Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 10, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 10, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015020.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015020.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000971.2.\nOn Dec 18, 2014 this sequence version replaced NC_015020.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 29209805
topology: linear
so has quality: SO_0000987
location: 1..29209805
location: region:1-29209805:1
RO_0002162: 9103

NC_015020
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29209805:1
position: 29209805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-29209805:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 10
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2048..2147
location: region:2048-2147:1
so has part: feature:2048-2147:1:region

position:2048:1
position: 2048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2147:1
position: 2147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2048-2147:1:region

TRMT1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRMT1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12454..31967)
location: region:12454-31967:-1
so has part: feature:12454-31967:-1:exon
subclass of: SO_0000010

104912232
type: Gene
SIO_000068: ncbigene

position:12454:-1
position: 12454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31967:-1
position: 31967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12454-31967:-1:exon

TRMT1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRMT1L
product: tRNA methyltransferase 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 164 samples with support for all annotated introns
transcript id: XM_010715527.3
SIO_010081: TRMT1L
subclass of: SO_0000673
so part of: TRMT1L
location: complement(join(12454..13695,13780..13906,14356..14415,15054..15220,15969..16047,17385..17575,19275..19487,20882..21128,22087..22166,23254..23377,25245..25374,25870..25934,26606..26719,28658..28720,29776..29928,31727..31967))
location: region:12454-31967:-1
so has part: feature:31727-31967:-1:exon
so has part: feature:29776-29928:-1:exon
so has part: feature:28658-28720:-1:exon
so has part: feature:26606-26719:-1:exon
so has part: feature:25870-25934:-1:exon
so has part: feature:25245-25374:-1:exon
so has part: feature:23254-23377:-1:exon
so has part: feature:22087-22166:-1:exon
so has part: feature:20882-21128:-1:exon
so has part: feature:19275-19487:-1:exon
so has part: feature:17385-17575:-1:exon
so has part: feature:15969-16047:-1:exon
so has part: feature:15054-15220:-1:exon
so has part: feature:14356-14415:-1:exon
so has part: feature:13780-13906:-1:exon
so has part: feature:12454-13695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:31727-31967:-1:exon

position:31727:-1
position: 31727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29776-29928:-1:exon

position:29776:-1
position: 29776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29928:-1
position: 29928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:28658-28720:-1:exon

position:28658:-1
position: 28658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28720:-1
position: 28720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:26606-26719:-1:exon

position:26606:-1
position: 26606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26719:-1
position: 26719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:25870-25934:-1:exon

position:25870:-1
position: 25870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25934:-1
position: 25934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:25245-25374:-1:exon

position:25245:-1
position: 25245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25374:-1
position: 25374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:23254-23377:-1:exon

position:23254:-1
position: 23254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23377:-1
position: 23377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:22087-22166:-1:exon

position:22087:-1
position: 22087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22166:-1
position: 22166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:20882-21128:-1:exon

position:20882:-1
position: 20882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:21128:-1
position: 21128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:19275-19487:-1:exon

position:19275:-1
position: 19275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:19487:-1
position: 19487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:17385-17575:-1:exon

position:17385:-1
position: 17385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:17575:-1
position: 17575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:15969-16047:-1:exon

position:15969:-1
position: 15969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16047:-1
position: 16047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:15054-15220:-1:exon

position:15054:-1
position: 15054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15220:-1
position: 15220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:14356-14415:-1:exon

position:14356:-1
position: 14356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14415:-1
position: 14415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:13780-13906:-1:exon

position:13780:-1
position: 13780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13906:-1
position: 13906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:12454-13695:-1:exon

position:13695:-1
position: 13695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRMT1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRMT1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TRMT1-like protein
translation: MCICHLPCRIAKPNFVADQTFSKMGAHYHCIICSATITRRTDMIGHINRHVNKGETESRFITAPAPKSSCEVLKEANTDVQVLPNYFTPQKTDSYFNPKMKLNRQLIFCALAVLAEERKPIECLDAFGATGIMGLQWAKHLRSSVKVTINDCNENSVTMIQENCHLNKMKVKVNTKKEDNYEAIGDGDESTDTIEVTKMDANVIMHLRSFDFIHLDPFGTSVNYLDSAFRNVRNLGIVSLTSTDISSLYAKAQHVALRHYGCNIVRTEYYKELAARTVIAAVARSAARCNKGIEVLLAVALEHFVLVVVRVLRGPSPADDSAKKIRYLIHCQWCEERIFQKEGNMVEENPYQQLPCDCHGSMPGRTAVILGPLWSGALFNTGFLRRMLFEAVQYGLDEVQPLLKTVVCEAECTTSKNFSTHSPSDENKQEECGVYIKTPDMLAESDVMPGKRKNNEVMRNATKRQKTDNSAEHPAFYYNIHRHSIKGMNMPKLNKFLNYLSEAGYRVSRTHFDPMGVRTNAPLAQFKTVLMKHSTPTYAGGQTEGPLHLTEDVQVGDQLQAATDNKAKDDEFLEENKSGDSGTVFAEDCPTYSAAD
SIO_010081: TRMT1L
subclass of: SO_0000673
so part of: TRMT1L
location: complement(join(13380..13695,13780..13906,14356..14415,15054..15220,15969..16047,17385..17575,19275..19487,20882..21128,22087..22166,23254..23377,25245..25374,25870..25926))
location: region:13380-25926:-1
so has part: feature:25870-25926:-1:exon
so has part: feature:25245-25374:-1:exon
so has part: feature:23254-23377:-1:exon
so has part: feature:22087-22166:-1:exon
so has part: feature:20882-21128:-1:exon
so has part: feature:19275-19487:-1:exon
so has part: feature:17385-17575:-1:exon
so has part: feature:15969-16047:-1:exon
so has part: feature:15054-15220:-1:exon
so has part: feature:14356-14415:-1:exon
so has part: feature:13780-13906:-1:exon
so has part: feature:13380-13695:-1:exon

XP_010713829.1
type: Protein
SIO_000068: ncbiprotein

position:13380:-1
position: 13380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25926:-1
position: 25926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25870-25926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:25245-25374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23254-23377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:22087-22166:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:20882-21128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:19275-19487:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:17385-17575:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15969-16047:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15054-15220:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:14356-14415:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:13780-13906:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:13380-13695:-1:exon

SWT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SWT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 32919..64190
location: region:32919-64190:1
so has part: feature:32919-64190:1:exon
subclass of: SO_0000010

104912239
type: Gene
SIO_000068: ncbigene

position:32919:1
position: 32919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64190:1
position: 64190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32919-64190:1:exon

SWT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SWT1
product: SWT1 RNA endoribonuclease homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031554940.1
SIO_010081: SWT1
subclass of: SO_0000673
so part of: SWT1
location: join(32919..33076,35426..35484,36676..37408,39026..39100,39689..39818,39943..40045,46825..46967,47785..47972,49205..49343,50076..50221,51596..51804,53495..53617,60650..60716,63723..64190)
location: region:32919-64190:1
so has part: feature:32919-33076:1:exon
so has part: feature:35426-35484:1:exon
so has part: feature:36676-37408:1:exon
so has part: feature:39026-39100:1:exon
so has part: feature:39689-39818:1:exon
so has part: feature:39943-40045:1:exon
so has part: feature:46825-46967:1:exon
so has part: feature:47785-47972:1:exon
so has part: feature:49205-49343:1:exon
so has part: feature:50076-50221:1:exon
so has part: feature:51596-51804:1:exon
so has part: feature:53495-53617:1:exon
so has part: feature:60650-60716:1:exon
so has part: feature:63723-64190:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32919-33076:1:exon

position:33076:1
position: 33076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:35426-35484:1:exon

position:35426:1
position: 35426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35484:1
position: 35484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:36676-37408:1:exon

position:36676:1
position: 36676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37408:1
position: 37408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:39026-39100:1:exon

position:39026:1
position: 39026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39100:1
position: 39100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:39689-39818:1:exon

position:39689:1
position: 39689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39818:1
position: 39818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:39943-40045:1:exon

position:39943:1
position: 39943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40045:1
position: 40045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:46825-46967:1:exon

position:46825:1
position: 46825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46967:1
position: 46967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:47785-47972:1:exon

position:47785:1
position: 47785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:47972:1
position: 47972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:49205-49343:1:exon

position:49205:1
position: 49205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:49343:1
position: 49343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:50076-50221:1:exon

position:50076:1
position: 50076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50221:1
position: 50221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:51596-51804:1:exon

position:51596:1
position: 51596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:51804:1
position: 51804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:53495-53617:1:exon

position:53495:1
position: 53495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:53617:1
position: 53617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:60650-60716:1:exon

position:60650:1
position: 60650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:60716:1
position: 60716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:63723-64190:1:exon

position:63723:1
position: 63723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SWT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SWT1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:63756..63758,aa:OTHER)
transl except: (pos:63843..63845,aa:OTHER)
product: LOW QUALITY PROTEIN: transcriptional protein SWT1
translation: MKCSSPRAAGGLDVQIAAGSSRNSEVTQSYSQTVDRQTEFQRFKQEKGRQEKKPYRSSNTCADGQSQGESPNGSKTTANSLIKYEKRKRIVIQFKSKEATHGKSSGTADVVITSREDHNKGPFDGKERKRHCHSFLVQRDKVVKKKKVELCKPNVKVEQTVLGQLKSSVYNLYVPHKKADRSRKTSEDVRIQKKPPSTSAETVCHDRPFTKKSNMLSRTCEEKYKEEYKEFSKKNQHANKRTSHCSTETLQQWDCCKWKKQNADRVSCSSGTEKGNFEATAFCFKQDFPSPQSSTTFPLPQGCEYLEGDQEMQIVEDLHVARIEKRMAQSVVQTCGELTSMEIDLPEQDLNISAETSSGLNILVVIDTNIMISHLEFVRSLKSEDIPGIPRDDKNLCNKAIVCEVKALCKVDLVTALLNLNVNKRLNCLELQQSKCDREFQKRKESDAHLTFQKTERSDTHLTSQFPNIIPDLEKNLGDALSCILETEMKIVFGNLWMEILYLKPPWTLANLLQCYKKHWVAVFGYVVPRNLLATIEFLYKHFCTGKTLDTSTAVVLLQETKQLLHAFSLRSDYDGVLPRAYEKVNKLYQTCTEVRSDSEQNLSEDSMVLSKSSLCERMEETTPNLQNSEEKRLPPSMHVAQEDRHQEIWSVLEGIWNTMNLYRLEIFQKLESNTVIVKSSFEEAFSGLQKLLAAVNYILEGIRRVLAPNSSFQDIWTLYNFLISHERKIRGGLLPTGXAASQHQAASCICTHGSKDQGVAVTTQGLXPRCSPLDFGPDEVRRAVRGNVQEAKTASFFSQWCCFIIELKGKKKKKESFDSLLVAFPVSSEDLWSDKSFVIY
SIO_010081: SWT1
subclass of: SO_0000673
so part of: SWT1
location: join(33011..33076,35426..35484,36676..37408,39026..39100,39689..39818,39943..40045,46825..46967,47785..47972,49205..49343,50076..50221,51596..51804,53495..53617,60650..60716,63723..64068)
location: region:33011-64068:1
so has part: feature:33011-33076:1:exon
so has part: feature:35426-35484:1:exon
so has part: feature:36676-37408:1:exon
so has part: feature:39026-39100:1:exon
so has part: feature:39689-39818:1:exon
so has part: feature:39943-40045:1:exon
so has part: feature:46825-46967:1:exon
so has part: feature:47785-47972:1:exon
so has part: feature:49205-49343:1:exon
so has part: feature:50076-50221:1:exon
so has part: feature:51596-51804:1:exon
so has part: feature:53495-53617:1:exon
so has part: feature:60650-60716:1:exon
so has part: feature:63723-64068:1:exon

XP_031410800.1
type: Protein
SIO_000068: ncbiprotein

position:33011:1
position: 33011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64068:1
position: 64068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33011-33076:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:35426-35484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:36676-37408:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:39026-39100:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:39689-39818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:39943-40045:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:46825-46967:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:47785-47972:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:49205-49343:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:50076-50221:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:51596-51804:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:53495-53617:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:60650-60716:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:63723-64068:1:exon

IVNS1ABP
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: IVNS1ABP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(65901..77952)
location: region:65901-77952:-1
so has part: feature:65901-77952:-1:exon
subclass of: SO_0000010

100549322
type: Gene
SIO_000068: ncbigene

position:65901:-1
position: 65901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77952:-1
position: 77952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:65901-77952:-1:exon

IVNS1ABP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: IVNS1ABP
product: influenza virus NS1A binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 69 samples with support for all annotated introns
transcript id: XM_010715526.3
SIO_010081: IVNS1ABP
subclass of: SO_0000673
so part of: IVNS1ABP
location: complement(join(65901..67389,67806..67979,68300..68431,68517..68643,68817..68938,69072..69296,69798..69924,71586..71693,73071..73196,73618..73791,74513..74588,74671..74840,75636..75762,77006..77247,77590..77952))
location: region:65901-77952:-1
so has part: feature:77590-77952:-1:exon
so has part: feature:77006-77247:-1:exon
so has part: feature:75636-75762:-1:exon
so has part: feature:74671-74840:-1:exon
so has part: feature:74513-74588:-1:exon
so has part: feature:73618-73791:-1:exon
so has part: feature:73071-73196:-1:exon
so has part: feature:71586-71693:-1:exon
so has part: feature:69798-69924:-1:exon
so has part: feature:69072-69296:-1:exon
so has part: feature:68817-68938:-1:exon
so has part: feature:68517-68643:-1:exon
so has part: feature:68300-68431:-1:exon
so has part: feature:67806-67979:-1:exon
so has part: feature:65901-67389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:77590-77952:-1:exon

position:77590:-1
position: 77590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:77006-77247:-1:exon

position:77006:-1
position: 77006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:77247:-1
position: 77247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:75636-75762:-1:exon

position:75636:-1
position: 75636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75762:-1
position: 75762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:74671-74840:-1:exon

position:74671:-1
position: 74671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74840:-1
position: 74840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:74513-74588:-1:exon

position:74513:-1
position: 74513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74588:-1
position: 74588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:73618-73791:-1:exon

position:73618:-1
position: 73618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73791:-1
position: 73791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:73071-73196:-1:exon

position:73071:-1
position: 73071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:73196:-1
position: 73196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:71586-71693:-1:exon

position:71586:-1
position: 71586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:71693:-1
position: 71693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:69798-69924:-1:exon

position:69798:-1
position: 69798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69924:-1
position: 69924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:69072-69296:-1:exon

position:69072:-1
position: 69072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69296:-1
position: 69296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:68817-68938:-1:exon

position:68817:-1
position: 68817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68938:-1
position: 68938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:68517-68643:-1:exon

position:68517:-1
position: 68517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68643:-1
position: 68643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:68300-68431:-1:exon

position:68300:-1
position: 68300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:68431:-1
position: 68431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:67806-67979:-1:exon

position:67806:-1
position: 67806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:67979:-1
position: 67979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:65901-67389:-1:exon

position:67389:-1
position: 67389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IVNS1ABP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: IVNS1ABP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: influenza virus NS1A-binding protein
translation: MIPNGYLMFEDENFIESSVAKLNALRKSGQFCDVRLQVCGHEMLAHRAVLACCSPYLFEIFNSDSDSHGISHVKFDDLNPDAVEVLLNYAYTAQLKADKELVKDVYSAAKKLRMERVKQVCGDYLLSKMDVQSCISYRNFVSCMGDSRLLSKIDGYIQEHLLQISEQEEFLKLPRLKLEVMLEDSVGLPSNGKLYTKVINWVQRSIWENGDSLEDLMEEVQTLYYSADHKLLDGNLLDGQAEVYGSDDDHIQFVQKKPPRENDHKQISSSSSGSLSPSATVHSPKHEWKIIASEKTSSNTYLCLAVLDSVLCVIFLHGRSSPHSSPTSTPRLLKSLSFELQPNDVIEKPMSPMQYARSGLGTAELNGKLIAAGGYNREECLRTVECYDPQKDTWTFIAPMRTPRARFQMAVLMGQLYVVGGSNGHSDDLSCGEMYEPEIDDWTPVPELRTNRCNAGVCALNGRLYIVGGSDPYGQKGLKNCDVFDPITKSWTSCAPLNIRRHQSAVCELGGHLYIIGGAESWNCLSSVERYNPENNTWTLMAPMNVARRGAGVAVHDGKLFVGGGFDGSHAVSCMEMYDPAKNEWKIMGNMTTPRSNAGITTVANTIYAVGGFDGNEFLNTVEVYNPESNEWSPYTKIYKF
SIO_010081: IVNS1ABP
subclass of: SO_0000673
so part of: IVNS1ABP
location: complement(join(67136..67389,67806..67979,68300..68431,68517..68643,68817..68938,69072..69296,69798..69924,71586..71693,73071..73196,73618..73791,74513..74588,74671..74840,75636..75746))
location: region:67136-75746:-1
so has part: feature:75636-75746:-1:exon
so has part: feature:74671-74840:-1:exon
so has part: feature:74513-74588:-1:exon
so has part: feature:73618-73791:-1:exon
so has part: feature:73071-73196:-1:exon
so has part: feature:71586-71693:-1:exon
so has part: feature:69798-69924:-1:exon
so has part: feature:69072-69296:-1:exon
so has part: feature:68817-68938:-1:exon
so has part: feature:68517-68643:-1:exon
so has part: feature:68300-68431:-1:exon
so has part: feature:67806-67979:-1:exon
so has part: feature:67136-67389:-1:exon

XP_010713828.1
type: Protein
SIO_000068: ncbiprotein

position:67136:-1
position: 67136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75746:-1
position: 75746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:75636-75746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74671-74840:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:74513-74588:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:73618-73791:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:73071-73196:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:71586-71693:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:69798-69924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:69072-69296:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:68817-68938:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:68517-68643:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:68300-68431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:67806-67979:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:67136-67389:-1:exon

LOC116216963
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116216963
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 118346..152649
location: region:118346-152649:1
so has part: feature:118346-152649:1:exon
subclass of: SO_0000011

116216963
type: Gene
SIO_000068: ncbigene

position:118346:1
position: 118346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152649:1
position: 152649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:118346-152649:1:exon

LOC116216963
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216963
product: uncharacterized LOC116216963, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004160709.1
SIO_010081: LOC116216963
subclass of: SO_0000673
so part of: LOC116216963
location: join(118346..118417,143407..143501,146910..149173,149501..149666,151428..152649)
location: region:118346-152649:1
so has part: feature:118346-118417:1:exon
so has part: feature:143407-143501:1:exon
so has part: feature:146910-149173:1:exon
so has part: feature:149501-149666:1:exon
so has part: feature:151428-152649:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:118346-118417:1:exon

position:118417:1
position: 118417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:143407-143501:1:exon

position:143407:1
position: 143407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:143501:1
position: 143501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:146910-149173:1:exon

position:146910:1
position: 146910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149173:1
position: 149173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:149501-149666:1:exon

position:149501:1
position: 149501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:149666:1
position: 149666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:151428-152649:1:exon

position:151428:1
position: 151428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116216963
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216963
product: uncharacterized LOC116216963, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004160710.1
SIO_010081: LOC116216963
subclass of: SO_0000673
so part of: LOC116216963
location: join(145854..146301,146910..149173,149501..149666,151428..152649)
location: region:145854-152649:1
so has part: feature:145854-146301:1:exon
so has part: feature:146910-149173:1:exon
so has part: feature:149501-149666:1:exon
so has part: feature:151428-152649:1:exon

position:145854:1
position: 145854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:145854-146301:1:exon

position:146301:1
position: 146301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:146910-149173:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:149501-149666:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:151428-152649:1:exon

HMCN1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HMCN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 191173..375453
location: region:191173-375453:1
so has part: feature:191173-375453:1:exon
subclass of: SO_0000010

100549629
type: Gene
SIO_000068: ncbigene

position:191173:1
position: 191173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:375453:1
position: 375453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191173-375453:1:exon

HMCN1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HMCN1
product: hemicentin 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031554941.1
SIO_010081: HMCN1
subclass of: SO_0000673
so part of: HMCN1
location: join(191173..191202,193956..194112,223727..223797,229723..229881,230396..230518,241609..241780,244547..244653,250049..250169,250704..250967,251143..251287,255279..255400,261862..262137,263034..263175,263593..263720,264264..264377,265091..265249,265988..266182,267163..267261,268554..268681,270163..270307,275338..275450,276847..277006,277465..277630,279604..279731,281459..281731,282760..282855,283214..283408,284408..284538,285209..285356,285843..285969,286975..287129,289066..289344,290011..290292,291156..291264,291861..292030,292250..292404,293185..293308,293787..293888,295155..295331,297984..298135,298893..299016,302867..303042,303334..303430,305939..306061,307738..307899,308567..308848,310245..310412,313219..313332,316380..316466,316873..317064,317655..317828,318964..319077,320401..320546,322104..322254,323077..323280,324014..324127,324914..325101,325608..325704,328598..328759,329800..329913,330038..330240,330464..330545,330679..330810,331046..331195,332508..332667,333287..333411,334729..334912,335079..335176,335679..335957,336425..336615,337965..338046,338798..338934,341948..342089,343177..343321,344148..344275,344656..344812,344991..345112,345304..345468,345666..345773,346008..346145,346280..346414,346677..346946,347294..347484,347854..348067,348965..349099,349658..349848,350518..350599,351319..351588,352053..352223,352448..352618,353521..353691,354232..354402,355084..355254,359191..359361,359762..359911,360256..360393,360707..360828,362287..362524,363988..364050,365322..365441,365669..365803,366118..366231,366554..366679,367216..367344,370497..370847,373164..373283,373912..374038,374565..375453)
location: region:191173-375453:1
so has part: feature:191173-191202:1:exon
so has part: feature:193956-194112:1:exon
so has part: feature:223727-223797:1:exon
so has part: feature:229723-229881:1:exon
so has part: feature:230396-230518:1:exon
so has part: feature:241609-241780:1:exon
so has part: feature:244547-244653:1:exon
so has part: feature:250049-250169:1:exon
so has part: feature:250704-250967:1:exon
so has part: feature:251143-251287:1:exon
so has part: feature:255279-255400:1:exon
so has part: feature:261862-262137:1:exon
so has part: feature:263034-263175:1:exon
so has part: feature:263593-263720:1:exon
so has part: feature:264264-264377:1:exon
so has part: feature:265091-265249:1:exon
so has part: feature:265988-266182:1:exon
so has part: feature:267163-267261:1:exon
so has part: feature:268554-268681:1:exon
so has part: feature:270163-270307:1:exon
so has part: feature:275338-275450:1:exon
so has part: feature:276847-277006:1:exon
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SIO_000628: feature:336425-336615:1:exon

position:336425:1
position: 336425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:336615:1
position: 336615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 71
SIO_000628: feature:337965-338046:1:exon

position:337965:1
position: 337965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338046:1
position: 338046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 72
SIO_000628: feature:338798-338934:1:exon

position:338798:1
position: 338798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:338934:1
position: 338934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 73
SIO_000628: feature:341948-342089:1:exon

position:341948:1
position: 341948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342089:1
position: 342089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 74
SIO_000628: feature:343177-343321:1:exon

position:343177:1
position: 343177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343321:1
position: 343321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 75
SIO_000628: feature:344148-344275:1:exon

position:344148:1
position: 344148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344275:1
position: 344275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 76
SIO_000628: feature:344656-344812:1:exon

position:344656:1
position: 344656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:344812:1
position: 344812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 77
SIO_000628: feature:344991-345112:1:exon

position:344991:1
position: 344991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345112:1
position: 345112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 78
SIO_000628: feature:345304-345468:1:exon

position:345304:1
position: 345304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:345468:1
position: 345468
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 79
SIO_000628: feature:345666-345773:1:exon

position:345666:1
position: 345666
reference: sequence
type: ForwardStrandPosition
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position:345773:1
position: 345773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 80
SIO_000628: feature:346008-346145:1:exon

position:346008:1
position: 346008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346145:1
position: 346145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 81
SIO_000628: feature:346280-346414:1:exon

position:346280:1
position: 346280
reference: sequence
type: ForwardStrandPosition
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position:346414:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 82
SIO_000628: feature:346677-346946:1:exon

position:346677:1
position: 346677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346946:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 83
SIO_000628: feature:347294-347484:1:exon

position:347294:1
position: 347294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:347484:1
position: 347484
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 84
SIO_000628: feature:347854-348067:1:exon

position:347854:1
position: 347854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348067:1
position: 348067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 85
SIO_000628: feature:348965-349099:1:exon

position:348965:1
position: 348965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349099:1
position: 349099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 86
SIO_000628: feature:349658-349848:1:exon

position:349658:1
position: 349658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:349848:1
position: 349848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 87
SIO_000628: feature:350518-350599:1:exon

position:350518:1
position: 350518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:350599:1
position: 350599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 88
SIO_000628: feature:351319-351588:1:exon

position:351319:1
position: 351319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:351588:1
position: 351588
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 89
SIO_000628: feature:352053-352223:1:exon

position:352053:1
position: 352053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352223:1
position: 352223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 90
SIO_000628: feature:352448-352618:1:exon

position:352448:1
position: 352448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:352618:1
position: 352618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 91
SIO_000628: feature:353521-353691:1:exon

position:353521:1
position: 353521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353691:1
position: 353691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 92
SIO_000628: feature:354232-354402:1:exon

position:354232:1
position: 354232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354402:1
position: 354402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 93
SIO_000628: feature:355084-355254:1:exon

position:355084:1
position: 355084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:355254:1
position: 355254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 94
SIO_000628: feature:359191-359361:1:exon

position:359191:1
position: 359191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359361:1
position: 359361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 95
SIO_000628: feature:359762-359911:1:exon

position:359762:1
position: 359762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359911:1
position: 359911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 96
SIO_000628: feature:360256-360393:1:exon

position:360256:1
position: 360256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360393:1
position: 360393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 97
SIO_000628: feature:360707-360828:1:exon

position:360707:1
position: 360707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360828:1
position: 360828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 98
SIO_000628: feature:362287-362524:1:exon

position:362287:1
position: 362287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:362524:1
position: 362524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 99
SIO_000628: feature:363988-364050:1:exon

position:363988:1
position: 363988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364050:1
position: 364050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 100
SIO_000628: feature:365322-365441:1:exon

position:365322:1
position: 365322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365441:1
position: 365441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 101
SIO_000628: feature:365669-365803:1:exon

position:365669:1
position: 365669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365803:1
position: 365803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 102
SIO_000628: feature:366118-366231:1:exon

position:366118:1
position: 366118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366231:1
position: 366231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 103
SIO_000628: feature:366554-366679:1:exon

position:366554:1
position: 366554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366679:1
position: 366679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 104
SIO_000628: feature:367216-367344:1:exon

position:367216:1
position: 367216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:367344:1
position: 367344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 105
SIO_000628: feature:370497-370847:1:exon

position:370497:1
position: 370497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:370847:1
position: 370847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 106
SIO_000628: feature:373164-373283:1:exon

position:373164:1
position: 373164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373283:1
position: 373283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 107
SIO_000628: feature:373912-374038:1:exon

position:373912:1
position: 373912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374038:1
position: 374038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 108
SIO_000628: feature:374565-375453:1:exon

position:374565:1
position: 374565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HMCN1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HMCN1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: hemicentin-1
translation: MEQIETKAQKGASTLAFVFDVTGSMYDDLVQVIEGASKILETSLKRPKRPLYNFALVPFHDPEIGPVTITTDPKKFQFELRELYVQGGGDCPEMSIGAIKIALEISLPGSFIYVFTDARSKDYKLTHEVLQLIQQKQSQVVFVLTGDCDDRNHIGYKVYEEIASTSSGQVFHLDKKQVNEVLKWVEEAVQASKVHLLSTDHLTMAENTWQIPFDPSLKEVTVSLSGPSPAIEIHDPLGKQISKGLGLNELLNIHNSAKVVNVKDPEPGTWTIKTSSSGRHSVRITGLSTIEFRAGFSKKPTLDFKKTSSRPVQGIPTFVLLNTTGILLPARVDCLELLSISGEPLKTLPVKYYPDRKPYGLWNISDFIPPDEAFFLKITGYDKDGYLFQRVSSVSFSSITPDAPKVTMPNKTPGYYLQPGSVPCHVESLIPFTQHFTKNGVKLGVDQLFKESSSMSWDINQVSLSDEGFYECIATNAAGTGRAQTFLDVSEPPPVIQVPNNVTAILREGAILTCLVVSTMRYNLTWQRNGRDVRLQESLRMKIMSNLSLEVKAVEFTDAGKYNCIASNKDGSTMASVFLTVQEPPKIVISPKDQTFTEGSEVSIKCSSTGYPKPTVVWTHNEMFIVGSNRYRLTPEGTLIIKQAVPKDAGVYGCLASNSAGTEKQTSILTYIKGPTVTIVQSEILVALGDTTIMECKTTGIPHPQVKWFKGDLELRASAFLIIDTHQGLLKIQETQELDAGDYTCVATNDAGRASGKITLDVGSPPVFTQEPSDESVDIGSNITLPCYVQGYPEPKVKWKRLSGASVFSRPLAVSSISQLRTGALSINNLWISDEGTYVCEAENQFGRIQSQPATITVTGLVAPLIGISPATANVIEGQQLTLPCVLLAGNPIPDRKWIKNSVVLVPNPYINVRRDGSLHLERVRLQDGGEYTCMASNVAGTNNKTTTVNVYVLPIIQHGQQIFSTVEGIPVTLPCKASGVPKPTITWSKKGEIIFPSNGKFSTGSDGSLYVVSPEGGETGEYVCTATNAAGYATRKVQLTVYVKPRVSRPEDQQGHGPLEISVISGEDVTLSCEVKSLPPPIITWAKETQLISPFSLRHTFLPSGSMKISETQVSDSGMYFCVATNIAGNVTQSVKLRVHVPPKIQRGHQIVKVQAGHRVDIPCSAQGNPPPAITWFRGSSAVPIDSRQPTHSLDGALSISNIQLSNAGIYRCIATNAAGTDTSEITIQVQEPPTIGDLDPPYNNPFQERMANQRVAFPCPVKGIPKPVIKWLHNGRELTGREPGISVLEDDMLLIIASVTPSNNGEYICVATNEAGSTERKYNLKVHVPPEIRDQEKVTNTSVVVNHPASLFCEVFGNPFPIISWYKEDIQVVESNTLQILQNGKILKLLKATVDDAGQYSCKAINVAGSSEKLFNLDILVPPSIIGADTTSEIAVILNQEMSLECRAKGFPFPDIHWFRDSKPLFLGDPNFELLEKGQVLHIKSARRVDKGHYQCSATNTAGKQIKEVKLIIHVPPSIKGGNITTEISALLNNLINLDCETKGIPVPTITWYKEGRPIISSPQALYVDKGQFLQIPHAQVSDSAKYTCHVTNAAGAAEKIYEVDVYVPPVIEGDAETAQSRQVVAGNSVTLECKAAGNPSPLLTWLKDGVPVKASDNLRVVSGGKKLEILSAVEADQGQYLCVATSIAGEQEIKYGVEILVPPFVEGGDEILDYTVVLHSPLELDCLATGTPSPTITWLKGGQPIEEGTGRMILLNGQKFLISRAQVSDTGHYKCVAANMAGEHEREFIVTVHVPPTIKSAGASERAVVLHKRVTLQCIANGIPSPSITWLKDGQPVNTARGNTRLESSGRVLQVVEAMLEDAGRYTCVATNAAGEAQQHIQLHVQEPPSLEDAGKMLNETVVVNNPVHLECRALGNPLPAITWYKDSRPLTSATSVTFLNKGQVLEIEGAQISDTGVYRCVAVNTAGTAELSYSLQVHVPPSISDSSDMVTAVVNH…
SIO_010081: HMCN1
subclass of: SO_0000673
so part of: HMCN1
location: join(191173..191202,193956..194112,223727..223797,229723..229881,230396..230518,241609..241780,244547..244653,250049..250169,250704..250967,251143..251287,255279..255400,261862..262137,263034..263175,263593..263720,264264..264377,265091..265249,265988..266182,267163..267261,268554..268681,270163..270307,275338..275450,276847..277006,277465..277630,279604..279731,281459..281731,282760..282855,283214..283408,284408..284538,285209..285356,285843..285969,286975..287129,289066..289344,290011..290292,291156..291264,291861..292030,292250..292404,293185..293308,293787..293888,295155..295331,297984..298135,298893..299016,302867..303042,303334..303430,305939..306061,307738..307899,308567..308848,310245..310412,313219..313332,316380..316466,316873..317064,317655..317828,318964..319077,320401..320546,322104..322254,323077..323280,324014..324127,324914..325101,325608..325704,328598..328759,329800..329913,330038..330240,330464..330545,330679..330810,331046..331195,332508..332667,333287..333411,334729..334912,335079..335176,335679..335957,336425..336615,337965..338046,338798..338934,341948..342089,343177..343321,344148..344275,344656..344812,344991..345112,345304..345468,345666..345773,346008..346145,346280..346414,346677..346946,347294..347484,347854..348067,348965..349099,349658..349848,350518..350599,351319..351588,352053..352223,352448..352618,353521..353691,354232..354402,355084..355254,359191..359361,359762..359911,360256..360393,360707..360828,362287..362524,363988..364050,365322..365441,365669..365803,366118..366231,366554..366679,367216..367344,370497..370847,373164..373283,373912..374038,374565..374931)
location: region:191173-374931:1
so has part: feature:191173-191202:1:exon
so has part: feature:193956-194112:1:exon
so has part: feature:223727-223797:1:exon
so has part: feature:229723-229881:1:exon
so has part: feature:230396-230518:1:exon
so has part: feature:241609-241780:1:exon
so has part: feature:244547-244653:1:exon
so has part: feature:250049-250169:1:exon
so has part: feature:250704-250967:1:exon
so has part: feature:251143-251287:1:exon
so has part: feature:255279-255400:1:exon
so has part: feature:261862-262137:1:exon
so has part: feature:263034-263175:1:exon
so has part: feature:263593-263720:1:exon
so has part: feature:264264-264377:1:exon
so has part: feature:265091-265249:1:exon
so has part: feature:265988-266182:1:exon
so has part: feature:267163-267261:1:exon
so has part: feature:268554-268681:1:exon
so has part: feature:270163-270307:1:exon
so has part: feature:275338-275450:1:exon
so has part: feature:276847-277006:1:exon
so has part: feature:277465-277630:1:exon
so has part: feature:279604-279731:1:exon
so has part: feature:281459-281731:1:exon
so has part: feature:282760-282855:1:exon
so has part: feature:283214-283408:1:exon
so has part: feature:284408-284538:1:exon
so has part: feature:285209-285356:1:exon
so has part: feature:285843-285969:1:exon
so has part: feature:286975-287129:1:exon
so has part: feature:289066-289344:1:exon
so has part: feature:290011-290292:1:exon
so has part: feature:291156-291264:1:exon
so has part: feature:291861-292030:1:exon
so has part: feature:292250-292404:1:exon
so has part: feature:293185-293308:1:exon
so has part: feature:293787-293888:1:exon
so has part: feature:295155-295331:1:exon
so has part: feature:297984-298135:1:exon
so has part: feature:298893-299016:1:exon
so has part: feature:302867-303042:1:exon
so has part: feature:303334-303430:1:exon
so has part: feature:305939-306061:1:exon
so has part: feature:307738-307899:1:exon
so has part: feature:308567-308848:1:exon
so has part: feature:310245-310412:1:exon
so has part: feature:313219-313332:1:exon
so has part: feature:316380-316466:1:exon
so has part: feature:316873-317064:1:exon
so has part: feature:317655-317828:1:exon
so has part: feature:318964-319077:1:exon
so has part: feature:320401-320546:1:exon
so has part: feature:322104-322254:1:exon
so has part: feature:323077-323280:1:exon
so has part: feature:324014-324127:1:exon
so has part: feature:324914-325101:1:exon
so has part: feature:325608-325704:1:exon
so has part: feature:328598-328759:1:exon
so has part: feature:329800-329913:1:exon
so has part: feature:330038-330240:1:exon
so has part: feature:330464-330545:1:exon
so has part: feature:330679-330810:1:exon
so has part: feature:331046-331195:1:exon
so has part: feature:332508-332667:1:exon
so has part: feature:333287-333411:1:exon

XP_031410801.1
type: Protein
SIO_000068: ncbiprotein

position:374931:1
position: 374931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:191173-191202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:193956-194112:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:223727-223797:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229723-229881:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230396-230518:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:241609-241780:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:244547-244653:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:250049-250169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:250704-250967:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:251143-251287:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:255279-255400:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:261862-262137:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:263034-263175:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:263593-263720:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:264264-264377:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:265091-265249:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:265988-266182:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:267163-267261:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:268554-268681:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:270163-270307:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:275338-275450:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:276847-277006:1:exon

urn:…
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SIO_000628: feature:277465-277630:1:exon

urn:…
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SIO_000628: feature:279604-279731:1:exon

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SIO_000628: feature:281459-281731:1:exon

urn:…
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SIO_000628: feature:282760-282855:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:283214-283408:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:284408-284538:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:285209-285356:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:285843-285969:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:286975-287129:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:289066-289344:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:290011-290292:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:291156-291264:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:291861-292030:1:exon

urn:…
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SIO_000628: feature:292250-292404:1:exon

urn:…
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SIO_000628: feature:293185-293308:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:293787-293888:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:295155-295331:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:297984-298135:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:298893-299016:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:302867-303042:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:303334-303430:1:exon

urn:…
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SIO_000628: feature:305939-306061:1:exon

urn:…
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SIO_000628: feature:307738-307899:1:exon

urn:…
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SIO_000628: feature:308567-308848:1:exon

urn:…
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SIO_000628: feature:310245-310412:1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:313219-313332:1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:316380-316466:1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:316873-317064:1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:317655-317828:1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:318964-319077:1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:320401-320546:1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:322104-322254:1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:323077-323280:1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:324014-324127:1:exon

urn:…
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SIO_000628: feature:324914-325101:1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:325608-325704:1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:328598-328759:1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:329800-329913:1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:330038-330240:1:exon

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SIO_000300: 62
SIO_000628: feature:330464-330545:1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:330679-330810:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:331046-331195:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:332508-332667:1:exon

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SIO_000628: feature:333287-333411:1:exon

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SIO_000628: feature:334729-334912:1:exon

urn:…
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SIO_000628: feature:335079-335176:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:335679-335957:1:exon

urn:…
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SIO_000628: feature:336425-336615:1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:337965-338046:1:exon

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SIO_000628: feature:338798-338934:1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:341948-342089:1:exon

urn:…
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SIO_000628: feature:343177-343321:1:exon

urn:…
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SIO_000628: feature:344148-344275:1:exon

urn:…
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SIO_000628: feature:344656-344812:1:exon

urn:…
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SIO_000628: feature:344991-345112:1:exon

urn:…
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SIO_000628: feature:345304-345468:1:exon

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SIO_000628: feature:345666-345773:1:exon

urn:…
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SIO_000628: feature:346008-346145:1:exon

urn:…
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SIO_000628: feature:346280-346414:1:exon

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SIO_000628: feature:346677-346946:1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:347294-347484:1:exon

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SIO_000628: feature:347854-348067:1:exon

urn:…
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SIO_000628: feature:348965-349099:1:exon

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SIO_000628: feature:349658-349848:1:exon

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SIO_000628: feature:350518-350599:1:exon

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SIO_000628: feature:351319-351588:1:exon

urn:…
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SIO_000628: feature:352053-352223:1:exon

urn:…
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SIO_000628: feature:352448-352618:1:exon

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SIO_000628: feature:353521-353691:1:exon

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SIO_000628: feature:354232-354402:1:exon

urn:…
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SIO_000628: feature:355084-355254:1:exon

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SIO_000628: feature:359191-359361:1:exon

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SIO_000628: feature:359762-359911:1:exon

urn:…
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SIO_000628: feature:360256-360393:1:exon

urn:…
SIO_000300: 97
SIO_000628: feature:360707-360828:1:exon

urn:…
SIO_000300: 98
SIO_000628: feature:362287-362524:1:exon

urn:…
SIO_000300: 99
SIO_000628: feature:363988-364050:1:exon

urn:…
SIO_000300: 100
SIO_000628: feature:365322-365441:1:exon

urn:…
SIO_000300: 101
SIO_000628: feature:365669-365803:1:exon

urn:…
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SIO_000628: feature:366118-366231:1:exon

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SIO_000628: feature:366554-366679:1:exon

urn:…
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SIO_000628: feature:367216-367344:1:exon

urn:…
SIO_000300: 105
SIO_000628: feature:370497-370847:1:exon

urn:…
SIO_000300: 106
SIO_000628: feature:373164-373283:1:exon

urn:…
SIO_000300: 107
SIO_000628: feature:373912-374038:1:exon

urn:…
SIO_000300: 108
SIO_000628: feature:374565-374931:1:exon

PRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 394188..409603
location: region:394188-409603:1
so has part: feature:394188-409603:1:exon
subclass of: SO_0000010

104912235
type: Gene
SIO_000068: ncbigene

position:394188:1
position: 394188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:409603:1
position: 409603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:394188-409603:1:exon

PRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PRG4
product: proteoglycan 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031554942.1
SIO_010081: PRG4
subclass of: SO_0000673
so part of: PRG4
location: join(394188..394281,398123..398242,398480..398572,401514..405050,406047..406136,406281..406420,407076..407232,408085..408264,408470..408595,409500..409603)
location: region:394188-409603:1
so has part: feature:394188-394281:1:exon
so has part: feature:398123-398242:1:exon
so has part: feature:398480-398572:1:exon
so has part: feature:401514-405050:1:exon
so has part: feature:406047-406136:1:exon
so has part: feature:406281-406420:1:exon
so has part: feature:407076-407232:1:exon
so has part: feature:408085-408264:1:exon
so has part: feature:408470-408595:1:exon
so has part: feature:409500-409603:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:394188-394281:1:exon

position:394281:1
position: 394281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:398123-398242:1:exon

position:398123:1
position: 398123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398242:1
position: 398242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:398480-398572:1:exon

position:398480:1
position: 398480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:398572:1
position: 398572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:401514-405050:1:exon

position:401514:1
position: 401514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:405050:1
position: 405050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:406047-406136:1:exon

position:406047:1
position: 406047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406136:1
position: 406136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:406281-406420:1:exon

position:406281:1
position: 406281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:406420:1
position: 406420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:407076-407232:1:exon

position:407076:1
position: 407076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:407232:1
position: 407232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:408085-408264:1:exon

position:408085:1
position: 408085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408264:1
position: 408264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:408470-408595:1:exon

position:408470:1
position: 408470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:408595:1
position: 408595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:409500-409603:1:exon

position:409500:1
position: 409500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteoglycan 4
translation: MSYLKVMIIWNIICVSLVILSLSLIQEVASQAVSCKGRCFEVYQRGRECDCDIDCKRYGKCCPDYDEHCKELHTEKPVPKIPPPNKSTSKRSSTDEEKKPEKEYIFPLTDTSNATSPPPTTKQPDTTASTEAITTKPFTLKPTLPATTIITTKPTTTTQKAEETIPEATEAPKTPKDEDTTPPTTEAQTTPKDEETTPEATEGPTTPKAEEETIPEATEAPTTPKAEETTPIATEAPTTPKAEETTPEATEAPTTPKEEETTPEATEAPTTPKEEETTPEVTEAPTTPKEEETTPEATEAPTTPKAEETTPEATEAPTTPKAEEETTPEVTEAPTTPKAEEETTPEATEAPTTPKAEVTTPVATEAATTPNEEKTTPDATEAPTTPKEEEETTPIATEAPTTPKEEERTPETTEAPTAPKAEEETTPEATEAPTTPKAEATEVQTTPKAEEETTPEATEAPTSPKAEETTPVATEAPTTPKAEETTPEATEAPTTPKEEEKTPEATEAPKTPKAEEETTPEVTEAPTTPKAEETTPEATEAPTTPKAEETTPEATEAMTTPKAEEETTPEVTEAPTTPKEEETTPIATEAPTTPKAEETTPVATEASTTPKAEEETTPEATEAPTTPKAEETTPETTEAPTTHKAEETTPEATGAPTTPKAEVTTPEATEAPTTPKEKEETTPEATEAPTTPKAEETTPEARDATTTAKAKETTPEAAEAPTTPKVKETTLAATEFPTIPKAEDTTPAATEAVATPKAEGMTSACTEAPATSKVEVSTPEPIETPTPKAKEITPEATETPSTHKVKETTLAATVASTTPKARETTLKAKKTTTPKVVETTPVTTEVPTSKTEEPMSEATDPPTTPKSKGTTPKGTERPTAPKSEQKPPEATEAPTTPKAEETTPKATEAPTTKVDSPTTPKAEEKTASATKVPTIPKEKEIMPKATDALISLSDSPIVPEVEPSTPAPTNVKQGTTTIYSKLVSITDKSDRTTTKPLMTPVTMKSSTKKETTTEKKEVTTPKKDKTTVLKDILKGRRDTTTVTIPDTTPAPNQAVSTTAELEATTTYKKAATTATEGEATPATQDKTPTPKETSPSTANREQAAGAITVTTSAATSIIHKPTTLPTTAKTDSTSKPRAIVTTTKRDTTMETTWAVPAVAECIIPSKETTAGEEEMTTLAKETSYTTEKETEDAPEKSPSLDKKEETTVIRGRTTTDKKDTIEEMFLVPRGTSKPAIRFQEITDTHDEPSPPSPETMPVEEPEINKPLIQIADLPVLSGGTEMGMANEKDLCSGKPADSMVALPNGTLAIFRGHYYWLLNGRTPPTTSPQRISVGWGIPSPIDAVFSRCNCDGKTFFIKGPLYWRFTNGVMDIGYPKPLTNGFAGLSGKIRAALPVASYNGRPESVYFIKRDGNMQQYVYRQEPARKCQRKARITIRYPAFVPRLVIRRRFQRAVGMPTVIQTVRINPYQSGVLRKEIKVTAYWRGLPKVVHSTISVPNYNKPDGYDYYAFSYNRYYSLDVGKRIARPVTALTGKTVSKDWYNCPEK
SIO_010081: PRG4
subclass of: SO_0000673
so part of: PRG4
location: join(394188..394281,398123..398242,398480..398572,401514..405050,406047..406136,406281..406420,407076..407232,408085..408264,408470..408595,409500..409603)
location: region:394188-409603:1
so has part: feature:394188-394281:1:exon
so has part: feature:398123-398242:1:exon
so has part: feature:398480-398572:1:exon
so has part: feature:401514-405050:1:exon
so has part: feature:406047-406136:1:exon
so has part: feature:406281-406420:1:exon
so has part: feature:407076-407232:1:exon
so has part: feature:408085-408264:1:exon
so has part: feature:408470-408595:1:exon
so has part: feature:409500-409603:1:exon

XP_031410802.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:394188-394281:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:398123-398242:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:398480-398572:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:401514-405050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:406047-406136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:406281-406420:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:407076-407232:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:408085-408264:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:408470-408595:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:409500-409603:1:exon

TPR
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(408050..454746)
location: region:408050-454746:-1
so has part: feature:408050-454746:-1:exon
subclass of: SO_0000010

100549783
type: Gene
SIO_000068: ncbigene

position:408050:-1
position: 408050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454746:-1
position: 454746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:408050-454746:-1:exon

TPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TPR
product: translocated promoter region, nuclear basket protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 146 samples with support for all annotated introns
transcript id: XM_010715532.3
SIO_010081: TPR
subclass of: SO_0000673
so part of: TPR
location: complement(join(408050..409847,410693..410791,411340..411458,412754..412910,413080..413175,414905..415011,415690..415784,416625..416693,417528..417712,418167..418257,422221..422352,423739..423939,425595..425678,426522..426664,427458..427730,428027..428235,429227..429288,429983..430188,430816..431014,431177..431323,431667..431877,432214..432344,433194..433325,434007..434144,434532..434679,435090..435274,435359..435562,436355..436471,437164..437316,438570..438736,439226..439394,439529..439669,440377..440511,440938..441100,441419..441567,441685..441824,442188..442351,443705..443931,444475..444582,445120..445317,446146..446237,446984..447124,447617..447704,448806..448886,448996..449088,449814..449978,450625..450728,451116..451212,452589..452662,452988..453092,454573..454746))
location: region:408050-454746:-1
so has part: feature:454573-454746:-1:exon
so has part: feature:452988-453092:-1:exon
so has part: feature:452589-452662:-1:exon
so has part: feature:451116-451212:-1:exon
so has part: feature:450625-450728:-1:exon
so has part: feature:449814-449978:-1:exon
so has part: feature:448996-449088:-1:exon
so has part: feature:448806-448886:-1:exon
so has part: feature:447617-447704:-1:exon
so has part: feature:446984-447124:-1:exon
so has part: feature:446146-446237:-1:exon
so has part: feature:445120-445317:-1:exon
so has part: feature:444475-444582:-1:exon
so has part: feature:443705-443931:-1:exon
so has part: feature:442188-442351:-1:exon
so has part: feature:441685-441824:-1:exon
so has part: feature:441419-441567:-1:exon
so has part: feature:440938-441100:-1:exon
so has part: feature:440377-440511:-1:exon
so has part: feature:439529-439669:-1:exon
so has part: feature:439226-439394:-1:exon
so has part: feature:438570-438736:-1:exon
so has part: feature:437164-437316:-1:exon
so has part: feature:436355-436471:-1:exon
so has part: feature:435359-435562:-1:exon
so has part: feature:435090-435274:-1:exon
so has part: feature:434532-434679:-1:exon
so has part: feature:434007-434144:-1:exon
so has part: feature:433194-433325:-1:exon
so has part: feature:432214-432344:-1:exon
so has part: feature:431667-431877:-1:exon
so has part: feature:431177-431323:-1:exon
so has part: feature:430816-431014:-1:exon
so has part: feature:429983-430188:-1:exon
so has part: feature:429227-429288:-1:exon
so has part: feature:428027-428235:-1:exon
so has part: feature:427458-427730:-1:exon
so has part: feature:426522-426664:-1:exon
so has part: feature:425595-425678:-1:exon
so has part: feature:423739-423939:-1:exon
so has part: feature:422221-422352:-1:exon
so has part: feature:418167-418257:-1:exon
so has part: feature:417528-417712:-1:exon
so has part: feature:416625-416693:-1:exon
so has part: feature:415690-415784:-1:exon
so has part: feature:414905-415011:-1:exon
so has part: feature:413080-413175:-1:exon
so has part: feature:412754-412910:-1:exon
so has part: feature:411340-411458:-1:exon
so has part: feature:410693-410791:-1:exon
so has part: feature:408050-409847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:454573-454746:-1:exon

position:454573:-1
position: 454573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:452988-453092:-1:exon

position:452988:-1
position: 452988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453092:-1
position: 453092
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:452589-452662:-1:exon

position:452589:-1
position: 452589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452662:-1
position: 452662
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:451116-451212:-1:exon

position:451116:-1
position: 451116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:451212:-1
position: 451212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:450625-450728:-1:exon

position:450625:-1
position: 450625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:450728:-1
position: 450728
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:449814-449978:-1:exon

position:449814:-1
position: 449814
reference: sequence
type: ReverseStrandPosition
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position:449978:-1
position: 449978
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:448996-449088:-1:exon

position:448996:-1
position: 448996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449088:-1
position: 449088
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:448806-448886:-1:exon

position:448806:-1
position: 448806
reference: sequence
type: ReverseStrandPosition
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position:448886:-1
position: 448886
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:447617-447704:-1:exon

position:447617:-1
position: 447617
reference: sequence
type: ReverseStrandPosition
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position:447704:-1
position: 447704
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:446984-447124:-1:exon

position:446984:-1
position: 446984
reference: sequence
type: ReverseStrandPosition
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position:447124:-1
position: 447124
reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:446146-446237:-1:exon

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position: 446146
reference: sequence
type: ReverseStrandPosition
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position:446237:-1
position: 446237
reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:445120-445317:-1:exon

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position: 445120
reference: sequence
type: ReverseStrandPosition
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position:445317:-1
position: 445317
reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:444475-444582:-1:exon

position:444475:-1
position: 444475
reference: sequence
type: ReverseStrandPosition
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position:444582:-1
position: 444582
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:443705-443931:-1:exon

position:443705:-1
position: 443705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:443931:-1
position: 443931
reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:442188-442351:-1:exon

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position: 442188
reference: sequence
type: ReverseStrandPosition
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position:442351:-1
position: 442351
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:441685-441824:-1:exon

position:441685:-1
position: 441685
reference: sequence
type: ReverseStrandPosition
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position:441824:-1
position: 441824
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:441419-441567:-1:exon

position:441419:-1
position: 441419
reference: sequence
type: ReverseStrandPosition
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position:441567:-1
position: 441567
reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:440938-441100:-1:exon

position:440938:-1
position: 440938
reference: sequence
type: ReverseStrandPosition
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position:441100:-1
position: 441100
reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:440377-440511:-1:exon

position:440377:-1
position: 440377
reference: sequence
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position:440511:-1
position: 440511
reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:439529-439669:-1:exon

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position: 439529
reference: sequence
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position:439669:-1
position: 439669
reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:439226-439394:-1:exon

position:439226:-1
position: 439226
reference: sequence
type: ReverseStrandPosition
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position:439394:-1
position: 439394
reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:438570-438736:-1:exon

position:438570:-1
position: 438570
reference: sequence
type: ReverseStrandPosition
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position:438736:-1
position: 438736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:437164-437316:-1:exon

position:437164:-1
position: 437164
reference: sequence
type: ReverseStrandPosition
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position:437316:-1
position: 437316
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:436355-436471:-1:exon

position:436355:-1
position: 436355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:436471:-1
position: 436471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:435359-435562:-1:exon

position:435359:-1
position: 435359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435562:-1
position: 435562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:435090-435274:-1:exon

position:435090:-1
position: 435090
reference: sequence
type: ReverseStrandPosition
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position:435274:-1
position: 435274
reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:434532-434679:-1:exon

position:434532:-1
position: 434532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:434679:-1
position: 434679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:434007-434144:-1:exon

position:434007:-1
position: 434007
reference: sequence
type: ReverseStrandPosition
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position:434144:-1
position: 434144
reference: sequence
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type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:433194-433325:-1:exon

position:433194:-1
position: 433194
reference: sequence
type: ReverseStrandPosition
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position:433325:-1
position: 433325
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:432214-432344:-1:exon

position:432214:-1
position: 432214
reference: sequence
type: ReverseStrandPosition
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position:432344:-1
position: 432344
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 31
SIO_000628: feature:431667-431877:-1:exon

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position: 431667
reference: sequence
type: ReverseStrandPosition
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position:431877:-1
position: 431877
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:431177-431323:-1:exon

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position: 431177
reference: sequence
type: ReverseStrandPosition
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position:431323:-1
position: 431323
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 33
SIO_000628: feature:430816-431014:-1:exon

position:430816:-1
position: 430816
reference: sequence
type: ReverseStrandPosition
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position:431014:-1
position: 431014
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 34
SIO_000628: feature:429983-430188:-1:exon

position:429983:-1
position: 429983
reference: sequence
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position:430188:-1
position: 430188
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 35
SIO_000628: feature:429227-429288:-1:exon

position:429227:-1
position: 429227
reference: sequence
type: ReverseStrandPosition
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position:429288:-1
position: 429288
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 36
SIO_000628: feature:428027-428235:-1:exon

position:428027:-1
position: 428027
reference: sequence
type: ReverseStrandPosition
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position:428235:-1
position: 428235
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 37
SIO_000628: feature:427458-427730:-1:exon

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position: 427458
reference: sequence
type: ReverseStrandPosition
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position:427730:-1
position: 427730
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 38
SIO_000628: feature:426522-426664:-1:exon

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position: 426522
reference: sequence
type: ReverseStrandPosition
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position:426664:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 39
SIO_000628: feature:425595-425678:-1:exon

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position: 425595
reference: sequence
type: ReverseStrandPosition
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position:425678:-1
position: 425678
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 40
SIO_000628: feature:423739-423939:-1:exon

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position: 423739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:423939:-1
position: 423939
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 41
SIO_000628: feature:422221-422352:-1:exon

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position: 422221
reference: sequence
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position:422352:-1
position: 422352
reference: sequence
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urn:…
SIO_000300: 42
SIO_000628: feature:418167-418257:-1:exon

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position: 418167
reference: sequence
type: ReverseStrandPosition
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position:418257:-1
position: 418257
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 43
SIO_000628: feature:417528-417712:-1:exon

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position: 417528
reference: sequence
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position:417712:-1
position: 417712
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 44
SIO_000628: feature:416625-416693:-1:exon

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position: 416625
reference: sequence
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position:416693:-1
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reference: sequence
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urn:…
SIO_000300: 45
SIO_000628: feature:415690-415784:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:415784:-1
position: 415784
reference: sequence
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urn:…
SIO_000300: 46
SIO_000628: feature:414905-415011:-1:exon

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reference: sequence
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position:415011:-1
position: 415011
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 47
SIO_000628: feature:413080-413175:-1:exon

position:413080:-1
position: 413080
reference: sequence
type: ReverseStrandPosition
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position:413175:-1
position: 413175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:412754-412910:-1:exon

position:412754:-1
position: 412754
reference: sequence
type: ReverseStrandPosition
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position:412910:-1
position: 412910
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 49
SIO_000628: feature:411340-411458:-1:exon

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position: 411340
reference: sequence
type: ReverseStrandPosition
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position:411458:-1
position: 411458
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 50
SIO_000628: feature:410693-410791:-1:exon

position:410693:-1
position: 410693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:410791:-1
position: 410791
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 51
SIO_000628: feature:408050-409847:-1:exon

position:409847:-1
position: 409847
reference: sequence
type: ReverseStrandPosition
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TPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TPR
product: translocated promoter region, nuclear basket protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 128 samples with support for all annotated introns
transcript id: XM_010715531.3
SIO_010081: TPR
subclass of: SO_0000673
so part of: TPR
location: complement(join(408050..409847,410693..410791,411340..411458,412754..412910,413080..413175,414905..415011,415690..415781,416625..416693,417528..417712,418167..418257,422221..422352,423739..423939,425595..425678,426522..426670,427458..427730,428027..428235,429227..429288,429983..430188,430816..431014,431177..431323,431667..431877,432214..432344,433194..433325,434007..434144,434532..434679,435090..435274,435359..435562,436355..436471,437164..437316,438570..438736,439226..439394,439529..439669,440377..440511,440938..441100,441419..441567,441685..441824,442188..442351,443705..443931,444475..444582,445120..445317,446146..446237,446984..447124,447617..447704,448806..448886,448996..449088,449814..449978,450625..450728,451116..451212,452589..452662,452988..453092,454573..454746))
location: region:408050-454746:-1
so has part: feature:454573-454746:-1:exon
so has part: feature:452988-453092:-1:exon
so has part: feature:452589-452662:-1:exon
so has part: feature:451116-451212:-1:exon
so has part: feature:450625-450728:-1:exon
so has part: feature:449814-449978:-1:exon
so has part: feature:448996-449088:-1:exon
so has part: feature:448806-448886:-1:exon
so has part: feature:447617-447704:-1:exon
so has part: feature:446984-447124:-1:exon
so has part: feature:446146-446237:-1:exon
so has part: feature:445120-445317:-1:exon
so has part: feature:444475-444582:-1:exon
so has part: feature:443705-443931:-1:exon
so has part: feature:442188-442351:-1:exon
so has part: feature:441685-441824:-1:exon
so has part: feature:441419-441567:-1:exon
so has part: feature:440938-441100:-1:exon
so has part: feature:440377-440511:-1:exon
so has part: feature:439529-439669:-1:exon
so has part: feature:439226-439394:-1:exon
so has part: feature:438570-438736:-1:exon
so has part: feature:437164-437316:-1:exon
so has part: feature:436355-436471:-1:exon
so has part: feature:435359-435562:-1:exon
so has part: feature:435090-435274:-1:exon
so has part: feature:434532-434679:-1:exon
so has part: feature:434007-434144:-1:exon
so has part: feature:433194-433325:-1:exon
so has part: feature:432214-432344:-1:exon
so has part: feature:431667-431877:-1:exon
so has part: feature:431177-431323:-1:exon
so has part: feature:430816-431014:-1:exon
so has part: feature:429983-430188:-1:exon
so has part: feature:429227-429288:-1:exon
so has part: feature:428027-428235:-1:exon
so has part: feature:427458-427730:-1:exon
so has part: feature:426522-426670:-1:exon
so has part: feature:425595-425678:-1:exon
so has part: feature:423739-423939:-1:exon
so has part: feature:422221-422352:-1:exon
so has part: feature:418167-418257:-1:exon
so has part: feature:417528-417712:-1:exon
so has part: feature:416625-416693:-1:exon
so has part: feature:415690-415781:-1:exon
so has part: feature:414905-415011:-1:exon
so has part: feature:413080-413175:-1:exon
so has part: feature:412754-412910:-1:exon
so has part: feature:411340-411458:-1:exon
so has part: feature:410693-410791:-1:exon
so has part: feature:408050-409847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:454573-454746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:452988-453092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452589-452662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451116-451212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450625-450728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449814-449978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448996-449088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448806-448886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447617-447704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446984-447124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446146-446237:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:445120-445317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444475-444582:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:443705-443931:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:442188-442351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441685-441824:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:441419-441567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:440938-441100:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:440377-440511:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:439529-439669:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:439226-439394:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:438570-438736:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:437164-437316:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:436355-436471:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:435359-435562:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:435090-435274:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:434532-434679:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:434007-434144:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:433194-433325:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:432214-432344:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:431667-431877:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:431177-431323:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:430816-431014:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:429983-430188:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:429227-429288:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:428027-428235:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:427458-427730:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:426522-426670:-1:exon

position:426670:-1
position: 426670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:425595-425678:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:423739-423939:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:422221-422352:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:418167-418257:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:417528-417712:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:416625-416693:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:415690-415781:-1:exon

position:415781:-1
position: 415781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:414905-415011:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:413080-413175:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:412754-412910:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:411340-411458:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:410693-410791:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:408050-409847:-1:exon

TPR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TPR
product: translocated promoter region, nuclear basket protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 150 samples with support for all annotated introns
transcript id: XM_010715529.3
SIO_010081: TPR
subclass of: SO_0000673
so part of: TPR
location: complement(join(408050..409847,410693..410791,411340..411458,412754..412910,413080..413175,414905..415011,415690..415784,416625..416693,417528..417712,418167..418257,422221..422352,423739..423939,425595..425678,426522..426670,427458..427730,428027..428235,429227..429288,429983..430188,430816..431014,431177..431323,431667..431877,432214..432344,433194..433325,434007..434144,434532..434679,435090..435274,435359..435562,436355..436471,437164..437316,438570..438736,439226..439394,439529..439669,440377..440511,440938..441100,441419..441567,441685..441824,442188..442351,443705..443931,444475..444582,445120..445317,446146..446237,446984..447124,447617..447704,448806..448886,448996..449088,449814..449978,450625..450728,451116..451212,452589..452662,452988..453092,454573..454746))
location: region:408050-454746:-1
so has part: feature:454573-454746:-1:exon
so has part: feature:452988-453092:-1:exon
so has part: feature:452589-452662:-1:exon
so has part: feature:451116-451212:-1:exon
so has part: feature:450625-450728:-1:exon
so has part: feature:449814-449978:-1:exon
so has part: feature:448996-449088:-1:exon
so has part: feature:448806-448886:-1:exon
so has part: feature:447617-447704:-1:exon
so has part: feature:446984-447124:-1:exon
so has part: feature:446146-446237:-1:exon
so has part: feature:445120-445317:-1:exon
so has part: feature:444475-444582:-1:exon
so has part: feature:443705-443931:-1:exon
so has part: feature:442188-442351:-1:exon
so has part: feature:441685-441824:-1:exon
so has part: feature:441419-441567:-1:exon
so has part: feature:440938-441100:-1:exon
so has part: feature:440377-440511:-1:exon
so has part: feature:439529-439669:-1:exon
so has part: feature:439226-439394:-1:exon
so has part: feature:438570-438736:-1:exon
so has part: feature:437164-437316:-1:exon
so has part: feature:436355-436471:-1:exon
so has part: feature:435359-435562:-1:exon
so has part: feature:435090-435274:-1:exon
so has part: feature:434532-434679:-1:exon
so has part: feature:434007-434144:-1:exon
so has part: feature:433194-433325:-1:exon
so has part: feature:432214-432344:-1:exon
so has part: feature:431667-431877:-1:exon
so has part: feature:431177-431323:-1:exon
so has part: feature:430816-431014:-1:exon
so has part: feature:429983-430188:-1:exon
so has part: feature:429227-429288:-1:exon
so has part: feature:428027-428235:-1:exon
so has part: feature:427458-427730:-1:exon
so has part: feature:426522-426670:-1:exon
so has part: feature:425595-425678:-1:exon
so has part: feature:423739-423939:-1:exon
so has part: feature:422221-422352:-1:exon
so has part: feature:418167-418257:-1:exon
so has part: feature:417528-417712:-1:exon
so has part: feature:416625-416693:-1:exon
so has part: feature:415690-415784:-1:exon
so has part: feature:414905-415011:-1:exon
so has part: feature:413080-413175:-1:exon
so has part: feature:412754-412910:-1:exon
so has part: feature:411340-411458:-1:exon
so has part: feature:410693-410791:-1:exon
so has part: feature:408050-409847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:454573-454746:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:452988-453092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452589-452662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451116-451212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450625-450728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449814-449978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448996-449088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448806-448886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447617-447704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446984-447124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446146-446237:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:445120-445317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444475-444582:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:443705-443931:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:442188-442351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441685-441824:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:441419-441567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:440938-441100:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:440377-440511:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:439529-439669:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:439226-439394:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:438570-438736:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:437164-437316:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:436355-436471:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:435359-435562:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:435090-435274:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:434532-434679:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:434007-434144:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:433194-433325:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:432214-432344:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:431667-431877:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:431177-431323:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:430816-431014:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:429983-430188:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:429227-429288:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:428027-428235:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:427458-427730:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:426522-426670:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:425595-425678:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:423739-423939:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:422221-422352:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:418167-418257:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:417528-417712:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:416625-416693:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:415690-415784:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:414905-415011:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:413080-413175:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:412754-412910:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:411340-411458:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:410693-410791:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:408050-409847:-1:exon

TPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoprotein TPR isoform X3
translation: MAAVLQQVLERAELAKLSKPVQGKLERFLADQQSEIDGLRARHERFKVDSEQQYFEVEKRLAQSQERLVNETQECQTLREELKKLHEQLKLLNEKNKELEAAQDRNAAIQSHLSREKEELEAEKRDLVRTSERRSQEVEHLNEDVKRLNEKLTEANTEKVKLQLKLDELQTSDVTVKYREKRLEQEKELLQSQNTWLNSELKAKTDELLHTAREKGSEILELKCNLENKKEEVSRMEEQVNSLKQSNENLQKHVEDLLNKLKEAKEQQAGMEERFHNELNAHIKLSNLYKSAADDSEAKSNELTGAVEELHKLLKEAGEANKATQEHLAELEEAKTVMEKELREKISKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIQRLQEDADKANKQTSMLERENQRLEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGEAREKEEQETTSSKISELQSQLDEALNELEKLRESRHHQLQLVESIVRQRDMFRILLAQTTGAIIPLQASGILPEEISLTSTPKRSSIPQAMSTPAPVSMSESVETAEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTELRSQNAKISTQLEFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKDILKMSDVRLTQQRESLLVEQRGQNLLLTNLRTIQGILERSETETKQRLNNQVEKLEREISQLKKKLESEVEQRHALTKNQEVHILDLKRQLETETNRHIHTKELLKNAQKETTVLKQQLNNTEAQLASQSSQRAPGKGQPGTSEDVDDLVSRLRQADEQVNDLRERLKTSSSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEARLKESSEYQAQLEKKLMESEKEKQELQEEKRKAVENMEQQLSELKKSLSALQSEVQEALQRASVALSNEQQARRDCQEQAKMASEAQNKYERELMLHAADVEALQAIKEQVAKNTAIKQQLEEAAQKAESTLLECKASWEERERMMKDEASTLASRCEDLEKQNRLLHEQLESLSDKMVTSMKEAMPAALNVSLNEEGKSQEQILEILKFIRREKEIAETRFEVAQVESLRFRQRVEHLERELQEVQDSLNAEREKVQVTAKTIAQHEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADILPLQESNAELSEKSGMLQAEKKLLEEDVKRWKTRTQHLLSQQKDTDLEEYRKLLSEKEANTKRIQQMSEETGRLKAEIARTNASLTTSQNLLQNLKDEVAKIRTEKETLQKELDVKVADIQEKVKTITQVKKIGRRYKTQYEELKAQHDKMVAEAATQSLVEQQEEQVSVQEVQELKDSLSQSEVKTKTLENQVENLQKTITEKETEARNLQEQISQLQSELARFRQDLQEKTTQEEQLRQQISEKEEKTRKTFLAAKQKIAQLAGTKEQLTKENEEWKQKSNSLEEQKTELEVRMSALKSQYEGRICRLERELREQQERHHEQRDEPAESTNKVPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVSTPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIEPANQEPSPTIVEVVQSSQIERPSTSTAVFGTATPSSSLSKRPREEEEDNTVENSDQISEETVDVPLPKKLRSIQRVGPEEEVTAEESTDGEVETQTYNQDSQDSIGEGVTQGEYAPMEDSEETSQSIPIDLGPLQSDQQNTTSSQDGQSKRDDVIVIDSDDEEDDDDENEGEQEDYEDEEEEDEDDDEDTGMGDEGDDSNEGTGSADGN…
SIO_010081: TPR
subclass of: SO_0000673
so part of: TPR
location: complement(join(409792..409847,410693..410791,411340..411458,412754..412910,413080..413175,414905..415011,415690..415784,416625..416693,417528..417712,418167..418257,422221..422352,423739..423939,425595..425678,426522..426664,427458..427730,428027..428235,429227..429288,429983..430188,430816..431014,431177..431323,431667..431877,432214..432344,433194..433325,434007..434144,434532..434679,435090..435274,435359..435562,436355..436471,437164..437316,438570..438736,439226..439394,439529..439669,440377..440511,440938..441100,441419..441567,441685..441824,442188..442351,443705..443931,444475..444582,445120..445317,446146..446237,446984..447124,447617..447704,448806..448886,448996..449088,449814..449978,450625..450728,451116..451212,452589..452662,452988..453092,454573..454723))
location: region:409792-454723:-1
so has part: feature:454573-454723:-1:exon
so has part: feature:452988-453092:-1:exon
so has part: feature:452589-452662:-1:exon
so has part: feature:451116-451212:-1:exon
so has part: feature:450625-450728:-1:exon
so has part: feature:449814-449978:-1:exon
so has part: feature:448996-449088:-1:exon
so has part: feature:448806-448886:-1:exon
so has part: feature:447617-447704:-1:exon
so has part: feature:446984-447124:-1:exon
so has part: feature:446146-446237:-1:exon
so has part: feature:445120-445317:-1:exon
so has part: feature:444475-444582:-1:exon
so has part: feature:443705-443931:-1:exon
so has part: feature:442188-442351:-1:exon
so has part: feature:441685-441824:-1:exon
so has part: feature:441419-441567:-1:exon
so has part: feature:440938-441100:-1:exon
so has part: feature:440377-440511:-1:exon
so has part: feature:439529-439669:-1:exon
so has part: feature:439226-439394:-1:exon
so has part: feature:438570-438736:-1:exon
so has part: feature:437164-437316:-1:exon
so has part: feature:436355-436471:-1:exon
so has part: feature:435359-435562:-1:exon
so has part: feature:435090-435274:-1:exon
so has part: feature:434532-434679:-1:exon
so has part: feature:434007-434144:-1:exon
so has part: feature:433194-433325:-1:exon
so has part: feature:432214-432344:-1:exon
so has part: feature:431667-431877:-1:exon
so has part: feature:431177-431323:-1:exon
so has part: feature:430816-431014:-1:exon
so has part: feature:429983-430188:-1:exon
so has part: feature:429227-429288:-1:exon
so has part: feature:428027-428235:-1:exon
so has part: feature:427458-427730:-1:exon
so has part: feature:426522-426664:-1:exon
so has part: feature:425595-425678:-1:exon
so has part: feature:423739-423939:-1:exon
so has part: feature:422221-422352:-1:exon
so has part: feature:418167-418257:-1:exon
so has part: feature:417528-417712:-1:exon
so has part: feature:416625-416693:-1:exon
so has part: feature:415690-415784:-1:exon
so has part: feature:414905-415011:-1:exon
so has part: feature:413080-413175:-1:exon
so has part: feature:412754-412910:-1:exon
so has part: feature:411340-411458:-1:exon
so has part: feature:410693-410791:-1:exon
so has part: feature:409792-409847:-1:exon

XP_010713834.1
type: Protein
SIO_000068: ncbiprotein

position:409792:-1
position: 409792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454723:-1
position: 454723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:454573-454723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:452988-453092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452589-452662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451116-451212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450625-450728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449814-449978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448996-449088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448806-448886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447617-447704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446984-447124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446146-446237:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:445120-445317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444475-444582:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:443705-443931:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:442188-442351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441685-441824:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:441419-441567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:440938-441100:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:440377-440511:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:439529-439669:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:439226-439394:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:438570-438736:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:437164-437316:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:436355-436471:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:435359-435562:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:435090-435274:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:434532-434679:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:434007-434144:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:433194-433325:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:432214-432344:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:431667-431877:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:431177-431323:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:430816-431014:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:429983-430188:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:429227-429288:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:428027-428235:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:427458-427730:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:426522-426664:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:425595-425678:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:423739-423939:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:422221-422352:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:418167-418257:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:417528-417712:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:416625-416693:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:415690-415784:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:414905-415011:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:413080-413175:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:412754-412910:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:411340-411458:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:410693-410791:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:409792-409847:-1:exon

TPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoprotein TPR isoform X2
translation: MAAVLQQVLERAELAKLSKPVQGKLERFLADQQSEIDGLRARHERFKVDSEQQYFEVEKRLAQSQERLVNETQECQTLREELKKLHEQLKLLNEKNKELEAAQDRNAAIQSHLSREKEELEAEKRDLVRTSERRSQEVEHLNEDVKRLNEKLTEANTEKVKLQLKLDELQTSDVTVKYREKRLEQEKELLQSQNTWLNSELKAKTDELLHTAREKGSEILELKCNLENKKEEVSRMEEQVNSLKQSNENLQKHVEDLLNKLKEAKEQQAGMEERFHNELNAHIKLSNLYKSAADDSEAKSNELTGAVEELHKLLKEAGEANKATQEHLAELEEAKTVMEKELREKISKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIQRLQEDADKANKQTSMLERENQRLEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGEAREKEEQETTSSKISELQSQLDEALNELEKLRESRHHQLQLVESIVRQRDMFRILLAQTTGAIIPLQASGILPEEISLTSTPKRSSIPQAMSTPAPVSMSESVETAEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTELRSQNAKISTQLEFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKDILKMSDVRLTQQRESLLVEQRGQNLLLTNLRTIQGILERSETETKQRLNNQVEKLEREISQLKKKLESEVEQRHALTKNQEVHILDLKRQLETETNRHIHTKELLKNAQKETTVLKQQLNNTEAQLASQSSQRAPGKGQPGTSEDVDDLVSRLRQADEQVNDLRERLKTSSSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEARLKESSEYQAQLEKKLMESEKEKQELQEEKRKAVENMEQQLSELKKSLSALQSEVQEALQRASVALSNEQQARRDCQEQAKMASEAQNKYERELMLHAADVEALQAIKEQVAKNTAIKQQLEEAAQKAESTLLECKASWEERERMMKDEASTLASRCEDLEKQNRLLHEQLESLSDKMVTSMKEAMPAALNVSLNEEGKSQEQILEILKFIRREKEIAETRFEVAQVESLRFRQRVEHLERELQEVQDSLNAEREKVQVTAKTIAQHEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADILPLQESNAELSEKSGMLQAEKKLLEEDVKRWKTRTQHLLSQQKDTDLEEYRKLLSEKEANTKRIQQMSEETGRLKAEIARTNASLTTSQNLLQNLKDEVAKIRTEKETLQKELDVKVADIQEKVKTITQVKKIGRRYKTQYEELKAQHDKMVAEAATQSLVEQQEEQVSVQEVQELKDSLSQSEVKTKTLENQVENLQKTITEKETEARNLQEQISQLQSELARFRQDLQEKTTQEEQLRQQISEKEEKTRKTFLAAKQKIAQLAGTKEQLTKENEEWKQKSNSLEEQKTELEVRMSALKSQYEGRICRLERELREQQERHHEQRDEPAESTNKVPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVSTPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIEPANQEPSPTIVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRPREEEEDNTVENSDQISEETVDVPLPKKLRSIQRVGPEEEVTAEESTDGEVETQTYNQDSQDSIGEGVTQGEYAPMEDSEETSQSIPIDLGPLQSDQQNTTSSQDGQSKRDDVIVIDSDDEEDDDDENEGEQEDYEDEEEEDEDDDEDTGMGDEGDDSNEGTGSAD…
SIO_010081: TPR
subclass of: SO_0000673
so part of: TPR
location: complement(join(409792..409847,410693..410791,411340..411458,412754..412910,413080..413175,414905..415011,415690..415781,416625..416693,417528..417712,418167..418257,422221..422352,423739..423939,425595..425678,426522..426670,427458..427730,428027..428235,429227..429288,429983..430188,430816..431014,431177..431323,431667..431877,432214..432344,433194..433325,434007..434144,434532..434679,435090..435274,435359..435562,436355..436471,437164..437316,438570..438736,439226..439394,439529..439669,440377..440511,440938..441100,441419..441567,441685..441824,442188..442351,443705..443931,444475..444582,445120..445317,446146..446237,446984..447124,447617..447704,448806..448886,448996..449088,449814..449978,450625..450728,451116..451212,452589..452662,452988..453092,454573..454723))
location: region:409792-454723:-1
so has part: feature:454573-454723:-1:exon
so has part: feature:452988-453092:-1:exon
so has part: feature:452589-452662:-1:exon
so has part: feature:451116-451212:-1:exon
so has part: feature:450625-450728:-1:exon
so has part: feature:449814-449978:-1:exon
so has part: feature:448996-449088:-1:exon
so has part: feature:448806-448886:-1:exon
so has part: feature:447617-447704:-1:exon
so has part: feature:446984-447124:-1:exon
so has part: feature:446146-446237:-1:exon
so has part: feature:445120-445317:-1:exon
so has part: feature:444475-444582:-1:exon
so has part: feature:443705-443931:-1:exon
so has part: feature:442188-442351:-1:exon
so has part: feature:441685-441824:-1:exon
so has part: feature:441419-441567:-1:exon
so has part: feature:440938-441100:-1:exon
so has part: feature:440377-440511:-1:exon
so has part: feature:439529-439669:-1:exon
so has part: feature:439226-439394:-1:exon
so has part: feature:438570-438736:-1:exon
so has part: feature:437164-437316:-1:exon
so has part: feature:436355-436471:-1:exon
so has part: feature:435359-435562:-1:exon
so has part: feature:435090-435274:-1:exon
so has part: feature:434532-434679:-1:exon
so has part: feature:434007-434144:-1:exon
so has part: feature:433194-433325:-1:exon
so has part: feature:432214-432344:-1:exon
so has part: feature:431667-431877:-1:exon
so has part: feature:431177-431323:-1:exon
so has part: feature:430816-431014:-1:exon
so has part: feature:429983-430188:-1:exon
so has part: feature:429227-429288:-1:exon
so has part: feature:428027-428235:-1:exon
so has part: feature:427458-427730:-1:exon
so has part: feature:426522-426670:-1:exon
so has part: feature:425595-425678:-1:exon
so has part: feature:423739-423939:-1:exon
so has part: feature:422221-422352:-1:exon
so has part: feature:418167-418257:-1:exon
so has part: feature:417528-417712:-1:exon
so has part: feature:416625-416693:-1:exon
so has part: feature:415690-415781:-1:exon
so has part: feature:414905-415011:-1:exon
so has part: feature:413080-413175:-1:exon
so has part: feature:412754-412910:-1:exon
so has part: feature:411340-411458:-1:exon
so has part: feature:410693-410791:-1:exon
so has part: feature:409792-409847:-1:exon

XP_010713833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454573-454723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:452988-453092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452589-452662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451116-451212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450625-450728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449814-449978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448996-449088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448806-448886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447617-447704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446984-447124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446146-446237:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:445120-445317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444475-444582:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:443705-443931:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:442188-442351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441685-441824:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:441419-441567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:440938-441100:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:440377-440511:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:439529-439669:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:439226-439394:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:438570-438736:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:437164-437316:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:436355-436471:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:435359-435562:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:435090-435274:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:434532-434679:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:434007-434144:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:433194-433325:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:432214-432344:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:431667-431877:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:431177-431323:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:430816-431014:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:429983-430188:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:429227-429288:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:428027-428235:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:427458-427730:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:426522-426670:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:425595-425678:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:423739-423939:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:422221-422352:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:418167-418257:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:417528-417712:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:416625-416693:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:415690-415781:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:414905-415011:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:413080-413175:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:412754-412910:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:411340-411458:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:410693-410791:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:409792-409847:-1:exon

TPR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoprotein TPR isoform X1
translation: MAAVLQQVLERAELAKLSKPVQGKLERFLADQQSEIDGLRARHERFKVDSEQQYFEVEKRLAQSQERLVNETQECQTLREELKKLHEQLKLLNEKNKELEAAQDRNAAIQSHLSREKEELEAEKRDLVRTSERRSQEVEHLNEDVKRLNEKLTEANTEKVKLQLKLDELQTSDVTVKYREKRLEQEKELLQSQNTWLNSELKAKTDELLHTAREKGSEILELKCNLENKKEEVSRMEEQVNSLKQSNENLQKHVEDLLNKLKEAKEQQAGMEERFHNELNAHIKLSNLYKSAADDSEAKSNELTGAVEELHKLLKEAGEANKATQEHLAELEEAKTVMEKELREKISKLEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKVVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVQEVEAKAPILKRQREEFERSQKAVASLSAKLEQAMKEIQRLQEDADKANKQTSMLERENQRLEIQVKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQQNQRLLVALRELGEAREKEEQETTSSKISELQSQLDEALNELEKLRESRHHQLQLVESIVRQRDMFRILLAQTTGAIIPLQASGILPEEISLTSTPKRSSIPQAMSTPAPVSMSESVETAEAKAALKQLQEVFENYKKEKAENDKLLNEQNEKLQEQVTELRSQNAKISTQLEFASKRYEMLQDNVEGYRREITSLHERTQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEKDILKMSDVRLTQQRESLLVEQRGQNLLLTNLRTIQGILERSETETKQRLNNQVEKLEREISQLKKKLESEVEQRHALTKNQEVHILDLKRQLETETNRHIHTKELLKNAQKETTVLKQQLNNTEAQLASQSSQRAPGKGQPGTSEDVDDLVSRLRQADEQVNDLRERLKTSSSNVEQYRAMVLSLEESLNKEKQVTEEVRATVEARLKESSEYQAQLEKKLMESEKEKQELQEEKRKAVENMEQQLSELKKSLSALQSEVQEALQRASVALSNEQQARRDCQEQAKMASEAQNKYERELMLHAADVEALQAIKEQVAKNTAIKQQLEEAAQKAESTLLECKASWEERERMMKDEASTLASRCEDLEKQNRLLHEQLESLSDKMVTSMKEAMPAALNVSLNEEGKSQEQILEILKFIRREKEIAETRFEVAQVESLRFRQRVEHLERELQEVQDSLNAEREKVQVTAKTIAQHEELMKKTETMNVLIETNKMLREEKERLEQELQQMQAKVRKLEADILPLQESNAELSEKSGMLQAEKKLLEEDVKRWKTRTQHLLSQQKDTDLEEYRKLLSEKEANTKRIQQMSEETGRLKAEIARTNASLTTSQNLLQNLKDEVAKIRTEKETLQKELDVKVADIQEKVKTITQVKKIGRRYKTQYEELKAQHDKMVAEAATQSLVEQQEEQVSVQEVQELKDSLSQSEVKTKTLENQVENLQKTITEKETEARNLQEQISQLQSELARFRQDLQEKTTQEEQLRQQISEKEEKTRKTFLAAKQKIAQLAGTKEQLTKENEEWKQKSNSLEEQKTELEVRMSALKSQYEGRICRLERELREQQERHHEQRDEPAESTNKVPEQQRQISLKSTPASGERGIASTSDPPTANIKPTPVVSTPSKVTAAAIAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVETQEAMQSEGPVEHVPVFGSTSGSVRSTSPNVQTSLSQPILTVQQQTQATAFVQPTQQSHPQIEPANQEPSPTIVEVVQSSQIERPSTSTAVFGTVSATPSSSLSKRPREEEEDNTVENSDQISEETVDVPLPKKLRSIQRVGPEEEVTAEESTDGEVETQTYNQDSQDSIGEGVTQGEYAPMEDSEETSQSIPIDLGPLQSDQQNTTSSQDGQSKRDDVIVIDSDDEEDDDDENEGEQEDYEDEEEEDEDDDEDTGMGDEGDDSNEGTGSAD…
SIO_010081: TPR
subclass of: SO_0000673
so part of: TPR
location: complement(join(409792..409847,410693..410791,411340..411458,412754..412910,413080..413175,414905..415011,415690..415784,416625..416693,417528..417712,418167..418257,422221..422352,423739..423939,425595..425678,426522..426670,427458..427730,428027..428235,429227..429288,429983..430188,430816..431014,431177..431323,431667..431877,432214..432344,433194..433325,434007..434144,434532..434679,435090..435274,435359..435562,436355..436471,437164..437316,438570..438736,439226..439394,439529..439669,440377..440511,440938..441100,441419..441567,441685..441824,442188..442351,443705..443931,444475..444582,445120..445317,446146..446237,446984..447124,447617..447704,448806..448886,448996..449088,449814..449978,450625..450728,451116..451212,452589..452662,452988..453092,454573..454723))
location: region:409792-454723:-1
so has part: feature:454573-454723:-1:exon
so has part: feature:452988-453092:-1:exon
so has part: feature:452589-452662:-1:exon
so has part: feature:451116-451212:-1:exon
so has part: feature:450625-450728:-1:exon
so has part: feature:449814-449978:-1:exon
so has part: feature:448996-449088:-1:exon
so has part: feature:448806-448886:-1:exon
so has part: feature:447617-447704:-1:exon
so has part: feature:446984-447124:-1:exon
so has part: feature:446146-446237:-1:exon
so has part: feature:445120-445317:-1:exon
so has part: feature:444475-444582:-1:exon
so has part: feature:443705-443931:-1:exon
so has part: feature:442188-442351:-1:exon
so has part: feature:441685-441824:-1:exon
so has part: feature:441419-441567:-1:exon
so has part: feature:440938-441100:-1:exon
so has part: feature:440377-440511:-1:exon
so has part: feature:439529-439669:-1:exon
so has part: feature:439226-439394:-1:exon
so has part: feature:438570-438736:-1:exon
so has part: feature:437164-437316:-1:exon
so has part: feature:436355-436471:-1:exon
so has part: feature:435359-435562:-1:exon
so has part: feature:435090-435274:-1:exon
so has part: feature:434532-434679:-1:exon
so has part: feature:434007-434144:-1:exon
so has part: feature:433194-433325:-1:exon
so has part: feature:432214-432344:-1:exon
so has part: feature:431667-431877:-1:exon
so has part: feature:431177-431323:-1:exon
so has part: feature:430816-431014:-1:exon
so has part: feature:429983-430188:-1:exon
so has part: feature:429227-429288:-1:exon
so has part: feature:428027-428235:-1:exon
so has part: feature:427458-427730:-1:exon
so has part: feature:426522-426670:-1:exon
so has part: feature:425595-425678:-1:exon
so has part: feature:423739-423939:-1:exon
so has part: feature:422221-422352:-1:exon
so has part: feature:418167-418257:-1:exon
so has part: feature:417528-417712:-1:exon
so has part: feature:416625-416693:-1:exon
so has part: feature:415690-415784:-1:exon
so has part: feature:414905-415011:-1:exon
so has part: feature:413080-413175:-1:exon
so has part: feature:412754-412910:-1:exon
so has part: feature:411340-411458:-1:exon
so has part: feature:410693-410791:-1:exon
so has part: feature:409792-409847:-1:exon

XP_010713831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:454573-454723:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:452988-453092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:452589-452662:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:451116-451212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450625-450728:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:449814-449978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:448996-449088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:448806-448886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:447617-447704:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446984-447124:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446146-446237:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:445120-445317:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:444475-444582:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:443705-443931:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:442188-442351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:441685-441824:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:441419-441567:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:440938-441100:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:440377-440511:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:439529-439669:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:439226-439394:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:438570-438736:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:437164-437316:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:436355-436471:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:435359-435562:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:435090-435274:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:434532-434679:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:434007-434144:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:433194-433325:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:432214-432344:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:431667-431877:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:431177-431323:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:430816-431014:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:429983-430188:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:429227-429288:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:428027-428235:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:427458-427730:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:426522-426670:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:425595-425678:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:423739-423939:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:422221-422352:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:418167-418257:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:417528-417712:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:416625-416693:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:415690-415784:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:414905-415011:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:413080-413175:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:412754-412910:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:411340-411458:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:410693-410791:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:409792-409847:-1:exon

ODR4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 455429..476562
location: region:455429-476562:1
so has part: feature:455429-476562:1:exon
subclass of: SO_0000010

104912237
type: Gene
SIO_000068: ncbigene

position:455429:1
position: 455429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476562:1
position: 476562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455429-476562:1:exon

ODR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ODR4
product: odr-4 GPCR localization factor homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 217 samples with support for all annotated introns
transcript id: XM_010715534.2
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(455429..455464,455943..456077,456498..456629,457018..457113,458055..458161,459221..459257,459382..459522,460189..460284,460806..460871,467383..467511,468202..468292,469291..469476,474083..474175,475408..476562)
location: region:455429-476562:1
so has part: feature:455429-455464:1:exon
so has part: feature:455943-456077:1:exon
so has part: feature:456498-456629:1:exon
so has part: feature:457018-457113:1:exon
so has part: feature:458055-458161:1:exon
so has part: feature:459221-459257:1:exon
so has part: feature:459382-459522:1:exon
so has part: feature:460189-460284:1:exon
so has part: feature:460806-460871:1:exon
so has part: feature:467383-467511:1:exon
so has part: feature:468202-468292:1:exon
so has part: feature:469291-469476:1:exon
so has part: feature:474083-474175:1:exon
so has part: feature:475408-476562:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:455429-455464:1:exon

position:455464:1
position: 455464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:455943-456077:1:exon

position:455943:1
position: 455943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456077:1
position: 456077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:456498-456629:1:exon

position:456498:1
position: 456498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456629:1
position: 456629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:457018-457113:1:exon

position:457018:1
position: 457018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457113:1
position: 457113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:458055-458161:1:exon

position:458055:1
position: 458055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458161:1
position: 458161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:459221-459257:1:exon

position:459221:1
position: 459221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459257:1
position: 459257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:459382-459522:1:exon

position:459382:1
position: 459382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459522:1
position: 459522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:460189-460284:1:exon

position:460189:1
position: 460189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460284:1
position: 460284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:460806-460871:1:exon

position:460806:1
position: 460806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460871:1
position: 460871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:467383-467511:1:exon

position:467383:1
position: 467383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467511:1
position: 467511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:468202-468292:1:exon

position:468202:1
position: 468202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:468292:1
position: 468292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:469291-469476:1:exon

position:469291:1
position: 469291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469476:1
position: 469476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:474083-474175:1:exon

position:474083:1
position: 474083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:474175:1
position: 474175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:475408-476562:1:exon

position:475408:1
position: 475408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ODR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ODR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein odr-4 homolog
translation: MGRTYFVEETVGQYLSDLSVKFKPYVTGLLIGQCSPQRDYIIRAARTPPKEDQKEGNTSPSKLDSIDEEWITAHASQVSRMLPGGLLVVGVFIIVTPELSKDSQNVLRRLIFSIEKSLTKRRLWKPADEDVSDRAALQVCSATKKIVCRTYDVQDPKGSAKPADWKYQNALSASWLSLGCTVNVNIHIPLLATSPNHDLEKNTKNGLNRWSKQIEDSIFLINGQVKDNDTELLEGQKKLRGNIHSSIQIFDVKVLTQLSQGSSHRSTATVQVCSGSINLKGAVKCRAYVHNSKPKVKEAIQALKRDIINTLSDRCEILFEDLIMNEGHCKKNFERVYHVLPQRLFVPFAGSSVMLSDYKFGDEAAGEIQERFVEMLDQFVQAEDIHIAEEVNTVGICPISENMDDTQQKQLTEATLLLKLQQNMGVVIAIAVAVFASVFSFNYFSD
SIO_010081: ODR4
subclass of: SO_0000673
so part of: ODR4
location: join(455979..456077,456498..456629,457018..457113,458055..458161,459221..459257,459382..459522,460189..460284,460806..460871,467383..467511,468202..468292,469291..469476,474083..474175,475408..475475)
location: region:455979-475475:1
so has part: feature:455979-456077:1:exon
so has part: feature:456498-456629:1:exon
so has part: feature:457018-457113:1:exon
so has part: feature:458055-458161:1:exon
so has part: feature:459221-459257:1:exon
so has part: feature:459382-459522:1:exon
so has part: feature:460189-460284:1:exon
so has part: feature:460806-460871:1:exon
so has part: feature:467383-467511:1:exon
so has part: feature:468202-468292:1:exon
so has part: feature:469291-469476:1:exon
so has part: feature:474083-474175:1:exon
so has part: feature:475408-475475:1:exon

XP_010713836.1
type: Protein
SIO_000068: ncbiprotein

position:455979:1
position: 455979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475475:1
position: 475475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:455979-456077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:456498-456629:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457018-457113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:458055-458161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:459221-459257:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:459382-459522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:460189-460284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:460806-460871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:467383-467511:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:468202-468292:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:469291-469476:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:474083-474175:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:475408-475475:1:exon

PDC
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(480780..484964)
location: region:480780-484964:-1
so has part: feature:480780-484964:-1:exon
subclass of: SO_0000010

100549937
type: Gene
SIO_000068: ncbigene

position:480780:-1
position: 480780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484964:-1
position: 484964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:480780-484964:-1:exon

PDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PDC
product: phosducin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010715535.3
SIO_010081: PDC
subclass of: SO_0000673
so part of: PDC
location: complement(join(480780..481853,482532..482692,484425..484964))
location: region:480780-484964:-1
so has part: feature:484425-484964:-1:exon
so has part: feature:482532-482692:-1:exon
so has part: feature:480780-481853:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:484425-484964:-1:exon

position:484425:-1
position: 484425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:482532-482692:-1:exon

position:482532:-1
position: 482532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:482692:-1
position: 482692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:480780-481853:-1:exon

position:481853:-1
position: 481853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PDC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosducin
translation: MCILASLTPNCYRKLHITCHPAVNISLFYPVFVFFEHAASSTPVTNMEENANTSLEEDFEGQATHTGPKGVINDWRKFKLESEDKDSLPLSKKEILRQMSSPHRSFSKDDKDTRERFCRKMSMQEYELINDEKEDESCLQKYRKRCMQDMHQRLSFGPKYGYLCELQNGEQFLEAIEKERKTTTVIVHIYEDGIKGCDALNSSLTCLAAEYTTVKFCKIKASKTGAGDRFSDEVLPTLLIYKGGELLSNFISVSEQFNEEFFAVDVESFLNEYGLLPERELPALGNVNTDEQDVE
SIO_010081: PDC
subclass of: SO_0000673
so part of: PDC
location: complement(join(481326..481853,482532..482692,484425..484623))
location: region:481326-484623:-1
so has part: feature:484425-484623:-1:exon
so has part: feature:482532-482692:-1:exon
so has part: feature:481326-481853:-1:exon

XP_010713837.2
type: Protein
SIO_000068: ncbiprotein

position:481326:-1
position: 481326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484623:-1
position: 484623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484425-484623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:482532-482692:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481326-481853:-1:exon

LOC109369176
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369176
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 506799..507804
location: region:506799-507804:1
so has part: feature:506799-507804:1:exon
subclass of: SO_0000011

109369176
type: Gene
SIO_000068: ncbigene

position:506799:1
position: 506799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507804:1
position: 507804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506799-507804:1:exon

LOC109369176
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369176
product: uncharacterized LOC109369176
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XR_004160711.1
SIO_010081: LOC109369176
subclass of: SO_0000673
so part of: LOC109369176
location: join(506799..507001,507237..507804)
location: region:506799-507804:1
so has part: feature:506799-507001:1:exon
so has part: feature:507237-507804:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:506799-507001:1:exon

position:507001:1
position: 507001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:507237-507804:1:exon

position:507237:1
position: 507237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTGS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PTGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(575420..582636)
location: region:575420-582636:-1
so has part: feature:575420-582636:-1:exon
subclass of: SO_0000010

100550092
type: Gene
SIO_000068: ncbigene

position:575420:-1
position: 575420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582636:-1
position: 582636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:575420-582636:-1:exon

PTGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PTGS2
product: prostaglandin-endoperoxide synthase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_010715536.3
SIO_010081: PTGS2
subclass of: SO_0000673
so part of: PTGS2
location: complement(join(575420..577857,578009..578156,578309..578595,579562..579808,579984..580067,580815..580996,581414..581557,582020..582163,582271..582636))
location: region:575420-582636:-1
so has part: feature:582271-582636:-1:exon
so has part: feature:582020-582163:-1:exon
so has part: feature:581414-581557:-1:exon
so has part: feature:580815-580996:-1:exon
so has part: feature:579984-580067:-1:exon
so has part: feature:579562-579808:-1:exon
so has part: feature:578309-578595:-1:exon
so has part: feature:578009-578156:-1:exon
so has part: feature:575420-577857:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:582271-582636:-1:exon

position:582271:-1
position: 582271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:582020-582163:-1:exon

position:582020:-1
position: 582020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582163:-1
position: 582163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581414-581557:-1:exon

position:581414:-1
position: 581414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581557:-1
position: 581557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:580815-580996:-1:exon

position:580815:-1
position: 580815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580996:-1
position: 580996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:579984-580067:-1:exon

position:579984:-1
position: 579984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580067:-1
position: 580067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:579562-579808:-1:exon

position:579562:-1
position: 579562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579808:-1
position: 579808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:578309-578595:-1:exon

position:578309:-1
position: 578309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578595:-1
position: 578595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:578009-578156:-1:exon

position:578009:-1
position: 578009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578156:-1
position: 578156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:575420-577857:-1:exon

position:577857:-1
position: 577857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PTGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PTGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prostaglandin G/H synthase 2
translation: MTTGFDRYECDCTRTGYYGENCTTPEFFTWLKLTLKPTPNTVHYILTHFKGVWNIINNISFLRDTIMRYVLTSRSHLIDSPPTYNSDYNYKSWEAYSNLSYYTRSLPPVGHDCPTPMGVKGKKELPDSKLIVEKFLLRRKFIPDPQGTNVMFTFFAQHFTHQFFKTDHKKGPGFTKAFGHGVDLNHIYGETLERQLKLRLHKDGKLKYQMIDGEMYPPTVKDTQAEMIYPPHVPEHLQFSVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWDDEQLFQTTRLILIGETIKIVIEDYVQHLSGYHFKLKFDPELLFNQRFQYQNRIAAEFNTLYHWHPLLPDTFQIHDQEYTFQQFLYNNSIMLEHGLSHMVKSFSKQSAGRVAGGKNVPAAVQKVAKASIDQSRQMRYQSLNEYRKRFMLKPFKSFEELTGEKEMAAELEELYGDIDAMELYPGLLVEKPRPGAIFGETMVEIGAPFSLKGLMGNTICSPEYWKPSTFGGKVGFEIINTASLQKLICNNVKGCPFTAFHVLNPEPTEATINVSTSNTAMEDINPTLLLKERSAEL
SIO_010081: PTGS2
subclass of: SO_0000673
so part of: PTGS2
location: complement(join(577451..577857,578009..578156,578309..578595,579562..579808,579984..580067,580815..580996,581414..581557,582020..582163,582271..582343))
location: region:577451-582343:-1
so has part: feature:582271-582343:-1:exon
so has part: feature:582020-582163:-1:exon
so has part: feature:581414-581557:-1:exon
so has part: feature:580815-580996:-1:exon
so has part: feature:579984-580067:-1:exon
so has part: feature:579562-579808:-1:exon
so has part: feature:578309-578595:-1:exon
so has part: feature:578009-578156:-1:exon
so has part: feature:577451-577857:-1:exon

XP_010713838.1
type: Protein
SIO_000068: ncbiprotein

position:577451:-1
position: 577451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582343:-1
position: 582343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582271-582343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:582020-582163:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581414-581557:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:580815-580996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579984-580067:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:579562-579808:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:578309-578595:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:578009-578156:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:577451-577857:-1:exon

PLA2G4A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: PLA2G4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 622169..691072
location: region:622169-691072:1
so has part: feature:622169-691072:1:exon
subclass of: SO_0000010

100549476
type: Gene
SIO_000068: ncbigene

position:622169:1
position: 622169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691072:1
position: 691072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622169-691072:1:exon

PLA2G4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PLA2G4A
product: phospholipase A2 group IVA, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031554742.1
SIO_010081: PLA2G4A
subclass of: SO_0000673
so part of: PLA2G4A
location: join(622169..622250,622605..622656,628339..628436,628605..628739,634366..634447,646069..646217,649997..650110,652616..652653,654708..654849,661703..661839,666099..666321,668218..668332,671882..672019,672346..672438,674646..674717,676853..677095,683118..683302,685749..685944,686140..686297,687756..691072)
location: region:622169-691072:1
so has part: feature:622169-622250:1:exon
so has part: feature:622605-622656:1:exon
so has part: feature:628339-628436:1:exon
so has part: feature:628605-628739:1:exon
so has part: feature:634366-634447:1:exon
so has part: feature:646069-646217:1:exon
so has part: feature:649997-650110:1:exon
so has part: feature:652616-652653:1:exon
so has part: feature:654708-654849:1:exon
so has part: feature:661703-661839:1:exon
so has part: feature:666099-666321:1:exon
so has part: feature:668218-668332:1:exon
so has part: feature:671882-672019:1:exon
so has part: feature:672346-672438:1:exon
so has part: feature:674646-674717:1:exon
so has part: feature:676853-677095:1:exon
so has part: feature:683118-683302:1:exon
so has part: feature:685749-685944:1:exon
so has part: feature:686140-686297:1:exon
so has part: feature:687756-691072:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:622169-622250:1:exon

position:622250:1
position: 622250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622605-622656:1:exon

position:622605:1
position: 622605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:622656:1
position: 622656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:628339-628436:1:exon

position:628339:1
position: 628339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628436:1
position: 628436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:628605-628739:1:exon

position:628605:1
position: 628605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:628739:1
position: 628739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:634366-634447:1:exon

position:634366:1
position: 634366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634447:1
position: 634447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:646069-646217:1:exon

position:646069:1
position: 646069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:646217:1
position: 646217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:649997-650110:1:exon

position:649997:1
position: 649997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:650110:1
position: 650110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:652616-652653:1:exon

position:652616:1
position: 652616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652653:1
position: 652653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:654708-654849:1:exon

position:654708:1
position: 654708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:654849:1
position: 654849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:661703-661839:1:exon

position:661703:1
position: 661703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661839:1
position: 661839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:666099-666321:1:exon

position:666099:1
position: 666099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:666321:1
position: 666321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:668218-668332:1:exon

position:668218:1
position: 668218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:668332:1
position: 668332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:671882-672019:1:exon

position:671882:1
position: 671882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672019:1
position: 672019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:672346-672438:1:exon

position:672346:1
position: 672346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672438:1
position: 672438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:674646-674717:1:exon

position:674646:1
position: 674646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:674717:1
position: 674717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:676853-677095:1:exon

position:676853:1
position: 676853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677095:1
position: 677095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:683118-683302:1:exon

position:683118:1
position: 683118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683302:1
position: 683302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:685749-685944:1:exon

position:685749:1
position: 685749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685944:1
position: 685944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:686140-686297:1:exon

position:686140:1
position: 686140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:686297:1
position: 686297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:687756-691072:1:exon

position:687756:1
position: 687756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLA2G4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PLA2G4A
product: phospholipase A2 group IVA, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_019618425.2
SIO_010081: PLA2G4A
subclass of: SO_0000673
so part of: PLA2G4A
location: join(622178..622529,622605..622656,628339..628436,628605..628739,634366..634447,646069..646217,649997..650110,652616..652653,654708..654849,661703..661839,666099..666321,668218..668332,671882..672019,672346..672438,674646..674717,676853..677095,683118..683302,685749..685944,686140..686297,687756..691072)
location: region:622178-691072:1
so has part: feature:622178-622529:1:exon
so has part: feature:622605-622656:1:exon
so has part: feature:628339-628436:1:exon
so has part: feature:628605-628739:1:exon
so has part: feature:634366-634447:1:exon
so has part: feature:646069-646217:1:exon
so has part: feature:649997-650110:1:exon
so has part: feature:652616-652653:1:exon
so has part: feature:654708-654849:1:exon
so has part: feature:661703-661839:1:exon
so has part: feature:666099-666321:1:exon
so has part: feature:668218-668332:1:exon
so has part: feature:671882-672019:1:exon
so has part: feature:672346-672438:1:exon
so has part: feature:674646-674717:1:exon
so has part: feature:676853-677095:1:exon
so has part: feature:683118-683302:1:exon
so has part: feature:685749-685944:1:exon
so has part: feature:686140-686297:1:exon
so has part: feature:687756-691072:1:exon

position:622178:1
position: 622178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:622178-622529:1:exon

position:622529:1
position: 622529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:622605-622656:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:628339-628436:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:628605-628739:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:634366-634447:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:646069-646217:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:649997-650110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:652616-652653:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:654708-654849:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:661703-661839:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:666099-666321:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:668218-668332:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:671882-672019:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:672346-672438:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:674646-674717:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:676853-677095:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:683118-683302:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:685749-685944:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:686140-686297:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:687756-691072:1:exon

PLA2G4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PLA2G4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic phospholipase A2 isoform X1
translation: MSFIDPYQHIVVEHQYSHIFTVTVRKATNVTKGAIGDMLDTPDPYVELFIPSAPDCRKRTRHFNNDVNPVWNETFEFILDPNQENVLEVTLMDANYVMDETLGMAAFPISSLKLGEKKEVQLTFNNVTEMTLELSLEVCSSTDLRFSMALCDEEKKFRQQRKDNIMQSMKSFLGEENSKNLTTSRDVPVIAVLGSGGGFRAMVGFAGVMKALYESGVLDCATYIAGLSGSTWYMSTLYSHPDFPEKGPKEINQELMNSVSHNPLLLLTPQKVKRYIEALWNKKSSGQPVTFTDIFGMLIGETLIHNRMDTTLSDMKEKVNEAQCALPLFTCLHVKPDVSELMFADWVEFSPYEIGMAKYGTFMSPDLFGSKFFMGTVVKKYNENPLHFLMGVWGSAFSILFNRVLGVSNSQNKGPTMEEELENIRLKHLVSNDSSDSEDESQHPKGTENSEANEEYQNSSQESWVQRMLMALVGDSALFNTREGRAGKVHNFMLGLNLNSCYPLSPLADLLTQESVEEDELDAAVADPDEFERIYEPLDVKSKKIHIVDSGLTFNLPYPLILRPQRGVDLIISFDFSARPSDSSPPFKEILLAEKWAKMNKLPFPKIDPNVFDREGLKECYVFKPKDTSSEKDCPTIIHFVLANINFRKYKAPGLPRETKEEKDFADFDIFDDPNTPFSTFNFQYPNEAFKRLHDLMEFNTLNNLDVIKQAMMESIEYRKENPSRCSVSLSSVEARRFFNKNNLNNSHT
SIO_010081: PLA2G4A
subclass of: SO_0000673
so part of: PLA2G4A
location: join(628707..628739,634366..634447,646069..646217,649997..650110,652616..652653,654708..654849,661703..661839,666099..666321,668218..668332,671882..672019,672346..672438,674646..674717,676853..677095,683118..683302,685749..685944,686140..686297,687756..687887)
location: region:628707-687887:1
so has part: feature:628707-628739:1:exon
so has part: feature:634366-634447:1:exon
so has part: feature:646069-646217:1:exon
so has part: feature:649997-650110:1:exon
so has part: feature:652616-652653:1:exon
so has part: feature:654708-654849:1:exon
so has part: feature:661703-661839:1:exon
so has part: feature:666099-666321:1:exon
so has part: feature:668218-668332:1:exon
so has part: feature:671882-672019:1:exon
so has part: feature:672346-672438:1:exon
so has part: feature:674646-674717:1:exon
so has part: feature:676853-677095:1:exon
so has part: feature:683118-683302:1:exon
so has part: feature:685749-685944:1:exon
so has part: feature:686140-686297:1:exon
so has part: feature:687756-687887:1:exon

XP_019473970.1
type: Protein
SIO_000068: ncbiprotein

position:628707:1
position: 628707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:687887:1
position: 687887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628707-628739:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634366-634447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646069-646217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649997-650110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:652616-652653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654708-654849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:661703-661839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666099-666321:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668218-668332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671882-672019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:672346-672438:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:674646-674717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:676853-677095:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:683118-683302:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685749-685944:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:686140-686297:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:687756-687887:1:exon

PLA2G4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PLA2G4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic phospholipase A2 isoform X1
translation: MSFIDPYQHIVVEHQYSHIFTVTVRKATNVTKGAIGDMLDTPDPYVELFIPSAPDCRKRTRHFNNDVNPVWNETFEFILDPNQENVLEVTLMDANYVMDETLGMAAFPISSLKLGEKKEVQLTFNNVTEMTLELSLEVCSSTDLRFSMALCDEEKKFRQQRKDNIMQSMKSFLGEENSKNLTTSRDVPVIAVLGSGGGFRAMVGFAGVMKALYESGVLDCATYIAGLSGSTWYMSTLYSHPDFPEKGPKEINQELMNSVSHNPLLLLTPQKVKRYIEALWNKKSSGQPVTFTDIFGMLIGETLIHNRMDTTLSDMKEKVNEAQCALPLFTCLHVKPDVSELMFADWVEFSPYEIGMAKYGTFMSPDLFGSKFFMGTVVKKYNENPLHFLMGVWGSAFSILFNRVLGVSNSQNKGPTMEEELENIRLKHLVSNDSSDSEDESQHPKGTENSEANEEYQNSSQESWVQRMLMALVGDSALFNTREGRAGKVHNFMLGLNLNSCYPLSPLADLLTQESVEEDELDAAVADPDEFERIYEPLDVKSKKIHIVDSGLTFNLPYPLILRPQRGVDLIISFDFSARPSDSSPPFKEILLAEKWAKMNKLPFPKIDPNVFDREGLKECYVFKPKDTSSEKDCPTIIHFVLANINFRKYKAPGLPRETKEEKDFADFDIFDDPNTPFSTFNFQYPNEAFKRLHDLMEFNTLNNLDVIKQAMMESIEYRKENPSRCSVSLSSVEARRFFNKNNLNNSHT
SIO_010081: PLA2G4A
subclass of: SO_0000673
so part of: PLA2G4A
location: join(628707..628739,634366..634447,646069..646217,649997..650110,652616..652653,654708..654849,661703..661839,666099..666321,668218..668332,671882..672019,672346..672438,674646..674717,676853..677095,683118..683302,685749..685944,686140..686297,687756..687887)
location: region:628707-687887:1
so has part: feature:628707-628739:1:exon
so has part: feature:634366-634447:1:exon
so has part: feature:646069-646217:1:exon
so has part: feature:649997-650110:1:exon
so has part: feature:652616-652653:1:exon
so has part: feature:654708-654849:1:exon
so has part: feature:661703-661839:1:exon
so has part: feature:666099-666321:1:exon
so has part: feature:668218-668332:1:exon
so has part: feature:671882-672019:1:exon
so has part: feature:672346-672438:1:exon
so has part: feature:674646-674717:1:exon
so has part: feature:676853-677095:1:exon
so has part: feature:683118-683302:1:exon
so has part: feature:685749-685944:1:exon
so has part: feature:686140-686297:1:exon
so has part: feature:687756-687887:1:exon

XP_031410602.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:628707-628739:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634366-634447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646069-646217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649997-650110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:652616-652653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654708-654849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:661703-661839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666099-666321:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668218-668332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671882-672019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:672346-672438:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:674646-674717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:676853-677095:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:683118-683302:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685749-685944:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:686140-686297:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:687756-687887:1:exon

PLA2G4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: PLA2G4A
product: phospholipase A2 group IVA, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019618426.2
SIO_010081: PLA2G4A
subclass of: SO_0000673
so part of: PLA2G4A
location: join(634187..634222,634366..634447,646069..646217,649997..650110,652616..652653,654708..654849,661703..661839,666099..666321,668218..668332,671882..672019,672346..672438,674646..674717,676853..677095,683118..683302,685749..685944,686140..686297,687756..691072)
location: region:634187-691072:1
so has part: feature:634187-634222:1:exon
so has part: feature:634366-634447:1:exon
so has part: feature:646069-646217:1:exon
so has part: feature:649997-650110:1:exon
so has part: feature:652616-652653:1:exon
so has part: feature:654708-654849:1:exon
so has part: feature:661703-661839:1:exon
so has part: feature:666099-666321:1:exon
so has part: feature:668218-668332:1:exon
so has part: feature:671882-672019:1:exon
so has part: feature:672346-672438:1:exon
so has part: feature:674646-674717:1:exon
so has part: feature:676853-677095:1:exon
so has part: feature:683118-683302:1:exon
so has part: feature:685749-685944:1:exon
so has part: feature:686140-686297:1:exon
so has part: feature:687756-691072:1:exon

position:634187:1
position: 634187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634187-634222:1:exon

position:634222:1
position: 634222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:634366-634447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646069-646217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649997-650110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:652616-652653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654708-654849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:661703-661839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666099-666321:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668218-668332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671882-672019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:672346-672438:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:674646-674717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:676853-677095:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:683118-683302:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685749-685944:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:686140-686297:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:687756-691072:1:exon

PLA2G4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: PLA2G4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytosolic phospholipase A2 isoform X2
translation: MMLYPVEHQYSHIFTVTVRKATNVTKGAIGDMLDTPDPYVELFIPSAPDCRKRTRHFNNDVNPVWNETFEFILDPNQENVLEVTLMDANYVMDETLGMAAFPISSLKLGEKKEVQLTFNNVTEMTLELSLEVCSSTDLRFSMALCDEEKKFRQQRKDNIMQSMKSFLGEENSKNLTTSRDVPVIAVLGSGGGFRAMVGFAGVMKALYESGVLDCATYIAGLSGSTWYMSTLYSHPDFPEKGPKEINQELMNSVSHNPLLLLTPQKVKRYIEALWNKKSSGQPVTFTDIFGMLIGETLIHNRMDTTLSDMKEKVNEAQCALPLFTCLHVKPDVSELMFADWVEFSPYEIGMAKYGTFMSPDLFGSKFFMGTVVKKYNENPLHFLMGVWGSAFSILFNRVLGVSNSQNKGPTMEEELENIRLKHLVSNDSSDSEDESQHPKGTENSEANEEYQNSSQESWVQRMLMALVGDSALFNTREGRAGKVHNFMLGLNLNSCYPLSPLADLLTQESVEEDELDAAVADPDEFERIYEPLDVKSKKIHIVDSGLTFNLPYPLILRPQRGVDLIISFDFSARPSDSSPPFKEILLAEKWAKMNKLPFPKIDPNVFDREGLKECYVFKPKDTSSEKDCPTIIHFVLANINFRKYKAPGLPRETKEEKDFADFDIFDDPNTPFSTFNFQYPNEAFKRLHDLMEFNTLNNLDVIKQAMMESIEYRKENPSRCSVSLSSVEARRFFNKNNLNNSHT
SIO_010081: PLA2G4A
subclass of: SO_0000673
so part of: PLA2G4A
location: join(634208..634222,634366..634447,646069..646217,649997..650110,652616..652653,654708..654849,661703..661839,666099..666321,668218..668332,671882..672019,672346..672438,674646..674717,676853..677095,683118..683302,685749..685944,686140..686297,687756..687887)
location: region:634208-687887:1
so has part: feature:634208-634222:1:exon
so has part: feature:634366-634447:1:exon
so has part: feature:646069-646217:1:exon
so has part: feature:649997-650110:1:exon
so has part: feature:652616-652653:1:exon
so has part: feature:654708-654849:1:exon
so has part: feature:661703-661839:1:exon
so has part: feature:666099-666321:1:exon
so has part: feature:668218-668332:1:exon
so has part: feature:671882-672019:1:exon
so has part: feature:672346-672438:1:exon
so has part: feature:674646-674717:1:exon
so has part: feature:676853-677095:1:exon
so has part: feature:683118-683302:1:exon
so has part: feature:685749-685944:1:exon
so has part: feature:686140-686297:1:exon
so has part: feature:687756-687887:1:exon

XP_019473971.1
type: Protein
SIO_000068: ncbiprotein

position:634208:1
position: 634208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634208-634222:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634366-634447:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:646069-646217:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:649997-650110:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:652616-652653:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:654708-654849:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:661703-661839:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:666099-666321:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:668218-668332:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:671882-672019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:672346-672438:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:674646-674717:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:676853-677095:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:683118-683302:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:685749-685944:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:686140-686297:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:687756-687887:1:exon

LOC109369123
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1017091..1029802
location: region:1017091-1029802:1
so has part: feature:1017091-1029802:1:exon
subclass of: SO_0000010

109369123
type: Gene
SIO_000068: ncbigene

position:1017091:1
position: 1017091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029802:1
position: 1029802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017091-1029802:1:exon

LOC109369123
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369123
product: uncharacterized LOC109369123
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019618344.1
SIO_010081: LOC109369123
subclass of: SO_0000673
so part of: LOC109369123
location: join(1017091..1017471,1025797..1027278,1027543..1027612,1027799..1029802)
location: region:1017091-1029802:1
so has part: feature:1017091-1017471:1:exon
so has part: feature:1025797-1027278:1:exon
so has part: feature:1027543-1027612:1:exon
so has part: feature:1027799-1029802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1017091-1017471:1:exon

position:1017471:1
position: 1017471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1025797-1027278:1:exon

position:1025797:1
position: 1025797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027278:1
position: 1027278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1027543-1027612:1:exon

position:1027543:1
position: 1027543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027612:1
position: 1027612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1027799-1029802:1:exon

position:1027799:1
position: 1027799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109369123
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109369123
translation: MEQVERIQKGSTKMFRELKHFSYEERLGELGLFSLEKAHGDLIETYKCLKEECKWCTLPGQDAQIEAQEVMSEYQETLTVRMFQHRHRLPREAVDSSSLDTFGSHLDMGLGNLMRRIWESWWTKSFNAAGREFPASVTCGGAGGRSGQPRPSLLPRLRRPGLPAAAPWRAAAASSRVSNLPALQAAASSTPSPSGRARAVGVRGSRLPVLARRPHVQDGTARAESRGAALEVCSTVLVPRHARAGQNYVVSLNCAAAASPRVGVQLAVPGRRAPTSGLRTPAGTAQVLSTKAGKIHAAWRDAQEGTRDTRAATTPSSRAAQKGPERQAGGKERDKEPLPALVPEDAGNLDDPEPAGCLESLPASVLEHAESSDSSDEADAASLPLSVSEGEEREESAMAMPESSGQGLGEARRLLDPSEMNREPYGHSPVIPAMRRIRDEDRNDHVLSHWNISWPRNVRSPRQRRLQARGDTFNNVGPVQGMPAIRPTTSQAGNWFLDSGDTQKRTVRLPVILVGSSNDSNSAASTAEGTLDARDTVVTDEGMRLPSCPCPSAPENVEEDWECDSEEDAEAEAVSITSSTSNESSGEAEATSSASSMAADPMTEEHASACEEAEDVGPQHEASAEAEEHALSSVCFRDAPEDGPGTAAAPHAASRRRMPAVIRTVLRALRRVCTCSCIRGQREERHEAANTRQLPRDV
SIO_010081: LOC109369123
subclass of: SO_0000673
so part of: LOC109369123
location: join(1017091..1017471,1025797..1027278,1027543..1027612,1027799..1027962)
location: region:1017091-1027962:1
so has part: feature:1017091-1017471:1:exon
so has part: feature:1025797-1027278:1:exon
so has part: feature:1027543-1027612:1:exon
so has part: feature:1027799-1027962:1:exon

XP_019473889.1
type: Protein
SIO_000068: ncbiprotein

position:1027962:1
position: 1027962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017091-1017471:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1025797-1027278:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1027543-1027612:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1027799-1027962:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1025669..1025768
location: region:1025669-1025768:1
so has part: feature:1025669-1025768:1:region

position:1025669:1
position: 1025669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025768:1
position: 1025768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1025669-1025768:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1029811..1029910
location: region:1029811-1029910:1
so has part: feature:1029811-1029910:1:region

position:1029811:1
position: 1029811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029910:1
position: 1029910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029811-1029910:1:region

LOC109369124
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1029918..1034022
location: region:1029918-1034022:1
so has part: feature:1029918-1034022:1:exon
subclass of: SO_0000010

109369124
type: Gene
SIO_000068: ncbigene

position:1029918:1
position: 1029918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034022:1
position: 1034022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029918-1034022:1:exon

LOC109369124
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369124
product: uncharacterized LOC109369124
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031554743.1
SIO_010081: LOC109369124
subclass of: SO_0000673
so part of: LOC109369124
location: join(1029918..1031033,1031298..1031367,1031554..1033231,1033365..1033740,1033932..1034022)
location: region:1029918-1034022:1
so has part: feature:1029918-1031033:1:exon
so has part: feature:1031298-1031367:1:exon
so has part: feature:1031554-1033231:1:exon
so has part: feature:1033365-1033740:1:exon
so has part: feature:1033932-1034022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1029918-1031033:1:exon

position:1031033:1
position: 1031033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1031298-1031367:1:exon

position:1031298:1
position: 1031298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031367:1
position: 1031367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1031554-1033231:1:exon

position:1031554:1
position: 1031554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033231:1
position: 1033231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1033365-1033740:1:exon

position:1033365:1
position: 1033365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033740:1
position: 1033740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1033932-1034022:1:exon

position:1033932:1
position: 1033932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109369124
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369124
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC109369124
translation: MAMPESSGQGLGEARRLLDPSEMNREPYGHSPVIPAMRRIRDEDRNDHVLSHWNISWPRNVRSPRQRRLQARGDTFNNVGPVQGMPAIRPTTSQAGNWFLDSGDTQKRTVRLPVILVGSSNDSNSAASTAEGTLDARDTVVTDEGMRLPSCPCPSAPENVEEDWECDSEEDAEAEAVSITSSTSNESSGEAEATSSASSMAADPMTEEHASACEEAEDVGPQHEASAEAEEHALSSVCFRDAPEDGPGTAAAPHAASRRRMPAVIRTVLRALRRVCTCSCIRGQREERHEAANTRQLPRDV
SIO_010081: LOC109369124
subclass of: SO_0000673
so part of: LOC109369124
location: join(1030362..1031033,1031298..1031367,1031554..1031717)
location: region:1030362-1031717:1
so has part: feature:1030362-1031033:1:exon
so has part: feature:1031298-1031367:1:exon
so has part: feature:1031554-1031717:1:exon

XP_031410603.1
type: Protein
SIO_000068: ncbiprotein

position:1030362:1
position: 1030362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031717:1
position: 1031717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1030362-1031033:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1031298-1031367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1031554-1031717:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1036914..1037013
location: region:1036914-1037013:1
so has part: feature:1036914-1037013:1:region

position:1036914:1
position: 1036914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1037013:1
position: 1037013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1036914-1037013:1:region

LOC104912240
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1134002..1136476)
location: region:1134002-1136476:-1
so has part: feature:1134002-1136476:-1:exon
subclass of: SO_0000011

104912240
type: Gene
SIO_000068: ncbigene

position:1134002:-1
position: 1134002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1136476:-1
position: 1136476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1134002-1136476:-1:exon

LOC104912240
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912240
product: uncharacterized LOC104912240
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_794488.2
SIO_010081: LOC104912240
subclass of: SO_0000673
so part of: LOC104912240
location: complement(join(1134002..1134738,1135206..1135269,1136417..1136476))
location: region:1134002-1136476:-1
so has part: feature:1136417-1136476:-1:exon
so has part: feature:1135206-1135269:-1:exon
so has part: feature:1134002-1134738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1136417-1136476:-1:exon

position:1136417:-1
position: 1136417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1135206-1135269:-1:exon

position:1135206:-1
position: 1135206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1135269:-1
position: 1135269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1134002-1134738:-1:exon

position:1134738:-1
position: 1134738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116217002
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116217002
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1235902..1240631)
location: region:1235902-1240631:-1
so has part: feature:1235902-1240631:-1:exon
subclass of: SO_0000011

116217002
type: Gene
SIO_000068: ncbigene

position:1235902:-1
position: 1235902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1240631:-1
position: 1240631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1235902-1240631:-1:exon

LOC116217002
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116217002
product: uncharacterized LOC116217002
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004160833.1
SIO_010081: LOC116217002
subclass of: SO_0000673
so part of: LOC116217002
location: complement(join(1235902..1236839,1238155..1238233,1240197..1240631))
location: region:1235902-1240631:-1
so has part: feature:1240197-1240631:-1:exon
so has part: feature:1238155-1238233:-1:exon
so has part: feature:1235902-1236839:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1240197-1240631:-1:exon

position:1240197:-1
position: 1240197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1238155-1238233:-1:exon

position:1238155:-1
position: 1238155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238233:-1
position: 1238233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1235902-1236839:-1:exon

position:1236839:-1
position: 1236839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109369182
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1255687..1266949)
location: region:1255687-1266949:-1
so has part: feature:1255687-1266949:-1:exon
subclass of: SO_0000011

109369182
type: Gene
SIO_000068: ncbigene

position:1255687:-1
position: 1255687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1266949:-1
position: 1266949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1255687-1266949:-1:exon

LOC109369182
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369182
product: uncharacterized LOC109369182
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004160834.1
SIO_010081: LOC109369182
subclass of: SO_0000673
so part of: LOC109369182
location: complement(join(1255687..1255885,1256516..1256646,1257298..1257371,1266850..1266949))
location: region:1255687-1266949:-1
so has part: feature:1266850-1266949:-1:exon
so has part: feature:1257298-1257371:-1:exon
so has part: feature:1256516-1256646:-1:exon
so has part: feature:1255687-1255885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1266850-1266949:-1:exon

position:1266850:-1
position: 1266850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1257298-1257371:-1:exon

position:1257298:-1
position: 1257298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257371:-1
position: 1257371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1256516-1256646:-1:exon

position:1256516:-1
position: 1256516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256646:-1
position: 1256646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1255687-1255885:-1:exon

position:1255885:-1
position: 1255885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109369183
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369183
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1287221..1305595)
location: region:1287221-1305595:-1
so has part: feature:1287221-1305595:-1:exon
subclass of: SO_0000011

109369183
type: Gene
SIO_000068: ncbigene

position:1287221:-1
position: 1287221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305595:-1
position: 1305595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1287221-1305595:-1:exon

LOC109369183
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369183
product: uncharacterized LOC109369183
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002117865.2
SIO_010081: LOC109369183
subclass of: SO_0000673
so part of: LOC109369183
location: complement(join(1287221..1289002,1290098..1290376,1305316..1305595))
location: region:1287221-1305595:-1
so has part: feature:1305316-1305595:-1:exon
so has part: feature:1290098-1290376:-1:exon
so has part: feature:1287221-1289002:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305316-1305595:-1:exon

position:1305316:-1
position: 1305316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1290098-1290376:-1:exon

position:1290098:-1
position: 1290098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290376:-1
position: 1290376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1287221-1289002:-1:exon

position:1289002:-1
position: 1289002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109369125
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369125
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1320594..1477119)
location: region:1320594-1477119:-1
so has part: feature:1320594-1477119:-1:exon
subclass of: SO_0000010

109369125
type: Gene
SIO_000068: ncbigene

position:1320594:-1
position: 1320594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1477119:-1
position: 1477119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320594-1477119:-1:exon

LOC109369125
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369125
product: uncharacterized LOC109369125
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031554943.1
SIO_010081: LOC109369125
subclass of: SO_0000673
so part of: LOC109369125
location: complement(join(1320594..1320821,1435155..1436082,1477040..1477119))
location: region:1320594-1477119:-1
so has part: feature:1477040-1477119:-1:exon
so has part: feature:1435155-1436082:-1:exon
so has part: feature:1320594-1320821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1477040-1477119:-1:exon

position:1477040:-1
position: 1477040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1435155-1436082:-1:exon

position:1435155:-1
position: 1435155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1436082:-1
position: 1436082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1320594-1320821:-1:exon

position:1320821:-1
position: 1320821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109369125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369125
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein LOC109369125
translation: MGAGRDDTVLGLRITKTCVPVQTDKTWKEKIGIFLIVGLGSRNTLDPISLIKCTWLPHFASKRSLPCDAAVTQWNVPMVTFVKVPLPAARVPLRFLLLLAGQALLAAGTVVDRNFCPGEKFTIPMETPSLETSGVSLPNTQSAVSASAAHRLRGKRAAADAALGPLQEEKTSPFSPGEVCAKRRCCGPSEKCSGKAHDMSSCSFLNHLRKVVESDGFQSIWWXDDGDFIVIEEPFFTTEVLARGGVFDVGNMKDFVRLLHHHGFYIVDADLPTSASRARFLAEGASISTPSEVRSPSTCETALGTAALVASQSEVRWLTAGDTWVRVLLRILHYSAHLQGEENASGSDDNATGPPTPVIDTAAAPLPVAGPVCALSIAAEPTATPTPTVQPENQSVPQRQDEKMPNESQNI
SIO_010081: LOC109369125
subclass of: SO_0000673
so part of: LOC109369125
location: complement(join(1320594..1320821,1435155..1436082,1477040..1477119))
location: region:1320594-1477119:-1
so has part: feature:1477040-1477119:-1:exon
so has part: feature:1435155-1436082:-1:exon
so has part: feature:1320594-1320821:-1:exon

XP_031410803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1477040-1477119:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1435155-1436082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1320594-1320821:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1567117..1567216
location: region:1567117-1567216:1
so has part: feature:1567117-1567216:1:region

position:1567117:1
position: 1567117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1567216:1
position: 1567216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567117-1567216:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 1568000..1568099
location: region:1568000-1568099:1
so has part: feature:1568000-1568099:1:region

position:1568000:1
position: 1568000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1568099:1
position: 1568099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1568000-1568099:1:region

LOC116216964
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116216964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1573217..1599280
location: region:1573217-1599280:1
so has part: feature:1573217-1599280:1:exon
subclass of: SO_0000011

116216964
type: Gene
SIO_000068: ncbigene

position:1573217:1
position: 1573217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599280:1
position: 1599280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1573217-1599280:1:exon

LOC116216964
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216964
product: uncharacterized LOC116216964
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004160712.1
SIO_010081: LOC116216964
subclass of: SO_0000673
so part of: LOC116216964
location: join(1573217..1573377,1581353..1581473,1590839..1590929,1598965..1599060,1599146..1599280)
location: region:1573217-1599280:1
so has part: feature:1573217-1573377:1:exon
so has part: feature:1581353-1581473:1:exon
so has part: feature:1590839-1590929:1:exon
so has part: feature:1598965-1599060:1:exon
so has part: feature:1599146-1599280:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1573217-1573377:1:exon

position:1573377:1
position: 1573377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1581353-1581473:1:exon

position:1581353:1
position: 1581353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581473:1
position: 1581473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1590839-1590929:1:exon

position:1590839:1
position: 1590839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1590929:1
position: 1590929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1598965-1599060:1:exon

position:1598965:1
position: 1598965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1599060:1
position: 1599060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1599146-1599280:1:exon

position:1599146:1
position: 1599146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109369126
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1739134..>1740767)
location: region:1739134-1740767:-1
so has part: feature:1739134-1740767:-1:exon
subclass of: SO_0000010

109369126
type: Gene
SIO_000068: ncbigene

position:1739134:-1
position: 1739134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740767:-1
position: 1740767
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1739134-1740767:-1:exon

LOC109369126
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369126
product: heat shock transcription factor, Y-linked-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019618347.1
SIO_010081: LOC109369126
subclass of: SO_0000673
so part of: LOC109369126
location: complement(join(1739134..1739624,1740054..>1740767))
location: region:1739134-1740767:-1
so has part: feature:1740054-1740767:-1:exon
so has part: feature:1739134-1739624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1740054-1740767:-1:exon

position:1740054:-1
position: 1740054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1739134-1739624:-1:exon

position:1739624:-1
position: 1739624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109369126
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369126
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heat shock transcription factor, Y-linked-like
translation: WLPHFASKRPLPCDAAVTQWNVPMVTFVKVPLSAARVPLRFLLLLAGQALLAAGTVVDRNFCPGEKFTIPMETPSLETSGVSLPNTQSAVSASAAHRLRGKRAAADAALGPLQEEKTSPFSPGEVCAKRRCCGPSEKCSGKAHDMSSCSFLNHLRKVVESDGFQSIWWGDDGDFIVIEEPFFTTEVLARGGVFDVGNMKDFVRLLHHHGFYIVDADLPTSASRARFLAEGVSISTPSELLCYYHPYFKRDHLQCQRRFKRSVGARRRRPAASSQALAWKEGQQSSSLQSEMQSGAAAWAGSELPVSSCSAAPAAPAAADHSARPVPSGPFPPGLGPDSGAAGDGVARVYNLRSRKHCRRE
SIO_010081: LOC109369126
subclass of: SO_0000673
so part of: LOC109369126
location: complement(join(1739256..1739624,1740054..>1740767))
location: region:1739256-1740767:-1
so has part: feature:1740054-1740767:-1:exon
so has part: feature:1739256-1739624:-1:exon

XP_019473892.1
type: Protein
SIO_000068: ncbiprotein

position:1739256:-1
position: 1739256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1740054-1740767:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1739256-1739624:-1:exon

BRINP3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: BRINP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1814490..2016714)
location: region:1814490-2016714:-1
so has part: feature:1814490-2016714:-1:exon
subclass of: SO_0000010

100550398
type: Gene
SIO_000068: ncbigene

position:1814490:-1
position: 1814490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2016714:-1
position: 2016714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1814490-2016714:-1:exon

BRINP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: BRINP3
product: BMP/retinoic acid inducible neural specific 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019618427.1
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(1814490..1817965,1853364..1853586,1869757..1869993,1874283..1874388,1892335..1892525,1999579..1999699))
location: region:1814490-1999699:-1
so has part: feature:1999579-1999699:-1:exon
so has part: feature:1892335-1892525:-1:exon
so has part: feature:1874283-1874388:-1:exon
so has part: feature:1869757-1869993:-1:exon
so has part: feature:1853364-1853586:-1:exon
so has part: feature:1814490-1817965:-1:exon

position:1999699:-1
position: 1999699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1999579-1999699:-1:exon

position:1999579:-1
position: 1999579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1892335-1892525:-1:exon

position:1892335:-1
position: 1892335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1892525:-1
position: 1892525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1874283-1874388:-1:exon

position:1874283:-1
position: 1874283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874388:-1
position: 1874388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1869757-1869993:-1:exon

position:1869757:-1
position: 1869757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1869993:-1
position: 1869993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1853364-1853586:-1:exon

position:1853364:-1
position: 1853364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853586:-1
position: 1853586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1814490-1817965:-1:exon

position:1817965:-1
position: 1817965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BRINP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: BRINP3
product: BMP/retinoic acid inducible neural specific 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010715542.3
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(1814492..1817965,1853364..1853586,1869757..1869993,1874283..1874388,1892335..1892525,1901847..1902037,1999579..1999864,2016363..2016714))
location: region:1814492-2016714:-1
so has part: feature:2016363-2016714:-1:exon
so has part: feature:1999579-1999864:-1:exon
so has part: feature:1901847-1902037:-1:exon
so has part: feature:1892335-1892525:-1:exon
so has part: feature:1874283-1874388:-1:exon
so has part: feature:1869757-1869993:-1:exon
so has part: feature:1853364-1853586:-1:exon
so has part: feature:1814492-1817965:-1:exon

position:1814492:-1
position: 1814492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2016363-2016714:-1:exon

position:2016363:-1
position: 2016363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1999579-1999864:-1:exon

position:1999864:-1
position: 1999864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1901847-1902037:-1:exon

position:1901847:-1
position: 1901847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902037:-1
position: 1902037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1892335-1892525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1874283-1874388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869757-1869993:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1853364-1853586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1814492-1817965:-1:exon

BRINP3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: BRINP3
product: BMP/retinoic acid inducible neural specific 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010715544.3
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(1814492..1817965,1853364..1853586,1869757..1869993,1874283..1874388,1892335..1892525,1901847..1902037,1999579..1999864,2012997..2013081))
location: region:1814492-2013081:-1
so has part: feature:2012997-2013081:-1:exon
so has part: feature:1999579-1999864:-1:exon
so has part: feature:1901847-1902037:-1:exon
so has part: feature:1892335-1892525:-1:exon
so has part: feature:1874283-1874388:-1:exon
so has part: feature:1869757-1869993:-1:exon
so has part: feature:1853364-1853586:-1:exon
so has part: feature:1814492-1817965:-1:exon

position:2013081:-1
position: 2013081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2012997-2013081:-1:exon

position:2012997:-1
position: 2012997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1999579-1999864:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1901847-1902037:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1892335-1892525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1874283-1874388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1869757-1869993:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1853364-1853586:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1814492-1817965:-1:exon

BRINP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: BRINP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 3 isoform X1
translation: MIWRCSAGAELFSLMALWEWIALSLHCWVLAVAAVSDQHATSPFDWLLSDKGPFHRSQEYTDFVDRSRQGFSTRYKIYREFGRWKVNNLAVERRNFLGSPLPLAPEFFRNIRLLGRRPTLQQITENLIKKYGTHFLLSATLGGEESLTIFVDKRKLSKRSDGSDPSTNSSVVTLETLHQLAASYFIDRDSTLRRLHHIQIASTAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKIQLQGLQVILPEYLQEHFVQAALSYIACNSEGEFICKDNDCWCQCGPKFPECNCPYMDIQAMEENLLRISETWNAYNSEFEESDEFKLFMKRLPMNYFLNTTTVMHLWTMDSNFQRRYEQLENSMKQLFLKAQKIVHKLFGLSKRCHKQPLIRMPKQRSSNYWLNRIQSFLYCNENGLLGSFSEETHTCTCPNDQVACHGFLPCTVGDGSACLSCAPDNRTRCGSCNAGYMLSQGICKPEVAESTEHYIGFETDLQDLEMKYLLQKTDRRIEVHAIFISNDMRLNNWFDPSWRKRMLLTLKSNKYKSSLVHMILGLSLQICLTKNSTLEPVLAVYVNPFGGSHSESWFMPVNENNFPDWERTKLDLPLQCYNWTLTLGNKWKTFFETVHIYLRSRIKSNGPNGNESIYYEPLEFIDPSRNLGYMKINNIQVFGYSMHFDPEAIRDLILQLDYPYTQGSQDSALLQLLEIRDRVNKLSPPGQRRLDLFSCLLRHRLKLSTSEVVRIQSALQAFNAKLPNTVDYDTTKLCS
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(1816849..1817965,1853364..1853586,1869757..1869993,1874283..1874388,1892335..1892525,1901847..1902037,1999579..1999814))
location: region:1816849-1999814:-1
so has part: feature:1999579-1999814:-1:exon
so has part: feature:1901847-1902037:-1:exon
so has part: feature:1892335-1892525:-1:exon
so has part: feature:1874283-1874388:-1:exon
so has part: feature:1869757-1869993:-1:exon
so has part: feature:1853364-1853586:-1:exon
so has part: feature:1816849-1817965:-1:exon

XP_010713844.1
type: Protein
SIO_000068: ncbiprotein

position:1816849:-1
position: 1816849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1999814:-1
position: 1999814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1999579-1999814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1901847-1902037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1892335-1892525:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1874283-1874388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869757-1869993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1853364-1853586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1816849-1817965:-1:exon

BRINP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: BRINP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 3 isoform X1
translation: MIWRCSAGAELFSLMALWEWIALSLHCWVLAVAAVSDQHATSPFDWLLSDKGPFHRSQEYTDFVDRSRQGFSTRYKIYREFGRWKVNNLAVERRNFLGSPLPLAPEFFRNIRLLGRRPTLQQITENLIKKYGTHFLLSATLGGEESLTIFVDKRKLSKRSDGSDPSTNSSVVTLETLHQLAASYFIDRDSTLRRLHHIQIASTAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKIQLQGLQVILPEYLQEHFVQAALSYIACNSEGEFICKDNDCWCQCGPKFPECNCPYMDIQAMEENLLRISETWNAYNSEFEESDEFKLFMKRLPMNYFLNTTTVMHLWTMDSNFQRRYEQLENSMKQLFLKAQKIVHKLFGLSKRCHKQPLIRMPKQRSSNYWLNRIQSFLYCNENGLLGSFSEETHTCTCPNDQVACHGFLPCTVGDGSACLSCAPDNRTRCGSCNAGYMLSQGICKPEVAESTEHYIGFETDLQDLEMKYLLQKTDRRIEVHAIFISNDMRLNNWFDPSWRKRMLLTLKSNKYKSSLVHMILGLSLQICLTKNSTLEPVLAVYVNPFGGSHSESWFMPVNENNFPDWERTKLDLPLQCYNWTLTLGNKWKTFFETVHIYLRSRIKSNGPNGNESIYYEPLEFIDPSRNLGYMKINNIQVFGYSMHFDPEAIRDLILQLDYPYTQGSQDSALLQLLEIRDRVNKLSPPGQRRLDLFSCLLRHRLKLSTSEVVRIQSALQAFNAKLPNTVDYDTTKLCS
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(1816849..1817965,1853364..1853586,1869757..1869993,1874283..1874388,1892335..1892525,1901847..1902037,1999579..1999814))
location: region:1816849-1999814:-1
so has part: feature:1999579-1999814:-1:exon
so has part: feature:1901847-1902037:-1:exon
so has part: feature:1892335-1892525:-1:exon
so has part: feature:1874283-1874388:-1:exon
so has part: feature:1869757-1869993:-1:exon
so has part: feature:1853364-1853586:-1:exon
so has part: feature:1816849-1817965:-1:exon

XP_010713846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1999579-1999814:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1901847-1902037:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1892335-1892525:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1874283-1874388:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1869757-1869993:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1853364-1853586:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1816849-1817965:-1:exon

BRINP3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: BRINP3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BMP/retinoic acid-inducible neural-specific protein 3 isoform X2
translation: MPQAPSTGSSLIRDPSIVHRNTQILWTEVDRDLAQDTRFTGEESLTIFVDKRKLSKRSDGSDPSTNSSVVTLETLHQLAASYFIDRDSTLRRLHHIQIASTAIKVTETRTGPLGCSNYDNLDSVSSVLVQSPENKIQLQGLQVILPEYLQEHFVQAALSYIACNSEGEFICKDNDCWCQCGPKFPECNCPYMDIQAMEENLLRISETWNAYNSEFEESDEFKLFMKRLPMNYFLNTTTVMHLWTMDSNFQRRYEQLENSMKQLFLKAQKIVHKLFGLSKRCHKQPLIRMPKQRSSNYWLNRIQSFLYCNENGLLGSFSEETHTCTCPNDQVACHGFLPCTVGDGSACLSCAPDNRTRCGSCNAGYMLSQGICKPEVAESTEHYIGFETDLQDLEMKYLLQKTDRRIEVHAIFISNDMRLNNWFDPSWRKRMLLTLKSNKYKSSLVHMILGLSLQICLTKNSTLEPVLAVYVNPFGGSHSESWFMPVNENNFPDWERTKLDLPLQCYNWTLTLGNKWKTFFETVHIYLRSRIKSNGPNGNESIYYEPLEFIDPSRNLGYMKINNIQVFGYSMHFDPEAIRDLILQLDYPYTQGSQDSALLQLLEIRDRVNKLSPPGQRRLDLFSCLLRHRLKLSTSEVVRIQSALQAFNAKLPNTVDYDTTKLCS
SIO_010081: BRINP3
subclass of: SO_0000673
so part of: BRINP3
location: complement(join(1816849..1817965,1853364..1853586,1869757..1869993,1874283..1874388,1892335..1892525,1999579..1999699))
location: region:1816849-1999699:-1
so has part: feature:1999579-1999699:-1:exon
so has part: feature:1892335-1892525:-1:exon
so has part: feature:1874283-1874388:-1:exon
so has part: feature:1869757-1869993:-1:exon
so has part: feature:1853364-1853586:-1:exon
so has part: feature:1816849-1817965:-1:exon

XP_019473972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1999579-1999699:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1892335-1892525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1874283-1874388:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1869757-1869993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1853364-1853586:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1816849-1817965:-1:exon

LOC104912241
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2015121..2026989
location: region:2015121-2026989:1
so has part: feature:2015121-2026989:1:exon
subclass of: SO_0000011

104912241
type: Gene
SIO_000068: ncbigene

position:2015121:1
position: 2015121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2026989:1
position: 2026989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2015121-2026989:1:exon

LOC104912241
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912241
product: uncharacterized LOC104912241, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_794490.3
SIO_010081: LOC104912241
subclass of: SO_0000673
so part of: LOC104912241
location: join(2015121..2015367,2017113..2017204,2021017..2021123,2023545..2023662,2024822..2026988)
location: region:2015121-2026988:1
so has part: feature:2015121-2015367:1:exon
so has part: feature:2017113-2017204:1:exon
so has part: feature:2021017-2021123:1:exon
so has part: feature:2023545-2023662:1:exon
so has part: feature:2024822-2026988:1:exon

position:2026988:1
position: 2026988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2015121-2015367:1:exon

position:2015367:1
position: 2015367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2017113-2017204:1:exon

position:2017113:1
position: 2017113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2017204:1
position: 2017204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2021017-2021123:1:exon

position:2021017:1
position: 2021017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2021123:1
position: 2021123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2023545-2023662:1:exon

position:2023545:1
position: 2023545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2023662:1
position: 2023662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2024822-2026988:1:exon

position:2024822:1
position: 2024822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912241
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912241
product: uncharacterized LOC104912241, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_794491.3
SIO_010081: LOC104912241
subclass of: SO_0000673
so part of: LOC104912241
location: join(2016832..2016976,2017113..2017204,2021017..2021123,2023545..2023662,2024822..2026989)
location: region:2016832-2026989:1
so has part: feature:2016832-2016976:1:exon
so has part: feature:2017113-2017204:1:exon
so has part: feature:2021017-2021123:1:exon
so has part: feature:2023545-2023662:1:exon
so has part: feature:2024822-2026989:1:exon

position:2016832:1
position: 2016832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2016832-2016976:1:exon

position:2016976:1
position: 2016976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2017113-2017204:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2021017-2021123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2023545-2023662:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2024822-2026989:1:exon

LOC104912241
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912241
product: uncharacterized LOC104912241, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_794489.2
SIO_010081: LOC104912241
subclass of: SO_0000673
so part of: LOC104912241
location: join(2016832..2017204,2021017..2021123,2023545..2023662,2024822..2025085)
location: region:2016832-2025085:1
so has part: feature:2016832-2017204:1:exon
so has part: feature:2021017-2021123:1:exon
so has part: feature:2023545-2023662:1:exon
so has part: feature:2024822-2025085:1:exon

position:2025085:1
position: 2025085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2016832-2017204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2021017-2021123:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2023545-2023662:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2024822-2025085:1:exon

LOC109369138
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2034686..2038102
location: region:2034686-2038102:1
so has part: feature:2034686-2038102:1:exon
subclass of: SO_0000011

109369138
type: Gene
SIO_000068: ncbigene

position:2034686:1
position: 2034686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2038102:1
position: 2038102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2034686-2038102:1:exon

LOC109369138
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369138
product: uncharacterized LOC109369138
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004160835.1
SIO_010081: LOC109369138
subclass of: SO_0000673
so part of: LOC109369138
location: join(2034686..2035324,2036007..2036059,2036758..2038102)
location: region:2034686-2038102:1
so has part: feature:2034686-2035324:1:exon
so has part: feature:2036007-2036059:1:exon
so has part: feature:2036758-2038102:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2034686-2035324:1:exon

position:2035324:1
position: 2035324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2036007-2036059:1:exon

position:2036007:1
position: 2036007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2036059:1
position: 2036059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2036758-2038102:1:exon

position:2036758:1
position: 2036758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2148045..2148144
location: region:2148045-2148144:1
so has part: feature:2148045-2148144:1:region

position:2148045:1
position: 2148045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2148144:1
position: 2148144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2148045-2148144:1:region

RNF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2151417..2165783)
location: region:2151417-2165783:-1
so has part: feature:2151417-2165783:-1:exon
subclass of: SO_0000010

100550245
type: Gene
SIO_000068: ncbigene

position:2151417:-1
position: 2151417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2165783:-1
position: 2165783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2151417-2165783:-1:exon

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF2
product: ring finger protein 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019618433.2
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2151417..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157128,2165700..2165783))
location: region:2151417-2165783:-1
so has part: feature:2165700-2165783:-1:exon
so has part: feature:2157040-2157128:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2151417-2152472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2165700-2165783:-1:exon

position:2165700:-1
position: 2165700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2157040-2157128:-1:exon

position:2157040:-1
position: 2157040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2157128:-1
position: 2157128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2156677-2156837:-1:exon

position:2156677:-1
position: 2156677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2156837:-1
position: 2156837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2155690-2155905:-1:exon

position:2155690:-1
position: 2155690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2155905:-1
position: 2155905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2154652-2154924:-1:exon

position:2154652:-1
position: 2154652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2154924:-1
position: 2154924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2153410-2153581:-1:exon

position:2153410:-1
position: 2153410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2153581:-1
position: 2153581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2151417-2152472:-1:exon

position:2152472:-1
position: 2152472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF2
product: ring finger protein 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031554748.1
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2151417..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157128,2160386..2160589,2160936..2161024,2165700..2165768))
location: region:2151417-2165768:-1
so has part: feature:2165700-2165768:-1:exon
so has part: feature:2160936-2161024:-1:exon
so has part: feature:2160386-2160589:-1:exon
so has part: feature:2157040-2157128:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2151417-2152472:-1:exon

position:2165768:-1
position: 2165768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2165700-2165768:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2160936-2161024:-1:exon

position:2160936:-1
position: 2160936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2161024:-1
position: 2161024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2160386-2160589:-1:exon

position:2160386:-1
position: 2160386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2160589:-1
position: 2160589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2157040-2157128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2151417-2152472:-1:exon

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF2
product: ring finger protein 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019618431.2
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2151417..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157128,2160386..2160589,2160936..2161024,2161724..2162351))
location: region:2151417-2162351:-1
so has part: feature:2161724-2162351:-1:exon
so has part: feature:2160936-2161024:-1:exon
so has part: feature:2160386-2160589:-1:exon
so has part: feature:2157040-2157128:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2151417-2152472:-1:exon

position:2162351:-1
position: 2162351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2161724-2162351:-1:exon

position:2161724:-1
position: 2161724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2160936-2161024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2160386-2160589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2157040-2157128:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2151417-2152472:-1:exon

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF2
product: ring finger protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_031554745.1
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2151417..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157128,2160936..2162351))
location: region:2151417-2162351:-1
so has part: feature:2160936-2162351:-1:exon
so has part: feature:2157040-2157128:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2151417-2152472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160936-2162351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2157040-2157128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2151417-2152472:-1:exon

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF2
product: ring finger protein 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031554747.1
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2151417..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157128,2158146..2158214,2160936..2162351))
location: region:2151417-2162351:-1
so has part: feature:2160936-2162351:-1:exon
so has part: feature:2158146-2158214:-1:exon
so has part: feature:2157040-2157128:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2151417-2152472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160936-2162351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2158146-2158214:-1:exon

position:2158146:-1
position: 2158146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2158214:-1
position: 2158214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2157040-2157128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2151417-2152472:-1:exon

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF2
product: ring finger protein 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031554746.1
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2151417..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157128,2160386..2160513,2160936..2162351))
location: region:2151417-2162351:-1
so has part: feature:2160936-2162351:-1:exon
so has part: feature:2160386-2160513:-1:exon
so has part: feature:2157040-2157128:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2151417-2152472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2160936-2162351:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2160386-2160513:-1:exon

position:2160513:-1
position: 2160513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2157040-2157128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2151417-2152472:-1:exon

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF2
product: ring finger protein 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031554749.1
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2151417..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157128,2158146..2158269,2158400..2159040))
location: region:2151417-2159040:-1
so has part: feature:2158400-2159040:-1:exon
so has part: feature:2158146-2158269:-1:exon
so has part: feature:2157040-2157128:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2151417-2152472:-1:exon

position:2159040:-1
position: 2159040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2158400-2159040:-1:exon

position:2158400:-1
position: 2158400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2158146-2158269:-1:exon

position:2158269:-1
position: 2158269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2157040-2157128:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2151417-2152472:-1:exon

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF2
product: ring finger protein 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_031554744.1
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2151417..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157128,2158146..2159040))
location: region:2151417-2159040:-1
so has part: feature:2158146-2159040:-1:exon
so has part: feature:2157040-2157128:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2151417-2152472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2158146-2159040:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2157040-2157128:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2151417-2152472:-1:exon

RNF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: RNF2
product: ring finger protein 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 133 samples with support for all annotated introns
transcript id: XM_019618429.2
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2151417..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2158132))
location: region:2151417-2158132:-1
so has part: feature:2157040-2158132:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2151417-2152472:-1:exon

position:2158132:-1
position: 2158132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2157040-2158132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2151417-2152472:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X1
translation: MEFCKIVMAGEFLQCLWSGAVTGICSASVVSCCVSVLWALRLQGLEPWGTDHLEEGLLGREGSWFWSQVHLTMSFCSLLLSAMSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2152371..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157372))
location: region:2152371-2157372:-1
so has part: feature:2157040-2157372:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2152371-2152472:-1:exon

XP_019473974.1
type: Protein
SIO_000068: ncbiprotein

position:2152371:-1
position: 2152371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2157372:-1
position: 2157372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2157040-2157372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2152371-2152472:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2152371..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157126))
location: region:2152371-2157126:-1
so has part: feature:2157040-2157126:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2152371-2152472:-1:exon

XP_019473976.1
type: Protein
SIO_000068: ncbiprotein

position:2157126:-1
position: 2157126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2157040-2157126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2152371-2152472:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2152371..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157126))
location: region:2152371-2157126:-1
so has part: feature:2157040-2157126:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2152371-2152472:-1:exon

XP_019473978.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2157040-2157126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2152371-2152472:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2152371..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157126))
location: region:2152371-2157126:-1
so has part: feature:2157040-2157126:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2152371-2152472:-1:exon

XP_031410604.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2157040-2157126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2152371-2152472:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2152371..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157126))
location: region:2152371-2157126:-1
so has part: feature:2157040-2157126:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2152371-2152472:-1:exon

XP_031410605.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2157040-2157126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2152371-2152472:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2152371..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157126))
location: region:2152371-2157126:-1
so has part: feature:2157040-2157126:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2152371-2152472:-1:exon

XP_031410606.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2157040-2157126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2152371-2152472:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2152371..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157126))
location: region:2152371-2157126:-1
so has part: feature:2157040-2157126:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2152371-2152472:-1:exon

XP_031410607.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2157040-2157126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2152371-2152472:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2152371..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157126))
location: region:2152371-2157126:-1
so has part: feature:2157040-2157126:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2152371-2152472:-1:exon

XP_031410608.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2157040-2157126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2152371-2152472:-1:exon

RNF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: RNF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RING2 isoform X2
translation: MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLELDNNNTAVAIDPVLDGASEIELVFRPHPTLMENDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATANGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK
SIO_010081: RNF2
subclass of: SO_0000673
so part of: RNF2
location: complement(join(2152371..2152472,2153410..2153581,2154652..2154924,2155690..2155905,2156677..2156837,2157040..2157126))
location: region:2152371-2157126:-1
so has part: feature:2157040-2157126:-1:exon
so has part: feature:2156677-2156837:-1:exon
so has part: feature:2155690-2155905:-1:exon
so has part: feature:2154652-2154924:-1:exon
so has part: feature:2153410-2153581:-1:exon
so has part: feature:2152371-2152472:-1:exon

XP_031410609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2157040-2157126:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2156677-2156837:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2155690-2155905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2154652-2154924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2153410-2153581:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2152371-2152472:-1:exon

LOC100550703
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100550703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2186557..2245049
location: region:2186557-2245049:1
so has part: feature:2186557-2245049:1:exon
subclass of: SO_0000010

100550703
type: Gene
SIO_000068: ncbigene

position:2186557:1
position: 2186557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2245049:1
position: 2245049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2186557-2245049:1:exon

LOC100550703
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100550703
product: protein Niban 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 125 samples with support for all annotated introns
transcript id: XM_010715548.2
SIO_010081: LOC100550703
subclass of: SO_0000673
so part of: LOC100550703
location: join(2186557..2186623,2208920..2209050,2210462..2210593,2211284..2211398,2212735..2212902,2228373..2228488,2233690..2233794,2233884..2234046,2234649..2234836,2235037..2235198,2237955..2238065,2238613..2238720,2240484..2240595,2241525..2245049)
location: region:2186557-2245049:1
so has part: feature:2186557-2186623:1:exon
so has part: feature:2208920-2209050:1:exon
so has part: feature:2210462-2210593:1:exon
so has part: feature:2211284-2211398:1:exon
so has part: feature:2212735-2212902:1:exon
so has part: feature:2228373-2228488:1:exon
so has part: feature:2233690-2233794:1:exon
so has part: feature:2233884-2234046:1:exon
so has part: feature:2234649-2234836:1:exon
so has part: feature:2235037-2235198:1:exon
so has part: feature:2237955-2238065:1:exon
so has part: feature:2238613-2238720:1:exon
so has part: feature:2240484-2240595:1:exon
so has part: feature:2241525-2245049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2186557-2186623:1:exon

position:2186623:1
position: 2186623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2208920-2209050:1:exon

position:2208920:1
position: 2208920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2209050:1
position: 2209050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2210462-2210593:1:exon

position:2210462:1
position: 2210462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2210593:1
position: 2210593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2211284-2211398:1:exon

position:2211284:1
position: 2211284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2211398:1
position: 2211398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2212735-2212902:1:exon

position:2212735:1
position: 2212735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2212902:1
position: 2212902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2228373-2228488:1:exon

position:2228373:1
position: 2228373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2228488:1
position: 2228488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2233690-2233794:1:exon

position:2233690:1
position: 2233690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2233794:1
position: 2233794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2233884-2234046:1:exon

position:2233884:1
position: 2233884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2234046:1
position: 2234046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2234649-2234836:1:exon

position:2234649:1
position: 2234649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2234836:1
position: 2234836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2235037-2235198:1:exon

position:2235037:1
position: 2235037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2235198:1
position: 2235198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2237955-2238065:1:exon

position:2237955:1
position: 2237955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2238065:1
position: 2238065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2238613-2238720:1:exon

position:2238613:1
position: 2238613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2238720:1
position: 2238720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2240484-2240595:1:exon

position:2240484:1
position: 2240484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2240595:1
position: 2240595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2241525-2245049:1:exon

position:2241525:1
position: 2241525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100550703
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100550703
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Niban 1
translation: MGGSASGPLDDSKCAYIRGKTEAIIKNFSPHYKRQYAVAFCKHVQDELEQHRNSQSQFLKTRPKSEAETVLYETELLHFAEDVKKWKDRYVVIKNDYTVDCFETKEAYQKGLSPKHHIVPAGGKVLTLEEDYNLLSDKHFPDPVGLSEKETAQAFVQLPREFPVYLWQPFARHSYYCFQEPEAQRQFSAVLSDCVRHSNYDFLKQTTYEVEAFLEAIQFFRQEKGHYGTWEMITGNEKEILSNLVMEELLPNLQTMILPKMKGKRNDRKRAWFGFVEEAYGLVQQQVAEGLSTLKEECRDFAKTLEGTIRSDMDQILNSKNFLAGKIKASVSEPAQKCCTENIQPFLTSILEELMGPVSSGFTEVRSLFDKEVNEIIQNFQKTNDTTKLKEDVDQLMNLPFNSVKMEPSYLKVNLLQELLHDLKSRFKVYHVDFVVQRTQNFMQELMENAVYTFEQLFSPSRQADSMKVATTLEKVKQRVLKQYDYDSSTVRKKIFQEALVQITLPTMQKTLASTCKPELQKYEQFIFADYTSVIQVENVYEEILYQMLLEETLKVIKEAAVLKKHNLFEDNLNLPCESVSSLTDLKTPSGSAQTTPAKKPSTTRMEASDTETQSEETLIVTEKILWEKDHEDKKPSDKEAVISVNMDGSQASKSEEVVVTDISEKQESLSTTPTKQELAEGNTPLENESVVKADSVGDTEKKPKTQEEAVEEEVAYGTENTLRDVSPEKELKVHEKAVEEKVTSEKESKVNEEGVQIEPTSPPCKTAETEILGSAEMKIEIEKGVTEELSQSENEAGTGFEKDSKEKSKDQGASTEISVASQDEHTGKGASGDNPEKESKTEVMNCEPLDGVNEIRNLLMVTVELPADTPPEQVKEICEAEIVKLQEYEGNKEISETAAAEVEESQTMVNKDAAECTKFKEDQLSSSSRGTDGTSIGNVSKVGRSVGQAEWLVEISDTPQEVKSEVEIKQSVWYTDAGGCDSDRLHPEEHAENASEDKRLSGEEGGVGNSHAGLVEVGTESFSHKPAENPDATQVPILNREEPRTGLVDVPFLSVAEPDKASAVQVTAGAGPAESEGKPEDESSSHVEIKSSEVNNVFTQENREDSSVQQSPEE
SIO_010081: LOC100550703
subclass of: SO_0000673
so part of: LOC100550703
location: join(2186569..2186623,2208920..2209050,2210462..2210593,2211284..2211398,2212735..2212902,2228373..2228488,2233690..2233794,2233884..2234046,2234649..2234836,2235037..2235198,2237955..2238065,2238613..2238720,2240484..2240595,2241525..2243206)
location: region:2186569-2243206:1
so has part: feature:2186569-2186623:1:exon
so has part: feature:2208920-2209050:1:exon
so has part: feature:2210462-2210593:1:exon
so has part: feature:2211284-2211398:1:exon
so has part: feature:2212735-2212902:1:exon
so has part: feature:2228373-2228488:1:exon
so has part: feature:2233690-2233794:1:exon
so has part: feature:2233884-2234046:1:exon
so has part: feature:2234649-2234836:1:exon
so has part: feature:2235037-2235198:1:exon
so has part: feature:2237955-2238065:1:exon
so has part: feature:2238613-2238720:1:exon
so has part: feature:2240484-2240595:1:exon
so has part: feature:2241525-2243206:1:exon

XP_010713850.1
type: Protein
SIO_000068: ncbiprotein

position:2186569:1
position: 2186569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2243206:1
position: 2243206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2186569-2186623:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2208920-2209050:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2210462-2210593:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2211284-2211398:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2212735-2212902:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2228373-2228488:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2233690-2233794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2233884-2234046:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2234649-2234836:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2235037-2235198:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2237955-2238065:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2238613-2238720:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2240484-2240595:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2241525-2243206:1:exon

EDEM3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: EDEM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2247980..2275576
location: region:2247980-2275576:1
so has part: feature:2247980-2275576:1:exon
subclass of: SO_0000010

100550857
type: Gene
SIO_000068: ncbigene

position:2247980:1
position: 2247980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2275576:1
position: 2275576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2247980-2275576:1:exon

EDEM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EDEM3
product: ER degradation enhancing alpha-mannosidase like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031554944.1
SIO_010081: EDEM3
subclass of: SO_0000673
so part of: EDEM3
location: join(2247980..2248016,2248513..2248631,2251919..2252019,2254293..2254332,2255673..2255785,2256460..2256613,2257581..2257715,2258900..2259005,2259564..2259661,2260702..2260827,2261366..2261449,2262554..2262637,2263157..2263281,2264294..2264459,2267150..2267304,2268069..2268222,2268805..2268999,2269747..2269912,2270365..2270550,2272065..2275576)
location: region:2247980-2275576:1
so has part: feature:2247980-2248016:1:exon
so has part: feature:2248513-2248631:1:exon
so has part: feature:2251919-2252019:1:exon
so has part: feature:2254293-2254332:1:exon
so has part: feature:2255673-2255785:1:exon
so has part: feature:2256460-2256613:1:exon
so has part: feature:2257581-2257715:1:exon
so has part: feature:2258900-2259005:1:exon
so has part: feature:2259564-2259661:1:exon
so has part: feature:2260702-2260827:1:exon
so has part: feature:2261366-2261449:1:exon
so has part: feature:2262554-2262637:1:exon
so has part: feature:2263157-2263281:1:exon
so has part: feature:2264294-2264459:1:exon
so has part: feature:2267150-2267304:1:exon
so has part: feature:2268069-2268222:1:exon
so has part: feature:2268805-2268999:1:exon
so has part: feature:2269747-2269912:1:exon
so has part: feature:2270365-2270550:1:exon
so has part: feature:2272065-2275576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2247980-2248016:1:exon

position:2248016:1
position: 2248016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2248513-2248631:1:exon

position:2248513:1
position: 2248513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2248631:1
position: 2248631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2251919-2252019:1:exon

position:2251919:1
position: 2251919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2252019:1
position: 2252019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2254293-2254332:1:exon

position:2254293:1
position: 2254293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2254332:1
position: 2254332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2255673-2255785:1:exon

position:2255673:1
position: 2255673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2255785:1
position: 2255785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2256460-2256613:1:exon

position:2256460:1
position: 2256460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2256613:1
position: 2256613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2257581-2257715:1:exon

position:2257581:1
position: 2257581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2257715:1
position: 2257715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2258900-2259005:1:exon

position:2258900:1
position: 2258900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2259005:1
position: 2259005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2259564-2259661:1:exon

position:2259564:1
position: 2259564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2259661:1
position: 2259661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2260702-2260827:1:exon

position:2260702:1
position: 2260702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2260827:1
position: 2260827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2261366-2261449:1:exon

position:2261366:1
position: 2261366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2261449:1
position: 2261449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2262554-2262637:1:exon

position:2262554:1
position: 2262554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2262637:1
position: 2262637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2263157-2263281:1:exon

position:2263157:1
position: 2263157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2263281:1
position: 2263281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2264294-2264459:1:exon

position:2264294:1
position: 2264294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2264459:1
position: 2264459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2267150-2267304:1:exon

position:2267150:1
position: 2267150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2267304:1
position: 2267304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2268069-2268222:1:exon

position:2268069:1
position: 2268069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2268222:1
position: 2268222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2268805-2268999:1:exon

position:2268805:1
position: 2268805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2268999:1
position: 2268999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2269747-2269912:1:exon

position:2269747:1
position: 2269747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2269912:1
position: 2269912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2270365-2270550:1:exon

position:2270365:1
position: 2270365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2270550:1
position: 2270550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2272065-2275576:1:exon

position:2272065:1
position: 2272065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EDEM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EDEM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ER degradation-enhancing alpha-mannosidase-like protein 3
translation: MPFCLAGLLCLTDGILKDIVEQTTNAFFFSPLALFFRNQVLEMFDHAYSNYMDHAYPADELMPLTCRGRVRGQEPSRGDVDDALGKFSLTLIDTLDTLVVLNKTKEFEEAVKKVIKDVNLDNDIVVSVFETNIRVLGGLLGGHSVAIMLKDKGEYMQWYNGELLHMAKELGYKLLPAFNTTSGLPYPRVNLKFGVRHPEARTGTETDTCTACAGTLILEFAALSRFTGTSIFEEYARKALDFIWEKRQRSSNLVGVTINIHTGDWVRKDSGVGAGIDSYYEYLLKAYVLLGDDSFLERFNTHYDAIMKYISQPPLLLDVHIHKPMLNARTWMDSLLAFFPGLQVLKGDIRPAIETHEMLYQVIKKHNFLPEAFTTDFRVHWAQHPLRPEFAESTYFLYKATGDPYYLEVGKTLIENLNKYARVPCGFAAMKDVRTGSHEDRMDSFFLAEMFKYLYLLFADKEDMIFDIEDYIFTTEAHLLPLWLSTTNQTISKKNTTTEYTELDDSNFDWTCPNTQILFPNDPMFAQSIREPLKNVVDKSCPRSISRAEESLGSGPKPPLRARDFMASNPEHLEILKKMGVSLIHLKDGRVQLVQHAVQAASSLDAEDGLRFMQEMIELSSQQQKEQQLPPRAVQIVSHPFFGRVVLTAGPAQFGMDLSKHKSGTRGFVATIKPYNGCSEITNPEAVKEKIALMQRGQCMFAEKARNIQKAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKNTDDITIPMLFLFNKEGNIILDAIREYEAVEVLLSDKAKDRDLEMENMDQKLSENDSHKQNSEEASSASQDVGTVSEEPEEGESSDISDPDSLSPAQADSDSISTSDQDSSIPGPGEADASEPACTQGDEQPQEQQTETESDSKVNWDNRVQPMESILADWNEDIEAFEMMEKDEL
SIO_010081: EDEM3
subclass of: SO_0000673
so part of: EDEM3
location: join(2247980..2248016,2248513..2248631,2251919..2252019,2254293..2254332,2255673..2255785,2256460..2256613,2257581..2257715,2258900..2259005,2259564..2259661,2260702..2260827,2261366..2261449,2262554..2262637,2263157..2263281,2264294..2264459,2267150..2267304,2268069..2268222,2268805..2268999,2269747..2269912,2270365..2270550,2272065..2272471)
location: region:2247980-2272471:1
so has part: feature:2247980-2248016:1:exon
so has part: feature:2248513-2248631:1:exon
so has part: feature:2251919-2252019:1:exon
so has part: feature:2254293-2254332:1:exon
so has part: feature:2255673-2255785:1:exon
so has part: feature:2256460-2256613:1:exon
so has part: feature:2257581-2257715:1:exon
so has part: feature:2258900-2259005:1:exon
so has part: feature:2259564-2259661:1:exon
so has part: feature:2260702-2260827:1:exon
so has part: feature:2261366-2261449:1:exon
so has part: feature:2262554-2262637:1:exon
so has part: feature:2263157-2263281:1:exon
so has part: feature:2264294-2264459:1:exon
so has part: feature:2267150-2267304:1:exon
so has part: feature:2268069-2268222:1:exon
so has part: feature:2268805-2268999:1:exon
so has part: feature:2269747-2269912:1:exon
so has part: feature:2270365-2270550:1:exon
so has part: feature:2272065-2272471:1:exon

XP_031410804.1
type: Protein
SIO_000068: ncbiprotein

position:2272471:1
position: 2272471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2247980-2248016:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2248513-2248631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2251919-2252019:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2254293-2254332:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2255673-2255785:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2256460-2256613:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2257581-2257715:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2258900-2259005:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2259564-2259661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2260702-2260827:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2261366-2261449:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2262554-2262637:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2263157-2263281:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2264294-2264459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2267150-2267304:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2268069-2268222:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2268805-2268999:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2269747-2269912:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2270365-2270550:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2272065-2272471:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2317013..2317112
location: region:2317013-2317112:1
so has part: feature:2317013-2317112:1:region

position:2317013:1
position: 2317013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2317112:1
position: 2317112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2317013-2317112:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2317606..2317705
location: region:2317606-2317705:1
so has part: feature:2317606-2317705:1:region

position:2317606:1
position: 2317606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2317705:1
position: 2317705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2317606-2317705:1:region

LOC100540951
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100540951
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2336878..2357809
location: region:2336878-2357809:1
so has part: feature:2336878-2357809:1:exon
subclass of: SO_0000010

100540951
type: Gene
SIO_000068: ncbigene

position:2336878:1
position: 2336878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2357809:1
position: 2357809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2336878-2357809:1:exon

LOC100540951
type: Constant Region
subclass of: SO_0001834
RO_0002162: 9103
gene: LOC100540951
standard name: T cell receptor delta constant-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
SIO_010081: LOC100540951
subclass of: SO_0000673
so part of: LOC100540951
location: join(2337070..2337384,2355326..2355607,2356275..2356337,2356785..2356897,2357295..2357809)
location: region:2337070-2357809:1
so has part: feature:2337070-2337384:1:exon
so has part: feature:2355326-2355607:1:exon
so has part: feature:2356275-2356337:1:exon
so has part: feature:2356785-2356897:1:exon
so has part: feature:2357295-2357809:1:exon

position:2337070:1
position: 2337070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337070-2337384:1:exon

position:2337384:1
position: 2337384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2355326-2355607:1:exon

position:2355326:1
position: 2355326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2355607:1
position: 2355607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2356275-2356337:1:exon

position:2356275:1
position: 2356275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2356337:1
position: 2356337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2356785-2356897:1:exon

position:2356785:1
position: 2356785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2356897:1
position: 2356897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2357295-2357809:1:exon

position:2357295:1
position: 2357295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100540951
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100540951
exception: rearrangement required for product
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T cell receptor delta constant-like isoform X2
SIO_010081: LOC100540951
subclass of: SO_0000673
so part of: LOC100540951
location: join(2337312..2337384,2355326..2355607,2356275..2356337,2356785..2356897,2357295..2357309)
location: region:2337312-2357309:1
so has part: feature:2337312-2337384:1:exon
so has part: feature:2355326-2355607:1:exon
so has part: feature:2356275-2356337:1:exon
so has part: feature:2356785-2356897:1:exon
so has part: feature:2357295-2357309:1:exon

position:2337312:1
position: 2337312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2357309:1
position: 2357309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2337312-2337384:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2355326-2355607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2356275-2356337:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2356785-2356897:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2357295-2357309:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2364642..2364741
location: region:2364642-2364741:1
so has part: feature:2364642-2364741:1:region

position:2364642:1
position: 2364642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2364741:1
position: 2364741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2364642-2364741:1:region

LOC109369139
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2365054..>2365368)
location: region:2365054-2365368:-1
so has part: feature:2365054-2365368:-1:exon
subclass of: SO_0000010

109369139
type: Gene
SIO_000068: ncbigene

position:2365054:-1
position: 2365054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2365368:-1
position: 2365368
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365054-2365368:-1:exon

LOC109369139
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC109369139
product: retinol dehydrogenase 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019618419.2
SIO_010081: LOC109369139
subclass of: SO_0000673
so part of: LOC109369139
location: complement(2365054..>2365368)
location: region:2365054-2365368:-1
so has part: feature:2365054-2365368:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2365054-2365368:-1:exon

LOC109369139
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC109369139
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinol dehydrogenase 5-like
translation: QPQPDLKVQRLIMNVICDADLGKVTRCMEHALGACHPRTRYSAGWDAKLLWLPASYLPACIVDFVLATILPKPAHHVR
SIO_010081: LOC109369139
subclass of: SO_0000673
so part of: LOC109369139
location: complement(2365132..>2365368)
location: region:2365132-2365368:-1
so has part: feature:2365132-2365368:-1:exon

XP_019473964.1
type: Protein
SIO_000068: ncbiprotein

position:2365132:-1
position: 2365132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365132-2365368:-1:exon

LOC109369187
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2365556..2370833
location: region:2365556-2370833:1
so has part: feature:2365556-2370833:1:exon
subclass of: SO_0000011

109369187
type: Gene
SIO_000068: ncbigene

position:2365556:1
position: 2365556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2370833:1
position: 2370833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2365556-2370833:1:exon

LOC109369187
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369187
product: uncharacterized LOC109369187
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XR_002117871.2
SIO_010081: LOC109369187
subclass of: SO_0000673
so part of: LOC109369187
location: join(2365556..2369225,2370587..2370833)
location: region:2365556-2370833:1
so has part: feature:2365556-2369225:1:exon
so has part: feature:2370587-2370833:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2365556-2369225:1:exon

position:2369225:1
position: 2369225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2370587-2370833:1:exon

position:2370587:1
position: 2370587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ORMDL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ORMDL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2376414..2379403)
location: region:2376414-2379403:-1
so has part: feature:2376414-2379403:-1:exon
subclass of: SO_0000010

100551161
type: Gene
SIO_000068: ncbigene

position:2376414:-1
position: 2376414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2379403:-1
position: 2379403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2376414-2379403:-1:exon

ORMDL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ORMDL2
product: ORMDL sphingolipid biosynthesis regulator 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010715551.3
SIO_010081: ORMDL2
subclass of: SO_0000673
so part of: ORMDL2
location: complement(join(2376414..2376957,2377196..2377347,2378131..2378305,2379301..2379403))
location: region:2376414-2379403:-1
so has part: feature:2379301-2379403:-1:exon
so has part: feature:2378131-2378305:-1:exon
so has part: feature:2377196-2377347:-1:exon
so has part: feature:2376414-2376957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2379301-2379403:-1:exon

position:2379301:-1
position: 2379301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2378131-2378305:-1:exon

position:2378131:-1
position: 2378131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2378305:-1
position: 2378305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2377196-2377347:-1:exon

position:2377196:-1
position: 2377196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2377347:-1
position: 2377347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2376414-2376957:-1:exon

position:2376957:-1
position: 2376957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ORMDL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ORMDL2
product: ORMDL sphingolipid biosynthesis regulator 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 155 samples with support for all annotated introns
transcript id: XM_010715552.3
SIO_010081: ORMDL2
subclass of: SO_0000673
so part of: ORMDL2
location: complement(join(2376414..2376957,2377196..2377347,2378131..2378305,2379158..2379245))
location: region:2376414-2379245:-1
so has part: feature:2379158-2379245:-1:exon
so has part: feature:2378131-2378305:-1:exon
so has part: feature:2377196-2377347:-1:exon
so has part: feature:2376414-2376957:-1:exon

position:2379245:-1
position: 2379245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2379158-2379245:-1:exon

position:2379158:-1
position: 2379158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2378131-2378305:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2377196-2377347:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2376414-2376957:-1:exon

ORMDL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ORMDL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ORM1-like protein 2
translation: MNVGVAHSEVNPNTRVMSSRGIWLAYVISVAVLHIILLSIPFFSIPVVWTLTNVIHNLVMYLLLHTVKGTPFETPDQGKDRLLTHWEQIDYGMQCTSSRKFLSISPVVLYLLTSFYTKYDPAHFMINTASLLSVLLPKLPQFHGVRVFGINKY
SIO_010081: ORMDL2
subclass of: SO_0000673
so part of: ORMDL2
location: complement(join(2376822..2376957,2377196..2377347,2378131..2378304))
location: region:2376822-2378304:-1
so has part: feature:2378131-2378304:-1:exon
so has part: feature:2377196-2377347:-1:exon
so has part: feature:2376822-2376957:-1:exon

XP_010713853.1
type: Protein
SIO_000068: ncbiprotein

position:2376822:-1
position: 2376822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2378304:-1
position: 2378304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2378131-2378304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377196-2377347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2376822-2376957:-1:exon

ORMDL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ORMDL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ORM1-like protein 2
translation: MNVGVAHSEVNPNTRVMSSRGIWLAYVISVAVLHIILLSIPFFSIPVVWTLTNVIHNLVMYLLLHTVKGTPFETPDQGKDRLLTHWEQIDYGMQCTSSRKFLSISPVVLYLLTSFYTKYDPAHFMINTASLLSVLLPKLPQFHGVRVFGINKY
SIO_010081: ORMDL2
subclass of: SO_0000673
so part of: ORMDL2
location: complement(join(2376822..2376957,2377196..2377347,2378131..2378304))
location: region:2376822-2378304:-1
so has part: feature:2378131-2378304:-1:exon
so has part: feature:2377196-2377347:-1:exon
so has part: feature:2376822-2376957:-1:exon

XP_010713854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2378131-2378304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2377196-2377347:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2376822-2376957:-1:exon

SARNP
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SARNP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2379556..2388127
location: region:2379556-2388127:1
so has part: feature:2379556-2388127:1:exon
subclass of: SO_0000010

100551314
type: Gene
SIO_000068: ncbigene

position:2379556:1
position: 2379556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2388127:1
position: 2388127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2379556-2388127:1:exon

SARNP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SARNP
product: SAP domain containing ribonucleoprotein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 213 samples with support for all annotated introns
transcript id: XM_010715553.3
SIO_010081: SARNP
subclass of: SO_0000673
so part of: SARNP
location: join(2379556..2379663,2380104..2380203,2380440..2380486,2382063..2382130,2383458..2383509,2385554..2385627,2385917..2385945,2386324..2386349,2387029..2388127)
location: region:2379556-2388127:1
so has part: feature:2379556-2379663:1:exon
so has part: feature:2380104-2380203:1:exon
so has part: feature:2380440-2380486:1:exon
so has part: feature:2382063-2382130:1:exon
so has part: feature:2383458-2383509:1:exon
so has part: feature:2385554-2385627:1:exon
so has part: feature:2385917-2385945:1:exon
so has part: feature:2386324-2386349:1:exon
so has part: feature:2387029-2388127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2379556-2379663:1:exon

position:2379663:1
position: 2379663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2380104-2380203:1:exon

position:2380104:1
position: 2380104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2380203:1
position: 2380203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2380440-2380486:1:exon

position:2380440:1
position: 2380440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2380486:1
position: 2380486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2382063-2382130:1:exon

position:2382063:1
position: 2382063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2382130:1
position: 2382130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2383458-2383509:1:exon

position:2383458:1
position: 2383458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383509:1
position: 2383509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2385554-2385627:1:exon

position:2385554:1
position: 2385554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2385627:1
position: 2385627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2385917-2385945:1:exon

position:2385917:1
position: 2385917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2385945:1
position: 2385945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2386324-2386349:1:exon

position:2386324:1
position: 2386324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386349:1
position: 2386349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2387029-2388127:1:exon

position:2387029:1
position: 2387029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SARNP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SARNP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SAP domain-containing ribonucleoprotein
translation: MAAETVELHKLKLAELKQECLARGLEAKGNKQDLINRLQAYLEEHAEEEANEEDVLGEEIEEEEQKPAEPPTKVEEPPVKSPDVSTEKKVVKITSEISQMERMQKRAERFNVPVSLESKKAARAARFGLATVSTKGLSADSKPTVNMDKLKERAQRFGLNVSSLSKKVRCIGLQDTLCTSRGAQGS
SIO_010081: SARNP
subclass of: SO_0000673
so part of: SARNP
location: join(2379628..2379663,2380104..2380203,2380440..2380486,2382063..2382130,2383458..2383509,2385554..2385627,2385917..2385945,2386324..2386349,2387029..2387157)
location: region:2379628-2387157:1
so has part: feature:2379628-2379663:1:exon
so has part: feature:2380104-2380203:1:exon
so has part: feature:2380440-2380486:1:exon
so has part: feature:2382063-2382130:1:exon
so has part: feature:2383458-2383509:1:exon
so has part: feature:2385554-2385627:1:exon
so has part: feature:2385917-2385945:1:exon
so has part: feature:2386324-2386349:1:exon
so has part: feature:2387029-2387157:1:exon

XP_010713855.1
type: Protein
SIO_000068: ncbiprotein

position:2379628:1
position: 2379628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2387157:1
position: 2387157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2379628-2379663:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2380104-2380203:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2380440-2380486:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2382063-2382130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2383458-2383509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2385554-2385627:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2385917-2385945:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2386324-2386349:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2387029-2387157:1:exon

DNAJC14
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DNAJC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2395618..>2397040
location: region:2395618-2397040:1
so has part: feature:2395618-2397040:1:exon
subclass of: SO_0000010

104912243
type: Gene
SIO_000068: ncbigene

position:2395618:1
position: 2395618
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2397040:1
position: 2397040
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2395618-2397040:1:exon

DNAJC14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DNAJC14
product: DnaJ heat shock protein family (Hsp40) member C14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010715554.1
SIO_010081: DNAJC14
subclass of: SO_0000673
so part of: DNAJC14
location: join(<2395618..2395944,2396024..2396130,2396267..2396386,2396473..2396633,2396707..2396809,2396932..>2397040)
location: region:2395618-2397040:1
so has part: feature:2395618-2395944:1:exon
so has part: feature:2396024-2396130:1:exon
so has part: feature:2396267-2396386:1:exon
so has part: feature:2396473-2396633:1:exon
so has part: feature:2396707-2396809:1:exon
so has part: feature:2396932-2397040:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2395618-2395944:1:exon

position:2395944:1
position: 2395944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2396024-2396130:1:exon

position:2396024:1
position: 2396024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2396130:1
position: 2396130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2396267-2396386:1:exon

position:2396267:1
position: 2396267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2396386:1
position: 2396386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2396473-2396633:1:exon

position:2396473:1
position: 2396473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2396633:1
position: 2396633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2396707-2396809:1:exon

position:2396707:1
position: 2396707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2396809:1
position: 2396809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2396932-2397040:1:exon

position:2396932:1
position: 2396932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DNAJC14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DNAJC14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dnaJ homolog subfamily C member 14
translation: RTRLAELLGSAVLRRTRGFLGVNGTWRRLWARWRRWRSAPEELRTGCGMGDAVPGCDVGAPGSSAEEVSRLLAMAEVPEEELNPFQALGVEMTASDAELRKAYRRLAVLVHPDKSEHPRAEEAFKVLRAAWDIVSSPEKRKEYEIKRMAESELSRSVSEFLSRLQDDLKEAMNTMMCSKCQGKHRRFEMDRDPLSARYCAECSQLHPAEEGDLWAESSLLGLKITYFAMMDGKVYDITEWAGCQRVGICPDTHRVPYHISFGVRSAGAGGRQRSTSKGSPSSAADLQDFFTRMFQGTSGQVPGGFPPPP
SIO_010081: DNAJC14
subclass of: SO_0000673
so part of: DNAJC14
location: join(<2395618..2395944,2396024..2396130,2396267..2396386,2396473..2396633,2396707..2396809,2396932..>2397040)
location: region:2395618-2397040:1
so has part: feature:2395618-2395944:1:exon
so has part: feature:2396024-2396130:1:exon
so has part: feature:2396267-2396386:1:exon
so has part: feature:2396473-2396633:1:exon
so has part: feature:2396707-2396809:1:exon
so has part: feature:2396932-2397040:1:exon

XP_010713856.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2395618-2395944:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2396024-2396130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2396267-2396386:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2396473-2396633:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2396707-2396809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2396932-2397040:1:exon

GLI1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2397149..2405104
location: region:2397149-2405104:1
so has part: feature:2397149-2405104:1:exon
subclass of: SO_0000010

100542662
type: Gene
SIO_000068: ncbigene

position:2397149:1
position: 2397149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2405104:1
position: 2405104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2397149-2405104:1:exon

GLI1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GLI1
product: GLI family zinc finger 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_019618434.2
SIO_010081: GLI1
subclass of: SO_0000673
so part of: GLI1
location: join(2397149..2397280,2397409..2397504,2397959..2398154,2398385..2398547,2398636..2398737,2398862..2399002,2399563..2399712,2400003..2400167,2400669..2400917,2401023..2401302,2402271..2405104)
location: region:2397149-2405104:1
so has part: feature:2397149-2397280:1:exon
so has part: feature:2397409-2397504:1:exon
so has part: feature:2397959-2398154:1:exon
so has part: feature:2398385-2398547:1:exon
so has part: feature:2398636-2398737:1:exon
so has part: feature:2398862-2399002:1:exon
so has part: feature:2399563-2399712:1:exon
so has part: feature:2400003-2400167:1:exon
so has part: feature:2400669-2400917:1:exon
so has part: feature:2401023-2401302:1:exon
so has part: feature:2402271-2405104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2397149-2397280:1:exon

position:2397280:1
position: 2397280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2397409-2397504:1:exon

position:2397409:1
position: 2397409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2397504:1
position: 2397504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2397959-2398154:1:exon

position:2397959:1
position: 2397959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398154:1
position: 2398154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2398385-2398547:1:exon

position:2398385:1
position: 2398385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398547:1
position: 2398547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2398636-2398737:1:exon

position:2398636:1
position: 2398636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398737:1
position: 2398737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2398862-2399002:1:exon

position:2398862:1
position: 2398862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2399002:1
position: 2399002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2399563-2399712:1:exon

position:2399563:1
position: 2399563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2399712:1
position: 2399712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2400003-2400167:1:exon

position:2400003:1
position: 2400003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400167:1
position: 2400167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2400669-2400917:1:exon

position:2400669:1
position: 2400669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2400917:1
position: 2400917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2401023-2401302:1:exon

position:2401023:1
position: 2401023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2401302:1
position: 2401302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2402271-2405104:1:exon

position:2402271:1
position: 2402271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GLI1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GLI1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein GLI1
translation: MFNPVTPQGPGYAEHCCPRPLHGPSVGTPGLQGLDFSVCHQPNLASSHHGYGLVPGTEHLGGADGSRFSTPRGAGKLGKKRALSISPLSDSSVDLQTVIRTSPNSLVAFINSRCASASGSYGHLSISTISPSLGYQNPPGQQKGQGQLFSHTPPLPPCSSHETLSSRPGLLHHTPAHGTLKHCQQLKLERSLSSPLTAKYPEEKSEGDISSPASTGTQDPLLGMLSVREDLEKEDGKPEFETIYETNCYWDGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGSVVPGHALPASGAPQDMKQEKNTNGPAEIRKDDSKLLVPDLASKPQPSPGGQSSCSSDRSPLGSTTNNDSGVEMTGNTGGSYEDLSTLEDVVPGEPMGTSGLMALQKLENLRIDKLKQMRKPSATKSLNLPAIPGAALPGDVPGVCVPPAASQRRIAELSAAELAVPPSERRSSATSTVSSAYTVSRRSSAASPYLLGPNLAGEAGTMPGCSDGYDCISPDELRRAGNANPCGALPGVGSLTPAQCYRLKAKYAAATGGPPPTPLPSVEPLGMGGHGSLPGDCLEPPVPSFFTNGLLRRHSSNDRYVSSLHPHLVPGNGVRRASDPARTAANPHAVPKVQRFKSVGNMNAPGGSRAALQPLGASDGNLQHRVFSPRPPSISENVYLESVNAEGPGPGTESGLLEMDPFLNYPEESFPCRGANVQLQCGGLYGSAQRAPGGGMQLNPGGHGEMEEGLLQPEFSLPQCQMNQHFPSLRAGSGAVPPQWEEPPQSNRLELSCGQPGVSAVAETQCQRHTALYPPPSHCVQHPRLMSTCQDGGFSDGHRLNCLQIKSEQRYSAPAPALTPCQNAKATQQPAFSQTVSGYRAEEQTPSGYVGVLSPRGRRAHTPALQAKEVMVRSYVQAQQALMWGEPPKGGEAGMGLGGESGQYQGTHAPPYLGPKYSGYQPKTNHLQGLVESPHLLSPPCFNPEMVPHPPSGAKPPEHQNSVGYGGNLAEPNPSYEAAGANPQRGLRLPPVHPAPEMPSDTLLCYPGQVGKGSHKLQGPPAASCGGLGHCTGSLGGNKGSSCFYPDSGQQAFNSLDSLDLENTHLDFAAIVEDAESSALLPGPPAPLGVSCCRHPAVPTWLWVT
SIO_010081: GLI1
subclass of: SO_0000673
so part of: GLI1
location: join(2397184..2397280,2397409..2397504,2397959..2398154,2398385..2398547,2398636..2398737,2398862..2399002,2399563..2399712,2400003..2400167,2400669..2400917,2401023..2401302,2402271..2404417)
location: region:2397184-2404417:1
so has part: feature:2397184-2397280:1:exon
so has part: feature:2397409-2397504:1:exon
so has part: feature:2397959-2398154:1:exon
so has part: feature:2398385-2398547:1:exon
so has part: feature:2398636-2398737:1:exon
so has part: feature:2398862-2399002:1:exon
so has part: feature:2399563-2399712:1:exon
so has part: feature:2400003-2400167:1:exon
so has part: feature:2400669-2400917:1:exon
so has part: feature:2401023-2401302:1:exon
so has part: feature:2402271-2404417:1:exon

XP_019473979.1
type: Protein
SIO_000068: ncbiprotein

position:2397184:1
position: 2397184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2404417:1
position: 2404417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2397184-2397280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2397409-2397504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2397959-2398154:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2398385-2398547:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2398636-2398737:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2398862-2399002:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2399563-2399712:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2400003-2400167:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2400669-2400917:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2401023-2401302:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2402271-2404417:1:exon

INHBC
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: INHBC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2412096..2414119
location: region:2412096-2414119:1
so has part: feature:2412096-2414119:1:exon
subclass of: SO_0000010

100542150
type: Gene
SIO_000068: ncbigene

position:2412096:1
position: 2412096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2414119:1
position: 2414119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2412096-2414119:1:exon

INHBC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: INHBC
product: inhibin subunit beta C
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_031554750.1
SIO_010081: INHBC
subclass of: SO_0000673
so part of: INHBC
location: join(2412096..2412404,2413187..2414119)
location: region:2412096-2414119:1
so has part: feature:2412096-2412404:1:exon
so has part: feature:2413187-2414119:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2412096-2412404:1:exon

position:2412404:1
position: 2412404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2413187-2414119:1:exon

position:2413187:1
position: 2413187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INHBC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: INHBC
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: inhibin beta C chain
translation: MAAVLTFLLLILLRMASSHGAARCPGALPPPAQRRALLAVAQHSILSRLHLSERPVAPRPPPRAALLSALRRVQPRLNRGVXPPRPPNAAEQNYEVLSFAEAGPSTPRSSRLLFRFSQELRGNSEVLQAQLHLFWASPGPGSSQPVSVRLLHGDAAPNGTALSEAMLEVRGEGWKALDVSDALRSVLSRGTERLTVELNTSRPPLPTYGDHHRPFVAVRARXRDPPSRRRRGIDCSGSTRTCCRKEFFVDFKEIGWEDWIIQPEGYHMNYCAGLCPPHVAAVPGVAASFHTAVLNLIKANNADAAADSCCVPTQRRPLSLLYYDRDSNIVKTDIPDMIVDACGCT
SIO_010081: INHBC
subclass of: SO_0000673
so part of: INHBC
location: join(2412099..2412404,2413187..2413916)
location: region:2412099-2413916:1
so has part: feature:2412099-2412404:1:exon
so has part: feature:2413187-2413916:1:exon

XP_031410610.1
type: Protein
SIO_000068: ncbiprotein

position:2412099:1
position: 2412099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2413916:1
position: 2413916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2412099-2412404:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2413187-2413916:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2420671..2420770
location: region:2420671-2420770:1
so has part: feature:2420671-2420770:1:region

position:2420671:1
position: 2420671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2420770:1
position: 2420770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2420671-2420770:1:region

SNRNP200
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SNRNP200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2420907..2439570
location: region:2420907-2439570:1
so has part: feature:2420907-2439570:1:exon
subclass of: SO_0000010

100541104
type: Gene
SIO_000068: ncbigene

position:2420907:1
position: 2420907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2439570:1
position: 2439570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2420907-2439570:1:exon

SNRNP200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SNRNP200
product: small nuclear ribonucleoprotein U5 subunit 200
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 219 samples with support for all annotated introns
transcript id: XM_010715558.3
SIO_010081: SNRNP200
subclass of: SO_0000673
so part of: SNRNP200
location: join(2420907..2421065,2422436..2422607,2422721..2422913,2423215..2423270,2423843..2423941,2424228..2424380,2424818..2424917,2425086..2425222,2426110..2426193,2426397..2426570,2427720..2427857,2428012..2428167,2428440..2428609,2428753..2428946,2429312..2429435,2429817..2429966,2430112..2430222,2430563..2430694,2431023..2431211,2431353..2431550,2431849..2432001,2432114..2432194,2432344..2432427,2432836..2432942,2433094..2433212,2433437..2433591,2433774..2433963,2434158..2434331,2434819..2434979,2435240..2435467,2435719..2435910,2435985..2436163,2436346..2436497,2436759..2436867,2436996..2437104,2437278..2437467,2437571..2437735,2437952..2438073,2438169..2438312,2438393..2438569,2438659..2438819,2438896..2438977,2439085..2439177,2439264..2439570)
location: region:2420907-2439570:1
so has part: feature:2420907-2421065:1:exon
so has part: feature:2422436-2422607:1:exon
so has part: feature:2422721-2422913:1:exon
so has part: feature:2423215-2423270:1:exon
so has part: feature:2423843-2423941:1:exon
so has part: feature:2424228-2424380:1:exon
so has part: feature:2424818-2424917:1:exon
so has part: feature:2425086-2425222:1:exon
so has part: feature:2426110-2426193:1:exon
so has part: feature:2426397-2426570:1:exon
so has part: feature:2427720-2427857:1:exon
so has part: feature:2428012-2428167:1:exon
so has part: feature:2428440-2428609:1:exon
so has part: feature:2428753-2428946:1:exon
so has part: feature:2429312-2429435:1:exon
so has part: feature:2429817-2429966:1:exon
so has part: feature:2430112-2430222:1:exon
so has part: feature:2430563-2430694:1:exon
so has part: feature:2431023-2431211:1:exon
so has part: feature:2431353-2431550:1:exon
so has part: feature:2431849-2432001:1:exon
so has part: feature:2432114-2432194:1:exon
so has part: feature:2432344-2432427:1:exon
so has part: feature:2432836-2432942:1:exon
so has part: feature:2433094-2433212:1:exon
so has part: feature:2433437-2433591:1:exon
so has part: feature:2433774-2433963:1:exon
so has part: feature:2434158-2434331:1:exon
so has part: feature:2434819-2434979:1:exon
so has part: feature:2435240-2435467:1:exon
so has part: feature:2435719-2435910:1:exon
so has part: feature:2435985-2436163:1:exon
so has part: feature:2436346-2436497:1:exon
so has part: feature:2436759-2436867:1:exon
so has part: feature:2436996-2437104:1:exon
so has part: feature:2437278-2437467:1:exon
so has part: feature:2437571-2437735:1:exon
so has part: feature:2437952-2438073:1:exon
so has part: feature:2438169-2438312:1:exon
so has part: feature:2438393-2438569:1:exon
so has part: feature:2438659-2438819:1:exon
so has part: feature:2438896-2438977:1:exon
so has part: feature:2439085-2439177:1:exon
so has part: feature:2439264-2439570:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2420907-2421065:1:exon

position:2421065:1
position: 2421065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2422436-2422607:1:exon

position:2422436:1
position: 2422436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2422607:1
position: 2422607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2422721-2422913:1:exon

position:2422721:1
position: 2422721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2422913:1
position: 2422913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2423215-2423270:1:exon

position:2423215:1
position: 2423215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2423270:1
position: 2423270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2423843-2423941:1:exon

position:2423843:1
position: 2423843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2423941:1
position: 2423941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2424228-2424380:1:exon

position:2424228:1
position: 2424228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2424380:1
position: 2424380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2424818-2424917:1:exon

position:2424818:1
position: 2424818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2424917:1
position: 2424917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2425086-2425222:1:exon

position:2425086:1
position: 2425086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425222:1
position: 2425222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2426110-2426193:1:exon

position:2426110:1
position: 2426110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2426193:1
position: 2426193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2426397-2426570:1:exon

position:2426397:1
position: 2426397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2426570:1
position: 2426570
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2427720-2427857:1:exon

position:2427720:1
position: 2427720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2427857:1
position: 2427857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2428012-2428167:1:exon

position:2428012:1
position: 2428012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2428167:1
position: 2428167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2428440-2428609:1:exon

position:2428440:1
position: 2428440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2428609:1
position: 2428609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2428753-2428946:1:exon

position:2428753:1
position: 2428753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2428946:1
position: 2428946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2429312-2429435:1:exon

position:2429312:1
position: 2429312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429435:1
position: 2429435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2429817-2429966:1:exon

position:2429817:1
position: 2429817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429966:1
position: 2429966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2430112-2430222:1:exon

position:2430112:1
position: 2430112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430222:1
position: 2430222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2430563-2430694:1:exon

position:2430563:1
position: 2430563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2430694:1
position: 2430694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2431023-2431211:1:exon

position:2431023:1
position: 2431023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2431211:1
position: 2431211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2431353-2431550:1:exon

position:2431353:1
position: 2431353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2431550:1
position: 2431550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2431849-2432001:1:exon

position:2431849:1
position: 2431849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432001:1
position: 2432001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2432114-2432194:1:exon

position:2432114:1
position: 2432114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432194:1
position: 2432194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2432344-2432427:1:exon

position:2432344:1
position: 2432344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432427:1
position: 2432427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2432836-2432942:1:exon

position:2432836:1
position: 2432836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432942:1
position: 2432942
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2433094-2433212:1:exon

position:2433094:1
position: 2433094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2433212:1
position: 2433212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2433437-2433591:1:exon

position:2433437:1
position: 2433437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2433591:1
position: 2433591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2433774-2433963:1:exon

position:2433774:1
position: 2433774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2433963:1
position: 2433963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2434158-2434331:1:exon

position:2434158:1
position: 2434158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2434331:1
position: 2434331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2434819-2434979:1:exon

position:2434819:1
position: 2434819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2434979:1
position: 2434979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2435240-2435467:1:exon

position:2435240:1
position: 2435240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2435467:1
position: 2435467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2435719-2435910:1:exon

position:2435719:1
position: 2435719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2435910:1
position: 2435910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2435985-2436163:1:exon

position:2435985:1
position: 2435985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2436163:1
position: 2436163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:2436346-2436497:1:exon

position:2436346:1
position: 2436346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2436497:1
position: 2436497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:2436759-2436867:1:exon

position:2436759:1
position: 2436759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2436867:1
position: 2436867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2436996-2437104:1:exon

position:2436996:1
position: 2436996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2437104:1
position: 2437104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:2437278-2437467:1:exon

position:2437278:1
position: 2437278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2437467:1
position: 2437467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:2437571-2437735:1:exon

position:2437571:1
position: 2437571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2437735:1
position: 2437735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:2437952-2438073:1:exon

position:2437952:1
position: 2437952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438073:1
position: 2438073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:2438169-2438312:1:exon

position:2438169:1
position: 2438169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438312:1
position: 2438312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2438393-2438569:1:exon

position:2438393:1
position: 2438393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438569:1
position: 2438569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2438659-2438819:1:exon

position:2438659:1
position: 2438659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438819:1
position: 2438819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2438896-2438977:1:exon

position:2438896:1
position: 2438896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2438977:1
position: 2438977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2439085-2439177:1:exon

position:2439085:1
position: 2439085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2439177:1
position: 2439177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2439264-2439570:1:exon

position:2439264:1
position: 2439264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNRNP200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SNRNP200
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein 200 kDa helicase
translation: MGDKAQRTKPQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFIQAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKITDYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDIYGEVRDEASDDDMEGDEAVVRCTLSANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFAQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLVSVEKLPKYAQAGFEGFKTLNRIQSKLYRAALESDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDEFKIIYIAPMRSLVQEMVGSFGKRLATYGINVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKXGERTYTQLVRLVILDEIHLLHDDRGPVLESLVARAIRNIEMTQEDVRLVGLSATLPNYEDVATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAETVLGNVQNAKDAVNWLGYTYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNETMQTYNQLLKPTLSEIELFRVFSLSSEFRNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFKKLPEEVVKKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKVELTIAPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLVTFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQNSEGRCVYITPMEALAEQVFMDWYEKFQERLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWKQRKNVQNVNLFIVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAIMKHSPKKPIIVFVPSRKQTRLTAINILTTCASDVQRHRFLHCAEKDLVPYLDKLNDNTLKETLVNGVGYLHEGLTAMERRVVEQLFSSGAVQVMVASRSLCWGMNIAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGVSHRHLSDHLSELVEQTLSDLEQSKCISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPIRHHEDNLLRQLAQKVPHKLTNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVESVFDIMEMEDEDRNALLQLSDAQIADVARFCNRYPNIELSYEVVEKESIRSGGPVVVLVQLEREEEVTGPV…
SIO_010081: SNRNP200
subclass of: SO_0000673
so part of: SNRNP200
location: join(2421010..2421065,2422436..2422607,2422721..2422913,2423215..2423270,2423843..2423941,2424228..2424380,2424818..2424917,2425086..2425222,2426110..2426193,2426397..2426570,2427720..2427857,2428012..2428167,2428440..2428609,2428753..2428946,2429312..2429435,2429817..2429966,2430112..2430222,2430563..2430694,2431023..2431211,2431353..2431550,2431849..2432001,2432114..2432194,2432344..2432427,2432836..2432942,2433094..2433212,2433437..2433591,2433774..2433963,2434158..2434331,2434819..2434979,2435240..2435467,2435719..2435910,2435985..2436163,2436346..2436497,2436759..2436867,2436996..2437104,2437278..2437467,2437571..2437735,2437952..2438073,2438169..2438312,2438393..2438569,2438659..2438819,2438896..2438977,2439085..2439177,2439264..2439407)
location: region:2421010-2439407:1
so has part: feature:2421010-2421065:1:exon
so has part: feature:2422436-2422607:1:exon
so has part: feature:2422721-2422913:1:exon
so has part: feature:2423215-2423270:1:exon
so has part: feature:2423843-2423941:1:exon
so has part: feature:2424228-2424380:1:exon
so has part: feature:2424818-2424917:1:exon
so has part: feature:2425086-2425222:1:exon
so has part: feature:2426110-2426193:1:exon
so has part: feature:2426397-2426570:1:exon
so has part: feature:2427720-2427857:1:exon
so has part: feature:2428012-2428167:1:exon
so has part: feature:2428440-2428609:1:exon
so has part: feature:2428753-2428946:1:exon
so has part: feature:2429312-2429435:1:exon
so has part: feature:2429817-2429966:1:exon
so has part: feature:2430112-2430222:1:exon
so has part: feature:2430563-2430694:1:exon
so has part: feature:2431023-2431211:1:exon
so has part: feature:2431353-2431550:1:exon
so has part: feature:2431849-2432001:1:exon
so has part: feature:2432114-2432194:1:exon
so has part: feature:2432344-2432427:1:exon
so has part: feature:2432836-2432942:1:exon
so has part: feature:2433094-2433212:1:exon
so has part: feature:2433437-2433591:1:exon
so has part: feature:2433774-2433963:1:exon
so has part: feature:2434158-2434331:1:exon
so has part: feature:2434819-2434979:1:exon
so has part: feature:2435240-2435467:1:exon
so has part: feature:2435719-2435910:1:exon
so has part: feature:2435985-2436163:1:exon
so has part: feature:2436346-2436497:1:exon
so has part: feature:2436759-2436867:1:exon
so has part: feature:2436996-2437104:1:exon
so has part: feature:2437278-2437467:1:exon
so has part: feature:2437571-2437735:1:exon
so has part: feature:2437952-2438073:1:exon
so has part: feature:2438169-2438312:1:exon
so has part: feature:2438393-2438569:1:exon
so has part: feature:2438659-2438819:1:exon
so has part: feature:2438896-2438977:1:exon
so has part: feature:2439085-2439177:1:exon
so has part: feature:2439264-2439407:1:exon

XP_010713860.2
type: Protein
SIO_000068: ncbiprotein

position:2421010:1
position: 2421010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2439407:1
position: 2439407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2421010-2421065:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2422436-2422607:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2422721-2422913:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2423215-2423270:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2423843-2423941:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2424228-2424380:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2424818-2424917:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2425086-2425222:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2426110-2426193:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2426397-2426570:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2427720-2427857:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2428012-2428167:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2428440-2428609:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2428753-2428946:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2429312-2429435:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2429817-2429966:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2430112-2430222:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2430563-2430694:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2431023-2431211:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2431353-2431550:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2431849-2432001:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2432114-2432194:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2432344-2432427:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2432836-2432942:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2433094-2433212:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2433437-2433591:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433774-2433963:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2434158-2434331:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2434819-2434979:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2435240-2435467:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2435719-2435910:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2435985-2436163:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2436346-2436497:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2436759-2436867:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2436996-2437104:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2437278-2437467:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2437571-2437735:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2437952-2438073:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2438169-2438312:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2438393-2438569:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2438659-2438819:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2438896-2438977:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2439085-2439177:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2439264-2439407:1:exon

CIAO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CIAO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2440022..>2442314)
location: region:2440022-2442314:-1
so has part: feature:2440022-2442314:-1:exon
subclass of: SO_0000010

100541255
type: Gene
SIO_000068: ncbigene

position:2440022:-1
position: 2440022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2442314:-1
position: 2442314
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2440022-2442314:-1:exon

CIAO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CIAO1
product: cytosolic iron-sulfur assembly component 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010715559.3
SIO_010081: CIAO1
subclass of: SO_0000673
so part of: CIAO1
location: complement(join(2440022..2440513,2440596..2440683,2440797..2440998,2441214..2441302,2441399..2441510,2441596..2441742,2442186..>2442314))
location: region:2440022-2442314:-1
so has part: feature:2442186-2442314:-1:exon
so has part: feature:2441596-2441742:-1:exon
so has part: feature:2441399-2441510:-1:exon
so has part: feature:2441214-2441302:-1:exon
so has part: feature:2440797-2440998:-1:exon
so has part: feature:2440596-2440683:-1:exon
so has part: feature:2440022-2440513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2442186-2442314:-1:exon

position:2442186:-1
position: 2442186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2441596-2441742:-1:exon

position:2441596:-1
position: 2441596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2441742:-1
position: 2441742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2441399-2441510:-1:exon

position:2441399:-1
position: 2441399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2441510:-1
position: 2441510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2441214-2441302:-1:exon

position:2441214:-1
position: 2441214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2441302:-1
position: 2441302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2440797-2440998:-1:exon

position:2440797:-1
position: 2440797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2440998:-1
position: 2440998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2440596-2440683:-1:exon

position:2440596:-1
position: 2440596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2440683:-1
position: 2440683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2440022-2440513:-1:exon

position:2440513:-1
position: 2440513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CIAO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CIAO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable cytosolic iron-sulfur protein assembly protein CIAO1
translation: SRVAAHPEARCWFLAWSPGGALLASCGGDRAVRIWGREGTAGLGLGSCGAVLADGQQRTVRRVAWSPCGSYLASASFDATTCIWKRCEDGFECVTTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYHEEEDDWVCCATLEGHESTVWSVAFDGSGERLASCSDDKTVRIWQCYKPGNEEGVACSGTDPTWKCVCNLSGYHSRTIYDVSWCRLTGALATACGDDAIRVFEESSSSSPQQQQPTFSLTAHVPRAHSQDVNCVAWNPKEPGLVASCSDDGEIAFWKYQQPEAC
SIO_010081: CIAO1
subclass of: SO_0000673
so part of: CIAO1
location: complement(join(2440267..2440513,2440596..2440683,2440797..2440998,2441214..2441302,2441399..2441510,2441596..2441742,2442186..>2442314))
location: region:2440267-2442314:-1
so has part: feature:2442186-2442314:-1:exon
so has part: feature:2441596-2441742:-1:exon
so has part: feature:2441399-2441510:-1:exon
so has part: feature:2441214-2441302:-1:exon
so has part: feature:2440797-2440998:-1:exon
so has part: feature:2440596-2440683:-1:exon
so has part: feature:2440267-2440513:-1:exon

XP_010713861.1
type: Protein
SIO_000068: ncbiprotein

position:2440267:-1
position: 2440267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2442186-2442314:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2441596-2441742:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2441399-2441510:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2441214-2441302:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2440797-2440998:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2440596-2440683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2440267-2440513:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9103
estimated length: unknown
gap type: between scaffolds
so part of: sequence
location: 2453317..2453416
location: region:2453317-2453416:1
so has part: feature:2453317-2453416:1:region

position:2453317:1
position: 2453317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2453416:1
position: 2453416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2453317-2453416:1:region

LOC100542724
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100542724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2694209..2695922
location: region:2694209-2695922:1
so has part: feature:2694209-2695922:1:exon
subclass of: SO_0000010

100542724
type: Gene
SIO_000068: ncbigene

position:2694209:1
position: 2694209
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2695922:1
position: 2695922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2694209-2695922:1:exon

LOC100542724
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100542724
product: barH-like 2 homeobox protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010715840.1
SIO_010081: LOC100542724
subclass of: SO_0000673
so part of: LOC100542724
location: join(<2694209..2694425,2695480..2695705,2695859..2695922)
location: region:2694209-2695922:1
so has part: feature:2694209-2694425:1:exon
so has part: feature:2695480-2695705:1:exon
so has part: feature:2695859-2695922:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2694209-2694425:1:exon

position:2694425:1
position: 2694425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2695480-2695705:1:exon

position:2695480:1
position: 2695480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2695705:1
position: 2695705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2695859-2695922:1:exon

position:2695859:1
position: 2695859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100542724
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100542724
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: barH-like 2 homeobox protein
translation: RTATSSFLIKDILGDGKPLAACAPYSTSVPSPHHTPKQEGSAAPESFRPKLEQEDKAKLDKREDAQGDIKCHGTKEEGDREISSSRDSPPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRLQVIRNGTDPSHPSDYLSEA
SIO_010081: LOC100542724
subclass of: SO_0000673
so part of: LOC100542724
location: join(<2694209..2694425,2695480..2695705,2695859..2695922)
location: region:2694209-2695922:1
so has part: feature:2694209-2694425:1:exon
so has part: feature:2695480-2695705:1:exon
so has part: feature:2695859-2695922:1:exon

XP_010714142.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2694209-2694425:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2695480-2695705:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2695859-2695922:1:exon

ZNF644
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ZNF644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2736261..2753902
location: region:2736261-2753902:1
so has part: feature:2736261-2753902:1:exon
subclass of: SO_0000010

100544141
type: Gene
SIO_000068: ncbigene

position:2736261:1
position: 2736261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2753902:1
position: 2753902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2736261-2753902:1:exon

ZNF644
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZNF644
product: zinc finger protein 644
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 199 samples with support for all annotated introns
transcript id: XM_019618435.2
SIO_010081: ZNF644
subclass of: SO_0000673
so part of: ZNF644
location: join(2736261..2736397,2737619..2739665,2740088..2740643,2751626..2751728,2752201..2753902)
location: region:2736261-2753902:1
so has part: feature:2736261-2736397:1:exon
so has part: feature:2737619-2739665:1:exon
so has part: feature:2740088-2740643:1:exon
so has part: feature:2751626-2751728:1:exon
so has part: feature:2752201-2753902:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2736261-2736397:1:exon

position:2736397:1
position: 2736397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2737619-2739665:1:exon

position:2737619:1
position: 2737619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2739665:1
position: 2739665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2740088-2740643:1:exon

position:2740088:1
position: 2740088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2740643:1
position: 2740643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2751626-2751728:1:exon

position:2751626:1
position: 2751626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2751728:1
position: 2751728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2752201-2753902:1:exon

position:2752201:1
position: 2752201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF644
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZNF644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 644
translation: MDDLEINTEVTGAKEEEEEILCDFVSEEEGGIPESQESDTLFQKNSTLTLPEELSRDRSEKALSGGQTSLFIHTGAPTVSSENFILSRGTAVNGPVSHSTSTKTSIMNKGSVSLTTGQPVGHHTDSCSTLTVVHDLQLPAKSTTENSNQHQVLFLLPDVAHAKNMTHSIKNLPTSASVGCDSQKSVGNSVDSTLVGQVEVCEDDKNLLVKDDCVDALTGISSGTGGFRSGCEPSWDPQKEFIQFLMTNEETIEKSPIHCKVGLEKKRKRKMDVSKITRYTEDCFGDTTYIPSKSKLLTVDFLEQNEELQIVEPQKYSLSKVKPESTDEELEAVDAIQQLIYSPTGSCAEDASPVHTSTFLSNTLKNKCEQNDSESPSTFSTDEPSFYPCTKCNVNFREKKHLHRHMMYHLDGNSHFRHLNVPRPYACRECGRTFRDRNSLLKHMIIHQERRQKLMEEIRELKELQDEGRSARLQCPQCVFGTNCPKTFVQHAKTHEKDKRYYCCEECNFMAVTENELECHRGIAHGAVVKCSVIGSDMSQRKSQKKASMKDPYLGSSKKSSTYMCKMCPFTTSARSILKKHMEYLHPASCIDPFGSHLRLEKRKSNIIEESLDFGSRTKQLIKQSSTFPKNSVLKQDVKRSFGSTSQSSNFGKLHKRPYRIQKARKSVSQSSRLNSAEKKDSYETEDESSWDNAELCDYTTRSVEDESYSDINQEHVSLFPIFKGKMEDHEAGDKSSLSYEQNDGFYFEYYEDAESSNFLHDLHDAQNLENVGSALPKHNSVFHWTDLSLEKKSCPYCPATFETGVGLSNHVRGHLHRAGLSYEARHVVSPEQIATSDKMQHFKRTGTGTPVKRVRKALDCKQKKSRSRSGSKKKMLPLPHSADEVYILRCRFCGLVFRGPLSVQEDWIKHLQRHIVNANLPRTGAGMVEVTSLLKKPASITETSFSLLMAEAAS
SIO_010081: ZNF644
subclass of: SO_0000673
so part of: ZNF644
location: join(2737650..2739665,2740088..2740643,2751626..2751728,2752201..2752393)
location: region:2737650-2752393:1
so has part: feature:2737650-2739665:1:exon
so has part: feature:2740088-2740643:1:exon
so has part: feature:2751626-2751728:1:exon
so has part: feature:2752201-2752393:1:exon

XP_019473980.1
type: Protein
SIO_000068: ncbiprotein

position:2737650:1
position: 2737650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2752393:1
position: 2752393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2737650-2739665:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2740088-2740643:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2751626-2751728:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2752201-2752393:1:exon

LOC109369189
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369189
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2747349..2750794)
location: region:2747349-2750794:-1
so has part: feature:2747349-2750794:-1:exon
subclass of: SO_0000011

109369189
type: Gene
SIO_000068: ncbigene

position:2747349:-1
position: 2747349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2750794:-1
position: 2750794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2747349-2750794:-1:exon

LOC109369189
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369189
product: uncharacterized LOC109369189
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004160713.1
SIO_010081: LOC109369189
subclass of: SO_0000673
so part of: LOC109369189
location: complement(join(2747349..2747455,2750033..2750106,2750709..2750794))
location: region:2747349-2750794:-1
so has part: feature:2750709-2750794:-1:exon
so has part: feature:2750033-2750106:-1:exon
so has part: feature:2747349-2747455:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2750709-2750794:-1:exon

position:2750709:-1
position: 2750709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2750033-2750106:-1:exon

position:2750033:-1
position: 2750033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2750106:-1
position: 2750106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2747349-2747455:-1:exon

position:2747455:-1
position: 2747455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109369190
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369190
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2768702..2788087
location: region:2768702-2788087:1
so has part: feature:2768702-2788087:1:exon
subclass of: SO_0000011

109369190
type: Gene
SIO_000068: ncbigene

position:2768702:1
position: 2768702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2788087:1
position: 2788087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2768702-2788087:1:exon

LOC109369190
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369190
product: uncharacterized LOC109369190
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004160714.1
SIO_010081: LOC109369190
subclass of: SO_0000673
so part of: LOC109369190
location: join(2768702..2769429,2783926..2783981,2787912..2788087)
location: region:2768702-2788087:1
so has part: feature:2768702-2769429:1:exon
so has part: feature:2783926-2783981:1:exon
so has part: feature:2787912-2788087:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2768702-2769429:1:exon

position:2769429:1
position: 2769429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2783926-2783981:1:exon

position:2783926:1
position: 2783926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2783981:1
position: 2783981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2787912-2788087:1:exon

position:2787912:1
position: 2787912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100543214
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100543214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2816215..2837429
location: region:2816215-2837429:1
so has part: feature:2816215-2837429:1:exon
subclass of: SO_0000010

100543214
type: Gene
SIO_000068: ncbigene

position:2816215:1
position: 2816215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2837429:1
position: 2837429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2816215-2837429:1:exon

LOC100543214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543214
product: probable ATP-dependent DNA helicase HFM1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_019618439.2
SIO_010081: LOC100543214
subclass of: SO_0000673
so part of: LOC100543214
location: join(2816215..2816660,2817710..2817790,2818374..2818465,2819149..2819255,2819347..2819394,2819593..2819690,2819779..2819910,2822025..2822110,2823069..2823152,2825067..2825224,2825888..2825991,2827486..2827638,2828543..2828661,2829544..2829626,2829782..2829891,2831698..2831796,2832558..2832618,2832898..2833003,2833248..2833405,2833631..2837429)
location: region:2816215-2837429:1
so has part: feature:2816215-2816660:1:exon
so has part: feature:2817710-2817790:1:exon
so has part: feature:2818374-2818465:1:exon
so has part: feature:2819149-2819255:1:exon
so has part: feature:2819347-2819394:1:exon
so has part: feature:2819593-2819690:1:exon
so has part: feature:2819779-2819910:1:exon
so has part: feature:2822025-2822110:1:exon
so has part: feature:2823069-2823152:1:exon
so has part: feature:2825067-2825224:1:exon
so has part: feature:2825888-2825991:1:exon
so has part: feature:2827486-2827638:1:exon
so has part: feature:2828543-2828661:1:exon
so has part: feature:2829544-2829626:1:exon
so has part: feature:2829782-2829891:1:exon
so has part: feature:2831698-2831796:1:exon
so has part: feature:2832558-2832618:1:exon
so has part: feature:2832898-2833003:1:exon
so has part: feature:2833248-2833405:1:exon
so has part: feature:2833631-2837429:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2816215-2816660:1:exon

position:2816660:1
position: 2816660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2817710-2817790:1:exon

position:2817710:1
position: 2817710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2817790:1
position: 2817790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2818374-2818465:1:exon

position:2818374:1
position: 2818374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2818465:1
position: 2818465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2819149-2819255:1:exon

position:2819149:1
position: 2819149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2819255:1
position: 2819255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2819347-2819394:1:exon

position:2819347:1
position: 2819347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2819394:1
position: 2819394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2819593-2819690:1:exon

position:2819593:1
position: 2819593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2819690:1
position: 2819690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2819779-2819910:1:exon

position:2819779:1
position: 2819779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2819910:1
position: 2819910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2822025-2822110:1:exon

position:2822025:1
position: 2822025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2822110:1
position: 2822110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2823069-2823152:1:exon

position:2823069:1
position: 2823069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2823152:1
position: 2823152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2825067-2825224:1:exon

position:2825067:1
position: 2825067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2825224:1
position: 2825224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2825888-2825991:1:exon

position:2825888:1
position: 2825888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2825991:1
position: 2825991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2827486-2827638:1:exon

position:2827486:1
position: 2827486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2827638:1
position: 2827638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2828543-2828661:1:exon

position:2828543:1
position: 2828543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2828661:1
position: 2828661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2829544-2829626:1:exon

position:2829544:1
position: 2829544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829626:1
position: 2829626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2829782-2829891:1:exon

position:2829782:1
position: 2829782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829891:1
position: 2829891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2831698-2831796:1:exon

position:2831698:1
position: 2831698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2831796:1
position: 2831796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2832558-2832618:1:exon

position:2832558:1
position: 2832558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2832618:1
position: 2832618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2832898-2833003:1:exon

position:2832898:1
position: 2832898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2833003:1
position: 2833003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2833248-2833405:1:exon

position:2833248:1
position: 2833248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2833405:1
position: 2833405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2833631-2837429:1:exon

position:2833631:1
position: 2833631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100543214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543214
product: probable ATP-dependent DNA helicase HFM1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010715842.3
SIO_010081: LOC100543214
subclass of: SO_0000673
so part of: LOC100543214
location: join(2816215..2816660,2817710..2817790,2818374..2818465,2819149..2819255,2819347..2819394,2819593..2819690,2819779..2819910,2822025..2822110,2823069..2823152,2825067..2825224,2825888..2825991,2827486..2827638,2828060..2828155,2828543..2828661,2829544..2829626,2829782..2829891,2831698..2831796,2832558..2832618,2832898..2833003,2833248..2833405,2833631..2837427)
location: region:2816215-2837427:1
so has part: feature:2816215-2816660:1:exon
so has part: feature:2817710-2817790:1:exon
so has part: feature:2818374-2818465:1:exon
so has part: feature:2819149-2819255:1:exon
so has part: feature:2819347-2819394:1:exon
so has part: feature:2819593-2819690:1:exon
so has part: feature:2819779-2819910:1:exon
so has part: feature:2822025-2822110:1:exon
so has part: feature:2823069-2823152:1:exon
so has part: feature:2825067-2825224:1:exon
so has part: feature:2825888-2825991:1:exon
so has part: feature:2827486-2827638:1:exon
so has part: feature:2828060-2828155:1:exon
so has part: feature:2828543-2828661:1:exon
so has part: feature:2829544-2829626:1:exon
so has part: feature:2829782-2829891:1:exon
so has part: feature:2831698-2831796:1:exon
so has part: feature:2832558-2832618:1:exon
so has part: feature:2832898-2833003:1:exon
so has part: feature:2833248-2833405:1:exon
so has part: feature:2833631-2837427:1:exon

position:2837427:1
position: 2837427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2816215-2816660:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2817710-2817790:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2818374-2818465:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2819149-2819255:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2819347-2819394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2819593-2819690:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2819779-2819910:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2822025-2822110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2823069-2823152:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2825067-2825224:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2825888-2825991:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2827486-2827638:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2828060-2828155:1:exon

position:2828060:1
position: 2828060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2828155:1
position: 2828155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2828543-2828661:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2829544-2829626:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2829782-2829891:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2831698-2831796:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2832558-2832618:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2832898-2833003:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2833248-2833405:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2833631-2837427:1:exon

LOC100543214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent DNA helicase HFM1 isoform X1
translation: MDKENNFKPTETGRLMAWYYIAFDTVKQFFRIKGTETLKELVTMISNCAEFLDVKLRTNEKKILNALNKDKDKITIRFPMEGRIKTREMKVNCLIQAHLGCIPVQDFTLTQDIGKIFRNGIRVTRWLSDFLASSKDNFSALLNSLILAKCFRCRLWENSLHVSKQLEKIGVSLSNAMVNAGLTSFKKIQDTNARELELILNRHPPFGNQIKESVLHLPKYELNIEQLPKYSDTMAEILVTVVLTNFEQLQTRRTASDFHYVTLVVGDADNQVIFIQKIMDSVLLKTGNWMKKIEVKRALKSDDISINLISSDYVGLDIQQTYTAFYLTPRTVGSKTVINKLKAESSVDTSCGTAQSLPAAKVDAGSRSKEENTLKKYSNRECNHRCKNKDVCGHDCCKTGVFPKSEMSGDSKFSLYLADLRSRNSTSSVPPVKRLKMQMLNQAQNVDLKQFSFAPKSLMPASSRSGNKESFSSHSVDQVDSFNNLGRSQKQFESWDYRKSDALDVNAELKDDVWDDLDDEVLVVASNLFSRELDEHETLHKYSTSEAISDISEDSCLLQSDTSIQNSILSVFNGSSKVELSVQSGHVNTFPSQENKHSNLSQELEKIQCSSISNIIPDSSKFTRKENFFIFMKKQKEEMEPGYLPDDETSDVKPLLGLLDDIF
SIO_010081: LOC100543214
subclass of: SO_0000673
so part of: LOC100543214
location: join(2817760..2817790,2818374..2818465,2819149..2819255,2819347..2819394,2819593..2819690,2819779..2819910,2822025..2822110,2823069..2823152,2825067..2825224,2825888..2825991,2827486..2827638,2828060..2828155,2828543..2828661,2829544..2829626,2829782..2829891,2831698..2831796,2832558..2832618,2832898..2833003,2833248..2833405,2833631..2833697)
location: region:2817760-2833697:1
so has part: feature:2817760-2817790:1:exon
so has part: feature:2818374-2818465:1:exon
so has part: feature:2819149-2819255:1:exon
so has part: feature:2819347-2819394:1:exon
so has part: feature:2819593-2819690:1:exon
so has part: feature:2819779-2819910:1:exon
so has part: feature:2822025-2822110:1:exon
so has part: feature:2823069-2823152:1:exon
so has part: feature:2825067-2825224:1:exon
so has part: feature:2825888-2825991:1:exon
so has part: feature:2827486-2827638:1:exon
so has part: feature:2828060-2828155:1:exon
so has part: feature:2828543-2828661:1:exon
so has part: feature:2829544-2829626:1:exon
so has part: feature:2829782-2829891:1:exon
so has part: feature:2831698-2831796:1:exon
so has part: feature:2832558-2832618:1:exon
so has part: feature:2832898-2833003:1:exon
so has part: feature:2833248-2833405:1:exon
so has part: feature:2833631-2833697:1:exon

XP_010714144.2
type: Protein
SIO_000068: ncbiprotein

position:2817760:1
position: 2817760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2833697:1
position: 2833697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2817760-2817790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2818374-2818465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2819149-2819255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2819347-2819394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2819593-2819690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2819779-2819910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2822025-2822110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2823069-2823152:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2825067-2825224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2825888-2825991:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2827486-2827638:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2828060-2828155:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2828543-2828661:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2829544-2829626:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2829782-2829891:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2831698-2831796:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2832558-2832618:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2832898-2833003:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2833248-2833405:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2833631-2833697:1:exon

LOC100543214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent DNA helicase HFM1 isoform X2
translation: MDKENNFKPTETGRLMAWYYIAFDTVKQFFRIKGTETLKELVTMISNCAEFLDVKLRTNEKKILNALNKDKDKITIRFPMEGRIKTREMKVNCLIQAHLGCIPVQDFTLTQDIGKIFRNGIRVTRWLSDFLASSKDNFSALLNSLILAKCFRCRLWENSLHVSKQLEKIGVSLSNAMVNAGLTSFKKIQDTNARELELILNRHPPFGNQIKESVLHLPKYELNIEQLPKYSDTMAEILVTVVLTNFEQLQTRRTASDFHYVTLVVGDADNQVIFIQKIMDSVLLKTGNWMKKIEVKRALKSDDISINLISSDYVGLDIQQTYTAFYLTPRTVGSKTVINKLKAESSVDTSCGTAQSLPAAKVDAGKTGVFPKSEMSGDSKFSLYLADLRSRNSTSSVPPVKRLKMQMLNQAQNVDLKQFSFAPKSLMPASSRSGNKESFSSHSVDQVDSFNNLGRSQKQFESWDYRKSDALDVNAELKDDVWDDLDDEVLVVASNLFSRELDEHETLHKYSTSEAISDISEDSCLLQSDTSIQNSILSVFNGSSKVELSVQSGHVNTFPSQENKHSNLSQELEKIQCSSISNIIPDSSKFTRKENFFIFMKKQKEEMEPGYLPDDETSDVKPLLGLLDDIF
SIO_010081: LOC100543214
subclass of: SO_0000673
so part of: LOC100543214
location: join(2817760..2817790,2818374..2818465,2819149..2819255,2819347..2819394,2819593..2819690,2819779..2819910,2822025..2822110,2823069..2823152,2825067..2825224,2825888..2825991,2827486..2827638,2828543..2828661,2829544..2829626,2829782..2829891,2831698..2831796,2832558..2832618,2832898..2833003,2833248..2833405,2833631..2833697)
location: region:2817760-2833697:1
so has part: feature:2817760-2817790:1:exon
so has part: feature:2818374-2818465:1:exon
so has part: feature:2819149-2819255:1:exon
so has part: feature:2819347-2819394:1:exon
so has part: feature:2819593-2819690:1:exon
so has part: feature:2819779-2819910:1:exon
so has part: feature:2822025-2822110:1:exon
so has part: feature:2823069-2823152:1:exon
so has part: feature:2825067-2825224:1:exon
so has part: feature:2825888-2825991:1:exon
so has part: feature:2827486-2827638:1:exon
so has part: feature:2828543-2828661:1:exon
so has part: feature:2829544-2829626:1:exon
so has part: feature:2829782-2829891:1:exon
so has part: feature:2831698-2831796:1:exon
so has part: feature:2832558-2832618:1:exon
so has part: feature:2832898-2833003:1:exon
so has part: feature:2833248-2833405:1:exon
so has part: feature:2833631-2833697:1:exon

XP_019473984.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2817760-2817790:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2818374-2818465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2819149-2819255:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2819347-2819394:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2819593-2819690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2819779-2819910:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2822025-2822110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2823069-2823152:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2825067-2825224:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2825888-2825991:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2827486-2827638:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2828543-2828661:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2829544-2829626:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2829782-2829891:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2831698-2831796:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2832558-2832618:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2832898-2833003:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2833248-2833405:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2833631-2833697:1:exon

LOC104912245
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2847504..2863070
location: region:2847504-2863070:1
so has part: feature:2847504-2863070:1:exon
subclass of: SO_0000010

104912245
type: Gene
SIO_000068: ncbigene

position:2847504:1
position: 2847504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2863070:1
position: 2863070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2847504-2863070:1:exon

LOC104912245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912245
product: probable ATP-dependent DNA helicase HFM1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031554754.1
SIO_010081: LOC104912245
subclass of: SO_0000673
so part of: LOC104912245
location: join(2847504..2848508,2849649..2849961,2850667..2850929,2851903..2851950,2854174..2854244,2854849..2854981,2856536..2856687,2857051..2857128,2857267..2857425,2857842..2858042,2858127..2858215,2859070..2859113,2859195..2859296,2860946..2861080)
location: region:2847504-2861080:1
so has part: feature:2847504-2848508:1:exon
so has part: feature:2849649-2849961:1:exon
so has part: feature:2850667-2850929:1:exon
so has part: feature:2851903-2851950:1:exon
so has part: feature:2854174-2854244:1:exon
so has part: feature:2854849-2854981:1:exon
so has part: feature:2856536-2856687:1:exon
so has part: feature:2857051-2857128:1:exon
so has part: feature:2857267-2857425:1:exon
so has part: feature:2857842-2858042:1:exon
so has part: feature:2858127-2858215:1:exon
so has part: feature:2859070-2859113:1:exon
so has part: feature:2859195-2859296:1:exon
so has part: feature:2860946-2861080:1:exon

position:2861080:1
position: 2861080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2847504-2848508:1:exon

position:2848508:1
position: 2848508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2849649-2849961:1:exon

position:2849649:1
position: 2849649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2849961:1
position: 2849961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2850667-2850929:1:exon

position:2850667:1
position: 2850667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2850929:1
position: 2850929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2851903-2851950:1:exon

position:2851903:1
position: 2851903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2851950:1
position: 2851950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2854174-2854244:1:exon

position:2854174:1
position: 2854174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854244:1
position: 2854244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2854849-2854981:1:exon

position:2854849:1
position: 2854849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2854981:1
position: 2854981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2856536-2856687:1:exon

position:2856536:1
position: 2856536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2856687:1
position: 2856687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2857051-2857128:1:exon

position:2857051:1
position: 2857051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2857128:1
position: 2857128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2857267-2857425:1:exon

position:2857267:1
position: 2857267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2857425:1
position: 2857425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2857842-2858042:1:exon

position:2857842:1
position: 2857842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2858042:1
position: 2858042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2858127-2858215:1:exon

position:2858127:1
position: 2858127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2858215:1
position: 2858215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2859070-2859113:1:exon

position:2859070:1
position: 2859070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859113:1
position: 2859113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2859195-2859296:1:exon

position:2859195:1
position: 2859195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2859296:1
position: 2859296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2860946-2861080:1:exon

position:2860946:1
position: 2860946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912245
product: probable ATP-dependent DNA helicase HFM1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031554755.1
SIO_010081: LOC104912245
subclass of: SO_0000673
so part of: LOC104912245
location: join(2847504..2848508,2849649..2849961,2850667..2850929,2851903..2851950,2854174..2854244,2854849..2854981,2856536..2856687,2857051..2857128,2857267..2857425,2857842..2858042,2858127..2858215,2859070..2859113,2860946..2861080)
location: region:2847504-2861080:1
so has part: feature:2847504-2848508:1:exon
so has part: feature:2849649-2849961:1:exon
so has part: feature:2850667-2850929:1:exon
so has part: feature:2851903-2851950:1:exon
so has part: feature:2854174-2854244:1:exon
so has part: feature:2854849-2854981:1:exon
so has part: feature:2856536-2856687:1:exon
so has part: feature:2857051-2857128:1:exon
so has part: feature:2857267-2857425:1:exon
so has part: feature:2857842-2858042:1:exon
so has part: feature:2858127-2858215:1:exon
so has part: feature:2859070-2859113:1:exon
so has part: feature:2860946-2861080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2847504-2848508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849649-2849961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2850667-2850929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2851903-2851950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2854174-2854244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2854849-2854981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2856536-2856687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2857051-2857128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2857267-2857425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2857842-2858042:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2858127-2858215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2859070-2859113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2860946-2861080:1:exon

LOC104912245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912245
product: probable ATP-dependent DNA helicase HFM1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031554751.1
SIO_010081: LOC104912245
subclass of: SO_0000673
so part of: LOC104912245
location: join(2847515..2848508,2849649..2849961,2850667..2850929,2851903..2851950,2854174..2854244,2854849..2854981,2856536..2856687,2857051..2857128,2857267..2857425,2857842..2858042,2858127..2858215,2859070..2859113,2859195..2859296,2860987..2861132,2861620..2861714,2862458..2863070)
location: region:2847515-2863070:1
so has part: feature:2847515-2848508:1:exon
so has part: feature:2849649-2849961:1:exon
so has part: feature:2850667-2850929:1:exon
so has part: feature:2851903-2851950:1:exon
so has part: feature:2854174-2854244:1:exon
so has part: feature:2854849-2854981:1:exon
so has part: feature:2856536-2856687:1:exon
so has part: feature:2857051-2857128:1:exon
so has part: feature:2857267-2857425:1:exon
so has part: feature:2857842-2858042:1:exon
so has part: feature:2858127-2858215:1:exon
so has part: feature:2859070-2859113:1:exon
so has part: feature:2859195-2859296:1:exon
so has part: feature:2860987-2861132:1:exon
so has part: feature:2861620-2861714:1:exon
so has part: feature:2862458-2863070:1:exon

position:2847515:1
position: 2847515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2847515-2848508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849649-2849961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2850667-2850929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2851903-2851950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2854174-2854244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2854849-2854981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2856536-2856687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2857051-2857128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2857267-2857425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2857842-2858042:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2858127-2858215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2859070-2859113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2859195-2859296:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2860987-2861132:1:exon

position:2860987:1
position: 2860987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2861132:1
position: 2861132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2861620-2861714:1:exon

position:2861620:1
position: 2861620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2861714:1
position: 2861714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2862458-2863070:1:exon

position:2862458:1
position: 2862458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912245
product: probable ATP-dependent DNA helicase HFM1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031554752.1
SIO_010081: LOC104912245
subclass of: SO_0000673
so part of: LOC104912245
location: join(2847515..2848508,2849649..2849961,2850667..2850929,2851903..2851950,2854174..2854244,2854849..2854981,2856536..2856687,2857051..2857128,2857267..2857425,2857842..2858042,2858127..2858215,2859070..2859113,2860987..2861132,2861620..2861714,2862458..2863070)
location: region:2847515-2863070:1
so has part: feature:2847515-2848508:1:exon
so has part: feature:2849649-2849961:1:exon
so has part: feature:2850667-2850929:1:exon
so has part: feature:2851903-2851950:1:exon
so has part: feature:2854174-2854244:1:exon
so has part: feature:2854849-2854981:1:exon
so has part: feature:2856536-2856687:1:exon
so has part: feature:2857051-2857128:1:exon
so has part: feature:2857267-2857425:1:exon
so has part: feature:2857842-2858042:1:exon
so has part: feature:2858127-2858215:1:exon
so has part: feature:2859070-2859113:1:exon
so has part: feature:2860987-2861132:1:exon
so has part: feature:2861620-2861714:1:exon
so has part: feature:2862458-2863070:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2847515-2848508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849649-2849961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2850667-2850929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2851903-2851950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2854174-2854244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2854849-2854981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2856536-2856687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2857051-2857128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2857267-2857425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2857842-2858042:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2858127-2858215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2859070-2859113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2860987-2861132:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2861620-2861714:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2862458-2863070:1:exon

LOC104912245
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912245
product: probable ATP-dependent DNA helicase HFM1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031554753.1
SIO_010081: LOC104912245
subclass of: SO_0000673
so part of: LOC104912245
location: join(2847516..2848508,2849649..2849961,2850847..2850929,2851903..2851950,2854174..2854244,2854849..2854981,2856536..2856687,2857051..2857128,2857267..2857425,2857842..2858042,2858127..2858215,2859070..2859113,2859195..2859296,2860987..2861132,2861620..2861714,2862458..2863070)
location: region:2847516-2863070:1
so has part: feature:2847516-2848508:1:exon
so has part: feature:2849649-2849961:1:exon
so has part: feature:2850847-2850929:1:exon
so has part: feature:2851903-2851950:1:exon
so has part: feature:2854174-2854244:1:exon
so has part: feature:2854849-2854981:1:exon
so has part: feature:2856536-2856687:1:exon
so has part: feature:2857051-2857128:1:exon
so has part: feature:2857267-2857425:1:exon
so has part: feature:2857842-2858042:1:exon
so has part: feature:2858127-2858215:1:exon
so has part: feature:2859070-2859113:1:exon
so has part: feature:2859195-2859296:1:exon
so has part: feature:2860987-2861132:1:exon
so has part: feature:2861620-2861714:1:exon
so has part: feature:2862458-2863070:1:exon

position:2847516:1
position: 2847516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2847516-2848508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849649-2849961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2850847-2850929:1:exon

position:2850847:1
position: 2850847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2851903-2851950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2854174-2854244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2854849-2854981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2856536-2856687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2857051-2857128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2857267-2857425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2857842-2858042:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2858127-2858215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2859070-2859113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2859195-2859296:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2860987-2861132:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2861620-2861714:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2862458-2863070:1:exon

LOC104912245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent DNA helicase HFM1 isoform X1
translation: MLFPCIFYDRDLENNKSNIWWIAPAPAIDEIPPAEELQRELEKNAASSCMGGIKHQKFIQQCKSITEEVNNKSPVPTCFGTASEKEVLQLCVGGRTKKHGSLKMASMFLSPDQAKYKIGTEIFQQPDSNFSKTKILINFPENGDDESVHSTFRKSLFKMPDCMYKNTEFKERSTDMKEFNTHFNTSENMTEVKKNAWREDHQPPVTTDSGFILHRVNDGDMASKIGIKIKSLSSASKILDMTGTTGRNLEILRAVTEIPTQFRCIFKEFPYFNYAQSKALDDLLYTDRNFVICAPTGSGKTVMFELAITRLLMEVPMPWLNIKVVYMAPIKALCSQRFDDWKEKFGPIGLSCKELTGDTVVDDLFEIHHAHIIITTPEKWDSMTRRWKDNSIVQLVRLFLIDEVHVIKDESRGATLEVVVSRMKTVQSSLWRLSENHHVPPLRFVAVSATIPNAEDIAEWLSDGKIPAVCQKVDEDQRPVKLRKIVLGFPCSDSQTEFKFDLTLNYKIASVIQAYSDQKPVLVFCATRKGVQQAASVLSKDAKFLLNVEQKQRLQKSANSLKDSKLRDLLMYGVAYHHAGMELSDRKIIEGVFTAGDLPVLFTTSTLAMGVNLPAHLVIIKSTMHYVGGMFEEYSETDILQMIGRAGRPQFDTMATAVIMTRLSTREKYIQMLNGADIIESSLHKHLVEHLNAEIALRTVTDVTVALEWIRSTFLYIRALKNPTHYGLFACSCSKF
SIO_010081: LOC104912245
subclass of: SO_0000673
so part of: LOC104912245
location: join(2848358..2848508,2849649..2849961,2850667..2850929,2851903..2851950,2854174..2854244,2854849..2854981,2856536..2856687,2857051..2857128,2857267..2857425,2857842..2858042,2858127..2858215,2859070..2859113,2859195..2859296,2860987..2861132,2861620..2861714,2862458..2862623)
location: region:2848358-2862623:1
so has part: feature:2848358-2848508:1:exon
so has part: feature:2849649-2849961:1:exon
so has part: feature:2850667-2850929:1:exon
so has part: feature:2851903-2851950:1:exon
so has part: feature:2854174-2854244:1:exon
so has part: feature:2854849-2854981:1:exon
so has part: feature:2856536-2856687:1:exon
so has part: feature:2857051-2857128:1:exon
so has part: feature:2857267-2857425:1:exon
so has part: feature:2857842-2858042:1:exon
so has part: feature:2858127-2858215:1:exon
so has part: feature:2859070-2859113:1:exon
so has part: feature:2859195-2859296:1:exon
so has part: feature:2860987-2861132:1:exon
so has part: feature:2861620-2861714:1:exon
so has part: feature:2862458-2862623:1:exon

XP_031410611.1
type: Protein
SIO_000068: ncbiprotein

position:2848358:1
position: 2848358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2862623:1
position: 2862623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2848358-2848508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849649-2849961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2850667-2850929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2851903-2851950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2854174-2854244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2854849-2854981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2856536-2856687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2857051-2857128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2857267-2857425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2857842-2858042:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2858127-2858215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2859070-2859113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2859195-2859296:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2860987-2861132:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2861620-2861714:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2862458-2862623:1:exon

LOC104912245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent DNA helicase HFM1 isoform X2
translation: MLFPCIFYDRDLENNKSNIWWIAPAPAIDEIPPAEELQRELEKNAASSCMGGIKHQKFIQQCKSITEEVNNKSPVPTCFGTASEKEVLQLCVGGRTKKHGSLKMASMFLSPDQAKYKIGTEIFQQPDSNFSKTKILINFPENGDDESVHSTFRKSLFKMPDCMYKNTEFKERSTDMKEFNTHFNTSENMTEVKKNAWREDHQPPVTTDSGFILHRVNDGDMASKIGIKIKSLSSASKILDMTGTTGRNLEILRAVTEIPTQFRCIFKEFPYFNYAQSKALDDLLYTDRNFVICAPTGSGKTVMFELAITRLLMEVPMPWLNIKVVYMAPIKALCSQRFDDWKEKFGPIGLSCKELTGDTVVDDLFEIHHAHIIITTPEKWDSMTRRWKDNSIVQLVRLFLIDEVHVIKDESRGATLEVVVSRMKTVQSSLWRLSENHHVPPLRFVAVSATIPNAEDIAEWLSDGKIPAVCQKVDEDQRPVKLRKIVLGFPCSDSQTEFKFDLTLNYKIASVIQAYSDQKPVLVFCATRKGVQQAASVLSKDAKFLLNVEQKQRLQKSANSLKDSKLRVTTSTLAMGVNLPAHLVIIKSTMHYVGGMFEEYSETDILQMIGRAGRPQFDTMATAVIMTRLSTREKYIQMLNGADIIESSLHKHLVEHLNAEIALRTVTDVTVALEWIRSTFLYIRALKNPTHYGLFACSCSKF
SIO_010081: LOC104912245
subclass of: SO_0000673
so part of: LOC104912245
location: join(2848358..2848508,2849649..2849961,2850667..2850929,2851903..2851950,2854174..2854244,2854849..2854981,2856536..2856687,2857051..2857128,2857267..2857425,2857842..2858042,2858127..2858215,2859070..2859113,2860987..2861132,2861620..2861714,2862458..2862623)
location: region:2848358-2862623:1
so has part: feature:2848358-2848508:1:exon
so has part: feature:2849649-2849961:1:exon
so has part: feature:2850667-2850929:1:exon
so has part: feature:2851903-2851950:1:exon
so has part: feature:2854174-2854244:1:exon
so has part: feature:2854849-2854981:1:exon
so has part: feature:2856536-2856687:1:exon
so has part: feature:2857051-2857128:1:exon
so has part: feature:2857267-2857425:1:exon
so has part: feature:2857842-2858042:1:exon
so has part: feature:2858127-2858215:1:exon
so has part: feature:2859070-2859113:1:exon
so has part: feature:2860987-2861132:1:exon
so has part: feature:2861620-2861714:1:exon
so has part: feature:2862458-2862623:1:exon

XP_031410612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2848358-2848508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849649-2849961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2850667-2850929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2851903-2851950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2854174-2854244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2854849-2854981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2856536-2856687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2857051-2857128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2857267-2857425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2857842-2858042:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2858127-2858215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2859070-2859113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2860987-2861132:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2861620-2861714:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2862458-2862623:1:exon

LOC104912245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent DNA helicase HFM1 isoform X3
translation: MLFPCIFYDRDLENNKSNIWWIAPAPAIDEIPPAEELQRELEKNAASSCMGGIKHQKFIQQCKSITEEVNNKSPVPTCFGTASEKEVLQLCVGGRTKKHGSLKMASMFLSPDQAKYKIGTEIFQQPDSNFSKTKILINFPENGDDESVHSTFRKRVNDGDMASKIGIKIKSLSSASKILDMTGTTGRNLEILRAVTEIPTQFRCIFKEFPYFNYAQSKALDDLLYTDRNFVICAPTGSGKTVMFELAITRLLMEVPMPWLNIKVVYMAPIKALCSQRFDDWKEKFGPIGLSCKELTGDTVVDDLFEIHHAHIIITTPEKWDSMTRRWKDNSIVQLVRLFLIDEVHVIKDESRGATLEVVVSRMKTVQSSLWRLSENHHVPPLRFVAVSATIPNAEDIAEWLSDGKIPAVCQKVDEDQRPVKLRKIVLGFPCSDSQTEFKFDLTLNYKIASVIQAYSDQKPVLVFCATRKGVQQAASVLSKDAKFLLNVEQKQRLQKSANSLKDSKLRDLLMYGVAYHHAGMELSDRKIIEGVFTAGDLPVLFTTSTLAMGVNLPAHLVIIKSTMHYVGGMFEEYSETDILQMIGRAGRPQFDTMATAVIMTRLSTREKYIQMLNGADIIESSLHKHLVEHLNAEIALRTVTDVTVALEWIRSTFLYIRALKNPTHYGLFACSCSKF
SIO_010081: LOC104912245
subclass of: SO_0000673
so part of: LOC104912245
location: join(2848358..2848508,2849649..2849961,2850847..2850929,2851903..2851950,2854174..2854244,2854849..2854981,2856536..2856687,2857051..2857128,2857267..2857425,2857842..2858042,2858127..2858215,2859070..2859113,2859195..2859296,2860987..2861132,2861620..2861714,2862458..2862623)
location: region:2848358-2862623:1
so has part: feature:2848358-2848508:1:exon
so has part: feature:2849649-2849961:1:exon
so has part: feature:2850847-2850929:1:exon
so has part: feature:2851903-2851950:1:exon
so has part: feature:2854174-2854244:1:exon
so has part: feature:2854849-2854981:1:exon
so has part: feature:2856536-2856687:1:exon
so has part: feature:2857051-2857128:1:exon
so has part: feature:2857267-2857425:1:exon
so has part: feature:2857842-2858042:1:exon
so has part: feature:2858127-2858215:1:exon
so has part: feature:2859070-2859113:1:exon
so has part: feature:2859195-2859296:1:exon
so has part: feature:2860987-2861132:1:exon
so has part: feature:2861620-2861714:1:exon
so has part: feature:2862458-2862623:1:exon

XP_031410613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2848358-2848508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849649-2849961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2850847-2850929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2851903-2851950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2854174-2854244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2854849-2854981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2856536-2856687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2857051-2857128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2857267-2857425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2857842-2858042:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2858127-2858215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2859070-2859113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2859195-2859296:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2860987-2861132:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2861620-2861714:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2862458-2862623:1:exon

LOC104912245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent DNA helicase HFM1 isoform X4
translation: MLFPCIFYDRDLENNKSNIWWIAPAPAIDEIPPAEELQRELEKNAASSCMGGIKHQKFIQQCKSITEEVNNKSPVPTCFGTASEKEVLQLCVGGRTKKHGSLKMASMFLSPDQAKYKIGTEIFQQPDSNFSKTKILINFPENGDDESVHSTFRKSLFKMPDCMYKNTEFKERSTDMKEFNTHFNTSENMTEVKKNAWREDHQPPVTTDSGFILHRVNDGDMASKIGIKIKSLSSASKILDMTGTTGRNLEILRAVTEIPTQFRCIFKEFPYFNYAQSKALDDLLYTDRNFVICAPTGSGKTVMFELAITRLLMEVPMPWLNIKVVYMAPIKALCSQRFDDWKEKFGPIGLSCKELTGDTVVDDLFEIHHAHIIITTPEKWDSMTRRWKDNSIVQLVRLFLIDEVHVIKDESRGATLEVVVSRMKTVQSSLWRLSENHHVPPLRFVAVSATIPNAEDIAEWLSDGKIPAVCQKVDEDQRPVKLRKIVLGFPCSDSQTEFKFDLTLNYKIASVIQAYSDQKPVLVFCATRKGVQQAASVLSKDAKFLLNVEQKQRLQKSANSLKDSKLRDLLMYGVAYHHAGMELSDRKIIEGVFTAGDLPVLLVFILMSIYFDLV
SIO_010081: LOC104912245
subclass of: SO_0000673
so part of: LOC104912245
location: join(2848358..2848508,2849649..2849961,2850667..2850929,2851903..2851950,2854174..2854244,2854849..2854981,2856536..2856687,2857051..2857128,2857267..2857425,2857842..2858042,2858127..2858215,2859070..2859113,2859195..2859296,2860946..2860986)
location: region:2848358-2860986:1
so has part: feature:2848358-2848508:1:exon
so has part: feature:2849649-2849961:1:exon
so has part: feature:2850667-2850929:1:exon
so has part: feature:2851903-2851950:1:exon
so has part: feature:2854174-2854244:1:exon
so has part: feature:2854849-2854981:1:exon
so has part: feature:2856536-2856687:1:exon
so has part: feature:2857051-2857128:1:exon
so has part: feature:2857267-2857425:1:exon
so has part: feature:2857842-2858042:1:exon
so has part: feature:2858127-2858215:1:exon
so has part: feature:2859070-2859113:1:exon
so has part: feature:2859195-2859296:1:exon
so has part: feature:2860946-2860986:1:exon

XP_031410614.1
type: Protein
SIO_000068: ncbiprotein

position:2860986:1
position: 2860986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2848358-2848508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849649-2849961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2850667-2850929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2851903-2851950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2854174-2854244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2854849-2854981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2856536-2856687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2857051-2857128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2857267-2857425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2857842-2858042:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2858127-2858215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2859070-2859113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2859195-2859296:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2860946-2860986:1:exon

LOC104912245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912245
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ATP-dependent DNA helicase HFM1 isoform X5
translation: MLFPCIFYDRDLENNKSNIWWIAPAPAIDEIPPAEELQRELEKNAASSCMGGIKHQKFIQQCKSITEEVNNKSPVPTCFGTASEKEVLQLCVGGRTKKHGSLKMASMFLSPDQAKYKIGTEIFQQPDSNFSKTKILINFPENGDDESVHSTFRKSLFKMPDCMYKNTEFKERSTDMKEFNTHFNTSENMTEVKKNAWREDHQPPVTTDSGFILHRVNDGDMASKIGIKIKSLSSASKILDMTGTTGRNLEILRAVTEIPTQFRCIFKEFPYFNYAQSKALDDLLYTDRNFVICAPTGSGKTVMFELAITRLLMEVPMPWLNIKVVYMAPIKALCSQRFDDWKEKFGPIGLSCKELTGDTVVDDLFEIHHAHIIITTPEKWDSMTRRWKDNSIVQLVRLFLIDEVHVIKDESRGATLEVVVSRMKTVQSSLWRLSENHHVPPLRFVAVSATIPNAEDIAEWLSDGKIPAVCQKVDEDQRPVKLRKIVLGFPCSDSQTEFKFDLTLNYKIASVIQAYSDQKPVLVFCATRKGVQQAASVLSKDAKFLLNVEQKQRLQKSANSLKDSKLRVVFILMSIYFDLV
SIO_010081: LOC104912245
subclass of: SO_0000673
so part of: LOC104912245
location: join(2848358..2848508,2849649..2849961,2850667..2850929,2851903..2851950,2854174..2854244,2854849..2854981,2856536..2856687,2857051..2857128,2857267..2857425,2857842..2858042,2858127..2858215,2859070..2859113,2860946..2860986)
location: region:2848358-2860986:1
so has part: feature:2848358-2848508:1:exon
so has part: feature:2849649-2849961:1:exon
so has part: feature:2850667-2850929:1:exon
so has part: feature:2851903-2851950:1:exon
so has part: feature:2854174-2854244:1:exon
so has part: feature:2854849-2854981:1:exon
so has part: feature:2856536-2856687:1:exon
so has part: feature:2857051-2857128:1:exon
so has part: feature:2857267-2857425:1:exon
so has part: feature:2857842-2858042:1:exon
so has part: feature:2858127-2858215:1:exon
so has part: feature:2859070-2859113:1:exon
so has part: feature:2860946-2860986:1:exon

XP_031410615.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2848358-2848508:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2849649-2849961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2850667-2850929:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2851903-2851950:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2854174-2854244:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2854849-2854981:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2856536-2856687:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2857051-2857128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2857267-2857425:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2857842-2858042:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2858127-2858215:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2859070-2859113:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2860946-2860986:1:exon

LOC116216965
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116216965
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2863213..2868353
location: region:2863213-2868353:1
so has part: feature:2863213-2868353:1:exon
subclass of: SO_0000011

116216965
type: Gene
SIO_000068: ncbigene

position:2863213:1
position: 2863213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2868353:1
position: 2868353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2863213-2868353:1:exon

LOC116216965
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216965
product: uncharacterized LOC116216965, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_004160717.1
SIO_010081: LOC116216965
subclass of: SO_0000673
so part of: LOC116216965
location: join(2863213..2863506,2866041..2866914,2867224..2868353)
location: region:2863213-2868353:1
so has part: feature:2863213-2863506:1:exon
so has part: feature:2866041-2866914:1:exon
so has part: feature:2867224-2868353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2863213-2863506:1:exon

position:2863506:1
position: 2863506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2866041-2866914:1:exon

position:2866041:1
position: 2866041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2866914:1
position: 2866914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2867224-2868353:1:exon

position:2867224:1
position: 2867224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116216965
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216965
product: uncharacterized LOC116216965, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_004160716.1
SIO_010081: LOC116216965
subclass of: SO_0000673
so part of: LOC116216965
location: join(2863213..2863506,2866041..2866157,2866562..2868353)
location: region:2863213-2868353:1
so has part: feature:2863213-2863506:1:exon
so has part: feature:2866041-2866157:1:exon
so has part: feature:2866562-2868353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2863213-2863506:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2866041-2866157:1:exon

position:2866157:1
position: 2866157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2866562-2868353:1:exon

position:2866562:1
position: 2866562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116216965
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216965
product: uncharacterized LOC116216965, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XR_004160715.1
SIO_010081: LOC116216965
subclass of: SO_0000673
so part of: LOC116216965
location: join(2863213..2863506,2866041..2866157,2867224..2868353)
location: region:2863213-2868353:1
so has part: feature:2863213-2863506:1:exon
so has part: feature:2866041-2866157:1:exon
so has part: feature:2867224-2868353:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2863213-2863506:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2866041-2866157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2867224-2868353:1:exon

LOC104912247
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912247
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2872048..2885994
location: region:2872048-2885994:1
so has part: feature:2872048-2885994:1:exon
subclass of: SO_0000011

104912247
type: Gene
SIO_000068: ncbigene

position:2872048:1
position: 2872048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2885994:1
position: 2885994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2872048-2885994:1:exon

LOC104912247
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912247
product: uncharacterized LOC104912247, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XR_002117877.1
SIO_010081: LOC104912247
subclass of: SO_0000673
so part of: LOC104912247
location: join(2872048..2872099,2873865..2874022,2877168..2881835,2884943..2885994)
location: region:2872048-2885994:1
so has part: feature:2872048-2872099:1:exon
so has part: feature:2873865-2874022:1:exon
so has part: feature:2877168-2881835:1:exon
so has part: feature:2884943-2885994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2872048-2872099:1:exon

position:2872099:1
position: 2872099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2873865-2874022:1:exon

position:2873865:1
position: 2873865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2874022:1
position: 2874022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2877168-2881835:1:exon

position:2877168:1
position: 2877168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2881835:1
position: 2881835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2884943-2885994:1:exon

position:2884943:1
position: 2884943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912247
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912247
product: uncharacterized LOC104912247, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_794497.2
SIO_010081: LOC104912247
subclass of: SO_0000673
so part of: LOC104912247
location: join(2872048..2872099,2873865..2874022,2877168..2878576,2881740..2885994)
location: region:2872048-2885994:1
so has part: feature:2872048-2872099:1:exon
so has part: feature:2873865-2874022:1:exon
so has part: feature:2877168-2878576:1:exon
so has part: feature:2881740-2885994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2872048-2872099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2873865-2874022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2877168-2878576:1:exon

position:2878576:1
position: 2878576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2881740-2885994:1:exon

position:2881740:1
position: 2881740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912247
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912247
product: uncharacterized LOC104912247, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XR_002117878.1
SIO_010081: LOC104912247
subclass of: SO_0000673
so part of: LOC104912247
location: join(2872048..2872099,2873865..2874022,2877168..2878576,2884943..2885994)
location: region:2872048-2885994:1
so has part: feature:2872048-2872099:1:exon
so has part: feature:2873865-2874022:1:exon
so has part: feature:2877168-2878576:1:exon
so has part: feature:2884943-2885994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2872048-2872099:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2873865-2874022:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2877168-2878576:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2884943-2885994:1:exon

LOC100543059
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100543059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2886144..2894512)
location: region:2886144-2894512:-1
so has part: feature:2886144-2894512:-1:exon
subclass of: SO_0000010

100543059
type: Gene
SIO_000068: ncbigene

position:2886144:-1
position: 2886144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2894512:-1
position: 2894512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2886144-2894512:-1:exon

LOC100543059
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543059
product: cell division cycle 7-related protein kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_031554757.1
SIO_010081: LOC100543059
subclass of: SO_0000673
so part of: LOC100543059
location: complement(join(2886144..2886709,2887267..2887510,2888495..2888637,2888720..2888813,2889412..2889547,2891276..2891359,2893742..2894512))
location: region:2886144-2894512:-1
so has part: feature:2893742-2894512:-1:exon
so has part: feature:2891276-2891359:-1:exon
so has part: feature:2889412-2889547:-1:exon
so has part: feature:2888720-2888813:-1:exon
so has part: feature:2888495-2888637:-1:exon
so has part: feature:2887267-2887510:-1:exon
so has part: feature:2886144-2886709:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2893742-2894512:-1:exon

position:2893742:-1
position: 2893742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2891276-2891359:-1:exon

position:2891276:-1
position: 2891276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2891359:-1
position: 2891359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2889412-2889547:-1:exon

position:2889412:-1
position: 2889412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2889547:-1
position: 2889547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2888720-2888813:-1:exon

position:2888720:-1
position: 2888720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2888813:-1
position: 2888813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2888495-2888637:-1:exon

position:2888495:-1
position: 2888495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2888637:-1
position: 2888637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2887267-2887510:-1:exon

position:2887267:-1
position: 2887267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2887510:-1
position: 2887510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2886144-2886709:-1:exon

position:2886709:-1
position: 2886709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100543059
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543059
product: cell division cycle 7-related protein kinase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 105 samples with support for all annotated introns
transcript id: XM_031554756.1
SIO_010081: LOC100543059
subclass of: SO_0000673
so part of: LOC100543059
location: complement(join(2886146..2886709,2887267..2887510,2888495..2888637,2888720..2888813,2889412..2889547,2891276..2891362,2893742..2894512))
location: region:2886146-2894512:-1
so has part: feature:2893742-2894512:-1:exon
so has part: feature:2891276-2891362:-1:exon
so has part: feature:2889412-2889547:-1:exon
so has part: feature:2888720-2888813:-1:exon
so has part: feature:2888495-2888637:-1:exon
so has part: feature:2887267-2887510:-1:exon
so has part: feature:2886146-2886709:-1:exon

position:2886146:-1
position: 2886146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893742-2894512:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2891276-2891362:-1:exon

position:2891362:-1
position: 2891362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2889412-2889547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2888720-2888813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2888495-2888637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2887267-2887510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2886146-2886709:-1:exon

LOC100543059
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle 7-related protein kinase isoform X2
translation: MFAPSSVQKWFSGSWIFFFSFVMETESKSHCDEQHPHQAEDTSRKLAQSSKLSGIKKDIEKLYEAVPQLVNVFKIKEKIGEGTFSSVYLATAQLQTGCEEKMALKHLIPTSHPLRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIVMPYLEHESFLDILNSLSFEEVKEYMFNLFKALRRIHHFGIVHRDVKPSNFLYNRRLKQYALVDFGLAQGTPDTKIELLKTAHSEGQQGSYSQSNPSIALGNGASVAVTAPKQIPQQLASRASDKSSHSKIQIKQGRGGKEDSVHHSAQRSVFGERNFNIYCSTYQENSNTKVRNKTHQ
SIO_010081: LOC100543059
subclass of: SO_0000673
so part of: LOC100543059
location: complement(join(2886590..2886709,2887267..2887510,2888495..2888637,2888720..2888813,2889412..2889547,2891276..2891359,2893742..2893901))
location: region:2886590-2893901:-1
so has part: feature:2893742-2893901:-1:exon
so has part: feature:2891276-2891359:-1:exon
so has part: feature:2889412-2889547:-1:exon
so has part: feature:2888720-2888813:-1:exon
so has part: feature:2888495-2888637:-1:exon
so has part: feature:2887267-2887510:-1:exon
so has part: feature:2886590-2886709:-1:exon

XP_031410617.1
type: Protein
SIO_000068: ncbiprotein

position:2886590:-1
position: 2886590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2893901:-1
position: 2893901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2893742-2893901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2891276-2891359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2889412-2889547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2888720-2888813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2888495-2888637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2887267-2887510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2886590-2886709:-1:exon

LOC100543059
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle 7-related protein kinase isoform X1
translation: MFAPSSVQKWFSGSWIFFFSFVMETESKSHCDEQHPHQAEDTSRKLAQSSKLSAGIKKDIEKLYEAVPQLVNVFKIKEKIGEGTFSSVYLATAQLQTGCEEKMALKHLIPTSHPLRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIVMPYLEHESFLDILNSLSFEEVKEYMFNLFKALRRIHHFGIVHRDVKPSNFLYNRRLKQYALVDFGLAQGTPDTKIELLKTAHSEGQQGSYSQSNPSIALGNGASVAVTAPKQIPQQLASRASDKSSHSKIQIKQGRGGKEDSVHHSAQRSVFGERNFNIYCSTYQENSNTKVRNKTHQ
SIO_010081: LOC100543059
subclass of: SO_0000673
so part of: LOC100543059
location: complement(join(2886590..2886709,2887267..2887510,2888495..2888637,2888720..2888813,2889412..2889547,2891276..2891362,2893742..2893901))
location: region:2886590-2893901:-1
so has part: feature:2893742-2893901:-1:exon
so has part: feature:2891276-2891362:-1:exon
so has part: feature:2889412-2889547:-1:exon
so has part: feature:2888720-2888813:-1:exon
so has part: feature:2888495-2888637:-1:exon
so has part: feature:2887267-2887510:-1:exon
so has part: feature:2886590-2886709:-1:exon

XP_031410616.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2893742-2893901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2891276-2891362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2889412-2889547:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2888720-2888813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2888495-2888637:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2887267-2887510:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2886590-2886709:-1:exon

LOC104912361
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2936061..>2942961)
location: region:2936061-2942961:-1
so has part: feature:2936061-2942961:-1:exon
subclass of: SO_0000010

104912361
type: Gene
SIO_000068: ncbigene

position:2936061:-1
position: 2936061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2942961:-1
position: 2942961
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2936061-2942961:-1:exon

LOC104912361
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912361
product: cell division cycle 7-related protein kinase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 151 samples with support for all annotated introns
transcript id: XM_010715843.3
SIO_010081: LOC104912361
subclass of: SO_0000673
so part of: LOC104912361
location: complement(join(2936061..2937163,2938127..2938276,2941132..2941214,2942768..>2942961))
location: region:2936061-2942961:-1
so has part: feature:2942768-2942961:-1:exon
so has part: feature:2941132-2941214:-1:exon
so has part: feature:2938127-2938276:-1:exon
so has part: feature:2936061-2937163:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2942768-2942961:-1:exon

position:2942768:-1
position: 2942768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2941132-2941214:-1:exon

position:2941132:-1
position: 2941132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2941214:-1
position: 2941214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2938127-2938276:-1:exon

position:2938127:-1
position: 2938127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2938276:-1
position: 2938276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2936061-2937163:-1:exon

position:2937163:-1
position: 2937163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912361
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912361
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell division cycle 7-related protein kinase-like
translation: LLKNTSVLQLIKQSKMIDVSSRKLVTKKKIISTKAVSRKAASGCPSNLTCDCYATDRVCSVCLSRCQQVAPRAGTPGFRAPEVLTKCPTQTTAIDMWSAGIVFLSLLSGRYPFYKASDDLTALAQIMTVRGSRETIQAAKTFGKSVLCTQVVPAQNLRTLCEKLRGTNSSCNRSQGDVPSKSGDNTALPVEVDKQCAPETIREEIQHLKSCQEDDGASEIKVTDMKGWDQVPDEAYDLLDKLLDLNPATRITAKDALLHPFFKDMRL
SIO_010081: LOC104912361
subclass of: SO_0000673
so part of: LOC104912361
location: complement(join(2936787..2937163,2938127..2938276,2941132..2941214,2942768..>2942961))
location: region:2936787-2942961:-1
so has part: feature:2942768-2942961:-1:exon
so has part: feature:2941132-2941214:-1:exon
so has part: feature:2938127-2938276:-1:exon
so has part: feature:2936787-2937163:-1:exon

XP_010714145.3
type: Protein
SIO_000068: ncbiprotein

position:2936787:-1
position: 2936787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2942768-2942961:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2941132-2941214:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2938127-2938276:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2936787-2937163:-1:exon

LOC104912248
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2943728..2961126
location: region:2943728-2961126:1
so has part: feature:2943728-2961126:1:exon
subclass of: SO_0000010

104912248
type: Gene
SIO_000068: ncbigene

position:2943728:1
position: 2943728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2961126:1
position: 2961126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2943728-2961126:1:exon

LOC104912248
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912248
product: transforming growth factor beta receptor type 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 198 samples with support for all annotated introns
transcript id: XM_010715564.3
SIO_010081: LOC104912248
subclass of: SO_0000673
so part of: LOC104912248
location: join(2943728..2944057,2944898..2945015,2948770..2948805,2950901..2951008,2957326..2961126)
location: region:2943728-2961126:1
so has part: feature:2943728-2944057:1:exon
so has part: feature:2944898-2945015:1:exon
so has part: feature:2948770-2948805:1:exon
so has part: feature:2950901-2951008:1:exon
so has part: feature:2957326-2961126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2943728-2944057:1:exon

position:2944057:1
position: 2944057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2944898-2945015:1:exon

position:2944898:1
position: 2944898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2945015:1
position: 2945015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2948770-2948805:1:exon

position:2948770:1
position: 2948770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2948805:1
position: 2948805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2950901-2951008:1:exon

position:2950901:1
position: 2950901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2951008:1
position: 2951008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2957326-2961126:1:exon

position:2957326:1
position: 2957326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912248
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912248
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor beta receptor type 3-like
translation: MSFFLLQVSVTKADRSLGFAIQTCFVSPFSNPDRMSDYTIIENICPKDESVKFYSTEKLNFPIAHAQKDKKRFSFVFKPIFNISLLFLHCELTLCTNKDKDTQRLPKCVPPDEACTSLNVDMILAMMHNKKTFTKPLVITHEGKLEDSSLPKSNVRQPSVFYGLDTLTVVGIAFAAFVIGALLTGALWFIYSHTGEAAGRRQVPTSPPASENSSAAHSIGSTQSTPCSSSSAT
SIO_010081: LOC104912248
subclass of: SO_0000673
so part of: LOC104912248
location: join(2943737..2944057,2944898..2945015,2948770..2948805,2950901..2951008,2957326..2957444)
location: region:2943737-2957444:1
so has part: feature:2943737-2944057:1:exon
so has part: feature:2944898-2945015:1:exon
so has part: feature:2948770-2948805:1:exon
so has part: feature:2950901-2951008:1:exon
so has part: feature:2957326-2957444:1:exon

XP_010713866.1
type: Protein
SIO_000068: ncbiprotein

position:2943737:1
position: 2943737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2957444:1
position: 2957444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2943737-2944057:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2944898-2945015:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2948770-2948805:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2950901-2951008:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2957326-2957444:1:exon

LOC100543835
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100543835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2964153..3010610
location: region:2964153-3010610:1
so has part: feature:2964153-3010610:1:exon
subclass of: SO_0000010

100543835
type: Gene
SIO_000068: ncbigene

position:2964153:1
position: 2964153
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:3010610:1
position: 3010610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2964153-3010610:1:exon

LOC100543835
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100543835
product: transforming growth factor beta receptor type 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 184 samples with support for all annotated introns
transcript id: XM_019618350.1
SIO_010081: LOC100543835
subclass of: SO_0000673
so part of: LOC100543835
location: join(<2964153..2964347,2981219..2981356,2993133..2993316,2998981..2999149,3001393..3001540,3005699..3005888,3007063..3007373,3008146..3008295,3010023..3010154,3010407..3010610)
location: region:2964153-3010610:1
so has part: feature:2964153-2964347:1:exon
so has part: feature:2981219-2981356:1:exon
so has part: feature:2993133-2993316:1:exon
so has part: feature:2998981-2999149:1:exon
so has part: feature:3001393-3001540:1:exon
so has part: feature:3005699-3005888:1:exon
so has part: feature:3007063-3007373:1:exon
so has part: feature:3008146-3008295:1:exon
so has part: feature:3010023-3010154:1:exon
so has part: feature:3010407-3010610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2964153-2964347:1:exon

position:2964347:1
position: 2964347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2981219-2981356:1:exon

position:2981219:1
position: 2981219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2981356:1
position: 2981356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2993133-2993316:1:exon

position:2993133:1
position: 2993133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2993316:1
position: 2993316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2998981-2999149:1:exon

position:2998981:1
position: 2998981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2999149:1
position: 2999149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3001393-3001540:1:exon

position:3001393:1
position: 3001393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3001540:1
position: 3001540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3005699-3005888:1:exon

position:3005699:1
position: 3005699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3005888:1
position: 3005888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3007063-3007373:1:exon

position:3007063:1
position: 3007063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3007373:1
position: 3007373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3008146-3008295:1:exon

position:3008146:1
position: 3008146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3008295:1
position: 3008295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3010023-3010154:1:exon

position:3010023:1
position: 3010023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3010154:1
position: 3010154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3010407-3010610:1:exon

position:3010407:1
position: 3010407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100543835
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100543835
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor beta receptor type 3
translation: SPAGPVPRSECVLSPVNSSHPVHALLESFTVLSGCASRGTTGLPQEVHVLNLRNPEEGLDHHEREVTLHLTPISSVHIHQKPLVFLLNSPLPLVWKLKTERLAPGIRRVFFVSSGSIVWFEKGNFSLSAEMEEKNFPERNEHLLQWAQKEYGAVTSFTELKISRNIYIKVGEDQVFPPTCNIEKNFLSLNYLAGYLQPKRAEGCLISNLAQEREVHIIELITPNSNPYSAFQVDIIVDIKPSQPGAKLDRNVVLILKCKKSVNWVIKSHDVQGKLEVITSNSIGFGKETERSMAMSKSVIPNIPSSHESLIKWAYEHKYSPVTSYTKAPVANRFHLQLEHTEEMNDEEDHSLPPELTELLHGAKNPALSDGLTFPFHINRGGHDTGGEGIFPSRDSVDTLINHDFEHSLSKHKEPEEVQGSADVALSIKCDDKVMTVAVEKDSLQASGYTRTELSLLDHSCKARMNGTHFILESLPNKCGTRTSYILDKIVYFNSIVIQLSSPAEGSSFDDDDMESGDNGFPGDADEGDVTFSSWPEIAFNCTLHQPEKDFFNPAMFWPPEPHITNVTFNMELYKTDLFLAPSQGLFSVAENGPIYVEVTN
SIO_010081: LOC100543835
subclass of: SO_0000673
so part of: LOC100543835
location: join(<2964153..2964347,2981219..2981356,2993133..2993316,2998981..2999149,3001393..3001540,3005699..3005888,3007063..3007373,3008146..3008295,3010023..3010154,3010407..3010595)
location: region:2964153-3010595:1
so has part: feature:2964153-2964347:1:exon
so has part: feature:2981219-2981356:1:exon
so has part: feature:2993133-2993316:1:exon
so has part: feature:2998981-2999149:1:exon
so has part: feature:3001393-3001540:1:exon
so has part: feature:3005699-3005888:1:exon
so has part: feature:3007063-3007373:1:exon
so has part: feature:3008146-3008295:1:exon
so has part: feature:3010023-3010154:1:exon
so has part: feature:3010407-3010595:1:exon

XP_019473895.1
type: Protein
SIO_000068: ncbiprotein

position:3010595:1
position: 3010595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2964153-2964347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2981219-2981356:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2993133-2993316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2998981-2999149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3001393-3001540:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3005699-3005888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3007063-3007373:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3008146-3008295:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3010023-3010154:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3010407-3010595:1:exon

LOC104912249
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912249
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3066828..3074339
location: region:3066828-3074339:1
so has part: feature:3066828-3074339:1:exon
subclass of: SO_0000011

104912249
type: Gene
SIO_000068: ncbigene

position:3066828:1
position: 3066828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074339:1
position: 3074339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3066828-3074339:1:exon

LOC104912249
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912249
product: uncharacterized LOC104912249
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002117882.2
SIO_010081: LOC104912249
subclass of: SO_0000673
so part of: LOC104912249
location: join(3066828..3068936,3069413..3069827,3070193..3070255,3070350..3072633,3074190..3074339)
location: region:3066828-3074339:1
so has part: feature:3066828-3068936:1:exon
so has part: feature:3069413-3069827:1:exon
so has part: feature:3070193-3070255:1:exon
so has part: feature:3070350-3072633:1:exon
so has part: feature:3074190-3074339:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3066828-3068936:1:exon

position:3068936:1
position: 3068936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3069413-3069827:1:exon

position:3069413:1
position: 3069413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3069827:1
position: 3069827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3070193-3070255:1:exon

position:3070193:1
position: 3070193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3070255:1
position: 3070255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3070350-3072633:1:exon

position:3070350:1
position: 3070350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3072633:1
position: 3072633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3074190-3074339:1:exon

position:3074190:1
position: 3074190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100542906
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100542906
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3074504..3090083)
location: region:3074504-3090083:-1
so has part: feature:3074504-3090083:-1:exon
subclass of: SO_0000010

100542906
type: Gene
SIO_000068: ncbigene

position:3074504:-1
position: 3074504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3090083:-1
position: 3090083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3074504-3090083:-1:exon

LOC100542906
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100542906
product: bromodomain-containing protein 3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010715565.3
SIO_010081: LOC100542906
subclass of: SO_0000673
so part of: LOC100542906
location: complement(join(3074504..3074755,3075968..3076080,3076281..3076473,3077576..3077643,3078545..3078670,3079705..3079818,3079916..3080208,3080282..3080462,3081749..3081937,3082127..3082255,3082857..3083228,3084327..3084499,3085723..3085849,3086532..3086669,3087532..3087776,3089628..3090083))
location: region:3074504-3090083:-1
so has part: feature:3089628-3090083:-1:exon
so has part: feature:3087532-3087776:-1:exon
so has part: feature:3086532-3086669:-1:exon
so has part: feature:3085723-3085849:-1:exon
so has part: feature:3084327-3084499:-1:exon
so has part: feature:3082857-3083228:-1:exon
so has part: feature:3082127-3082255:-1:exon
so has part: feature:3081749-3081937:-1:exon
so has part: feature:3080282-3080462:-1:exon
so has part: feature:3079916-3080208:-1:exon
so has part: feature:3079705-3079818:-1:exon
so has part: feature:3078545-3078670:-1:exon
so has part: feature:3077576-3077643:-1:exon
so has part: feature:3076281-3076473:-1:exon
so has part: feature:3075968-3076080:-1:exon
so has part: feature:3074504-3074755:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3089628-3090083:-1:exon

position:3089628:-1
position: 3089628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3087532-3087776:-1:exon

position:3087532:-1
position: 3087532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3087776:-1
position: 3087776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3086532-3086669:-1:exon

position:3086532:-1
position: 3086532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3086669:-1
position: 3086669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3085723-3085849:-1:exon

position:3085723:-1
position: 3085723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3085849:-1
position: 3085849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3084327-3084499:-1:exon

position:3084327:-1
position: 3084327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3084499:-1
position: 3084499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3082857-3083228:-1:exon

position:3082857:-1
position: 3082857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3083228:-1
position: 3083228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3082127-3082255:-1:exon

position:3082127:-1
position: 3082127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3082255:-1
position: 3082255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3081749-3081937:-1:exon

position:3081749:-1
position: 3081749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3081937:-1
position: 3081937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3080282-3080462:-1:exon

position:3080282:-1
position: 3080282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3080462:-1
position: 3080462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3079916-3080208:-1:exon

position:3079916:-1
position: 3079916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3080208:-1
position: 3080208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3079705-3079818:-1:exon

position:3079705:-1
position: 3079705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3079818:-1
position: 3079818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3078545-3078670:-1:exon

position:3078545:-1
position: 3078545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3078670:-1
position: 3078670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3077576-3077643:-1:exon

position:3077576:-1
position: 3077576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3077643:-1
position: 3077643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3076281-3076473:-1:exon

position:3076281:-1
position: 3076281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3076473:-1
position: 3076473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3075968-3076080:-1:exon

position:3075968:-1
position: 3075968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3076080:-1
position: 3076080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3074504-3074755:-1:exon

position:3074755:-1
position: 3074755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100542906
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100542906
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: bromodomain-containing protein 3-like
translation: MCNEDLGTSGCMFLLKMPLPSQRHSLITNPPPPEYINSKNNGCQTNQLQYLQRVVMRAMWRHNFSWPFHQPVDAAALNLPDYYSIIKKPMDLSTIKKRLEHNYYTKAAECIDDFKTMFLNCYIYNKPGDDIVFMAQELEKVFMQKIAQMPPEEILIPDKGKRKEKLSEEPQQPNSGTSSKQRTRQKQAESGEQPTAITEELQKATLPPLSAAQLTALMPAAIPITKTKKGVKRKADTTTPTTSVLTTSSESSATCNERKTVKTCKGENECMIPKKILKKGLPDSQQSPKVLKKIQLSKQLKYCNEILKEMFSKKHSAYAWPFLKSADVVSFSLGEKKGITKCPADLGTIKKKMDNFEYRDIQEFATDVRLMFMNCYKHNSPDHEVVAMAKKLQDVFETHFAKIPDEPATSVLLPQHTREITKAYSSDSSSDDSSEEKSSEDFEKKRTVYLAKLQEQLKAVHQQLQALTRASLPRXEKEKEKAKREKGKNKEKAKASLIQKKKDLKHKNSKKKQSSNIQSKKTIRQVLLAHKSEDDDGAKPMTYDEKRQLSLNINKLPGDKLGKVVHIIQSREPSLRNSSPDEIEIDFETLKASTLRELEKYVATCLRKRPRKQHAKKTMKSKQQLLSERKQELEKRLLHVNGQLNPKKENFKFESNAESSIRPSRLSESSNSSTSSGSSTSSASSSSDSSDSESVTETCSEQNGMRQNCLTSLEQPKRTSPCIQRMSYNAVLQVQPSSVASSLQNHGSPEPQLLSPIVLQKLKSLQSRSLKSAEQNAKSPSGMLAGVCALHDTSVKQMPQTAPRTDQPFDTQCTQAVPEVPNTTSPVDNGDGTKAEKMLVNLDEVQSKACERTADSISISQEQSMYCHNQN
SIO_010081: LOC100542906
subclass of: SO_0000673
so part of: LOC100542906
location: complement(join(3074597..3074755,3075968..3076080,3076281..3076473,3077576..3077643,3078545..3078670,3079705..3079818,3079916..3080208,3080282..3080462,3081749..3081937,3082127..3082255,3082857..3083228,3084327..3084499,3085723..3085849,3086532..3086669,3087532..3087771))
location: region:3074597-3087771:-1
so has part: feature:3087532-3087771:-1:exon
so has part: feature:3086532-3086669:-1:exon
so has part: feature:3085723-3085849:-1:exon
so has part: feature:3084327-3084499:-1:exon
so has part: feature:3082857-3083228:-1:exon
so has part: feature:3082127-3082255:-1:exon
so has part: feature:3081749-3081937:-1:exon
so has part: feature:3080282-3080462:-1:exon
so has part: feature:3079916-3080208:-1:exon
so has part: feature:3079705-3079818:-1:exon
so has part: feature:3078545-3078670:-1:exon
so has part: feature:3077576-3077643:-1:exon
so has part: feature:3076281-3076473:-1:exon
so has part: feature:3075968-3076080:-1:exon
so has part: feature:3074597-3074755:-1:exon

XP_010713867.2
type: Protein
SIO_000068: ncbiprotein

position:3074597:-1
position: 3074597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3087771:-1
position: 3087771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3087532-3087771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3086532-3086669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3085723-3085849:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3084327-3084499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3082857-3083228:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3082127-3082255:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3081749-3081937:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3080282-3080462:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3079916-3080208:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3079705-3079818:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3078545-3078670:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3077576-3077643:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3076281-3076473:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3075968-3076080:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3074597-3074755:-1:exon

LOC104912250
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3099805..3103094)
location: region:3099805-3103094:-1
so has part: feature:3099805-3103094:-1:exon
subclass of: SO_0000010

104912250
type: Gene
SIO_000068: ncbigene

position:3099805:-1
position: 3099805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3103094:-1
position: 3103094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3099805-3103094:-1:exon

LOC104912250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912250
product: bromodomain testis-specific protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010715566.3
SIO_010081: LOC104912250
subclass of: SO_0000673
so part of: LOC104912250
location: complement(join(3099805..3100472,3101192..3101354,3102454..3102602,3102981..3103094))
location: region:3099805-3103094:-1
so has part: feature:3102981-3103094:-1:exon
so has part: feature:3102454-3102602:-1:exon
so has part: feature:3101192-3101354:-1:exon
so has part: feature:3099805-3100472:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3102981-3103094:-1:exon

position:3102981:-1
position: 3102981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3102454-3102602:-1:exon

position:3102454:-1
position: 3102454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3102602:-1
position: 3102602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3101192-3101354:-1:exon

position:3101192:-1
position: 3101192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3101354:-1
position: 3101354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3099805-3100472:-1:exon

position:3100472:-1
position: 3100472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: bromodomain testis-specific protein-like
translation: MNKKPIFILPSGHCNTPNVTKTLETKSQSVPERAAGIKNVDSWVSLCKMMMLPAPIKSSAESFKHFRKVALQKAAGQAQEKERVHKGTGLDATAMKDFKPPKEEDMRKQLPEAEQHPLVQDRNLARKMEQERRRKEAMACTIDMNLQSDIMATFEENLE
SIO_010081: LOC104912250
subclass of: SO_0000673
so part of: LOC104912250
location: complement(join(3100404..3100472,3101192..3101354,3102454..3102602,3102981..3103079))
location: region:3100404-3103079:-1
so has part: feature:3102981-3103079:-1:exon
so has part: feature:3102454-3102602:-1:exon
so has part: feature:3101192-3101354:-1:exon
so has part: feature:3100404-3100472:-1:exon

XP_010713868.2
type: Protein
SIO_000068: ncbiprotein

position:3100404:-1
position: 3100404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3103079:-1
position: 3103079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3102981-3103079:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3102454-3102602:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3101192-3101354:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3100404-3100472:-1:exon

LOC109369194
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369194
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3105897..3111839)
location: region:3105897-3111839:-1
so has part: feature:3105897-3111839:-1:exon
subclass of: SO_0000011

109369194
type: Gene
SIO_000068: ncbigene

position:3105897:-1
position: 3105897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3111839:-1
position: 3111839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3105897-3111839:-1:exon

LOC109369194
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369194
product: uncharacterized LOC109369194
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_002117883.2
SIO_010081: LOC109369194
subclass of: SO_0000673
so part of: LOC109369194
location: complement(join(3105897..3106053,3109463..3109548,3111697..3111839))
location: region:3105897-3111839:-1
so has part: feature:3111697-3111839:-1:exon
so has part: feature:3109463-3109548:-1:exon
so has part: feature:3105897-3106053:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3111697-3111839:-1:exon

position:3111697:-1
position: 3111697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3109463-3109548:-1:exon

position:3109463:-1
position: 3109463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3109548:-1
position: 3109548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3105897-3106053:-1:exon

position:3106053:-1
position: 3106053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHX4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: EPHX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3112501..>3119666)
location: region:3112501-3119666:-1
so has part: feature:3112501-3119666:-1:exon
subclass of: SO_0000010

100542749
type: Gene
SIO_000068: ncbigene

position:3112501:-1
position: 3112501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3119666:-1
position: 3119666
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3112501-3119666:-1:exon

EPHX4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: EPHX4
product: epoxide hydrolase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_019618351.2
SIO_010081: EPHX4
subclass of: SO_0000673
so part of: EPHX4
location: complement(join(3112501..3113412,3116605..3116753,3117586..3117689,3119498..>3119666))
location: region:3112501-3119666:-1
so has part: feature:3119498-3119666:-1:exon
so has part: feature:3117586-3117689:-1:exon
so has part: feature:3116605-3116753:-1:exon
so has part: feature:3112501-3113412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3119498-3119666:-1:exon

position:3119498:-1
position: 3119498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3117586-3117689:-1:exon

position:3117586:-1
position: 3117586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3117689:-1
position: 3117689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3116605-3116753:-1:exon

position:3116605:-1
position: 3116605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116753:-1
position: 3116753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3112501-3113412:-1:exon

position:3113412:-1
position: 3113412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHX4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: EPHX4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epoxide hydrolase 4
translation: FTEKNPQICVYVVGYNKCVLIGHDWGGMIAWLVAICYPEMVTKLIVVNFPHPSVFTEYILRHPSQLIKSGYYFFFQMPWFPEFMFTVNDFKVLKSLFTSQTTGIGRKGCRLTAEDIEAYLYVFSQPGALTGPINHYRNIFSCLPLQHHEVIMPTLLLWGERDAFMEVEMAEITRIYVKNHFRLTILSEASHWLQQDQPDIVNKLIWTFLKEDTTRKRE
SIO_010081: EPHX4
subclass of: SO_0000673
so part of: EPHX4
location: complement(join(3113178..3113412,3116605..3116753,3117586..3117689,3119498..>3119666))
location: region:3113178-3119666:-1
so has part: feature:3119498-3119666:-1:exon
so has part: feature:3117586-3117689:-1:exon
so has part: feature:3116605-3116753:-1:exon
so has part: feature:3113178-3113412:-1:exon

XP_019473896.1
type: Protein
SIO_000068: ncbiprotein

position:3113178:-1
position: 3113178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3119498-3119666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3117586-3117689:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3116605-3116753:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3113178-3113412:-1:exon

LOC109369195
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369195
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3128090..3151965
location: region:3128090-3151965:1
so has part: feature:3128090-3151965:1:exon
subclass of: SO_0000011

109369195
type: Gene
SIO_000068: ncbigene

position:3128090:1
position: 3128090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3151965:1
position: 3151965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3128090-3151965:1:exon

LOC109369195
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369195
product: uncharacterized LOC109369195
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_002117885.2
SIO_010081: LOC109369195
subclass of: SO_0000673
so part of: LOC109369195
location: join(3128090..3128183,3128614..3128706,3150954..3151965)
location: region:3128090-3151965:1
so has part: feature:3128090-3128183:1:exon
so has part: feature:3128614-3128706:1:exon
so has part: feature:3150954-3151965:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3128090-3128183:1:exon

position:3128183:1
position: 3128183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3128614-3128706:1:exon

position:3128614:1
position: 3128614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3128706:1
position: 3128706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3150954-3151965:1:exon

position:3150954:1
position: 3150954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100542592
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100542592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3130354..3158588)
location: region:3130354-3158588:-1
so has part: feature:3130354-3158588:-1:exon
subclass of: SO_0000010

100542592
type: Gene
SIO_000068: ncbigene

position:3130354:-1
position: 3130354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3158588:-1
position: 3158588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3130354-3158588:-1:exon

LOC100542592
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100542592
product: AP2-interacting clathrin-endocytosis protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010715567.3
SIO_010081: LOC100542592
subclass of: SO_0000673
so part of: LOC100542592
location: complement(join(3130354..3136608,3137939..3140287,3141375..3141544,3142126..3142213,3142609..3143245,3144207..3144268,3146777..3146906,3147967..3148104,3148851..3149033,3152093..3152195,3152406..3152494,3153111..3153207,3154203..3154283,3155586..3155675,3158410..3158588))
location: region:3130354-3158588:-1
so has part: feature:3158410-3158588:-1:exon
so has part: feature:3155586-3155675:-1:exon
so has part: feature:3154203-3154283:-1:exon
so has part: feature:3153111-3153207:-1:exon
so has part: feature:3152406-3152494:-1:exon
so has part: feature:3152093-3152195:-1:exon
so has part: feature:3148851-3149033:-1:exon
so has part: feature:3147967-3148104:-1:exon
so has part: feature:3146777-3146906:-1:exon
so has part: feature:3144207-3144268:-1:exon
so has part: feature:3142609-3143245:-1:exon
so has part: feature:3142126-3142213:-1:exon
so has part: feature:3141375-3141544:-1:exon
so has part: feature:3137939-3140287:-1:exon
so has part: feature:3130354-3136608:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3158410-3158588:-1:exon

position:3158410:-1
position: 3158410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3155586-3155675:-1:exon

position:3155586:-1
position: 3155586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3155675:-1
position: 3155675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3154203-3154283:-1:exon

position:3154203:-1
position: 3154203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3154283:-1
position: 3154283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3153111-3153207:-1:exon

position:3153111:-1
position: 3153111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3153207:-1
position: 3153207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3152406-3152494:-1:exon

position:3152406:-1
position: 3152406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3152494:-1
position: 3152494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3152093-3152195:-1:exon

position:3152093:-1
position: 3152093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3152195:-1
position: 3152195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3148851-3149033:-1:exon

position:3148851:-1
position: 3148851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3149033:-1
position: 3149033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3147967-3148104:-1:exon

position:3147967:-1
position: 3147967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3148104:-1
position: 3148104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3146777-3146906:-1:exon

position:3146777:-1
position: 3146777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3146906:-1
position: 3146906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3144207-3144268:-1:exon

position:3144207:-1
position: 3144207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3144268:-1
position: 3144268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3142609-3143245:-1:exon

position:3142609:-1
position: 3142609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3143245:-1
position: 3143245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3142126-3142213:-1:exon

position:3142126:-1
position: 3142126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3142213:-1
position: 3142213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3141375-3141544:-1:exon

position:3141375:-1
position: 3141375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3141544:-1
position: 3141544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3137939-3140287:-1:exon

position:3137939:-1
position: 3137939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3140287:-1
position: 3140287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3130354-3136608:-1:exon

position:3136608:-1
position: 3136608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100542592
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100542592
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP2-interacting clathrin-endocytosis protein
translation: MYTRQSENGYFSPPAGNSKLETASALGDDLLRLYKKRCCPDINICIEGKDFQAHRAILCARSSYFAAMLSGSWAESSQEHITLQGLSHIEMSVILHFIYGAILDFPDEVDVGRMLGIADMYGLDGLKEVAIYILKRDYCNFFQKPIPGKQQPVLECMAIAHSLGVEHLYAACMKWVGKYFAKCLSERSFASLSTELQNNCLVMLIKSLSHKNVASLLMESDRLINSLPQVKWTERAVAVASRLQEECLTFIVANFLHVVQSEGFYILLQAQAMSSKPDLLELIFNAIEKNTNNENSCFLLVAVDTLLDSTDVKELGFTCKIQALRDKLWVFLVQSFYAVRHTEGWKLMRPDHQQKIQAAAFDKGDDRRLGKKPVFTSSQLNKSITEFAGKRNISWTEHGKKDCWGNSPTNRDKMKSDGLGASGHASSTNRNATNKTSKHEDVKGKDGKKTVSKLNKDLKPGEKAASPKARAVIKTKVENNGNAKAESMLAKQDTEKTSTSSGQKNSGSVKGLKNHEGKTAGARPKVLTVTSSVPSKTKPLKKNTGKESPSTTTAAGTSSKLTNSSTDIQAASEQTEESKEEKLAEEGKKHTVIMKSSLKTPNGVTNKKKKADLEVNVTTSSLKIMQIIYLQSNKKTAGKLSSEQNAQAVLKKKGNGSSNAAAQQKAQDTPTHSPKNQGAMGESPNSLKSGVSPKHNEERNVAQHLVQTTPPEKHPSAKKKSIKSSQTPVAKATAKIITPKAQALSKHGEITNNKDPKPKTAGQSVLKSQSSTPKHSRCESPVVQKNMHTSEHRSPGQKLGKNAADVATVQPHDNECSSAKQSKCLKSVMGGSREDEFLAACQPDKQKLLDPEDGEYKIQSKSPLVIGETVSKLHVSLQNEMEAREICGDQAEINQNKERNLADNTAEFCSHAKSTSDGYSDFSKETNQNAATSEELVEQSKAKKVCTEQSDQLSTDTGLNHGENILPSFSKGITNKEDVTSPPHVHMKGFRPADESCGASALPEYKSVTVDLDDVSKHSIEQIRDKCSHNYTESIDPTEMPENHENAEIPFVDHWNTGALDPKESPESDTGSATTSSDDIKPRSEDYDAGGSQDDEGSNERGISKCSTMLCHDFLGRSSSDTSTPEELKIYDSSLRIEVKMKKEGSDLFRVNSTSDDEIPRKKPEIWSHQESARNSTREPENSNFGSAQFTQEADQVSSSADETEDDRSEPENVAGNILSSNVPAQQFQGIDNLAFEDATENATASQEFSKTKSFKRSVLLSVDECEELGSDDRVETHTSRQHSIDSLTPSDVFDSVSQEHHGKTFYSGYSLEIEDGFLDCKQPKDQDNRMDESESSLQHLRGTEIPGKEDKGASMTEQNRAEEVHSVASPCPGENEKVNTKNEVATEFQQCNKYLDNDAKSQERPCHLNLHQRETNADVQKSNSAKPVEASKNQILTQESQVRDSQPAPTEYANTDLLPGDIDDYDTMAQTCMYEHRPSKTLSPIYEMDVGEAIEQRMDSETAVLDVDFEDQQFVEQDWTLLRQLLSDQDSNIGFKNSVPEDLNLAQCLINQTLFLARDGSNPQGTSQVDTFSRWTELMSPLDDSSASITVASFSSEDCSSPQGEWTILELETHH
SIO_010081: LOC100542592
subclass of: SO_0000673
so part of: LOC100542592
location: complement(join(3136139..3136608,3137939..3140287,3141375..3141544,3142126..3142213,3142609..3143245,3144207..3144268,3146777..3146906,3147967..3148104,3148851..3149033,3152093..3152195,3152406..3152494,3153111..3153207,3154203..3154283,3155586..3155675,3158410..3158573))
location: region:3136139-3158573:-1
so has part: feature:3158410-3158573:-1:exon
so has part: feature:3155586-3155675:-1:exon
so has part: feature:3154203-3154283:-1:exon
so has part: feature:3153111-3153207:-1:exon
so has part: feature:3152406-3152494:-1:exon
so has part: feature:3152093-3152195:-1:exon
so has part: feature:3148851-3149033:-1:exon
so has part: feature:3147967-3148104:-1:exon
so has part: feature:3146777-3146906:-1:exon
so has part: feature:3144207-3144268:-1:exon
so has part: feature:3142609-3143245:-1:exon
so has part: feature:3142126-3142213:-1:exon
so has part: feature:3141375-3141544:-1:exon
so has part: feature:3137939-3140287:-1:exon
so has part: feature:3136139-3136608:-1:exon

XP_010713869.2
type: Protein
SIO_000068: ncbiprotein

position:3136139:-1
position: 3136139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3158573:-1
position: 3158573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3158410-3158573:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3155586-3155675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3154203-3154283:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3153111-3153207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3152406-3152494:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3152093-3152195:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3148851-3149033:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3147967-3148104:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3146777-3146906:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3144207-3144268:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3142609-3143245:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3142126-3142213:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3141375-3141544:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3137939-3140287:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3136139-3136608:-1:exon

GLMN
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GLMN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3159187..3177890
location: region:3159187-3177890:1
so has part: feature:3159187-3177890:1:exon
subclass of: SO_0000010

100542283
type: Gene
SIO_000068: ncbigene

position:3159187:1
position: 3159187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3177890:1
position: 3177890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3159187-3177890:1:exon

GLMN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GLMN
product: glomulin, FKBP associated protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 167 samples with support for all annotated introns
transcript id: XM_010715570.3
SIO_010081: GLMN
subclass of: SO_0000673
so part of: GLMN
location: join(3159187..3159366,3160557..3160631,3161561..3161686,3161777..3161896,3162815..3162923,3163980..3164226,3164696..3164795,3166364..3166551,3166985..3167038,3167945..3167975,3168342..3168431,3168804..3168845,3168957..3169030,3169311..3169395,3171830..3171939,3172828..3172891,3175130..3175253,3176595..3176677,3176800..3177890)
location: region:3159187-3177890:1
so has part: feature:3159187-3159366:1:exon
so has part: feature:3160557-3160631:1:exon
so has part: feature:3161561-3161686:1:exon
so has part: feature:3161777-3161896:1:exon
so has part: feature:3162815-3162923:1:exon
so has part: feature:3163980-3164226:1:exon
so has part: feature:3164696-3164795:1:exon
so has part: feature:3166364-3166551:1:exon
so has part: feature:3166985-3167038:1:exon
so has part: feature:3167945-3167975:1:exon
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urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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urn:…
SIO_000300: 6
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