Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 11, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 11, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015021.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015021.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000972.2.\nOn Dec 18, 2014 this sequence version replaced NC_015021.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 23716164
topology: linear
so has quality: SO_0000987
location: 1..23716164
location: region:1-23716164:1
RO_0002162: 9103

NC_015021
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23716164:1
position: 23716164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-23716164:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 11
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 74063..74162
location: region:74063-74162:1
so has part: feature:74063-74162:1:region

position:74063:1
position: 74063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:74162:1
position: 74162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:74063-74162:1:region

LOC100543530
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100543530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 95116..419385
location: region:95116-419385:1
so has part: feature:95116-419385:1:exon
subclass of: SO_0000010

100543530
type: Gene
SIO_000068: ncbigene

position:95116:1
position: 95116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:419385:1
position: 419385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95116-419385:1:exon

LOC100543530
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543530
product: glypican-5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010716341.3
SIO_010081: LOC100543530
subclass of: SO_0000673
so part of: LOC100543530
location: join(95116..95812,143783..143913,148482..148541,150429..150554,262347..262467,309099..309249,418842..419385)
location: region:95116-419385:1
so has part: feature:95116-95812:1:exon
so has part: feature:143783-143913:1:exon
so has part: feature:148482-148541:1:exon
so has part: feature:150429-150554:1:exon
so has part: feature:262347-262467:1:exon
so has part: feature:309099-309249:1:exon
so has part: feature:418842-419385:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95116-95812:1:exon

position:95812:1
position: 95812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143783-143913:1:exon

position:143783:1
position: 143783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143913:1
position: 143913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:148482-148541:1:exon

position:148482:1
position: 148482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148541:1
position: 148541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150429-150554:1:exon

position:150429:1
position: 150429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:150554:1
position: 150554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:262347-262467:1:exon

position:262347:1
position: 262347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:262467:1
position: 262467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:309099-309249:1:exon

position:309099:1
position: 309099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309249:1
position: 309249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:418842-419385:1:exon

position:418842:1
position: 418842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100543530
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glypican-5-like
translation: MAKEAAEPVKELFTDISLYILGAETTVENAVLRFFDSLFPLVYSRLINPGITDLSEDYTECLRLTRQDINPFGHYSKNMVTELSKSLWASRMLNQALSLGTEVINTTEHAALTKECSRALVRMQYCPHCQGLTLIRPCVGYCLNVMRGCLASVSELDMQWREYISTLEYLTNEMGASHDLEIALTGIWNSINEAILHAQLNGPQLSATVDKVCGQPKQQEGNLSSGQIVPLKEAAEAHTLVLAHASLKNKRSSLPLKASKNDKSRSLKKISREFINYMKRSRTFFASIAERLCDGDLVMRDSSTCWNGEDVVESYTSRVVSSGLKAQINNPELKVRGLDPLISNLIDKLHKFNQLDAEKAKLKLERWSSQDTGSGGGRSEELETSGDCDDEDGCQGSGDRIHTAELMQEKMQDDSHHRPLGHNNGVVNL
SIO_010081: LOC100543530
subclass of: SO_0000673
so part of: LOC100543530
location: join(95189..95812,143783..143913,148482..148541,150429..150554,262347..262467,309099..309249,418842..418918)
location: region:95189-418918:1
so has part: feature:95189-95812:1:exon
so has part: feature:143783-143913:1:exon
so has part: feature:148482-148541:1:exon
so has part: feature:150429-150554:1:exon
so has part: feature:262347-262467:1:exon
so has part: feature:309099-309249:1:exon
so has part: feature:418842-418918:1:exon

XP_010714643.1
type: Protein
SIO_000068: ncbiprotein

position:95189:1
position: 95189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418918:1
position: 418918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95189-95812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:143783-143913:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:148482-148541:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150429-150554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:262347-262467:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309099-309249:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:418842-418918:1:exon

LOC109369401
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369401
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 100288..110555
location: region:100288-110555:1
so has part: feature:100288-110555:1:exon
subclass of: SO_0000011

109369401
type: Gene
SIO_000068: ncbigene

position:100288:1
position: 100288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:110555:1
position: 110555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100288-110555:1:exon

LOC109369401
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369401
product: uncharacterized LOC109369401
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002118385.2
SIO_010081: LOC109369401
subclass of: SO_0000673
so part of: LOC109369401
location: join(100288..100411,100907..100978,103172..103220,103311..103504,109001..110555)
location: region:100288-110555:1
so has part: feature:100288-100411:1:exon
so has part: feature:100907-100978:1:exon
so has part: feature:103172-103220:1:exon
so has part: feature:103311-103504:1:exon
so has part: feature:109001-110555:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100288-100411:1:exon

position:100411:1
position: 100411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:100907-100978:1:exon

position:100907:1
position: 100907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:100978:1
position: 100978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:103172-103220:1:exon

position:103172:1
position: 103172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103220:1
position: 103220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:103311-103504:1:exon

position:103311:1
position: 103311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103504:1
position: 103504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109001-110555:1:exon

position:109001:1
position: 109001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109369400
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(122814..133809)
location: region:122814-133809:-1
so has part: feature:122814-133809:-1:exon
subclass of: SO_0000011

109369400
type: Gene
SIO_000068: ncbigene

position:122814:-1
position: 122814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:133809:-1
position: 133809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:122814-133809:-1:exon

LOC109369400
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369400
product: uncharacterized LOC109369400
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002118382.1
SIO_010081: LOC109369400
subclass of: SO_0000673
so part of: LOC109369400
location: complement(join(122814..124456,127277..127334,127760..127868,128937..129032,133771..133809))
location: region:122814-133809:-1
so has part: feature:133771-133809:-1:exon
so has part: feature:128937-129032:-1:exon
so has part: feature:127760-127868:-1:exon
so has part: feature:127277-127334:-1:exon
so has part: feature:122814-124456:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:133771-133809:-1:exon

position:133771:-1
position: 133771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:128937-129032:-1:exon

position:128937:-1
position: 128937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129032:-1
position: 129032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:127760-127868:-1:exon

position:127760:-1
position: 127760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127868:-1
position: 127868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:127277-127334:-1:exon

position:127277:-1
position: 127277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127334:-1
position: 127334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:122814-124456:-1:exon

position:124456:-1
position: 124456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912516
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912516
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 380474..384399
location: region:380474-384399:1
so has part: feature:380474-384399:1:exon
subclass of: SO_0000011

104912516
type: Gene
SIO_000068: ncbigene

position:380474:1
position: 380474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:384399:1
position: 384399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380474-384399:1:exon

LOC104912516
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912516
product: uncharacterized LOC104912516
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_002118384.1
SIO_010081: LOC104912516
subclass of: SO_0000673
so part of: LOC104912516
location: join(380474..381385,383009..383100,384322..384399)
location: region:380474-384399:1
so has part: feature:380474-381385:1:exon
so has part: feature:383009-383100:1:exon
so has part: feature:384322-384399:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380474-381385:1:exon

position:381385:1
position: 381385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:383009-383100:1:exon

position:383009:1
position: 383009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:383100:1
position: 383100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:384322-384399:1:exon

position:384322:1
position: 384322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109369403
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 502911..504320
location: region:502911-504320:1
so has part: feature:502911-504320:1:exon
subclass of: SO_0000011

109369403
type: Gene
SIO_000068: ncbigene

position:502911:1
position: 502911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504320:1
position: 504320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:502911-504320:1:exon

LOC109369403
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369403
product: uncharacterized LOC109369403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004160896.1
SIO_010081: LOC109369403
subclass of: SO_0000673
so part of: LOC109369403
location: join(502911..502978,503252..503346,504059..504320)
location: region:502911-504320:1
so has part: feature:502911-502978:1:exon
so has part: feature:503252-503346:1:exon
so has part: feature:504059-504320:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:502911-502978:1:exon

position:502978:1
position: 502978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:503252-503346:1:exon

position:503252:1
position: 503252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503346:1
position: 503346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:504059-504320:1:exon

position:504059:1
position: 504059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GPC1
note: glypican 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: <594823..674264
location: region:594823-674264:1
so has part: feature:594823-674264:1:exon
subclass of: SO_0000010

693243
type: Gene
SIO_000068: ncbigene

position:594823:1
position: 594823
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:674264:1
position: 674264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594823-674264:1:exon

GPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GPC1
product: glypican 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001303227.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 3 substitutions and aligns at 89% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001303227.1
SIO_010081: GPC1
subclass of: SO_0000673
so part of: GPC1
location: join(<594823..594982,654131..654522,665248..665413,669098..669228,671432..671551,672089..672222,673338..673513,673950..674264)
location: region:594823-674264:1
so has part: feature:594823-594982:1:exon
so has part: feature:654131-654522:1:exon
so has part: feature:665248-665413:1:exon
so has part: feature:669098-669228:1:exon
so has part: feature:671432-671551:1:exon
so has part: feature:672089-672222:1:exon
so has part: feature:673338-673513:1:exon
so has part: feature:673950-674264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:594823-594982:1:exon

position:594982:1
position: 594982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:654131-654522:1:exon

position:654131:1
position: 654131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654522:1
position: 654522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:665248-665413:1:exon

position:665248:1
position: 665248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665413:1
position: 665413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:669098-669228:1:exon

position:669098:1
position: 669098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:669228:1
position: 669228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:671432-671551:1:exon

position:671432:1
position: 671432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:671551:1
position: 671551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:672089-672222:1:exon

position:672089:1
position: 672089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672222:1
position: 672222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:673338-673513:1:exon

position:673338:1
position: 673338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:673513:1
position: 673513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:673950-674264:1:exon

position:673950:1
position: 673950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GPC1
inference: similar to AA sequence (same species):RefSeq:NP_001290156.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution and aligns at 90% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: glypican-1 precursor
translation: MRFFPWGFWLLCVASAPARGDSGSKARSCAEVRQLYGAKGFSLNGVPQAEISGEHLRICPQGYTCCTSEMEENFANKSRSEFEAMMKEAGRSVQTILTAQYRSFDNYFQDLLNKSEKALYDTFPSLYGELYTQNTKVFKDLYSELRRYYRGSNINLEEALNEFWTRLLERLFKLMNAQYHITDEYLDCMVKHAEQHKPFGEVPRDLKVKATRAFIVARSYAQGFLVGSDVVKKVSQVSLSHECTRAVMKLMYCPHCRGMASVKPCSNYCLNVVKGCLANQADLNTEWKYLMDALVAVADRIDGPSNVDTVIGTIHMRISEAISNLQENKDSITAKVFQGCGNPKISTKGSSSEDKKRRGKVTLEAKSSAVALEMLVLDAKGNLTALKSYWVTLPGVLCSKKVMASAAADDKCWNGMTKGSYLPEVMGDGLANQINNPEVEVDITKPDMTIRQQIMQLKIMTNRLGNANMGNDVDFQDASDDMSGSGSGDSCPDDVCGKRLSKSPSTRQPETHAIPKQSGHGVIGASSRSLPSAFLLFLLGASIAVQHLWR
SIO_010081: GPC1
subclass of: SO_0000673
so part of: GPC1
location: join(<594823..594982,654131..654522,665248..665413,669098..669228,671432..671551,672089..672222,673338..673513,673950..674167)
location: region:594823-674167:1
so has part: feature:594823-594982:1:exon
so has part: feature:654131-654522:1:exon
so has part: feature:665248-665413:1:exon
so has part: feature:669098-669228:1:exon
so has part: feature:671432-671551:1:exon
so has part: feature:672089-672222:1:exon
so has part: feature:673338-673513:1:exon
so has part: feature:673950-674167:1:exon

NP_001290156.1
type: Protein
SIO_000068: ncbiprotein

position:674167:1
position: 674167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594823-594982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:654131-654522:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:665248-665413:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:669098-669228:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:671432-671551:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:672089-672222:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:673338-673513:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:673950-674167:1:exon

DUSP28
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DUSP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 676540..680808
location: region:676540-680808:1
so has part: feature:676540-680808:1:exon
subclass of: SO_0000010

100544144
type: Gene
SIO_000068: ncbigene

position:676540:1
position: 676540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680808:1
position: 680808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676540-680808:1:exon

DUSP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DUSP28
product: dual specificity phosphatase 28
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019618904.2
SIO_010081: DUSP28
subclass of: SO_0000673
so part of: DUSP28
location: join(676540..678112,678348..678409,678667..678820,679180..679436,679720..679805,680113..680204,680319..680437,680552..680808)
location: region:676540-680808:1
so has part: feature:676540-678112:1:exon
so has part: feature:678348-678409:1:exon
so has part: feature:678667-678820:1:exon
so has part: feature:679180-679436:1:exon
so has part: feature:679720-679805:1:exon
so has part: feature:680113-680204:1:exon
so has part: feature:680319-680437:1:exon
so has part: feature:680552-680808:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:676540-678112:1:exon

position:678112:1
position: 678112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678348-678409:1:exon

position:678348:1
position: 678348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678409:1
position: 678409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:678667-678820:1:exon

position:678667:1
position: 678667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678820:1
position: 678820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:679180-679436:1:exon

position:679180:1
position: 679180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679436:1
position: 679436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:679720-679805:1:exon

position:679720:1
position: 679720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679805:1
position: 679805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:680113-680204:1:exon

position:680113:1
position: 680113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680204:1
position: 680204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:680319-680437:1:exon

position:680319:1
position: 680319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680437:1
position: 680437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:680552-680808:1:exon

position:680552:1
position: 680552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUSP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DUSP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 81
translation: MGTGHRKAGCYCCGSRVRSPLSLPVGKHRARGTWPWKVFWDTGWGGPMLPPFTAAVRAAVWNTVAAHVRQQLLQRKGIRIPTLGSFDTILERVQVGDGHLAVQRPVFHLARNLAESHHLTDDKAYVPGDKVLQPLRYTQIAAATFVSPKRVVGCIQATMSLFSRCIAQGRNVALILRDIGMLLIEGAQVQMKYYCDFLEVMAGEDTLKEALLRVPGVPSSAIPHSAAPASLTRSGCVIIFPEFELQCVHHMALGDTRKPMKGRQKKAARDKDGCARKQGQRPEGKNPQAAEPPPAQHGAARSTVPGGIAGRQAPRLKGASLAMRAFLQPGTQSLG
SIO_010081: DUSP28
subclass of: SO_0000673
so part of: DUSP28
location: join(677947..678112,678348..678409,678667..678820,679180..679436,679720..679805,680113..680204,680319..680437,680552..680623)
location: region:677947-680623:1
so has part: feature:677947-678112:1:exon
so has part: feature:678348-678409:1:exon
so has part: feature:678667-678820:1:exon
so has part: feature:679180-679436:1:exon
so has part: feature:679720-679805:1:exon
so has part: feature:680113-680204:1:exon
so has part: feature:680319-680437:1:exon
so has part: feature:680552-680623:1:exon

XP_019474449.1
type: Protein
SIO_000068: ncbiprotein

position:677947:1
position: 677947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:680623:1
position: 680623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677947-678112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:678348-678409:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:678667-678820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:679180-679436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:679720-679805:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:680113-680204:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:680319-680437:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:680552-680623:1:exon

DUSP28
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DUSP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <681645..683277
location: region:681645-683277:1
so has part: feature:681645-683277:1:exon
subclass of: SO_0000010

109369361
type: Gene
SIO_000068: ncbigene

position:681645:1
position: 681645
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:683277:1
position: 683277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681645-683277:1:exon

DUSP28
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DUSP28
product: dual specificity phosphatase 28
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_019618849.1
SIO_010081: DUSP28
subclass of: SO_0000673
so part of: DUSP28
location: join(<681645..681983,683049..683277)
location: region:681645-683277:1
so has part: feature:681645-681983:1:exon
so has part: feature:683049-683277:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:681645-681983:1:exon

position:681983:1
position: 681983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:683049-683277:1:exon

position:683049:1
position: 683049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DUSP28
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DUSP28
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dual specificity phosphatase 28
translation: VGKVTASLLISNARAACNAELLAREGVTFCVNVSRQQPFPSFQQARAMRVPVFDDPAEDLYRYFEQCGDAIEEAVGSGGKCLVYCKNGRSRSAAICTAYLMRHRHLPLQDAFEMVKAARPVAEPNPGFWSQLQRYEEDLKIPKQSDLLSKGLNSL
SIO_010081: DUSP28
subclass of: SO_0000673
so part of: DUSP28
location: join(<681645..681983,683049..683177)
location: region:681645-683177:1
so has part: feature:681645-681983:1:exon
so has part: feature:683049-683177:1:exon

XP_019474394.1
type: Protein
SIO_000068: ncbiprotein

position:683177:1
position: 683177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:681645-681983:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:683049-683177:1:exon

LOC100544298
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544298
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(685377..694536)
location: region:685377-694536:-1
so has part: feature:685377-694536:-1:exon
subclass of: SO_0000010

100544298
type: Gene
SIO_000068: ncbigene

position:685377:-1
position: 685377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694536:-1
position: 694536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:685377-694536:-1:exon

LOC100544298
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544298
product: claudin-15-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_019618905.2
SIO_010081: LOC100544298
subclass of: SO_0000673
so part of: LOC100544298
location: complement(join(685377..685524,686823..686933,690081..690162,690305..690470,693108..694536))
location: region:685377-694536:-1
so has part: feature:693108-694536:-1:exon
so has part: feature:690305-690470:-1:exon
so has part: feature:690081-690162:-1:exon
so has part: feature:686823-686933:-1:exon
so has part: feature:685377-685524:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:693108-694536:-1:exon

position:693108:-1
position: 693108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:690305-690470:-1:exon

position:690305:-1
position: 690305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690470:-1
position: 690470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:690081-690162:-1:exon

position:690081:-1
position: 690081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690162:-1
position: 690162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:686823-686933:-1:exon

position:686823:-1
position: 686823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686933:-1
position: 686933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:685377-685524:-1:exon

position:685524:-1
position: 685524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100544298
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544298
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: claudin-15-like
translation: MSAALEIVGFLLCLVGWAFIGGTLPHSYWRVSSLHGSVITASTLYENLWKSCAEDSTGVSNCKQFGSLFALPVHVQACRALMIISILLGFVAAVVSLLGLKCTNVGLSDEDEKMKVAVTGGFLFILGGLCSMVAVSWYAAMITAQFFNPLYAGTKYELGDALYLGWAGSVLCMLGGIFLTCSCKGKEKQKYSANKYRYSAGQAAGQQQIYTTNAEMATSSKEYV
SIO_010081: LOC100544298
subclass of: SO_0000673
so part of: LOC100544298
location: complement(join(685425..685524,686823..686933,690081..690162,690305..690470,693108..693324))
location: region:685425-693324:-1
so has part: feature:693108-693324:-1:exon
so has part: feature:690305-690470:-1:exon
so has part: feature:690081-690162:-1:exon
so has part: feature:686823-686933:-1:exon
so has part: feature:685425-685524:-1:exon

XP_019474450.1
type: Protein
SIO_000068: ncbiprotein

position:685425:-1
position: 685425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693324:-1
position: 693324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693108-693324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:690305-690470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:690081-690162:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:686823-686933:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:685425-685524:-1:exon

PARL
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PARL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 703385..714381
location: region:703385-714381:1
so has part: feature:703385-714381:1:exon
subclass of: SO_0000010

100544454
type: Gene
SIO_000068: ncbigene

position:703385:1
position: 703385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714381:1
position: 714381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703385-714381:1:exon

PARL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PARL
product: presenilin associated rhomboid like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003208941.2
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(703385..703426,705077..705125,706869..706964,708632..708781,709193..709263,710407..710508,711990..712087,714078..714381)
location: region:703385-714381:1
so has part: feature:703385-703426:1:exon
so has part: feature:705077-705125:1:exon
so has part: feature:706869-706964:1:exon
so has part: feature:708632-708781:1:exon
so has part: feature:709193-709263:1:exon
so has part: feature:710407-710508:1:exon
so has part: feature:711990-712087:1:exon
so has part: feature:714078-714381:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:703385-703426:1:exon

position:703426:1
position: 703426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:705077-705125:1:exon

position:705077:1
position: 705077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:705125:1
position: 705125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:706869-706964:1:exon

position:706869:1
position: 706869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706964:1
position: 706964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:708632-708781:1:exon

position:708632:1
position: 708632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708781:1
position: 708781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:709193-709263:1:exon

position:709193:1
position: 709193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:709263:1
position: 709263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:710407-710508:1:exon

position:710407:1
position: 710407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710508:1
position: 710508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:711990-712087:1:exon

position:711990:1
position: 711990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:712087:1
position: 712087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:714078-714381:1:exon

position:714078:1
position: 714078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PARL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PARL
product: presenilin associated rhomboid like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 198 samples with support for all annotated introns
transcript id: XM_010716342.3
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(704589..704690,705077..705125,706869..706964,708632..708781,709193..709263,710407..710508,711990..712087,714078..714381)
location: region:704589-714381:1
so has part: feature:704589-704690:1:exon
so has part: feature:705077-705125:1:exon
so has part: feature:706869-706964:1:exon
so has part: feature:708632-708781:1:exon
so has part: feature:709193-709263:1:exon
so has part: feature:710407-710508:1:exon
so has part: feature:711990-712087:1:exon
so has part: feature:714078-714381:1:exon

position:704589:1
position: 704589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704589-704690:1:exon

position:704690:1
position: 704690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:705077-705125:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:706869-706964:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708632-708781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:709193-709263:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:710407-710508:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:711990-712087:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:714078-714381:1:exon

PARL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PARL
product: presenilin associated rhomboid like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_010716343.3
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(705163..705181,706869..706964,708632..708781,709193..709263,710407..710508,711990..712087,714078..714381)
location: region:705163-714381:1
so has part: feature:705163-705181:1:exon
so has part: feature:706869-706964:1:exon
so has part: feature:708632-708781:1:exon
so has part: feature:709193-709263:1:exon
so has part: feature:710407-710508:1:exon
so has part: feature:711990-712087:1:exon
so has part: feature:714078-714381:1:exon

position:705163:1
position: 705163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705163-705181:1:exon

position:705181:1
position: 705181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:706869-706964:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708632-708781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:709193-709263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710407-710508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:711990-712087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:714078-714381:1:exon

PARL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PARL
product: presenilin associated rhomboid like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 166 samples with support for all annotated introns
transcript id: XM_010716345.3
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(705229..706614,706869..706964,708632..708781,709193..709263,710407..710508,711990..712087,714078..714381)
location: region:705229-714381:1
so has part: feature:705229-706614:1:exon
so has part: feature:706869-706964:1:exon
so has part: feature:708632-708781:1:exon
so has part: feature:709193-709263:1:exon
so has part: feature:710407-710508:1:exon
so has part: feature:711990-712087:1:exon
so has part: feature:714078-714381:1:exon

position:705229:1
position: 705229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705229-706614:1:exon

position:706614:1
position: 706614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:706869-706964:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:708632-708781:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:709193-709263:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710407-710508:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:711990-712087:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:714078-714381:1:exon

PARL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PARL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: presenilins-associated rhomboid-like protein, mitochondrial
translation: MRRIMFTYFTSDPSSKALCSPMLLSTFSHFSLFHMAANMYVLWSFSSSVVSLLGCEQFIAVYLSAGVISTFVSYVAKMATGKFEPSLGASGAIMTVLAAVCTKMPEAKLAIIFLPMFTFTAGNALKAIIAFDTAGLALGWRFFDHAAHLGGALFGMWYVTYGHELIWKNREPLVKAWHEMRTRNAGKGGGRSN
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(706919..706964,708632..708781,709193..709263,710407..710508,711990..712087,714078..714192)
location: region:706919-714192:1
so has part: feature:706919-706964:1:exon
so has part: feature:708632-708781:1:exon
so has part: feature:709193-709263:1:exon
so has part: feature:710407-710508:1:exon
so has part: feature:711990-712087:1:exon
so has part: feature:714078-714192:1:exon

XP_010714644.1
type: Protein
SIO_000068: ncbiprotein

position:706919:1
position: 706919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714192:1
position: 714192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:706919-706964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:708632-708781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709193-709263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710407-710508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711990-712087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714078-714192:1:exon

PARL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PARL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: presenilins-associated rhomboid-like protein, mitochondrial
translation: MRRIMFTYFTSDPSSKALCSPMLLSTFSHFSLFHMAANMYVLWSFSSSVVSLLGCEQFIAVYLSAGVISTFVSYVAKMATGKFEPSLGASGAIMTVLAAVCTKMPEAKLAIIFLPMFTFTAGNALKAIIAFDTAGLALGWRFFDHAAHLGGALFGMWYVTYGHELIWKNREPLVKAWHEMRTRNAGKGGGRSN
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(706919..706964,708632..708781,709193..709263,710407..710508,711990..712087,714078..714192)
location: region:706919-714192:1
so has part: feature:706919-706964:1:exon
so has part: feature:708632-708781:1:exon
so has part: feature:709193-709263:1:exon
so has part: feature:710407-710508:1:exon
so has part: feature:711990-712087:1:exon
so has part: feature:714078-714192:1:exon

XP_010714645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:706919-706964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:708632-708781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709193-709263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710407-710508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711990-712087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714078-714192:1:exon

PARL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PARL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: presenilins-associated rhomboid-like protein, mitochondrial
translation: MRRIMFTYFTSDPSSKALCSPMLLSTFSHFSLFHMAANMYVLWSFSSSVVSLLGCEQFIAVYLSAGVISTFVSYVAKMATGKFEPSLGASGAIMTVLAAVCTKMPEAKLAIIFLPMFTFTAGNALKAIIAFDTAGLALGWRFFDHAAHLGGALFGMWYVTYGHELIWKNREPLVKAWHEMRTRNAGKGGGRSN
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(706919..706964,708632..708781,709193..709263,710407..710508,711990..712087,714078..714192)
location: region:706919-714192:1
so has part: feature:706919-706964:1:exon
so has part: feature:708632-708781:1:exon
so has part: feature:709193-709263:1:exon
so has part: feature:710407-710508:1:exon
so has part: feature:711990-712087:1:exon
so has part: feature:714078-714192:1:exon

XP_010714647.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:706919-706964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:708632-708781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709193-709263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710407-710508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711990-712087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714078-714192:1:exon

PARL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PARL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: presenilins-associated rhomboid-like protein, mitochondrial
translation: MRRIMFTYFTSDPSSKALCSPMLLSTFSHFSLFHMAANMYVLWSFSSSVVSLLGCEQFIAVYLSAGVISTFVSYVAKMATGKFEPSLGASGAIMTVLAAVCTKMPEAKLAIIFLPMFTFTAGNALKAIIAFDTAGLALGWRFFDHAAHLGGALFGMWYVTYGHELIWKNREPLVKAWHEMRTRNAGKGGGRSN
SIO_010081: PARL
subclass of: SO_0000673
so part of: PARL
location: join(706919..706964,708632..708781,709193..709263,710407..710508,711990..712087,714078..714192)
location: region:706919-714192:1
so has part: feature:706919-706964:1:exon
so has part: feature:708632-708781:1:exon
so has part: feature:709193-709263:1:exon
so has part: feature:710407-710508:1:exon
so has part: feature:711990-712087:1:exon
so has part: feature:714078-714192:1:exon

XP_003208989.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:706919-706964:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:708632-708781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:709193-709263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:710407-710508:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711990-712087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:714078-714192:1:exon

LOC104912517
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912517
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 717053..722900
location: region:717053-722900:1
so has part: feature:717053-722900:1:exon
subclass of: SO_0000011

104912517
type: Gene
SIO_000068: ncbigene

position:717053:1
position: 717053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722900:1
position: 722900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717053-722900:1:exon

LOC104912517
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912517
product: uncharacterized LOC104912517
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_002118391.1
SIO_010081: LOC104912517
subclass of: SO_0000673
so part of: LOC104912517
location: join(717053..717373,719083..719200,721003..722900)
location: region:717053-722900:1
so has part: feature:717053-717373:1:exon
so has part: feature:719083-719200:1:exon
so has part: feature:721003-722900:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717053-717373:1:exon

position:717373:1
position: 717373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:719083-719200:1:exon

position:719083:1
position: 719083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:719200:1
position: 719200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:721003-722900:1:exon

position:721003:1
position: 721003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

YEATS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: YEATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(724454..769134)
location: region:724454-769134:-1
so has part: feature:724454-769134:-1:exon
subclass of: SO_0000010

100544611
type: Gene
SIO_000068: ncbigene

position:724454:-1
position: 724454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769134:-1
position: 769134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:724454-769134:-1:exon

YEATS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: YEATS2
product: YEATS domain containing 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 186 samples with support for all annotated introns
transcript id: XM_031555092.1
SIO_010081: YEATS2
subclass of: SO_0000673
so part of: YEATS2
location: complement(join(724454..727306,728109..728182,729582..729656,730802..731027,732174..732375,733276..733355,734116..734189,735119..735230,736202..736300,736534..736665,738976..739174,740888..741061,741743..741898,743087..743199,744726..744887,745664..745922,747117..747290,748388..748495,750753..750856,753069..753227,755069..755308,756905..757091,758057..758101,759110..759221,760874..761035,762126..762241,763930..764172,767102..767194,767300..767397,769043..769134))
location: region:724454-769134:-1
so has part: feature:769043-769134:-1:exon
so has part: feature:767300-767397:-1:exon
so has part: feature:767102-767194:-1:exon
so has part: feature:763930-764172:-1:exon
so has part: feature:762126-762241:-1:exon
so has part: feature:760874-761035:-1:exon
so has part: feature:759110-759221:-1:exon
so has part: feature:758057-758101:-1:exon
so has part: feature:756905-757091:-1:exon
so has part: feature:755069-755308:-1:exon
so has part: feature:753069-753227:-1:exon
so has part: feature:750753-750856:-1:exon
so has part: feature:748388-748495:-1:exon
so has part: feature:747117-747290:-1:exon
so has part: feature:745664-745922:-1:exon
so has part: feature:744726-744887:-1:exon
so has part: feature:743087-743199:-1:exon
so has part: feature:741743-741898:-1:exon
so has part: feature:740888-741061:-1:exon
so has part: feature:738976-739174:-1:exon
so has part: feature:736534-736665:-1:exon
so has part: feature:736202-736300:-1:exon
so has part: feature:735119-735230:-1:exon
so has part: feature:734116-734189:-1:exon
so has part: feature:733276-733355:-1:exon
so has part: feature:732174-732375:-1:exon
so has part: feature:730802-731027:-1:exon
so has part: feature:729582-729656:-1:exon
so has part: feature:728109-728182:-1:exon
so has part: feature:724454-727306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:769043-769134:-1:exon

position:769043:-1
position: 769043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:767300-767397:-1:exon

position:767300:-1
position: 767300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767397:-1
position: 767397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:767102-767194:-1:exon

position:767102:-1
position: 767102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767194:-1
position: 767194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:763930-764172:-1:exon

position:763930:-1
position: 763930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764172:-1
position: 764172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:762126-762241:-1:exon

position:762126:-1
position: 762126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762241:-1
position: 762241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:760874-761035:-1:exon

position:760874:-1
position: 760874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761035:-1
position: 761035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:759110-759221:-1:exon

position:759110:-1
position: 759110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759221:-1
position: 759221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:758057-758101:-1:exon

position:758057:-1
position: 758057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758101:-1
position: 758101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:756905-757091:-1:exon

position:756905:-1
position: 756905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:757091:-1
position: 757091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:755069-755308:-1:exon

position:755069:-1
position: 755069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755308:-1
position: 755308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:753069-753227:-1:exon

position:753069:-1
position: 753069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753227:-1
position: 753227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:750753-750856:-1:exon

position:750753:-1
position: 750753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:750856:-1
position: 750856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:748388-748495:-1:exon

position:748388:-1
position: 748388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748495:-1
position: 748495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:747117-747290:-1:exon

position:747117:-1
position: 747117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747290:-1
position: 747290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:745664-745922:-1:exon

position:745664:-1
position: 745664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745922:-1
position: 745922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:744726-744887:-1:exon

position:744726:-1
position: 744726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744887:-1
position: 744887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:743087-743199:-1:exon

position:743087:-1
position: 743087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743199:-1
position: 743199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:741743-741898:-1:exon

position:741743:-1
position: 741743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741898:-1
position: 741898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:740888-741061:-1:exon

position:740888:-1
position: 740888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741061:-1
position: 741061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:738976-739174:-1:exon

position:738976:-1
position: 738976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739174:-1
position: 739174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:736534-736665:-1:exon

position:736534:-1
position: 736534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736665:-1
position: 736665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:736202-736300:-1:exon

position:736202:-1
position: 736202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736300:-1
position: 736300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:735119-735230:-1:exon

position:735119:-1
position: 735119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735230:-1
position: 735230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:734116-734189:-1:exon

position:734116:-1
position: 734116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734189:-1
position: 734189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:733276-733355:-1:exon

position:733276:-1
position: 733276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733355:-1
position: 733355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:732174-732375:-1:exon

position:732174:-1
position: 732174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:732375:-1
position: 732375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:730802-731027:-1:exon

position:730802:-1
position: 730802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731027:-1
position: 731027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:729582-729656:-1:exon

position:729582:-1
position: 729582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729656:-1
position: 729656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:728109-728182:-1:exon

position:728109:-1
position: 728109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728182:-1
position: 728182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:724454-727306:-1:exon

position:727306:-1
position: 727306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

YEATS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: YEATS2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: YEATS domain-containing protein 2
translation: MKNKEHEIEVIDQRLIEARRMMDKLRACIVANYYASAGLLKPGEGTRSCDATILNHPSIKKFLESPSRSSSPAHQGSDAPSANHSESDSLSQHNDFFLDKDNGSLDADERLANSLDQRQSRSAGRDSLGVSSSQKPGQRTAGLSNDETSRLYVKKTIVVGNVSKYIPPDKREENDQSTHKWMVYVRGSRREPSINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPVRVQIHFKDSQNKRIDIIHNLKLDRTYTGLQTLGAETVVDVELHRHSLGEEYLFSQSSESDLSDAPASLPLPLSIPAPVKASSPIKQLRDSSPDASVDKGFPGNAETERHATFYSLPSSIERTPTKLATQKVPFGSHGNSAFQPIAASCKIVPQGQIPSPAESPGKSFQPITMSCKIVSGSPISTPSPSPLPRTPTSTPVHMKQGSTSSVINNPYVIVDKPGQMVGAAATNTGSPTSKLSNVCQASHGAGSPVPKSHGSSFVTSAVKQEDSLFATMPPLCPIGSHSKVQSPKSVTGGLGAFTKVIIKQEPGELPQQPQVSAAGPTTQTSVQQYVTVKGSHMLALSPQKPAVSTSEGTAQSKVVGVPVGSALQSTVKQAVAISGGQILVAKSGSSVAKAVGPKQVVTQGVAKAIVSGGGGTIVAQPVQAITKAQVTSTGAQKSTSQGSVMATLQLPATNLANLANLPPGTKLYLTTNSKNPSGKGKLLLIPQGAILRATNNASLQSGGSTNSGGGGTQSTSSNLSQHLTYTSYILKQTPQGTFLVGQPSPQSSGKQLTPASVVQGNVGLGASSTQGQALKVITGQKTALFTQATASGQTSLMKISDGSLKSVSASSQLSKPGTTVLRVSGGVITTAAAPAVALPTNGVAQQIDNAGSSSSSSGAPAAKTSGQQHQVCINQTQSASSVASKAATSAVVSVASLVTASTPVTGKAAVSGLLKIHSNQSSPQQAVLTVPSQLKQLGVNTASGGVQTILMPMNKVIQSLSTSKVSAVTAVTSASMAVSSPSVASITKVKMEPDSTGQNCTSVGTQEGQAAVKTEENSELGNYIINIEYLENTQQLLTAIVKKVPLIAEKSEDVSSYCAGSVEQYYSWNIGKRRAAEWQRAMTVRKILQEIIEKHPRFHSITPLKTKHVVQWCRCHGYTPPDPETLRNDEDSIEDVLTQIDSEPEYPSSYSSGEDLCRKLEQLQQFLKQEPEHEEEVDVLNFSEPLKINIXKEQEEKQEEMKFYLASLPASEFVRDTAEKIGISFQPAEVQRNVYASVIEDMILKATEQLMSDILRQALAVAYQTAPHNRTPREITVMNIHKAICNIPFLDFLTNKHMKILNEEQ
SIO_010081: YEATS2
subclass of: SO_0000673
so part of: YEATS2
location: complement(join(727198..727306,728109..728182,729582..729656,730802..731027,732174..732375,733276..733355,734116..734189,735119..735230,736202..736300,736534..736665,738976..739174,740888..741061,741743..741898,743087..743199,744726..744887,745664..745922,747117..747290,748388..748495,750753..750856,753069..753227,755069..755308,756905..757091,758057..758101,759110..759221,760874..761035,762126..762241,763930..764172,767102..767194,767300..767338))
location: region:727198-767338:-1
so has part: feature:767300-767338:-1:exon
so has part: feature:767102-767194:-1:exon
so has part: feature:763930-764172:-1:exon
so has part: feature:762126-762241:-1:exon
so has part: feature:760874-761035:-1:exon
so has part: feature:759110-759221:-1:exon
so has part: feature:758057-758101:-1:exon
so has part: feature:756905-757091:-1:exon
so has part: feature:755069-755308:-1:exon
so has part: feature:753069-753227:-1:exon
so has part: feature:750753-750856:-1:exon
so has part: feature:748388-748495:-1:exon
so has part: feature:747117-747290:-1:exon
so has part: feature:745664-745922:-1:exon
so has part: feature:744726-744887:-1:exon
so has part: feature:743087-743199:-1:exon
so has part: feature:741743-741898:-1:exon
so has part: feature:740888-741061:-1:exon
so has part: feature:738976-739174:-1:exon
so has part: feature:736534-736665:-1:exon
so has part: feature:736202-736300:-1:exon
so has part: feature:735119-735230:-1:exon
so has part: feature:734116-734189:-1:exon
so has part: feature:733276-733355:-1:exon
so has part: feature:732174-732375:-1:exon
so has part: feature:730802-731027:-1:exon
so has part: feature:729582-729656:-1:exon
so has part: feature:728109-728182:-1:exon
so has part: feature:727198-727306:-1:exon

XP_031410952.1
type: Protein
SIO_000068: ncbiprotein

position:727198:-1
position: 727198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767338:-1
position: 767338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:767300-767338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:767102-767194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:763930-764172:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762126-762241:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:760874-761035:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759110-759221:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758057-758101:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:756905-757091:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:755069-755308:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:753069-753227:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:750753-750856:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:748388-748495:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:747117-747290:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:745664-745922:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:744726-744887:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:743087-743199:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:741743-741898:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:740888-741061:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:738976-739174:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:736534-736665:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:736202-736300:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:735119-735230:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:734116-734189:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:733276-733355:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:732174-732375:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:730802-731027:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:729582-729656:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:728109-728182:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:727198-727306:-1:exon

KLHL24
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KLHL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(769362..790820)
location: region:769362-790820:-1
so has part: feature:769362-790820:-1:exon
subclass of: SO_0000010

100543682
type: Gene
SIO_000068: ncbigene

position:769362:-1
position: 769362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790820:-1
position: 790820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:769362-790820:-1:exon

KLHL24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KLHL24
product: kelch like family member 24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_010716347.3
SIO_010081: KLHL24
subclass of: SO_0000673
so part of: KLHL24
location: complement(join(769362..774326,775424..775612,776011..776199,777255..777373,777955..778139,781969..782956,790710..790820))
location: region:769362-790820:-1
so has part: feature:790710-790820:-1:exon
so has part: feature:781969-782956:-1:exon
so has part: feature:777955-778139:-1:exon
so has part: feature:777255-777373:-1:exon
so has part: feature:776011-776199:-1:exon
so has part: feature:775424-775612:-1:exon
so has part: feature:769362-774326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:790710-790820:-1:exon

position:790710:-1
position: 790710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:781969-782956:-1:exon

position:781969:-1
position: 781969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782956:-1
position: 782956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:777955-778139:-1:exon

position:777955:-1
position: 777955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778139:-1
position: 778139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:777255-777373:-1:exon

position:777255:-1
position: 777255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777373:-1
position: 777373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:776011-776199:-1:exon

position:776011:-1
position: 776011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776199:-1
position: 776199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:775424-775612:-1:exon

position:775424:-1
position: 775424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775612:-1
position: 775612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:769362-774326:-1:exon

position:774326:-1
position: 774326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KLHL24
product: kelch like family member 24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 150 samples with support for all annotated introns
transcript id: XM_010716348.3
SIO_010081: KLHL24
subclass of: SO_0000673
so part of: KLHL24
location: complement(join(769362..774326,775424..775612,776011..776199,777255..777373,777955..778139,781969..782956,786842..786996))
location: region:769362-786996:-1
so has part: feature:786842-786996:-1:exon
so has part: feature:781969-782956:-1:exon
so has part: feature:777955-778139:-1:exon
so has part: feature:777255-777373:-1:exon
so has part: feature:776011-776199:-1:exon
so has part: feature:775424-775612:-1:exon
so has part: feature:769362-774326:-1:exon

position:786996:-1
position: 786996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786842-786996:-1:exon

position:786842:-1
position: 786842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:781969-782956:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777955-778139:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:777255-777373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:776011-776199:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:775424-775612:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:769362-774326:-1:exon

KLHL24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KLHL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 24
translation: MVLILGRRLNREDSGIRDSPATKRKVFEMDPKSLSGPEFFDFSSGSSHAESILQIFNEFRDSRLFTDVIICVEGREFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMDCFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCRNFALQTFEDVSQHEEFLELGKDELIDYICSDELVITKEEMVFEAVMRWVYRAVELRRPVLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLLHEARRYHILGNEMMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAKLPEFTKSEYAVCALRNDILVSGGRINSRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLGKVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCVGKLFVIGGGPDDNTCSDKVQSYDPDTNSWLLRATIPIAKRCITAVSLNNLIYVAGGLTKAIYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGRRENGEATDTILCYDPATGIITGVAAMPRPVSYHGCVTIHRYNEKGFKL
SIO_010081: KLHL24
subclass of: SO_0000673
so part of: KLHL24
location: complement(join(774126..774326,775424..775612,776011..776199,777255..777373,777955..778139,781969..782888))
location: region:774126-782888:-1
so has part: feature:781969-782888:-1:exon
so has part: feature:777955-778139:-1:exon
so has part: feature:777255-777373:-1:exon
so has part: feature:776011-776199:-1:exon
so has part: feature:775424-775612:-1:exon
so has part: feature:774126-774326:-1:exon

XP_010714649.1
type: Protein
SIO_000068: ncbiprotein

position:774126:-1
position: 774126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782888:-1
position: 782888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781969-782888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:777955-778139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777255-777373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:776011-776199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:775424-775612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774126-774326:-1:exon

KLHL24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KLHL24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch-like protein 24
translation: MVLILGRRLNREDSGIRDSPATKRKVFEMDPKSLSGPEFFDFSSGSSHAESILQIFNEFRDSRLFTDVIICVEGREFPCHRAVLSACSSYFRAMFCNDHRESREMLVEINGILAEAMDCFLQYVYTGKVKITTENVQYLFETSSLFQISVLRDACAKFLEEQLDPCNCLGIQRFADTHSLKTLFTKCRNFALQTFEDVSQHEEFLELGKDELIDYICSDELVITKEEMVFEAVMRWVYRAVELRRPVLHELLTHVRLPLLHPNYFVQTVEVDQLIQNSPECYQLLHEARRYHILGNEMMSPRTRPRRSTGYSEVIVVVGGCERVGGFNLPYTECYDPVTGEWKSLAKLPEFTKSEYAVCALRNDILVSGGRINSRDVWIYNSQLNIWIRVASLNKGRWRHKMAVLLGKVYVVGGYDGQNRLSSVECYDSFSNRWTEVAPLKEAVSSPAVTSCVGKLFVIGGGPDDNTCSDKVQSYDPDTNSWLLRATIPIAKRCITAVSLNNLIYVAGGLTKAIYCYDPVEDYWMHVQNTFSRQENCGMSVCNGKIYILGGRRENGEATDTILCYDPATGIITGVAAMPRPVSYHGCVTIHRYNEKGFKL
SIO_010081: KLHL24
subclass of: SO_0000673
so part of: KLHL24
location: complement(join(774126..774326,775424..775612,776011..776199,777255..777373,777955..778139,781969..782888))
location: region:774126-782888:-1
so has part: feature:781969-782888:-1:exon
so has part: feature:777955-778139:-1:exon
so has part: feature:777255-777373:-1:exon
so has part: feature:776011-776199:-1:exon
so has part: feature:775424-775612:-1:exon
so has part: feature:774126-774326:-1:exon

XP_010714650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:781969-782888:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:777955-778139:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:777255-777373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:776011-776199:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:775424-775612:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:774126-774326:-1:exon

KLHL6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: KLHL6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 797925..816970
location: region:797925-816970:1
so has part: feature:797925-816970:1:exon
subclass of: SO_0000010

100543838
type: Gene
SIO_000068: ncbigene

position:797925:1
position: 797925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816970:1
position: 816970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797925-816970:1:exon

KLHL6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: KLHL6
product: kelch like family member 6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_003208937.4
SIO_010081: KLHL6
subclass of: SO_0000673
so part of: KLHL6
location: join(797925..798307,802181..802346,805940..806389,808572..808809,812790..812992,813894..814107,815993..816970)
location: region:797925-816970:1
so has part: feature:797925-798307:1:exon
so has part: feature:802181-802346:1:exon
so has part: feature:805940-806389:1:exon
so has part: feature:808572-808809:1:exon
so has part: feature:812790-812992:1:exon
so has part: feature:813894-814107:1:exon
so has part: feature:815993-816970:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:797925-798307:1:exon

position:798307:1
position: 798307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802181-802346:1:exon

position:802181:1
position: 802181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802346:1
position: 802346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:805940-806389:1:exon

position:805940:1
position: 805940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806389:1
position: 806389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:808572-808809:1:exon

position:808572:1
position: 808572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:808809:1
position: 808809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:812790-812992:1:exon

position:812790:1
position: 812790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:812992:1
position: 812992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:813894-814107:1:exon

position:813894:1
position: 813894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814107:1
position: 814107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:815993-816970:1:exon

position:815993:1
position: 815993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KLHL6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: KLHL6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: kelch-like protein 6
translation: MGDTLEKSSEDAEFSLDNECSTKKMGELVEVSSGEKIKFDDTGLSLVLQNGLENLRLENSLTDVILCVDSREFSCHRVVLAAASNYFRAMFCNDLREKYEEKIILKGVDAETMNILLDYTYTSKMLITKQNVQKVLEAASLFQFLRMVDACASFLTEALQPDNCVGILRLADAHSLHSLKQQVQNYIIQNFTQVLSYEEFLELPADVLCSTLKSDDLYVTEEAQVFETVMNWVRYKESERFPLLPSVLENVRLPLLDPWYFVETVEADQLIRQCPDVFPLLQEARMYHLSGNEIITERTKPRMHEFQSEVFMIIGGCTKDEKFVAEVTCLDPLRRSRLEVAKLPITEQETENENKKWVEFACITLKNEVYISGGKETQHDVWKYNASINKWIQIEYLNIGRWRHKMAVLGGKVYVIGGFDGMQRINSMEAYDPFHNCWSEAAPLMVNVSSFAAASYRKKLYVIGGGPNGKLATDKTQCYDPAANTWSLRAPMPVEAKCINAASFRDHIYVVGGAMKALYSYSPQEDTWCLVTQFTHERASCGISPCNNKLFITGGRDEKNEVIATVLCWDPETQKLTEECVLPRGVSHHGSVTLRKSYTHIRRIVPGAVSV
SIO_010081: KLHL6
subclass of: SO_0000673
so part of: KLHL6
location: join(798045..798307,802181..802346,805940..806389,808572..808809,812790..812992,813894..814107,815993..816295)
location: region:798045-816295:1
so has part: feature:798045-798307:1:exon
so has part: feature:802181-802346:1:exon
so has part: feature:805940-806389:1:exon
so has part: feature:808572-808809:1:exon
so has part: feature:812790-812992:1:exon
so has part: feature:813894-814107:1:exon
so has part: feature:815993-816295:1:exon

XP_003208985.2
type: Protein
SIO_000068: ncbiprotein

position:798045:1
position: 798045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816295:1
position: 816295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798045-798307:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802181-802346:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:805940-806389:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:808572-808809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:812790-812992:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:813894-814107:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:815993-816295:1:exon

GPR148
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GPR148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(820158..829030)
location: region:820158-829030:-1
so has part: feature:820158-829030:-1:exon
subclass of: SO_0000010

104912518
type: Gene
SIO_000068: ncbigene

position:820158:-1
position: 820158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829030:-1
position: 829030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820158-829030:-1:exon

GPR148
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GPR148
product: G protein-coupled receptor 148
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010716349.3
SIO_010081: GPR148
subclass of: SO_0000673
so part of: GPR148
location: complement(820158..829030)
location: region:820158-829030:-1
so has part: feature:820158-829030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:820158-829030:-1:exon

GPR148
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GPR148
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 148
translation: MSIFCTSVIRMNASLQRQSNISSDLEVSSYYLLEEWTLNTPDTNVKMFLIPPIICLVAGVLIIPSILFVIFSRFNIRQETRYMLLGNALLCDLLYLLLYTLSAVLSAAHVSLPKEACILQLFSLAVAYCGGLFTAAAMVLDTYIAILFPLRYIAILPSSRTRKVIVLLWLCSGALPGVFFLVLSSTHSFVPCVLEMCAIPVIILLTLSGTNAVKLSFWLSAMAIFLFLSLIFCCYGVLYFKTRRSGIWKSICSRASVTFLMHNTVFFFYFSPLLVLFVESFLYVNIVIGLQTSIWISLTICNVLMILPKVLFPFLYGLRYREISASLRSLVRIKRLHLVSPAPLPS
SIO_010081: GPR148
subclass of: SO_0000673
so part of: GPR148
location: complement(821009..822049)
location: region:821009-822049:-1
so has part: feature:821009-822049:-1:exon

XP_010714651.1
type: Protein
SIO_000068: ncbiprotein

position:821009:-1
position: 821009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822049:-1
position: 822049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821009-822049:-1:exon

AMER3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: AMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 838051..871926
location: region:838051-871926:1
so has part: feature:838051-871926:1:exon
subclass of: SO_0000010

104912519
type: Gene
SIO_000068: ncbigene

position:838051:1
position: 838051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:871926:1
position: 871926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838051-871926:1:exon

AMER3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: AMER3
product: APC membrane recruitment protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010716350.2
SIO_010081: AMER3
subclass of: SO_0000673
so part of: AMER3
location: join(838051..838162,844021..847016,871256..871926)
location: region:838051-871926:1
so has part: feature:838051-838162:1:exon
so has part: feature:844021-847016:1:exon
so has part: feature:871256-871926:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:838051-838162:1:exon

position:838162:1
position: 838162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:844021-847016:1:exon

position:844021:1
position: 844021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847016:1
position: 847016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:871256-871926:1:exon

position:871256:1
position: 871256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMER3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: AMER3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APC membrane recruitment protein 3
translation: MELKRGKTFIKSSVQHEKVPPAHTAPTSRDDVGKDKRAALEGNQSVAQVQLTCLATHKNYRFSSRAARSGAGENSLEKPSGASYKLVRKSKTHDCVSEADKSERCGPSSRACEEGFAAKGKGRLVNSASFSGVSSSTSKKECVVNPSPPACSSQMIDYRNFVPQMPFVPAVAKTIPRKRISLKRSKKGLRDIFHIKKSKPESFTFLVEKDKNPSSPGCKGEMPGRLAKSFFKTGETFAADCLSQDCSDNELQSDSSYDCCNALCEDVASLKSFDSLTGCGEIFADESSAHLELESSKEVLVRRSKHKESPVMGSFQGGVEQLASPGQNEAVEFAKFWDNINKSVRLHQSMLFDKKVLKVPDSERGKAGGQAAALATSPQTPPDKDGDNSKESSTETGTPKSDNQESISTSDEGYYDSFSPGQDDEVKEAQTPGVPGRFPRDSYSGDALYELFYDPNEVKINPVMDDDLCTSESISEQAIEIPLSIYSFHVGAEENMASQPGIDIISQGFFHSTWKGKECLLKLCDTELSLTMGIINWLRKHAGLVSSPDSLQSPRSQTENVMCNDSLITRSPSPEQVVSTEAQQEKKCKEESNSSHLRVFLDEGKAATQTSSENVAVRESYTHTDNVAFQGRTGSQHQDSPTVPGTVETTEASNCVPQSQVNGDNRHPSSTDDEKVTVSEGCQTSGGENPLTESLSRHSGSQSSENPLLNDNHDVESCYSYKTAATSPLDPLEKEDRSEVMYHSLSICNELLQPLGLGHFQGYISPTPRESSAGIVQLLEHCMTQMASLKISYDNKHLEDNCIGNDTNSIICKMSQYKNKLLLQNEFNCADQKPEYCNIPCTNQYNYETGFQDSSLYHLKQNGEKICSEDQKSRAKILDEVTRGKINFEYAQLNNKALSYLKDFTLELSAGDPAPTALSRPTFLPLPRAPAASPATHSLPIAPQPWGAEQHSLRPWGCMAGGAALCPRPEAAAPDSAVMGSSHP
SIO_010081: AMER3
subclass of: SO_0000673
so part of: AMER3
location: 844045..846999
location: region:844045-846999:1
so has part: feature:844045-846999:1:exon

XP_010714652.1
type: Protein
SIO_000068: ncbiprotein

position:844045:1
position: 844045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:846999:1
position: 846999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:844045-846999:1:exon

LOC109369404
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369404
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(851386..860835)
location: region:851386-860835:-1
so has part: feature:851386-860835:-1:exon
subclass of: SO_0000011

109369404
type: Gene
SIO_000068: ncbigene

position:851386:-1
position: 851386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860835:-1
position: 860835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851386-860835:-1:exon

LOC109369404
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369404
product: uncharacterized LOC109369404
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004160911.1
SIO_010081: LOC109369404
subclass of: SO_0000673
so part of: LOC109369404
location: complement(join(851386..851714,852074..860835))
location: region:851386-860835:-1
so has part: feature:852074-860835:-1:exon
so has part: feature:851386-851714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852074-860835:-1:exon

position:852074:-1
position: 852074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:851386-851714:-1:exon

position:851714:-1
position: 851714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104909282
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104909282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 882914..989410
location: region:882914-989410:1
so has part: feature:882914-989410:1:exon
subclass of: SO_0000010

104909282
type: Gene
SIO_000068: ncbigene

position:882914:1
position: 882914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:989410:1
position: 989410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882914-989410:1:exon

LOC104909282
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104909282
product: uncharacterized LOC104909282
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031555093.1
SIO_010081: LOC104909282
subclass of: SO_0000673
so part of: LOC104909282
location: join(882914..883528,974432..978823,982446..982772,987736..987865,988136..989410)
location: region:882914-989410:1
so has part: feature:882914-883528:1:exon
so has part: feature:974432-978823:1:exon
so has part: feature:982446-982772:1:exon
so has part: feature:987736-987865:1:exon
so has part: feature:988136-989410:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882914-883528:1:exon

position:883528:1
position: 883528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:974432-978823:1:exon

position:974432:1
position: 974432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978823:1
position: 978823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:982446-982772:1:exon

position:982446:1
position: 982446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982772:1
position: 982772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:987736-987865:1:exon

position:987736:1
position: 987736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:987865:1
position: 987865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:988136-989410:1:exon

position:988136:1
position: 988136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104909282
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104909282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104909282
translation: MEFNKCLGAEDEERRQEGGRDDINNVGSSIGSEELDLVQMYLTFLPERYVKAKSTLAVYLMCWLLLELCKSPEPADNYVSEGEFEDDLSSSGPSTIELEIRGSSQDTDEDYFETLSHQSGSLSDVKTELYESASETESVASDVTGETCLDSNCLFTEKTNLSCSVPTALCELKCSRQAEFSQQVQLDLSSKIEVAPSKNDFCTHTTKSECKAGVDDLALTSSTSNTGNQVSEESIISETDRKFIVGFQNKTEFDISKTQSCTNSVSTEDAVTRQKDCPAVLSIAFFRANSESCLILPEVQQLSFRSDVASSCSLPNLHFETNGPYHKSSTETSNYKCELESMSSVNCNRTSSAGNEETTSERVRHGSTEAMLSSHSVFYQHHFKSKPSTCEDTSSEIIGRKTWHSVPENISTQSEAEYLVNYIHPKDKFRWSCSRVHLQGLDFEYTWKNLGRVPVSSEKAVRVEGKFGIERFLLETNIDSNELSQPSGTFQCPDLYLHPEQEGSGLSPEEADTCMGRSSSTQTNECECNRKQKETSSTLGCEPVIINAQELSKNNQYKVERDLKADRFPSEINVEFGIDDTENIATCHVGFPAVVENGDCNWAVSCVGTGRRQQKCSKENVLESELSRIKVVIGERNADDPSNLDFGWKVLETTLQPGVSNTEIEHTDTTQQNTSCQTGALRSPSEPVENEYPTHPGKDGDSVFAVEMTPTLDSVNQRSHLMNQSELKSALIIISVEQKGLQSKTLNDDPCTETVTGTLRNVVRKDLVDLHIASKAHLEPERVLSEYCGCEESVLATSTGNAEPLHDGDTAEGKTDISQEQSKKVVSSFALTSSNSTVMSGKVEFSSVSAPLSNDVLIAENPADKCEEVLLKSDSRSSVMIFETEPHRAKTDLELETEQFRKPWAETKDDQVTKEEEFQAHQGREEDGYVTRVVVLETCSVSNLNEGDGSYEDLQEPSSTSEQVVGDEGCSRSNEPRGICEEPPPREAMEASPAENTASSRKDSAWNLDVSDVFNYSVKREARSACCMGLDNISTCSANSEEMDENSLHVLGSNSSLYKAVQKPTKNGNSGKASRFFIFSKMTSFRKTKPVTADNQGSSSVLGSGAKTEELEGGKEDEDTESLQSFKSCSSGSTFHRKESYASEYSDDDDLFYERPAGLFSRMSLRKASGSGRILMEDTDTNSTSPILPADKYADGLIPGSSESNDSEPVEYTRIRKSFPENEYKRNKNPEGKKFRTRLALAHKSLSSLFESKSPDKENTEQSSKISLKNEKDKAKLRQSAWKAFLKSKETDGLKRPILANLSPTQESINTTRGHLMRTASAEQQDGSDGHAFLKTETANGSSLDTNYFDTSVEPVNVSSPTGMWRKRLQSHDLGIRYSQSSDCDETQEALGNSFNASLEECWMKSPFSPSDVQLPFNQSSPSCPQLSNSEGKDMPCRPMSPKPQSPRSTSQRKSFRYPGRICATSMISLGNSSAVDCGLEAPERPKTLKPRGSLLLSVHSLDNDYQRDDSGISSQSQISLNTASSISDVLRDEDSKQQCPTPPEKRPNEKGVPHRKRRSPQVPTSPRPFSTLENKAWRLSFLAPDEKAKEIPESRRKRPKSLYKCFSFDDIWMQRNQKRKLEKETQPERGTQLQHFPEDQLKAGRSPSITSTIALDILPLKLHPFSQSTPTGLDCVGWKRRVTFPGFYRLPAVYLLESAYGRYGELLIRN
SIO_010081: LOC104909282
subclass of: SO_0000673
so part of: LOC104909282
location: join(883319..883528,974432..978823,982446..982772,987736..987865,988136..988212)
location: region:883319-988212:1
so has part: feature:883319-883528:1:exon
so has part: feature:974432-978823:1:exon
so has part: feature:982446-982772:1:exon
so has part: feature:987736-987865:1:exon
so has part: feature:988136-988212:1:exon

XP_031410953.1
type: Protein
SIO_000068: ncbiprotein

position:883319:1
position: 883319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988212:1
position: 988212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883319-883528:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974432-978823:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982446-982772:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:987736-987865:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988136-988212:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1001523..1001622
location: region:1001523-1001622:1
so has part: feature:1001523-1001622:1:region

position:1001523:1
position: 1001523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1001622:1
position: 1001622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1001523-1001622:1:region

LOC104909213
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104909213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1002113..1003389
location: region:1002113-1003389:1
so has part: feature:1002113-1003389:1:exon
subclass of: SO_0000010

104909213
type: Gene
SIO_000068: ncbigene

position:1002113:1
position: 1002113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003389:1
position: 1003389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002113-1003389:1:exon

LOC104909213
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104909213
product: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010716354.3
SIO_010081: LOC104909213
subclass of: SO_0000673
so part of: LOC104909213
location: join(1002113..1002285,1002368..1002456,1002710..1002834,1003009..1003057,1003175..1003179,1003267..1003389)
location: region:1002113-1003389:1
so has part: feature:1002113-1002285:1:exon
so has part: feature:1002368-1002456:1:exon
so has part: feature:1002710-1002834:1:exon
so has part: feature:1003009-1003057:1:exon
so has part: feature:1003175-1003179:1:exon
so has part: feature:1003267-1003389:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002113-1002285:1:exon

position:1002285:1
position: 1002285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1002368-1002456:1:exon

position:1002368:1
position: 1002368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002456:1
position: 1002456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1002710-1002834:1:exon

position:1002710:1
position: 1002710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1002834:1
position: 1002834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1003009-1003057:1:exon

position:1003009:1
position: 1003009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003057:1
position: 1003057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1003175-1003179:1:exon

position:1003175:1
position: 1003175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003179:1
position: 1003179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1003267-1003389:1:exon

position:1003267:1
position: 1003267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104909213
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104909213
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial-like
translation: MASGAAEPKRRSFETLRVMPVQEHVLHVELNRPEKRNAMNIAFWREMVECFQDISQDPSCHAVVISGVGPIFTAGIDLVDMGNDFLTVDGEDTARKAWQLQQKIRAYQESFTVLEKCPKPVIAAVHGACIGGGGENYDDPHKTPASPVVHIRGLIDGVVEADLVEALQEFGPIR
SIO_010081: LOC104909213
subclass of: SO_0000673
so part of: LOC104909213
location: join(1002152..1002285,1002368..1002456,1002710..1002834,1003009..1003057,1003175..1003179,1003267..1003389)
location: region:1002152-1003389:1
so has part: feature:1002152-1002285:1:exon
so has part: feature:1002368-1002456:1:exon
so has part: feature:1002710-1002834:1:exon
so has part: feature:1003009-1003057:1:exon
so has part: feature:1003175-1003179:1:exon
so has part: feature:1003267-1003389:1:exon

XP_010714656.1
type: Protein
SIO_000068: ncbiprotein

position:1002152:1
position: 1002152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002152-1002285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1002368-1002456:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1002710-1002834:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1003009-1003057:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1003175-1003179:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1003267-1003389:1:exon

HNRNPL
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HNRNPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1003225..1007935
location: region:1003225-1007935:1
so has part: feature:1003225-1007935:1:exon
subclass of: SO_0000010

100544766
type: Gene
SIO_000068: ncbigene

position:1003225:1
position: 1003225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007935:1
position: 1007935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003225-1007935:1:exon

HNRNPL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HNRNPL
product: heterogeneous nuclear ribonucleoprotein L
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010716353.3
SIO_010081: HNRNPL
subclass of: SO_0000673
so part of: HNRNPL
location: join(1003225..1003385,1003462..1003699,1003891..1003976,1004299..1004395,1004478..1004550,1006809..1006880,1006978..1007253,1007365..1007486,1007564..1007935)
location: region:1003225-1007935:1
so has part: feature:1003225-1003385:1:exon
so has part: feature:1003462-1003699:1:exon
so has part: feature:1003891-1003976:1:exon
so has part: feature:1004299-1004395:1:exon
so has part: feature:1004478-1004550:1:exon
so has part: feature:1006809-1006880:1:exon
so has part: feature:1006978-1007253:1:exon
so has part: feature:1007365-1007486:1:exon
so has part: feature:1007564-1007935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1003225-1003385:1:exon

position:1003385:1
position: 1003385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1003462-1003699:1:exon

position:1003462:1
position: 1003462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003699:1
position: 1003699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1003891-1003976:1:exon

position:1003891:1
position: 1003891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1003976:1
position: 1003976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1004299-1004395:1:exon

position:1004299:1
position: 1004299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004395:1
position: 1004395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1004478-1004550:1:exon

position:1004478:1
position: 1004478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1004550:1
position: 1004550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1006809-1006880:1:exon

position:1006809:1
position: 1006809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1006880:1
position: 1006880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1006978-1007253:1:exon

position:1006978:1
position: 1006978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007253:1
position: 1007253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1007365-1007486:1:exon

position:1007365:1
position: 1007365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007486:1
position: 1007486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1007564-1007935:1:exon

position:1007564:1
position: 1007564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HNRNPL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HNRNPL
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein L
translation: MPKKRQALVEFEDILGACNAVNYAADNQIYIAGHPAFVNYSTSQKISRPGDSDDSRGVNNVLLFTILNPIYSITTDVLYTICNPCGPVQRIVIFRKNGVQAMVEFDSVQSAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQGDPGGNPNKRQRQPPLLGDHPAEYGGPHGGYHGHYHDEGYGPPPPHYEGRRMGPQLXGHRRGPSRYGPQYGHPHPTAAPEYGPHADSPVLMVYGLDQSKMNCDRVFNIFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAITHLNNNFMFGQKLNVCVSKQQAIMPGQSYGLEDGSCSYKDFSGSRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFYEVGCPLSGFGAVFCILLGFEILFFSFPVCL
SIO_010081: HNRNPL
subclass of: SO_0000673
so part of: HNRNPL
location: join(1003475..1003699,1003891..1003976,1004299..1004395,1004478..1004550,1006809..1006880,1006978..1007253,1007365..1007486,1007564..1007855)
location: region:1003475-1007855:1
so has part: feature:1003475-1003699:1:exon
so has part: feature:1003891-1003976:1:exon
so has part: feature:1004299-1004395:1:exon
so has part: feature:1004478-1004550:1:exon
so has part: feature:1006809-1006880:1:exon
so has part: feature:1006978-1007253:1:exon
so has part: feature:1007365-1007486:1:exon
so has part: feature:1007564-1007855:1:exon

XP_010714655.1
type: Protein
SIO_000068: ncbiprotein

position:1003475:1
position: 1003475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1007855:1
position: 1007855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003475-1003699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1003891-1003976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1004299-1004395:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1004478-1004550:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1006809-1006880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1006978-1007253:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1007365-1007486:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1007564-1007855:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1008516..1008615
location: region:1008516-1008615:1
so has part: feature:1008516-1008615:1:region

position:1008516:1
position: 1008516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1008615:1
position: 1008615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1008516-1008615:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1009193..1009292
location: region:1009193-1009292:1
so has part: feature:1009193-1009292:1:region

position:1009193:1
position: 1009193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1009292:1
position: 1009292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009193-1009292:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1010055..1010154
location: region:1010055-1010154:1
so has part: feature:1010055-1010154:1:region

position:1010055:1
position: 1010055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010154:1
position: 1010154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010055-1010154:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1010876..1010975
location: region:1010876-1010975:1
so has part: feature:1010876-1010975:1:region

position:1010876:1
position: 1010876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010975:1
position: 1010975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1010876-1010975:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1012197..1012296
location: region:1012197-1012296:1
so has part: feature:1012197-1012296:1:region

position:1012197:1
position: 1012197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1012296:1
position: 1012296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012197-1012296:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1012904..1013003
location: region:1012904-1013003:1
so has part: feature:1012904-1013003:1:region

position:1012904:1
position: 1012904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013003:1
position: 1013003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012904-1013003:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1013874..1013973
location: region:1013874-1013973:1
so has part: feature:1013874-1013973:1:region

position:1013874:1
position: 1013874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013973:1
position: 1013973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013874-1013973:1:region

LOC104912521
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912521
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1026959..1030051)
location: region:1026959-1030051:-1
so has part: feature:1026959-1030051:-1:exon
subclass of: SO_0000011

104912521
type: Gene
SIO_000068: ncbigene

position:1026959:-1
position: 1026959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1030051:-1
position: 1030051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026959-1030051:-1:exon

LOC104912521
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912521
product: uncharacterized LOC104912521
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002118393.1
SIO_010081: LOC104912521
subclass of: SO_0000673
so part of: LOC104912521
location: complement(join(1026959..1027004,1027093..1027203,1027325..1027534,1027715..1028658,1029862..1030051))
location: region:1026959-1030051:-1
so has part: feature:1029862-1030051:-1:exon
so has part: feature:1027715-1028658:-1:exon
so has part: feature:1027325-1027534:-1:exon
so has part: feature:1027093-1027203:-1:exon
so has part: feature:1026959-1027004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1029862-1030051:-1:exon

position:1029862:-1
position: 1029862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1027715-1028658:-1:exon

position:1027715:-1
position: 1027715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1028658:-1
position: 1028658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1027325-1027534:-1:exon

position:1027325:-1
position: 1027325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027534:-1
position: 1027534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1027093-1027203:-1:exon

position:1027093:-1
position: 1027093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1027203:-1
position: 1027203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1026959-1027004:-1:exon

position:1027004:-1
position: 1027004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912520
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1030202..1033121)
location: region:1030202-1033121:-1
so has part: feature:1030202-1033121:-1:exon
subclass of: SO_0000010

104912520
type: Gene
SIO_000068: ncbigene

position:1030202:-1
position: 1030202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033121:-1
position: 1033121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030202-1033121:-1:exon

LOC104912520
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912520
product: rho GTPase-activating protein 32-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_010716355.2
SIO_010081: LOC104912520
subclass of: SO_0000673
so part of: LOC104912520
location: complement(join(1030202..1031136,1031282..1031427,1032240..1032441,1032932..1033121))
location: region:1030202-1033121:-1
so has part: feature:1032932-1033121:-1:exon
so has part: feature:1032240-1032441:-1:exon
so has part: feature:1031282-1031427:-1:exon
so has part: feature:1030202-1031136:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1032932-1033121:-1:exon

position:1032932:-1
position: 1032932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1032240-1032441:-1:exon

position:1032240:-1
position: 1032240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1032441:-1
position: 1032441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1031282-1031427:-1:exon

position:1031282:-1
position: 1031282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1031427:-1
position: 1031427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1030202-1031136:-1:exon

position:1031136:-1
position: 1031136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912520
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912520
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho GTPase-activating protein 32-like
translation: MSPKTCLLYRSQQNESACASGRAACMELQTQSAVVEFIIDHTDVLFRSKSGSDVAGGAGPSSLSGPKSVWVSSPATELLTLEEAQARRRGHSSSPVVTQSRDVEVEGGPAAVQGKFHTILDFPSERQSPAGKMKESPAGSGCSCFSLRKPSSVAKRQLQRRPREPSETQVVGLAGESSPCQPIGSRASSDGALCASLNGELLGSTNRCGSDDSLPQTNSDGEKELIQVHALISPGSAEDADPSQPASAVTSLDRDPAPLQCSPAPAQPGCPDSSASMGEQVSIREEKPSLVEGDLESGLQPQAPGSSSLSHSLRDKGG
SIO_010081: LOC104912520
subclass of: SO_0000673
so part of: LOC104912520
location: complement(join(1030703..1031136,1031282..1031427,1032240..1032441,1032932..1033106))
location: region:1030703-1033106:-1
so has part: feature:1032932-1033106:-1:exon
so has part: feature:1032240-1032441:-1:exon
so has part: feature:1031282-1031427:-1:exon
so has part: feature:1030703-1031136:-1:exon

XP_010714657.2
type: Protein
SIO_000068: ncbiprotein

position:1030703:-1
position: 1030703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1033106:-1
position: 1033106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1032932-1033106:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1032240-1032441:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031282-1031427:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1030703-1031136:-1:exon

LOC116217041
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217041
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1039173..1042565)
location: region:1039173-1042565:-1
so has part: feature:1039173-1042565:-1:exon
subclass of: SO_0000011

116217041
type: Gene
SIO_000068: ncbigene

position:1039173:-1
position: 1039173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1042565:-1
position: 1042565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1039173-1042565:-1:exon

LOC116217041
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217041
product: uncharacterized LOC116217041, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004160913.1
SIO_010081: LOC116217041
subclass of: SO_0000673
so part of: LOC116217041
location: complement(join(1039173..1039628,1040087..1040164,1040824..1040914,1041054..1042565))
location: region:1039173-1042565:-1
so has part: feature:1041054-1042565:-1:exon
so has part: feature:1040824-1040914:-1:exon
so has part: feature:1040087-1040164:-1:exon
so has part: feature:1039173-1039628:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1041054-1042565:-1:exon

position:1041054:-1
position: 1041054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1040824-1040914:-1:exon

position:1040824:-1
position: 1040824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040914:-1
position: 1040914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1040087-1040164:-1:exon

position:1040087:-1
position: 1040087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040164:-1
position: 1040164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1039173-1039628:-1:exon

position:1039628:-1
position: 1039628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217041
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217041
product: uncharacterized LOC116217041, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004160912.1
SIO_010081: LOC116217041
subclass of: SO_0000673
so part of: LOC116217041
location: complement(join(1039176..1039628,1040087..1040164,1040824..1040914,1041171..1042565))
location: region:1039176-1042565:-1
so has part: feature:1041171-1042565:-1:exon
so has part: feature:1040824-1040914:-1:exon
so has part: feature:1040087-1040164:-1:exon
so has part: feature:1039176-1039628:-1:exon

position:1039176:-1
position: 1039176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041171-1042565:-1:exon

position:1041171:-1
position: 1041171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1040824-1040914:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1040087-1040164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1039176-1039628:-1:exon

LOC104912522
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912522
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1051970..1054547)
location: region:1051970-1054547:-1
so has part: feature:1051970-1054547:-1:exon
subclass of: SO_0000011

104912522
type: Gene
SIO_000068: ncbigene

position:1051970:-1
position: 1051970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054547:-1
position: 1054547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051970-1054547:-1:exon

LOC104912522
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912522
product: uncharacterized LOC104912522
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004160914.1
SIO_010081: LOC104912522
subclass of: SO_0000673
so part of: LOC104912522
location: complement(join(1051970..1052049,1052182..1052867,1052967..1053071,1053311..1053414,1053508..1054547))
location: region:1051970-1054547:-1
so has part: feature:1053508-1054547:-1:exon
so has part: feature:1053311-1053414:-1:exon
so has part: feature:1052967-1053071:-1:exon
so has part: feature:1052182-1052867:-1:exon
so has part: feature:1051970-1052049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1053508-1054547:-1:exon

position:1053508:-1
position: 1053508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1053311-1053414:-1:exon

position:1053311:-1
position: 1053311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053414:-1
position: 1053414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1052967-1053071:-1:exon

position:1052967:-1
position: 1052967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1053071:-1
position: 1053071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1052182-1052867:-1:exon

position:1052182:-1
position: 1052182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052867:-1
position: 1052867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1051970-1052049:-1:exon

position:1052049:-1
position: 1052049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1054597..1054696
location: region:1054597-1054696:1
so has part: feature:1054597-1054696:1:region

position:1054597:1
position: 1054597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054696:1
position: 1054696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054597-1054696:1:region

LOC104912523
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1054936..1064061)
location: region:1054936-1064061:-1
so has part: feature:1054936-1064061:-1:exon
subclass of: SO_0000010

104912523
type: Gene
SIO_000068: ncbigene

position:1054936:-1
position: 1054936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064061:-1
position: 1064061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054936-1064061:-1:exon

LOC104912523
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912523
product: zonadhesin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010716356.2
SIO_010081: LOC104912523
subclass of: SO_0000673
so part of: LOC104912523
location: complement(join(1054936..1055090,1056195..1056372,1056667..1056914,1057680..1057766,1058075..1058158,1058539..1058619,1058739..1058823,1058916..1059172,1059784..1059935,1060425..1060644,1062712..1062888,1063456..1063599,1063920..1064061))
location: region:1054936-1064061:-1
so has part: feature:1063920-1064061:-1:exon
so has part: feature:1063456-1063599:-1:exon
so has part: feature:1062712-1062888:-1:exon
so has part: feature:1060425-1060644:-1:exon
so has part: feature:1059784-1059935:-1:exon
so has part: feature:1058916-1059172:-1:exon
so has part: feature:1058739-1058823:-1:exon
so has part: feature:1058539-1058619:-1:exon
so has part: feature:1058075-1058158:-1:exon
so has part: feature:1057680-1057766:-1:exon
so has part: feature:1056667-1056914:-1:exon
so has part: feature:1056195-1056372:-1:exon
so has part: feature:1054936-1055090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063920-1064061:-1:exon

position:1063920:-1
position: 1063920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1063456-1063599:-1:exon

position:1063456:-1
position: 1063456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1063599:-1
position: 1063599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1062712-1062888:-1:exon

position:1062712:-1
position: 1062712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1062888:-1
position: 1062888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1060425-1060644:-1:exon

position:1060425:-1
position: 1060425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1060644:-1
position: 1060644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1059784-1059935:-1:exon

position:1059784:-1
position: 1059784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059935:-1
position: 1059935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1058916-1059172:-1:exon

position:1058916:-1
position: 1058916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1059172:-1
position: 1059172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1058739-1058823:-1:exon

position:1058739:-1
position: 1058739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058823:-1
position: 1058823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1058539-1058619:-1:exon

position:1058539:-1
position: 1058539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058619:-1
position: 1058619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1058075-1058158:-1:exon

position:1058075:-1
position: 1058075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058158:-1
position: 1058158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1057680-1057766:-1:exon

position:1057680:-1
position: 1057680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1057766:-1
position: 1057766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1056667-1056914:-1:exon

position:1056667:-1
position: 1056667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056914:-1
position: 1056914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1056195-1056372:-1:exon

position:1056195:-1
position: 1056195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1056372:-1
position: 1056372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1054936-1055090:-1:exon

position:1055090:-1
position: 1055090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912523
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zonadhesin-like
translation: MGLSNNTGQQAAARSSLFIAAGGAWVRDGFRLRARSGPRWQQQDGRRDPVVRDVHKHFILFAFTRCSIGTEDQCDAVLESEAKKNTACGMITDPTGIFKDCHNKVPPENFFNNCVYDMCFTEGQATSLCYGLQAYAESCISAGICIEWRNATLCPMSCPGGSIYKGCGTRCPSTCVSSSASNTCSSLPVEGCFCKDGYVLSGDTCVPESNCGCVDDKNHYHEASYRRHFPSSLSISPARLMLTSASGSREPSSSIDWIRHKGPTPSPDTGPSFDHTTGDGYYIYLHGDDPYPGFVSQLVSPVCNSTGPHCFRFWYHMYGVAETMALRVYVAQDGELLEVWKSVGNHGDRWILGEVTVHSTGNLQLVLEGEWGEDFRSDVALDDLSIEQGYCPGDVTPTPRPGTTTPGTGTSTPTPQPGSGPSTPKPGTPSPDITTPPPHPTTTTPSSGPSTPKPGTPSPDITTPPAQTPSTPHPSSGHASCSASGDPHYNTFDHRVHNFMGNCSYTLSKVCNISQNIPYFDVSTTNEHRGSNTKVSYVKSVQVEVYGYQISMLKSKKVNVNGSRMNLPIFIEKKISIQNSGGYVLLETDFGLWVRYDGNHYAEVSVPSDYSGLLCGLCGNYNGDPNDDNIKPNGDIASNSNELGQSWLVPENNTMYVQESNHIC
SIO_010081: LOC104912523
subclass of: SO_0000673
so part of: LOC104912523
location: complement(join(1054951..1055090,1056195..1056372,1056667..1056914,1057680..1057766,1058075..1058158,1058539..1058619,1058739..1058823,1058916..1059172,1059784..1059935,1060425..1060644,1062712..1062888,1063456..1063599,1063920..1064061))
location: region:1054951-1064061:-1
so has part: feature:1063920-1064061:-1:exon
so has part: feature:1063456-1063599:-1:exon
so has part: feature:1062712-1062888:-1:exon
so has part: feature:1060425-1060644:-1:exon
so has part: feature:1059784-1059935:-1:exon
so has part: feature:1058916-1059172:-1:exon
so has part: feature:1058739-1058823:-1:exon
so has part: feature:1058539-1058619:-1:exon
so has part: feature:1058075-1058158:-1:exon
so has part: feature:1057680-1057766:-1:exon
so has part: feature:1056667-1056914:-1:exon
so has part: feature:1056195-1056372:-1:exon
so has part: feature:1054951-1055090:-1:exon

XP_010714658.2
type: Protein
SIO_000068: ncbiprotein

position:1054951:-1
position: 1054951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063920-1064061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1063456-1063599:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1062712-1062888:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060425-1060644:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1059784-1059935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1058916-1059172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1058739-1058823:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1058539-1058619:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1058075-1058158:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1057680-1057766:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1056667-1056914:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1056195-1056372:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1054951-1055090:-1:exon

LOC100547689
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100547689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1066887..1080996)
location: region:1066887-1080996:-1
so has part: feature:1066887-1080996:-1:exon
subclass of: SO_0000010

100547689
type: Gene
SIO_000068: ncbigene

position:1066887:-1
position: 1066887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080996:-1
position: 1080996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1066887-1080996:-1:exon

LOC100547689
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100547689
product: zonadhesin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_003209120.4
SIO_010081: LOC100547689
subclass of: SO_0000673
so part of: LOC100547689
location: complement(join(1066887..1067083,1067409..1067523,1068103..1068234,1068547..1068685,1069610..1069809,1070552..1070682,1071671..1071847,1073061..1073226,1073940..1074069,1074687..1074937,1076190..1076331,1076748..1076956,1077609..1077877,1078627..1078751,1079178..1079342,1079846..1080084,1080837..1080996))
location: region:1066887-1080996:-1
so has part: feature:1080837-1080996:-1:exon
so has part: feature:1079846-1080084:-1:exon
so has part: feature:1079178-1079342:-1:exon
so has part: feature:1078627-1078751:-1:exon
so has part: feature:1077609-1077877:-1:exon
so has part: feature:1076748-1076956:-1:exon
so has part: feature:1076190-1076331:-1:exon
so has part: feature:1074687-1074937:-1:exon
so has part: feature:1073940-1074069:-1:exon
so has part: feature:1073061-1073226:-1:exon
so has part: feature:1071671-1071847:-1:exon
so has part: feature:1070552-1070682:-1:exon
so has part: feature:1069610-1069809:-1:exon
so has part: feature:1068547-1068685:-1:exon
so has part: feature:1068103-1068234:-1:exon
so has part: feature:1067409-1067523:-1:exon
so has part: feature:1066887-1067083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1080837-1080996:-1:exon

position:1080837:-1
position: 1080837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1079846-1080084:-1:exon

position:1079846:-1
position: 1079846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080084:-1
position: 1080084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1079178-1079342:-1:exon

position:1079178:-1
position: 1079178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1079342:-1
position: 1079342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1078627-1078751:-1:exon

position:1078627:-1
position: 1078627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1078751:-1
position: 1078751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1077609-1077877:-1:exon

position:1077609:-1
position: 1077609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1077877:-1
position: 1077877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1076748-1076956:-1:exon

position:1076748:-1
position: 1076748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076956:-1
position: 1076956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1076190-1076331:-1:exon

position:1076190:-1
position: 1076190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1076331:-1
position: 1076331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1074687-1074937:-1:exon

position:1074687:-1
position: 1074687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074937:-1
position: 1074937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1073940-1074069:-1:exon

position:1073940:-1
position: 1073940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074069:-1
position: 1074069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1073061-1073226:-1:exon

position:1073061:-1
position: 1073061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1073226:-1
position: 1073226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1071671-1071847:-1:exon

position:1071671:-1
position: 1071671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1071847:-1
position: 1071847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1070552-1070682:-1:exon

position:1070552:-1
position: 1070552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070682:-1
position: 1070682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1069610-1069809:-1:exon

position:1069610:-1
position: 1069610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1069809:-1
position: 1069809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1068547-1068685:-1:exon

position:1068547:-1
position: 1068547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068685:-1
position: 1068685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1068103-1068234:-1:exon

position:1068103:-1
position: 1068103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1068234:-1
position: 1068234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1067409-1067523:-1:exon

position:1067409:-1
position: 1067409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1067523:-1
position: 1067523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1066887-1067083:-1:exon

position:1067083:-1
position: 1067083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100547689
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100547689
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zonadhesin-like
translation: MYTFVGTCTYTLVKSVSYNVNPITILGKNEDRGLRGATYLKEVYIDVYGTRITLRKSKEILLNNERVYTPVENRVRGVSIGNIGNYLVVETDFGVIVKYDGDDHLEITLPQSYFSKVQGMCGNFNDNYKDDLSLPNGTIVSVTQFGNSWKVEEDSDAGCLSDSREDDVPPCTDENKPIIESQCNVLKSDKFKACHDLVNPEDFIKICTYDMCRYDGMKSALCDIVQFYVDTCRNQGITITWRNSTFCPLPCPSHSHYTACASACPSTCNDIFASSLCEKTESCTEGCECDDNYVLSNDKCVPLSNCGCRDDDNNYYSVGETWITPHCTERCQCQQNGVIKCQSYGCDSKETCLIKSGKYKCNPTGFGKCRIIGDPHYITFDGLVHHFQGKYTYILTQTIPDLPDTLTQFSVEGMNYPLRLNRRITYLKEVIINVYNHEVRFRQGKQILLDGVRVRAPVRPHDGIRIYQRTTRIYLETDFGLYLSYDGDQNADIKLANTYNNRVEGLCGDFDGRSRNDFTNPDGVWLKNVNAFGESWKVPVKRTSRFRRETTVEDEPDEEPDTGLYQGCSENKLMQENSTSKCQILTALDGPFANCHSEVPPEPYSMNCVFDMCVEEDAAETLCRHLKEYVLACQEQGVNMEGWRQQTACEMSCPPNSKYNSCMTACPASCSDMTSPSECESPCVEGCECLPGYVLSDSDCVPYRECGCTYLDKYYEIGEVFTTDDCSQKCQCTESSTVTCSNIVCGSDEICNIANYTRGCYRTGPCMPSPCQNDGICSETTNGTSDNYYCECTELYTGQSCNIERIDDTSIPESSQSNTVAIAVGVTVAVVAVVILVTSAVYLFRRRRKADANINARNSSLHESEDTSGDRVREHNYGYVVNAAFDQDEPQSTHL
SIO_010081: LOC100547689
subclass of: SO_0000673
so part of: LOC100547689
location: complement(join(1066930..1067083,1067409..1067523,1068103..1068234,1068547..1068685,1069610..1069809,1070552..1070682,1071671..1071847,1073061..1073226,1073940..1074069,1074687..1074937,1076190..1076331,1076748..1076956,1077609..1077877,1078627..1078751,1079178..1079342,1079846..1080028))
location: region:1066930-1080028:-1
so has part: feature:1079846-1080028:-1:exon
so has part: feature:1079178-1079342:-1:exon
so has part: feature:1078627-1078751:-1:exon
so has part: feature:1077609-1077877:-1:exon
so has part: feature:1076748-1076956:-1:exon
so has part: feature:1076190-1076331:-1:exon
so has part: feature:1074687-1074937:-1:exon
so has part: feature:1073940-1074069:-1:exon
so has part: feature:1073061-1073226:-1:exon
so has part: feature:1071671-1071847:-1:exon
so has part: feature:1070552-1070682:-1:exon
so has part: feature:1069610-1069809:-1:exon
so has part: feature:1068547-1068685:-1:exon
so has part: feature:1068103-1068234:-1:exon
so has part: feature:1067409-1067523:-1:exon
so has part: feature:1066930-1067083:-1:exon

XP_003209168.2
type: Protein
SIO_000068: ncbiprotein

position:1066930:-1
position: 1066930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1080028:-1
position: 1080028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079846-1080028:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1079178-1079342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1078627-1078751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1077609-1077877:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1076748-1076956:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1076190-1076331:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1074687-1074937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1073940-1074069:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1073061-1073226:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071671-1071847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1070552-1070682:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1069610-1069809:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1068547-1068685:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1068103-1068234:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1067409-1067523:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1066930-1067083:-1:exon

LOC104912525
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1081409..1091048
location: region:1081409-1091048:1
so has part: feature:1081409-1091048:1:exon
subclass of: SO_0000010

104912525
type: Gene
SIO_000068: ncbigene

position:1081409:1
position: 1081409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1091048:1
position: 1091048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081409-1091048:1:exon

LOC104912525
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912525
product: probable cation-transporting ATPase 13A4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_010716357.3
SIO_010081: LOC104912525
subclass of: SO_0000673
so part of: LOC104912525
location: join(1081409..1081882,1083169..1083211,1083702..1083811,1084161..1084257,1085009..1085081,1086233..1086407,1086596..1086810,1087548..1087636,1088840..1088920,1089369..1091048)
location: region:1081409-1091048:1
so has part: feature:1081409-1081882:1:exon
so has part: feature:1083169-1083211:1:exon
so has part: feature:1083702-1083811:1:exon
so has part: feature:1084161-1084257:1:exon
so has part: feature:1085009-1085081:1:exon
so has part: feature:1086233-1086407:1:exon
so has part: feature:1086596-1086810:1:exon
so has part: feature:1087548-1087636:1:exon
so has part: feature:1088840-1088920:1:exon
so has part: feature:1089369-1091048:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1081409-1081882:1:exon

position:1081882:1
position: 1081882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1083169-1083211:1:exon

position:1083169:1
position: 1083169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083211:1
position: 1083211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1083702-1083811:1:exon

position:1083702:1
position: 1083702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1083811:1
position: 1083811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1084161-1084257:1:exon

position:1084161:1
position: 1084161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084257:1
position: 1084257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1085009-1085081:1:exon

position:1085009:1
position: 1085009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085081:1
position: 1085081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1086233-1086407:1:exon

position:1086233:1
position: 1086233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086407:1
position: 1086407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1086596-1086810:1:exon

position:1086596:1
position: 1086596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086810:1
position: 1086810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1087548-1087636:1:exon

position:1087548:1
position: 1087548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087636:1
position: 1087636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1088840-1088920:1:exon

position:1088840:1
position: 1088840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088920:1
position: 1088920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1089369-1091048:1:exon

position:1089369:1
position: 1089369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912525
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912525
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cation-transporting ATPase 13A4
translation: MSPSQKSSLVEEFQKLDYFVGMCGDGANDCGALKVAHAGISLSEQEASVASPFTSQTPSIACVPELIREGRAALVTSFCMFKYMALYSTIQYLGVLLLYWQLNSFGNYQFLFQDLAITTVIGMTMSFTEAYPKLVPYRPPSQLISPPLLLSVILNILFSLGMQIFGFLMVQKQPWYSKTDIHSACLSVNSQMENSSSASRLVLHDVRDGDPTEVDNGYKSYENTTVWLLSTINCLIIALVFSKGRPFRQPIYTNYVFVLVLVGQLGVCLFLVFADIDDLYSKMDLVCTPTTWRISMVMMLAVTLAVSFLVEEAIIENKALWLLLKMTFQYHSKSRYKRLQQVLEQDSAWPPLNETFFSDSVAVSVEEDMGGHTNPTFDSNEDAL
SIO_010081: LOC104912525
subclass of: SO_0000673
so part of: LOC104912525
location: join(1081833..1081882,1083169..1083211,1083702..1083811,1084161..1084257,1085009..1085081,1086233..1086407,1086596..1086810,1087548..1087636,1088840..1088920,1089369..1089590)
location: region:1081833-1089590:1
so has part: feature:1081833-1081882:1:exon
so has part: feature:1083169-1083211:1:exon
so has part: feature:1083702-1083811:1:exon
so has part: feature:1084161-1084257:1:exon
so has part: feature:1085009-1085081:1:exon
so has part: feature:1086233-1086407:1:exon
so has part: feature:1086596-1086810:1:exon
so has part: feature:1087548-1087636:1:exon
so has part: feature:1088840-1088920:1:exon
so has part: feature:1089369-1089590:1:exon

XP_010714659.1
type: Protein
SIO_000068: ncbiprotein

position:1081833:1
position: 1081833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089590:1
position: 1089590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081833-1081882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1083169-1083211:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1083702-1083811:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1084161-1084257:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1085009-1085081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086233-1086407:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1086596-1086810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1087548-1087636:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1088840-1088920:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1089369-1089590:1:exon

ATP13A5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ATP13A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1095252..1123185
location: region:1095252-1123185:1
so has part: feature:1095252-1123185:1:exon
subclass of: SO_0000010

100547379
type: Gene
SIO_000068: ncbigene

position:1095252:1
position: 1095252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123185:1
position: 1123185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095252-1123185:1:exon

ATP13A5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ATP13A5
product: ATPase 13A5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003209118.4
SIO_010081: ATP13A5
subclass of: SO_0000673
so part of: ATP13A5
location: join(1095252..1095471,1099304..1099477,1100442..1100588,1100814..1100884,1100960..1101040,1101596..1101665,1102934..1103068,1104329..1104401,1105192..1105323,1105950..1106120,1106253..1106410,1106666..1106854,1107130..1107191,1109527..1109677,1110673..1110756,1111671..1111827,1113219..1113336,1113878..1114002,1114102..1114265,1114915..1115037,1115791..1115870,1116083..1116125,1116881..1116990,1118017..1118113,1118686..1118758,1118934..1119108,1119811..1120001,1120947..1121035,1121597..1121677,1122177..1123185)
location: region:1095252-1123185:1
so has part: feature:1095252-1095471:1:exon
so has part: feature:1099304-1099477:1:exon
so has part: feature:1100442-1100588:1:exon
so has part: feature:1100814-1100884:1:exon
so has part: feature:1100960-1101040:1:exon
so has part: feature:1101596-1101665:1:exon
so has part: feature:1102934-1103068:1:exon
so has part: feature:1104329-1104401:1:exon
so has part: feature:1105192-1105323:1:exon
so has part: feature:1105950-1106120:1:exon
so has part: feature:1106253-1106410:1:exon
so has part: feature:1106666-1106854:1:exon
so has part: feature:1107130-1107191:1:exon
so has part: feature:1109527-1109677:1:exon
so has part: feature:1110673-1110756:1:exon
so has part: feature:1111671-1111827:1:exon
so has part: feature:1113219-1113336:1:exon
so has part: feature:1113878-1114002:1:exon
so has part: feature:1114102-1114265:1:exon
so has part: feature:1114915-1115037:1:exon
so has part: feature:1115791-1115870:1:exon
so has part: feature:1116083-1116125:1:exon
so has part: feature:1116881-1116990:1:exon
so has part: feature:1118017-1118113:1:exon
so has part: feature:1118686-1118758:1:exon
so has part: feature:1118934-1119108:1:exon
so has part: feature:1119811-1120001:1:exon
so has part: feature:1120947-1121035:1:exon
so has part: feature:1121597-1121677:1:exon
so has part: feature:1122177-1123185:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1095252-1095471:1:exon

position:1095471:1
position: 1095471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1099304-1099477:1:exon

position:1099304:1
position: 1099304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1099477:1
position: 1099477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1100442-1100588:1:exon

position:1100442:1
position: 1100442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100588:1
position: 1100588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1100814-1100884:1:exon

position:1100814:1
position: 1100814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100884:1
position: 1100884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1100960-1101040:1:exon

position:1100960:1
position: 1100960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101040:1
position: 1101040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1101596-1101665:1:exon

position:1101596:1
position: 1101596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101665:1
position: 1101665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1102934-1103068:1:exon

position:1102934:1
position: 1102934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103068:1
position: 1103068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1104329-1104401:1:exon

position:1104329:1
position: 1104329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104401:1
position: 1104401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1105192-1105323:1:exon

position:1105192:1
position: 1105192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105323:1
position: 1105323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1105950-1106120:1:exon

position:1105950:1
position: 1105950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106120:1
position: 1106120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1106253-1106410:1:exon

position:1106253:1
position: 1106253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106410:1
position: 1106410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1106666-1106854:1:exon

position:1106666:1
position: 1106666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106854:1
position: 1106854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1107130-1107191:1:exon

position:1107130:1
position: 1107130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1107191:1
position: 1107191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1109527-1109677:1:exon

position:1109527:1
position: 1109527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109677:1
position: 1109677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1110673-1110756:1:exon

position:1110673:1
position: 1110673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110756:1
position: 1110756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1111671-1111827:1:exon

position:1111671:1
position: 1111671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1111827:1
position: 1111827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1113219-1113336:1:exon

position:1113219:1
position: 1113219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113336:1
position: 1113336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1113878-1114002:1:exon

position:1113878:1
position: 1113878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114002:1
position: 1114002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1114102-1114265:1:exon

position:1114102:1
position: 1114102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114265:1
position: 1114265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1114915-1115037:1:exon

position:1114915:1
position: 1114915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115037:1
position: 1115037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1115791-1115870:1:exon

position:1115791:1
position: 1115791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115870:1
position: 1115870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1116083-1116125:1:exon

position:1116083:1
position: 1116083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116125:1
position: 1116125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1116881-1116990:1:exon

position:1116881:1
position: 1116881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116990:1
position: 1116990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1118017-1118113:1:exon

position:1118017:1
position: 1118017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118113:1
position: 1118113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1118686-1118758:1:exon

position:1118686:1
position: 1118686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118758:1
position: 1118758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1118934-1119108:1:exon

position:1118934:1
position: 1118934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119108:1
position: 1119108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1119811-1120001:1:exon

position:1119811:1
position: 1119811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120001:1
position: 1120001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1120947-1121035:1:exon

position:1120947:1
position: 1120947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121035:1
position: 1121035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1121597-1121677:1:exon

position:1121597:1
position: 1121597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121677:1
position: 1121677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1122177-1123185:1:exon

position:1122177:1
position: 1122177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP13A5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ATP13A5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cation-transporting ATPase 13A5
translation: MEEKIWKDHYVLLNKDEENELEAFGYKTQGCRRALSIAGYILSCGVLLLLFYWKPEWDVWANCVPCSLEEADVVLLRTTDEFQKYTWKKVTWIDLSTLALPVGSYSECPLVADKDSVINRAIMKPQLKVRCIQVQKIRYIWDFSVKEFRKVGSLEDSNTCHSIHHKFGAGLTREEREIRQLVCGPNAIEVEIRPIWKLLFKEILNPFYVFQAFTLTLWLSQGYIEYSVAIIVLSVISVGLTVYDLRQQSTKLHDLVEEHNKVQVTVCTKNEGFKELESRYLVPGDVFLLDGKKLSLPCDAVLIDGSCIVNEGMLTGESIPVTKTLLPLTESPEPWKTHSMEDYRRHVLFCGTEIIQAKSTGRGPARAVVLQTGFNTAKGDLVRSILYPRPLNFQLYRDAFKFIVGLSAIGVLGLIYTVCVFTYHNKPVADVVAMALLLLTAAVPPAIPAALTTGTVYAQRRLKKKKIFCITPQRINICGQINLVCFDKTGTLTEDGLDLWGILPSEGSRFQKIHKFPSSTPLPWGPVCAAMASCHSLVVLDKKIQGDPLDLKMFEGTHWEIEESTTAQDRAGAIDACIVRPGPNASSAPVEGIAILHQFPFSSGLQRMSVVSQKIGEEQYDLYMKGAPETVSSFCRQETVPSDFLEELKTYTSQGFRVIALAHKVLSLPEDVDVGDLEREEVESGLEFLGLLVMENRLKPETKPVLQELAAARIRSIMVTGDNLQTAVTVARNAHMIHEACKVIIVEASEPEGSAPASIAWQLAEGSKTSAAAPSEVYANAQEKITLEGESCHYHFAMNGKSYQVLVKHFYSLLPKILLNATVFARMSPGQKSSLVEELQKLDYYVGMCGDGANDCGALKMAHAGISLSEQEASVASPFTSQIPNIQCVPELIREGRAALVASFAVVKYLTLYGLIQFVGTALLFWQLQIFGNYQYLIQDVVITLLVCLTMSLTEAYPKLAPYRPPGQLISPPLLLSVVLNVCFTIAVQTCGFLLVKKQPWYVALASWRHCSLRNHTLTPTGPGENSTSSSAQSTVLSYEGTTLWPLSSINCIIVAFVFSKGKPFRKPIYTNYVFSAILTLQLAICLFLFLADMDAVYSGMQFLCTPVIWKVYVLLMLLVTFCVSFFTEDVLLQNKHLWMLIKACVGYQSKSQYRKWQRMLQRDPNWPPVNTKDFAARSTAEVYVNPSYEHRD
SIO_010081: ATP13A5
subclass of: SO_0000673
so part of: ATP13A5
location: join(1095409..1095471,1099304..1099477,1100442..1100588,1100814..1100884,1100960..1101040,1101596..1101665,1102934..1103068,1104329..1104401,1105192..1105323,1105950..1106120,1106253..1106410,1106666..1106854,1107130..1107191,1109527..1109677,1110673..1110756,1111671..1111827,1113219..1113336,1113878..1114002,1114102..1114265,1114915..1115037,1115791..1115870,1116083..1116125,1116881..1116990,1118017..1118113,1118686..1118758,1118934..1119108,1119811..1120001,1120947..1121035,1121597..1121677,1122177..1122371)
location: region:1095409-1122371:1
so has part: feature:1095409-1095471:1:exon
so has part: feature:1099304-1099477:1:exon
so has part: feature:1100442-1100588:1:exon
so has part: feature:1100814-1100884:1:exon
so has part: feature:1100960-1101040:1:exon
so has part: feature:1101596-1101665:1:exon
so has part: feature:1102934-1103068:1:exon
so has part: feature:1104329-1104401:1:exon
so has part: feature:1105192-1105323:1:exon
so has part: feature:1105950-1106120:1:exon
so has part: feature:1106253-1106410:1:exon
so has part: feature:1106666-1106854:1:exon
so has part: feature:1107130-1107191:1:exon
so has part: feature:1109527-1109677:1:exon
so has part: feature:1110673-1110756:1:exon
so has part: feature:1111671-1111827:1:exon
so has part: feature:1113219-1113336:1:exon
so has part: feature:1113878-1114002:1:exon
so has part: feature:1114102-1114265:1:exon
so has part: feature:1114915-1115037:1:exon
so has part: feature:1115791-1115870:1:exon
so has part: feature:1116083-1116125:1:exon
so has part: feature:1116881-1116990:1:exon
so has part: feature:1118017-1118113:1:exon
so has part: feature:1118686-1118758:1:exon
so has part: feature:1118934-1119108:1:exon
so has part: feature:1119811-1120001:1:exon
so has part: feature:1120947-1121035:1:exon
so has part: feature:1121597-1121677:1:exon
so has part: feature:1122177-1122371:1:exon

XP_003209166.2
type: Protein
SIO_000068: ncbiprotein

position:1095409:1
position: 1095409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122371:1
position: 1122371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095409-1095471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1099304-1099477:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1100442-1100588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1100814-1100884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1100960-1101040:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1101596-1101665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1102934-1103068:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1104329-1104401:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1105192-1105323:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1105950-1106120:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1106253-1106410:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1106666-1106854:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1107130-1107191:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1109527-1109677:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1110673-1110756:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1111671-1111827:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1113219-1113336:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1113878-1114002:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1114102-1114265:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1114915-1115037:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1115791-1115870:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1116083-1116125:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1116881-1116990:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1118017-1118113:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1118686-1118758:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1118934-1119108:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1119811-1120001:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1120947-1121035:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1121597-1121677:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1122177-1122371:1:exon

LOC109369408
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369408
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1116985..1119903)
location: region:1116985-1119903:-1
so has part: feature:1116985-1119903:-1:exon
subclass of: SO_0000011

109369408
type: Gene
SIO_000068: ncbigene

position:1116985:-1
position: 1116985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1119903:-1
position: 1119903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1116985-1119903:-1:exon

LOC109369408
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369408
product: uncharacterized LOC109369408
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002118401.2
SIO_010081: LOC109369408
subclass of: SO_0000673
so part of: LOC109369408
location: complement(join(1116985..1117098,1117604..1117726,1119459..1119903))
location: region:1116985-1119903:-1
so has part: feature:1119459-1119903:-1:exon
so has part: feature:1117604-1117726:-1:exon
so has part: feature:1116985-1117098:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1119459-1119903:-1:exon

position:1119459:-1
position: 1119459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1117604-1117726:-1:exon

position:1117604:-1
position: 1117604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1117726:-1
position: 1117726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1116985-1117098:-1:exon

position:1117098:-1
position: 1117098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLAAT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PLAAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1123275..1125590)
location: region:1123275-1125590:-1
so has part: feature:1123275-1125590:-1:exon
subclass of: SO_0000010

100547534
type: Gene
SIO_000068: ncbigene

position:1123275:-1
position: 1123275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125590:-1
position: 1125590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1123275-1125590:-1:exon

PLAAT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PLAAT1
product: phospholipase A and acyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 220 samples with support for all annotated introns
transcript id: XM_003209119.4
SIO_010081: PLAAT1
subclass of: SO_0000673
so part of: PLAAT1
location: complement(join(1123275..1124404,1124699..1124967,1125189..1125590))
location: region:1123275-1125590:-1
so has part: feature:1125189-1125590:-1:exon
so has part: feature:1124699-1124967:-1:exon
so has part: feature:1123275-1124404:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1125189-1125590:-1:exon

position:1125189:-1
position: 1125189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1124699-1124967:-1:exon

position:1124699:-1
position: 1124699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1124967:-1
position: 1124967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1123275-1124404:-1:exon

position:1124404:-1
position: 1124404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLAAT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PLAAT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipase A and acyltransferase 1
translation: MAANESFSAAHPGDPQPGDLIEIFRPAYQHWALYLGDGYIINVTPVEEGPPATFGSAKSVFSRKAMVRMQLLKEVVGNDTYRINNKYDGTYAPLPVEEIIRRAEYLINQEVSYDLLGNNCEHFVTLLRYGEGVSEQANRAISAIGFVTAAAGAFSLLGLLRSRSRERQY
SIO_010081: PLAAT1
subclass of: SO_0000673
so part of: PLAAT1
location: complement(join(1124303..1124404,1124699..1124967,1125189..1125327))
location: region:1124303-1125327:-1
so has part: feature:1125189-1125327:-1:exon
so has part: feature:1124699-1124967:-1:exon
so has part: feature:1124303-1124404:-1:exon

XP_003209167.1
type: Protein
SIO_000068: ncbiprotein

position:1124303:-1
position: 1124303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1125327:-1
position: 1125327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125189-1125327:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1124699-1124967:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1124303-1124404:-1:exon

LOC100546606
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1131184..1151703
location: region:1131184-1151703:1
so has part: feature:1131184-1151703:1:exon
subclass of: SO_0000010

100546606
type: Gene
SIO_000068: ncbigene

position:1131184:1
position: 1131184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151703:1
position: 1151703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131184-1151703:1:exon

LOC100546606
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546606
product: probable cation-transporting ATPase 13A4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019618915.1
SIO_010081: LOC100546606
subclass of: SO_0000673
so part of: LOC100546606
location: join(1131184..1131459,1136442..1136615,1138887..1139024,1140335..1140405,1140495..1140575,1141175..1141244,1142029..1142163,1142563..1142635,1143252..1143383,1144571..1144741,1145171..1145328,1146786..1146974,1147291..1147352,1148261..1148411,1149759..1149845,1150474..1150627,1151217..1151703)
location: region:1131184-1151703:1
so has part: feature:1131184-1131459:1:exon
so has part: feature:1136442-1136615:1:exon
so has part: feature:1138887-1139024:1:exon
so has part: feature:1140335-1140405:1:exon
so has part: feature:1140495-1140575:1:exon
so has part: feature:1141175-1141244:1:exon
so has part: feature:1142029-1142163:1:exon
so has part: feature:1142563-1142635:1:exon
so has part: feature:1143252-1143383:1:exon
so has part: feature:1144571-1144741:1:exon
so has part: feature:1145171-1145328:1:exon
so has part: feature:1146786-1146974:1:exon
so has part: feature:1147291-1147352:1:exon
so has part: feature:1148261-1148411:1:exon
so has part: feature:1149759-1149845:1:exon
so has part: feature:1150474-1150627:1:exon
so has part: feature:1151217-1151703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1131184-1131459:1:exon

position:1131459:1
position: 1131459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1136442-1136615:1:exon

position:1136442:1
position: 1136442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136615:1
position: 1136615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1138887-1139024:1:exon

position:1138887:1
position: 1138887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139024:1
position: 1139024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1140335-1140405:1:exon

position:1140335:1
position: 1140335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140405:1
position: 1140405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1140495-1140575:1:exon

position:1140495:1
position: 1140495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140575:1
position: 1140575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1141175-1141244:1:exon

position:1141175:1
position: 1141175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141244:1
position: 1141244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1142029-1142163:1:exon

position:1142029:1
position: 1142029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142163:1
position: 1142163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1142563-1142635:1:exon

position:1142563:1
position: 1142563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1142635:1
position: 1142635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1143252-1143383:1:exon

position:1143252:1
position: 1143252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1143383:1
position: 1143383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1144571-1144741:1:exon

position:1144571:1
position: 1144571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144741:1
position: 1144741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1145171-1145328:1:exon

position:1145171:1
position: 1145171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1145328:1
position: 1145328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1146786-1146974:1:exon

position:1146786:1
position: 1146786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146974:1
position: 1146974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1147291-1147352:1:exon

position:1147291:1
position: 1147291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147352:1
position: 1147352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1148261-1148411:1:exon

position:1148261:1
position: 1148261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148411:1
position: 1148411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1149759-1149845:1:exon

position:1149759:1
position: 1149759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149845:1
position: 1149845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1150474-1150627:1:exon

position:1150474:1
position: 1150474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150627:1
position: 1150627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1151217-1151703:1:exon

position:1151217:1
position: 1151217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100546606
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546606
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cation-transporting ATPase 13A4
translation: MGENPAKNHYALLNQGEENEMEIFGYKTQGCRKALCIAGYILSCGALLLLFYWKPEWDVWANCVPCSLEEADVVLLRTTDEFRIYSHKHVTWISMSGIIRSRLDYPSIAEEDSIFNKALMKPSLQVKSIQVQKIRYVWNIYAKQFQKVGALEDHHTCSAIHAKFGSGLTCNEQSLRRVICGPNTIDVPVIPIWKLLIKEVLNPFYVFQLFSVCLWFAEDYMEYAAAIIIMSLLSISLTVYDLRQQSVKLQRLVESHNNIMVTVCRNKEGFQELESHHLVPGDTMVLKEGKALLPCDAILISGQCIVNESMLTGESIPVTKTQLPQADNLKPWKMHCAEDYKKHILFCGTEVIQTKGDDRGVVKAVVLQTGFNTTKGDLVRSILYPKPVNFKLYRDALRFLMCLIAFATIGMIYTVCVFALNGEEAGEVVKKALDVITIAVPPALPAALTTGIIYTQRRLKKKGIFCISPQRINMCGQLNLICFDKTGTLTEDGLDLWGLLPSEGNCFQDVHRFPADHSLPWGPVFSTMVVCHSLIVLEGKIQGDPLDVKMFEATNWVIDDSSGHQTEGQRSTHATVVRPGPKANRASVEGITILHQFPFSSALQRMSVIAQEIGGEKQVFTKGAPEMVAVLCRAETVPSNFESKLLFYTAQGFRVIGLAYKSLQLGKQSTDLTR
SIO_010081: LOC100546606
subclass of: SO_0000673
so part of: LOC100546606
location: join(1131397..1131459,1136442..1136615,1138887..1139024,1140335..1140405,1140495..1140575,1141175..1141244,1142029..1142163,1142563..1142635,1143252..1143383,1144571..1144741,1145171..1145328,1146786..1146974,1147291..1147352,1148261..1148411,1149759..1149845,1150474..1150627,1151217..1151332)
location: region:1131397-1151332:1
so has part: feature:1131397-1131459:1:exon
so has part: feature:1136442-1136615:1:exon
so has part: feature:1138887-1139024:1:exon
so has part: feature:1140335-1140405:1:exon
so has part: feature:1140495-1140575:1:exon
so has part: feature:1141175-1141244:1:exon
so has part: feature:1142029-1142163:1:exon
so has part: feature:1142563-1142635:1:exon
so has part: feature:1143252-1143383:1:exon
so has part: feature:1144571-1144741:1:exon
so has part: feature:1145171-1145328:1:exon
so has part: feature:1146786-1146974:1:exon
so has part: feature:1147291-1147352:1:exon
so has part: feature:1148261-1148411:1:exon
so has part: feature:1149759-1149845:1:exon
so has part: feature:1150474-1150627:1:exon
so has part: feature:1151217-1151332:1:exon

XP_019474460.1
type: Protein
SIO_000068: ncbiprotein

position:1131397:1
position: 1131397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1151332:1
position: 1151332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131397-1131459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136442-1136615:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1138887-1139024:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1140335-1140405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1140495-1140575:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1141175-1141244:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1142029-1142163:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1142563-1142635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1143252-1143383:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1144571-1144741:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1145171-1145328:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1146786-1146974:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1147291-1147352:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1148261-1148411:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1149759-1149845:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1150474-1150627:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1151217-1151332:1:exon

OPA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: OPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1153174..1181955)
location: region:1153174-1181955:-1
so has part: feature:1153174-1181955:-1:exon
subclass of: SO_0000010

100547224
type: Gene
SIO_000068: ncbigene

position:1153174:-1
position: 1153174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1181955:-1
position: 1181955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1153174-1181955:-1:exon

OPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: OPA1
product: OPA1 mitochondrial dynamin like GTPase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 194 samples with support for all annotated introns
transcript id: XM_031555062.1
SIO_010081: OPA1
subclass of: SO_0000673
so part of: OPA1
location: complement(join(1153174..1153326,1154453..1154569,1155613..1155753,1157131..1157210,1157728..1157836,1158470..1158622,1159232..1159397,1161103..1161179,1161802..1161866,1162266..1162381,1163094..1163166,1163256..1163328,1163865..1163995,1164456..1164555,1164703..1164774,1165074..1165148,1165630..1165710,1165915..1166028,1166934..1167020,1167801..1167905,1168463..1168516,1172428..1172538,1177790..1177857,1178485..1178538,1179735..1179842,1180851..1180947,1181622..1181955))
location: region:1153174-1181955:-1
so has part: feature:1181622-1181955:-1:exon
so has part: feature:1180851-1180947:-1:exon
so has part: feature:1179735-1179842:-1:exon
so has part: feature:1178485-1178538:-1:exon
so has part: feature:1177790-1177857:-1:exon
so has part: feature:1172428-1172538:-1:exon
so has part: feature:1168463-1168516:-1:exon
so has part: feature:1167801-1167905:-1:exon
so has part: feature:1166934-1167020:-1:exon
so has part: feature:1165915-1166028:-1:exon
so has part: feature:1165630-1165710:-1:exon
so has part: feature:1165074-1165148:-1:exon
so has part: feature:1164703-1164774:-1:exon
so has part: feature:1164456-1164555:-1:exon
so has part: feature:1163865-1163995:-1:exon
so has part: feature:1163256-1163328:-1:exon
so has part: feature:1163094-1163166:-1:exon
so has part: feature:1162266-1162381:-1:exon
so has part: feature:1161802-1161866:-1:exon
so has part: feature:1161103-1161179:-1:exon
so has part: feature:1159232-1159397:-1:exon
so has part: feature:1158470-1158622:-1:exon
so has part: feature:1157728-1157836:-1:exon
so has part: feature:1157131-1157210:-1:exon
so has part: feature:1155613-1155753:-1:exon
so has part: feature:1154453-1154569:-1:exon
so has part: feature:1153174-1153326:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1181622-1181955:-1:exon

position:1181622:-1
position: 1181622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1180851-1180947:-1:exon

position:1180851:-1
position: 1180851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1180947:-1
position: 1180947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1179735-1179842:-1:exon

position:1179735:-1
position: 1179735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1179842:-1
position: 1179842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1178485-1178538:-1:exon

position:1178485:-1
position: 1178485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1178538:-1
position: 1178538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1177790-1177857:-1:exon

position:1177790:-1
position: 1177790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1177857:-1
position: 1177857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1172428-1172538:-1:exon

position:1172428:-1
position: 1172428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1172538:-1
position: 1172538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1168463-1168516:-1:exon

position:1168463:-1
position: 1168463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168516:-1
position: 1168516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1167801-1167905:-1:exon

position:1167801:-1
position: 1167801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167905:-1
position: 1167905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1166934-1167020:-1:exon

position:1166934:-1
position: 1166934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1167020:-1
position: 1167020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1165915-1166028:-1:exon

position:1165915:-1
position: 1165915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1166028:-1
position: 1166028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1165630-1165710:-1:exon

position:1165630:-1
position: 1165630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165710:-1
position: 1165710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1165074-1165148:-1:exon

position:1165074:-1
position: 1165074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1165148:-1
position: 1165148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1164703-1164774:-1:exon

position:1164703:-1
position: 1164703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164774:-1
position: 1164774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1164456-1164555:-1:exon

position:1164456:-1
position: 1164456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1164555:-1
position: 1164555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1163865-1163995:-1:exon

position:1163865:-1
position: 1163865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163995:-1
position: 1163995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1163256-1163328:-1:exon

position:1163256:-1
position: 1163256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163328:-1
position: 1163328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1163094-1163166:-1:exon

position:1163094:-1
position: 1163094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1163166:-1
position: 1163166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1162266-1162381:-1:exon

position:1162266:-1
position: 1162266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1162381:-1
position: 1162381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1161802-1161866:-1:exon

position:1161802:-1
position: 1161802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161866:-1
position: 1161866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1161103-1161179:-1:exon

position:1161103:-1
position: 1161103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1161179:-1
position: 1161179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1159232-1159397:-1:exon

position:1159232:-1
position: 1159232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1159397:-1
position: 1159397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1158470-1158622:-1:exon

position:1158470:-1
position: 1158470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158622:-1
position: 1158622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1157728-1157836:-1:exon

position:1157728:-1
position: 1157728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157836:-1
position: 1157836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1157131-1157210:-1:exon

position:1157131:-1
position: 1157131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1157210:-1
position: 1157210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1155613-1155753:-1:exon

position:1155613:-1
position: 1155613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155753:-1
position: 1155753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1154453-1154569:-1:exon

position:1154453:-1
position: 1154453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154569:-1
position: 1154569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1153174-1153326:-1:exon

position:1153326:-1
position: 1153326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: OPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dynamin-like 120 kDa protein, mitochondrial
translation: MMPDLDEYKWIIPDFIWELDEHIDLEKLIKALPDADDLAKLLPDFEKIGESFTSLKGIFSPGYNLVSEVIGASDLLLLLGTPGETAFRATDQGYDGDKQYKKGLLGELILLQQQIQQHEEEARRAAGQYNPGSYQQKRKVSDKEKIDQLQEELLRTQLKYQRMLERLEKENKELRKLVLQRDDKGIHQRKLKKSLIDMYSEVLDILSDYDASYNTQDHLPRVVVVGDQSAGKTSVLEMIAQARIFPRGSGEMMTRSPVKVTLSEGPHHVALFKDSSREFDLTKEEDLAALRNEIEIRMRNSVKEGCTVSTETISLSVKGPGLQRMVLVDLPGVISTVTSGMAPDTKETIFSISKAYMQNPNAIILCIQDGSVDAERSIVTDLVSQMDPQGKRTIFVLTKVDLAEKNVASPSRIQQIIEGKLFPMKALGYFAVVTGKGNSSESIESIKEYEEEFFQNSKLLKTCMLKAHQVTTKNLSLAVSDCFWKMVRESVEQQADAFKATRFNLETEWKNNYPRLRELDRNELFEKAKNEILDEVISLTQVTPKHWEEILQKTLWERVSTHVIENIYLPAAQTMNSGTFNTTVDIKLKQWTDKQLPNKAVEVAWETLQEEFSRFMTEQKGKEHDDIFDKLKQAVKEESIKRHKWNERAEDSLRVIQHNALEDRSISDKQQWDAAIHFMEETLQSRLKDTESVIEDMVGPDWKKRWLYWIGRTKEQNIRNETKNELEKLIKCNEEHAAYLANDEVTTVRKNLEARGITVDPCLIKDTWHQIYRRYFLKTALNHCNLCRRGFYYYQRHFVDSELECNDIVLFWRIQRMLAITANTLRQQLTNTEGKAHSELFEIKKMFYKGFF
SIO_010081: OPA1
subclass of: SO_0000673
so part of: OPA1
location: complement(join(1153174..1153326,1154453..1154569,1155613..1155753,1157131..1157210,1157728..1157836,1158470..1158622,1159232..1159397,1161103..1161179,1161802..1161866,1162266..1162381,1163094..1163166,1163256..1163328,1163865..1163995,1164456..1164555,1164703..1164774,1165074..1165148,1165630..1165710,1165915..1166028,1166934..1167020,1167801..1167905,1168463..1168516,1172428..1172538,1177790..1177857,1178485..1178538,1179735..1179842,1180851..1180926))
location: region:1153174-1180926:-1
so has part: feature:1180851-1180926:-1:exon
so has part: feature:1179735-1179842:-1:exon
so has part: feature:1178485-1178538:-1:exon
so has part: feature:1177790-1177857:-1:exon
so has part: feature:1172428-1172538:-1:exon
so has part: feature:1168463-1168516:-1:exon
so has part: feature:1167801-1167905:-1:exon
so has part: feature:1166934-1167020:-1:exon
so has part: feature:1165915-1166028:-1:exon
so has part: feature:1165630-1165710:-1:exon
so has part: feature:1165074-1165148:-1:exon
so has part: feature:1164703-1164774:-1:exon
so has part: feature:1164456-1164555:-1:exon
so has part: feature:1163865-1163995:-1:exon
so has part: feature:1163256-1163328:-1:exon
so has part: feature:1163094-1163166:-1:exon
so has part: feature:1162266-1162381:-1:exon
so has part: feature:1161802-1161866:-1:exon
so has part: feature:1161103-1161179:-1:exon
so has part: feature:1159232-1159397:-1:exon
so has part: feature:1158470-1158622:-1:exon
so has part: feature:1157728-1157836:-1:exon
so has part: feature:1157131-1157210:-1:exon
so has part: feature:1155613-1155753:-1:exon
so has part: feature:1154453-1154569:-1:exon
so has part: feature:1153174-1153326:-1:exon

XP_031410922.1
type: Protein
SIO_000068: ncbiprotein

position:1180926:-1
position: 1180926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1180851-1180926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1179735-1179842:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1178485-1178538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1177790-1177857:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1172428-1172538:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1168463-1168516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1167801-1167905:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1166934-1167020:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1165915-1166028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1165630-1165710:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1165074-1165148:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1164703-1164774:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1164456-1164555:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1163865-1163995:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1163256-1163328:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1163094-1163166:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1162266-1162381:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1161802-1161866:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1161103-1161179:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1159232-1159397:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1158470-1158622:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1157728-1157836:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1157131-1157210:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1155613-1155753:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1154453-1154569:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1153174-1153326:-1:exon

LOC116217042
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217042
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1186820..1194837)
location: region:1186820-1194837:-1
so has part: feature:1186820-1194837:-1:exon
subclass of: SO_0000011

116217042
type: Gene
SIO_000068: ncbigene

position:1186820:-1
position: 1186820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1194837:-1
position: 1194837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1186820-1194837:-1:exon

LOC116217042
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217042
product: uncharacterized LOC116217042
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XR_004160918.1
SIO_010081: LOC116217042
subclass of: SO_0000673
so part of: LOC116217042
location: complement(join(1186820..1193048,1194731..1194837))
location: region:1186820-1194837:-1
so has part: feature:1194731-1194837:-1:exon
so has part: feature:1186820-1193048:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1194731-1194837:-1:exon

position:1194731:-1
position: 1194731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1186820-1193048:-1:exon

position:1193048:-1
position: 1193048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912526
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912526
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1229660..1253896)
location: region:1229660-1253896:-1
so has part: feature:1229660-1253896:-1:exon
subclass of: SO_0000011

104912526
type: Gene
SIO_000068: ncbigene

position:1229660:-1
position: 1229660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1253896:-1
position: 1253896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1229660-1253896:-1:exon

LOC104912526
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912526
product: uncharacterized LOC104912526, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004160916.1
SIO_010081: LOC104912526
subclass of: SO_0000673
so part of: LOC104912526
location: complement(join(1229660..1234302,1234491..1234656,1235204..1239045,1242172..1242255,1253203..1253896))
location: region:1229660-1253896:-1
so has part: feature:1253203-1253896:-1:exon
so has part: feature:1242172-1242255:-1:exon
so has part: feature:1235204-1239045:-1:exon
so has part: feature:1234491-1234656:-1:exon
so has part: feature:1229660-1234302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1253203-1253896:-1:exon

position:1253203:-1
position: 1253203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1242172-1242255:-1:exon

position:1242172:-1
position: 1242172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242255:-1
position: 1242255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1235204-1239045:-1:exon

position:1235204:-1
position: 1235204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1239045:-1
position: 1239045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1234491-1234656:-1:exon

position:1234491:-1
position: 1234491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1234656:-1
position: 1234656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1229660-1234302:-1:exon

position:1234302:-1
position: 1234302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912526
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912526
product: uncharacterized LOC104912526, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004160917.1
SIO_010081: LOC104912526
subclass of: SO_0000673
so part of: LOC104912526
location: complement(join(1229660..1234302,1234491..1234656,1235204..1239045,1242172..1242255,1242367..1243968))
location: region:1229660-1243968:-1
so has part: feature:1242367-1243968:-1:exon
so has part: feature:1242172-1242255:-1:exon
so has part: feature:1235204-1239045:-1:exon
so has part: feature:1234491-1234656:-1:exon
so has part: feature:1229660-1234302:-1:exon

position:1243968:-1
position: 1243968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1242367-1243968:-1:exon

position:1242367:-1
position: 1242367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1242172-1242255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1235204-1239045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1234491-1234656:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1229660-1234302:-1:exon

LOC104912530
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912530
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1267147..1274732)
location: region:1267147-1274732:-1
so has part: feature:1267147-1274732:-1:exon
subclass of: SO_0000011

104912530
type: Gene
SIO_000068: ncbigene

position:1267147:-1
position: 1267147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274732:-1
position: 1274732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267147-1274732:-1:exon

LOC104912530
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912530
product: uncharacterized LOC104912530
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XR_002118398.1
SIO_010081: LOC104912530
subclass of: SO_0000673
so part of: LOC104912530
location: complement(join(1267147..1269086,1269583..1274732))
location: region:1267147-1274732:-1
so has part: feature:1269583-1274732:-1:exon
so has part: feature:1267147-1269086:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1269583-1274732:-1:exon

position:1269583:-1
position: 1269583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1267147-1269086:-1:exon

position:1269086:-1
position: 1269086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HES1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HES1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1295309..1297042)
location: region:1295309-1297042:-1
so has part: feature:1295309-1297042:-1:exon
subclass of: SO_0000010

104912623
type: Gene
SIO_000068: ncbigene

position:1295309:-1
position: 1295309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1297042:-1
position: 1297042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295309-1297042:-1:exon

HES1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HES1
product: hes family bHLH transcription factor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019618923.2
SIO_010081: HES1
subclass of: SO_0000673
so part of: HES1
location: complement(join(1295309..1296045,1296365..1296452,1296911..1297042))
location: region:1295309-1297042:-1
so has part: feature:1296911-1297042:-1:exon
so has part: feature:1296365-1296452:-1:exon
so has part: feature:1295309-1296045:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1296911-1297042:-1:exon

position:1296911:-1
position: 1296911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1296365-1296452:-1:exon

position:1296365:-1
position: 1296365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1296452:-1
position: 1296452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1295309-1296045:-1:exon

position:1296045:-1
position: 1296045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HES1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HES1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor HES-1
translation: MRAVALPGGYTNSQHWVSWRLAVGLVLAGSTRRGPAGDTWGCWQSSRHSKLEKADILEMTVKHLRSLQRAQMTAALSTDPTVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLASCMTQINAINYPVPPPPLPPPPAAFGPPLVPPGGGAGPLPAVPCKPGSDAAKVYGGFQLLPASDGQFAFLIPSAAFAPGGAVLPLYGGPPTAATAASPPGPSPGTADSVWRPW
SIO_010081: HES1
subclass of: SO_0000673
so part of: HES1
location: complement(join(1295564..1296045,1296365..1296452,1296911..1297042))
location: region:1295564-1297042:-1
so has part: feature:1296911-1297042:-1:exon
so has part: feature:1296365-1296452:-1:exon
so has part: feature:1295564-1296045:-1:exon

XP_019474468.2
type: Protein
SIO_000068: ncbiprotein

position:1295564:-1
position: 1295564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296911-1297042:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1296365-1296452:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1295564-1296045:-1:exon

LOC104912531
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1296611..1298940
location: region:1296611-1298940:1
so has part: feature:1296611-1298940:1:exon
subclass of: SO_0000010

104912531
type: Gene
SIO_000068: ncbigene

position:1296611:1
position: 1296611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298940:1
position: 1298940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1296611-1298940:1:exon

LOC104912531
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912531
product: carboxypeptidase N subunit 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555094.1
SIO_010081: LOC104912531
subclass of: SO_0000673
so part of: LOC104912531
location: 1296611..1298940
location: region:1296611-1298940:1
so has part: feature:1296611-1298940:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1296611-1298940:1:exon

LOC104912531
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912531
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase N subunit 2-like
translation: MKQQFLFLFFLCFHPHKCQSQTLGADPYETPKDYQEVYRGSKNDVKEIPKIAKSFISEMIFVQTSITAIRKGAFRYMPNLTKILFIGNNIKTVESGAFDGLEKLRDLEISGASLEELAVGTFQNLPNLQRLELRDSHIRCIPKGLFEGLKNLGELSLHINVIPSLPEGIFDSLANLTFLDLARNRITFLPGDVFSKLPQLQVLRLYENELQDLPEGLLDAQRGLLELSLQRNRLRVLPPTLLRNLTYLEKLLLDNNLIRVLPPQSFFGLNRLKLLTLGSNHITQLPCCLFDTMPHLWELDLGRNSLATLPDGIFVNLTSLGKLILSHNQLAALPRGVFTGLNKLLDLQLDTNQLSALDDEVFAPLPNLKTLNLRMNQLESIP
SIO_010081: LOC104912531
subclass of: SO_0000673
so part of: LOC104912531
location: 1297698..1298846
location: region:1297698-1298846:1
so has part: feature:1297698-1298846:1:exon

XP_031410954.1
type: Protein
SIO_000068: ncbiprotein

position:1297698:1
position: 1297698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298846:1
position: 1298846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1297698-1298846:1:exon

LOC109369362
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <1298847..1302358
location: region:1298847-1302358:1
so has part: feature:1298847-1302358:1:exon
subclass of: SO_0000010

109369362
type: Gene
SIO_000068: ncbigene

position:1298847:1
position: 1298847
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1302358:1
position: 1302358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298847-1302358:1:exon

LOC109369362
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369362
product: platelet glycoprotein Ib alpha chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019618851.1
SIO_010081: LOC109369362
subclass of: SO_0000673
so part of: LOC109369362
location: <1298847..1302358
location: region:1298847-1302358:1
so has part: feature:1298847-1302358:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298847-1302358:1:exon

LOC109369362
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369362
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet glycoprotein Ib alpha chain-like
translation: GLSDPLKRLSSLYLSGNPWRCDCNLCYLHSWIQGNSEKVKLSSQVSCKTPPHLAGQAVISLRENQLICPATLPPSVSFIPSLLLTSTSSQGMPSLLPPEDVPTAAQTTLSSVAFPIMALPTMPLPVATSMPTESFITAPSPTMLSKASITVSPSTTLLKISTTAPSLYKASNTTPSPSVLPKISITISSPTGLPKTSVISSLPSMLPKMSIVSPAVLPKTSITNPERALSTLAHTTSPIPTTTWAAITQQVPPALPALTERPASHVPPLQGHTSPQPASPSTAPGGHHHRDFSLRANPWHCCISFALGLAVLVLQVCAMLLEVKLTLLLYRAAHGHDHPVPPVRLLSVQVLDAAHPGRAAEAHRSGTVPQGRASQDPRGFRVPPRRRLEML
SIO_010081: LOC109369362
subclass of: SO_0000673
so part of: LOC109369362
location: <1298847..1300022
location: region:1298847-1300022:1
so has part: feature:1298847-1300022:1:exon

XP_019474396.1
type: Protein
SIO_000068: ncbiprotein

position:1300022:1
position: 1300022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1298847-1300022:1:exon

LOC100546914
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100546914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1314583..1326056
location: region:1314583-1326056:1
so has part: feature:1314583-1326056:1:exon
subclass of: SO_0000010

100546914
type: Gene
SIO_000068: ncbigene

position:1314583:1
position: 1314583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1326056:1
position: 1326056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1314583-1326056:1:exon

LOC100546914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546914
product: platelet glycoprotein V, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 219 samples with support for all annotated introns
transcript id: XM_010716361.3
SIO_010081: LOC100546914
subclass of: SO_0000673
so part of: LOC100546914
location: join(1314583..1315072,1316569..1326056)
location: region:1314583-1326056:1
so has part: feature:1314583-1315072:1:exon
so has part: feature:1316569-1326056:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1314583-1315072:1:exon

position:1315072:1
position: 1315072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1316569-1326056:1:exon

position:1316569:1
position: 1316569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100546914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100546914
product: platelet glycoprotein V, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_010716362.3
SIO_010081: LOC100546914
subclass of: SO_0000673
so part of: LOC100546914
location: join(1314777..1315072,1316569..1321568,1323718..1326056)
location: region:1314777-1326056:1
so has part: feature:1314777-1315072:1:exon
so has part: feature:1316569-1321568:1:exon
so has part: feature:1323718-1326056:1:exon

position:1314777:1
position: 1314777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1314777-1315072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1316569-1321568:1:exon

position:1321568:1
position: 1321568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1323718-1326056:1:exon

position:1323718:1
position: 1323718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100546914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet glycoprotein V
translation: MLVIRLSVVIKLFFQLEASVCPEKCDCSFKNAIHCSGPRIKDLESLNLPCNMTKIHITNTNVTYVQDVFAGMGELQHLILSSNNIALISPVAFKGLRRLKALKLLDNNLVELPPDVFNDTVQLQQLIIENNRLKSIQENLFDRLGSLEELFLNKNQLRSLPSGVLKKLAKLKVLNLSRNSLAVLPRNIFSALTKLEKLMLYFNRLSSIESGIFDSLRELLELFLHSNDIQSIAPDVFHHLHKLRSLTLSRNKLEILPPGLFLHLHDLSKLTLYGNPLKSLPEVLFGEMRNLGSLWLYHTKLSTIPDFVFSNLTNLELLVLSFNPELSVLPENVFSGLKELQGLSLHTNNISSLPEGIFQSLQKLQNVSLFSSRLQVLPRSLFHNLKHLQKVYLNSTKLQSLPEDLFTTLPELQEVYLNDNPWKCDCQILGFREWLQKSTEVVKEAQSLMCDSPLSLRNISLLALTDHHLKCLPTTAITYQMFKSTYFQTSTSLMMEHLKSSWETTVTAVSDIDTSTSTSVPVVRATPGFTYSHIQDVEGSGSHFLDVPTQTSPNILETNSVRGTVLTTLAQWDELPVYRSTQPYFSTRIVCCQLFLCLHSLVLALQTVIVVLSLYVVVKARQLLHSRHIPAQPVVLIKFVK
SIO_010081: LOC100546914
subclass of: SO_0000673
so part of: LOC100546914
location: 1323744..1325669
location: region:1323744-1325669:1
so has part: feature:1323744-1325669:1:exon

XP_010714663.1
type: Protein
SIO_000068: ncbiprotein

position:1323744:1
position: 1323744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325669:1
position: 1325669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1323744-1325669:1:exon

LOC100546914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100546914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: platelet glycoprotein V
translation: MLVIRLSVVIKLFFQLEASVCPEKCDCSFKNAIHCSGPRIKDLESLNLPCNMTKIHITNTNVTYVQDVFAGMGELQHLILSSNNIALISPVAFKGLRRLKALKLLDNNLVELPPDVFNDTVQLQQLIIENNRLKSIQENLFDRLGSLEELFLNKNQLRSLPSGVLKKLAKLKVLNLSRNSLAVLPRNIFSALTKLEKLMLYFNRLSSIESGIFDSLRELLELFLHSNDIQSIAPDVFHHLHKLRSLTLSRNKLEILPPGLFLHLHDLSKLTLYGNPLKSLPEVLFGEMRNLGSLWLYHTKLSTIPDFVFSNLTNLELLVLSFNPELSVLPENVFSGLKELQGLSLHTNNISSLPEGIFQSLQKLQNVSLFSSRLQVLPRSLFHNLKHLQKVYLNSTKLQSLPEDLFTTLPELQEVYLNDNPWKCDCQILGFREWLQKSTEVVKEAQSLMCDSPLSLRNISLLALTDHHLKCLPTTAITYQMFKSTYFQTSTSLMMEHLKSSWETTVTAVSDIDTSTSTSVPVVRATPGFTYSHIQDVEGSGSHFLDVPTQTSPNILETNSVRGTVLTTLAQWDELPVYRSTQPYFSTRIVCCQLFLCLHSLVLALQTVIVVLSLYVVVKARQLLHSRHIPAQPVVLIKFVK
SIO_010081: LOC100546914
subclass of: SO_0000673
so part of: LOC100546914
location: 1323744..1325669
location: region:1323744-1325669:1
so has part: feature:1323744-1325669:1:exon

XP_010714664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1323744-1325669:1:exon

LOC109369409
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369409
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1326160..1331642)
location: region:1326160-1331642:-1
so has part: feature:1326160-1331642:-1:exon
subclass of: SO_0000011

109369409
type: Gene
SIO_000068: ncbigene

position:1326160:-1
position: 1326160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1331642:-1
position: 1331642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326160-1331642:-1:exon

LOC109369409
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369409
product: uncharacterized LOC109369409
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002118403.2
SIO_010081: LOC109369409
subclass of: SO_0000673
so part of: LOC109369409
location: complement(join(1326160..1328170,1331023..1331642))
location: region:1326160-1331642:-1
so has part: feature:1331023-1331642:-1:exon
so has part: feature:1326160-1328170:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1331023-1331642:-1:exon

position:1331023:-1
position: 1331023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1326160-1328170:-1:exon

position:1328170:-1
position: 1328170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100547070
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100547070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1331781..1337883
location: region:1331781-1337883:1
so has part: feature:1331781-1337883:1:exon
subclass of: SO_0000010

100547070
type: Gene
SIO_000068: ncbigene

position:1331781:1
position: 1331781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337883:1
position: 1337883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1331781-1337883:1:exon

LOC100547070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100547070
product: leucine-rich repeat-containing protein 15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 120 samples with support for all annotated introns
transcript id: XM_010716364.3
SIO_010081: LOC100547070
subclass of: SO_0000673
so part of: LOC100547070
location: join(1331781..1334029,1335111..1337883)
location: region:1331781-1337883:1
so has part: feature:1331781-1334029:1:exon
so has part: feature:1335111-1337883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1331781-1334029:1:exon

position:1334029:1
position: 1334029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1335111-1337883:1:exon

position:1335111:1
position: 1335111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100547070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100547070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 15
translation: MGPMEQGIWWLLLLLLLLGFHPVRGQCPEQCQCVRTAQVECSGAGITAVPSPIPANTVTLQIVNTRITVLGEASFGNASLLIGLRIEKNDLQHVSPDAFQHLPDLRYLSLASNKLQELPVQVFQPLGKLESLLLSSNQLLRVEPDHFAHLSNLKELQLHGNNLRELTEGLFDQLASLTKLNLARNNLDRLPPRAFERLPQLQVLRLYENRLRHIPAGAFDALPELQELGLHQNQLEMLSPELFVHNGNLQKLYLSNNLLTALPAGIFLPLRALSKITLHVNRLRDISPAAFGPMPNLRELWLYENELAALPAAVFSNLTQLQLLVLSKNQLRSLAPGAFRGLGELLELSLHSNALHRLDAGALGGMPKLQNISLQNNRLQTLPRGLFAATPRLQHIQLQANTLESLPAGIFSPLSAVREVKLHNNSWRCDQAILPLRAWLEANPSKVGETPPVCAQPAPLRGTPIAKLWQDQPPTARPSSPLPARPSQEALPSGFPTTLPVTPVSREEEEEEEGRGWWGLTRTQSAVVGAVIVLVCVALLCALVALVVYSCRKKSHVVLMRMKAPNEA
SIO_010081: LOC100547070
subclass of: SO_0000673
so part of: LOC100547070
location: join(1334026..1334029,1335111..1336813)
location: region:1334026-1336813:1
so has part: feature:1334026-1334029:1:exon
so has part: feature:1335111-1336813:1:exon

XP_010714666.1
type: Protein
SIO_000068: ncbiprotein

position:1334026:1
position: 1334026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336813:1
position: 1336813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1334026-1334029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335111-1336813:1:exon

LOC104912532
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912532
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1337997..1340928
location: region:1337997-1340928:1
so has part: feature:1337997-1340928:1:exon
subclass of: SO_0000010

104912532
type: Gene
SIO_000068: ncbigene

position:1337997:1
position: 1337997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340928:1
position: 1340928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337997-1340928:1:exon

LOC104912532
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912532
product: carboxypeptidase N subunit 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_010716365.3
SIO_010081: LOC104912532
subclass of: SO_0000673
so part of: LOC104912532
location: join(1337997..1338717,1339117..1340928)
location: region:1337997-1340928:1
so has part: feature:1337997-1338717:1:exon
so has part: feature:1339117-1340928:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1337997-1338717:1:exon

position:1338717:1
position: 1338717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1339117-1340928:1:exon

position:1339117:1
position: 1339117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912532
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912532
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase N subunit 2-like
translation: MPACGCCPCAPCGFTSAPGVGLFFGVLQGHGLLLLISGKGQLHPSRNMLSAASTSAPGHIFPSRRVSLLAAGCVFPAVVVPVMPLSCSMLLPAVLGLGALLVWGLPSPCPPPCQCYGRASVFCSEERMREIPAGLPGNATQLIFVETALSHIRSGVLGPSTALTKLVFINNHIQELEPGAFRMLPGLAELELSGNPLPFVSPELLKGLPSLTVLSLSSNALRSLHPELFTAVGNLQDLRLQGNRIEALPHDIFHPLQHLQALDLSQNVLAELPKGLLAPLTALRVLKLSNNMLARLLPRAFVTLTQLAELHLDGNQLVELPPGAFTGLVGLRRLQLQHNALGSLAPATFSGLTNLTSLSLEGNRLAQLPAALLQGTPYLLHLSLARNHLQTLPRGLFANLSALQSLALEHNALSHLPAEAFHGLAELTALQLGRNNLSVLPSGLLDELPRLTSLGLEHNRLSHLPTGFFGANEELVRVGLESNPWVCDCRLAYLLSWLQVFAEPLIHLQASCTGPAALMGRPLLEVTLRPQMCSRHQGWDETPGEGTPGQCIYSDPEGTLHISCNATGCQQLSLRLPPPPPGETARLGPEYQGDWVLRSSCGTLRVSILVTVRDGEKDVSPGDPAAP
SIO_010081: LOC104912532
subclass of: SO_0000673
so part of: LOC104912532
location: join(1338460..1338717,1339117..1340742)
location: region:1338460-1340742:1
so has part: feature:1338460-1338717:1:exon
so has part: feature:1339117-1340742:1:exon

XP_010714667.2
type: Protein
SIO_000068: ncbiprotein

position:1338460:1
position: 1338460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340742:1
position: 1340742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1338460-1338717:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1339117-1340742:1:exon

ATP13A3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ATP13A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1341961..1386002
location: region:1341961-1386002:1
so has part: feature:1341961-1386002:1:exon
subclass of: SO_0000010

100546459
type: Gene
SIO_000068: ncbigene

position:1341961:1
position: 1341961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1386002:1
position: 1386002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341961-1386002:1:exon

ATP13A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ATP13A3
product: ATPase 13A3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 177 samples with support for all annotated introns
transcript id: XM_010716366.3
SIO_010081: ATP13A3
subclass of: SO_0000673
so part of: ATP13A3
location: join(1341961..1342052,1359341..1359434,1361275..1361448,1362236..1362406,1362726..1362796,1365668..1365748,1366885..1366954,1367877..1368011,1369050..1369122,1369856..1369987,1370917..1371096,1372635..1372792,1373424..1373612,1374482..1374543,1375113..1375263,1375696..1375812,1376594..1376611,1376719..1376872,1376958..1377078,1377846..1377970,1378782..1378960,1379412..1379534,1379608..1379687,1380478..1380520,1380614..1380723,1381567..1381663,1382177..1382249,1383144..1383321,1383966..1384153,1385195..1385283,1385694..1386002)
location: region:1341961-1386002:1
so has part: feature:1341961-1342052:1:exon
so has part: feature:1359341-1359434:1:exon
so has part: feature:1361275-1361448:1:exon
so has part: feature:1362236-1362406:1:exon
so has part: feature:1362726-1362796:1:exon
so has part: feature:1365668-1365748:1:exon
so has part: feature:1366885-1366954:1:exon
so has part: feature:1367877-1368011:1:exon
so has part: feature:1369050-1369122:1:exon
so has part: feature:1369856-1369987:1:exon
so has part: feature:1370917-1371096:1:exon
so has part: feature:1372635-1372792:1:exon
so has part: feature:1373424-1373612:1:exon
so has part: feature:1374482-1374543:1:exon
so has part: feature:1375113-1375263:1:exon
so has part: feature:1375696-1375812:1:exon
so has part: feature:1376594-1376611:1:exon
so has part: feature:1376719-1376872:1:exon
so has part: feature:1376958-1377078:1:exon
so has part: feature:1377846-1377970:1:exon
so has part: feature:1378782-1378960:1:exon
so has part: feature:1379412-1379534:1:exon
so has part: feature:1379608-1379687:1:exon
so has part: feature:1380478-1380520:1:exon
so has part: feature:1380614-1380723:1:exon
so has part: feature:1381567-1381663:1:exon
so has part: feature:1382177-1382249:1:exon
so has part: feature:1383144-1383321:1:exon
so has part: feature:1383966-1384153:1:exon
so has part: feature:1385195-1385283:1:exon
so has part: feature:1385694-1386002:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1341961-1342052:1:exon

position:1342052:1
position: 1342052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1359341-1359434:1:exon

position:1359341:1
position: 1359341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359434:1
position: 1359434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1361275-1361448:1:exon

position:1361275:1
position: 1361275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1361448:1
position: 1361448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1362236-1362406:1:exon

position:1362236:1
position: 1362236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362406:1
position: 1362406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1362726-1362796:1:exon

position:1362726:1
position: 1362726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1362796:1
position: 1362796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1365668-1365748:1:exon

position:1365668:1
position: 1365668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365748:1
position: 1365748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1366885-1366954:1:exon

position:1366885:1
position: 1366885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1366954:1
position: 1366954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1367877-1368011:1:exon

position:1367877:1
position: 1367877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1368011:1
position: 1368011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1369050-1369122:1:exon

position:1369050:1
position: 1369050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369122:1
position: 1369122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1369856-1369987:1:exon

position:1369856:1
position: 1369856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1369987:1
position: 1369987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1370917-1371096:1:exon

position:1370917:1
position: 1370917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371096:1
position: 1371096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1372635-1372792:1:exon

position:1372635:1
position: 1372635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1372792:1
position: 1372792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1373424-1373612:1:exon

position:1373424:1
position: 1373424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1373612:1
position: 1373612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1374482-1374543:1:exon

position:1374482:1
position: 1374482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1374543:1
position: 1374543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1375113-1375263:1:exon

position:1375113:1
position: 1375113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375263:1
position: 1375263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1375696-1375812:1:exon

position:1375696:1
position: 1375696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1375812:1
position: 1375812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1376594-1376611:1:exon

position:1376594:1
position: 1376594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376611:1
position: 1376611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1376719-1376872:1:exon

position:1376719:1
position: 1376719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1376872:1
position: 1376872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1376958-1377078:1:exon

position:1376958:1
position: 1376958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377078:1
position: 1377078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1377846-1377970:1:exon

position:1377846:1
position: 1377846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377970:1
position: 1377970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1378782-1378960:1:exon

position:1378782:1
position: 1378782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378960:1
position: 1378960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1379412-1379534:1:exon

position:1379412:1
position: 1379412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379534:1
position: 1379534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1379608-1379687:1:exon

position:1379608:1
position: 1379608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1379687:1
position: 1379687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1380478-1380520:1:exon

position:1380478:1
position: 1380478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380520:1
position: 1380520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1380614-1380723:1:exon

position:1380614:1
position: 1380614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1380723:1
position: 1380723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1381567-1381663:1:exon

position:1381567:1
position: 1381567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381663:1
position: 1381663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1382177-1382249:1:exon

position:1382177:1
position: 1382177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382249:1
position: 1382249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1383144-1383321:1:exon

position:1383144:1
position: 1383144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1383321:1
position: 1383321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1383966-1384153:1:exon

position:1383966:1
position: 1383966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1384153:1
position: 1384153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1385195-1385283:1:exon

position:1385195:1
position: 1385195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385283:1
position: 1385283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1385694-1386002:1:exon

position:1385694:1
position: 1385694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP13A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ATP13A3
product: ATPase 13A3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 169 samples with support for all annotated introns
transcript id: XM_010716367.2
SIO_010081: ATP13A3
subclass of: SO_0000673
so part of: ATP13A3
location: join(1341982..1342132,1359341..1359434,1361275..1361448,1362236..1362406,1362726..1362796,1365668..1365748,1366885..1366954,1367877..1368011,1369050..1369122,1369856..1369987,1370917..1371096,1372635..1372792,1373424..1373612,1374482..1374543,1375113..1375263,1375696..1375812,1376594..1376611,1376719..1376872,1376958..1377078,1377846..1377970,1378782..1378960,1379412..1379534,1379608..1379687,1380478..1380520,1380614..1380723,1381567..1381663,1382177..1382249,1383144..1383321,1383966..1384153,1385195..1385283,1385694..1386002)
location: region:1341982-1386002:1
so has part: feature:1341982-1342132:1:exon
so has part: feature:1359341-1359434:1:exon
so has part: feature:1361275-1361448:1:exon
so has part: feature:1362236-1362406:1:exon
so has part: feature:1362726-1362796:1:exon
so has part: feature:1365668-1365748:1:exon
so has part: feature:1366885-1366954:1:exon
so has part: feature:1367877-1368011:1:exon
so has part: feature:1369050-1369122:1:exon
so has part: feature:1369856-1369987:1:exon
so has part: feature:1370917-1371096:1:exon
so has part: feature:1372635-1372792:1:exon
so has part: feature:1373424-1373612:1:exon
so has part: feature:1374482-1374543:1:exon
so has part: feature:1375113-1375263:1:exon
so has part: feature:1375696-1375812:1:exon
so has part: feature:1376594-1376611:1:exon
so has part: feature:1376719-1376872:1:exon
so has part: feature:1376958-1377078:1:exon
so has part: feature:1377846-1377970:1:exon
so has part: feature:1378782-1378960:1:exon
so has part: feature:1379412-1379534:1:exon
so has part: feature:1379608-1379687:1:exon
so has part: feature:1380478-1380520:1:exon
so has part: feature:1380614-1380723:1:exon
so has part: feature:1381567-1381663:1:exon
so has part: feature:1382177-1382249:1:exon
so has part: feature:1383144-1383321:1:exon
so has part: feature:1383966-1384153:1:exon
so has part: feature:1385195-1385283:1:exon
so has part: feature:1385694-1386002:1:exon

position:1341982:1
position: 1341982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341982-1342132:1:exon

position:1342132:1
position: 1342132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1359341-1359434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1361275-1361448:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1362236-1362406:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1362726-1362796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365668-1365748:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1366885-1366954:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1367877-1368011:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1369050-1369122:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1369856-1369987:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1370917-1371096:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1372635-1372792:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1373424-1373612:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1374482-1374543:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1375113-1375263:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1375696-1375812:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1376594-1376611:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1376719-1376872:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1376958-1377078:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1377846-1377970:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1378782-1378960:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1379412-1379534:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1379608-1379687:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1380478-1380520:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1380614-1380723:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1381567-1381663:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1382177-1382249:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1383144-1383321:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1383966-1384153:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1385195-1385283:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1385694-1386002:1:exon

ATP13A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ATP13A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cation-transporting ATPase 13A3
translation: MEKEEKKFVNKAEEEEMEIYGYELCRWKLVLVTVGVICSGGFLLLLLYWMPQWRVKATCKRTTLKDCEVVLLRTTDEFKIWFCAKVRVMPSLGASPLQNPDPIVHKVSNGHAVHFCESAAEENKNYLKKYLPIRYFTHHSVKYFWNDSAQSFDVVRGLDDSTFCSSIHNEHSRGLTKEMHDYRKMFFGINEIAVKVPSIFKLLIKEVLNPFYIFQLFSVILWITDEYHYYALAIVIMSVISIVSSLYTVRKQYVMLHDMVAAHSIVRVSVCRRNQEIEEILSTNLVPGDIMLIPSNGTIMPCDAVLLSGTCIVNESMLTGESVPVTKINLPNPSEYPKATGDEIYSPEAHKRHTLFCGTNVIQTRFYTGELVKALVVRTGFNTAKGQLVRSILYPKPTDFKLYRDAYWFLLSLVVVAGIGFIYTIVNSILNEVPAHTIIIESLDIITITVPPALPAAMTAGIVYAQRRLKKIGIFCISPQRINICGQLNLVCFDKTGTLTEDGLDLWGIQRVENARFLLPEERACSESLLKSEFIACMATCHSLTKIEGVLSGDPLDLKMFEAIGWILEEATEEETALHNRIMPTVVRPSKQLFPESKQATNQEMELFELSTTYEIGIVRQFPFSSVLQRMCVIARILGEKRMDAYMKGAPEVIASLCKQETVPVDFESVLEEYTKQGFRVIALAHRKLESKLTWHKVQTINRDAIESNMDFMGLIIMQNKLKQETPAVLEDLHKANIRTVMVTGDNMLTAISVARDCGMILPQDKVIIAEALPPKDGQAARINWHYADTLARCTSSSPAINSEDIPVKLVHESLEDLQMTKYHFAMNGKSFAVILEHFQDLVPKLVLHGTVFARMAPDQKTQLVEALQNVDYYVGMCGDGANDCGALKRAHGGISLSELEASVASPFTSRTPSISCVPKLIREGRAALITSFCVFKFMALYSIIQYISVTLLYSILSNLGDHQFLFIDLAIILVVVFTMSLNPAWKELVARRPPSGLISGPLLCSVLSQIIICLVFQTVGFLWVKQQPWFERWTPESDACNILDATNISSAHGGNETLDDEHNIKNYENTTLFFISSFQYLIVAIVFSKGKPFRQPCYKNFLFVTSVVVLYVFLFFIMLHPSELIDTSFELVCVPYEWRLRILIIVIVNAIVSVLMEVRNSNGKYLLLSVSPRL
SIO_010081: ATP13A3
subclass of: SO_0000673
so part of: ATP13A3
location: join(1359384..1359434,1361275..1361448,1362236..1362406,1362726..1362796,1365668..1365748,1366885..1366954,1367877..1368011,1369050..1369122,1369856..1369987,1370917..1371096,1372635..1372792,1373424..1373612,1374482..1374543,1375113..1375263,1375696..1375812,1376594..1376611,1376719..1376872,1376958..1377078,1377846..1377970,1378782..1378960,1379412..1379534,1379608..1379687,1380478..1380520,1380614..1380723,1381567..1381663,1382177..1382249,1383144..1383321,1383966..1384153,1385195..1385283,1385694..1385828)
location: region:1359384-1385828:1
so has part: feature:1359384-1359434:1:exon
so has part: feature:1361275-1361448:1:exon
so has part: feature:1362236-1362406:1:exon
so has part: feature:1362726-1362796:1:exon
so has part: feature:1365668-1365748:1:exon
so has part: feature:1366885-1366954:1:exon
so has part: feature:1367877-1368011:1:exon
so has part: feature:1369050-1369122:1:exon
so has part: feature:1369856-1369987:1:exon
so has part: feature:1370917-1371096:1:exon
so has part: feature:1372635-1372792:1:exon
so has part: feature:1373424-1373612:1:exon
so has part: feature:1374482-1374543:1:exon
so has part: feature:1375113-1375263:1:exon
so has part: feature:1375696-1375812:1:exon
so has part: feature:1376594-1376611:1:exon
so has part: feature:1376719-1376872:1:exon
so has part: feature:1376958-1377078:1:exon
so has part: feature:1377846-1377970:1:exon
so has part: feature:1378782-1378960:1:exon
so has part: feature:1379412-1379534:1:exon
so has part: feature:1379608-1379687:1:exon
so has part: feature:1380478-1380520:1:exon
so has part: feature:1380614-1380723:1:exon
so has part: feature:1381567-1381663:1:exon
so has part: feature:1382177-1382249:1:exon
so has part: feature:1383144-1383321:1:exon
so has part: feature:1383966-1384153:1:exon
so has part: feature:1385195-1385283:1:exon
so has part: feature:1385694-1385828:1:exon

XP_010714668.1
type: Protein
SIO_000068: ncbiprotein

position:1359384:1
position: 1359384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1385828:1
position: 1385828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359384-1359434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1361275-1361448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362236-1362406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1362726-1362796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365668-1365748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366885-1366954:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1367877-1368011:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369050-1369122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1369856-1369987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370917-1371096:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1372635-1372792:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1373424-1373612:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1374482-1374543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1375113-1375263:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1375696-1375812:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1376594-1376611:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1376719-1376872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1376958-1377078:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1377846-1377970:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1378782-1378960:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1379412-1379534:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1379608-1379687:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1380478-1380520:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1380614-1380723:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1381567-1381663:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1382177-1382249:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1383144-1383321:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1383966-1384153:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1385195-1385283:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1385694-1385828:1:exon

ATP13A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ATP13A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cation-transporting ATPase 13A3
translation: MEKEEKKFVNKAEEEEMEIYGYELCRWKLVLVTVGVICSGGFLLLLLYWMPQWRVKATCKRTTLKDCEVVLLRTTDEFKIWFCAKVRVMPSLGASPLQNPDPIVHKVSNGHAVHFCESAAEENKNYLKKYLPIRYFTHHSVKYFWNDSAQSFDVVRGLDDSTFCSSIHNEHSRGLTKEMHDYRKMFFGINEIAVKVPSIFKLLIKEVLNPFYIFQLFSVILWITDEYHYYALAIVIMSVISIVSSLYTVRKQYVMLHDMVAAHSIVRVSVCRRNQEIEEILSTNLVPGDIMLIPSNGTIMPCDAVLLSGTCIVNESMLTGESVPVTKINLPNPSEYPKATGDEIYSPEAHKRHTLFCGTNVIQTRFYTGELVKALVVRTGFNTAKGQLVRSILYPKPTDFKLYRDAYWFLLSLVVVAGIGFIYTIVNSILNEVPAHTIIIESLDIITITVPPALPAAMTAGIVYAQRRLKKIGIFCISPQRINICGQLNLVCFDKTGTLTEDGLDLWGIQRVENARFLLPEERACSESLLKSEFIACMATCHSLTKIEGVLSGDPLDLKMFEAIGWILEEATEEETALHNRIMPTVVRPSKQLFPESKQATNQEMELFELSTTYEIGIVRQFPFSSVLQRMCVIARILGEKRMDAYMKGAPEVIASLCKQETVPVDFESVLEEYTKQGFRVIALAHRKLESKLTWHKVQTINRDAIESNMDFMGLIIMQNKLKQETPAVLEDLHKANIRTVMVTGDNMLTAISVARDCGMILPQDKVIIAEALPPKDGQAARINWHYADTLARCTSSSPAINSEDIPVKLVHESLEDLQMTKYHFAMNGKSFAVILEHFQDLVPKLVLHGTVFARMAPDQKTQLVEALQNVDYYVGMCGDGANDCGALKRAHGGISLSELEASVASPFTSRTPSISCVPKLIREGRAALITSFCVFKFMALYSIIQYISVTLLYSILSNLGDHQFLFIDLAIILVVVFTMSLNPAWKELVARRPPSGLISGPLLCSVLSQIIICLVFQTVGFLWVKQQPWFERWTPESDACNILDATNISSAHGGNETLDDEHNIKNYENTTLFFISSFQYLIVAIVFSKGKPFRQPCYKNFLFVTSVVVLYVFLFFIMLHPSELIDTSFELVCVPYEWRLRILIIVIVNAIVSVLMEVRNSNGKYLLLSVSPRL
SIO_010081: ATP13A3
subclass of: SO_0000673
so part of: ATP13A3
location: join(1359384..1359434,1361275..1361448,1362236..1362406,1362726..1362796,1365668..1365748,1366885..1366954,1367877..1368011,1369050..1369122,1369856..1369987,1370917..1371096,1372635..1372792,1373424..1373612,1374482..1374543,1375113..1375263,1375696..1375812,1376594..1376611,1376719..1376872,1376958..1377078,1377846..1377970,1378782..1378960,1379412..1379534,1379608..1379687,1380478..1380520,1380614..1380723,1381567..1381663,1382177..1382249,1383144..1383321,1383966..1384153,1385195..1385283,1385694..1385828)
location: region:1359384-1385828:1
so has part: feature:1359384-1359434:1:exon
so has part: feature:1361275-1361448:1:exon
so has part: feature:1362236-1362406:1:exon
so has part: feature:1362726-1362796:1:exon
so has part: feature:1365668-1365748:1:exon
so has part: feature:1366885-1366954:1:exon
so has part: feature:1367877-1368011:1:exon
so has part: feature:1369050-1369122:1:exon
so has part: feature:1369856-1369987:1:exon
so has part: feature:1370917-1371096:1:exon
so has part: feature:1372635-1372792:1:exon
so has part: feature:1373424-1373612:1:exon
so has part: feature:1374482-1374543:1:exon
so has part: feature:1375113-1375263:1:exon
so has part: feature:1375696-1375812:1:exon
so has part: feature:1376594-1376611:1:exon
so has part: feature:1376719-1376872:1:exon
so has part: feature:1376958-1377078:1:exon
so has part: feature:1377846-1377970:1:exon
so has part: feature:1378782-1378960:1:exon
so has part: feature:1379412-1379534:1:exon
so has part: feature:1379608-1379687:1:exon
so has part: feature:1380478-1380520:1:exon
so has part: feature:1380614-1380723:1:exon
so has part: feature:1381567-1381663:1:exon
so has part: feature:1382177-1382249:1:exon
so has part: feature:1383144-1383321:1:exon
so has part: feature:1383966-1384153:1:exon
so has part: feature:1385195-1385283:1:exon
so has part: feature:1385694-1385828:1:exon

XP_010714669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1359384-1359434:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1361275-1361448:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362236-1362406:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1362726-1362796:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365668-1365748:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1366885-1366954:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1367877-1368011:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1369050-1369122:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1369856-1369987:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1370917-1371096:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1372635-1372792:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1373424-1373612:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1374482-1374543:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1375113-1375263:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1375696-1375812:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1376594-1376611:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1376719-1376872:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1376958-1377078:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1377846-1377970:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1378782-1378960:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1379412-1379534:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1379608-1379687:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1380478-1380520:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1380614-1380723:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1381567-1381663:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1382177-1382249:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1383144-1383321:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1383966-1384153:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1385195-1385283:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1385694-1385828:1:exon

LSG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LSG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1386111..1397444
location: region:1386111-1397444:1
so has part: feature:1386111-1397444:1:exon
subclass of: SO_0000010

100546761
type: Gene
SIO_000068: ncbigene

position:1386111:1
position: 1386111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1397444:1
position: 1397444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386111-1397444:1:exon

LSG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LSG1
product: large 60S subunit nuclear export GTPase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_019618925.1
SIO_010081: LSG1
subclass of: SO_0000673
so part of: LSG1
location: join(1386111..1386294,1387452..1387538,1388470..1388556,1390055..1390115,1390633..1390809,1391822..1392247,1392526..1392627,1393409..1393552,1393863..1393986,1394430..1394509,1395098..1395271,1396598..1397444)
location: region:1386111-1397444:1
so has part: feature:1386111-1386294:1:exon
so has part: feature:1387452-1387538:1:exon
so has part: feature:1388470-1388556:1:exon
so has part: feature:1390055-1390115:1:exon
so has part: feature:1390633-1390809:1:exon
so has part: feature:1391822-1392247:1:exon
so has part: feature:1392526-1392627:1:exon
so has part: feature:1393409-1393552:1:exon
so has part: feature:1393863-1393986:1:exon
so has part: feature:1394430-1394509:1:exon
so has part: feature:1395098-1395271:1:exon
so has part: feature:1396598-1397444:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1386111-1386294:1:exon

position:1386294:1
position: 1386294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1387452-1387538:1:exon

position:1387452:1
position: 1387452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387538:1
position: 1387538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1388470-1388556:1:exon

position:1388470:1
position: 1388470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1388556:1
position: 1388556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1390055-1390115:1:exon

position:1390055:1
position: 1390055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390115:1
position: 1390115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1390633-1390809:1:exon

position:1390633:1
position: 1390633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390809:1
position: 1390809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1391822-1392247:1:exon

position:1391822:1
position: 1391822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392247:1
position: 1392247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1392526-1392627:1:exon

position:1392526:1
position: 1392526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392627:1
position: 1392627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1393409-1393552:1:exon

position:1393409:1
position: 1393409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393552:1
position: 1393552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1393863-1393986:1:exon

position:1393863:1
position: 1393863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1393986:1
position: 1393986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1394430-1394509:1:exon

position:1394430:1
position: 1394430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1394509:1
position: 1394509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1395098-1395271:1:exon

position:1395098:1
position: 1395098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395271:1
position: 1395271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1396598-1397444:1:exon

position:1396598:1
position: 1396598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LSG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LSG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: large subunit GTPase 1 homolog
translation: MVSPTGYAERLNIQFVSAQSRTGLLTAQEAQHVRQLHEENRQFLRIPRRPYWDRTTSSEDLKQAERESFLEWRRQLAHLEEEKKLILTPFERNLEFWRQLWRVIERSDIVVQIVDARNPLLFRCQDLESYVKEVSNDKENMILINKADLLSEEQRAAWAQFFEKEGVKVVFWSALAESRRLSGEVKELDADSVADDLSDSEEESSSQEEDVTAEDSAESISTGSALQSENQCLLFDDDSSDEYEDCEDDEEDNWQTCSEDEGGDKVNAIAPKCMESTTDTVAVQHVVQEQNRNVKNFSHLVQRNELLEIFKTLHSGPRVKDGEVNVGLVGYPNVGKSSTINTILGDKKVSVSATPGHTKHFQTLYVEPGLCLCDCPGLVMPSFVSTKAEMICSGILPIDQMRDHVPPISLVCQHIPRNILEATYGISIIRPREDEDPDRKPTAEELLTAYGYMRGFMTAHGQPDQPRSARYVLKDYVSGKLLYCHPPPGIDPDGFQHQHERCPGSRTVQASGPEKPTKNTKAKQIENVVDKSFFHQENVRALMKGVRATMGYRPGSGLVSVPAHNAGSVVGKPWKKHGNRNKKEKVRRITKHLEN
SIO_010081: LSG1
subclass of: SO_0000673
so part of: LSG1
location: join(1386149..1386294,1387452..1387538,1388470..1388556,1390055..1390115,1390633..1390809,1391822..1392247,1392526..1392627,1393409..1393552,1393863..1393986,1394430..1394509,1395098..1395271,1396598..1396777)
location: region:1386149-1396777:1
so has part: feature:1386149-1386294:1:exon
so has part: feature:1387452-1387538:1:exon
so has part: feature:1388470-1388556:1:exon
so has part: feature:1390055-1390115:1:exon
so has part: feature:1390633-1390809:1:exon
so has part: feature:1391822-1392247:1:exon
so has part: feature:1392526-1392627:1:exon
so has part: feature:1393409-1393552:1:exon
so has part: feature:1393863-1393986:1:exon
so has part: feature:1394430-1394509:1:exon
so has part: feature:1395098-1395271:1:exon
so has part: feature:1396598-1396777:1:exon

XP_019474470.1
type: Protein
SIO_000068: ncbiprotein

position:1386149:1
position: 1386149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396777:1
position: 1396777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386149-1386294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1387452-1387538:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1388470-1388556:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1390055-1390115:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1390633-1390809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1391822-1392247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1392526-1392627:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1393409-1393552:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1393863-1393986:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1394430-1394509:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1395098-1395271:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1396598-1396777:1:exon

LOC104912533
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912533
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1407063..1410826
location: region:1407063-1410826:1
so has part: feature:1407063-1410826:1:exon
subclass of: SO_0000011

104912533
type: Gene
SIO_000068: ncbigene

position:1407063:1
position: 1407063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410826:1
position: 1410826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407063-1410826:1:exon

LOC104912533
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912533
product: uncharacterized LOC104912533, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XR_004160919.1
SIO_010081: LOC104912533
subclass of: SO_0000673
so part of: LOC104912533
location: join(1407063..1407350,1408321..1408366,1409014..1409240,1409912..1410030,1410317..1410826)
location: region:1407063-1410826:1
so has part: feature:1407063-1407350:1:exon
so has part: feature:1408321-1408366:1:exon
so has part: feature:1409014-1409240:1:exon
so has part: feature:1409912-1410030:1:exon
so has part: feature:1410317-1410826:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1407063-1407350:1:exon

position:1407350:1
position: 1407350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1408321-1408366:1:exon

position:1408321:1
position: 1408321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408366:1
position: 1408366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1409014-1409240:1:exon

position:1409014:1
position: 1409014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409240:1
position: 1409240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1409912-1410030:1:exon

position:1409912:1
position: 1409912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1410030:1
position: 1410030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1410317-1410826:1:exon

position:1410317:1
position: 1410317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912533
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912533
product: uncharacterized LOC104912533, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_002118412.2
SIO_010081: LOC104912533
subclass of: SO_0000673
so part of: LOC104912533
location: join(1407357..1408141,1408321..1408366,1409014..1409240,1409912..1410030,1410317..1410826)
location: region:1407357-1410826:1
so has part: feature:1407357-1408141:1:exon
so has part: feature:1408321-1408366:1:exon
so has part: feature:1409014-1409240:1:exon
so has part: feature:1409912-1410030:1:exon
so has part: feature:1410317-1410826:1:exon

position:1407357:1
position: 1407357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1407357-1408141:1:exon

position:1408141:1
position: 1408141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1408321-1408366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1409014-1409240:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1409912-1410030:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1410317-1410826:1:exon

FAM43A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FAM43A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1411545..1412847)
location: region:1411545-1412847:-1
so has part: feature:1411545-1412847:-1:exon
subclass of: SO_0000010

104912624
type: Gene
SIO_000068: ncbigene

position:1411545:-1
position: 1411545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412847:-1
position: 1412847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411545-1412847:-1:exon

FAM43A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FAM43A
product: family with sequence similarity 43 member A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555063.1
SIO_010081: FAM43A
subclass of: SO_0000673
so part of: FAM43A
location: complement(join(1411545..1411573,1411960..1412847))
location: region:1411545-1412847:-1
so has part: feature:1411960-1412847:-1:exon
so has part: feature:1411545-1411573:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1411960-1412847:-1:exon

position:1411960:-1
position: 1411960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1411545-1411573:-1:exon

position:1411573:-1
position: 1411573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM43A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FAM43A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM43A
translation: MLPWKRSKVELVAGEARRQSKPKGYAVSVHYSALTSLARACPESALHRVGSMFRSKRRKFRVTSEDPTYTVLYLGNATTIQSKGEGCTDLAVCKIWSKSEAGRQGTKMKLTISAQGIRMAHAEDKGLRRPGHLYLLHRVTYCVADPRLPRVFAWIYRHELKHKAVMLRCHAVLVSKPEKAKAMALLLYQTSATALAEFRRLKKRDDARHQQQQLVGEQSIPLVPLRKLLNGQCCYKPPVERSRSAPKLGSITEDLLGEEQEERAMHCDCEDILEALGEPEGELLRAGAGRSCCCKDVM
SIO_010081: FAM43A
subclass of: SO_0000673
so part of: FAM43A
location: complement(join(1411545..1411573,1411960..1412827))
location: region:1411545-1412827:-1
so has part: feature:1411960-1412827:-1:exon
so has part: feature:1411545-1411573:-1:exon

XP_031410923.1
type: Protein
SIO_000068: ncbiprotein

position:1412827:-1
position: 1412827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1411960-1412827:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1411545-1411573:-1:exon

XXYLT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: XXYLT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1428480..1444340
location: region:1428480-1444340:1
so has part: feature:1428480-1444340:1:exon
subclass of: SO_0000010

100546151
type: Gene
SIO_000068: ncbigene

position:1428480:1
position: 1428480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444340:1
position: 1444340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428480-1444340:1:exon

XXYLT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: XXYLT1
product: xyloside xylosyltransferase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010716369.2
SIO_010081: XXYLT1
subclass of: SO_0000673
so part of: XXYLT1
location: join(1428480..1428489,1428617..1428791,1443194..1444340)
location: region:1428480-1444340:1
so has part: feature:1428480-1428489:1:exon
so has part: feature:1428617-1428791:1:exon
so has part: feature:1443194-1444340:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1428480-1428489:1:exon

position:1428489:1
position: 1428489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1428617-1428791:1:exon

position:1428617:1
position: 1428617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428791:1
position: 1428791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1443194-1444340:1:exon

position:1443194:1
position: 1443194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XXYLT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: XXYLT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: xyloside xylosyltransferase 1
translation: MAEGFVSHYSFFLFVLSEITQIIQVDLDLKYKANIRDLFEEFDNFQEGAVIGIAREMQPVYRHTFWQYRRENPQTRVGEPPPDGLPGFNSGVLLLNLEAMRRSKLYNQLLEPGMVQKLTEKYHFKGHLGDQDFFTMVGMEHPELFHVLDCTWNRQLCTWWKDHGYSDVFDQYFRCDGEVKIYHGNCNTPIPED
SIO_010081: XXYLT1
subclass of: SO_0000673
so part of: XXYLT1
location: join(1428480..1428489,1428617..1428791,1443194..1443590)
location: region:1428480-1443590:1
so has part: feature:1428480-1428489:1:exon
so has part: feature:1428617-1428791:1:exon
so has part: feature:1443194-1443590:1:exon

XP_010714671.2
type: Protein
SIO_000068: ncbiprotein

position:1443590:1
position: 1443590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428480-1428489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1428617-1428791:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1443194-1443590:1:exon

LOC109369414
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369414
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1453517..1456366
location: region:1453517-1456366:1
so has part: feature:1453517-1456366:1:exon
subclass of: SO_0000011

109369414
type: Gene
SIO_000068: ncbigene

position:1453517:1
position: 1453517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456366:1
position: 1456366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1453517-1456366:1:exon

LOC109369414
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369414
product: uncharacterized LOC109369414
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002118415.1
SIO_010081: LOC109369414
subclass of: SO_0000673
so part of: LOC109369414
location: join(1453517..1453647,1453928..1453972,1454174..1456366)
location: region:1453517-1456366:1
so has part: feature:1453517-1453647:1:exon
so has part: feature:1453928-1453972:1:exon
so has part: feature:1454174-1456366:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1453517-1453647:1:exon

position:1453647:1
position: 1453647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1453928-1453972:1:exon

position:1453928:1
position: 1453928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453972:1
position: 1453972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1454174-1456366:1:exon

position:1454174:1
position: 1454174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ACAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1462755..1532022
location: region:1462755-1532022:1
so has part: feature:1462755-1532022:1:exon
subclass of: SO_0000010

100545744
type: Gene
SIO_000068: ncbigene

position:1462755:1
position: 1462755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1532022:1
position: 1532022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462755-1532022:1:exon

ACAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ACAP2
product: ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010716370.3
SIO_010081: ACAP2
subclass of: SO_0000673
so part of: ACAP2
location: join(1462755..1462877,1463297..1463444,1477594..1477633,1491196..1491253,1492876..1492995,1494342..1494395,1497285..1497343,1497843..1498026,1499482..1499526,1500525..1500620,1503553..1503627,1510012..1510124,1513452..1513472,1516098..1516149,1517521..1517621,1518444..1518549,1518969..1519177,1519381..1519450,1520617..1520711,1522128..1522315,1523134..1523226,1524175..1524362,1524716..1524825,1525834..1525944,1526210..1526271,1531110..1532022)
location: region:1462755-1532022:1
so has part: feature:1462755-1462877:1:exon
so has part: feature:1463297-1463444:1:exon
so has part: feature:1477594-1477633:1:exon
so has part: feature:1491196-1491253:1:exon
so has part: feature:1492876-1492995:1:exon
so has part: feature:1494342-1494395:1:exon
so has part: feature:1497285-1497343:1:exon
so has part: feature:1497843-1498026:1:exon
so has part: feature:1499482-1499526:1:exon
so has part: feature:1500525-1500620:1:exon
so has part: feature:1503553-1503627:1:exon
so has part: feature:1510012-1510124:1:exon
so has part: feature:1513452-1513472:1:exon
so has part: feature:1516098-1516149:1:exon
so has part: feature:1517521-1517621:1:exon
so has part: feature:1518444-1518549:1:exon
so has part: feature:1518969-1519177:1:exon
so has part: feature:1519381-1519450:1:exon
so has part: feature:1520617-1520711:1:exon
so has part: feature:1522128-1522315:1:exon
so has part: feature:1523134-1523226:1:exon
so has part: feature:1524175-1524362:1:exon
so has part: feature:1524716-1524825:1:exon
so has part: feature:1525834-1525944:1:exon
so has part: feature:1526210-1526271:1:exon
so has part: feature:1531110-1532022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1462755-1462877:1:exon

position:1462877:1
position: 1462877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1463297-1463444:1:exon

position:1463297:1
position: 1463297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1463444:1
position: 1463444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1477594-1477633:1:exon

position:1477594:1
position: 1477594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1477633:1
position: 1477633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1491196-1491253:1:exon

position:1491196:1
position: 1491196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1491253:1
position: 1491253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1492876-1492995:1:exon

position:1492876:1
position: 1492876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1492995:1
position: 1492995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1494342-1494395:1:exon

position:1494342:1
position: 1494342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1494395:1
position: 1494395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1497285-1497343:1:exon

position:1497285:1
position: 1497285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1497343:1
position: 1497343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1497843-1498026:1:exon

position:1497843:1
position: 1497843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1498026:1
position: 1498026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1499482-1499526:1:exon

position:1499482:1
position: 1499482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1499526:1
position: 1499526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1500525-1500620:1:exon

position:1500525:1
position: 1500525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1500620:1
position: 1500620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1503553-1503627:1:exon

position:1503553:1
position: 1503553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1503627:1
position: 1503627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1510012-1510124:1:exon

position:1510012:1
position: 1510012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1510124:1
position: 1510124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1513452-1513472:1:exon

position:1513452:1
position: 1513452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513472:1
position: 1513472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1516098-1516149:1:exon

position:1516098:1
position: 1516098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1516149:1
position: 1516149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1517521-1517621:1:exon

position:1517521:1
position: 1517521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1517621:1
position: 1517621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1518444-1518549:1:exon

position:1518444:1
position: 1518444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1518549:1
position: 1518549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1518969-1519177:1:exon

position:1518969:1
position: 1518969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519177:1
position: 1519177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1519381-1519450:1:exon

position:1519381:1
position: 1519381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1519450:1
position: 1519450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1520617-1520711:1:exon

position:1520617:1
position: 1520617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520711:1
position: 1520711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1522128-1522315:1:exon

position:1522128:1
position: 1522128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1522315:1
position: 1522315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1523134-1523226:1:exon

position:1523134:1
position: 1523134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1523226:1
position: 1523226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1524175-1524362:1:exon

position:1524175:1
position: 1524175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524362:1
position: 1524362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1524716-1524825:1:exon

position:1524716:1
position: 1524716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524825:1
position: 1524825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1525834-1525944:1:exon

position:1525834:1
position: 1525834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525944:1
position: 1525944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1526210-1526271:1:exon

position:1526210:1
position: 1526210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1526271:1
position: 1526271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1531110-1532022:1:exon

position:1531110:1
position: 1531110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ACAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ACAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2
translation: MSCPPVPPSPNGDVLCSFLHCWAEFQEIRARFLAVSQPAFMVIIHDVSELTEKLFPIVEAMQKHFSAGSGTYYSDSIFFLSVAMHRIMPKVLRNPPCTLAVELRAALEEVEGDVTELELKLDKLVKLCIAMIDTGKAFCLANKQFMNGIRDLAQYSCKDALVEANLSKFSDTLQEMINYHNILFDQTQRSIKAQLQTFVKEDIKKFKDAKKQFEKVSEEKENALVKNAQVQRNKQHEVEEATNILTATRKCFRHIALDYVLQINVLQSKRRSEILKSMLSFMYAHLTFFHQGYDLFSELGPYMKDLGAQLDQLAVDAAKEKRDMEQKHSTIQQKDYSGDDTKLEYNVDAANGIVMEGYLFKRASNAFKTWNRKKPDHIRRWFSIQNNQLVYQKKFKDNPTVVVEDLRLCTVKHCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSIATAYREKGDESEKQEKKSSPSTGSLESGSETKEKLLKGESALQRVQCIPGNAACCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDSWEPELLKLMCELGNDVINRIYEAKLEKVGVKKPQPGSQRQEKEAYIKAKYVERKFVEKQPAAAVSPLESRTKVLPQSQEEKRHSAPEKSLLAVEQGVASPRVRSSDSGIQQSVDDSREHLASTISANSLYEPEGEKQESSVFYDSRQLNPGLHLYRAAFEKNLPDMAEALAHGAEVNWVNMEENKATPLIQAVRGGSLVTCEFLLQNGANVNIRDMKGRGPLHHATVLGHTGQVCLFLKRGANQHATDEDGKDPLSIAVEAANADIVTLLRLARMNEEMRESEGLYGQPGDEIYQDIFRDFSQMASNNPEKLNRFQQSDSQKP
SIO_010081: ACAP2
subclass of: SO_0000673
so part of: ACAP2
location: join(1462755..1462877,1463297..1463444,1477594..1477633,1491196..1491253,1492876..1492995,1494342..1494395,1497285..1497343,1497843..1498026,1499482..1499526,1500525..1500620,1503553..1503627,1510012..1510124,1513452..1513472,1516098..1516149,1517521..1517621,1518444..1518549,1518969..1519177,1519381..1519450,1520617..1520711,1522128..1522315,1523134..1523226,1524175..1524362,1524716..1524825,1525834..1525944,1526210..1526271,1531110..1531213)
location: region:1462755-1531213:1
so has part: feature:1462755-1462877:1:exon
so has part: feature:1463297-1463444:1:exon
so has part: feature:1477594-1477633:1:exon
so has part: feature:1491196-1491253:1:exon
so has part: feature:1492876-1492995:1:exon
so has part: feature:1494342-1494395:1:exon
so has part: feature:1497285-1497343:1:exon
so has part: feature:1497843-1498026:1:exon
so has part: feature:1499482-1499526:1:exon
so has part: feature:1500525-1500620:1:exon
so has part: feature:1503553-1503627:1:exon
so has part: feature:1510012-1510124:1:exon
so has part: feature:1513452-1513472:1:exon
so has part: feature:1516098-1516149:1:exon
so has part: feature:1517521-1517621:1:exon
so has part: feature:1518444-1518549:1:exon
so has part: feature:1518969-1519177:1:exon
so has part: feature:1519381-1519450:1:exon
so has part: feature:1520617-1520711:1:exon
so has part: feature:1522128-1522315:1:exon
so has part: feature:1523134-1523226:1:exon
so has part: feature:1524175-1524362:1:exon
so has part: feature:1524716-1524825:1:exon
so has part: feature:1525834-1525944:1:exon
so has part: feature:1526210-1526271:1:exon
so has part: feature:1531110-1531213:1:exon

XP_010714672.2
type: Protein
SIO_000068: ncbiprotein

position:1531213:1
position: 1531213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1462755-1462877:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1463297-1463444:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1477594-1477633:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1491196-1491253:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1492876-1492995:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1494342-1494395:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1497285-1497343:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1497843-1498026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1499482-1499526:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1500525-1500620:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1503553-1503627:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1510012-1510124:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1513452-1513472:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1516098-1516149:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1517521-1517621:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1518444-1518549:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1518969-1519177:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1519381-1519450:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1520617-1520711:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1522128-1522315:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1523134-1523226:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1524175-1524362:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1524716-1524825:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1525834-1525944:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1526210-1526271:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1531110-1531213:1:exon

PPP1R2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PPP1R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1538654..1546843
location: region:1538654-1546843:1
so has part: feature:1538654-1546843:1:exon
subclass of: SO_0000010

100545591
type: Gene
SIO_000068: ncbigene

position:1538654:1
position: 1538654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1546843:1
position: 1546843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538654-1546843:1:exon

PPP1R2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: PPP1R2
product: protein phosphatase 1 regulatory inhibitor subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 143 samples with support for all annotated introns
transcript id: XR_002118416.2
SIO_010081: PPP1R2
so part of: PPP1R2
location: join(1538654..1538781,1539223..1539303,1539601..1539704,1540996..1541178,1542354..1542562,1544100..1544150,1545473..1546843)
location: region:1538654-1546843:1
so has part: feature:1538654-1538781:1:exon
so has part: feature:1539223-1539303:1:exon
so has part: feature:1539601-1539704:1:exon
so has part: feature:1540996-1541178:1:exon
so has part: feature:1542354-1542562:1:exon
so has part: feature:1544100-1544150:1:exon
so has part: feature:1545473-1546843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1538654-1538781:1:exon

position:1538781:1
position: 1538781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1539223-1539303:1:exon

position:1539223:1
position: 1539223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539303:1
position: 1539303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1539601-1539704:1:exon

position:1539601:1
position: 1539601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1539704:1
position: 1539704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1540996-1541178:1:exon

position:1540996:1
position: 1540996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541178:1
position: 1541178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1542354-1542562:1:exon

position:1542354:1
position: 1542354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1542562:1
position: 1542562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1544100-1544150:1:exon

position:1544100:1
position: 1544100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1544150:1
position: 1544150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1545473-1546843:1:exon

position:1545473:1
position: 1545473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP1R2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PPP1R2
product: protein phosphatase 1 regulatory inhibitor subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010716375.3
SIO_010081: PPP1R2
subclass of: SO_0000673
so part of: PPP1R2
location: join(1538654..1538781,1539223..1539303,1539601..1539704,1540996..1541178,1544100..1544150,1545473..1546843)
location: region:1538654-1546843:1
so has part: feature:1538654-1538781:1:exon
so has part: feature:1539223-1539303:1:exon
so has part: feature:1539601-1539704:1:exon
so has part: feature:1540996-1541178:1:exon
so has part: feature:1544100-1544150:1:exon
so has part: feature:1545473-1546843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1538654-1538781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539223-1539303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539601-1539704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1540996-1541178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1544100-1544150:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1545473-1546843:1:exon

PPP1R2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PPP1R2
product: protein phosphatase 1 regulatory inhibitor subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 184 samples with support for all annotated introns
transcript id: XM_010716374.3
SIO_010081: PPP1R2
subclass of: SO_0000673
so part of: PPP1R2
location: join(1538654..1538781,1539223..1539303,1539601..1539704,1540996..1541178,1545473..1546843)
location: region:1538654-1546843:1
so has part: feature:1538654-1538781:1:exon
so has part: feature:1539223-1539303:1:exon
so has part: feature:1539601-1539704:1:exon
so has part: feature:1540996-1541178:1:exon
so has part: feature:1545473-1546843:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1538654-1538781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539223-1539303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539601-1539704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1540996-1541178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1545473-1546843:1:exon

PPP1R2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PPP1R2
product: protein phosphatase 1 regulatory inhibitor subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_031555095.1
SIO_010081: PPP1R2
subclass of: SO_0000673
so part of: PPP1R2
location: join(1538654..1538781,1539223..1539303,1539601..1539704,1540996..1541178,1541739..1541957)
location: region:1538654-1541957:1
so has part: feature:1538654-1538781:1:exon
so has part: feature:1539223-1539303:1:exon
so has part: feature:1539601-1539704:1:exon
so has part: feature:1540996-1541178:1:exon
so has part: feature:1541739-1541957:1:exon

position:1541957:1
position: 1541957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538654-1538781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539223-1539303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539601-1539704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1540996-1541178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541739-1541957:1:exon

position:1541739:1
position: 1541739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP1R2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PPP1R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase inhibitor 2 isoform X2
translation: MNIIATYHPAGKDYGLMKIDEPSTPYHSMVGDDDEDAVSDSESNEPLRADVLSKKLAAAAEGKGPKVIARQEESSEEEEEEEELTPEEREKKKQFEMKRKMHYNEGRNIKLARQLIAKELHGEDEEEEEEDEEMRDAPDVETMNTEAIEHAHATHDQLESRARSIEEICPEL
SIO_010081: PPP1R2
subclass of: SO_0000673
so part of: PPP1R2
location: join(1538699..1538781,1539223..1539303,1539601..1539704,1540996..1541178,1545473..1545540)
location: region:1538699-1545540:1
so has part: feature:1538699-1538781:1:exon
so has part: feature:1539223-1539303:1:exon
so has part: feature:1539601-1539704:1:exon
so has part: feature:1540996-1541178:1:exon
so has part: feature:1545473-1545540:1:exon

XP_010714676.1
type: Protein
SIO_000068: ncbiprotein

position:1538699:1
position: 1538699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1545540:1
position: 1545540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538699-1538781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539223-1539303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539601-1539704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1540996-1541178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1545473-1545540:1:exon

PPP1R2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PPP1R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase inhibitor 2 isoform X3
translation: MNIIATYHPAGKDYGLMKIDEPSTPYHSMVGDDDEDAVSDSESNEPLRADVLSKKLAAAAEGKGPKVIARQEESSEEEEEEEELTPEEREKKKQFEMKRKMHYNEGRNIKLARQLIAKELHGEDEEEEEEDEEMRDAPDVETMNTEAIEHD
SIO_010081: PPP1R2
subclass of: SO_0000673
so part of: PPP1R2
location: join(1538699..1538781,1539223..1539303,1539601..1539704,1540996..1541178,1544100..1544104)
location: region:1538699-1544104:1
so has part: feature:1538699-1538781:1:exon
so has part: feature:1539223-1539303:1:exon
so has part: feature:1539601-1539704:1:exon
so has part: feature:1540996-1541178:1:exon
so has part: feature:1544100-1544104:1:exon

XP_010714677.1
type: Protein
SIO_000068: ncbiprotein

position:1544104:1
position: 1544104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538699-1538781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539223-1539303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539601-1539704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1540996-1541178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1544100-1544104:1:exon

PPP1R2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PPP1R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase inhibitor 2 isoform X1
translation: MNIIATYHPAGKDYGLMKIDEPSTPYHSMVGDDDEDAVSDSESNEPLRADVLSKKLAAAAEGKGPKVIARQEESSEEEEEEEELTPEEREKKKQFEMKRKMHYNEGRNIKLARQLIAKELHGEDEEEEEEDEEMRDAPDVETMNTEAIEHAQLLEESLGPWLGAVSGAFSAIFKLFSGTM
SIO_010081: PPP1R2
subclass of: SO_0000673
so part of: PPP1R2
location: join(1538699..1538781,1539223..1539303,1539601..1539704,1540996..1541178,1541739..1541830)
location: region:1538699-1541830:1
so has part: feature:1538699-1538781:1:exon
so has part: feature:1539223-1539303:1:exon
so has part: feature:1539601-1539704:1:exon
so has part: feature:1540996-1541178:1:exon
so has part: feature:1541739-1541830:1:exon

XP_031410955.1
type: Protein
SIO_000068: ncbiprotein

position:1541830:1
position: 1541830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1538699-1538781:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1539223-1539303:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1539601-1539704:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1540996-1541178:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1541739-1541830:1:exon

LOC100545437
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100545437
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1547597..1565420
location: region:1547597-1565420:1
so has part: feature:1547597-1565420:1:exon
subclass of: SO_0000010

100545437
type: Gene
SIO_000068: ncbigene

position:1547597:1
position: 1547597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1565420:1
position: 1565420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1547597-1565420:1:exon

LOC100545437
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545437
product: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XM_010716377.3
SIO_010081: LOC100545437
subclass of: SO_0000673
so part of: LOC100545437
location: join(1547597..1548052,1551892..1552002,1558178..1558319,1561748..1561900,1563382..1565420)
location: region:1547597-1565420:1
so has part: feature:1547597-1548052:1:exon
so has part: feature:1551892-1552002:1:exon
so has part: feature:1558178-1558319:1:exon
so has part: feature:1561748-1561900:1:exon
so has part: feature:1563382-1565420:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1547597-1548052:1:exon

position:1548052:1
position: 1548052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1551892-1552002:1:exon

position:1551892:1
position: 1551892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1552002:1
position: 1552002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1558178-1558319:1:exon

position:1558178:1
position: 1558178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1558319:1
position: 1558319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1561748-1561900:1:exon

position:1561748:1
position: 1561748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1561900:1
position: 1561900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1563382-1565420:1:exon

position:1563382:1
position: 1563382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100545437
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545437
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-beta-hydroxybutyrate dehydrogenase, mitochondrial-like
translation: MDGAQVGLQPLPLEAFQAEGKAVLITGCDKGFGHALAKQLHAKGFTVFAGCLLADKNGDGARELKDMKSDRMKVLQMNVCSDQEVAEAVDYVKMTLKDPEEGLWGLVNNAGVSTFGEVEFTSLDNYKEVTDINLWGTVRVTKAFLPLIRRAKGRVVNITSMLGRMVSPSRSCYCISKFGVAAFSDCLRQEMYRWGVKVILIEPSNFVAATGILTEDGIDKQAEVLWSGTSNTVREDYGREYFTRHVALMKSFVNSGLKDMSLVLNDITNALISAHPNNRYNPMETYWWMRLQVMTHLPTAIADWLYIPGATL
SIO_010081: LOC100545437
subclass of: SO_0000673
so part of: LOC100545437
location: join(1548002..1548052,1551892..1552002,1558178..1558319,1561748..1561900,1563382..1563863)
location: region:1548002-1563863:1
so has part: feature:1548002-1548052:1:exon
so has part: feature:1551892-1552002:1:exon
so has part: feature:1558178-1558319:1:exon
so has part: feature:1561748-1561900:1:exon
so has part: feature:1563382-1563863:1:exon

XP_010714679.1
type: Protein
SIO_000068: ncbiprotein

position:1548002:1
position: 1548002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1563863:1
position: 1563863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1548002-1548052:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1551892-1552002:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1558178-1558319:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1561748-1561900:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1563382-1563863:1:exon

APOD
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: APOD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1573040..1576404
location: region:1573040-1576404:1
so has part: feature:1573040-1576404:1:exon
subclass of: SO_0000010

100544663
type: Gene
SIO_000068: ncbigene

position:1573040:1
position: 1573040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1576404:1
position: 1576404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573040-1576404:1:exon

APOD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: APOD
product: apolipoprotein D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XM_003209101.3
SIO_010081: APOD
subclass of: SO_0000673
so part of: APOD
location: join(1573040..1573145,1573569..1573714,1573983..1574104,1574989..1575077,1575486..1576404)
location: region:1573040-1576404:1
so has part: feature:1573040-1573145:1:exon
so has part: feature:1573569-1573714:1:exon
so has part: feature:1573983-1574104:1:exon
so has part: feature:1574989-1575077:1:exon
so has part: feature:1575486-1576404:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1573040-1573145:1:exon

position:1573145:1
position: 1573145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1573569-1573714:1:exon

position:1573569:1
position: 1573569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1573714:1
position: 1573714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1573983-1574104:1:exon

position:1573983:1
position: 1573983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574104:1
position: 1574104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1574989-1575077:1:exon

position:1574989:1
position: 1574989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575077:1
position: 1575077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1575486-1576404:1:exon

position:1575486:1
position: 1575486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APOD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: APOD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: apolipoprotein D
translation: MLGTAVQLSVLLGLLGLGNAQMFHMGPCPDPPVQQNFDINKYLGKWYEIEKLPSNFEKGSCVQANYSLKENGKFKVINKEMLSSGKINEIEGEIMHTDVKEPAKLGVRFNWFMPSAPYWVISTDYENYSLVYSCTNILWLFHFDYAWIMSRAPDMHPDTVEHLKSMLQSYKIDTDKMMPTDQLNCPAEM
SIO_010081: APOD
subclass of: SO_0000673
so part of: APOD
location: join(1573592..1573714,1573983..1574104,1574989..1575077,1575486..1575721)
location: region:1573592-1575721:1
so has part: feature:1573592-1573714:1:exon
so has part: feature:1573983-1574104:1:exon
so has part: feature:1574989-1575077:1:exon
so has part: feature:1575486-1575721:1:exon

XP_003209149.1
type: Protein
SIO_000068: ncbiprotein

position:1573592:1
position: 1573592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1575721:1
position: 1575721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573592-1573714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1573983-1574104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1574989-1575077:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1575486-1575721:1:exon

BDH1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: BDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1602203..1614904)
location: region:1602203-1614904:-1
so has part: feature:1602203-1614904:-1:exon
subclass of: SO_0000010

100544505
type: Gene
SIO_000068: ncbigene

position:1602203:-1
position: 1602203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1614904:-1
position: 1614904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1602203-1614904:-1:exon

BDH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: BDH1
product: 3-hydroxybutyrate dehydrogenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003209100.4
SIO_010081: BDH1
subclass of: SO_0000673
so part of: BDH1
location: complement(join(1602203..1604052,1604885..1605037,1605829..1605970,1611241..1611351,1612775..1612847,1614748..1614904))
location: region:1602203-1614904:-1
so has part: feature:1614748-1614904:-1:exon
so has part: feature:1612775-1612847:-1:exon
so has part: feature:1611241-1611351:-1:exon
so has part: feature:1605829-1605970:-1:exon
so has part: feature:1604885-1605037:-1:exon
so has part: feature:1602203-1604052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1614748-1614904:-1:exon

position:1614748:-1
position: 1614748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1612775-1612847:-1:exon

position:1612775:-1
position: 1612775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1612847:-1
position: 1612847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1611241-1611351:-1:exon

position:1611241:-1
position: 1611241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1611351:-1
position: 1611351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1605829-1605970:-1:exon

position:1605829:-1
position: 1605829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605970:-1
position: 1605970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1604885-1605037:-1:exon

position:1604885:-1
position: 1604885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1605037:-1
position: 1605037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1602203-1604052:-1:exon

position:1604052:-1
position: 1604052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BDH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: BDH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: D-beta-hydroxybutyrate dehydrogenase, mitochondrial
translation: MLATKLSRPLLNLPVKTLTFKNPGNKSRPVQKFCFPLLSSCGSRSYASEVDQIGSRAVLITGCDSGFGFALAKHLHTKGFIIYAGCLQKNKGEGGSKELDNMNSDRMRTVQLNVCDSKEVDRAVEHVNSSLEDPEKGLWGLVNNAGISTFGEVEFTSMDTYMEVAEVNLWGTVRTTKAFLPLIRRSKGRVVNISSMMGRMGSPARSPYCITKFGVEAFSDCLRYEMQPQGVMVSIVEPGNFIAATNLYSPERIKAIADKMWDELPEIVRKDYGRKYFDEQVSKMETYCNSGSTDTSPVIESVAHALTSTAPYTRYHPMDYYWWLRMQIMTHMPAAISDRLYVY
SIO_010081: BDH1
subclass of: SO_0000673
so part of: BDH1
location: complement(join(1603583..1604052,1604885..1605037,1605829..1605970,1611241..1611351,1612775..1612847,1614748..1614830))
location: region:1603583-1614830:-1
so has part: feature:1614748-1614830:-1:exon
so has part: feature:1612775-1612847:-1:exon
so has part: feature:1611241-1611351:-1:exon
so has part: feature:1605829-1605970:-1:exon
so has part: feature:1604885-1605037:-1:exon
so has part: feature:1603583-1604052:-1:exon

XP_003209148.1
type: Protein
SIO_000068: ncbiprotein

position:1603583:-1
position: 1603583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1614830:-1
position: 1614830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1614748-1614830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1612775-1612847:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1611241-1611351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1605829-1605970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1604885-1605037:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1603583-1604052:-1:exon

LOC109369416
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369416
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1623023..1649880)
location: region:1623023-1649880:-1
so has part: feature:1623023-1649880:-1:exon
subclass of: SO_0000011

109369416
type: Gene
SIO_000068: ncbigene

position:1623023:-1
position: 1623023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1649880:-1
position: 1649880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1623023-1649880:-1:exon

LOC109369416
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369416
product: uncharacterized LOC109369416
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002118423.1
SIO_010081: LOC109369416
subclass of: SO_0000673
so part of: LOC109369416
location: complement(join(1623023..1623041,1636292..1636458,1649722..1649880))
location: region:1623023-1649880:-1
so has part: feature:1649722-1649880:-1:exon
so has part: feature:1636292-1636458:-1:exon
so has part: feature:1623023-1623041:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1649722-1649880:-1:exon

position:1649722:-1
position: 1649722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1636292-1636458:-1:exon

position:1636292:-1
position: 1636292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1636458:-1
position: 1636458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1623023-1623041:-1:exon

position:1623041:-1
position: 1623041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DLG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1657734..1730893)
location: region:1657734-1730893:-1
so has part: feature:1657734-1730893:-1:exon
subclass of: SO_0000010

100545279
type: Gene
SIO_000068: ncbigene

position:1657734:-1
position: 1657734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1730893:-1
position: 1730893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657734-1730893:-1:exon

DLG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DLG1
product: discs large MAGUK scaffold protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019618854.1
SIO_010081: DLG1
subclass of: SO_0000673
so part of: DLG1
location: complement(join(1657734..1657829,1659900..1659999,1664373..1664442,1664918..1665094,1670657..1670771,1680168..1680270,1681434..1681590,1683529..1683655,1687583..1687727,1688463..1688599,1689241..1689410,1690552..1690676,1690887..1690937,1694486..1694539,1698511..1698609,1728945..1729142,1730708..1730893))
location: region:1657734-1730893:-1
so has part: feature:1730708-1730893:-1:exon
so has part: feature:1728945-1729142:-1:exon
so has part: feature:1698511-1698609:-1:exon
so has part: feature:1694486-1694539:-1:exon
so has part: feature:1690887-1690937:-1:exon
so has part: feature:1690552-1690676:-1:exon
so has part: feature:1689241-1689410:-1:exon
so has part: feature:1688463-1688599:-1:exon
so has part: feature:1687583-1687727:-1:exon
so has part: feature:1683529-1683655:-1:exon
so has part: feature:1681434-1681590:-1:exon
so has part: feature:1680168-1680270:-1:exon
so has part: feature:1670657-1670771:-1:exon
so has part: feature:1664918-1665094:-1:exon
so has part: feature:1664373-1664442:-1:exon
so has part: feature:1659900-1659999:-1:exon
so has part: feature:1657734-1657829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1730708-1730893:-1:exon

position:1730708:-1
position: 1730708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1728945-1729142:-1:exon

position:1728945:-1
position: 1728945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1729142:-1
position: 1729142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1698511-1698609:-1:exon

position:1698511:-1
position: 1698511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698609:-1
position: 1698609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1694486-1694539:-1:exon

position:1694486:-1
position: 1694486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694539:-1
position: 1694539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1690887-1690937:-1:exon

position:1690887:-1
position: 1690887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690937:-1
position: 1690937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1690552-1690676:-1:exon

position:1690552:-1
position: 1690552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1690676:-1
position: 1690676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1689241-1689410:-1:exon

position:1689241:-1
position: 1689241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689410:-1
position: 1689410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1688463-1688599:-1:exon

position:1688463:-1
position: 1688463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1688599:-1
position: 1688599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1687583-1687727:-1:exon

position:1687583:-1
position: 1687583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687727:-1
position: 1687727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1683529-1683655:-1:exon

position:1683529:-1
position: 1683529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1683655:-1
position: 1683655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1681434-1681590:-1:exon

position:1681434:-1
position: 1681434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1681590:-1
position: 1681590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1680168-1680270:-1:exon

position:1680168:-1
position: 1680168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1680270:-1
position: 1680270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1670657-1670771:-1:exon

position:1670657:-1
position: 1670657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1670771:-1
position: 1670771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1664918-1665094:-1:exon

position:1664918:-1
position: 1664918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665094:-1
position: 1665094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1664373-1664442:-1:exon

position:1664373:-1
position: 1664373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664442:-1
position: 1664442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1659900-1659999:-1:exon

position:1659900:-1
position: 1659900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659999:-1
position: 1659999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1657734-1657829:-1:exon

position:1657829:-1
position: 1657829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DLG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 1
translation: MGFRFKSDSRINLTEGDERIPVPVVAAPGEGRNGLLGMALFEQAGSPECSVSIRRPGSSRGDWADLCFKCFLQKYRYQDEDTPPQEHSSPHIANEVTGPELVHVSEKNLSQIENVHGFVSHSHISPVKPTEAVPSSSPIVPVIPVPPVPAETTVIPSTIPQANPPPVLVNTDSLDTPTYVNGTDADYEYEEITLERGNSGLGFSIAGGTDNPHIGDDSGIFITKIIAGGAAAQDGRLRVNDCILRVNEVDVRDVTHSKAVEALKEAGSIVRLYVKRRKPVTEKVVEIKLVKGPKGLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVCLEEVTHEEAVTALKNTSDFVYLKVAKPTSMFMNDSYAPPDITNSYSQPVDNHITPSAYLGQSLPPASPGRYSPIPKGMLGDDEITREPRKVVLHRGSTGLGFNIVGGEDGEGIFISFILAGGPADLSGELRKGDRIISVNGVDLKAATHEQAATALKNAGQAVTIVAQYRPEEYSRFEAKIHDLREQMMNSSISSGSGSLRTSQKRSLYVRALFDYDKTKDSGLPSQGLNFKFGDILHVINASDDEWWQARQVTPDGESDEIGVIPSKRRVEKKERARLKTVKFNSKTRGEKGQSFNDKRKKNLFSRKFPFYKNKDQSEQETSDIDQHVTSNASDSESSYRKCF
SIO_010081: DLG1
subclass of: SO_0000673
so part of: DLG1
location: complement(join(1657774..1657829,1659900..1659999,1664373..1664442,1664918..1665094,1670657..1670771,1680168..1680270,1681434..1681590,1683529..1683655,1687583..1687727,1688463..1688599,1689241..1689410,1690552..1690676,1690887..1690937,1694486..1694539,1698511..1698609,1728945..1729142,1730708..1730893))
location: region:1657774-1730893:-1
so has part: feature:1730708-1730893:-1:exon
so has part: feature:1728945-1729142:-1:exon
so has part: feature:1698511-1698609:-1:exon
so has part: feature:1694486-1694539:-1:exon
so has part: feature:1690887-1690937:-1:exon
so has part: feature:1690552-1690676:-1:exon
so has part: feature:1689241-1689410:-1:exon
so has part: feature:1688463-1688599:-1:exon
so has part: feature:1687583-1687727:-1:exon
so has part: feature:1683529-1683655:-1:exon
so has part: feature:1681434-1681590:-1:exon
so has part: feature:1680168-1680270:-1:exon
so has part: feature:1670657-1670771:-1:exon
so has part: feature:1664918-1665094:-1:exon
so has part: feature:1664373-1664442:-1:exon
so has part: feature:1659900-1659999:-1:exon
so has part: feature:1657774-1657829:-1:exon

XP_019474399.1
type: Protein
SIO_000068: ncbiprotein

position:1657774:-1
position: 1657774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1730708-1730893:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1728945-1729142:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1698511-1698609:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1694486-1694539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1690887-1690937:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1690552-1690676:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1689241-1689410:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1688463-1688599:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1687583-1687727:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1683529-1683655:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1681434-1681590:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1680168-1680270:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1670657-1670771:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1664918-1665094:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1664373-1664442:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1659900-1659999:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1657774-1657829:-1:exon

MELTF
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MELTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1734539..1752092)
location: region:1734539-1752092:-1
so has part: feature:1734539-1752092:-1:exon
subclass of: SO_0000010

100546306
type: Gene
SIO_000068: ncbigene

position:1734539:-1
position: 1734539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1752092:-1
position: 1752092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1734539-1752092:-1:exon

MELTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MELTF
product: melanotransferrin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_010716380.3
SIO_010081: MELTF
subclass of: SO_0000673
so part of: MELTF
location: complement(join(1734539..1734714,1735749..1735947,1736363..1736550,1736654..1736721,1738338..1738494,1739627..1739821,1740630..1740726,1741200..1741351,1742219..1742399,1742798..1742985,1743747..1743814,1744745..1744901,1745204..1745386,1746052..1746151,1748600..1748754,1751853..1752092))
location: region:1734539-1752092:-1
so has part: feature:1751853-1752092:-1:exon
so has part: feature:1748600-1748754:-1:exon
so has part: feature:1746052-1746151:-1:exon
so has part: feature:1745204-1745386:-1:exon
so has part: feature:1744745-1744901:-1:exon
so has part: feature:1743747-1743814:-1:exon
so has part: feature:1742798-1742985:-1:exon
so has part: feature:1742219-1742399:-1:exon
so has part: feature:1741200-1741351:-1:exon
so has part: feature:1740630-1740726:-1:exon
so has part: feature:1739627-1739821:-1:exon
so has part: feature:1738338-1738494:-1:exon
so has part: feature:1736654-1736721:-1:exon
so has part: feature:1736363-1736550:-1:exon
so has part: feature:1735749-1735947:-1:exon
so has part: feature:1734539-1734714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1751853-1752092:-1:exon

position:1751853:-1
position: 1751853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1748600-1748754:-1:exon

position:1748600:-1
position: 1748600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1748754:-1
position: 1748754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1746052-1746151:-1:exon

position:1746052:-1
position: 1746052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1746151:-1
position: 1746151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1745204-1745386:-1:exon

position:1745204:-1
position: 1745204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745386:-1
position: 1745386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1744745-1744901:-1:exon

position:1744745:-1
position: 1744745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1744901:-1
position: 1744901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1743747-1743814:-1:exon

position:1743747:-1
position: 1743747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1743814:-1
position: 1743814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1742798-1742985:-1:exon

position:1742798:-1
position: 1742798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742985:-1
position: 1742985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1742219-1742399:-1:exon

position:1742219:-1
position: 1742219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1742399:-1
position: 1742399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1741200-1741351:-1:exon

position:1741200:-1
position: 1741200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1741351:-1
position: 1741351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1740630-1740726:-1:exon

position:1740630:-1
position: 1740630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740726:-1
position: 1740726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1739627-1739821:-1:exon

position:1739627:-1
position: 1739627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1739821:-1
position: 1739821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1738338-1738494:-1:exon

position:1738338:-1
position: 1738338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1738494:-1
position: 1738494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1736654-1736721:-1:exon

position:1736654:-1
position: 1736654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736721:-1
position: 1736721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1736363-1736550:-1:exon

position:1736363:-1
position: 1736363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736550:-1
position: 1736550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1735749-1735947:-1:exon

position:1735749:-1
position: 1735749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735947:-1
position: 1735947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1734539-1734714:-1:exon

position:1734714:-1
position: 1734714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MELTF
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MELTF
product: melanotransferrin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 100 samples with support for all annotated introns
transcript id: XM_003209112.4
SIO_010081: MELTF
subclass of: SO_0000673
so part of: MELTF
location: complement(join(1734539..1735947,1736363..1736550,1736654..1736721,1738338..1738494,1739627..1739821,1740630..1740726,1741200..1741351,1742219..1742399,1742798..1742985,1743747..1743814,1744745..1744901,1745204..1745386,1746052..1746151,1748600..1748754,1751853..1752091))
location: region:1734539-1752091:-1
so has part: feature:1751853-1752091:-1:exon
so has part: feature:1748600-1748754:-1:exon
so has part: feature:1746052-1746151:-1:exon
so has part: feature:1745204-1745386:-1:exon
so has part: feature:1744745-1744901:-1:exon
so has part: feature:1743747-1743814:-1:exon
so has part: feature:1742798-1742985:-1:exon
so has part: feature:1742219-1742399:-1:exon
so has part: feature:1741200-1741351:-1:exon
so has part: feature:1740630-1740726:-1:exon
so has part: feature:1739627-1739821:-1:exon
so has part: feature:1738338-1738494:-1:exon
so has part: feature:1736654-1736721:-1:exon
so has part: feature:1736363-1736550:-1:exon
so has part: feature:1734539-1735947:-1:exon

position:1752091:-1
position: 1752091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1751853-1752091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1748600-1748754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1746052-1746151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1745204-1745386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1744745-1744901:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1743747-1743814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1742798-1742985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1742219-1742399:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1741200-1741351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740630-1740726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1739627-1739821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1738338-1738494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1736654-1736721:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1736363-1736550:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1734539-1735947:-1:exon

MELTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MELTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: melanotransferrin isoform X2
translation: MKISENVFFLLLVHSALGLERVRWCTVSNQELSKCKDMSNAFAGAGILPPLECMEGESAANCTQMIKNYLADAVTLDGRWIYQAGKEYGLKPVVGEVYDQEIGTSYYAVAVVRKGSNITINSLKGIRSCHTGINRTAGWNVPVGYLIDSGRLPAMACDLPKAVSDYFSASCIPGANSANYPTSLCQLCKGDSSGQNKCQGNSQEQYYDYSGAFRCLAEGAGEVAFVKHSTVPENTDGRTLSTWAQQLRSKDFQLLCRNGSTADVTEWRTCHLARVPARAVVVRPDTDGTAVFQLLNQGQQRFNGVGTQFQMFDSTAYGAQNLMFRDSTTELVAVTSQNYQAWLGDEYLHVMQALSCDPNTLPESLNWCVVSTEEIWKCGEMGTAFRNKDLKPEIQCISAKTKEECMEMIQKKEIDVVALGGADIYIAGKTYGLVPAAGESFSAEDNNNAYYAVALVKRNPSNAFTISDLKGKKSCHTGLGRTAGWNIPIGMLIKKGFINPRDCNIPQAVSEFFSASCVPSAEQDNYPSTLCQLCIGDNSGNNKCSASSQERYYSYSGAFRCLAEDAGDVAFVKHSTVFENTDGKNTESWAHDLKSSDFQLLCRNGARAEVTQFAQCHLARVPAQAIMVHPDTNIFALYGLLDKAQDYFGNNSNRNGFKMFDSSAFQGKDLIFKDSAVKIVPVEDRRTYAEWLGSEYIESLEGMQTPQCSGAAALTTRAAALLAGSILLTTAATS
SIO_010081: MELTF
subclass of: SO_0000673
so part of: MELTF
location: complement(join(1734644..1734714,1735749..1735947,1736363..1736550,1736654..1736721,1738338..1738494,1739627..1739821,1740630..1740726,1741200..1741351,1742219..1742399,1742798..1742985,1743747..1743814,1744745..1744901,1745204..1745386,1746052..1746151,1748600..1748754,1751853..1751898))
location: region:1734644-1751898:-1
so has part: feature:1751853-1751898:-1:exon
so has part: feature:1748600-1748754:-1:exon
so has part: feature:1746052-1746151:-1:exon
so has part: feature:1745204-1745386:-1:exon
so has part: feature:1744745-1744901:-1:exon
so has part: feature:1743747-1743814:-1:exon
so has part: feature:1742798-1742985:-1:exon
so has part: feature:1742219-1742399:-1:exon
so has part: feature:1741200-1741351:-1:exon
so has part: feature:1740630-1740726:-1:exon
so has part: feature:1739627-1739821:-1:exon
so has part: feature:1738338-1738494:-1:exon
so has part: feature:1736654-1736721:-1:exon
so has part: feature:1736363-1736550:-1:exon
so has part: feature:1735749-1735947:-1:exon
so has part: feature:1734644-1734714:-1:exon

XP_010714682.1
type: Protein
SIO_000068: ncbiprotein

position:1734644:-1
position: 1734644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1751898:-1
position: 1751898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1751853-1751898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1748600-1748754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1746052-1746151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1745204-1745386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1744745-1744901:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1743747-1743814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1742798-1742985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1742219-1742399:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1741200-1741351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740630-1740726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1739627-1739821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1738338-1738494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1736654-1736721:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1736363-1736550:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1735749-1735947:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1734644-1734714:-1:exon

MELTF
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MELTF
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: melanotransferrin isoform X1
translation: MKISENVFFLLLVHSALGLERVRWCTVSNQELSKCKDMSNAFAGAGILPPLECMEGESAANCTQMIKNYLADAVTLDGRWIYQAGKEYGLKPVVGEVYDQEIGTSYYAVAVVRKGSNITINSLKGIRSCHTGINRTAGWNVPVGYLIDSGRLPAMACDLPKAVSDYFSASCIPGANSANYPTSLCQLCKGDSSGQNKCQGNSQEQYYDYSGAFRCLAEGAGEVAFVKHSTVPENTDGRTLSTWAQQLRSKDFQLLCRNGSTADVTEWRTCHLARVPARAVVVRPDTDGTAVFQLLNQGQQRFNGVGTQFQMFDSTAYGAQNLMFRDSTTELVAVTSQNYQAWLGDEYLHVMQALSCDPNTLPESLNWCVVSTEEIWKCGEMGTAFRNKDLKPEIQCISAKTKEECMEMIQKKEIDVVALGGADIYIAGKTYGLVPAAGESFSAEDNNNAYYAVALVKRNPSNAFTISDLKGKKSCHTGLGRTAGWNIPIGMLIKKGFINPRDCNIPQAVSEFFSASCVPSAEQDNYPSTLCQLCIGDNSGNNKCSASSQERYYSYSGAFRCLAEDAGDVAFVKHSTVFENTDGKNTESWAHDLKSSDFQLLCRNGARAEVTQFAQCHLARVPAQAIMVHPDTNIFALYGLLDKAQDYFGNNSNRNGFKMFDSSAFQGKDLIFKDSAVKIVPVEDRRTYAEWLGSEYIESLEGMQTPQCSGAGNKLIQQHLLVITFIPFIILGQLQGLG
SIO_010081: MELTF
subclass of: SO_0000673
so part of: MELTF
location: complement(join(1735666..1735947,1736363..1736550,1736654..1736721,1738338..1738494,1739627..1739821,1740630..1740726,1741200..1741351,1742219..1742399,1742798..1742985,1743747..1743814,1744745..1744901,1745204..1745386,1746052..1746151,1748600..1748754,1751853..1751898))
location: region:1735666-1751898:-1
so has part: feature:1751853-1751898:-1:exon
so has part: feature:1748600-1748754:-1:exon
so has part: feature:1746052-1746151:-1:exon
so has part: feature:1745204-1745386:-1:exon
so has part: feature:1744745-1744901:-1:exon
so has part: feature:1743747-1743814:-1:exon
so has part: feature:1742798-1742985:-1:exon
so has part: feature:1742219-1742399:-1:exon
so has part: feature:1741200-1741351:-1:exon
so has part: feature:1740630-1740726:-1:exon
so has part: feature:1739627-1739821:-1:exon
so has part: feature:1738338-1738494:-1:exon
so has part: feature:1736654-1736721:-1:exon
so has part: feature:1736363-1736550:-1:exon
so has part: feature:1735666-1735947:-1:exon

XP_003209160.1
type: Protein
SIO_000068: ncbiprotein

position:1735666:-1
position: 1735666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1751853-1751898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1748600-1748754:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1746052-1746151:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1745204-1745386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1744745-1744901:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1743747-1743814:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1742798-1742985:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1742219-1742399:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1741200-1741351:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1740630-1740726:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1739627-1739821:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1738338-1738494:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1736654-1736721:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1736363-1736550:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1735666-1735947:-1:exon

LOC104912625
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1752628..>1762809)
location: region:1752628-1762809:-1
so has part: feature:1752628-1762809:-1:exon
subclass of: SO_0000010

104912625
type: Gene
SIO_000068: ncbigene

position:1752628:-1
position: 1752628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1762809:-1
position: 1762809
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1752628-1762809:-1:exon

LOC104912625
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912625
product: disks large homolog 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_010716635.2
SIO_010081: LOC104912625
subclass of: SO_0000673
so part of: LOC104912625
location: complement(join(1752628..1754359,1756796..1756887,1757276..1757385,1759064..1759236,1759485..1759586,1761116..1761166,1762677..>1762809))
location: region:1752628-1762809:-1
so has part: feature:1762677-1762809:-1:exon
so has part: feature:1761116-1761166:-1:exon
so has part: feature:1759485-1759586:-1:exon
so has part: feature:1759064-1759236:-1:exon
so has part: feature:1757276-1757385:-1:exon
so has part: feature:1756796-1756887:-1:exon
so has part: feature:1752628-1754359:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1762677-1762809:-1:exon

position:1762677:-1
position: 1762677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1761116-1761166:-1:exon

position:1761116:-1
position: 1761116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1761166:-1
position: 1761166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1759485-1759586:-1:exon

position:1759485:-1
position: 1759485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759586:-1
position: 1759586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1759064-1759236:-1:exon

position:1759064:-1
position: 1759064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759236:-1
position: 1759236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1757276-1757385:-1:exon

position:1757276:-1
position: 1757276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1757385:-1
position: 1757385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1756796-1756887:-1:exon

position:1756796:-1
position: 1756796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1756887:-1
position: 1756887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1752628-1754359:-1:exon

position:1754359:-1
position: 1754359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912625
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912625
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 1-like
translation: YYEYYGFTYLNVEFEALFIKIIFLISSYCCLKVILITDEYGCSKGGQEEYVLSYEQVNQQEVNYTRPVIVLGPMKDRINDDLISEFPDKFGSCVPHTTRPKRDYEVDGRDYHFVTSREQMEKDIQEHKFIEAGQYNNHLYGTSVQSVREVAEKGKHCILDVSGNAIKRLQIAQLYPISIFIKPKTVENIMEMNKRLTEEQARKTFERAMKLEQEFTEHFTAIIQGDTLEEIYNQVKQIIEEQSGPYIWVPAKEKL
SIO_010081: LOC104912625
subclass of: SO_0000673
so part of: LOC104912625
location: complement(join(1754253..1754359,1756796..1756887,1757276..1757385,1759064..1759236,1759485..1759586,1761116..1761166,1762677..>1762809))
location: region:1754253-1762809:-1
so has part: feature:1762677-1762809:-1:exon
so has part: feature:1761116-1761166:-1:exon
so has part: feature:1759485-1759586:-1:exon
so has part: feature:1759064-1759236:-1:exon
so has part: feature:1757276-1757385:-1:exon
so has part: feature:1756796-1756887:-1:exon
so has part: feature:1754253-1754359:-1:exon

XP_010714937.1
type: Protein
SIO_000068: ncbiprotein

position:1754253:-1
position: 1754253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1762677-1762809:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1761116-1761166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1759485-1759586:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1759064-1759236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1757276-1757385:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1756796-1756887:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1754253-1754359:-1:exon

PIGZ
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PIGZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1763919..>1766702)
location: region:1763919-1766702:-1
so has part: feature:1763919-1766702:-1:exon
subclass of: SO_0000010

100545123
type: Gene
SIO_000068: ncbigene

position:1763919:-1
position: 1763919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1766702:-1
position: 1766702
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763919-1766702:-1:exon

PIGZ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PIGZ
product: phosphatidylinositol glycan anchor biosynthesis class Z
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010716636.2
SIO_010081: PIGZ
subclass of: SO_0000673
so part of: PIGZ
location: complement(1763919..>1766702)
location: region:1763919-1766702:-1
so has part: feature:1763919-1766702:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1763919-1766702:-1:exon

PIGZ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PIGZ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GPI mannosyltransferase 4
translation: FVGDVLNLRVYYPWEFLSSSPCRTAVFPLLTSGVAYWVLKALQQLDVCSRCVSSYTLLVSPRLLLTVFSFVLDYSVHRLAPAWGADPWEALLLLAGSYVTLVFYTRTFTNTLEGFLFALLLVLVSANKSDSGITKPTHSPLLGVVIAAGFFNRPTFLAFALMPLLYWAGLNADSQKSIKTLVSPFIKLITCACFTAVVFITADTMYFTSVGLDSLFSFTNSSLFDVIALLNHRVVVTPFNFLCYNLDSRNLAQHGSHPRVTHFLVNGVMLFGILHLLAIDAGFKMLKKYIHQLMRVRLYYRGPPRLSVHSDGQPTLLLFYFVPLALLSLFSHQEPRFLIPLILPLVLFSASQNRAVKWKPIIIIFNVLGAFLFGCLHQGGLIPCFFHLEHVLHSSDSSNYPRHYTLLFAHTYMPPRSLLNIKKKDTHVEVIDMAGSEEETLCRMVGQHANNCTCSDCHFLVIIPGTVRATITKCGVSLKNETLIFPHLSMEDPPQISFLFSGDWKSQLGLYILQLGRAQQRL
SIO_010081: PIGZ
subclass of: SO_0000673
so part of: PIGZ
location: complement(1765134..>1766702)
location: region:1765134-1766702:-1
so has part: feature:1765134-1766702:-1:exon

XP_010714938.1
type: Protein
SIO_000068: ncbiprotein

position:1765134:-1
position: 1765134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1765134-1766702:-1:exon

AGTR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
alternative label: AGTR1B
alternative label: AT1
gene: AGTR1
gene synonym: AGTR1B; AT1
note: angiotensin II receptor type 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: <1767694..1769515
location: region:1767694-1769515:1
so has part: feature:1767694-1769515:1:exon
subclass of: SO_0000010

100303701
type: Gene
SIO_000068: ncbigene

position:1767694:1
position: 1767694
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1769515:1
position: 1769515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1767694-1769515:1:exon

AGTR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
alternative label: AGTR1B
alternative label: AT1
gene: AGTR1
gene synonym: AGTR1B; AT1
product: angiotensin II receptor type 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001303191.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript aligns at 89% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001303191.1
SIO_010081: AGTR1
subclass of: SO_0000673
so part of: AGTR1
location: <1767694..1769515
location: region:1767694-1769515:1
so has part: feature:1767694-1769515:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1767694-1769515:1:exon

AGTR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
alternative label: AGTR1B
alternative label: AT1
gene: AGTR1
gene synonym: AGTR1B; AT1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: type-1 angiotensin II receptor
translation: MVPNYSTEETVKRIHVDCPVSGRHSYIYIMVPTVYSIIFIIGIFGNSLVVIVIYCYMKLKTVASIFLLNLALADLCFLITLPLWAAYTAMEYQWPFGNCLCKLASAGISFNLYASVFLLTCLSIDRYLAIVHPVKSRIRRTMFVARVTCIVIWLLAGVASLPVIIHRNIFFAENLNMTVCGFRYDNNNTTLRVGLGLSKNLLGFLIPFLIILTSYTLIWKTLKKAYQIQRNKTRNDDIFKMIVAIVFFFFFSWIPHQVFTFLDVLIQLHVITDCKITDIVDTAMPFTICIAYFNNCLNPFFYVFFGKNFKKYFLQLIKYIPPNVSTHPSLTTKMSSLSYRPPENIRLPTKKTAGSFDTE
SIO_010081: AGTR1
subclass of: SO_0000673
so part of: AGTR1
location: 1767749..1768828
location: region:1767749-1768828:1
so has part: feature:1767749-1768828:1:exon

NP_001290120.1
type: Protein
SIO_000068: ncbiprotein

position:1767749:1
position: 1767749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1768828:1
position: 1768828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1767749-1768828:1:exon

CPB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CPB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1792719..1809464
location: region:1792719-1809464:1
so has part: feature:1792719-1809464:1:exon
subclass of: SO_0000010

100544821
type: Gene
SIO_000068: ncbigene

position:1792719:1
position: 1792719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1809464:1
position: 1809464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1792719-1809464:1:exon

CPB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CPB1
product: carboxypeptidase B1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_003209102.3
SIO_010081: CPB1
subclass of: SO_0000673
so part of: CPB1
location: join(1792719..1792826,1792930..1793005,1794942..1795066,1796696..1796795,1797530..1797631,1798370..1798471,1799893..1800003,1800099..1800189,1800804..1801006,1808725..1808809,1808996..1809464)
location: region:1792719-1809464:1
so has part: feature:1792719-1792826:1:exon
so has part: feature:1792930-1793005:1:exon
so has part: feature:1794942-1795066:1:exon
so has part: feature:1796696-1796795:1:exon
so has part: feature:1797530-1797631:1:exon
so has part: feature:1798370-1798471:1:exon
so has part: feature:1799893-1800003:1:exon
so has part: feature:1800099-1800189:1:exon
so has part: feature:1800804-1801006:1:exon
so has part: feature:1808725-1808809:1:exon
so has part: feature:1808996-1809464:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1792719-1792826:1:exon

position:1792826:1
position: 1792826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1792930-1793005:1:exon

position:1792930:1
position: 1792930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1793005:1
position: 1793005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1794942-1795066:1:exon

position:1794942:1
position: 1794942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795066:1
position: 1795066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1796696-1796795:1:exon

position:1796696:1
position: 1796696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1796795:1
position: 1796795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1797530-1797631:1:exon

position:1797530:1
position: 1797530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1797631:1
position: 1797631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1798370-1798471:1:exon

position:1798370:1
position: 1798370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1798471:1
position: 1798471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1799893-1800003:1:exon

position:1799893:1
position: 1799893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800003:1
position: 1800003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1800099-1800189:1:exon

position:1800099:1
position: 1800099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800189:1
position: 1800189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1800804-1801006:1:exon

position:1800804:1
position: 1800804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1801006:1
position: 1801006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1808725-1808809:1:exon

position:1808725:1
position: 1808725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1808809:1
position: 1808809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1808996-1809464:1:exon

position:1808996:1
position: 1808996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CPB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase B
translation: MWAFLVLVGAAVASAHLQDLTFDGHKVFRVIPQNDEQVEIIHSLASKMQVDFWQPDYVNLVKPKMQVDFRVEADKALEVEHLLKENKMDYKVLIDNLQTALHAQFDSKVRSTGHSYEKYNTWDKIAAWTADIAAQNPNLVSRSVIGETYEGRPLYLLKLGKSGTNKKAIFMDCGFHAREWISPAFCQWFVKEAVETYGTDSTMTKLLNSLDFYVLPVVNIDGYVYTWTNDRMWRKTRSKNTGSICIGTDPNRNFNAGWCKLGASNRPCDSTYCGSSPESEKETKALADFIREHLSTIKAYLTIHSYSQLLLFPYSYTYALPQDYNELNTIASAATEKLTSLYNTKYVYGPGATTIYPAAGGSDDWAYDQGIKYSFTFELRDTGNYGFLLPESQIKPTCEETLLAVKYIASYVLDHLY
SIO_010081: CPB1
subclass of: SO_0000673
so part of: CPB1
location: join(1792756..1792826,1792930..1793005,1794942..1795066,1796696..1796795,1797530..1797631,1798370..1798471,1799893..1800003,1800099..1800189,1800804..1801006,1808725..1808809,1808996..1809183)
location: region:1792756-1809183:1
so has part: feature:1792756-1792826:1:exon
so has part: feature:1792930-1793005:1:exon
so has part: feature:1794942-1795066:1:exon
so has part: feature:1796696-1796795:1:exon
so has part: feature:1797530-1797631:1:exon
so has part: feature:1798370-1798471:1:exon
so has part: feature:1799893-1800003:1:exon
so has part: feature:1800099-1800189:1:exon
so has part: feature:1800804-1801006:1:exon
so has part: feature:1808725-1808809:1:exon
so has part: feature:1808996-1809183:1:exon

XP_003209150.1
type: Protein
SIO_000068: ncbiprotein

position:1792756:1
position: 1792756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1809183:1
position: 1809183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1792756-1792826:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1792930-1793005:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1794942-1795066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1796696-1796795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1797530-1797631:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1798370-1798471:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1799893-1800003:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1800099-1800189:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1800804-1801006:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1808725-1808809:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1808996-1809183:1:exon

NCBP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1820625..1823941)
location: region:1820625-1823941:-1
so has part: feature:1820625-1823941:-1:exon
subclass of: SO_0000010

100544974
type: Gene
SIO_000068: ncbigene

position:1820625:-1
position: 1820625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823941:-1
position: 1823941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1820625-1823941:-1:exon

NCBP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NCBP2
product: nuclear cap binding protein subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010716382.3
SIO_010081: NCBP2
subclass of: SO_0000673
so part of: NCBP2
location: complement(join(1820625..1822605,1823179..1823317,1823529..1823710,1823800..1823941))
location: region:1820625-1823941:-1
so has part: feature:1823800-1823941:-1:exon
so has part: feature:1823529-1823710:-1:exon
so has part: feature:1823179-1823317:-1:exon
so has part: feature:1820625-1822605:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1823800-1823941:-1:exon

position:1823800:-1
position: 1823800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1823529-1823710:-1:exon

position:1823529:-1
position: 1823529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823710:-1
position: 1823710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1823179-1823317:-1:exon

position:1823179:-1
position: 1823179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823317:-1
position: 1823317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1820625-1822605:-1:exon

position:1822605:-1
position: 1822605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCBP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NCBP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear cap-binding protein subunit 2
translation: MCSGGTLSILRSDSYVDLSQYRDQHFRGTRYDQERLLRKSCTLYVGNLSFYTTEEQIHELFGKSGDIKKIIMGLDKVKKTACGFCFVEYYARGDAENAMRYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYRQDYDAGRGGYGKTVQCQ
SIO_010081: NCBP2
subclass of: SO_0000673
so part of: NCBP2
location: complement(join(1822534..1822605,1823179..1823317,1823529..1823710,1823800..1823880))
location: region:1822534-1823880:-1
so has part: feature:1823800-1823880:-1:exon
so has part: feature:1823529-1823710:-1:exon
so has part: feature:1823179-1823317:-1:exon
so has part: feature:1822534-1822605:-1:exon

XP_010714684.1
type: Protein
SIO_000068: ncbiprotein

position:1822534:-1
position: 1822534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1823880:-1
position: 1823880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1823800-1823880:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1823529-1823710:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1823179-1823317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1822534-1822605:-1:exon

LOC109363678
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109363678
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1836729..1842471
location: region:1836729-1842471:1
so has part: feature:1836729-1842471:1:exon
subclass of: SO_0000011

109363678
type: Gene
SIO_000068: ncbigene

position:1836729:1
position: 1836729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1842471:1
position: 1842471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1836729-1842471:1:exon

LOC109363678
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109363678
product: uncharacterized LOC109363678
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XR_794719.3
SIO_010081: LOC109363678
subclass of: SO_0000673
so part of: LOC109363678
location: join(1836729..1836885,1841587..1841691,1842420..1842471)
location: region:1836729-1842471:1
so has part: feature:1836729-1836885:1:exon
so has part: feature:1841587-1841691:1:exon
so has part: feature:1842420-1842471:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1836729-1836885:1:exon

position:1836885:1
position: 1836885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1841587-1841691:1:exon

position:1841587:1
position: 1841587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841691:1
position: 1841691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1842420-1842471:1:exon

position:1842420:1
position: 1842420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912536
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912536
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1936242..1947032)
location: region:1936242-1947032:-1
so has part: feature:1936242-1947032:-1:exon
subclass of: SO_0000011

104912536
type: Gene
SIO_000068: ncbigene

position:1936242:-1
position: 1936242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947032:-1
position: 1947032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1936242-1947032:-1:exon

LOC104912536
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912536
product: uncharacterized LOC104912536, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004160898.1
SIO_010081: LOC104912536
subclass of: SO_0000673
so part of: LOC104912536
location: complement(join(1936242..1936303,1937981..1938134,1940102..1940350,1940443..1940632,1941581..1941697,1946970..1947032))
location: region:1936242-1947032:-1
so has part: feature:1946970-1947032:-1:exon
so has part: feature:1941581-1941697:-1:exon
so has part: feature:1940443-1940632:-1:exon
so has part: feature:1940102-1940350:-1:exon
so has part: feature:1937981-1938134:-1:exon
so has part: feature:1936242-1936303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1946970-1947032:-1:exon

position:1946970:-1
position: 1946970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1941581-1941697:-1:exon

position:1941581:-1
position: 1941581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1941697:-1
position: 1941697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1940443-1940632:-1:exon

position:1940443:-1
position: 1940443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940632:-1
position: 1940632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1940102-1940350:-1:exon

position:1940102:-1
position: 1940102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940350:-1
position: 1940350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1937981-1938134:-1:exon

position:1937981:-1
position: 1937981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1938134:-1
position: 1938134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1936242-1936303:-1:exon

position:1936303:-1
position: 1936303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912536
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912536
product: uncharacterized LOC104912536, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004160897.1
SIO_010081: LOC104912536
subclass of: SO_0000673
so part of: LOC104912536
location: complement(join(1936242..1936303,1937981..1938134,1940102..1940632,1941581..1941697,1946970..1947032))
location: region:1936242-1947032:-1
so has part: feature:1946970-1947032:-1:exon
so has part: feature:1941581-1941697:-1:exon
so has part: feature:1940102-1940632:-1:exon
so has part: feature:1937981-1938134:-1:exon
so has part: feature:1936242-1936303:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1946970-1947032:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1941581-1941697:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1940102-1940632:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1937981-1938134:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1936242-1936303:-1:exon

LOC116217043
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217043
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1959858..1973551)
location: region:1959858-1973551:-1
so has part: feature:1959858-1973551:-1:exon
subclass of: SO_0000011

116217043
type: Gene
SIO_000068: ncbigene

position:1959858:-1
position: 1959858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973551:-1
position: 1973551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1959858-1973551:-1:exon

LOC116217043
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217043
product: uncharacterized LOC116217043
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004160920.1
SIO_010081: LOC116217043
subclass of: SO_0000673
so part of: LOC116217043
location: complement(join(1959858..1960071,1971099..1971182,1972612..1972770,1973491..1973551))
location: region:1959858-1973551:-1
so has part: feature:1973491-1973551:-1:exon
so has part: feature:1972612-1972770:-1:exon
so has part: feature:1971099-1971182:-1:exon
so has part: feature:1959858-1960071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1973491-1973551:-1:exon

position:1973491:-1
position: 1973491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1972612-1972770:-1:exon

position:1972612:-1
position: 1972612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1972770:-1
position: 1972770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1971099-1971182:-1:exon

position:1971099:-1
position: 1971099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1971182:-1
position: 1971182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1959858-1960071:-1:exon

position:1960071:-1
position: 1960071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217037
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2056538..2070493)
location: region:2056538-2070493:-1
so has part: feature:2056538-2070493:-1:exon
subclass of: SO_0000011

116217037
type: Gene
SIO_000068: ncbigene

position:2056538:-1
position: 2056538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2070493:-1
position: 2070493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2056538-2070493:-1:exon

LOC116217037
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217037
product: uncharacterized LOC116217037
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004160899.1
SIO_010081: LOC116217037
subclass of: SO_0000673
so part of: LOC116217037
location: complement(join(2056538..2056685,2057936..2058100,2070364..2070493))
location: region:2056538-2070493:-1
so has part: feature:2070364-2070493:-1:exon
so has part: feature:2057936-2058100:-1:exon
so has part: feature:2056538-2056685:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2070364-2070493:-1:exon

position:2070364:-1
position: 2070364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2057936-2058100:-1:exon

position:2057936:-1
position: 2057936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2058100:-1
position: 2058100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2056538-2056685:-1:exon

position:2056685:-1
position: 2056685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ZIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2297995..>2299060
location: region:2297995-2299060:1
so has part: feature:2297995-2299060:1:exon
subclass of: SO_0000010

104912626
type: Gene
SIO_000068: ncbigene

position:2297995:1
position: 2297995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299060:1
position: 2299060
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2297995-2299060:1:exon

ZIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZIC1
product: Zic family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010716637.1
SIO_010081: ZIC1
subclass of: SO_0000673
so part of: ZIC1
location: 2297995..>2299060
location: region:2297995-2299060:1
so has part: feature:2297995-2299060:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2297995-2299060:1:exon

ZIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 1
translation: MLLDAGPQYPAIGVTTFGSSRHHSAADVTDREVGLGINPFADGMGAFKLNPGGHELASAGQTAFTSQAPGYAAALGHHHHPPHVGSYSSAAFNSTRDFLFRNRGFGEAAAASAQHSLFASAAGGFGGPHGHGDAAGHILFPGLHEQAAGHASPNVVNGQMRLGFSGDMYGRAEQYGQVTSPRSEHYASSQLHGYGHMNMNMAAHHGAGAFFRYMRQPIKQELICKWIEPEQLANPKKSCNKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKAKYKLVNHIR
SIO_010081: ZIC1
subclass of: SO_0000673
so part of: ZIC1
location: 2298188..>2299060
location: region:2298188-2299060:1
so has part: feature:2298188-2299060:1:exon

XP_010714939.1
type: Protein
SIO_000068: ncbiprotein

position:2298188:1
position: 2298188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2298188-2299060:1:exon

ZIC4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ZIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2310048..2318320)
location: region:2310048-2318320:-1
so has part: feature:2310048-2318320:-1:exon
subclass of: SO_0000010

116217039
type: Gene
SIO_000068: ncbigene

position:2310048:-1
position: 2310048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2318320:-1
position: 2318320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2310048-2318320:-1:exon

ZIC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZIC4
product: Zic family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555065.1
SIO_010081: ZIC4
subclass of: SO_0000673
so part of: ZIC4
location: complement(join(2310048..2310245,2310528..2311109,2317897..2318068,2318214..2318320))
location: region:2310048-2318320:-1
so has part: feature:2318214-2318320:-1:exon
so has part: feature:2317897-2318068:-1:exon
so has part: feature:2310528-2311109:-1:exon
so has part: feature:2310048-2310245:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2318214-2318320:-1:exon

position:2318214:-1
position: 2318214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2317897-2318068:-1:exon

position:2317897:-1
position: 2317897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2318068:-1
position: 2318068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2310528-2311109:-1:exon

position:2310528:-1
position: 2310528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2311109:-1
position: 2311109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2310048-2310245:-1:exon

position:2310245:-1
position: 2310245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZIC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZIC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein ZIC 4
translation: MPSRSQSAVIRPSVGFIFVEKDSSKRCTVNVVYDIREGDSNDSLNIARSAACKRRTRCPEFSPTSPVLFSSAPHSAVPGGQLRSREVPDSRGWGQRALFTQNEHFASKFSLSGGFVLRTKPHVDTEGRGGKSGLGPSAPAAGPDGQEESATGKGRGRRDPRGAAPGETCRAEEGESGVGVRGLPGGPGANGCALPLPPVGEKPFKCEFEGCDRRFANSSDRKKHSHVHTSDKPYNCKVRGCDKSYTHPSSLRKHMKVHCKSPPPSSGYESSTPSLVSPSSDSGRDPPFCFGQREFQMFDLNNTDIFHEHCHPWTPCARRYGELQVLNLGREKREEPPVLFRPVRFEMSFADL
SIO_010081: ZIC4
subclass of: SO_0000673
so part of: ZIC4
location: complement(join(2310048..2310245,2310528..2311109,2317897..2318068,2318214..2318320))
location: region:2310048-2318320:-1
so has part: feature:2318214-2318320:-1:exon
so has part: feature:2317897-2318068:-1:exon
so has part: feature:2310528-2311109:-1:exon
so has part: feature:2310048-2310245:-1:exon

XP_031410925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2318214-2318320:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2317897-2318068:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2310528-2311109:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2310048-2310245:-1:exon

LOC104912540
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2624395..2630305)
location: region:2624395-2630305:-1
so has part: feature:2624395-2630305:-1:exon
subclass of: SO_0000011

104912540
type: Gene
SIO_000068: ncbigene

position:2624395:-1
position: 2624395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2630305:-1
position: 2630305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2624395-2630305:-1:exon

LOC104912540
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912540
product: uncharacterized LOC104912540
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_794724.3
SIO_010081: LOC104912540
subclass of: SO_0000673
so part of: LOC104912540
location: complement(join(2624395..2625167,2627430..2627512,2630169..2630305))
location: region:2624395-2630305:-1
so has part: feature:2630169-2630305:-1:exon
so has part: feature:2627430-2627512:-1:exon
so has part: feature:2624395-2625167:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2630169-2630305:-1:exon

position:2630169:-1
position: 2630169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2627430-2627512:-1:exon

position:2627430:-1
position: 2627430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2627512:-1
position: 2627512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2624395-2625167:-1:exon

position:2625167:-1
position: 2625167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100544347
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2635613..2651988)
location: region:2635613-2651988:-1
so has part: feature:2635613-2651988:-1:exon
subclass of: SO_0000010

100544347
type: Gene
SIO_000068: ncbigene

position:2635613:-1
position: 2635613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2651988:-1
position: 2651988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2635613-2651988:-1:exon

LOC100544347
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544347
product: phospholipid scramblase family member 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555066.1
SIO_010081: LOC100544347
subclass of: SO_0000673
so part of: LOC100544347
location: complement(join(2635613..2636372,2636459..2636537,2637013..2637174,2638043..2638204,2639209..2639429,2640223..2640265,2643547..2643698,2651943..2651988))
location: region:2635613-2651988:-1
so has part: feature:2651943-2651988:-1:exon
so has part: feature:2643547-2643698:-1:exon
so has part: feature:2640223-2640265:-1:exon
so has part: feature:2639209-2639429:-1:exon
so has part: feature:2638043-2638204:-1:exon
so has part: feature:2637013-2637174:-1:exon
so has part: feature:2636459-2636537:-1:exon
so has part: feature:2635613-2636372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2651943-2651988:-1:exon

position:2651943:-1
position: 2651943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2643547-2643698:-1:exon

position:2643547:-1
position: 2643547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2643698:-1
position: 2643698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2640223-2640265:-1:exon

position:2640223:-1
position: 2640223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2640265:-1
position: 2640265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2639209-2639429:-1:exon

position:2639209:-1
position: 2639209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2639429:-1
position: 2639429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2638043-2638204:-1:exon

position:2638043:-1
position: 2638043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2638204:-1
position: 2638204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2637013-2637174:-1:exon

position:2637013:-1
position: 2637013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2637174:-1
position: 2637174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2636459-2636537:-1:exon

position:2636459:-1
position: 2636459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2636537:-1
position: 2636537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2635613-2636372:-1:exon

position:2636372:-1
position: 2636372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100544347
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544347
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase family member 5
translation: MSALLGDALCCYLITESEGQTNPVFKDYLPGSSDLPEQDKPAEPADPWKQDSHTHNLPPGLEYLNQLDRIIIHQQVELLEAILGTETCSKYEIKNHLGQRVYFAVEENGCFNRNLCSPIRSFTIRIADNSGREVITVNRPLRCNSCWFPCFLQELEVQSPPGTVAGYVVQNWDPFLPKFTIQNESKEDVLKIIGPYATCGCFEDVDFEVKALNEMSTIGKISKYWSGFVNNVFTNTANFGIQVPVDLDVKIKAVMIGACFLIDLMFFENSLDGL
SIO_010081: LOC100544347
subclass of: SO_0000673
so part of: LOC100544347
location: complement(join(2636499..2636537,2637013..2637174,2638043..2638204,2639209..2639429,2640223..2640265,2643547..2643698,2651943..2651988))
location: region:2636499-2651988:-1
so has part: feature:2651943-2651988:-1:exon
so has part: feature:2643547-2643698:-1:exon
so has part: feature:2640223-2640265:-1:exon
so has part: feature:2639209-2639429:-1:exon
so has part: feature:2638043-2638204:-1:exon
so has part: feature:2637013-2637174:-1:exon
so has part: feature:2636499-2636537:-1:exon

XP_031410926.1
type: Protein
SIO_000068: ncbiprotein

position:2636499:-1
position: 2636499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2651943-2651988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2643547-2643698:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2640223-2640265:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2639209-2639429:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2638043-2638204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2637013-2637174:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2636499-2636537:-1:exon

PLSCR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PLSCR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2657754..2666185)
location: region:2657754-2666185:-1
so has part: feature:2657754-2666185:-1:exon
subclass of: SO_0000010

100544033
type: Gene
SIO_000068: ncbigene

position:2657754:-1
position: 2657754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2666185:-1
position: 2666185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2657754-2666185:-1:exon

PLSCR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PLSCR1
product: phospholipid scramblase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 195 samples with support for all annotated introns
transcript id: XM_010716384.2
SIO_010081: PLSCR1
subclass of: SO_0000673
so part of: PLSCR1
location: complement(join(2657754..2658174,2659340..2659501,2660545..2660706,2661158..2661378,2662410..2662452,2663476..2663636,2665191..2665292,2666078..2666185))
location: region:2657754-2666185:-1
so has part: feature:2666078-2666185:-1:exon
so has part: feature:2665191-2665292:-1:exon
so has part: feature:2663476-2663636:-1:exon
so has part: feature:2662410-2662452:-1:exon
so has part: feature:2661158-2661378:-1:exon
so has part: feature:2660545-2660706:-1:exon
so has part: feature:2659340-2659501:-1:exon
so has part: feature:2657754-2658174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2666078-2666185:-1:exon

position:2666078:-1
position: 2666078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2665191-2665292:-1:exon

position:2665191:-1
position: 2665191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2665292:-1
position: 2665292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2663476-2663636:-1:exon

position:2663476:-1
position: 2663476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2663636:-1
position: 2663636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2662410-2662452:-1:exon

position:2662410:-1
position: 2662410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2662452:-1
position: 2662452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2661158-2661378:-1:exon

position:2661158:-1
position: 2661158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2661378:-1
position: 2661378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2660545-2660706:-1:exon

position:2660545:-1
position: 2660545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2660706:-1
position: 2660706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2659340-2659501:-1:exon

position:2659340:-1
position: 2659340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2659501:-1
position: 2659501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2657754-2658174:-1:exon

position:2658174:-1
position: 2658174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLSCR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PLSCR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid scramblase 1
translation: MLFCRTVTSRSIAMQANNPAPAPGFSNTGYAPGNQPPYGHPQYAAGNFYGTPAAGPYAYQAQPMGNPSGAAVPPIQNQPSGTIWMPIPPPIPNCPPGLEYLTQIDQILIHQQIELLEIFIGLESNNKYEIKNSLGQRVYFAAEDTDCCTRNCCGPARPFTIKIMDNLGHEVIRLERPLRCSSCFFPCCLQEIEIQAPPGTPVGYVVQNWHPCLPKFTIQDEKKMDVLKINGPCVICSCCEDVNFEVKSLDEVSNVGRISKQWSGFLKEAFTDADNFGVSFPMDLDVKMKAVMLGACFLIDFMFFESIGDSQQRAGVWQ
SIO_010081: PLSCR1
subclass of: SO_0000673
so part of: PLSCR1
location: complement(join(2658115..2658174,2659340..2659501,2660545..2660706,2661158..2661378,2662410..2662452,2663476..2663636,2665191..2665292,2666078..2666123))
location: region:2658115-2666123:-1
so has part: feature:2666078-2666123:-1:exon
so has part: feature:2665191-2665292:-1:exon
so has part: feature:2663476-2663636:-1:exon
so has part: feature:2662410-2662452:-1:exon
so has part: feature:2661158-2661378:-1:exon
so has part: feature:2660545-2660706:-1:exon
so has part: feature:2659340-2659501:-1:exon
so has part: feature:2658115-2658174:-1:exon

XP_010714686.1
type: Protein
SIO_000068: ncbiprotein

position:2658115:-1
position: 2658115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2666123:-1
position: 2666123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2666078-2666123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2665191-2665292:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2663476-2663636:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2662410-2662452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2661158-2661378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2660545-2660706:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2659340-2659501:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2658115-2658174:-1:exon

PLOD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PLOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2688224..2721035)
location: region:2688224-2721035:-1
so has part: feature:2688224-2721035:-1:exon
subclass of: SO_0000010

100544189
type: Gene
SIO_000068: ncbigene

position:2688224:-1
position: 2688224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2721035:-1
position: 2721035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2688224-2721035:-1:exon

PLOD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PLOD2
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 217 samples with support for all annotated introns
transcript id: XM_010716386.3
SIO_010081: PLOD2
subclass of: SO_0000673
so part of: PLOD2
location: complement(join(2688224..2689406,2690244..2690369,2690588..2690734,2691609..2691713,2692655..2692720,2693105..2693218,2695802..2695943,2697055..2697180,2698554..2698658,2703267..2703388,2705085..2705210,2708759..2708860,2710266..2710363,2711088..2711151,2712822..2712934,2714282..2714445,2719455..2719590,2720927..2721035))
location: region:2688224-2721035:-1
so has part: feature:2720927-2721035:-1:exon
so has part: feature:2719455-2719590:-1:exon
so has part: feature:2714282-2714445:-1:exon
so has part: feature:2712822-2712934:-1:exon
so has part: feature:2711088-2711151:-1:exon
so has part: feature:2710266-2710363:-1:exon
so has part: feature:2708759-2708860:-1:exon
so has part: feature:2705085-2705210:-1:exon
so has part: feature:2703267-2703388:-1:exon
so has part: feature:2698554-2698658:-1:exon
so has part: feature:2697055-2697180:-1:exon
so has part: feature:2695802-2695943:-1:exon
so has part: feature:2693105-2693218:-1:exon
so has part: feature:2692655-2692720:-1:exon
so has part: feature:2691609-2691713:-1:exon
so has part: feature:2690588-2690734:-1:exon
so has part: feature:2690244-2690369:-1:exon
so has part: feature:2688224-2689406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2720927-2721035:-1:exon

position:2720927:-1
position: 2720927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2719455-2719590:-1:exon

position:2719455:-1
position: 2719455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2719590:-1
position: 2719590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2714282-2714445:-1:exon

position:2714282:-1
position: 2714282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2714445:-1
position: 2714445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2712822-2712934:-1:exon

position:2712822:-1
position: 2712822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2712934:-1
position: 2712934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2711088-2711151:-1:exon

position:2711088:-1
position: 2711088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2711151:-1
position: 2711151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2710266-2710363:-1:exon

position:2710266:-1
position: 2710266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2710363:-1
position: 2710363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2708759-2708860:-1:exon

position:2708759:-1
position: 2708759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2708860:-1
position: 2708860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2705085-2705210:-1:exon

position:2705085:-1
position: 2705085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2705210:-1
position: 2705210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2703267-2703388:-1:exon

position:2703267:-1
position: 2703267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2703388:-1
position: 2703388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2698554-2698658:-1:exon

position:2698554:-1
position: 2698554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2698658:-1
position: 2698658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2697055-2697180:-1:exon

position:2697055:-1
position: 2697055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697180:-1
position: 2697180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2695802-2695943:-1:exon

position:2695802:-1
position: 2695802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2695943:-1
position: 2695943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2693105-2693218:-1:exon

position:2693105:-1
position: 2693105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2693218:-1
position: 2693218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2692655-2692720:-1:exon

position:2692655:-1
position: 2692655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2692720:-1
position: 2692720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2691609-2691713:-1:exon

position:2691609:-1
position: 2691609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2691713:-1
position: 2691713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2690588-2690734:-1:exon

position:2690588:-1
position: 2690588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690734:-1
position: 2690734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2690244-2690369:-1:exon

position:2690244:-1
position: 2690244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2690369:-1
position: 2690369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2688224-2689406:-1:exon

position:2689406:-1
position: 2689406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLOD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PLOD2
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 217 samples with support for all annotated introns
transcript id: XM_010716385.3
SIO_010081: PLOD2
subclass of: SO_0000673
so part of: PLOD2
location: complement(join(2688224..2689406,2690244..2690369,2690588..2690734,2691609..2691713,2692655..2692720,2693105..2693218,2694553..2694615,2695802..2695943,2697055..2697180,2698554..2698658,2703267..2703388,2705085..2705210,2708759..2708860,2710266..2710363,2711088..2711151,2712822..2712934,2714282..2714445,2719455..2719590,2720927..2721035))
location: region:2688224-2721035:-1
so has part: feature:2720927-2721035:-1:exon
so has part: feature:2719455-2719590:-1:exon
so has part: feature:2714282-2714445:-1:exon
so has part: feature:2712822-2712934:-1:exon
so has part: feature:2711088-2711151:-1:exon
so has part: feature:2710266-2710363:-1:exon
so has part: feature:2708759-2708860:-1:exon
so has part: feature:2705085-2705210:-1:exon
so has part: feature:2703267-2703388:-1:exon
so has part: feature:2698554-2698658:-1:exon
so has part: feature:2697055-2697180:-1:exon
so has part: feature:2695802-2695943:-1:exon
so has part: feature:2694553-2694615:-1:exon
so has part: feature:2693105-2693218:-1:exon
so has part: feature:2692655-2692720:-1:exon
so has part: feature:2691609-2691713:-1:exon
so has part: feature:2690588-2690734:-1:exon
so has part: feature:2690244-2690369:-1:exon
so has part: feature:2688224-2689406:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2720927-2721035:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2719455-2719590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2714282-2714445:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2712822-2712934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2711088-2711151:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2710266-2710363:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2708759-2708860:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2705085-2705210:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2703267-2703388:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2698554-2698658:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2697055-2697180:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2695802-2695943:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2694553-2694615:-1:exon

position:2694553:-1
position: 2694553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2694615:-1
position: 2694615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2693105-2693218:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2692655-2692720:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2691609-2691713:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2690588-2690734:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2690244-2690369:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2688224-2689406:-1:exon

PLOD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PLOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X2
translation: MFVECYDVIFAGGPEELLKKFQETNHKVVFAADGLIWPDKRLADKYPAVRSGKRFLNSGGFIGYAPYINRIVQQWDLQDNDDDQLFYTKIYVDPLARESLNITLDHKCAIFQTLNGAVDEVHLNFEEGKVRARNSAYETLPITVLGNGPTKIYLNYLGNYIPNAWTRETGCSICDLDMLDLSTVTEYPSVKIGVFIEQPTPFLPKFLDRLLTLDYPKEALSVFIHNNEVYHEKHIKKFWEKAKNIIRNIKIVGPEENLSQAEARNMGMDLCRQDEACEYYFSIDADVVLTNPKTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYIDIVQGNRVGVWNIPYMANIYLIKGQTLRSEMKEKNYFMRDKLDPDMALCRNAREMGVFMYITNRHEFGRLISTANYNTSHYNNDLWQIFENPVDWKETYINPNYSKIFTDNIVEQPCPDVFWFPIFSDTACDELVEEMEHFGQWSGGKHQDSRISGGYENVPTDDIHMKQIGLDNEWLHFIREFIAPVTLKVFAGYYTKGYALLNFVVKYSPDRQRSLRPHHDSSTFTINIALNKVGEDFQGGGCKFLRYNCSIESPRKGWSFMHPGRLTHLHEGLPILNGTRYIAVSFIDP
SIO_010081: PLOD2
subclass of: SO_0000673
so part of: PLOD2
location: complement(join(2689251..2689406,2690244..2690369,2690588..2690734,2691609..2691713,2692655..2692720,2693105..2693218,2695802..2695943,2697055..2697180,2698554..2698658,2703267..2703388,2705085..2705210,2708759..2708860,2710266..2710363,2711088..2711151,2712822..2712934,2714282..2714445,2719455..2719468))
location: region:2689251-2719468:-1
so has part: feature:2719455-2719468:-1:exon
so has part: feature:2714282-2714445:-1:exon
so has part: feature:2712822-2712934:-1:exon
so has part: feature:2711088-2711151:-1:exon
so has part: feature:2710266-2710363:-1:exon
so has part: feature:2708759-2708860:-1:exon
so has part: feature:2705085-2705210:-1:exon
so has part: feature:2703267-2703388:-1:exon
so has part: feature:2698554-2698658:-1:exon
so has part: feature:2697055-2697180:-1:exon
so has part: feature:2695802-2695943:-1:exon
so has part: feature:2693105-2693218:-1:exon
so has part: feature:2692655-2692720:-1:exon
so has part: feature:2691609-2691713:-1:exon
so has part: feature:2690588-2690734:-1:exon
so has part: feature:2690244-2690369:-1:exon
so has part: feature:2689251-2689406:-1:exon

XP_010714688.1
type: Protein
SIO_000068: ncbiprotein

position:2689251:-1
position: 2689251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2719468:-1
position: 2719468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2719455-2719468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2714282-2714445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2712822-2712934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2711088-2711151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2710266-2710363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2708759-2708860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2705085-2705210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2703267-2703388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2698554-2698658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2697055-2697180:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2695802-2695943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2693105-2693218:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2692655-2692720:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2691609-2691713:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2690588-2690734:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2690244-2690369:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2689251-2689406:-1:exon

PLOD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PLOD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X1
translation: MFVECYDVIFAGGPEELLKKFQETNHKVVFAADGLIWPDKRLADKYPAVRSGKRFLNSGGFIGYAPYINRIVQQWDLQDNDDDQLFYTKIYVDPLARESLNITLDHKCAIFQTLNGAVDEVHLNFEEGKVRARNSAYETLPITVLGNGPTKIYLNYLGNYIPNAWTRETGCSICDLDMLDLSTVTEYPSVKIGVFIEQPTPFLPKFLDRLLTLDYPKEALSVFIHNNEVYHEKHIKKFWEKAKNIIRNIKIVGPEENLSQAEARNMGMDLCRQDEACEYYFSIDADVVLTNPKTLKILIEQNRKIIAPLVTRHGKLWSNFWGALSPDGYYARSEDYIDIVQGNRVGVWNIPYMANIYLIKGQTLRSEMKEKNYFMRDKLDPDMALCRNAREMTLQREKDSPSSETFHMLRPPKGVFMYITNRHEFGRLISTANYNTSHYNNDLWQIFENPVDWKETYINPNYSKIFTDNIVEQPCPDVFWFPIFSDTACDELVEEMEHFGQWSGGKHQDSRISGGYENVPTDDIHMKQIGLDNEWLHFIREFIAPVTLKVFAGYYTKGYALLNFVVKYSPDRQRSLRPHHDSSTFTINIALNKVGEDFQGGGCKFLRYNCSIESPRKGWSFMHPGRLTHLHEGLPILNGTRYIAVSFIDP
SIO_010081: PLOD2
subclass of: SO_0000673
so part of: PLOD2
location: complement(join(2689251..2689406,2690244..2690369,2690588..2690734,2691609..2691713,2692655..2692720,2693105..2693218,2694553..2694615,2695802..2695943,2697055..2697180,2698554..2698658,2703267..2703388,2705085..2705210,2708759..2708860,2710266..2710363,2711088..2711151,2712822..2712934,2714282..2714445,2719455..2719468))
location: region:2689251-2719468:-1
so has part: feature:2719455-2719468:-1:exon
so has part: feature:2714282-2714445:-1:exon
so has part: feature:2712822-2712934:-1:exon
so has part: feature:2711088-2711151:-1:exon
so has part: feature:2710266-2710363:-1:exon
so has part: feature:2708759-2708860:-1:exon
so has part: feature:2705085-2705210:-1:exon
so has part: feature:2703267-2703388:-1:exon
so has part: feature:2698554-2698658:-1:exon
so has part: feature:2697055-2697180:-1:exon
so has part: feature:2695802-2695943:-1:exon
so has part: feature:2694553-2694615:-1:exon
so has part: feature:2693105-2693218:-1:exon
so has part: feature:2692655-2692720:-1:exon
so has part: feature:2691609-2691713:-1:exon
so has part: feature:2690588-2690734:-1:exon
so has part: feature:2690244-2690369:-1:exon
so has part: feature:2689251-2689406:-1:exon

XP_010714687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2719455-2719468:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2714282-2714445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2712822-2712934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2711088-2711151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2710266-2710363:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2708759-2708860:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2705085-2705210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2703267-2703388:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2698554-2698658:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2697055-2697180:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2695802-2695943:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2694553-2694615:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2693105-2693218:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2692655-2692720:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2691609-2691713:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2690588-2690734:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2690244-2690369:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2689251-2689406:-1:exon

LOC104912541
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912541
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2755129..2765257
location: region:2755129-2765257:1
so has part: feature:2755129-2765257:1:exon
subclass of: SO_0000011

104912541
type: Gene
SIO_000068: ncbigene

position:2755129:1
position: 2755129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2765257:1
position: 2765257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2755129-2765257:1:exon

LOC104912541
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912541
product: uncharacterized LOC104912541
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_794725.3
SIO_010081: LOC104912541
subclass of: SO_0000673
so part of: LOC104912541
location: join(2755129..2755243,2757821..2757896,2760152..2760216,2764031..2765257)
location: region:2755129-2765257:1
so has part: feature:2755129-2755243:1:exon
so has part: feature:2757821-2757896:1:exon
so has part: feature:2760152-2760216:1:exon
so has part: feature:2764031-2765257:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2755129-2755243:1:exon

position:2755243:1
position: 2755243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2757821-2757896:1:exon

position:2757821:1
position: 2757821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2757896:1
position: 2757896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2760152-2760216:1:exon

position:2760152:1
position: 2760152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2760216:1
position: 2760216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2764031-2765257:1:exon

position:2764031:1
position: 2764031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217044
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217044
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2768797..2807054
location: region:2768797-2807054:1
so has part: feature:2768797-2807054:1:exon
subclass of: SO_0000011

116217044
type: Gene
SIO_000068: ncbigene

position:2768797:1
position: 2768797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2807054:1
position: 2807054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2768797-2807054:1:exon

LOC116217044
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217044
product: uncharacterized LOC116217044
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004160921.1
SIO_010081: LOC116217044
subclass of: SO_0000673
so part of: LOC116217044
location: join(2768797..2775578,2795536..2795584,2806856..2807054)
location: region:2768797-2807054:1
so has part: feature:2768797-2775578:1:exon
so has part: feature:2795536-2795584:1:exon
so has part: feature:2806856-2807054:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2768797-2775578:1:exon

position:2775578:1
position: 2775578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2795536-2795584:1:exon

position:2795536:1
position: 2795536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2795584:1
position: 2795584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2806856-2807054:1:exon

position:2806856:1
position: 2806856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217045
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217045
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2841133..2856782
location: region:2841133-2856782:1
so has part: feature:2841133-2856782:1:exon
subclass of: SO_0000011

116217045
type: Gene
SIO_000068: ncbigene

position:2841133:1
position: 2841133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856782:1
position: 2856782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2841133-2856782:1:exon

LOC116217045
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217045
product: uncharacterized LOC116217045
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004160922.1
SIO_010081: LOC116217045
subclass of: SO_0000673
so part of: LOC116217045
location: join(2841133..2841289,2842342..2842497,2856254..2856782)
location: region:2841133-2856782:1
so has part: feature:2841133-2841289:1:exon
so has part: feature:2842342-2842497:1:exon
so has part: feature:2856254-2856782:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2841133-2841289:1:exon

position:2841289:1
position: 2841289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2842342-2842497:1:exon

position:2842342:1
position: 2842342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2842497:1
position: 2842497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2856254-2856782:1:exon

position:2856254:1
position: 2856254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DIPK2A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DIPK2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3278618..3289706
location: region:3278618-3289706:1
so has part: feature:3278618-3289706:1:exon
subclass of: SO_0000010

100543725
type: Gene
SIO_000068: ncbigene

position:3278618:1
position: 3278618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3289706:1
position: 3289706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3278618-3289706:1:exon

DIPK2A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DIPK2A
product: divergent protein kinase domain 2A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_010716387.2
SIO_010081: DIPK2A
subclass of: SO_0000673
so part of: DIPK2A
location: join(3278618..3278622,3285547..3285848,3286762..3289706)
location: region:3278618-3289706:1
so has part: feature:3278618-3278622:1:exon
so has part: feature:3285547-3285848:1:exon
so has part: feature:3286762-3289706:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3278618-3278622:1:exon

position:3278622:1
position: 3278622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3285547-3285848:1:exon

position:3285547:1
position: 3285547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3285848:1
position: 3285848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3286762-3289706:1:exon

position:3286762:1
position: 3286762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DIPK2A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DIPK2A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: divergent protein kinase domain 2A
translation: MVAVNYVGEELWSYFNAPWEKRVDLAWQLMEIAEQLTNNDFEFALYLLDVSFDNFAVGPRDGKVIIVDAENVLVADKRLIRQNKPENWDVWYESKFDDCDKEACLSFSKEILCTRVTVDHNYYAICQNLLSRHATWRGTSGGLLHDPPADIAKDGRLEALLDECANPKKRYGRFQAAKELREYLAQLSNNVR
SIO_010081: DIPK2A
subclass of: SO_0000673
so part of: DIPK2A
location: join(3285602..3285848,3286762..3287093)
location: region:3285602-3287093:1
so has part: feature:3285602-3285848:1:exon
so has part: feature:3286762-3287093:1:exon

XP_010714689.1
type: Protein
SIO_000068: ncbiprotein

position:3285602:1
position: 3285602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3287093:1
position: 3287093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3285602-3285848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3286762-3287093:1:exon

LOC100543880
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100543880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3309937..3321093)
location: region:3309937-3321093:-1
so has part: feature:3309937-3321093:-1:exon
subclass of: SO_0000010

100543880
type: Gene
SIO_000068: ncbigene

position:3309937:-1
position: 3309937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3321093:-1
position: 3321093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3309937-3321093:-1:exon

LOC100543880
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543880
product: sodium/hydrogen exchanger 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_003209097.3
SIO_010081: LOC100543880
subclass of: SO_0000673
so part of: LOC100543880
location: complement(join(3309937..3310071,3314865..3315067,3320745..3321093))
location: region:3309937-3321093:-1
so has part: feature:3320745-3321093:-1:exon
so has part: feature:3314865-3315067:-1:exon
so has part: feature:3309937-3310071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3320745-3321093:-1:exon

position:3320745:-1
position: 3320745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3314865-3315067:-1:exon

position:3314865:-1
position: 3314865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3315067:-1
position: 3315067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3309937-3310071:-1:exon

position:3310071:-1
position: 3310071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100543880
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543880
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 9-like
translation: MEKLKKYALLKDEDQFYHEGAVELLVFNFLLILTILTIWLFKNHRFRFLHETGGAMVYGLVMGLIIRYATKTSDVENGTVYECEKLKSGPSSLLINITNQVYEYQYKREINNHNVNGHQGNAMLQKMTFDPSIFFNILLPPIIFHAGYSLKKVSASVLNYRNGLV
SIO_010081: LOC100543880
subclass of: SO_0000673
so part of: LOC100543880
location: complement(join(3309952..3310071,3314865..3315067,3320745..3320919))
location: region:3309952-3320919:-1
so has part: feature:3320745-3320919:-1:exon
so has part: feature:3314865-3315067:-1:exon
so has part: feature:3309952-3310071:-1:exon

XP_003209145.2
type: Protein
SIO_000068: ncbiprotein

position:3309952:-1
position: 3309952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3320919:-1
position: 3320919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3320745-3320919:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3314865-3315067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3309952-3310071:-1:exon

LOC100543417
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100543417
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3354540..3394584)
location: region:3354540-3394584:-1
so has part: feature:3354540-3394584:-1:exon
subclass of: SO_0000010

100543417
type: Gene
SIO_000068: ncbigene

position:3354540:-1
position: 3354540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3394584:-1
position: 3394584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3354540-3394584:-1:exon

LOC100543417
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543417
product: sodium/hydrogen exchanger 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_031555096.1
SIO_010081: LOC100543417
subclass of: SO_0000673
so part of: LOC100543417
location: complement(join(3354540..3354727,3362765..3362870,3363677..3363815,3386706..3386811,3394452..3394584))
location: region:3354540-3394584:-1
so has part: feature:3394452-3394584:-1:exon
so has part: feature:3386706-3386811:-1:exon
so has part: feature:3363677-3363815:-1:exon
so has part: feature:3362765-3362870:-1:exon
so has part: feature:3354540-3354727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3394452-3394584:-1:exon

position:3394452:-1
position: 3394452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3386706-3386811:-1:exon

position:3386706:-1
position: 3386706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3386811:-1
position: 3386811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3363677-3363815:-1:exon

position:3363677:-1
position: 3363677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3363815:-1
position: 3363815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3362765-3362870:-1:exon

position:3362765:-1
position: 3362765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3362870:-1
position: 3362870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3354540-3354727:-1:exon

position:3354727:-1
position: 3354727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100543417
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543417
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 9
translation: MYGFVKAMVHIGQLKGWEFHFTDCLFFGSLMSATDPVTVLAIFSELHVDTDLYTLLFGESVLNDAVAIVLTYSISIYSPKENPNAFDAAAFFQSVGNFLGIFAGSFAMGSSYAVVTALLTKFTKLCEFPMLETGLFFLLSWSAFLSAEAAGLTGIVAVLFCGVTQAHYTYNNLSSDSKMRTKQVGYGNNTVSSTCTRNRQNLKYSWMEFC
SIO_010081: LOC100543417
subclass of: SO_0000673
so part of: LOC100543417
location: complement(join(3354555..3354727,3362765..3362870,3363677..3363815,3386706..3386811,3394452..3394560))
location: region:3354555-3394560:-1
so has part: feature:3394452-3394560:-1:exon
so has part: feature:3386706-3386811:-1:exon
so has part: feature:3363677-3363815:-1:exon
so has part: feature:3362765-3362870:-1:exon
so has part: feature:3354555-3354727:-1:exon

XP_031410956.1
type: Protein
SIO_000068: ncbiprotein

position:3354555:-1
position: 3354555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3394560:-1
position: 3394560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3394452-3394560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3386706-3386811:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363677-3363815:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362765-3362870:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3354555-3354727:-1:exon

LOC104912542
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3429070..3478615)
location: region:3429070-3478615:-1
so has part: feature:3429070-3478615:-1:exon
subclass of: SO_0000010

104912542
type: Gene
SIO_000068: ncbigene

position:3429070:-1
position: 3429070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3478615:-1
position: 3478615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3429070-3478615:-1:exon

LOC104912542
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912542
product: sodium/hydrogen exchanger 9-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_031555097.1
SIO_010081: LOC104912542
subclass of: SO_0000673
so part of: LOC104912542
location: complement(join(3429070..3429894,3450495..3450574,3453833..3453881,3478435..3478615))
location: region:3429070-3478615:-1
so has part: feature:3478435-3478615:-1:exon
so has part: feature:3453833-3453881:-1:exon
so has part: feature:3450495-3450574:-1:exon
so has part: feature:3429070-3429894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3478435-3478615:-1:exon

position:3478435:-1
position: 3478435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3453833-3453881:-1:exon

position:3453833:-1
position: 3453833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3453881:-1
position: 3453881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3450495-3450574:-1:exon

position:3450495:-1
position: 3450495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3450574:-1
position: 3450574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3429070-3429894:-1:exon

position:3429894:-1
position: 3429894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912542
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912542
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 9-like
translation: MMFTTALLIVFFTVWVFGGGTTPMLTWLQIRVGVDPDEDMKAEAANQTACNLDKNTTKAESAWLFRVWYVFDHRKPDGFTRIPTEMNANSICLFHNVHTCKNYNLLQIQTTF
SIO_010081: LOC104912542
subclass of: SO_0000673
so part of: LOC104912542
location: complement(join(3429777..3429894,3450495..3450574,3453833..3453881,3478435..3478526))
location: region:3429777-3478526:-1
so has part: feature:3478435-3478526:-1:exon
so has part: feature:3453833-3453881:-1:exon
so has part: feature:3450495-3450574:-1:exon
so has part: feature:3429777-3429894:-1:exon

XP_031410957.1
type: Protein
SIO_000068: ncbiprotein

position:3429777:-1
position: 3429777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3478526:-1
position: 3478526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3478435-3478526:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3453833-3453881:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3450495-3450574:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3429777-3429894:-1:exon

LOC109369420
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369420
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3488226..3494513)
location: region:3488226-3494513:-1
so has part: feature:3488226-3494513:-1:exon
subclass of: SO_0000011

109369420
type: Gene
SIO_000068: ncbigene

position:3488226:-1
position: 3488226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3494513:-1
position: 3494513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3488226-3494513:-1:exon

LOC109369420
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369420
product: uncharacterized LOC109369420
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 176 samples with support for all annotated introns
transcript id: XR_002118428.2
SIO_010081: LOC109369420
subclass of: SO_0000673
so part of: LOC109369420
location: complement(join(3488226..3492401,3492924..3494513))
location: region:3488226-3494513:-1
so has part: feature:3492924-3494513:-1:exon
so has part: feature:3488226-3492401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3492924-3494513:-1:exon

position:3492924:-1
position: 3492924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3488226-3492401:-1:exon

position:3492401:-1
position: 3492401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHST2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CHST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <3496880..3499282
location: region:3496880-3499282:1
so has part: feature:3496880-3499282:1:exon
subclass of: SO_0000010

100543258
type: Gene
SIO_000068: ncbigene

position:3496880:1
position: 3496880
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3499282:1
position: 3499282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3496880-3499282:1:exon

CHST2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CHST2
product: carbohydrate sulfotransferase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010716643.3
SIO_010081: CHST2
subclass of: SO_0000673
so part of: CHST2
location: <3496880..3499282
location: region:3496880-3499282:1
so has part: feature:3496880-3499282:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3496880-3499282:1:exon

CHST2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CHST2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carbohydrate sulfotransferase 2
translation: GRRQLVYVFTTWRSGSSFFGELFNQNPEVFFLYEPVWHVWQKLYPGDAVSLQGAARDMLSSLYRCDLSVFQLYSTAGAGKNLTTLGIFGAATNKVICSSPLCPAYRKEVVGMVDDRVCKKCPPQRLSRFQEECHKYRTLVIKGVRVFDLTVLAPLMRDPTLDLKVIHLVRDPRAVASSRIKSRHGLIRESLQVVRSRDPRIHRMPFLDAGHKLGGKKDGGGGSDYHALGAMEVICSSMAKTLQTALHPPDWLRGNYMAVRYEDLVMEPIKTLRQVYGFVNLAVSPEMEKFTLNMTSGPGYSSKPFVVSARNATQALSAWRTALSFQQIKQVEEYCQQPMALLGYERVGSPEEVKDLGRTLLRKPRL
SIO_010081: CHST2
subclass of: SO_0000673
so part of: CHST2
location: <3496880..3497980
location: region:3496880-3497980:1
so has part: feature:3496880-3497980:1:exon

XP_010714945.1
type: Protein
SIO_000068: ncbiprotein

position:3497980:1
position: 3497980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3496880-3497980:1:exon

LOC109369421
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3503725..3514440
location: region:3503725-3514440:1
so has part: feature:3503725-3514440:1:exon
subclass of: SO_0000011

109369421
type: Gene
SIO_000068: ncbigene

position:3503725:1
position: 3503725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3514440:1
position: 3514440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3503725-3514440:1:exon

LOC109369421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369421
product: uncharacterized LOC109369421
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002118429.1
SIO_010081: LOC109369421
subclass of: SO_0000673
so part of: LOC109369421
location: join(3503725..3505754,3506291..3506323,3510196..3514440)
location: region:3503725-3514440:1
so has part: feature:3503725-3505754:1:exon
so has part: feature:3506291-3506323:1:exon
so has part: feature:3510196-3514440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3503725-3505754:1:exon

position:3505754:1
position: 3505754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3506291-3506323:1:exon

position:3506291:1
position: 3506291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3506323:1
position: 3506323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3510196-3514440:1:exon

position:3510196:1
position: 3510196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116217046
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217046
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3540557..3545179)
location: region:3540557-3545179:-1
so has part: feature:3540557-3545179:-1:exon
subclass of: SO_0000011

116217046
type: Gene
SIO_000068: ncbigene

position:3540557:-1
position: 3540557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3545179:-1
position: 3545179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3540557-3545179:-1:exon

LOC116217046
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217046
product: uncharacterized LOC116217046, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_004160924.1
SIO_010081: LOC116217046
subclass of: SO_0000673
so part of: LOC116217046
location: complement(join(3540557..3543360,3543542..3543623,3543998..3544082,3544977..3545179))
location: region:3540557-3545179:-1
so has part: feature:3544977-3545179:-1:exon
so has part: feature:3543998-3544082:-1:exon
so has part: feature:3543542-3543623:-1:exon
so has part: feature:3540557-3543360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3544977-3545179:-1:exon

position:3544977:-1
position: 3544977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3543998-3544082:-1:exon

position:3543998:-1
position: 3543998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3544082:-1
position: 3544082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3543542-3543623:-1:exon

position:3543542:-1
position: 3543542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3543623:-1
position: 3543623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3540557-3543360:-1:exon

position:3543360:-1
position: 3543360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217046
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217046
product: uncharacterized LOC116217046, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_004160923.1
SIO_010081: LOC116217046
subclass of: SO_0000673
so part of: LOC116217046
location: complement(join(3540557..3543360,3543542..3543623,3543998..3545179))
location: region:3540557-3545179:-1
so has part: feature:3543998-3545179:-1:exon
so has part: feature:3543542-3543623:-1:exon
so has part: feature:3540557-3543360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3543998-3545179:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3543542-3543623:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3540557-3543360:-1:exon

U2SURP
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: U2SURP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3547853..3583069
location: region:3547853-3583069:1
so has part: feature:3547853-3583069:1:exon
subclass of: SO_0000010

100543105
type: Gene
SIO_000068: ncbigene

position:3547853:1
position: 3547853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3583069:1
position: 3583069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3547853-3583069:1:exon

U2SURP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: U2SURP
product: U2 snRNP associated SURP domain containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 179 samples with support for all annotated introns
transcript id: XM_010716390.3
SIO_010081: U2SURP
subclass of: SO_0000673
so part of: U2SURP
location: join(3547853..3548110,3550454..3550552,3551613..3551727,3552062..3552195,3554230..3554297,3555584..3555678,3555758..3555790,3555885..3555967,3556416..3556581,3557423..3557634,3558588..3558631,3561870..3561974,3562948..3563014,3563112..3563275,3564317..3564479,3565053..3565132,3566171..3566258,3567260..3567382,3569033..3569189,3569542..3569637,3570199..3570265,3571432..3571594,3578174..3578284,3580629..3580747,3581411..3581587,3582857..3582995)
location: region:3547853-3582995:1
so has part: feature:3547853-3548110:1:exon
so has part: feature:3550454-3550552:1:exon
so has part: feature:3551613-3551727:1:exon
so has part: feature:3552062-3552195:1:exon
so has part: feature:3554230-3554297:1:exon
so has part: feature:3555584-3555678:1:exon
so has part: feature:3555758-3555790:1:exon
so has part: feature:3555885-3555967:1:exon
so has part: feature:3556416-3556581:1:exon
so has part: feature:3557423-3557634:1:exon
so has part: feature:3558588-3558631:1:exon
so has part: feature:3561870-3561974:1:exon
so has part: feature:3562948-3563014:1:exon
so has part: feature:3563112-3563275:1:exon
so has part: feature:3564317-3564479:1:exon
so has part: feature:3565053-3565132:1:exon
so has part: feature:3566171-3566258:1:exon
so has part: feature:3567260-3567382:1:exon
so has part: feature:3569033-3569189:1:exon
so has part: feature:3569542-3569637:1:exon
so has part: feature:3570199-3570265:1:exon
so has part: feature:3571432-3571594:1:exon
so has part: feature:3578174-3578284:1:exon
so has part: feature:3580629-3580747:1:exon
so has part: feature:3581411-3581587:1:exon
so has part: feature:3582857-3582995:1:exon

position:3582995:1
position: 3582995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3547853-3548110:1:exon

position:3548110:1
position: 3548110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3550454-3550552:1:exon

position:3550454:1
position: 3550454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3550552:1
position: 3550552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3551613-3551727:1:exon

position:3551613:1
position: 3551613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3551727:1
position: 3551727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3552062-3552195:1:exon

position:3552062:1
position: 3552062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3552195:1
position: 3552195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3554230-3554297:1:exon

position:3554230:1
position: 3554230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3554297:1
position: 3554297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3555584-3555678:1:exon

position:3555584:1
position: 3555584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3555678:1
position: 3555678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3555758-3555790:1:exon

position:3555758:1
position: 3555758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3555790:1
position: 3555790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3555885-3555967:1:exon

position:3555885:1
position: 3555885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3555967:1
position: 3555967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3556416-3556581:1:exon

position:3556416:1
position: 3556416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3556581:1
position: 3556581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3557423-3557634:1:exon

position:3557423:1
position: 3557423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3557634:1
position: 3557634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3558588-3558631:1:exon

position:3558588:1
position: 3558588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3558631:1
position: 3558631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3561870-3561974:1:exon

position:3561870:1
position: 3561870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3561974:1
position: 3561974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3562948-3563014:1:exon

position:3562948:1
position: 3562948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3563014:1
position: 3563014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3563112-3563275:1:exon

position:3563112:1
position: 3563112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3563275:1
position: 3563275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3564317-3564479:1:exon

position:3564317:1
position: 3564317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3564479:1
position: 3564479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3565053-3565132:1:exon

position:3565053:1
position: 3565053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3565132:1
position: 3565132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3566171-3566258:1:exon

position:3566171:1
position: 3566171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3566258:1
position: 3566258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3567260-3567382:1:exon

position:3567260:1
position: 3567260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3567382:1
position: 3567382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3569033-3569189:1:exon

position:3569033:1
position: 3569033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3569189:1
position: 3569189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3569542-3569637:1:exon

position:3569542:1
position: 3569542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3569637:1
position: 3569637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3570199-3570265:1:exon

position:3570199:1
position: 3570199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3570265:1
position: 3570265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3571432-3571594:1:exon

position:3571432:1
position: 3571432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3571594:1
position: 3571594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3578174-3578284:1:exon

position:3578174:1
position: 3578174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3578284:1
position: 3578284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3580629-3580747:1:exon

position:3580629:1
position: 3580629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3580747:1
position: 3580747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:3581411-3581587:1:exon

position:3581411:1
position: 3581411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3581587:1
position: 3581587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:3582857-3582995:1:exon

position:3582857:1
position: 3582857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

U2SURP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: U2SURP
product: U2 snRNP associated SURP domain containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 221 samples with support for all annotated introns
transcript id: XM_010716389.3
SIO_010081: U2SURP
subclass of: SO_0000673
so part of: U2SURP
location: join(3547854..3548110,3550454..3550552,3551613..3551727,3552062..3552195,3554230..3554297,3555584..3555678,3555758..3555793,3555885..3555967,3556416..3556581,3557423..3557634,3558588..3558631,3561870..3561974,3562948..3563014,3563112..3563275,3564317..3564479,3565053..3565132,3566171..3566258,3567260..3567382,3569033..3569189,3569542..3569637,3570199..3570265,3571432..3571594,3578174..3578284,3580629..3580747,3581411..3581587,3582857..3583069)
location: region:3547854-3583069:1
so has part: feature:3547854-3548110:1:exon
so has part: feature:3550454-3550552:1:exon
so has part: feature:3551613-3551727:1:exon
so has part: feature:3552062-3552195:1:exon
so has part: feature:3554230-3554297:1:exon
so has part: feature:3555584-3555678:1:exon
so has part: feature:3555758-3555793:1:exon
so has part: feature:3555885-3555967:1:exon
so has part: feature:3556416-3556581:1:exon
so has part: feature:3557423-3557634:1:exon
so has part: feature:3558588-3558631:1:exon
so has part: feature:3561870-3561974:1:exon
so has part: feature:3562948-3563014:1:exon
so has part: feature:3563112-3563275:1:exon
so has part: feature:3564317-3564479:1:exon
so has part: feature:3565053-3565132:1:exon
so has part: feature:3566171-3566258:1:exon
so has part: feature:3567260-3567382:1:exon
so has part: feature:3569033-3569189:1:exon
so has part: feature:3569542-3569637:1:exon
so has part: feature:3570199-3570265:1:exon
so has part: feature:3571432-3571594:1:exon
so has part: feature:3578174-3578284:1:exon
so has part: feature:3580629-3580747:1:exon
so has part: feature:3581411-3581587:1:exon
so has part: feature:3582857-3583069:1:exon

position:3547854:1
position: 3547854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3547854-3548110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3550454-3550552:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3551613-3551727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3552062-3552195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554230-3554297:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3555584-3555678:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3555758-3555793:1:exon

position:3555793:1
position: 3555793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3555885-3555967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3556416-3556581:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3557423-3557634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3558588-3558631:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3561870-3561974:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3562948-3563014:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3563112-3563275:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3564317-3564479:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3565053-3565132:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3566171-3566258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3567260-3567382:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3569033-3569189:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3569542-3569637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3570199-3570265:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3571432-3571594:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3578174-3578284:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3580629-3580747:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3581411-3581587:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3582857-3583069:1:exon

U2SURP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: U2SURP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein isoform X1
translation: MSLKYFVHVVLLEYVDFEPGITCRELNQKEAVCLPGFLFPCLTSSSFSLQVRAPDAVHNTGSADTHPLMESKLKAFSIGKMSAAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGIVNASKEEHETDEKRGKIYKPSSRFSDQKNQPSQPSNEKPPSLLMIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIMEDKETEEVPDDLDGAPIEEELDGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLDGVPLDTAEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEEIPNQEEESEDEEDTQSSKSEEQHMYSNPIKEEMPESKSSVKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKSDSRSKDKKEKEECTPTRKERKRRHSASPSPSRSSGSRRAKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKGKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
SIO_010081: U2SURP
subclass of: SO_0000673
so part of: U2SURP
location: join(3547913..3548110,3550454..3550552,3551613..3551727,3552062..3552195,3554230..3554297,3555584..3555678,3555758..3555793,3555885..3555967,3556416..3556581,3557423..3557634,3558588..3558631,3561870..3561974,3562948..3563014,3563112..3563275,3564317..3564479,3565053..3565132,3566171..3566258,3567260..3567382,3569033..3569189,3569542..3569637,3570199..3570265,3571432..3571594,3578174..3578284,3580629..3580747,3581411..3581587,3582857..3582995)
location: region:3547913-3582995:1
so has part: feature:3547913-3548110:1:exon
so has part: feature:3550454-3550552:1:exon
so has part: feature:3551613-3551727:1:exon
so has part: feature:3552062-3552195:1:exon
so has part: feature:3554230-3554297:1:exon
so has part: feature:3555584-3555678:1:exon
so has part: feature:3555758-3555793:1:exon
so has part: feature:3555885-3555967:1:exon
so has part: feature:3556416-3556581:1:exon
so has part: feature:3557423-3557634:1:exon
so has part: feature:3558588-3558631:1:exon
so has part: feature:3561870-3561974:1:exon
so has part: feature:3562948-3563014:1:exon
so has part: feature:3563112-3563275:1:exon
so has part: feature:3564317-3564479:1:exon
so has part: feature:3565053-3565132:1:exon
so has part: feature:3566171-3566258:1:exon
so has part: feature:3567260-3567382:1:exon
so has part: feature:3569033-3569189:1:exon
so has part: feature:3569542-3569637:1:exon
so has part: feature:3570199-3570265:1:exon
so has part: feature:3571432-3571594:1:exon
so has part: feature:3578174-3578284:1:exon
so has part: feature:3580629-3580747:1:exon
so has part: feature:3581411-3581587:1:exon
so has part: feature:3582857-3582995:1:exon

XP_010714691.1
type: Protein
SIO_000068: ncbiprotein

position:3547913:1
position: 3547913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3547913-3548110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3550454-3550552:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3551613-3551727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3552062-3552195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554230-3554297:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3555584-3555678:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3555758-3555793:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3555885-3555967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3556416-3556581:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3557423-3557634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3558588-3558631:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3561870-3561974:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3562948-3563014:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3563112-3563275:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3564317-3564479:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3565053-3565132:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3566171-3566258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3567260-3567382:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3569033-3569189:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3569542-3569637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3570199-3570265:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3571432-3571594:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3578174-3578284:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3580629-3580747:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3581411-3581587:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3582857-3582995:1:exon

U2SURP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: U2SURP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein isoform X2
translation: MSLKYFVHVVLLEYVDFEPGITCRELNQKEAVCLPGFLFPCLTSSSFSLQVRAPDAVHNTGSADTHPLMESKLKAFSIGKMSAAKRTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVRGGIVNASKEEHETDEKRGKIYKPSSRFSDQKNQPSQPSNEKPPSLLMIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIMEDKETEEVPDDLDGAPIEEELDGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLDGVPLDTAEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEEIPNQEEESEDEEDTQSSKSEEQHMYSNPIKEEMPESKSSVKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKSDSRSKDKKEKEECTPTRKERKRRHSASPSPSRSSGSRRAKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKGKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
SIO_010081: U2SURP
subclass of: SO_0000673
so part of: U2SURP
location: join(3547913..3548110,3550454..3550552,3551613..3551727,3552062..3552195,3554230..3554297,3555584..3555678,3555758..3555790,3555885..3555967,3556416..3556581,3557423..3557634,3558588..3558631,3561870..3561974,3562948..3563014,3563112..3563275,3564317..3564479,3565053..3565132,3566171..3566258,3567260..3567382,3569033..3569189,3569542..3569637,3570199..3570265,3571432..3571594,3578174..3578284,3580629..3580747,3581411..3581587,3582857..3582995)
location: region:3547913-3582995:1
so has part: feature:3547913-3548110:1:exon
so has part: feature:3550454-3550552:1:exon
so has part: feature:3551613-3551727:1:exon
so has part: feature:3552062-3552195:1:exon
so has part: feature:3554230-3554297:1:exon
so has part: feature:3555584-3555678:1:exon
so has part: feature:3555758-3555790:1:exon
so has part: feature:3555885-3555967:1:exon
so has part: feature:3556416-3556581:1:exon
so has part: feature:3557423-3557634:1:exon
so has part: feature:3558588-3558631:1:exon
so has part: feature:3561870-3561974:1:exon
so has part: feature:3562948-3563014:1:exon
so has part: feature:3563112-3563275:1:exon
so has part: feature:3564317-3564479:1:exon
so has part: feature:3565053-3565132:1:exon
so has part: feature:3566171-3566258:1:exon
so has part: feature:3567260-3567382:1:exon
so has part: feature:3569033-3569189:1:exon
so has part: feature:3569542-3569637:1:exon
so has part: feature:3570199-3570265:1:exon
so has part: feature:3571432-3571594:1:exon
so has part: feature:3578174-3578284:1:exon
so has part: feature:3580629-3580747:1:exon
so has part: feature:3581411-3581587:1:exon
so has part: feature:3582857-3582995:1:exon

XP_010714692.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3547913-3548110:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3550454-3550552:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3551613-3551727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3552062-3552195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3554230-3554297:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3555584-3555678:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3555758-3555790:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3555885-3555967:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3556416-3556581:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3557423-3557634:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3558588-3558631:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3561870-3561974:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3562948-3563014:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3563112-3563275:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3564317-3564479:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3565053-3565132:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3566171-3566258:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3567260-3567382:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3569033-3569189:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3569542-3569637:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3570199-3570265:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3571432-3571594:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3578174-3578284:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3580629-3580747:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3581411-3581587:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3582857-3582995:1:exon

U2SURP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: U2SURP
product: U2 snRNP associated SURP domain containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 194 samples with support for all annotated introns
transcript id: XM_019618933.2
SIO_010081: U2SURP
subclass of: SO_0000673
so part of: U2SURP
location: join(3557440..3557634,3561870..3561974,3562948..3563014,3563112..3563275,3564317..3564479,3565053..3565132,3566171..3566258,3567260..3567382,3569033..3569189,3569542..3569637,3570199..3570265,3571432..3571594,3578174..3578284,3580629..3580747,3581411..3581587,3582857..3582995)
location: region:3557440-3582995:1
so has part: feature:3557440-3557634:1:exon
so has part: feature:3561870-3561974:1:exon
so has part: feature:3562948-3563014:1:exon
so has part: feature:3563112-3563275:1:exon
so has part: feature:3564317-3564479:1:exon
so has part: feature:3565053-3565132:1:exon
so has part: feature:3566171-3566258:1:exon
so has part: feature:3567260-3567382:1:exon
so has part: feature:3569033-3569189:1:exon
so has part: feature:3569542-3569637:1:exon
so has part: feature:3570199-3570265:1:exon
so has part: feature:3571432-3571594:1:exon
so has part: feature:3578174-3578284:1:exon
so has part: feature:3580629-3580747:1:exon
so has part: feature:3581411-3581587:1:exon
so has part: feature:3582857-3582995:1:exon

position:3557440:1
position: 3557440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3557440-3557634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3561870-3561974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3562948-3563014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3563112-3563275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3564317-3564479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3565053-3565132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3566171-3566258:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3567260-3567382:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3569033-3569189:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3569542-3569637:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3570199-3570265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3571432-3571594:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3578174-3578284:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3580629-3580747:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3581411-3581587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3582857-3582995:1:exon

U2SURP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: U2SURP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 snRNP-associated SURP motif-containing protein isoform X3
translation: MLQCYPRQKTRKILRRNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSILQGDAPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPNKKGALKEEQRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAWEDWAIYPEPFLIKLQNIFLGLVNIMEDKETEEVPDDLDGAPIEEELDGAPLEDVDGIPIDAAPIDDLDGVPIKSLDDDLDGVPLDTAEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEEIPNQEEESEDEEDTQSSKSEEQHMYSNPIKEEMPESKSSVKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKSDSRSKDKKEKEECTPTRKERKRRHSASPSPSRSSGSRRAKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKGKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKSKH
SIO_010081: U2SURP
subclass of: SO_0000673
so part of: U2SURP
location: join(3557588..3557634,3561870..3561974,3562948..3563014,3563112..3563275,3564317..3564479,3565053..3565132,3566171..3566258,3567260..3567382,3569033..3569189,3569542..3569637,3570199..3570265,3571432..3571594,3578174..3578284,3580629..3580747,3581411..3581587,3582857..3582995)
location: region:3557588-3582995:1
so has part: feature:3557588-3557634:1:exon
so has part: feature:3561870-3561974:1:exon
so has part: feature:3562948-3563014:1:exon
so has part: feature:3563112-3563275:1:exon
so has part: feature:3564317-3564479:1:exon
so has part: feature:3565053-3565132:1:exon
so has part: feature:3566171-3566258:1:exon
so has part: feature:3567260-3567382:1:exon
so has part: feature:3569033-3569189:1:exon
so has part: feature:3569542-3569637:1:exon
so has part: feature:3570199-3570265:1:exon
so has part: feature:3571432-3571594:1:exon
so has part: feature:3578174-3578284:1:exon
so has part: feature:3580629-3580747:1:exon
so has part: feature:3581411-3581587:1:exon
so has part: feature:3582857-3582995:1:exon

XP_019474478.1
type: Protein
SIO_000068: ncbiprotein

position:3557588:1
position: 3557588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3557588-3557634:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3561870-3561974:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3562948-3563014:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3563112-3563275:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3564317-3564479:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3565053-3565132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3566171-3566258:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3567260-3567382:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3569033-3569189:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3569542-3569637:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3570199-3570265:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3571432-3571594:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3578174-3578284:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3580629-3580747:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3581411-3581587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3582857-3582995:1:exon

LOC104912544
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912544
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3590835..3598116
location: region:3590835-3598116:1
so has part: feature:3590835-3598116:1:exon
subclass of: SO_0000011

104912544
type: Gene
SIO_000068: ncbigene

position:3590835:1
position: 3590835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3598116:1
position: 3598116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3590835-3598116:1:exon

LOC104912544
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912544
product: uncharacterized LOC104912544, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_004160925.1
SIO_010081: LOC104912544
subclass of: SO_0000673
so part of: LOC104912544
location: join(3590835..3595650,3595748..3595873,3596141..3596255,3596747..3598116)
location: region:3590835-3598116:1
so has part: feature:3590835-3595650:1:exon
so has part: feature:3595748-3595873:1:exon
so has part: feature:3596141-3596255:1:exon
so has part: feature:3596747-3598116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3590835-3595650:1:exon

position:3595650:1
position: 3595650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3595748-3595873:1:exon

position:3595748:1
position: 3595748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3595873:1
position: 3595873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3596141-3596255:1:exon

position:3596141:1
position: 3596141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3596255:1
position: 3596255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3596747-3598116:1:exon

position:3596747:1
position: 3596747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912544
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912544
product: uncharacterized LOC104912544, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XR_004160926.1
SIO_010081: LOC104912544
subclass of: SO_0000673
so part of: LOC104912544
location: join(3590835..3595077,3595748..3595873,3596141..3596255,3596747..3598116)
location: region:3590835-3598116:1
so has part: feature:3590835-3595077:1:exon
so has part: feature:3595748-3595873:1:exon
so has part: feature:3596141-3596255:1:exon
so has part: feature:3596747-3598116:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3590835-3595077:1:exon

position:3595077:1
position: 3595077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3595748-3595873:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3596141-3596255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3596747-3598116:1:exon

PAQR9
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PAQR9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3598251..3618582)
location: region:3598251-3618582:-1
so has part: feature:3598251-3618582:-1:exon
subclass of: SO_0000010

100542953
type: Gene
SIO_000068: ncbigene

position:3598251:-1
position: 3598251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3618582:-1
position: 3618582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3598251-3618582:-1:exon

PAQR9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PAQR9
product: progestin and adipoQ receptor family member 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010716645.2
SIO_010081: PAQR9
subclass of: SO_0000673
so part of: PAQR9
location: complement(join(3598251..3601641,3618528..3618582))
location: region:3598251-3618582:-1
so has part: feature:3618528-3618582:-1:exon
so has part: feature:3598251-3601641:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3618528-3618582:-1:exon

position:3618528:-1
position: 3618528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3598251-3601641:-1:exon

position:3601641:-1
position: 3601641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PAQR9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PAQR9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: membrane progestin receptor epsilon
translation: MANFIVQHTPEKEYTASTHKEEAAPPARPAALLRWDEVPEDFVECFILSGYRRLHCSAQECLASVLQPTNETLNFWTHFIPLLLFLSRFGRLLLLRGAGDVPFHHPALLPLWCYASGVLLTFAMSCTAHLFSCLSPRLRAAFFYLDYASISYYGFASTVAYSYYLLPGLSLLDAGVLSRYVQQQLGWQLDCSLPIAAYRALVLPVALALAVGCTAACCRSRAACCAYPFAVRTFVFAMPLSMACPIMLESLIFDLRTRNPTLFVYFYRRYFWLLVAAFFNVSKIPERIQPGLFDIVGHSHQLFHIFTFLSIYDQVHYVEDGLAEFLKAAPAAPTYLGTVGYMLLLTVCLAVVVRRFLNVADLCKQD
SIO_010081: PAQR9
subclass of: SO_0000673
so part of: PAQR9
location: complement(join(3600596..3601641,3618528..3618582))
location: region:3600596-3618582:-1
so has part: feature:3618528-3618582:-1:exon
so has part: feature:3600596-3601641:-1:exon

XP_010714947.1
type: Protein
SIO_000068: ncbiprotein

position:3600596:-1
position: 3600596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3618528-3618582:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3600596-3601641:-1:exon

TRPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3626063..3648137
location: region:3626063-3648137:1
so has part: feature:3626063-3648137:1:exon
subclass of: SO_0000010

100542642
type: Gene
SIO_000068: ncbigene

position:3626063:1
position: 3626063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3648137:1
position: 3648137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3626063-3648137:1:exon

TRPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRPC1
product: transient receptor potential cation channel subfamily C member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 215 samples with support for all annotated introns
transcript id: XM_010716391.3
SIO_010081: TRPC1
subclass of: SO_0000673
so part of: TRPC1
location: join(3626063..3626216,3627718..3627872,3629149..3629250,3630045..3630247,3632656..3632787,3633207..3633402,3635000..3635336,3638170..3638309,3640086..3640229,3644144..3644322,3644474..3644675,3645241..3645435,3646242..3648137)
location: region:3626063-3648137:1
so has part: feature:3626063-3626216:1:exon
so has part: feature:3627718-3627872:1:exon
so has part: feature:3629149-3629250:1:exon
so has part: feature:3630045-3630247:1:exon
so has part: feature:3632656-3632787:1:exon
so has part: feature:3633207-3633402:1:exon
so has part: feature:3635000-3635336:1:exon
so has part: feature:3638170-3638309:1:exon
so has part: feature:3640086-3640229:1:exon
so has part: feature:3644144-3644322:1:exon
so has part: feature:3644474-3644675:1:exon
so has part: feature:3645241-3645435:1:exon
so has part: feature:3646242-3648137:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3626063-3626216:1:exon

position:3626216:1
position: 3626216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3627718-3627872:1:exon

position:3627718:1
position: 3627718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3627872:1
position: 3627872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3629149-3629250:1:exon

position:3629149:1
position: 3629149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3629250:1
position: 3629250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3630045-3630247:1:exon

position:3630045:1
position: 3630045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3630247:1
position: 3630247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3632656-3632787:1:exon

position:3632656:1
position: 3632656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3632787:1
position: 3632787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3633207-3633402:1:exon

position:3633207:1
position: 3633207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3633402:1
position: 3633402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3635000-3635336:1:exon

position:3635000:1
position: 3635000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3635336:1
position: 3635336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3638170-3638309:1:exon

position:3638170:1
position: 3638170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3638309:1
position: 3638309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3640086-3640229:1:exon

position:3640086:1
position: 3640086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3640229:1
position: 3640229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3644144-3644322:1:exon

position:3644144:1
position: 3644144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3644322:1
position: 3644322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3644474-3644675:1:exon

position:3644474:1
position: 3644474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3644675:1
position: 3644675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3645241-3645435:1:exon

position:3645241:1
position: 3645241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3645435:1
position: 3645435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3646242-3648137:1:exon

position:3646242:1
position: 3646242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 1 isoform X1
translation: MAALYQSANPSASASPNKLLALKDVRQVKEETTLDEKLFLLACDKGDYYMVKKLLEENSSGEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVGCECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPVLSLCYLIAPKSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLIGMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGFTVNEEERDCAGIFCEKQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPRN
SIO_010081: TRPC1
subclass of: SO_0000673
so part of: TRPC1
location: join(3626081..3626216,3627718..3627872,3629149..3629250,3630045..3630247,3632656..3632787,3633207..3633402,3635000..3635336,3638170..3638309,3640086..3640229,3644144..3644322,3644474..3644675,3645241..3645435,3646242..3646469)
location: region:3626081-3646469:1
so has part: feature:3626081-3626216:1:exon
so has part: feature:3627718-3627872:1:exon
so has part: feature:3629149-3629250:1:exon
so has part: feature:3630045-3630247:1:exon
so has part: feature:3632656-3632787:1:exon
so has part: feature:3633207-3633402:1:exon
so has part: feature:3635000-3635336:1:exon
so has part: feature:3638170-3638309:1:exon
so has part: feature:3640086-3640229:1:exon
so has part: feature:3644144-3644322:1:exon
so has part: feature:3644474-3644675:1:exon
so has part: feature:3645241-3645435:1:exon
so has part: feature:3646242-3646469:1:exon

XP_010714693.1
type: Protein
SIO_000068: ncbiprotein

position:3626081:1
position: 3626081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3646469:1
position: 3646469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3626081-3626216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3627718-3627872:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3629149-3629250:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3630045-3630247:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3632656-3632787:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3633207-3633402:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3635000-3635336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3638170-3638309:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3640086-3640229:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3644144-3644322:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3644474-3644675:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3645241-3645435:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3646242-3646469:1:exon

TRPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRPC1
product: transient receptor potential cation channel subfamily C member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_019618934.2
SIO_010081: TRPC1
subclass of: SO_0000673
so part of: TRPC1
location: join(3626147..3626216,3630045..3630247,3632656..3632787,3633207..3633402,3635000..3635336,3638170..3638309,3640086..3640229,3644144..3644322,3644474..3644675,3645241..3645435,3646242..3648137)
location: region:3626147-3648137:1
so has part: feature:3626147-3626216:1:exon
so has part: feature:3630045-3630247:1:exon
so has part: feature:3632656-3632787:1:exon
so has part: feature:3633207-3633402:1:exon
so has part: feature:3635000-3635336:1:exon
so has part: feature:3638170-3638309:1:exon
so has part: feature:3640086-3640229:1:exon
so has part: feature:3644144-3644322:1:exon
so has part: feature:3644474-3644675:1:exon
so has part: feature:3645241-3645435:1:exon
so has part: feature:3646242-3648137:1:exon

position:3626147:1
position: 3626147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3626147-3626216:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3630045-3630247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3632656-3632787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3633207-3633402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3635000-3635336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3638170-3638309:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3640086-3640229:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3644144-3644322:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3644474-3644675:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3645241-3645435:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3646242-3648137:1:exon

TRPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short transient receptor potential channel 1 isoform X2
translation: MERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVGCECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLMVGIFWPVLSLCYLIAPKSRVGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNENKKNTMGPALERIDYLLIIWLIGMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDYAERKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGFTVNEEERDCAGIFCEKQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPRN
SIO_010081: TRPC1
subclass of: SO_0000673
so part of: TRPC1
location: join(3630051..3630247,3632656..3632787,3633207..3633402,3635000..3635336,3638170..3638309,3640086..3640229,3644144..3644322,3644474..3644675,3645241..3645435,3646242..3646469)
location: region:3630051-3646469:1
so has part: feature:3630051-3630247:1:exon
so has part: feature:3632656-3632787:1:exon
so has part: feature:3633207-3633402:1:exon
so has part: feature:3635000-3635336:1:exon
so has part: feature:3638170-3638309:1:exon
so has part: feature:3640086-3640229:1:exon
so has part: feature:3644144-3644322:1:exon
so has part: feature:3644474-3644675:1:exon
so has part: feature:3645241-3645435:1:exon
so has part: feature:3646242-3646469:1:exon

XP_019474479.1
type: Protein
SIO_000068: ncbiprotein

position:3630051:1
position: 3630051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3630051-3630247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3632656-3632787:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3633207-3633402:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3635000-3635336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3638170-3638309:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3640086-3640229:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3644144-3644322:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3644474-3644675:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3645241-3645435:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3646242-3646469:1:exon

PCOLCE2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PCOLCE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3651653..3672467)
location: region:3651653-3672467:-1
so has part: feature:3651653-3672467:-1:exon
subclass of: SO_0000010

100542798
type: Gene
SIO_000068: ncbigene

position:3651653:-1
position: 3651653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3672467:-1
position: 3672467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3651653-3672467:-1:exon

PCOLCE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PCOLCE2
product: procollagen C-endopeptidase enhancer 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 18 Proteins, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031555067.1
SIO_010081: PCOLCE2
subclass of: SO_0000673
so part of: PCOLCE2
location: complement(join(3651653..3651946,3653497..3653664,3654934..3655017,3657177..3657331,3661319..3661455,3662613..3662737,3663870..3664125,3671592..3671700,3672217..3672467))
location: region:3651653-3672467:-1
so has part: feature:3672217-3672467:-1:exon
so has part: feature:3671592-3671700:-1:exon
so has part: feature:3663870-3664125:-1:exon
so has part: feature:3662613-3662737:-1:exon
so has part: feature:3661319-3661455:-1:exon
so has part: feature:3657177-3657331:-1:exon
so has part: feature:3654934-3655017:-1:exon
so has part: feature:3653497-3653664:-1:exon
so has part: feature:3651653-3651946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3672217-3672467:-1:exon

position:3672217:-1
position: 3672217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3671592-3671700:-1:exon

position:3671592:-1
position: 3671592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3671700:-1
position: 3671700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3663870-3664125:-1:exon

position:3663870:-1
position: 3663870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3664125:-1
position: 3664125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3662613-3662737:-1:exon

position:3662613:-1
position: 3662613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3662737:-1
position: 3662737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3661319-3661455:-1:exon

position:3661319:-1
position: 3661319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661455:-1
position: 3661455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3657177-3657331:-1:exon

position:3657177:-1
position: 3657177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3657331:-1
position: 3657331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3654934-3655017:-1:exon

position:3654934:-1
position: 3654934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3655017:-1
position: 3655017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3653497-3653664:-1:exon

position:3653497:-1
position: 3653497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3653664:-1
position: 3653664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3651653-3651946:-1:exon

position:3651946:-1
position: 3651946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCOLCE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PCOLCE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: procollagen C-endopeptidase enhancer 2
translation: MPGARSPRDTEPLSKNRAQRVTTLGIKDNSLLRALLTAAVRSGEHRVPHHQTLPPRYSPAAAASSLSTATCRPRDEAGRAGGQWPTFTCGGVVSGESGFIGSEGFPGVYPPNSKCTWKITVPEGKVVVLSFRYLDLESDNLCRYDFVDIYSGHTNGQRIGRFCGTVKPGALVSSSNKMLVQMTSDANTAGSGFIAKFSAAEPHERGDQYCGGRLEKPSGSFQTPNWPERDYPAGVTCSWHIVAPKNQLIELKFEKFDVERDNYCRYDYVAVFNGGEINDAKRIGKYCGDSPPAPILSEKNELFIQFLSDLSLTADGFIGHYKFRPKKLPTTTVPPTTTTIPATSVSKPTVALCQQKCKRSGTLESNYCSSNFVITGTVISTTTRAGSLHATISIINVYKEGNLAIQQAGKNMSAKIIVICKQCPLIRRGLNYIIMGQVEEDGRGKIFPNSFVMSFKTKNQKILNALKNKTCYN
SIO_010081: PCOLCE2
subclass of: SO_0000673
so part of: PCOLCE2
location: complement(join(3651810..3651946,3653497..3653664,3654934..3655017,3657177..3657331,3661319..3661455,3662613..3662737,3663870..3664125,3671592..3671700,3672217..3672467))
location: region:3651810-3672467:-1
so has part: feature:3672217-3672467:-1:exon
so has part: feature:3671592-3671700:-1:exon
so has part: feature:3663870-3664125:-1:exon
so has part: feature:3662613-3662737:-1:exon
so has part: feature:3661319-3661455:-1:exon
so has part: feature:3657177-3657331:-1:exon
so has part: feature:3654934-3655017:-1:exon
so has part: feature:3653497-3653664:-1:exon
so has part: feature:3651810-3651946:-1:exon

XP_031410927.1
type: Protein
SIO_000068: ncbiprotein

position:3651810:-1
position: 3651810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3672217-3672467:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3671592-3671700:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3663870-3664125:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3662613-3662737:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3661319-3661455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3657177-3657331:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3654934-3655017:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3653497-3653664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3651810-3651946:-1:exon

PLS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PLS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3672235..3710705
location: region:3672235-3710705:1
so has part: feature:3672235-3710705:1:exon
subclass of: SO_0000010

100541258
type: Gene
SIO_000068: ncbigene