414:-1
position: 577414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577532:-1
position: 577532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:577152-577263:-1:exon

position:577152:-1
position: 577152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577263:-1
position: 577263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:576712-576925:-1:exon

position:576712:-1
position: 576712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576925:-1
position: 576925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:576457-576631:-1:exon

position:576457:-1
position: 576457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576631:-1
position: 576631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:576329-576383:-1:exon

position:576329:-1
position: 576329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576383:-1
position: 576383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:575513-575619:-1:exon

position:575513:-1
position: 575513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575619:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:575186-575417:-1:exon

position:575186:-1
position: 575186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575417:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:575011-575095:-1:exon

position:575011:-1
position: 575011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575095:-1
position: 575095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:574311-574408:-1:exon

position:574311:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574408:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:573444-573582:-1:exon

position:573444:-1
position: 573444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573582:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:572782-573150:-1:exon

position:573150:-1
position: 573150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AP3B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: AP3B2
product: adaptor related protein complex 3 subunit beta 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_019619303.2
SIO_010081: AP3B2
subclass of: SO_0000673
so part of: AP3B2
location: complement(join(572782..573150,573444..573582,574188..574211,574311..574408,575011..575095,575186..575417,575513..575619,576329..576383,576457..576631,576712..576925,577152..577263,577414..577532,577610..577796,577876..578052,578130..578239,578321..578453,578675..578737,578903..578974,579125..579179,579341..579438,579976..580158,580456..580522,580704..580864,580953..581048,581123..581197,581302..581935))
location: region:572782-581935:-1
so has part: feature:581302-581935:-1:exon
so has part: feature:581123-581197:-1:exon
so has part: feature:580953-581048:-1:exon
so has part: feature:580704-580864:-1:exon
so has part: feature:580456-580522:-1:exon
so has part: feature:579976-580158:-1:exon
so has part: feature:579341-579438:-1:exon
so has part: feature:579125-579179:-1:exon
so has part: feature:578903-578974:-1:exon
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so has part: feature:578130-578239:-1:exon
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so has part: feature:577414-577532:-1:exon
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so has part: feature:576457-576631:-1:exon
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so has part: feature:574188-574211:-1:exon
so has part: feature:573444-573582:-1:exon
so has part: feature:572782-573150:-1:exon

position:581935:-1
position: 581935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581302-581935:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581123-581197:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:579976-580158:-1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:579125-579179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:578903-578974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:578675-578737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:578321-578453:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:578130-578239:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:577876-578052:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577610-577796:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:577414-577532:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:577152-577263:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:576712-576925:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:576457-576631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:576329-576383:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:575513-575619:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575186-575417:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:575011-575095:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:574311-574408:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:574188-574211:-1:exon

position:574188:-1
position: 574188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574211:-1
position: 574211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:573444-573582:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:572782-573150:-1:exon

AP3B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: AP3B2
product: adaptor related protein complex 3 subunit beta 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_019619300.2
SIO_010081: AP3B2
subclass of: SO_0000673
so part of: AP3B2
location: complement(join(572782..573150,573444..573582,574188..574211,574311..574408,575011..575095,575186..575417,575513..575619,576329..576383,576457..576631,576712..576925,577152..577263,577414..577532,577610..577796,577876..578052,578130..578239,578321..578453,578675..578737,578903..578974,579125..579179,579341..579438,579683..579859,579976..580158,580456..580522,580704..580864,580953..581048,581123..581197,581302..581934))
location: region:572782-581934:-1
so has part: feature:581302-581934:-1:exon
so has part: feature:581123-581197:-1:exon
so has part: feature:580953-581048:-1:exon
so has part: feature:580704-580864:-1:exon
so has part: feature:580456-580522:-1:exon
so has part: feature:579976-580158:-1:exon
so has part: feature:579683-579859:-1:exon
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so has part: feature:578903-578974:-1:exon
so has part: feature:578675-578737:-1:exon
so has part: feature:578321-578453:-1:exon
so has part: feature:578130-578239:-1:exon
so has part: feature:577876-578052:-1:exon
so has part: feature:577610-577796:-1:exon
so has part: feature:577414-577532:-1:exon
so has part: feature:577152-577263:-1:exon
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so has part: feature:576457-576631:-1:exon
so has part: feature:576329-576383:-1:exon
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so has part: feature:575011-575095:-1:exon
so has part: feature:574311-574408:-1:exon
so has part: feature:574188-574211:-1:exon
so has part: feature:573444-573582:-1:exon
so has part: feature:572782-573150:-1:exon

position:581934:-1
position: 581934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581302-581934:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581123-581197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580953-581048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580704-580864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580456-580522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579976-580158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579683-579859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579341-579438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579125-579179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:578903-578974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:578675-578737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:578321-578453:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:578130-578239:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577876-578052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:577610-577796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:577414-577532:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:577152-577263:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:576712-576925:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:576457-576631:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:576329-576383:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575513-575619:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:575186-575417:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:575011-575095:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:574311-574408:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:574188-574211:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:573444-573582:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:572782-573150:-1:exon

AP3B2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: AP3B2
product: adaptor related protein complex 3 subunit beta 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010717131.3
SIO_010081: AP3B2
subclass of: SO_0000673
so part of: AP3B2
location: complement(join(572782..573150,573444..573582,574311..574408,575011..575095,575186..575417,575513..575619,576329..576383,576457..576631,576712..576925,577152..577263,577414..577532,577610..577796,577876..578052,578130..578239,578321..578453,578675..578737,578903..578974,579125..579179,579341..579438,579683..579859,579976..580158,580456..580522,580704..580864,580953..581048,581123..581197,581302..581933))
location: region:572782-581933:-1
so has part: feature:581302-581933:-1:exon
so has part: feature:581123-581197:-1:exon
so has part: feature:580953-581048:-1:exon
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so has part: feature:578321-578453:-1:exon
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so has part: feature:577152-577263:-1:exon
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so has part: feature:576457-576631:-1:exon
so has part: feature:576329-576383:-1:exon
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so has part: feature:575186-575417:-1:exon
so has part: feature:575011-575095:-1:exon
so has part: feature:574311-574408:-1:exon
so has part: feature:573444-573582:-1:exon
so has part: feature:572782-573150:-1:exon

position:581933:-1
position: 581933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581302-581933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581123-581197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580953-581048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580704-580864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580456-580522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579976-580158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579683-579859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579341-579438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579125-579179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:578903-578974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:578675-578737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:578321-578453:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:578130-578239:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577876-578052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:577610-577796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:577414-577532:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:577152-577263:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:576712-576925:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:576457-576631:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:576329-576383:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575513-575619:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:575186-575417:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:575011-575095:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:574311-574408:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:573444-573582:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:572782-573150:-1:exon

AP3B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: AP3B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit beta-2 isoform X4
translation: MLSLPPVQKLLRPKSVAGSDAAEEVTSPVLATEAGPPTCYSALHADELRPLAAPKDEVSARTEQPPRHDDLKEMLDSNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVIINMLTRYARTQFLSPNQNESLLEESAEKAFYGSEEEDTKDAKAEAASLAKRKPYVMDPDHRLLLRNTKPLLQSRNAAVVMAVAQLYFHLAPKAEVGVIAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNISTILREFQTYIRSMDKDFVAATIQAIGRCATNIGKVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHSEIIKHMAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTNEEDIVKLQVINLAAKLYLTNSKQSKLLTQYVLNLAKYDQNYDIRDRARFIRQLIVPTEKSGALNKYAKKLFLAQKPAPILESSFKDRDHFQLGSLSHLLNAKAVGYQELPDWPDEAPDPSVRNVEVPEWTKCTSREKRKEKVEKPFYSDSEGESGPTESADSEPESDSEESGSSSSSGTSSSSSEEEEEEDEEEEEEGSGEQSEDKEGEEEEEKRKKRKEKGGPRKASPGSMGSEEEEEAEGKKVKKAAGPQGKKGHAESSSEEASASESSSSGSDSGTEAPTVVEAKRRKMIPSSKAGPKEISLLDLDDFTPPPPQPVPSSSIISTSLVTDLEGLTLSDTSLAPALLSPAFGAVRTYELLHRMAGEGLSVEYCFSRRPFPGDPHMVAVQIQISNNTDAEVKSLRVSEPKLLAGMRIQEFPEIESLAPGDTASMVMGIDFCDSTQAANFQLCTHTRHFYVSIQPPVGELMAPVFMSENEFRKEQGKLTGMSEITEKLTLPEKCRSDHAIVQQVTSAANVGRVPCGSDNEYRFAAKTVTSGSLVLITLERREGAAAQLTINSEKMVIGTMLVKDIIQALAQ
SIO_010081: AP3B2
subclass of: SO_0000673
so part of: AP3B2
location: complement(join(573000..573150,573444..573582,574311..574408,575011..575095,575186..575417,575513..575619,576329..576383,576457..576631,576712..576925,577152..577263,577414..577532,577610..577796,577876..578052,578130..578239,578321..578453,578675..578737,578903..578974,579125..579179,579341..579438,579683..579859,579976..580158,580456..580522,580704..580864,580953..581048,581123..581197,581302..581377,581962..582161))
location: region:573000-582161:-1
so has part: feature:581962-582161:-1:exon
so has part: feature:581302-581377:-1:exon
so has part: feature:581123-581197:-1:exon
so has part: feature:580953-581048:-1:exon
so has part: feature:580704-580864:-1:exon
so has part: feature:580456-580522:-1:exon
so has part: feature:579976-580158:-1:exon
so has part: feature:579683-579859:-1:exon
so has part: feature:579341-579438:-1:exon
so has part: feature:579125-579179:-1:exon
so has part: feature:578903-578974:-1:exon
so has part: feature:578675-578737:-1:exon
so has part: feature:578321-578453:-1:exon
so has part: feature:578130-578239:-1:exon
so has part: feature:577876-578052:-1:exon
so has part: feature:577610-577796:-1:exon
so has part: feature:577414-577532:-1:exon
so has part: feature:577152-577263:-1:exon
so has part: feature:576712-576925:-1:exon
so has part: feature:576457-576631:-1:exon
so has part: feature:576329-576383:-1:exon
so has part: feature:575513-575619:-1:exon
so has part: feature:575186-575417:-1:exon
so has part: feature:575011-575095:-1:exon
so has part: feature:574311-574408:-1:exon
so has part: feature:573444-573582:-1:exon
so has part: feature:573000-573150:-1:exon

XP_031411047.1
type: Protein
SIO_000068: ncbiprotein

position:573000:-1
position: 573000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582161:-1
position: 582161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581962-582161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581302-581377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581123-581197:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580953-581048:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580704-580864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:580456-580522:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579976-580158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579683-579859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579341-579438:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:579125-579179:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:578903-578974:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:578675-578737:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:578321-578453:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:578130-578239:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:577876-578052:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:577610-577796:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:577414-577532:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577152-577263:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:576712-576925:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:576457-576631:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:576329-576383:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:575513-575619:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:575186-575417:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:575011-575095:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:574311-574408:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:573444-573582:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:573000-573150:-1:exon

AP3B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: AP3B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit beta-2 isoform X3
translation: MLDSNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVIINMLTRYARTQFLSPNQNVVMAVAQLYFHLAPKAEVGVIAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNISTILREFQTYIRSMDKDFVAATIQAIGRCATNIGKVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHSEIIKHMAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTNEEDIVKLQVINLAAKLYLTNSKQSKLLTQYVLNLAKYDQNYDIRDRARFIRQLIVPTEKSGALNKYAKKLFLAQKPAPILESSFKDRDHFQLGSLSHLLNAKAVGYQELPDWPDEAPDPSVRNVEVPEWTKCTSREKRKEKVEKPFYSDSEGESGPTESADSEPESDSEESGSSSSSGTSSSSSEEEEEEDEEEEEEGSGEQSEDKEGEEEEEKRKKRKEKGGPRKASPGSMGSEEEEEAEGKKVKKAAGPQGKKGHAESSSEEASASESSSSGSDSGTEAPTVVEAKRRKMIPSSKAGPKEISLLDLDDFTPPPPQPVPSSSIISTSLVTDLEGLTLSDTSLAPALLSPAFGAVRTYELLHRMAGEGLSVEYCFSRRPFPGDPHMVAVQIQISNNTDAEVKSLRVSEPKLLAGMRIQEFPEIESLAPGDTASMVMGIDFCDSTQAANFQLCTHTRHFYVSIQPPVGELMAPVFMSENEFRKEQEHLVRRGKGKLTGMSEITEKLTLPEKCRSDHAIVQQVTSAANVGRVPCGSDNEYRFAAKTVTSGSLVLITLERREGAAAQLTINSEKMVIGTMLVKDIIQALAQ
SIO_010081: AP3B2
subclass of: SO_0000673
so part of: AP3B2
location: complement(join(573000..573150,573444..573582,574188..574211,574311..574408,575011..575095,575186..575417,575513..575619,576329..576383,576457..576631,576712..576925,577152..577263,577414..577532,577610..577796,577876..578052,578130..578239,578321..578453,578675..578737,578903..578974,579125..579179,579341..579438,579976..580158,580456..580522,580704..580864,580953..581048,581123..581197,581302..581358))
location: region:573000-581358:-1
so has part: feature:581302-581358:-1:exon
so has part: feature:581123-581197:-1:exon
so has part: feature:580953-581048:-1:exon
so has part: feature:580704-580864:-1:exon
so has part: feature:580456-580522:-1:exon
so has part: feature:579976-580158:-1:exon
so has part: feature:579341-579438:-1:exon
so has part: feature:579125-579179:-1:exon
so has part: feature:578903-578974:-1:exon
so has part: feature:578675-578737:-1:exon
so has part: feature:578321-578453:-1:exon
so has part: feature:578130-578239:-1:exon
so has part: feature:577876-578052:-1:exon
so has part: feature:577610-577796:-1:exon
so has part: feature:577414-577532:-1:exon
so has part: feature:577152-577263:-1:exon
so has part: feature:576712-576925:-1:exon
so has part: feature:576457-576631:-1:exon
so has part: feature:576329-576383:-1:exon
so has part: feature:575513-575619:-1:exon
so has part: feature:575186-575417:-1:exon
so has part: feature:575011-575095:-1:exon
so has part: feature:574311-574408:-1:exon
so has part: feature:574188-574211:-1:exon
so has part: feature:573444-573582:-1:exon
so has part: feature:573000-573150:-1:exon

XP_019474848.1
type: Protein
SIO_000068: ncbiprotein

position:581358:-1
position: 581358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581302-581358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581123-581197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580953-581048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580704-580864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580456-580522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579976-580158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579341-579438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579125-579179:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:578903-578974:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:578675-578737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:578321-578453:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:578130-578239:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:577876-578052:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577610-577796:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:577414-577532:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:577152-577263:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:576712-576925:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:576457-576631:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:576329-576383:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:575513-575619:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575186-575417:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:575011-575095:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:574311-574408:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:574188-574211:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:573444-573582:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:573000-573150:-1:exon

AP3B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: AP3B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit beta-2 isoform X2
translation: MLDSNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVIINMLTRYARTQFLSPNQNESLLEESAEKAFYGSEEEDTKDAKAEAASLAKRKPYVMDPDHRLLLRNTKPLLQSRNAAVVMAVAQLYFHLAPKAEVGVIAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNISTILREFQTYIRSMDKDFVAATIQAIGRCATNIGKVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHSEIIKHMAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTNEEDIVKLQVINLAAKLYLTNSKQSKLLTQYVLNLAKYDQNYDIRDRARFIRQLIVPTEKSGALNKYAKKLFLAQKPAPILESSFKDRDHFQLGSLSHLLNAKAVGYQELPDWPDEAPDPSVRNVEVPEWTKCTSREKRKEKVEKPFYSDSEGESGPTESADSEPESDSEESGSSSSSGTSSSSSEEEEEEDEEEEEEGSGEQSEDKEGEEEEEKRKKRKEKGGPRKASPGSMGSEEEEEAEGKKVKKAAGPQGKKGHAESSSEEASASESSSSGSDSGTEAPTVVEAKRRKMIPSSKAGPKEISLLDLDDFTPPPPQPVPSSSIISTSLVTDLEGLTLSDTSLAPALLSPAFGAVRTYELLHRMAGEGLSVEYCFSRRPFPGDPHMVAVQIQISNNTDAEVKSLRVSEPKLLAGMRIQEFPEIESLAPGDTASMVMGIDFCDSTQAANFQLCTHTRHFYVSIQPPVGELMAPVFMSENEFRKEQGKLTGMSEITEKLTLPEKCRSDHAIVQQVTSAANVGRVPCGSDNEYRFAAKTVTSGSLVLITLERREGAAAQLTINSEKMVIGTMLVKDIIQALAQ
SIO_010081: AP3B2
subclass of: SO_0000673
so part of: AP3B2
location: complement(join(573000..573150,573444..573582,574311..574408,575011..575095,575186..575417,575513..575619,576329..576383,576457..576631,576712..576925,577152..577263,577414..577532,577610..577796,577876..578052,578130..578239,578321..578453,578675..578737,578903..578974,579125..579179,579341..579438,579683..579859,579976..580158,580456..580522,580704..580864,580953..581048,581123..581197,581302..581358))
location: region:573000-581358:-1
so has part: feature:581302-581358:-1:exon
so has part: feature:581123-581197:-1:exon
so has part: feature:580953-581048:-1:exon
so has part: feature:580704-580864:-1:exon
so has part: feature:580456-580522:-1:exon
so has part: feature:579976-580158:-1:exon
so has part: feature:579683-579859:-1:exon
so has part: feature:579341-579438:-1:exon
so has part: feature:579125-579179:-1:exon
so has part: feature:578903-578974:-1:exon
so has part: feature:578675-578737:-1:exon
so has part: feature:578321-578453:-1:exon
so has part: feature:578130-578239:-1:exon
so has part: feature:577876-578052:-1:exon
so has part: feature:577610-577796:-1:exon
so has part: feature:577414-577532:-1:exon
so has part: feature:577152-577263:-1:exon
so has part: feature:576712-576925:-1:exon
so has part: feature:576457-576631:-1:exon
so has part: feature:576329-576383:-1:exon
so has part: feature:575513-575619:-1:exon
so has part: feature:575186-575417:-1:exon
so has part: feature:575011-575095:-1:exon
so has part: feature:574311-574408:-1:exon
so has part: feature:573444-573582:-1:exon
so has part: feature:573000-573150:-1:exon

XP_010715433.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581302-581358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581123-581197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580953-581048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580704-580864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580456-580522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579976-580158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579683-579859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579341-579438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579125-579179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:578903-578974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:578675-578737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:578321-578453:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:578130-578239:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577876-578052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:577610-577796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:577414-577532:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:577152-577263:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:576712-576925:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:576457-576631:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:576329-576383:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575513-575619:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:575186-575417:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:575011-575095:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:574311-574408:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:573444-573582:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:573000-573150:-1:exon

AP3B2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: AP3B2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit beta-2 isoform X1
translation: MLDSNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQKDQLIEVIEKLLADKTTLVAGSVVMAFEEVCPERIDLIHKNYRKLCNLLIDVEEWGQVVIINMLTRYARTQFLSPNQNESLLEESAEKAFYGSEEEDTKDAKAEAASLAKRKPYVMDPDHRLLLRNTKPLLQSRNAAVVMAVAQLYFHLAPKAEVGVIAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNISTILREFQTYIRSMDKDFVAATIQAIGRCATNIGKVRDTCLNGLVQLLSNRDELVVAESVVVIKKLLQMQPAQHSEIIKHMAKLTDNIQVPMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTNEEDIVKLQVINLAAKLYLTNSKQSKLLTQYVLNLAKYDQNYDIRDRARFIRQLIVPTEKSGALNKYAKKLFLAQKPAPILESSFKDRDHFQLGSLSHLLNAKAVGYQELPDWPDEAPDPSVRNVEVPEWTKCTSREKRKEKVEKPFYSDSEGESGPTESADSEPESDSEESGSSSSSGTSSSSSEEEEEEDEEEEEEGSGEQSEDKEGEEEEEKRKKRKEKGGPRKASPGSMGSEEEEEAEGKKVKKAAGPQGKKGHAESSSEEASASESSSSGSDSGTEAPTVVEAKRRKMIPSSKAGPKEISLLDLDDFTPPPPQPVPSSSIISTSLVTDLEGLTLSDTSLAPALLSPAFGAVRTYELLHRMAGEGLSVEYCFSRRPFPGDPHMVAVQIQISNNTDAEVKSLRVSEPKLLAGMRIQEFPEIESLAPGDTASMVMGIDFCDSTQAANFQLCTHTRHFYVSIQPPVGELMAPVFMSENEFRKEQEHLVRRGKGKLTGMSEITEKLTLPEKCRSDHAIVQQVTSAANVGRVPCGSDNEYRFAAKTVTSGSLVLITLERREGAAAQLTINSEKMVIGTMLVKDIIQALAQ
SIO_010081: AP3B2
subclass of: SO_0000673
so part of: AP3B2
location: complement(join(573000..573150,573444..573582,574188..574211,574311..574408,575011..575095,575186..575417,575513..575619,576329..576383,576457..576631,576712..576925,577152..577263,577414..577532,577610..577796,577876..578052,578130..578239,578321..578453,578675..578737,578903..578974,579125..579179,579341..579438,579683..579859,579976..580158,580456..580522,580704..580864,580953..581048,581123..581197,581302..581358))
location: region:573000-581358:-1
so has part: feature:581302-581358:-1:exon
so has part: feature:581123-581197:-1:exon
so has part: feature:580953-581048:-1:exon
so has part: feature:580704-580864:-1:exon
so has part: feature:580456-580522:-1:exon
so has part: feature:579976-580158:-1:exon
so has part: feature:579683-579859:-1:exon
so has part: feature:579341-579438:-1:exon
so has part: feature:579125-579179:-1:exon
so has part: feature:578903-578974:-1:exon
so has part: feature:578675-578737:-1:exon
so has part: feature:578321-578453:-1:exon
so has part: feature:578130-578239:-1:exon
so has part: feature:577876-578052:-1:exon
so has part: feature:577610-577796:-1:exon
so has part: feature:577414-577532:-1:exon
so has part: feature:577152-577263:-1:exon
so has part: feature:576712-576925:-1:exon
so has part: feature:576457-576631:-1:exon
so has part: feature:576329-576383:-1:exon
so has part: feature:575513-575619:-1:exon
so has part: feature:575186-575417:-1:exon
so has part: feature:575011-575095:-1:exon
so has part: feature:574311-574408:-1:exon
so has part: feature:574188-574211:-1:exon
so has part: feature:573444-573582:-1:exon
so has part: feature:573000-573150:-1:exon

XP_019474845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:581302-581358:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581123-581197:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580953-581048:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580704-580864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580456-580522:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579976-580158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:579683-579859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:579341-579438:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:579125-579179:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:578903-578974:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:578675-578737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:578321-578453:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:578130-578239:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:577876-578052:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:577610-577796:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:577414-577532:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:577152-577263:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:576712-576925:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:576457-576631:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:576329-576383:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:575513-575619:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:575186-575417:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:575011-575095:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:574311-574408:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:574188-574211:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:573444-573582:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:573000-573150:-1:exon

LOC109369557
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(598729..601165)
location: region:598729-601165:-1
so has part: feature:598729-601165:-1:exon
subclass of: SO_0000010

109369557
type: Gene
SIO_000068: ncbigene

position:598729:-1
position: 598729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:601165:-1
position: 601165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:598729-601165:-1:exon

LOC109369557
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369557
product: uncharacterized LOC109369557
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031555192.1
SIO_010081: LOC109369557
subclass of: SO_0000673
so part of: LOC109369557
location: complement(join(598729..599165,599237..599469,599906..600358,600504..600560,600794..600881,600974..601165))
location: region:598729-601165:-1
so has part: feature:600974-601165:-1:exon
so has part: feature:600794-600881:-1:exon
so has part: feature:600504-600560:-1:exon
so has part: feature:599906-600358:-1:exon
so has part: feature:599237-599469:-1:exon
so has part: feature:598729-599165:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:600974-601165:-1:exon

position:600974:-1
position: 600974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:600794-600881:-1:exon

position:600794:-1
position: 600794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600881:-1
position: 600881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:600504-600560:-1:exon

position:600504:-1
position: 600504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600560:-1
position: 600560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:599906-600358:-1:exon

position:599906:-1
position: 599906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600358:-1
position: 600358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:599237-599469:-1:exon

position:599237:-1
position: 599237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599469:-1
position: 599469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:598729-599165:-1:exon

position:599165:-1
position: 599165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109369557
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369557
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109369557
translation: MVALDSSCPPELAGDDLPDLFPGPWRSKSLQDRDKPVGWHLAGGDMWWCPQAVAGAASTAAFFLCEGLLGWHFDVVPNGAAEPQPGDLFLFPLTSRRPGWWGAHAGVYCGDGEIIHLEGTSGTSPTGIVAKHSKSHLLRTRGPAKVLRMKAGLDAAALQWRIRAAMDMVLEYDAVTCNCIHFALALLGLGQLTGDMTFPVLQ
SIO_010081: LOC109369557
subclass of: SO_0000673
so part of: LOC109369557
location: complement(join(599145..599165,599237..599469,599906..600260))
location: region:599145-600260:-1
so has part: feature:599906-600260:-1:exon
so has part: feature:599237-599469:-1:exon
so has part: feature:599145-599165:-1:exon

XP_031411052.1
type: Protein
SIO_000068: ncbiprotein

position:599145:-1
position: 599145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:600260:-1
position: 600260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:599906-600260:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:599237-599469:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:599145-599165:-1:exon

NR2E3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NR2E3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 603775..607778
location: region:603775-607778:1
so has part: feature:603775-607778:1:exon
subclass of: SO_0000010

100540956
type: Gene
SIO_000068: ncbigene

position:603775:1
position: 603775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607778:1
position: 607778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603775-607778:1:exon

NR2E3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NR2E3
product: nuclear receptor subfamily 2 group E member 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555193.1
SIO_010081: NR2E3
subclass of: SO_0000673
so part of: NR2E3
location: join(603775..604004,605178..605328,605772..605875,605952..606204,606273..606454,606629..606860,606929..607034,607102..607778)
location: region:603775-607778:1
so has part: feature:603775-604004:1:exon
so has part: feature:605178-605328:1:exon
so has part: feature:605772-605875:1:exon
so has part: feature:605952-606204:1:exon
so has part: feature:606273-606454:1:exon
so has part: feature:606629-606860:1:exon
so has part: feature:606929-607034:1:exon
so has part: feature:607102-607778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:603775-604004:1:exon

position:604004:1
position: 604004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:605178-605328:1:exon

position:605178:1
position: 605178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605328:1
position: 605328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:605772-605875:1:exon

position:605772:1
position: 605772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:605875:1
position: 605875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:605952-606204:1:exon

position:605952:1
position: 605952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606204:1
position: 606204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:606273-606454:1:exon

position:606273:1
position: 606273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606454:1
position: 606454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:606629-606860:1:exon

position:606629:1
position: 606629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:606860:1
position: 606860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:606929-607034:1:exon

position:606929:1
position: 606929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607034:1
position: 607034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:607102-607778:1:exon

position:607102:1
position: 607102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NR2E3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NR2E3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: photoreceptor-specific nuclear receptor
translation: MAASPEGSVVSAGLEDSPSGLSPAPGKALSPVLLCKVCGDTSSGKHYGIYACNGCSGFFKRSVRRKLIYRCQAGTGLCPVDKAHRNQCQACRLKKCLQAGMNKDAVQNERQPRSTAQVRLDSIELDAELAPEQVAATRDVPRFPXPGPRGPGATAATAAVPRTPTPPTNHRFMASLMTAETCAKLEPEDVDETVDVTGGEPERAGGEYQVAPYPAAGPENVYETSARLLFMAVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLCAIQWSMPLESCPLLAVPEPSPGKLLPAAVDVRALQETLGRFKALAVDPTEFACMKAVVLFKPETRGLKDPEQVENLQDQSQVMLGQHNRSHYPGQPVRFGKLLLLLPALRFLSSERVELLFFRRTIGNTPMEKLLCDMFKN
SIO_010081: NR2E3
subclass of: SO_0000673
so part of: NR2E3
location: join(603947..604004,605178..605328,605772..605875,605952..606204,606273..606454,606629..606860,606929..607034,607102..607234)
location: region:603947-607234:1
so has part: feature:603947-604004:1:exon
so has part: feature:605178-605328:1:exon
so has part: feature:605772-605875:1:exon
so has part: feature:605952-606204:1:exon
so has part: feature:606273-606454:1:exon
so has part: feature:606629-606860:1:exon
so has part: feature:606929-607034:1:exon
so has part: feature:607102-607234:1:exon

XP_031411053.1
type: Protein
SIO_000068: ncbiprotein

position:603947:1
position: 603947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:607234:1
position: 607234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:603947-604004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:605178-605328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:605772-605875:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:605952-606204:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:606273-606454:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:606629-606860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606929-607034:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607102-607234:1:exon

MYO9A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MYO9A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(607872..744254)
location: region:607872-744254:-1
so has part: feature:607872-744254:-1:exon
subclass of: SO_0000010

100541109
type: Gene
SIO_000068: ncbigene

position:607872:-1
position: 607872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744254:-1
position: 744254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607872-744254:-1:exon

MYO9A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MYO9A
product: myosin IXA
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_010717130.3
SIO_010081: MYO9A
subclass of: SO_0000673
so part of: MYO9A
location: complement(join(607872..610258,610635..610777,610974..611176,614116..614239,615329..615460,615564..615669,616240..616368,616557..616749,620358..620419,621316..621427,622027..622074,622944..623132,623566..623682,624169..624392,625921..626078,626350..626462,631325..631537,632049..632130,633691..635357,636314..636624,636869..637018,637329..637451,638703..638813,639666..639746,643196..643318,644421..644460,645213..645356,649285..649360,653119..653238,657564..657759,658465..658606,659723..659844,675020..675154,681927..682043,698581..698670,704920..705046,707443..707540,710577..710633,713205..713304,717267..717329,721091..721185,743319..744254))
location: region:607872-744254:-1
so has part: feature:743319-744254:-1:exon
so has part: feature:721091-721185:-1:exon
so has part: feature:717267-717329:-1:exon
so has part: feature:713205-713304:-1:exon
so has part: feature:710577-710633:-1:exon
so has part: feature:707443-707540:-1:exon
so has part: feature:704920-705046:-1:exon
so has part: feature:698581-698670:-1:exon
so has part: feature:681927-682043:-1:exon
so has part: feature:675020-675154:-1:exon
so has part: feature:659723-659844:-1:exon
so has part: feature:658465-658606:-1:exon
so has part: feature:657564-657759:-1:exon
so has part: feature:653119-653238:-1:exon
so has part: feature:649285-649360:-1:exon
so has part: feature:645213-645356:-1:exon
so has part: feature:644421-644460:-1:exon
so has part: feature:643196-643318:-1:exon
so has part: feature:639666-639746:-1:exon
so has part: feature:638703-638813:-1:exon
so has part: feature:637329-637451:-1:exon
so has part: feature:636869-637018:-1:exon
so has part: feature:636314-636624:-1:exon
so has part: feature:633691-635357:-1:exon
so has part: feature:632049-632130:-1:exon
so has part: feature:631325-631537:-1:exon
so has part: feature:626350-626462:-1:exon
so has part: feature:625921-626078:-1:exon
so has part: feature:624169-624392:-1:exon
so has part: feature:623566-623682:-1:exon
so has part: feature:622944-623132:-1:exon
so has part: feature:622027-622074:-1:exon
so has part: feature:621316-621427:-1:exon
so has part: feature:620358-620419:-1:exon
so has part: feature:616557-616749:-1:exon
so has part: feature:616240-616368:-1:exon
so has part: feature:615564-615669:-1:exon
so has part: feature:615329-615460:-1:exon
so has part: feature:614116-614239:-1:exon
so has part: feature:610974-611176:-1:exon
so has part: feature:610635-610777:-1:exon
so has part: feature:607872-610258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:743319-744254:-1:exon

position:743319:-1
position: 743319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721091-721185:-1:exon

position:721091:-1
position: 721091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:721185:-1
position: 721185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:717267-717329:-1:exon

position:717267:-1
position: 717267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717329:-1
position: 717329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:713205-713304:-1:exon

position:713205:-1
position: 713205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713304:-1
position: 713304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710577-710633:-1:exon

position:710577:-1
position: 710577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710633:-1
position: 710633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:707443-707540:-1:exon

position:707443:-1
position: 707443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707540:-1
position: 707540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:704920-705046:-1:exon

position:704920:-1
position: 704920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705046:-1
position: 705046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:698581-698670:-1:exon

position:698581:-1
position: 698581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698670:-1
position: 698670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:681927-682043:-1:exon

position:681927:-1
position: 681927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:682043:-1
position: 682043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:675020-675154:-1:exon

position:675020:-1
position: 675020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675154:-1
position: 675154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:659723-659844:-1:exon

position:659723:-1
position: 659723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:659844:-1
position: 659844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:658465-658606:-1:exon

position:658465:-1
position: 658465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:658606:-1
position: 658606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:657564-657759:-1:exon

position:657564:-1
position: 657564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:657759:-1
position: 657759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:653119-653238:-1:exon

position:653119:-1
position: 653119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:653238:-1
position: 653238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:649285-649360:-1:exon

position:649285:-1
position: 649285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:649360:-1
position: 649360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:645213-645356:-1:exon

position:645213:-1
position: 645213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:645356:-1
position: 645356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:644421-644460:-1:exon

position:644421:-1
position: 644421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:644460:-1
position: 644460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:643196-643318:-1:exon

position:643196:-1
position: 643196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:643318:-1
position: 643318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:639666-639746:-1:exon

position:639666:-1
position: 639666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:639746:-1
position: 639746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:638703-638813:-1:exon

position:638703:-1
position: 638703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:638813:-1
position: 638813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:637329-637451:-1:exon

position:637329:-1
position: 637329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637451:-1
position: 637451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:636869-637018:-1:exon

position:636869:-1
position: 636869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:637018:-1
position: 637018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:636314-636624:-1:exon

position:636314:-1
position: 636314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:636624:-1
position: 636624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:633691-635357:-1:exon

position:633691:-1
position: 633691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635357:-1
position: 635357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:632049-632130:-1:exon

position:632049:-1
position: 632049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:632130:-1
position: 632130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:631325-631537:-1:exon

position:631325:-1
position: 631325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631537:-1
position: 631537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:626350-626462:-1:exon

position:626350:-1
position: 626350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626462:-1
position: 626462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:625921-626078:-1:exon

position:625921:-1
position: 625921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:626078:-1
position: 626078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:624169-624392:-1:exon

position:624169:-1
position: 624169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:624392:-1
position: 624392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:623566-623682:-1:exon

position:623566:-1
position: 623566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623682:-1
position: 623682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:622944-623132:-1:exon

position:622944:-1
position: 622944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623132:-1
position: 623132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:622027-622074:-1:exon

position:622027:-1
position: 622027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622074:-1
position: 622074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:621316-621427:-1:exon

position:621316:-1
position: 621316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621427:-1
position: 621427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:620358-620419:-1:exon

position:620358:-1
position: 620358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620419:-1
position: 620419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:616557-616749:-1:exon

position:616557:-1
position: 616557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616749:-1
position: 616749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:616240-616368:-1:exon

position:616240:-1
position: 616240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616368:-1
position: 616368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:615564-615669:-1:exon

position:615564:-1
position: 615564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615669:-1
position: 615669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:615329-615460:-1:exon

position:615329:-1
position: 615329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615460:-1
position: 615460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:614116-614239:-1:exon

position:614116:-1
position: 614116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614239:-1
position: 614239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:610974-611176:-1:exon

position:610974:-1
position: 610974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:611176:-1
position: 611176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:610635-610777:-1:exon

position:610635:-1
position: 610635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610777:-1
position: 610777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:607872-610258:-1:exon

position:610258:-1
position: 610258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYO9A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MYO9A
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: unconventional myosin-IXa
translation: MSVNDVGGRRRFEDSEYTLHIYPGSIAEGTIYCPITARKTSTAAEVIDSLINKLQLEKTKCYVLAEVKEFGGEEWILNPTDCPVQRMMLWPRMALENRTSGEDYRFLLREKNLDGSIHYGSLQSWLRVTEERRRMVERGFLPQPQQKDYDDLCGLPDLNEKTLLENLRNRFKQEKIYTYVGSILIVINPFKFLPIYNPKYVKMYDNHQLGKLEPHIYAVADVAYHAMLQRRKNQCIVISGESGSGKTQSTNFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQETGTVRGAYVEKYLLEKSRLVYQEHNERNYHVFYYLLAGASEEERSAFHLKQPEEYHYLNQMTKKPLRQSWDEYCYDSEPDCFSVEGEDLKHDFERLQLAMEMVGFLPKTRRQIFSLLSAILHLGNIRYKKKTYRDDSIDICNPEILPIVSDLLEVKEEMLFEALVTRKTVTVGEKLILPYKLAEAVTVRNSMAKSLYSALFDWIVFRINHALLNSKDMEESTKTLSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFKLEQEEYRAEGISWHNIDYIDNSGCINLISKKPTGLLHLLDEESNFPQATNQTLLDKFKRQHEGNSYIEFPAVMEPAFIIKHYAGKVKYGVKDFREKNTDHMRPDIVALLRSSKNAFICGMIGIDPVAVFRWAVLRAFFRAMVAFREAGKRYVEKKTGHDDAVPCAVLKSVDSFSFLHHPVHQRSLEILQRCKEEKYSITRKSPRTPLSDLQGVNTINERSQWDAFAVGWNGRMGMRHSRLTSPSSFLDKDGIFVNATNSKLLERAHGILMRNKNCKAKPNLPKHMLDVKSLKHLTNLTLHDHITKSLLHLHKKKKPPSISAQFQASLNKLMETLGQAEPYFVKCIRSNAEKLPLRFSDSLVLRQLRYTGMLETVRIRQSGYSCKYSFQDFVNHFHVLLPQGINPSKHNVHDFFRKIKLNPDNYQVGRTMVFVKERERQFLQDLLHQEVLRRIVLLQHWFRSMLCRRQFLNMRQAAVIIQRFWRSYQSRKQGKPSPDPLVLSKAALVLQTHWRGFVERRRFLQMQFAAHLIQSCWREHLKRRHEAAASIQAAWRGHRAQQWYRASRRGVLCLQAACRGYLARQRFRALKEQRLKEMQLENGLSIREEDGLEEDGALEIKGSDPSKWEDGSFEERVRAIEEHKSLMENNRVNHLDLLDTSATSSYKRHERASSQSGMDTEEEVIVRERPKSLEDLNQKKVVRAKRESRRMRELEQAKFSLELLKVRSTGGLSPSEERQWSTELVSEALHSPQGTPESESSQGSLEMLSCEDTPSKHVPLDVQLLPTESRDSLPSSPQPHLQDKSFCAADVNSNLSICRRMLSDSELPDNRTAKEHVVCDPQNIYRMHPRETFLSSNLPTFYIPPQDNVKVKQSQVDNNLKNKAVEREEKTALFSEMRKDSEQDQGKVLGGEEGEKSSAKREERGTAAATQTHSPDSVIKRLEKLNVEKEERQKQLQLQNEREMMEQIRQQKEILERQRKAFEQLEKQGRVEALQRAELSRMKDPALKPSKKPDSRPQSVLILHTQNRTEHSVAPGGTPASSVDIKGLTVGSRGGSPAHAAPKDRPVSMFMERREGPAGAALESRGNPRLAADPRDAPGSPFSRISRNERLRQPRVPSQPGEEMRAGAMFFTPRDNPFGLHREASHQCLPKGELARKPFKMPGSGRGEVPRPTHKKKARMARTRSDFLTRGTFADGEGDTEEDDYDGNFEFLLSSDLPPHPEAGPAARLGQACYSDSEMTVQRFSSGDGQPKLHKTMSQGEIGKLAATQKPLAPDGRSQRAKMRFWVKGKQGEKKTPREKLATQSELLELYAEQEVPSREVAAGLQLGEELGPHHLTPPRSPELSGIYRREFKENKEPSPKVKRKRSVKISSVALEPVQWQNDSLQIITSASDLKSMDEFLLKKMNELDSEDSKKDTLVDVVFKKALKEFR…
SIO_010081: MYO9A
subclass of: SO_0000673
so part of: MYO9A
location: complement(join(609807..610258,610635..610777,610974..611176,614116..614239,615329..615460,615564..615669,616240..616368,616557..616749,620358..620419,621316..621427,622027..622074,622944..623132,623566..623682,624169..624392,625921..626078,626350..626462,631325..631537,632049..632130,633691..635357,636314..636624,636869..637018,637329..637451,638703..638813,639666..639746,643196..643318,644421..644460,645213..645356,649285..649360,653119..653238,657564..657759,658465..658606,659723..659844,675020..675154,681927..682043,698581..698670,704920..705046,707443..707540,710577..710633,713205..713304,717267..717329,721091..721185,743319..744161))
location: region:609807-744161:-1
so has part: feature:743319-744161:-1:exon
so has part: feature:721091-721185:-1:exon
so has part: feature:717267-717329:-1:exon
so has part: feature:713205-713304:-1:exon
so has part: feature:710577-710633:-1:exon
so has part: feature:707443-707540:-1:exon
so has part: feature:704920-705046:-1:exon
so has part: feature:698581-698670:-1:exon
so has part: feature:681927-682043:-1:exon
so has part: feature:675020-675154:-1:exon
so has part: feature:659723-659844:-1:exon
so has part: feature:658465-658606:-1:exon
so has part: feature:657564-657759:-1:exon
so has part: feature:653119-653238:-1:exon
so has part: feature:649285-649360:-1:exon
so has part: feature:645213-645356:-1:exon
so has part: feature:644421-644460:-1:exon
so has part: feature:643196-643318:-1:exon
so has part: feature:639666-639746:-1:exon
so has part: feature:638703-638813:-1:exon
so has part: feature:637329-637451:-1:exon
so has part: feature:636869-637018:-1:exon
so has part: feature:636314-636624:-1:exon
so has part: feature:633691-635357:-1:exon
so has part: feature:632049-632130:-1:exon
so has part: feature:631325-631537:-1:exon
so has part: feature:626350-626462:-1:exon
so has part: feature:625921-626078:-1:exon
so has part: feature:624169-624392:-1:exon
so has part: feature:623566-623682:-1:exon
so has part: feature:622944-623132:-1:exon
so has part: feature:622027-622074:-1:exon
so has part: feature:621316-621427:-1:exon
so has part: feature:620358-620419:-1:exon
so has part: feature:616557-616749:-1:exon
so has part: feature:616240-616368:-1:exon
so has part: feature:615564-615669:-1:exon
so has part: feature:615329-615460:-1:exon
so has part: feature:614116-614239:-1:exon
so has part: feature:610974-611176:-1:exon
so has part: feature:610635-610777:-1:exon
so has part: feature:609807-610258:-1:exon

XP_010715432.2
type: Protein
SIO_000068: ncbiprotein

position:609807:-1
position: 609807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744161:-1
position: 744161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:743319-744161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:721091-721185:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:717267-717329:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713205-713304:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710577-710633:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:707443-707540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:704920-705046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698581-698670:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:681927-682043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:675020-675154:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:659723-659844:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:658465-658606:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:657564-657759:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:653119-653238:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:649285-649360:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:645213-645356:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:644421-644460:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:643196-643318:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:639666-639746:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:638703-638813:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:637329-637451:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:636869-637018:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:636314-636624:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:633691-635357:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:632049-632130:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:631325-631537:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:626350-626462:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:625921-626078:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:624169-624392:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:623566-623682:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:622944-623132:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:622027-622074:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:621316-621427:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:620358-620419:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:616557-616749:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:616240-616368:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:615564-615669:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:615329-615460:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:614116-614239:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:610974-611176:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:610635-610777:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:609807-610258:-1:exon

LOC104912748
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912748
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(770616..777345)
location: region:770616-777345:-1
so has part: feature:770616-777345:-1:exon
subclass of: SO_0000011

104912748
type: Gene
SIO_000068: ncbigene

position:770616:-1
position: 770616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777345:-1
position: 777345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770616-777345:-1:exon

LOC104912748
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912748
product: uncharacterized LOC104912748, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004161005.1
SIO_010081: LOC104912748
subclass of: SO_0000673
so part of: LOC104912748
location: complement(join(770616..771503,773393..773457,773826..774071,774880..777345))
location: region:770616-777345:-1
so has part: feature:774880-777345:-1:exon
so has part: feature:773826-774071:-1:exon
so has part: feature:773393-773457:-1:exon
so has part: feature:770616-771503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774880-777345:-1:exon

position:774880:-1
position: 774880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:773826-774071:-1:exon

position:773826:-1
position: 773826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774071:-1
position: 774071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:773393-773457:-1:exon

position:773393:-1
position: 773393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773457:-1
position: 773457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:770616-771503:-1:exon

position:771503:-1
position: 771503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912748
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912748
product: uncharacterized LOC104912748, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_794859.3
SIO_010081: LOC104912748
subclass of: SO_0000673
so part of: LOC104912748
location: complement(join(771715..771838,773393..773457,773826..774071,774880..777345))
location: region:771715-777345:-1
so has part: feature:774880-777345:-1:exon
so has part: feature:773826-774071:-1:exon
so has part: feature:773393-773457:-1:exon
so has part: feature:771715-771838:-1:exon

position:771715:-1
position: 771715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774880-777345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:773826-774071:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:773393-773457:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:771715-771838:-1:exon

position:771838:-1
position: 771838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SENP8
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SENP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 777520..780588
location: region:777520-780588:1
so has part: feature:777520-780588:1:exon
subclass of: SO_0000010

100541415
type: Gene
SIO_000068: ncbigene

position:777520:1
position: 777520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:780588:1
position: 780588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:777520-780588:1:exon

SENP8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SENP8
product: SUMO peptidase family member, NEDD8 specific
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_010717129.3
SIO_010081: SENP8
subclass of: SO_0000673
so part of: SENP8
location: join(777520..778053,778296..780588)
location: region:777520-780588:1
so has part: feature:777520-778053:1:exon
so has part: feature:778296-780588:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:777520-778053:1:exon

position:778053:1
position: 778053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:778296-780588:1:exon

position:778296:1
position: 778296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SENP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SENP8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sentrin-specific protease 8
translation: MDPVVLSYMDSLLRQSDVALLDPPNWLNDHIIGFAFEYFASDQFQEFSDQICFISPEVAQFIKCALSQEEIAIFLQPLDLFHKKLVFLPINDNSNQAAGGTHWSLLVYFRDKKCFAHYDSHSKCNSVHAKQVAGKLEAFLEKKGGKATFVEEKAPAQQNSYDCGMYVICNTEALCQGYFREQQEPLLQLLTPSYITQKRSEWKALITKLSQK
SIO_010081: SENP8
subclass of: SO_0000673
so part of: SENP8
location: 778339..778977
location: region:778339-778977:1
so has part: feature:778339-778977:1:exon

XP_010715431.1
type: Protein
SIO_000068: ncbiprotein

position:778339:1
position: 778339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:778977:1
position: 778977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778339-778977:1:exon

GRAMD2A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GRAMD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(782365..789094)
location: region:782365-789094:-1
so has part: feature:782365-789094:-1:exon
subclass of: SO_0000010

100544035
type: Gene
SIO_000068: ncbigene

position:782365:-1
position: 782365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789094:-1
position: 789094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:782365-789094:-1:exon

GRAMD2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GRAMD2A
product: GRAM domain containing 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010717230.2
SIO_010081: GRAMD2A
subclass of: SO_0000673
so part of: GRAMD2A
location: complement(join(782365..783276,783362..783469,783542..783641,783844..783997,784567..784629,785500..785571,786354..786452,787177..787280,787352..787424,788780..788850,788992..789094))
location: region:782365-789094:-1
so has part: feature:788992-789094:-1:exon
so has part: feature:788780-788850:-1:exon
so has part: feature:787352-787424:-1:exon
so has part: feature:787177-787280:-1:exon
so has part: feature:786354-786452:-1:exon
so has part: feature:785500-785571:-1:exon
so has part: feature:784567-784629:-1:exon
so has part: feature:783844-783997:-1:exon
so has part: feature:783542-783641:-1:exon
so has part: feature:783362-783469:-1:exon
so has part: feature:782365-783276:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788992-789094:-1:exon

position:788992:-1
position: 788992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:788780-788850:-1:exon

position:788780:-1
position: 788780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788850:-1
position: 788850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:787352-787424:-1:exon

position:787352:-1
position: 787352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787424:-1
position: 787424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:787177-787280:-1:exon

position:787177:-1
position: 787177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787280:-1
position: 787280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:786354-786452:-1:exon

position:786354:-1
position: 786354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786452:-1
position: 786452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:785500-785571:-1:exon

position:785500:-1
position: 785500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785571:-1
position: 785571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:784567-784629:-1:exon

position:784567:-1
position: 784567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784629:-1
position: 784629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:783844-783997:-1:exon

position:783844:-1
position: 783844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783997:-1
position: 783997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:783542-783641:-1:exon

position:783542:-1
position: 783542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783641:-1
position: 783641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:783362-783469:-1:exon

position:783362:-1
position: 783362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783469:-1
position: 783469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:782365-783276:-1:exon

position:783276:-1
position: 783276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GRAMD2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GRAMD2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRAM domain-containing protein 2A
translation: MGLWSTTVHVNKEREHPCPRFLVLLLRDSGVARGAAPSSARSLEALKEEDIKKCQREAAASKYNSQYHKLFKDIPTEESVLKVCSCALQRDILIQGRLYISPNWLCFYANLFGKDIKVVIPVVSVQLIKKHKTARLLPNGLAITTTASRKYIFVSLISRDSVYDVLRRVCTHLQVSSKKSLSLKELTEEPDAMSLEVIVPEGKWRKVSPASLSLSLPDADYQCIHRTSVSSLSAKESFTSEEPLASESAINTEEELEAEQGCVAELRPSDYQLLKIFIVLICLLVVSSSYLAFRIFRLEQQLCSLNRDYLSRGHRR
SIO_010081: GRAMD2A
subclass of: SO_0000673
so part of: GRAMD2A
location: complement(join(783273..783276,783362..783469,783542..783641,783844..783997,784567..784629,785500..785571,786354..786452,787177..787280,787352..787424,788780..788850,788992..789094))
location: region:783273-789094:-1
so has part: feature:788992-789094:-1:exon
so has part: feature:788780-788850:-1:exon
so has part: feature:787352-787424:-1:exon
so has part: feature:787177-787280:-1:exon
so has part: feature:786354-786452:-1:exon
so has part: feature:785500-785571:-1:exon
so has part: feature:784567-784629:-1:exon
so has part: feature:783844-783997:-1:exon
so has part: feature:783542-783641:-1:exon
so has part: feature:783362-783469:-1:exon
so has part: feature:783273-783276:-1:exon

XP_010715532.1
type: Protein
SIO_000068: ncbiprotein

position:783273:-1
position: 783273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788992-789094:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:788780-788850:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:787352-787424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:787177-787280:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:786354-786452:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:785500-785571:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:784567-784629:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:783844-783997:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:783542-783641:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:783362-783469:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:783273-783276:-1:exon

PKM
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(789041..806951)
location: region:789041-806951:-1
so has part: feature:789041-806951:-1:exon
subclass of: SO_0000010

100541568
type: Gene
SIO_000068: ncbigene

position:789041:-1
position: 789041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806951:-1
position: 806951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789041-806951:-1:exon

PKM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PKM
product: pyruvate kinase M1/2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_010717126.3
SIO_010081: PKM
subclass of: SO_0000673
so part of: PKM
location: complement(join(789041..789835,790081..790262,792341..792507,796029..796181,797243..797393,797811..798081,798859..799045,799281..799412,801923..802014,802392..802561,806880..806951))
location: region:789041-806951:-1
so has part: feature:806880-806951:-1:exon
so has part: feature:802392-802561:-1:exon
so has part: feature:801923-802014:-1:exon
so has part: feature:799281-799412:-1:exon
so has part: feature:798859-799045:-1:exon
so has part: feature:797811-798081:-1:exon
so has part: feature:797243-797393:-1:exon
so has part: feature:796029-796181:-1:exon
so has part: feature:792341-792507:-1:exon
so has part: feature:790081-790262:-1:exon
so has part: feature:789041-789835:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806880-806951:-1:exon

position:806880:-1
position: 806880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802392-802561:-1:exon

position:802392:-1
position: 802392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802561:-1
position: 802561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:801923-802014:-1:exon

position:801923:-1
position: 801923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802014:-1
position: 802014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:799281-799412:-1:exon

position:799281:-1
position: 799281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799412:-1
position: 799412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:798859-799045:-1:exon

position:798859:-1
position: 798859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799045:-1
position: 799045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:797811-798081:-1:exon

position:797811:-1
position: 797811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:798081:-1
position: 798081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:797243-797393:-1:exon

position:797243:-1
position: 797243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797393:-1
position: 797393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:796029-796181:-1:exon

position:796029:-1
position: 796029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796181:-1
position: 796181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:792341-792507:-1:exon

position:792341:-1
position: 792341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792507:-1
position: 792507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:790081-790262:-1:exon

position:790081:-1
position: 790081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790262:-1
position: 790262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:789041-789835:-1:exon

position:789835:-1
position: 789835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PKM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PKM
product: pyruvate kinase M1/2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_010717125.3
SIO_010081: PKM
subclass of: SO_0000673
so part of: PKM
location: complement(join(789041..789835,790081..790262,792967..793133,796029..796181,797243..797393,797811..798081,798859..799045,799281..799412,801923..802014,802392..802561,806880..806948))
location: region:789041-806948:-1
so has part: feature:806880-806948:-1:exon
so has part: feature:802392-802561:-1:exon
so has part: feature:801923-802014:-1:exon
so has part: feature:799281-799412:-1:exon
so has part: feature:798859-799045:-1:exon
so has part: feature:797811-798081:-1:exon
so has part: feature:797243-797393:-1:exon
so has part: feature:796029-796181:-1:exon
so has part: feature:792967-793133:-1:exon
so has part: feature:790081-790262:-1:exon
so has part: feature:789041-789835:-1:exon

position:806948:-1
position: 806948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806880-806948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802392-802561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801923-802014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:799281-799412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:798859-799045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797811-798081:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:797243-797393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:796029-796181:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792967-793133:-1:exon

position:792967:-1
position: 792967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:793133:-1
position: 793133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:790081-790262:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789041-789835:-1:exon

PKM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PKM
product: pyruvate kinase M1/2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 104 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 113 samples with support for all annotated introns
transcript id: XM_010717128.3
SIO_010081: PKM
subclass of: SO_0000673
so part of: PKM
location: complement(join(789569..789835,790081..790262,792967..793133,796029..796181,797243..797393,797811..798081,798859..799045,799281..799412,801923..802014,802392..802561,806493..806603))
location: region:789569-806603:-1
so has part: feature:806493-806603:-1:exon
so has part: feature:802392-802561:-1:exon
so has part: feature:801923-802014:-1:exon
so has part: feature:799281-799412:-1:exon
so has part: feature:798859-799045:-1:exon
so has part: feature:797811-798081:-1:exon
so has part: feature:797243-797393:-1:exon
so has part: feature:796029-796181:-1:exon
so has part: feature:792967-793133:-1:exon
so has part: feature:790081-790262:-1:exon
so has part: feature:789569-789835:-1:exon

position:789569:-1
position: 789569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806603:-1
position: 806603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806493-806603:-1:exon

position:806493:-1
position: 806493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802392-802561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801923-802014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:799281-799412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:798859-799045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797811-798081:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:797243-797393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:796029-796181:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792967-793133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790081-790262:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789569-789835:-1:exon

PKM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PKM
product: pyruvate kinase M1/2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_019619306.2
SIO_010081: PKM
subclass of: SO_0000673
so part of: PKM
location: complement(join(789569..789835,790081..790262,792967..793133,796029..796181,797243..797393,797811..798081,798859..799045,799281..799412,801923..802014,802392..802561,802771..802830,806493..806564))
location: region:789569-806564:-1
so has part: feature:806493-806564:-1:exon
so has part: feature:802771-802830:-1:exon
so has part: feature:802392-802561:-1:exon
so has part: feature:801923-802014:-1:exon
so has part: feature:799281-799412:-1:exon
so has part: feature:798859-799045:-1:exon
so has part: feature:797811-798081:-1:exon
so has part: feature:797243-797393:-1:exon
so has part: feature:796029-796181:-1:exon
so has part: feature:792967-793133:-1:exon
so has part: feature:790081-790262:-1:exon
so has part: feature:789569-789835:-1:exon

position:806564:-1
position: 806564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:806493-806564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802771-802830:-1:exon

position:802771:-1
position: 802771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802830:-1
position: 802830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:802392-802561:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:801923-802014:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:799281-799412:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:798859-799045:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:797811-798081:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:797243-797393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:796029-796181:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:792967-793133:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:790081-790262:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:789569-789835:-1:exon

PKM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate kinase PKM isoform X3
translation: MKRSYEGNFCIEGRHRTPVTMSKHHDAGTAFIQTQQLHAAMADTFLEHMCRLDIDSEPTIARNTGIICTIGPASRAVDKLKEMIKSGMNVARLNFSHGTHEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDEHVLWVDYKNLIKVIDVGSKIYVDDGLISLLVKEKGKDFVMTEVENGGMLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQNVDMVFASFIRKAADVHAVRKVLGEKGKHIKIISKIENHEGVRRFDEIMEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPIICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHAIAREAEAAMFHRQQFEEILRHSVHHRDPADAMAAGAVEASFKCLAAALIVMTESGRSAHLVSRYRPRAPIIAVTRNDQTARQAHLYRGVFPVLCKQPAHDAWAEDVDLRVNLGMNVGKARGFFKTGDLVIVLTGWRPGSGYTNTMRVVPVP
SIO_010081: PKM
subclass of: SO_0000673
so part of: PKM
location: complement(join(789729..789835,790081..790262,792967..793133,796029..796181,797243..797393,797811..798081,798859..799045,799281..799412,801923..802014,802392..802561,802771..802811))
location: region:789729-802811:-1
so has part: feature:802771-802811:-1:exon
so has part: feature:802392-802561:-1:exon
so has part: feature:801923-802014:-1:exon
so has part: feature:799281-799412:-1:exon
so has part: feature:798859-799045:-1:exon
so has part: feature:797811-798081:-1:exon
so has part: feature:797243-797393:-1:exon
so has part: feature:796029-796181:-1:exon
so has part: feature:792967-793133:-1:exon
so has part: feature:790081-790262:-1:exon
so has part: feature:789729-789835:-1:exon

XP_019474851.1
type: Protein
SIO_000068: ncbiprotein

position:789729:-1
position: 789729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:802811:-1
position: 802811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802771-802811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802392-802561:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:801923-802014:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:799281-799412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:798859-799045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797811-798081:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:797243-797393:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:796029-796181:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:792967-793133:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:790081-790262:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:789729-789835:-1:exon

PKM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate kinase PKM isoform X2
translation: MSKHHDAGTAFIQTQQLHAAMADTFLEHMCRLDIDSEPTIARNTGIICTIGPASRAVDKLKEMIKSGMNVARLNFSHGTHEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDEHVLWVDYKNLIKVIDVGSKIYVDDGLISLLVKEKGKDFVMTEVENGGMLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQNVDMVFASFIRKAADVHAVRKVLGEKGKHIKIISKIENHEGVRRFDEIMEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPIICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHAIAREAEAAIFHRQLFEELRRLTPLNCDPTEAAAVGAVEASFKCCSGAIIVLTKSGRSAHLVSRYRPRAPIIAVTRNDQTARQAHLYRGVFPVLCKQPAHDAWAEDVDLRVNLGMNVGKARGFFKTGDLVIVLTGWRPGSGYTNTMRVVPVP
SIO_010081: PKM
subclass of: SO_0000673
so part of: PKM
location: complement(join(789729..789835,790081..790262,792341..792507,796029..796181,797243..797393,797811..798081,798859..799045,799281..799412,801923..802014,802392..802542))
location: region:789729-802542:-1
so has part: feature:802392-802542:-1:exon
so has part: feature:801923-802014:-1:exon
so has part: feature:799281-799412:-1:exon
so has part: feature:798859-799045:-1:exon
so has part: feature:797811-798081:-1:exon
so has part: feature:797243-797393:-1:exon
so has part: feature:796029-796181:-1:exon
so has part: feature:792341-792507:-1:exon
so has part: feature:790081-790262:-1:exon
so has part: feature:789729-789835:-1:exon

XP_010715428.2
type: Protein
SIO_000068: ncbiprotein

position:802542:-1
position: 802542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802392-802542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801923-802014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:799281-799412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798859-799045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797811-798081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797243-797393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:796029-796181:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:792341-792507:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:790081-790262:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:789729-789835:-1:exon

PKM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate kinase PKM isoform X1
translation: MSKHHDAGTAFIQTQQLHAAMADTFLEHMCRLDIDSEPTIARNTGIICTIGPASRAVDKLKEMIKSGMNVARLNFSHGTHEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDEHVLWVDYKNLIKVIDVGSKIYVDDGLISLLVKEKGKDFVMTEVENGGMLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQNVDMVFASFIRKAADVHAVRKVLGEKGKHIKIISKIENHEGVRRFDEIMEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPIICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHAIAREAEAAMFHRQQFEEILRHSVHHRDPADAMAAGAVEASFKCLAAALIVMTESGRSAHLVSRYRPRAPIIAVTRNDQTARQAHLYRGVFPVLCKQPAHDAWAEDVDLRVNLGMNVGKARGFFKTGDLVIVLTGWRPGSGYTNTMRVVPVP
SIO_010081: PKM
subclass of: SO_0000673
so part of: PKM
location: complement(join(789729..789835,790081..790262,792967..793133,796029..796181,797243..797393,797811..798081,798859..799045,799281..799412,801923..802014,802392..802542))
location: region:789729-802542:-1
so has part: feature:802392-802542:-1:exon
so has part: feature:801923-802014:-1:exon
so has part: feature:799281-799412:-1:exon
so has part: feature:798859-799045:-1:exon
so has part: feature:797811-798081:-1:exon
so has part: feature:797243-797393:-1:exon
so has part: feature:796029-796181:-1:exon
so has part: feature:792967-793133:-1:exon
so has part: feature:790081-790262:-1:exon
so has part: feature:789729-789835:-1:exon

XP_010715427.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:802392-802542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801923-802014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:799281-799412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798859-799045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797811-798081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797243-797393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:796029-796181:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:792967-793133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:790081-790262:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:789729-789835:-1:exon

PKM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PKM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate kinase PKM isoform X1
translation: MSKHHDAGTAFIQTQQLHAAMADTFLEHMCRLDIDSEPTIARNTGIICTIGPASRAVDKLKEMIKSGMNVARLNFSHGTHEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDEHVLWVDYKNLIKVIDVGSKIYVDDGLISLLVKEKGKDFVMTEVENGGMLGSKKGVNLPGAAVDLPAVSEKDIQDLKFGVEQNVDMVFASFIRKAADVHAVRKVLGEKGKHIKIISKIENHEGVRRFDEIMEASDGIMVARGDLGIEIPAEKVFLAQKMMIGRCNRAGKPIICATQMLESMIKKPRPTRAEGSDVANAVLDGADCIMLSGETAKGDYPLEAVRMQHAIAREAEAAMFHRQQFEEILRHSVHHRDPADAMAAGAVEASFKCLAAALIVMTESGRSAHLVSRYRPRAPIIAVTRNDQTARQAHLYRGVFPVLCKQPAHDAWAEDVDLRVNLGMNVGKARGFFKTGDLVIVLTGWRPGSGYTNTMRVVPVP
SIO_010081: PKM
subclass of: SO_0000673
so part of: PKM
location: complement(join(789729..789835,790081..790262,792967..793133,796029..796181,797243..797393,797811..798081,798859..799045,799281..799412,801923..802014,802392..802542))
location: region:789729-802542:-1
so has part: feature:802392-802542:-1:exon
so has part: feature:801923-802014:-1:exon
so has part: feature:799281-799412:-1:exon
so has part: feature:798859-799045:-1:exon
so has part: feature:797811-798081:-1:exon
so has part: feature:797243-797393:-1:exon
so has part: feature:796029-796181:-1:exon
so has part: feature:792967-793133:-1:exon
so has part: feature:790081-790262:-1:exon
so has part: feature:789729-789835:-1:exon

XP_010715430.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:802392-802542:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:801923-802014:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:799281-799412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:798859-799045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:797811-798081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:797243-797393:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:796029-796181:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:792967-793133:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:790081-790262:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:789729-789835:-1:exon

PARP6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PARP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 807891..816698
location: region:807891-816698:1
so has part: feature:807891-816698:1:exon
subclass of: SO_0000010

100544191
type: Gene
SIO_000068: ncbigene

position:807891:1
position: 807891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816698:1
position: 816698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807891-816698:1:exon

PARP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PARP6
product: poly(ADP-ribose) polymerase family member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555199.1
SIO_010081: PARP6
subclass of: SO_0000673
so part of: PARP6
location: join(807891..807915,808146..808231,810853..810930,811028..811122,811242..811302,811392..811482,811559..811625,812000..812149,812349..812526,812716..812769,812853..812948,813026..813118,813196..813321,813401..813466,813583..813650,814430..814478,814903..815015,815106..815178,815314..815383,815848..815927,815997..816060,816160..816244,816312..816698)
location: region:807891-816698:1
so has part: feature:807891-807915:1:exon
so has part: feature:808146-808231:1:exon
so has part: feature:810853-810930:1:exon
so has part: feature:811028-811122:1:exon
so has part: feature:811242-811302:1:exon
so has part: feature:811392-811482:1:exon
so has part: feature:811559-811625:1:exon
so has part: feature:812000-812149:1:exon
so has part: feature:812349-812526:1:exon
so has part: feature:812716-812769:1:exon
so has part: feature:812853-812948:1:exon
so has part: feature:813026-813118:1:exon
so has part: feature:813196-813321:1:exon
so has part: feature:813401-813466:1:exon
so has part: feature:813583-813650:1:exon
so has part: feature:814430-814478:1:exon
so has part: feature:814903-815015:1:exon
so has part: feature:815106-815178:1:exon
so has part: feature:815314-815383:1:exon
so has part: feature:815848-815927:1:exon
so has part: feature:815997-816060:1:exon
so has part: feature:816160-816244:1:exon
so has part: feature:816312-816698:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:807891-807915:1:exon

position:807915:1
position: 807915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:808146-808231:1:exon

position:808146:1
position: 808146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808231:1
position: 808231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:810853-810930:1:exon

position:810853:1
position: 810853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:810930:1
position: 810930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:811028-811122:1:exon

position:811028:1
position: 811028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811122:1
position: 811122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:811242-811302:1:exon

position:811242:1
position: 811242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811302:1
position: 811302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:811392-811482:1:exon

position:811392:1
position: 811392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811482:1
position: 811482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:811559-811625:1:exon

position:811559:1
position: 811559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:811625:1
position: 811625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:812000-812149:1:exon

position:812000:1
position: 812000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812149:1
position: 812149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:812349-812526:1:exon

position:812349:1
position: 812349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812526:1
position: 812526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:812716-812769:1:exon

position:812716:1
position: 812716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812769:1
position: 812769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:812853-812948:1:exon

position:812853:1
position: 812853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812948:1
position: 812948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:813026-813118:1:exon

position:813026:1
position: 813026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813118:1
position: 813118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:813196-813321:1:exon

position:813196:1
position: 813196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813321:1
position: 813321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:813401-813466:1:exon

position:813401:1
position: 813401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813466:1
position: 813466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:813583-813650:1:exon

position:813583:1
position: 813583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813650:1
position: 813650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:814430-814478:1:exon

position:814430:1
position: 814430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814478:1
position: 814478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:814903-815015:1:exon

position:814903:1
position: 814903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815015:1
position: 815015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:815106-815178:1:exon

position:815106:1
position: 815106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815178:1
position: 815178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:815314-815383:1:exon

position:815314:1
position: 815314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815383:1
position: 815383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:815848-815927:1:exon

position:815848:1
position: 815848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815927:1
position: 815927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:815997-816060:1:exon

position:815997:1
position: 815997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816060:1
position: 816060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:816160-816244:1:exon

position:816160:1
position: 816160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816244:1
position: 816244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:816312-816698:1:exon

position:816312:1
position: 816312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PARP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PARP6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein mono-ADP-ribosyltransferase PARP6
translation: MGTQRGVTGHGDRKWAPGDRVRGTPSEDCRDPTRRRRDLKGQYWTDDDSDGDNESEEFLYGVQGTCAADLYRHPQLDADIEAVKEIYSENAVSVREYGTIDDVDIDLHVNISFLDEEVATAWKVLRTEPIVLRLRFSLSQYLDGPEPSIEVFQPSNKEGFGLGLQLKKILGMFTSQQWKHLSNDFLKTQQEKRHSWFKTSGTIKKFRAGLSIFSPIPKSPSFPVIPDSVLKGKLGAPEVRVNRLMNRSVSCTVKNPKGEVFGYTPSTQAGVAPFNILVGGHCKNVPTLEYGFLVQIMKYAEQRIPTLNEYCVVCDEQHVFQNGSMLKPAVCTRELCVFSFYTLGVMSGAAEEVATGAEVVDLLVAMCRAALESPRKSIIFEPYPSVVDPNDPKTLAFNPKKKNYERLQKALDSVMSIREMTQGSYLEIKKQMDKLDPLAHPLLQWIISSNRSHIVKLPLSRQLKFMHTSHQFLLLSSPPAKEARFRTAKKLYGSTFAFHGSHIENWHSILRNGLVNASYTKLQLHGAAYGKGIYLSPISSISFGYSGMGKGQHRMPSKDELVQRYNRMNTIPQTRSIQSRFLQSRNLNCIALCEVITSKDLQKHGNIWVCPVSDHVCTRFFFVYEDGQVGDANINTQDPKIQKEIMRVIGTQVYTN
SIO_010081: PARP6
subclass of: SO_0000673
so part of: PARP6
location: join(807891..807915,808146..808231,810853..810930,811028..811122,811242..811302,811392..811482,811559..811625,812000..812149,812349..812526,812716..812769,812853..812948,813026..813118,813196..813321,813401..813466,813583..813650,814430..814478,814903..815015,815106..815178,815314..815383,815848..815927,815997..816060,816160..816244,816312..816414)
location: region:807891-816414:1
so has part: feature:807891-807915:1:exon
so has part: feature:808146-808231:1:exon
so has part: feature:810853-810930:1:exon
so has part: feature:811028-811122:1:exon
so has part: feature:811242-811302:1:exon
so has part: feature:811392-811482:1:exon
so has part: feature:811559-811625:1:exon
so has part: feature:812000-812149:1:exon
so has part: feature:812349-812526:1:exon
so has part: feature:812716-812769:1:exon
so has part: feature:812853-812948:1:exon
so has part: feature:813026-813118:1:exon
so has part: feature:813196-813321:1:exon
so has part: feature:813401-813466:1:exon
so has part: feature:813583-813650:1:exon
so has part: feature:814430-814478:1:exon
so has part: feature:814903-815015:1:exon
so has part: feature:815106-815178:1:exon
so has part: feature:815314-815383:1:exon
so has part: feature:815848-815927:1:exon
so has part: feature:815997-816060:1:exon
so has part: feature:816160-816244:1:exon
so has part: feature:816312-816414:1:exon

XP_031411059.1
type: Protein
SIO_000068: ncbiprotein

position:816414:1
position: 816414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:807891-807915:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:808146-808231:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:810853-810930:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:811028-811122:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:811242-811302:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:811392-811482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:811559-811625:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:812000-812149:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:812349-812526:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:812716-812769:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:812853-812948:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:813026-813118:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:813196-813321:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:813401-813466:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:813583-813650:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:814430-814478:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:814903-815015:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:815106-815178:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:815314-815383:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:815848-815927:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:815997-816060:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:816160-816244:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:816312-816414:1:exon

CELF6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CELF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(819151..829383)
location: region:819151-829383:-1
so has part: feature:819151-829383:-1:exon
subclass of: SO_0000010

100539581
type: Gene
SIO_000068: ncbigene

position:819151:-1
position: 819151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829383:-1
position: 829383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819151-829383:-1:exon

CELF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CELF6
product: CUGBP Elav-like family member 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_019619317.2
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819151..819273,819413..819567,820180..820323,820411..820491,821147..821209,821311..821460,821548..821692,821824..821967,822365..822444,822530..822655,823633..823681,827179..827261,829204..829383))
location: region:819151-829383:-1
so has part: feature:829204-829383:-1:exon
so has part: feature:827179-827261:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822655:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:821147-821209:-1:exon
so has part: feature:820411-820491:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819413-819567:-1:exon
so has part: feature:819151-819273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829204-829383:-1:exon

position:829204:-1
position: 829204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:827179-827261:-1:exon

position:827179:-1
position: 827179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:827261:-1
position: 827261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:823633-823681:-1:exon

position:823633:-1
position: 823633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823681:-1
position: 823681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:822530-822655:-1:exon

position:822530:-1
position: 822530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822655:-1
position: 822655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:822365-822444:-1:exon

position:822365:-1
position: 822365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822444:-1
position: 822444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:821824-821967:-1:exon

position:821824:-1
position: 821824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821967:-1
position: 821967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:821548-821692:-1:exon

position:821548:-1
position: 821548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821692:-1
position: 821692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:821311-821460:-1:exon

position:821311:-1
position: 821311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821460:-1
position: 821460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:821147-821209:-1:exon

position:821147:-1
position: 821147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:821209:-1
position: 821209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:820411-820491:-1:exon

position:820411:-1
position: 820411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820491:-1
position: 820491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:820180-820323:-1:exon

position:820180:-1
position: 820180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:820323:-1
position: 820323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:819413-819567:-1:exon

position:819413:-1
position: 819413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:819567:-1
position: 819567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:819151-819273:-1:exon

position:819273:-1
position: 819273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CELF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CELF6
product: CUGBP Elav-like family member 6, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031555190.1
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819151..819273,819413..819567,820180..820323,820411..820488,821311..821460,821548..821692,821824..821967,822365..822444,822530..822658,823633..823681,827179..827261,829204..829383))
location: region:819151-829383:-1
so has part: feature:829204-829383:-1:exon
so has part: feature:827179-827261:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822658:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:820411-820488:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819413-819567:-1:exon
so has part: feature:819151-819273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829204-829383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827179-827261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822530-822658:-1:exon

position:822658:-1
position: 822658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820411-820488:-1:exon

position:820488:-1
position: 820488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819413-819567:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819151-819273:-1:exon

CELF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CELF6
product: CUGBP Elav-like family member 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 84 samples with support for all annotated introns
transcript id: XM_010717124.3
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819151..819273,819413..819567,820180..820323,820411..820491,821311..821460,821548..821692,821824..821967,822365..822444,822530..822658,823633..823681,827179..827261,829204..829383))
location: region:819151-829383:-1
so has part: feature:829204-829383:-1:exon
so has part: feature:827179-827261:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822658:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:820411-820491:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819413-819567:-1:exon
so has part: feature:819151-819273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829204-829383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827179-827261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822530-822658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820411-820491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819413-819567:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819151-819273:-1:exon

CELF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CELF6
product: CUGBP Elav-like family member 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_010717123.3
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819151..819273,819413..819567,820180..820323,820411..820488,821147..821209,821311..821460,821548..821692,821824..821967,822365..822444,822530..822658,823633..823681,827179..827261,829204..829383))
location: region:819151-829383:-1
so has part: feature:829204-829383:-1:exon
so has part: feature:827179-827261:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822658:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:821147-821209:-1:exon
so has part: feature:820411-820488:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819413-819567:-1:exon
so has part: feature:819151-819273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829204-829383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827179-827261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822530-822658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:821147-821209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820411-820488:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819413-819567:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819151-819273:-1:exon

CELF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CELF6
product: CUGBP Elav-like family member 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_010717121.3
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819151..819273,819413..819567,820180..820323,820411..820491,821147..821209,821311..821460,821548..821692,821824..821967,822365..822444,822530..822658,823633..823681,827179..827261,829204..829383))
location: region:819151-829383:-1
so has part: feature:829204-829383:-1:exon
so has part: feature:827179-827261:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822658:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:821147-821209:-1:exon
so has part: feature:820411-820491:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819413-819567:-1:exon
so has part: feature:819151-819273:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829204-829383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827179-827261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822530-822658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:821147-821209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820411-820491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819413-819567:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:819151-819273:-1:exon

CELF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CELF6
product: CUGBP Elav-like family member 6, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019619319.2
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819151..819273,819413..819567,820180..820323,820411..820491,821147..821209,821311..821460,821548..821692,821824..821967,822365..822444,822530..822655,823633..823681,824062..824191))
location: region:819151-824191:-1
so has part: feature:824062-824191:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822655:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:821147-821209:-1:exon
so has part: feature:820411-820491:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819413-819567:-1:exon
so has part: feature:819151-819273:-1:exon

position:824191:-1
position: 824191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824062-824191:-1:exon

position:824062:-1
position: 824062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822530-822655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821147-821209:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820411-820491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819413-819567:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819151-819273:-1:exon

CELF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CELF6
product: CUGBP Elav-like family member 6, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019619318.2
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819151..819273,819413..819567,820180..820323,820411..820491,821147..821209,821311..821460,821548..821692,821824..821967,822365..822444,822530..822658,823633..823681,824062..824190))
location: region:819151-824190:-1
so has part: feature:824062-824190:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822658:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:821147-821209:-1:exon
so has part: feature:820411-820491:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819413-819567:-1:exon
so has part: feature:819151-819273:-1:exon

position:824190:-1
position: 824190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824062-824190:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822530-822658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821147-821209:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820411-820491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819413-819567:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819151-819273:-1:exon

CELF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CELF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 6 isoform X3
translation: MKDHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSEGRGDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFNPMTIQFGAYGAYTQAIMQQQAALMAAAQGTCLNPMAAIAAAQMQQMAAFNVSGLVAAPLTPSSGTSTPPGISTAPVPSIATPIGVNGFSPLPPQTNGQPTSETIYTNGIHPYPAQSPTVADPLQQAYAGMQHYAAAYPTAYAPISQAFPQQAPIIPQQQREGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819440..819567,820180..820323,820411..820491,821147..821209,821311..821460,821548..821692,821824..821967,822365..822444,822530..822655,823633..823681,827179..827261,829204..829348))
location: region:819440-829348:-1
so has part: feature:829204-829348:-1:exon
so has part: feature:827179-827261:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822655:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:821147-821209:-1:exon
so has part: feature:820411-820491:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819440-819567:-1:exon

XP_019474862.1
type: Protein
SIO_000068: ncbiprotein

position:819440:-1
position: 819440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829348:-1
position: 829348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829204-829348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827179-827261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822530-822655:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:821147-821209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820411-820491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819440-819567:-1:exon

CELF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CELF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 6 isoform X5
translation: MKDHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFNPMTIQFGAYGAYTQAIMQQQAALMAAAQGTCLNPMAAIAAAQMQQMAAFNVSGLVAAPLTPSSGTSTPPGISTAPVPSIATPIGVNGFSPLPPQTNGQPTSETIYTNGIHPYPAYPTAYAPISQAFPQQAPIIPQQQREGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819440..819567,820180..820323,820411..820488,821311..821460,821548..821692,821824..821967,822365..822444,822530..822658,823633..823681,827179..827261,829204..829348))
location: region:819440-829348:-1
so has part: feature:829204-829348:-1:exon
so has part: feature:827179-827261:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822658:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:820411-820488:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819440-819567:-1:exon

XP_031411050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:829204-829348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827179-827261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822530-822658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820411-820488:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819440-819567:-1:exon

CELF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CELF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 6 isoform X4
translation: MKDHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFNPMTIQFGAYGAYTQAIMQQQAALMAAAQGTCLNPMAAIAAAQMQQMAAFNVSGLVAAPLTPSSGTSTPPGISTAPVPSIATPIGVNGFSPLPPQTNGQPTSETIYTNGIHPYPAAYPTAYAPISQAFPQQAPIIPQQQREGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819440..819567,820180..820323,820411..820491,821311..821460,821548..821692,821824..821967,822365..822444,822530..822658,823633..823681,827179..827261,829204..829348))
location: region:819440-829348:-1
so has part: feature:829204-829348:-1:exon
so has part: feature:827179-827261:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822658:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:820411-820491:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819440-819567:-1:exon

XP_010715426.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:829204-829348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827179-827261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822530-822658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820411-820491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819440-819567:-1:exon

CELF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CELF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 6 isoform X2
translation: MKDHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFNPMTIQFGAYGAYTQAIMQQQAALMAAAQGTCLNPMAAIAAAQMQQMAAFNVSGLVAAPLTPSSGTSTPPGISTAPVPSIATPIGVNGFSPLPPQTNGQPTSETIYTNGIHPYPAQSPTVADPLQQAYAGMQHYAAYPTAYAPISQAFPQQAPIIPQQQREGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819440..819567,820180..820323,820411..820488,821147..821209,821311..821460,821548..821692,821824..821967,822365..822444,822530..822658,823633..823681,827179..827261,829204..829348))
location: region:819440-829348:-1
so has part: feature:829204-829348:-1:exon
so has part: feature:827179-827261:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822658:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:821147-821209:-1:exon
so has part: feature:820411-820488:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819440-819567:-1:exon

XP_010715425.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:829204-829348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827179-827261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822530-822658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:821147-821209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820411-820488:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819440-819567:-1:exon

CELF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CELF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 6 isoform X1
translation: MKDHDAIKLFVGQIPRNLEESDLKPLFEEFGRIYELTVLKDRFTGMHKGCAFLTYCARDSALKAQSALHEQKTLPGMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFNPMTIQFGAYGAYTQAIMQQQAALMAAAQGTCLNPMAAIAAAQMQQMAAFNVSGLVAAPLTPSSGTSTPPGISTAPVPSIATPIGVNGFSPLPPQTNGQPTSETIYTNGIHPYPAQSPTVADPLQQAYAGMQHYAAAYPTAYAPISQAFPQQAPIIPQQQREGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819440..819567,820180..820323,820411..820491,821147..821209,821311..821460,821548..821692,821824..821967,822365..822444,822530..822658,823633..823681,827179..827261,829204..829348))
location: region:819440-829348:-1
so has part: feature:829204-829348:-1:exon
so has part: feature:827179-827261:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822658:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:821147-821209:-1:exon
so has part: feature:820411-820491:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819440-819567:-1:exon

XP_010715423.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:829204-829348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:827179-827261:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822530-822658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:821147-821209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820411-820491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:819440-819567:-1:exon

CELF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CELF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 6 isoform X7
translation: METAMNRPIQVKPADSEGRGDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFNPMTIQFGAYGAYTQAIMQQQAALMAAAQGTCLNPMAAIAAAQMQQMAAFNVSGLVAAPLTPSSGTSTPPGISTAPVPSIATPIGVNGFSPLPPQTNGQPTSETIYTNGIHPYPAQSPTVADPLQQAYAGMQHYAAAYPTAYAPISQAFPQQAPIIPQQQREGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819440..819567,820180..820323,820411..820491,821147..821209,821311..821460,821548..821692,821824..821967,822365..822444,822530..822655,823633..823681,824062..824073))
location: region:819440-824073:-1
so has part: feature:824062-824073:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822655:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:821147-821209:-1:exon
so has part: feature:820411-820491:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819440-819567:-1:exon

XP_019474864.1
type: Protein
SIO_000068: ncbiprotein

position:824073:-1
position: 824073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824062-824073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822530-822655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821147-821209:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820411-820491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819440-819567:-1:exon

CELF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CELF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 6 isoform X6
translation: METAMNRPIQVKPADSEGRGEDRKLFVGMLGKQQSEDDVRRLFEPFGQIEECTILRGPDGASKGCAFVKYSSHAEAQAAISSLHGSQTMPGASSSLVVKFADTDKERTLRRMHQMAGQLGIFNPMTIQFGAYGAYTQAIMQQQAALMAAAQGTCLNPMAAIAAAQMQQMAAFNVSGLVAAPLTPSSGTSTPPGISTAPVPSIATPIGVNGFSPLPPQTNGQPTSETIYTNGIHPYPAQSPTVADPLQQAYAGMQHYAAAYPTAYAPISQAFPQQAPIIPQQQREGPEGCNLFIYHLPQEFGDAELTQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPTSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF6
subclass of: SO_0000673
so part of: CELF6
location: complement(join(819440..819567,820180..820323,820411..820491,821147..821209,821311..821460,821548..821692,821824..821967,822365..822444,822530..822658,823633..823681,824062..824073))
location: region:819440-824073:-1
so has part: feature:824062-824073:-1:exon
so has part: feature:823633-823681:-1:exon
so has part: feature:822530-822658:-1:exon
so has part: feature:822365-822444:-1:exon
so has part: feature:821824-821967:-1:exon
so has part: feature:821548-821692:-1:exon
so has part: feature:821311-821460:-1:exon
so has part: feature:821147-821209:-1:exon
so has part: feature:820411-820491:-1:exon
so has part: feature:820180-820323:-1:exon
so has part: feature:819440-819567:-1:exon

XP_019474863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:824062-824073:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:823633-823681:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:822530-822658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:822365-822444:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:821824-821967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:821548-821692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:821311-821460:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:821147-821209:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:820411-820491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:820180-820323:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:819440-819567:-1:exon

HEXA
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HEXA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(830318..845860)
location: region:830318-845860:-1
so has part: feature:830318-845860:-1:exon
subclass of: SO_0000010

100544348
type: Gene
SIO_000068: ncbigene

position:830318:-1
position: 830318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845860:-1
position: 845860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:830318-845860:-1:exon

HEXA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HEXA
product: hexosaminidase subunit alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 170 samples with support for all annotated introns
transcript id: XM_010717120.3
SIO_010081: HEXA
subclass of: SO_0000673
so part of: HEXA
location: complement(join(830318..831511,831873..831977,832363..832453,832792..832969,833297..833369,833620..833706,834055..834235,834456..834588,834692..834793,835576..835686,835889..835935,836087..836152,836520..836618,845722..845860))
location: region:830318-845860:-1
so has part: feature:845722-845860:-1:exon
so has part: feature:836520-836618:-1:exon
so has part: feature:836087-836152:-1:exon
so has part: feature:835889-835935:-1:exon
so has part: feature:835576-835686:-1:exon
so has part: feature:834692-834793:-1:exon
so has part: feature:834456-834588:-1:exon
so has part: feature:834055-834235:-1:exon
so has part: feature:833620-833706:-1:exon
so has part: feature:833297-833369:-1:exon
so has part: feature:832792-832969:-1:exon
so has part: feature:832363-832453:-1:exon
so has part: feature:831873-831977:-1:exon
so has part: feature:830318-831511:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:845722-845860:-1:exon

position:845722:-1
position: 845722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:836520-836618:-1:exon

position:836520:-1
position: 836520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836618:-1
position: 836618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:836087-836152:-1:exon

position:836087:-1
position: 836087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836152:-1
position: 836152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:835889-835935:-1:exon

position:835889:-1
position: 835889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835935:-1
position: 835935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:835576-835686:-1:exon

position:835576:-1
position: 835576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:835686:-1
position: 835686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:834692-834793:-1:exon

position:834692:-1
position: 834692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834793:-1
position: 834793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:834456-834588:-1:exon

position:834456:-1
position: 834456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834588:-1
position: 834588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:834055-834235:-1:exon

position:834055:-1
position: 834055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:834235:-1
position: 834235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:833620-833706:-1:exon

position:833620:-1
position: 833620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833706:-1
position: 833706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:833297-833369:-1:exon

position:833297:-1
position: 833297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833369:-1
position: 833369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:832792-832969:-1:exon

position:832792:-1
position: 832792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832969:-1
position: 832969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:832363-832453:-1:exon

position:832363:-1
position: 832363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832453:-1
position: 832453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:831873-831977:-1:exon

position:831873:-1
position: 831873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:831977:-1
position: 831977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:830318-831511:-1:exon

position:831511:-1
position: 831511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HEXA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HEXA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-hexosaminidase subunit alpha
translation: MGHAENKQSWRTSCTELLISVATPGCNGFPNLESKENYKLNISRDSMLLYADAVWGALRGLETFSQLVGRDENGMYYINETEIVDFPRFPHRGLLLDTSRHYLPLKAILETLDVMAYNKLNVFHWHIVDDPSFPYESFTFPELSKQGAFSAMTHVYTASDVQTVIEYARLRGIRVIAEFDTPGHTLSWGPGAPGLLTPCYLGKDPSGTYGPINPIFNSTYQFVTSLFQEISSVFPDYFIHLGGDEVDFTCWKSNPDILVFMKKMGFGEDYTKLESYYIQRLLDIVSSLGKGYMVWQEVFDNGVKVRPDTIIHVWKNNLPYAEEMANVTKAGYRALLSAPWYLNRISYGQDWMAAYQVEPLKFTGSTKQKDLVIGGEACMWGEYVDVTNLTPRLWPRAGAVAERLWSNATVRNLQDAYVRLADFRCELLRRGVQAEPLFTGYCDHEFGGF
SIO_010081: HEXA
subclass of: SO_0000673
so part of: HEXA
location: complement(join(831448..831511,831873..831977,832363..832453,832792..832969,833297..833369,833620..833706,834055..834235,834456..834588,834692..834793,835576..835686,835889..835935,836087..836152,836520..836618,845722..845734))
location: region:831448-845734:-1
so has part: feature:845722-845734:-1:exon
so has part: feature:836520-836618:-1:exon
so has part: feature:836087-836152:-1:exon
so has part: feature:835889-835935:-1:exon
so has part: feature:835576-835686:-1:exon
so has part: feature:834692-834793:-1:exon
so has part: feature:834456-834588:-1:exon
so has part: feature:834055-834235:-1:exon
so has part: feature:833620-833706:-1:exon
so has part: feature:833297-833369:-1:exon
so has part: feature:832792-832969:-1:exon
so has part: feature:832363-832453:-1:exon
so has part: feature:831873-831977:-1:exon
so has part: feature:831448-831511:-1:exon

XP_010715422.1
type: Protein
SIO_000068: ncbiprotein

position:831448:-1
position: 831448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845734:-1
position: 845734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845722-845734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:836520-836618:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:836087-836152:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:835889-835935:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:835576-835686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:834692-834793:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:834456-834588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:834055-834235:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:833620-833706:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:833297-833369:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:832792-832969:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:832363-832453:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:831873-831977:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:831448-831511:-1:exon

ARIH1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ARIH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 853858..894317
location: region:853858-894317:1
so has part: feature:853858-894317:1:exon
subclass of: SO_0000010

100541719
type: Gene
SIO_000068: ncbigene

position:853858:1
position: 853858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:894317:1
position: 894317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853858-894317:1:exon

ARIH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ARIH1
product: ariadne RBR E3 ubiquitin protein ligase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010717119.3
SIO_010081: ARIH1
subclass of: SO_0000673
so part of: ARIH1
location: join(853858..853905,865207..865274,872119..872263,875979..876071,876466..876521,880103..880169,880732..880838,881260..881302,882575..882646,888633..888763,888860..888917,890174..890434,891245..891357,893530..894317)
location: region:853858-894317:1
so has part: feature:853858-853905:1:exon
so has part: feature:865207-865274:1:exon
so has part: feature:872119-872263:1:exon
so has part: feature:875979-876071:1:exon
so has part: feature:876466-876521:1:exon
so has part: feature:880103-880169:1:exon
so has part: feature:880732-880838:1:exon
so has part: feature:881260-881302:1:exon
so has part: feature:882575-882646:1:exon
so has part: feature:888633-888763:1:exon
so has part: feature:888860-888917:1:exon
so has part: feature:890174-890434:1:exon
so has part: feature:891245-891357:1:exon
so has part: feature:893530-894317:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:853858-853905:1:exon

position:853905:1
position: 853905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:865207-865274:1:exon

position:865207:1
position: 865207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865274:1
position: 865274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:872119-872263:1:exon

position:872119:1
position: 872119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:872263:1
position: 872263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:875979-876071:1:exon

position:875979:1
position: 875979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876071:1
position: 876071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:876466-876521:1:exon

position:876466:1
position: 876466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:876521:1
position: 876521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:880103-880169:1:exon

position:880103:1
position: 880103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880169:1
position: 880169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:880732-880838:1:exon

position:880732:1
position: 880732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:880838:1
position: 880838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:881260-881302:1:exon

position:881260:1
position: 881260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:881302:1
position: 881302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:882575-882646:1:exon

position:882575:1
position: 882575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882646:1
position: 882646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:888633-888763:1:exon

position:888633:1
position: 888633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888763:1
position: 888763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:888860-888917:1:exon

position:888860:1
position: 888860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888917:1
position: 888917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:890174-890434:1:exon

position:890174:1
position: 890174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890434:1
position: 890434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:891245-891357:1:exon

position:891245:1
position: 891245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:891357:1
position: 891357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:893530-894317:1:exon

position:893530:1
position: 893530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARIH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ARIH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase ARIH1
translation: MRMKQSEVLLWVISFQNPATITRILLSHFNWDKEKLMERYFDGNLEKLFAECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKWLKKWIKKCDDDSETSNWIAANTKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHGSAWYNCNRYNEDDAKAARDAQERSRAALQRYLFYCNRYMNHMQSLRFEHKLYAQVKQKMEEMQQHNMSWIEVQFLKKAVDVLCQCRATLMYTYVFAFYLKKNNQSIIFENNQADLENATEVLSGYLERDISQDSLQDIKQKVQDKYRYCESRRRVLLQHVHEGYEKDLWEYIED
SIO_010081: ARIH1
subclass of: SO_0000673
so part of: ARIH1
location: join(853858..853905,865207..865274,872119..872263,875979..876071,876466..876521,880103..880169,880732..880838,881260..881302,882575..882646,888633..888763,888860..888917,890174..890434,891245..891357,893530..893614)
location: region:853858-893614:1
so has part: feature:853858-853905:1:exon
so has part: feature:865207-865274:1:exon
so has part: feature:872119-872263:1:exon
so has part: feature:875979-876071:1:exon
so has part: feature:876466-876521:1:exon
so has part: feature:880103-880169:1:exon
so has part: feature:880732-880838:1:exon
so has part: feature:881260-881302:1:exon
so has part: feature:882575-882646:1:exon
so has part: feature:888633-888763:1:exon
so has part: feature:888860-888917:1:exon
so has part: feature:890174-890434:1:exon
so has part: feature:891245-891357:1:exon
so has part: feature:893530-893614:1:exon

XP_010715421.3
type: Protein
SIO_000068: ncbiprotein

position:893614:1
position: 893614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:853858-853905:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:865207-865274:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:872119-872263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:875979-876071:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:876466-876521:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:880103-880169:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:880732-880838:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:881260-881302:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:882575-882646:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:888633-888763:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:888860-888917:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:890174-890434:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:891245-891357:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:893530-893614:1:exon

BBS4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: BBS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 899683..928857
location: region:899683-928857:1
so has part: feature:899683-928857:1:exon
subclass of: SO_0000010

104912758
type: Gene
SIO_000068: ncbigene

position:899683:1
position: 899683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:928857:1
position: 928857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899683-928857:1:exon

BBS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: BBS4
product: Bardet-Biedl syndrome 4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555200.1
SIO_010081: BBS4
subclass of: SO_0000673
so part of: BBS4
location: join(899683..899724,900125..900218,909888..909967,913406..913469,914214..914325,914948..915020,916868..916921,918101..918228,920032..920086,920810..920878,921744..921896,922010..922181,922378..922448,924962..925103,925477..925687,926565..928857)
location: region:899683-928857:1
so has part: feature:899683-899724:1:exon
so has part: feature:900125-900218:1:exon
so has part: feature:909888-909967:1:exon
so has part: feature:913406-913469:1:exon
so has part: feature:914214-914325:1:exon
so has part: feature:914948-915020:1:exon
so has part: feature:916868-916921:1:exon
so has part: feature:918101-918228:1:exon
so has part: feature:920032-920086:1:exon
so has part: feature:920810-920878:1:exon
so has part: feature:921744-921896:1:exon
so has part: feature:922010-922181:1:exon
so has part: feature:922378-922448:1:exon
so has part: feature:924962-925103:1:exon
so has part: feature:925477-925687:1:exon
so has part: feature:926565-928857:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899683-899724:1:exon

position:899724:1
position: 899724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:900125-900218:1:exon

position:900125:1
position: 900125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:900218:1
position: 900218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:909888-909967:1:exon

position:909888:1
position: 909888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909967:1
position: 909967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:913406-913469:1:exon

position:913406:1
position: 913406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913469:1
position: 913469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:914214-914325:1:exon

position:914214:1
position: 914214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914325:1
position: 914325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:914948-915020:1:exon

position:914948:1
position: 914948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915020:1
position: 915020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:916868-916921:1:exon

position:916868:1
position: 916868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916921:1
position: 916921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:918101-918228:1:exon

position:918101:1
position: 918101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:918228:1
position: 918228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:920032-920086:1:exon

position:920032:1
position: 920032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920086:1
position: 920086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:920810-920878:1:exon

position:920810:1
position: 920810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:920878:1
position: 920878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:921744-921896:1:exon

position:921744:1
position: 921744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:921896:1
position: 921896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:922010-922181:1:exon

position:922010:1
position: 922010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922181:1
position: 922181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:922378-922448:1:exon

position:922378:1
position: 922378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:922448:1
position: 922448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:924962-925103:1:exon

position:924962:1
position: 924962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925103:1
position: 925103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:925477-925687:1:exon

position:925477:1
position: 925477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:925687:1
position: 925687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:926565-928857:1:exon

position:926565:1
position: 926565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BBS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: BBS4
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: Bardet-Biedl syndrome 4 protein
translation: MVATHLCAHPGHGQQLIASHQSTAAQPAAVRLLQGSGGFVSFAVLVPEIPMLERRNWFIYLLYVHREYDECKAVIKEQLQESHGRCEYAVYVQALIFRLEGKIQESLELFQTCSILNPRSADNLKQVARSLFLLGKHKAAIEVYNEAAKLDEKDWEISHNVGVCYMYLKHFNKARDQLNNALKMNRHDLTYMMLGKIHLLEGETEKAIEVYKKAIEFSPENTDLLTKLGLIYLQLGDYQKAFEHLGKALTYDQGNYKATLAAGSMMQAHGDYEVALSKYRAVASSMPESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPFDWKILYNLGLVHLTMQQYASAFHFLSAAINFQSKMGELYMLLAVALTNLEDIENAKRSYEQAVALDKCNPLVNLNYAVLLFNHGDKKGALCQYQEMEKKVIALKESSTLDFDPEMVEVAQKMGTALQVGESQAWTKPAKESKSKQRAAPSGKSASMQQPLGSNQALGQAMSSAAGYGKSMQLPPGAGASTPLAKPPSLPLEPEPGSEPGPEETSAPAEAEEQRQEKHKSRQAAE
SIO_010081: BBS4
subclass of: SO_0000673
so part of: BBS4
location: join(899683..899724,900125..900218,909888..909967,913406..913469,914214..914325,914948..915020,916868..916921,918101..918228,920032..920086,920810..920878,921744..921896,922010..922181,922378..922448,924962..925103,925477..925687,926565..926716)
location: region:899683-926716:1
so has part: feature:899683-899724:1:exon
so has part: feature:900125-900218:1:exon
so has part: feature:909888-909967:1:exon
so has part: feature:913406-913469:1:exon
so has part: feature:914214-914325:1:exon
so has part: feature:914948-915020:1:exon
so has part: feature:916868-916921:1:exon
so has part: feature:918101-918228:1:exon
so has part: feature:920032-920086:1:exon
so has part: feature:920810-920878:1:exon
so has part: feature:921744-921896:1:exon
so has part: feature:922010-922181:1:exon
so has part: feature:922378-922448:1:exon
so has part: feature:924962-925103:1:exon
so has part: feature:925477-925687:1:exon
so has part: feature:926565-926716:1:exon

XP_031411060.1
type: Protein
SIO_000068: ncbiprotein

position:926716:1
position: 926716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899683-899724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:900125-900218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:909888-909967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:913406-913469:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:914214-914325:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:914948-915020:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:916868-916921:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:918101-918228:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:920032-920086:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:920810-920878:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:921744-921896:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:922010-922181:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:922378-922448:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:924962-925103:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:925477-925687:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:926565-926716:1:exon

ADPGK
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ADPGK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(931034..942074)
location: region:931034-942074:-1
so has part: feature:931034-942074:-1:exon
subclass of: SO_0000010

100544507
type: Gene
SIO_000068: ncbigene

position:931034:-1
position: 931034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942074:-1
position: 942074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:931034-942074:-1:exon

ADPGK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ADPGK
product: ADP dependent glucokinase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031555240.1
SIO_010081: ADPGK
subclass of: SO_0000673
so part of: ADPGK
location: complement(join(931034..933464,934263..934361,934989..935185,935689..935809,936444..936506,937488..937713,941968..942074))
location: region:931034-942074:-1
so has part: feature:941968-942074:-1:exon
so has part: feature:937488-937713:-1:exon
so has part: feature:936444-936506:-1:exon
so has part: feature:935689-935809:-1:exon
so has part: feature:934989-935185:-1:exon
so has part: feature:934263-934361:-1:exon
so has part: feature:931034-933464:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:941968-942074:-1:exon

position:941968:-1
position: 941968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:937488-937713:-1:exon

position:937488:-1
position: 937488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937713:-1
position: 937713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:936444-936506:-1:exon

position:936444:-1
position: 936444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936506:-1
position: 936506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:935689-935809:-1:exon

position:935689:-1
position: 935689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935809:-1
position: 935809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:934989-935185:-1:exon

position:934989:-1
position: 934989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935185:-1
position: 935185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:934263-934361:-1:exon

position:934263:-1
position: 934263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:934361:-1
position: 934361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:931034-933464:-1:exon

position:933464:-1
position: 933464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADPGK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ADPGK
product: ADP dependent glucokinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_010717160.3
SIO_010081: ADPGK
subclass of: SO_0000673
so part of: ADPGK
location: complement(join(931034..933464,934263..934361,934989..935185,935689..935809,936444..936506,937488..937713,941123..941443))
location: region:931034-941443:-1
so has part: feature:941123-941443:-1:exon
so has part: feature:937488-937713:-1:exon
so has part: feature:936444-936506:-1:exon
so has part: feature:935689-935809:-1:exon
so has part: feature:934989-935185:-1:exon
so has part: feature:934263-934361:-1:exon
so has part: feature:931034-933464:-1:exon

position:941443:-1
position: 941443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941123-941443:-1:exon

position:941123:-1
position: 941123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:937488-937713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936444-936506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935689-935809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:934989-935185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:934263-934361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:931034-933464:-1:exon

ADPGK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ADPGK
product: ADP dependent glucokinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 212 samples with support for all annotated introns
transcript id: XM_010717161.3
SIO_010081: ADPGK
subclass of: SO_0000673
so part of: ADPGK
location: complement(join(932913..933461,934263..934361,934989..935185,935689..935809,936444..936506,937488..937713,941123..941337))
location: region:932913-941337:-1
so has part: feature:941123-941337:-1:exon
so has part: feature:937488-937713:-1:exon
so has part: feature:936444-936506:-1:exon
so has part: feature:935689-935809:-1:exon
so has part: feature:934989-935185:-1:exon
so has part: feature:934263-934361:-1:exon
so has part: feature:932913-933461:-1:exon

position:932913:-1
position: 932913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941337:-1
position: 941337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:941123-941337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937488-937713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936444-936506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935689-935809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:934989-935185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:934263-934361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:932913-933461:-1:exon

position:933461:-1
position: 933461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ADPGK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ADPGK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-dependent glucokinase isoform X2
translation: MWQRSACVGLLALALGYLWLLGPQPSPSILQHLSASLLGGLSRAGSLESRMVAAWQAAIVRPARGWGRVAVGVNACVDVVLSGVKLLEALGLKPGLGKNHDVLNSRQDLREAFTHFMEKGAAAERFFSDAESFHHIAQTASEHPGAQLYVGGNAALIGQKLAANPDLKILLCGPVGPKLHELLDDNVVVPPESMQERDEFHLILEYQAGEEWGQVKAPNANRFIFSHDLSNGALNMLEVFVSSLEEFQPDLVVLSGLHMMEGQSKEMRHRRLMEAVASISDIPTDIPIHLELASMTDQDFMSNIVHQVFPLVNSIGLNEQELLFLTQSASGPHASLASWNGVPDVGAVSDILFWILKEHGKTADRASDLTRIHFHTLAYHILATVDGHWGNQVAAVAAGARAAGAQACATETIDTSRVFLKAPLEFVTSQIEAPSKISLNPDEPVVHWHREGISFHFTPVLVCKDPVRTVGLGDAISAEGLLYSEINLQ
SIO_010081: ADPGK
subclass of: SO_0000673
so part of: ADPGK
location: complement(join(932913..933461,934263..934361,934989..935185,935689..935809,936444..936506,937488..937713,941123..941337))
location: region:932913-941337:-1
so has part: feature:941123-941337:-1:exon
so has part: feature:937488-937713:-1:exon
so has part: feature:936444-936506:-1:exon
so has part: feature:935689-935809:-1:exon
so has part: feature:934989-935185:-1:exon
so has part: feature:934263-934361:-1:exon
so has part: feature:932913-933461:-1:exon

XP_010715463.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:941123-941337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937488-937713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936444-936506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:935689-935809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:934989-935185:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:934263-934361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:932913-933461:-1:exon

ADPGK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ADPGK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-dependent glucokinase isoform X1
translation: MWQRSACVGLLALALGYLWLLGPQPSPSILQHLSASLLGGLSRAGSLESRMVAAWQAAIVRPARGWGRVAVGVNACVDVVLSGVKLLEALGLKPGLGKNHDVLNSRQDLREAFTHFMEKGAAAERFFSDAESFHHIAQTASEHPGAQLYVGGNAALIGQKLAANPDLKILLCGPVGPKLHELLDDNVVVPPESMQERDEFHLILEYQAGEEWGQVKAPNANRFIFSHDLSNGALNMLEVFVSSLEEFQPDLVVLSGLHMMEGQSKEMRHRRLMEAVASISDIPTDIPIHLELASMTDQDFMSNIVHQQVFPLVNSIGLNEQELLFLTQSASGPHASLASWNGVPDVGAVSDILFWILKEHGKTADRASDLTRIHFHTLAYHILATVDGHWGNQVAAVAAGARAAGAQACATETIDTSRVFLKAPLEFVTSQIEAPSKISLNPDEPVVHWHREGISFHFTPVLVCKDPVRTVGLGDAISAEGLLYSEINLQ
SIO_010081: ADPGK
subclass of: SO_0000673
so part of: ADPGK
location: complement(join(932913..933464,934263..934361,934989..935185,935689..935809,936444..936506,937488..937713,941123..941337))
location: region:932913-941337:-1
so has part: feature:941123-941337:-1:exon
so has part: feature:937488-937713:-1:exon
so has part: feature:936444-936506:-1:exon
so has part: feature:935689-935809:-1:exon
so has part: feature:934989-935185:-1:exon
so has part: feature:934263-934361:-1:exon
so has part: feature:932913-933464:-1:exon

XP_010715462.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:941123-941337:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937488-937713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:936444-936506:-1:exon

urn:…
SIO_000300: 4
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urn:…
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SIO_000628: feature:934989-935185:-1:exon

urn:…
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SIO_000628: feature:934263-934361:-1:exon