Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 9, Turkey_5.1, whole genome shotgun sequence.
type: Entry
definition: Meleagris gallopavo isolate NT-WF06-2002-E0010 breed Aviagen turkey brand Nicholas breeding stock chromosome 9, Turkey_5.1, whole genome shotgun sequence.
sequence version: NC_015019.2
sequence date: 2019-11-19
sequence: sequence
division: CON
label: NC_015019.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA62397
dblink: SAMN02981253
keyword: WGS
keyword: RefSeq
source: Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
references: 20838655
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000970.2.\nOn Dec 18, 2014 this sequence version replaced NC_015019.1.\nAssembly name: Turkey_5.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Turkey Genome Consortium on\n2014/11/24. The original whole-genome shotgun project has the\naccession ADDD00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Turkey Genome Consortium\nAssembly Date :: 2013\nAssembly Method :: MaSuRCA v. 1.9.2\nAssembly Name :: Turkey_5.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 35.0x\nSequencing Technology :: Illumina GAII; Sanger; 454\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Meleagris gallopavo Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 19076383
topology: linear
so has quality: SO_0000987
location: 1..19076383
location: region:1-19076383:1
RO_0002162: 9103

NC_015019
type: RefSeq
SIO_000068: refseq

PRJNA62397
type: BioProject
SIO_000068: bioproject

SAMN02981253
type: BioSample
SIO_000068: biosample

1
title: Multi-platform next-generation sequencing of the domestic turkey (Meleagris gallopavo): genome assembly and analysis
author: Dalloul, R.A.
author: Long, J.A.
author: Zimin, A.V.
author: Aslam, L.
author: Beal, K.
author: Blomberg Le Ann
author: Bouffard, P.
author: Burt, D.W.
author: Crasta, O.
author: Crooijmans, R.P.
author: Cooper, K.
author: Coulombe, R.A.
author: De, S.
author: Delany, M.E.
author: Dodgson, J.B.
author: Dong, J.J.
author: Evans, C.
author: Frederickson, K.M.
author: Flicek, P.
author: Florea, L.
author: Folkerts, O.
author: Groenen, M.A.
author: Harkins, T.T.
author: Herrero, J.
author: Hoffmann, S.
author: Megens, H.J.
author: Jiang, A.
author: de Jong, P.
author: Kaiser, P.
author: Kim, H.
author: Kim, K.W.
author: Kim, S.
author: Langenberger, D.
author: Lee, M.K.
author: Lee, T.
author: Mane, S.
author: Marcais, G.
author: Marz, M.
author: McElroy, A.P.
author: Modise, T.
author: Nefedov, M.
author: Notredame, C.
author: Paton, I.R.
author: Payne, W.S.
author: Pertea, G.
author: Prickett, D.
author: Puiu, D.
author: Qioa, D.
author: Raineri, E.
author: Ruffier, M.
author: Salzberg, S.L.
author: Schatz, M.C.
author: Scheuring, C.
author: Schmidt, C.J.
author: Schroeder, S.
author: Searle, S.M.
author: Smith, E.J.
author: Smith, J.
author: Sonstegard, T.S.
author: Stadler, P.F.
author: Tafer, H.
author: Tu, Z.J.
author: Van Tassell, C.P.
author: Vilella, A.J.
author: Williams, K.P.
author: Yorke, J.A.
author: Zhang, L.
author: Zhang, H.B.
author: Zhang, X.
author: Zhang, Y.
author: Reed, K.M.
journal: PLoS Biol. 8 (9) (2010)
pubmed: 20838655

20838655
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:19076383:1
position: 19076383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-19076383:1:source
so part of: sequence
organism: Meleagris gallopavo
mol type: genomic DNA
isolate: NT-WF06-2002-E0010
chromosome: 9
sex: female
tissue type: blood
breed: Aviagen turkey brand Nicholas breeding stock
note: donated by Nicholas Turkey Breeding Farms

9103
type: Taxonomy
SIO_000068: taxonomy

SLC6A14
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC6A14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4..12798
location: region:4-12798:1
so has part: feature:4-12798:1:exon
subclass of: SO_0000010

100546046
type: Gene
SIO_000068: ncbigene

position:4:1
position: 4
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12798:1
position: 12798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4-12798:1:exon

SLC6A14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC6A14
product: solute carrier family 6 member 14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_010714963.3
SIO_010081: SLC6A14
subclass of: SO_0000673
so part of: SLC6A14
location: join(4..51,675..843,2484..2615,4059..4220,5090..5225,5916..6048,7826..7966,8941..9169,9251..9376,9471..9589,10794..10893,11139..11248,12421..12798)
location: region:4-12798:1
so has part: feature:4-51:1:exon
so has part: feature:675-843:1:exon
so has part: feature:2484-2615:1:exon
so has part: feature:4059-4220:1:exon
so has part: feature:5090-5225:1:exon
so has part: feature:5916-6048:1:exon
so has part: feature:7826-7966:1:exon
so has part: feature:8941-9169:1:exon
so has part: feature:9251-9376:1:exon
so has part: feature:9471-9589:1:exon
so has part: feature:10794-10893:1:exon
so has part: feature:11139-11248:1:exon
so has part: feature:12421-12798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4-51:1:exon

position:51:1
position: 51
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:675-843:1:exon

position:675:1
position: 675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:843:1
position: 843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2484-2615:1:exon

position:2484:1
position: 2484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2615:1
position: 2615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4059-4220:1:exon

position:4059:1
position: 4059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4220:1
position: 4220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5090-5225:1:exon

position:5090:1
position: 5090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5225:1
position: 5225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5916-6048:1:exon

position:5916:1
position: 5916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6048:1
position: 6048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7826-7966:1:exon

position:7826:1
position: 7826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7966:1
position: 7966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8941-9169:1:exon

position:8941:1
position: 8941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9169:1
position: 9169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9251-9376:1:exon

position:9251:1
position: 9251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9376:1
position: 9376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9471-9589:1:exon

position:9471:1
position: 9471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9589:1
position: 9589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10794-10893:1:exon

position:10794:1
position: 10794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10893:1
position: 10893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:11139-11248:1:exon

position:11139:1
position: 11139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11248:1
position: 11248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:12421-12798:1:exon

position:12421:1
position: 12421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC6A14
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC6A14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium- and chloride-dependent neutral and basic amino acid transporter B(0+)
translation: MGMLSLPGFLSCGKKKDFSLSNEKDAHVSDNDENSDRGNWSNKADYLLSMVGYAVGLGNVWRFPYLTYQNGGGAFLIPYTLMLALAGLPLFFMECSLGQFASLGPISIWRILPLFQGVGITMVIISTFVAIYYNVIIAYALYYLFASFQKVLPWSDCFSWADEFCSKTRLVKDCNATLDGEIIHANYSFITSNNLTCINDTINYKPVQFPSEQYWNKVALQRSPGLDETGNIVWYLALCLLLSWMIVGAALFKGIKSSGKVVYFTALFPYVILLILLVRGATLEGALDGIEYYIGKQSNITKLMEAEVWKDAATQIFYSLSVAWGGLVALSSYNKFHNNCYSDAIFVCVTNCLTSVFAGFAIFSVLGHMAFVLKRPVSEVVDSGFDLAFVAYPEALSKLPVSPLWSFLFFFMLLLLGLDSQFATIETLTTTIQDIYPKMMKKLRIPITLGVCVLLFFLGLICVTQAGIYWVNLIDHFCAGWGILFAAVLEIIGIVYIYGGNRFIEDIEMMIGKKSCFFWMWWRMCWFFITPVLLVAILVWSLVTFSAPTYGSVLYPTWGTAVGWCMIIFCVIWIPIVAVVKILKAEGNLFQVRIQHSGHCPQFCFSWHCQECLCLFLKSMLNISRFYHLDLYTKPHLW
SIO_010081: SLC6A14
subclass of: SO_0000673
so part of: SLC6A14
location: join(4..51,675..843,2484..2615,4059..4220,5090..5225,5916..6048,7826..7966,8941..9169,9251..9376,9471..9589,10794..10893,11139..11248,12421..12732)
location: region:4-12732:1
so has part: feature:4-51:1:exon
so has part: feature:675-843:1:exon
so has part: feature:2484-2615:1:exon
so has part: feature:4059-4220:1:exon
so has part: feature:5090-5225:1:exon
so has part: feature:5916-6048:1:exon
so has part: feature:7826-7966:1:exon
so has part: feature:8941-9169:1:exon
so has part: feature:9251-9376:1:exon
so has part: feature:9471-9589:1:exon
so has part: feature:10794-10893:1:exon
so has part: feature:11139-11248:1:exon
so has part: feature:12421-12732:1:exon

XP_010713265.1
type: Protein
SIO_000068: ncbiprotein

position:12732:1
position: 12732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4-51:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:675-843:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2484-2615:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4059-4220:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5090-5225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5916-6048:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7826-7966:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8941-9169:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9251-9376:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9471-9589:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10794-10893:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:11139-11248:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12421-12732:1:exon

LOC100545275
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100545275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 28395..46084
location: region:28395-46084:1
so has part: feature:28395-46084:1:exon
subclass of: SO_0000010

100545275
type: Gene
SIO_000068: ncbigene

position:28395:1
position: 28395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:46084:1
position: 46084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28395-46084:1:exon

LOC100545275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545275
product: plastin-3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010714964.3
SIO_010081: LOC100545275
subclass of: SO_0000673
so part of: LOC100545275
location: join(28395..28504,33410..33573,35666..35795,36237..36369,37151..37232,37885..38050,38668..38810,39822..39917,40429..40624,41216..41294,41914..42028,42173..42306,43164..43287,43776..43900,44722..46084)
location: region:28395-46084:1
so has part: feature:28395-28504:1:exon
so has part: feature:33410-33573:1:exon
so has part: feature:35666-35795:1:exon
so has part: feature:36237-36369:1:exon
so has part: feature:37151-37232:1:exon
so has part: feature:37885-38050:1:exon
so has part: feature:38668-38810:1:exon
so has part: feature:39822-39917:1:exon
so has part: feature:40429-40624:1:exon
so has part: feature:41216-41294:1:exon
so has part: feature:41914-42028:1:exon
so has part: feature:42173-42306:1:exon
so has part: feature:43164-43287:1:exon
so has part: feature:43776-43900:1:exon
so has part: feature:44722-46084:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:28395-28504:1:exon

position:28504:1
position: 28504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:33410-33573:1:exon

position:33410:1
position: 33410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33573:1
position: 33573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:35666-35795:1:exon

position:35666:1
position: 35666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35795:1
position: 35795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:36237-36369:1:exon

position:36237:1
position: 36237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:36369:1
position: 36369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:37151-37232:1:exon

position:37151:1
position: 37151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37232:1
position: 37232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:37885-38050:1:exon

position:37885:1
position: 37885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38050:1
position: 38050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:38668-38810:1:exon

position:38668:1
position: 38668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:38810:1
position: 38810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:39822-39917:1:exon

position:39822:1
position: 39822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:39917:1
position: 39917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:40429-40624:1:exon

position:40429:1
position: 40429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40624:1
position: 40624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:41216-41294:1:exon

position:41216:1
position: 41216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41294:1
position: 41294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:41914-42028:1:exon

position:41914:1
position: 41914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42028:1
position: 42028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:42173-42306:1:exon

position:42173:1
position: 42173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42306:1
position: 42306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:43164-43287:1:exon

position:43164:1
position: 43164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43287:1
position: 43287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:43776-43900:1:exon

position:43776:1
position: 43776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43900:1
position: 43900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:44722-46084:1:exon

position:44722:1
position: 44722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100545275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plastin-3
translation: MAVTMQISKDELEELKEAFAKVDLNSNGFICDYELHELFKEANLPLPGYKVREIIQKLMIDSDKNKDGKISFEEFVYIFQEVKSSDIAKTFRKAINRKEGICAIGGTSELSSEGTQHSYSEEEKYAFVNWINKALENDADCRHVIPMNPNTDDLFKAVGDGIVLCKMINLSVPDTIDERAINKKKLTPFIIQENLNLALNSASAIGCHVVNIGAEDLREGKPHLVLGLLWQIIKIGLFADIELSRNEALAALLRDGENLEDLMKLSPEELLLRWANFHLENAGWHKINNFSTDIKDSRAYFHLLNQIAPKGQKEGEPQIDINMSGFNEKDDLRRAEYMLQQADRLGCRQFVTPADVVSGNPKLNLAFVANLFNKYPALTKPENQDIDWTLLEGETREERTFRNWMNSLGVNPHVNHLYGDLQDALVILQLYEKIKVPVDWNKVNKPPYPKLGANMKKLENCNYAVDLGKHPAKFSLVGIGGQDLNDGNPTLTLALVWQLMRRYTLNVLEDLGDGQKANDDIIVNWVNQTLKEAGKSTSIQNFKDKTISTSLAVVDLIDAIQPGCINYDLVKTGHLSEDDKQNNAKYAVSMARRIGARVYALPEDLVEVKPKMVMTVFACLMGRGMKRV
SIO_010081: LOC100545275
subclass of: SO_0000673
so part of: LOC100545275
location: join(28438..28504,33410..33573,35666..35795,36237..36369,37151..37232,37885..38050,38668..38810,39822..39917,40429..40624,41216..41294,41914..42028,42173..42306,43164..43287,43776..43900,44722..44854)
location: region:28438-44854:1
so has part: feature:28438-28504:1:exon
so has part: feature:33410-33573:1:exon
so has part: feature:35666-35795:1:exon
so has part: feature:36237-36369:1:exon
so has part: feature:37151-37232:1:exon
so has part: feature:37885-38050:1:exon
so has part: feature:38668-38810:1:exon
so has part: feature:39822-39917:1:exon
so has part: feature:40429-40624:1:exon
so has part: feature:41216-41294:1:exon
so has part: feature:41914-42028:1:exon
so has part: feature:42173-42306:1:exon
so has part: feature:43164-43287:1:exon
so has part: feature:43776-43900:1:exon
so has part: feature:44722-44854:1:exon

XP_010713266.1
type: Protein
SIO_000068: ncbiprotein

position:28438:1
position: 28438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:44854:1
position: 44854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28438-28504:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:33410-33573:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:35666-35795:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:36237-36369:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:37151-37232:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:37885-38050:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:38668-38810:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:39822-39917:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:40429-40624:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:41216-41294:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:41914-42028:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:42173-42306:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:43164-43287:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:43776-43900:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:44722-44854:1:exon

LOC104912136
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(54353..55558)
location: region:54353-55558:-1
so has part: feature:54353-55558:-1:exon
subclass of: SO_0000010

104912136
type: Gene
SIO_000068: ncbigene

position:54353:-1
position: 54353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:55558:-1
position: 55558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54353-55558:-1:exon

LOC104912136
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912136
product: nyctalopin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_010715126.3
SIO_010081: LOC104912136
subclass of: SO_0000673
so part of: LOC104912136
location: complement(54353..55558)
location: region:54353-55558:-1
so has part: feature:54353-55558:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54353-55558:-1:exon

LOC104912136
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912136
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nyctalopin-like
translation: MCKCAPEEVIHCNRAGLRALPGEIAASTVSLNLSNNYLRILTTNTFRNLTFLHSLWLDGNNLTFLSPGTFHALSKLRELDLSRNSRLTYLHANTFRGLSNLISLDMSHCNIFEIHPLLFSHLPSLERLNLASNNMRYVPQAFSNLSSLTRLSLESNHIEAIGRDSLKDLESLYDLNLRKNRIWIIQNGAFTKLLRLGVLNLGHNFIADLPNQLFDGLIQLKTMHLEANRITDVDCTFRLLLNLRNLYLNNNQISSISGSAFSYLNKLHFLHLSKNNLSSLPLRLFVELPKLKHVFLSHNPWKCDCKMFWFLRWTAMFRGALEGLDCAFPSRHNTTGLGVPQPGDPMDCTAPPELESKDKCGAAGISKAPGPHAPTSKVFLLVVTCHTWYFARRWESSAALL
SIO_010081: LOC104912136
subclass of: SO_0000673
so part of: LOC104912136
location: complement(54353..55558)
location: region:54353-55558:-1
so has part: feature:54353-55558:-1:exon

XP_010713428.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:54353-55558:-1:exon

AGTR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: AGTR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 61052..67025
location: region:61052-67025:1
so has part: feature:61052-67025:1:exon
subclass of: SO_0000010

100545892
type: Gene
SIO_000068: ncbigene

position:61052:1
position: 61052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:67025:1
position: 67025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:61052-67025:1:exon

AGTR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: AGTR2
product: angiotensin II receptor type 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_010714965.3
SIO_010081: AGTR2
subclass of: SO_0000673
so part of: AGTR2
location: join(61052..61647,63287..67025)
location: region:61052-67025:1
so has part: feature:61052-61647:1:exon
so has part: feature:63287-67025:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:61052-61647:1:exon

position:61647:1
position: 61647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:63287-67025:1:exon

position:63287:1
position: 63287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AGTR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: AGTR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type-2 angiotensin II receptor
translation: MQSNYSMVITTRETLQIFYTAQANSSAALRSPPPCPLTSSNYQFSLIPAFFSVVFALGLVGNSVVVVVLCHRSSPKTVANIYIFNLAMADLLCLATLPFWATYYAQGYNWIFGSLMCKISSSVLCLNMFASIFFITCMSVDRYHAIVHPIRSQRRTPHQAYFIALVVWGLACLSSLPTFYFRDTHYIKSMEVKACIMAFPHESYAEWSVGTAFLKNALGFFIPLTVITTCYVWIRRHLIKAREFGKNKQKRDKVLKLVAAVVVAFLICWLPFHILTFLDALAHMNVIDNCDVTGIIDTALPFGICMAFANSCINPLVYCFIGNQFQEKLHRLFKRQVYQFNSQRESSSLRKGSCLRDTEIAVGREREPESLL
SIO_010081: AGTR2
subclass of: SO_0000673
so part of: AGTR2
location: 63360..64478
location: region:63360-64478:1
so has part: feature:63360-64478:1:exon

XP_010713267.1
type: Protein
SIO_000068: ncbiprotein

position:63360:1
position: 63360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:64478:1
position: 64478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:63360-64478:1:exon

LOC100545741
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100545741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 136250..148503
location: region:136250-148503:1
so has part: feature:136250-148503:1:exon
subclass of: SO_0000010

100545741
type: Gene
SIO_000068: ncbigene

position:136250:1
position: 136250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148503:1
position: 148503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136250-148503:1:exon

LOC100545741
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545741
product: UAP56-interacting factor-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_010714966.1
SIO_010081: LOC100545741
subclass of: SO_0000673
so part of: LOC100545741
location: join(136250..136285,138768..138911,142175..142317,144186..144310,145024..145105,145376..145419,145505..145579,146579..146690,147424..148503)
location: region:136250-148503:1
so has part: feature:136250-136285:1:exon
so has part: feature:138768-138911:1:exon
so has part: feature:142175-142317:1:exon
so has part: feature:144186-144310:1:exon
so has part: feature:145024-145105:1:exon
so has part: feature:145376-145419:1:exon
so has part: feature:145505-145579:1:exon
so has part: feature:146579-146690:1:exon
so has part: feature:147424-148503:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136250-136285:1:exon

position:136285:1
position: 136285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:138768-138911:1:exon

position:138768:1
position: 138768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138911:1
position: 138911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:142175-142317:1:exon

position:142175:1
position: 142175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142317:1
position: 142317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:144186-144310:1:exon

position:144186:1
position: 144186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:144310:1
position: 144310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:145024-145105:1:exon

position:145024:1
position: 145024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145105:1
position: 145105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:145376-145419:1:exon

position:145376:1
position: 145376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145419:1
position: 145419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:145505-145579:1:exon

position:145505:1
position: 145505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145579:1
position: 145579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:146579-146690:1:exon

position:146579:1
position: 146579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:146690:1
position: 146690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:147424-148503:1:exon

position:147424:1
position: 147424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100545741
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UAP56-interacting factor-like
translation: MSLDDIIKRHRKEQTDAKAAGDGRRQQTKNRNLAYGFGRPRSRAWMQRNLQGPNRFRRGFGQQQNNRRQFRNALPGPRRRAAAALSGVSPLNRPASAQEVNKSEDAFPKSSSGQPEARRRPPPGPRRFRAAAASTSAPGRRPFLLNRGPGFQQKRMQQRFSKAYIQRGQMDANAEGKPPRMRRWQVKPSPGAVLTVSVANPQASQTNTPGAKRPFLRSQRPPPRITKPQPKGVMLRFNFRAMANQTSLTLDERFSGLRNKRRFAAARSARRTVTMP
SIO_010081: LOC100545741
subclass of: SO_0000673
so part of: LOC100545741
location: join(136276..136285,138768..138911,142175..142317,144186..144310,145024..145105,145376..145419,145505..145579,146579..146690,147424..147519)
location: region:136276-147519:1
so has part: feature:136276-136285:1:exon
so has part: feature:138768-138911:1:exon
so has part: feature:142175-142317:1:exon
so has part: feature:144186-144310:1:exon
so has part: feature:145024-145105:1:exon
so has part: feature:145376-145419:1:exon
so has part: feature:145505-145579:1:exon
so has part: feature:146579-146690:1:exon
so has part: feature:147424-147519:1:exon

XP_010713268.1
type: Protein
SIO_000068: ncbiprotein

position:136276:1
position: 136276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147519:1
position: 147519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:136276-136285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:138768-138911:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:142175-142317:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:144186-144310:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:145024-145105:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:145376-145419:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:145505-145579:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:146579-146690:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:147424-147519:1:exon

LRCH2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LRCH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(177435..200377)
location: region:177435-200377:-1
so has part: feature:177435-200377:-1:exon
subclass of: SO_0000010

100545587
type: Gene
SIO_000068: ncbigene

position:177435:-1
position: 177435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200377:-1
position: 200377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177435-200377:-1:exon

LRCH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LRCH2
product: leucine rich repeats and calponin homology domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031554609.1
SIO_010081: LRCH2
subclass of: SO_0000673
so part of: LRCH2
location: complement(join(177435..179541,179934..180011,180313..180450,180932..181044,182464..182521,183588..183638,184045..184089,186820..186936,187986..188034,188999..189067,192207..192284,193245..193349,193526..193593,193676..193773,194072..194183,194518..194605,194943..195076,195285..195421,195516..195621,197531..197657,200236..200377))
location: region:177435-200377:-1
so has part: feature:200236-200377:-1:exon
so has part: feature:197531-197657:-1:exon
so has part: feature:195516-195621:-1:exon
so has part: feature:195285-195421:-1:exon
so has part: feature:194943-195076:-1:exon
so has part: feature:194518-194605:-1:exon
so has part: feature:194072-194183:-1:exon
so has part: feature:193676-193773:-1:exon
so has part: feature:193526-193593:-1:exon
so has part: feature:193245-193349:-1:exon
so has part: feature:192207-192284:-1:exon
so has part: feature:188999-189067:-1:exon
so has part: feature:187986-188034:-1:exon
so has part: feature:186820-186936:-1:exon
so has part: feature:184045-184089:-1:exon
so has part: feature:183588-183638:-1:exon
so has part: feature:182464-182521:-1:exon
so has part: feature:180932-181044:-1:exon
so has part: feature:180313-180450:-1:exon
so has part: feature:179934-180011:-1:exon
so has part: feature:177435-179541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200236-200377:-1:exon

position:200236:-1
position: 200236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:197531-197657:-1:exon

position:197531:-1
position: 197531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197657:-1
position: 197657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:195516-195621:-1:exon

position:195516:-1
position: 195516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195621:-1
position: 195621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:195285-195421:-1:exon

position:195285:-1
position: 195285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195421:-1
position: 195421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:194943-195076:-1:exon

position:194943:-1
position: 194943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:195076:-1
position: 195076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:194518-194605:-1:exon

position:194518:-1
position: 194518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194605:-1
position: 194605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:194072-194183:-1:exon

position:194072:-1
position: 194072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194183:-1
position: 194183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:193676-193773:-1:exon

position:193676:-1
position: 193676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193773:-1
position: 193773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:193526-193593:-1:exon

position:193526:-1
position: 193526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193593:-1
position: 193593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:193245-193349:-1:exon

position:193245:-1
position: 193245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:193349:-1
position: 193349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:192207-192284:-1:exon

position:192207:-1
position: 192207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:192284:-1
position: 192284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:188999-189067:-1:exon

position:188999:-1
position: 188999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:189067:-1
position: 189067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:187986-188034:-1:exon

position:187986:-1
position: 187986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:188034:-1
position: 188034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:186820-186936:-1:exon

position:186820:-1
position: 186820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:186936:-1
position: 186936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:184045-184089:-1:exon

position:184045:-1
position: 184045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184089:-1
position: 184089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:183588-183638:-1:exon

position:183588:-1
position: 183588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:183638:-1
position: 183638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:182464-182521:-1:exon

position:182464:-1
position: 182464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:182521:-1
position: 182521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:180932-181044:-1:exon

position:180932:-1
position: 180932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181044:-1
position: 181044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:180313-180450:-1:exon

position:180313:-1
position: 180313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180450:-1
position: 180450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:179934-180011:-1:exon

position:179934:-1
position: 179934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:180011:-1
position: 180011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:177435-179541:-1:exon

position:179541:-1
position: 179541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRCH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LRCH2
product: leucine rich repeats and calponin homology domain containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 143 samples with support for all annotated introns
transcript id: XM_031554611.1
SIO_010081: LRCH2
subclass of: SO_0000673
so part of: LRCH2
location: complement(join(177435..179541,179934..180011,180313..180450,180932..181044,182464..182521,183588..183638,184045..184089,186820..186936,187986..188034,188999..189067,193245..193349,193526..193593,193676..193773,194072..194183,194518..194608,194943..195076,195285..195421,195516..195621,197531..197657,200236..200377))
location: region:177435-200377:-1
so has part: feature:200236-200377:-1:exon
so has part: feature:197531-197657:-1:exon
so has part: feature:195516-195621:-1:exon
so has part: feature:195285-195421:-1:exon
so has part: feature:194943-195076:-1:exon
so has part: feature:194518-194608:-1:exon
so has part: feature:194072-194183:-1:exon
so has part: feature:193676-193773:-1:exon
so has part: feature:193526-193593:-1:exon
so has part: feature:193245-193349:-1:exon
so has part: feature:188999-189067:-1:exon
so has part: feature:187986-188034:-1:exon
so has part: feature:186820-186936:-1:exon
so has part: feature:184045-184089:-1:exon
so has part: feature:183588-183638:-1:exon
so has part: feature:182464-182521:-1:exon
so has part: feature:180932-181044:-1:exon
so has part: feature:180313-180450:-1:exon
so has part: feature:179934-180011:-1:exon
so has part: feature:177435-179541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200236-200377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197531-197657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195516-195621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195285-195421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194943-195076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194518-194608:-1:exon

position:194608:-1
position: 194608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:194072-194183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193676-193773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193526-193593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193245-193349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188999-189067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:187986-188034:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:186820-186936:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:184045-184089:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:183588-183638:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182464-182521:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:180932-181044:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:180313-180450:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:179934-180011:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177435-179541:-1:exon

LRCH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LRCH2
product: leucine rich repeats and calponin homology domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031554610.1
SIO_010081: LRCH2
subclass of: SO_0000673
so part of: LRCH2
location: complement(join(177435..179541,179934..180011,180313..180450,180932..181044,182464..182521,184045..184089,186820..186936,187986..188034,188999..189067,192207..192284,193245..193349,193526..193593,193676..193773,194072..194183,194518..194608,194943..195076,195285..195421,195516..195621,197531..197657,200236..200377))
location: region:177435-200377:-1
so has part: feature:200236-200377:-1:exon
so has part: feature:197531-197657:-1:exon
so has part: feature:195516-195621:-1:exon
so has part: feature:195285-195421:-1:exon
so has part: feature:194943-195076:-1:exon
so has part: feature:194518-194608:-1:exon
so has part: feature:194072-194183:-1:exon
so has part: feature:193676-193773:-1:exon
so has part: feature:193526-193593:-1:exon
so has part: feature:193245-193349:-1:exon
so has part: feature:192207-192284:-1:exon
so has part: feature:188999-189067:-1:exon
so has part: feature:187986-188034:-1:exon
so has part: feature:186820-186936:-1:exon
so has part: feature:184045-184089:-1:exon
so has part: feature:182464-182521:-1:exon
so has part: feature:180932-181044:-1:exon
so has part: feature:180313-180450:-1:exon
so has part: feature:179934-180011:-1:exon
so has part: feature:177435-179541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200236-200377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197531-197657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195516-195621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195285-195421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194943-195076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194518-194608:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194072-194183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193676-193773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193526-193593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193245-193349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192207-192284:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188999-189067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:187986-188034:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:186820-186936:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:184045-184089:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182464-182521:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:180932-181044:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:180313-180450:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:179934-180011:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:177435-179541:-1:exon

LRCH2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LRCH2
product: leucine rich repeats and calponin homology domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_031554608.1
SIO_010081: LRCH2
subclass of: SO_0000673
so part of: LRCH2
location: complement(join(177435..179541,179934..180011,180313..180450,180932..181044,182464..182521,183588..183638,184045..184089,186820..186936,187986..188034,188999..189067,192207..192284,193245..193349,193526..193593,193676..193773,194072..194183,194518..194608,194943..195076,195285..195421,195516..195621,197531..197657,200236..200377))
location: region:177435-200377:-1
so has part: feature:200236-200377:-1:exon
so has part: feature:197531-197657:-1:exon
so has part: feature:195516-195621:-1:exon
so has part: feature:195285-195421:-1:exon
so has part: feature:194943-195076:-1:exon
so has part: feature:194518-194608:-1:exon
so has part: feature:194072-194183:-1:exon
so has part: feature:193676-193773:-1:exon
so has part: feature:193526-193593:-1:exon
so has part: feature:193245-193349:-1:exon
so has part: feature:192207-192284:-1:exon
so has part: feature:188999-189067:-1:exon
so has part: feature:187986-188034:-1:exon
so has part: feature:186820-186936:-1:exon
so has part: feature:184045-184089:-1:exon
so has part: feature:183588-183638:-1:exon
so has part: feature:182464-182521:-1:exon
so has part: feature:180932-181044:-1:exon
so has part: feature:180313-180450:-1:exon
so has part: feature:179934-180011:-1:exon
so has part: feature:177435-179541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:200236-200377:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197531-197657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195516-195621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195285-195421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194943-195076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194518-194608:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194072-194183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193676-193773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193526-193593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193245-193349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192207-192284:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188999-189067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:187986-188034:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:186820-186936:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:184045-184089:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183588-183638:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:182464-182521:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:180932-181044:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:180313-180450:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:179934-180011:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:177435-179541:-1:exon

LRCH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LRCH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and calponin homology domain-containing protein 2 isoform X2
translation: MLTYLNISRNLLSTLPKYLFDLPLKVLVVSNNKLVSIPEEIGKLRDLMELDISCNELQVLPQQIGKLQSLRELNIRRNNLHMLPDELGDLPLVKLDFSCNKITEIPICYRKLRHLQVIVLDNNPMQIPPAQICLKGKVHIFKFLSIQACLRIDKKPDSLDLPSLGKRIPSQPLTDSIEDFYPNKNHGPDSGIGSDNGDKRLSTTEPSDDDTISLHSQVSESTREQTLRNDNHVMGNKLDPQKDQEVYDYIDPNAEEGAVPEQGDVQIGPLLSYIKERGKHPEKSQKIEHNEDWGDEKRLQKEQLLAEEDDEIKEVTDLRKIAAQLLQQEQKHRRRPLSYRTSFSEKLFQRTRAAGRASRLLNHSASVSTRNRPKQPVESEKCVSTDEVNSPVSPYSWQPLENQKDSVDDQRWPETQPIIWQNEERRRSKQIRKEYFKYKSSRKSSSGNENDEQDSDNTNVSPQSPVSSEDYERTDSNTHGPFGLKPRSAFSRAARQDYGAMDPGFTMRRKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLDACKKLGVPQERLCLPHHILEERGLVKVGLTVQALLELPTLKVSQLSAM
SIO_010081: LRCH2
subclass of: SO_0000673
so part of: LRCH2
location: complement(join(179422..179541,179934..180011,180313..180450,180932..181044,182464..182521,183588..183638,184045..184089,186820..186936,187986..188034,188999..189067,192207..192284,193245..193349,193526..193593,193676..193773,194072..194183,194518..194605,194943..195076,195285..195421,195516..195621,197531..197657,200236..200258))
location: region:179422-200258:-1
so has part: feature:200236-200258:-1:exon
so has part: feature:197531-197657:-1:exon
so has part: feature:195516-195621:-1:exon
so has part: feature:195285-195421:-1:exon
so has part: feature:194943-195076:-1:exon
so has part: feature:194518-194605:-1:exon
so has part: feature:194072-194183:-1:exon
so has part: feature:193676-193773:-1:exon
so has part: feature:193526-193593:-1:exon
so has part: feature:193245-193349:-1:exon
so has part: feature:192207-192284:-1:exon
so has part: feature:188999-189067:-1:exon
so has part: feature:187986-188034:-1:exon
so has part: feature:186820-186936:-1:exon
so has part: feature:184045-184089:-1:exon
so has part: feature:183588-183638:-1:exon
so has part: feature:182464-182521:-1:exon
so has part: feature:180932-181044:-1:exon
so has part: feature:180313-180450:-1:exon
so has part: feature:179934-180011:-1:exon
so has part: feature:179422-179541:-1:exon

XP_031410469.1
type: Protein
SIO_000068: ncbiprotein

position:179422:-1
position: 179422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200258:-1
position: 200258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:200236-200258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197531-197657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195516-195621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195285-195421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194943-195076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194518-194605:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194072-194183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193676-193773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193526-193593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193245-193349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192207-192284:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188999-189067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:187986-188034:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:186820-186936:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:184045-184089:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183588-183638:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:182464-182521:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:180932-181044:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:180313-180450:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:179934-180011:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:179422-179541:-1:exon

LRCH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LRCH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and calponin homology domain-containing protein 2 isoform X4
translation: MLTYLNISRNLLSTLPKYLFDLPLKVLVVSNNKLVSIPEEIGKLRDLMELDISCNELQVLPQQIGKLQSLRELNIRRNNLHMLPDELGDLPLVKLDFSCNKITEIPICYRKLRHLQVIVLDNNPMQIPPAQICLKGKVHIFKFLSIQACLRIDKKPDSLDLPSLGKRIPSQPLTDSSIEDFYPNKNHGPDSGIGSDNGDKRLSTTEPSDDDTISLHSQVSESTREQTLRNDNHVMGNKLDPQKDQEVYDYIDPNAEEGAVPEQGDVQIGPLLSYIKERGKHPEKSQKIEHNEDWGDEKRLQKEQLLAEEDDEIKEVTDLRKIAAQLLQQEQKHRLLNHSASVSTRNRPKQPVESEKCVSTDEVNSPVSPYSWQPLENQKDSVDDQRWPETQPIIWQNEERRRSKQIRKEYFKYKSSRKSSSGNENDEQDSDNTNVSPQSPVSSEDYERTDSNTHGPFGLKPRSAFSRAARQDYGAMDPGFTMRRKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLDACKKLGVPQERLCLPHHILEERGLVKVGLTVQALLELPTLKVSQLSAM
SIO_010081: LRCH2
subclass of: SO_0000673
so part of: LRCH2
location: complement(join(179422..179541,179934..180011,180313..180450,180932..181044,182464..182521,183588..183638,184045..184089,186820..186936,187986..188034,188999..189067,193245..193349,193526..193593,193676..193773,194072..194183,194518..194608,194943..195076,195285..195421,195516..195621,197531..197657,200236..200258))
location: region:179422-200258:-1
so has part: feature:200236-200258:-1:exon
so has part: feature:197531-197657:-1:exon
so has part: feature:195516-195621:-1:exon
so has part: feature:195285-195421:-1:exon
so has part: feature:194943-195076:-1:exon
so has part: feature:194518-194608:-1:exon
so has part: feature:194072-194183:-1:exon
so has part: feature:193676-193773:-1:exon
so has part: feature:193526-193593:-1:exon
so has part: feature:193245-193349:-1:exon
so has part: feature:188999-189067:-1:exon
so has part: feature:187986-188034:-1:exon
so has part: feature:186820-186936:-1:exon
so has part: feature:184045-184089:-1:exon
so has part: feature:183588-183638:-1:exon
so has part: feature:182464-182521:-1:exon
so has part: feature:180932-181044:-1:exon
so has part: feature:180313-180450:-1:exon
so has part: feature:179934-180011:-1:exon
so has part: feature:179422-179541:-1:exon

XP_031410471.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200236-200258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197531-197657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195516-195621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195285-195421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194943-195076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194518-194608:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194072-194183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193676-193773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193526-193593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193245-193349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:188999-189067:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:187986-188034:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:186820-186936:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:184045-184089:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:183588-183638:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182464-182521:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:180932-181044:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:180313-180450:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:179934-180011:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:179422-179541:-1:exon

LRCH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LRCH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and calponin homology domain-containing protein 2 isoform X3
translation: MLTYLNISRNLLSTLPKYLFDLPLKVLVVSNNKLVSIPEEIGKLRDLMELDISCNELQVLPQQIGKLQSLRELNIRRNNLHMLPDELGDLPLVKLDFSCNKITEIPICYRKLRHLQVIVLDNNPMQIPPAQICLKGKVHIFKFLSIQACLRIDKKPDSLDLPSLGKRIPSQPLTDSSIEDFYPNKNHGPDSGIGSDNGDKRLSTTEPSDDDTISLHSQVSESTREQTLRNDNHVMGNKLDPQKDQEVYDYIDPNAEEGAVPEQGDVQIGPLLSYIKERGKHPEKSQKIEHNEDWGDEKRLQKEQLLAEEDDEIKEVTDLRKIAAQLLQQEQKHRRRPLSYRTSFSEKLFQRTRAAGRASRLLNHSASVSTRNRPKQPVESEKCVSTDEVNSPVSPYSWQPLENQKDSVDDQRWPETQPIIWQNEERRRSKQIRKEYFKYKSSRKSSSGNENDEDYERTDSNTHGPFGLKPRSAFSRAARQDYGAMDPGFTMRRKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLDACKKLGVPQERLCLPHHILEERGLVKVGLTVQALLELPTLKVSQLSAM
SIO_010081: LRCH2
subclass of: SO_0000673
so part of: LRCH2
location: complement(join(179422..179541,179934..180011,180313..180450,180932..181044,182464..182521,184045..184089,186820..186936,187986..188034,188999..189067,192207..192284,193245..193349,193526..193593,193676..193773,194072..194183,194518..194608,194943..195076,195285..195421,195516..195621,197531..197657,200236..200258))
location: region:179422-200258:-1
so has part: feature:200236-200258:-1:exon
so has part: feature:197531-197657:-1:exon
so has part: feature:195516-195621:-1:exon
so has part: feature:195285-195421:-1:exon
so has part: feature:194943-195076:-1:exon
so has part: feature:194518-194608:-1:exon
so has part: feature:194072-194183:-1:exon
so has part: feature:193676-193773:-1:exon
so has part: feature:193526-193593:-1:exon
so has part: feature:193245-193349:-1:exon
so has part: feature:192207-192284:-1:exon
so has part: feature:188999-189067:-1:exon
so has part: feature:187986-188034:-1:exon
so has part: feature:186820-186936:-1:exon
so has part: feature:184045-184089:-1:exon
so has part: feature:182464-182521:-1:exon
so has part: feature:180932-181044:-1:exon
so has part: feature:180313-180450:-1:exon
so has part: feature:179934-180011:-1:exon
so has part: feature:179422-179541:-1:exon

XP_031410470.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200236-200258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197531-197657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195516-195621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195285-195421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194943-195076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194518-194608:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194072-194183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193676-193773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193526-193593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193245-193349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192207-192284:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188999-189067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:187986-188034:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:186820-186936:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:184045-184089:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:182464-182521:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:180932-181044:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:180313-180450:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:179934-180011:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:179422-179541:-1:exon

LRCH2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LRCH2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat and calponin homology domain-containing protein 2 isoform X1
translation: MLTYLNISRNLLSTLPKYLFDLPLKVLVVSNNKLVSIPEEIGKLRDLMELDISCNELQVLPQQIGKLQSLRELNIRRNNLHMLPDELGDLPLVKLDFSCNKITEIPICYRKLRHLQVIVLDNNPMQIPPAQICLKGKVHIFKFLSIQACLRIDKKPDSLDLPSLGKRIPSQPLTDSSIEDFYPNKNHGPDSGIGSDNGDKRLSTTEPSDDDTISLHSQVSESTREQTLRNDNHVMGNKLDPQKDQEVYDYIDPNAEEGAVPEQGDVQIGPLLSYIKERGKHPEKSQKIEHNEDWGDEKRLQKEQLLAEEDDEIKEVTDLRKIAAQLLQQEQKHRRRPLSYRTSFSEKLFQRTRAAGRASRLLNHSASVSTRNRPKQPVESEKCVSTDEVNSPVSPYSWQPLENQKDSVDDQRWPETQPIIWQNEERRRSKQIRKEYFKYKSSRKSSSGNENDEQDSDNTNVSPQSPVSSEDYERTDSNTHGPFGLKPRSAFSRAARQDYGAMDPGFTMRRKMEHLREEREQIRQLRNNLESRLKVILPDDIGAALMDGVVLCHLANHIRPRSVASIHVPSPAVPKLSMAKCRRNVENFLDACKKLGVPQERLCLPHHILEERGLVKVGLTVQALLELPTLKVSQLSAM
SIO_010081: LRCH2
subclass of: SO_0000673
so part of: LRCH2
location: complement(join(179422..179541,179934..180011,180313..180450,180932..181044,182464..182521,183588..183638,184045..184089,186820..186936,187986..188034,188999..189067,192207..192284,193245..193349,193526..193593,193676..193773,194072..194183,194518..194608,194943..195076,195285..195421,195516..195621,197531..197657,200236..200258))
location: region:179422-200258:-1
so has part: feature:200236-200258:-1:exon
so has part: feature:197531-197657:-1:exon
so has part: feature:195516-195621:-1:exon
so has part: feature:195285-195421:-1:exon
so has part: feature:194943-195076:-1:exon
so has part: feature:194518-194608:-1:exon
so has part: feature:194072-194183:-1:exon
so has part: feature:193676-193773:-1:exon
so has part: feature:193526-193593:-1:exon
so has part: feature:193245-193349:-1:exon
so has part: feature:192207-192284:-1:exon
so has part: feature:188999-189067:-1:exon
so has part: feature:187986-188034:-1:exon
so has part: feature:186820-186936:-1:exon
so has part: feature:184045-184089:-1:exon
so has part: feature:183588-183638:-1:exon
so has part: feature:182464-182521:-1:exon
so has part: feature:180932-181044:-1:exon
so has part: feature:180313-180450:-1:exon
so has part: feature:179934-180011:-1:exon
so has part: feature:179422-179541:-1:exon

XP_031410468.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:200236-200258:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:197531-197657:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:195516-195621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:195285-195421:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:194943-195076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:194518-194608:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:194072-194183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:193676-193773:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:193526-193593:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:193245-193349:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:192207-192284:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:188999-189067:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:187986-188034:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:186820-186936:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:184045-184089:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:183588-183638:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:182464-182521:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:180932-181044:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:180313-180450:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:179934-180011:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:179422-179541:-1:exon

LOC100545119
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100545119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(218273..236312)
location: region:218273-236312:-1
so has part: feature:218273-236312:-1:exon
subclass of: SO_0000010

100545119
type: Gene
SIO_000068: ncbigene

position:218273:-1
position: 218273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236312:-1
position: 236312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:218273-236312:-1:exon

LOC100545119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545119
product: interleukin-13 receptor subunit alpha-2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010714968.3
SIO_010081: LOC100545119
subclass of: SO_0000673
so part of: LOC100545119
location: complement(join(218273..223215,226490..226592,226751..226895,227449..227606,228690..228874,229924..230044,230198..230351,231727..231878,234123..234286,235923..236312))
location: region:218273-236312:-1
so has part: feature:235923-236312:-1:exon
so has part: feature:234123-234286:-1:exon
so has part: feature:231727-231878:-1:exon
so has part: feature:230198-230351:-1:exon
so has part: feature:229924-230044:-1:exon
so has part: feature:228690-228874:-1:exon
so has part: feature:227449-227606:-1:exon
so has part: feature:226751-226895:-1:exon
so has part: feature:226490-226592:-1:exon
so has part: feature:218273-223215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235923-236312:-1:exon

position:235923:-1
position: 235923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:234123-234286:-1:exon

position:234123:-1
position: 234123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234286:-1
position: 234286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231727-231878:-1:exon

position:231727:-1
position: 231727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:231878:-1
position: 231878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:230198-230351:-1:exon

position:230198:-1
position: 230198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230351:-1
position: 230351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:229924-230044:-1:exon

position:229924:-1
position: 229924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230044:-1
position: 230044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:228690-228874:-1:exon

position:228690:-1
position: 228690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:228874:-1
position: 228874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:227449-227606:-1:exon

position:227449:-1
position: 227449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:227606:-1
position: 227606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:226751-226895:-1:exon

position:226751:-1
position: 226751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226895:-1
position: 226895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:226490-226592:-1:exon

position:226490:-1
position: 226490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:226592:-1
position: 226592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:218273-223215:-1:exon

position:223215:-1
position: 223215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100545119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545119
product: interleukin-13 receptor subunit alpha-2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010714967.3
SIO_010081: LOC100545119
subclass of: SO_0000673
so part of: LOC100545119
location: complement(join(218273..223215,226490..226592,226751..226895,227449..227606,228690..228874,229924..230044,230198..230351,231727..231878,234123..234411,235923..236312))
location: region:218273-236312:-1
so has part: feature:235923-236312:-1:exon
so has part: feature:234123-234411:-1:exon
so has part: feature:231727-231878:-1:exon
so has part: feature:230198-230351:-1:exon
so has part: feature:229924-230044:-1:exon
so has part: feature:228690-228874:-1:exon
so has part: feature:227449-227606:-1:exon
so has part: feature:226751-226895:-1:exon
so has part: feature:226490-226592:-1:exon
so has part: feature:218273-223215:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:235923-236312:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234123-234411:-1:exon

position:234411:-1
position: 234411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:231727-231878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230198-230351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229924-230044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228690-228874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227449-227606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226751-226895:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226490-226592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:218273-223215:-1:exon

LOC100545119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545119
product: interleukin-13 receptor subunit alpha-2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_019618061.2
SIO_010081: LOC100545119
subclass of: SO_0000673
so part of: LOC100545119
location: complement(join(218273..223215,226490..226592,226751..226895,227449..227606,228690..228874,229924..230044,230198..230351,231727..231878,234123..235878))
location: region:218273-235878:-1
so has part: feature:234123-235878:-1:exon
so has part: feature:231727-231878:-1:exon
so has part: feature:230198-230351:-1:exon
so has part: feature:229924-230044:-1:exon
so has part: feature:228690-228874:-1:exon
so has part: feature:227449-227606:-1:exon
so has part: feature:226751-226895:-1:exon
so has part: feature:226490-226592:-1:exon
so has part: feature:218273-223215:-1:exon

position:235878:-1
position: 235878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234123-235878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231727-231878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230198-230351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229924-230044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228690-228874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227449-227606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226751-226895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226490-226592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:218273-223215:-1:exon

LOC100545119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-13 receptor subunit alpha-2 isoform X1
translation: MLHQRAPPAPAMALQPISLLSLVLAWGCVASSSPWHTAVAPPLDLQITDPGLLGSLDIEWKPPPNVQTSNECTVKYKCEYRNTGDREWKVIFTRKLKLRVGFDLSRTAEVKVQTLLKGWCTNDVEVQSEWVYATFRVPLQGKLETEVQNFHCVYHDWEYLRCTWQPGLLAPRGVNYRLYYWYEGLEHAVQCDNYIQDHGINMGCMLQNLSQAEYKDLSICVNGSVAATSLRPLYATLRLHNLAKPSPPQQLVVSMSAAEELRVTWSPPGGQTPPQCLEYEVQLAEEQREAKAAWASMSTQMETVFTISRANQSRVSCVRVRGRTNSFCADEGFWSEWTQECFSVTRKEVKQLFILIPVILGLSSSLLIFTLIGQCKKSSSPAISISYISMSSSSLTSASLSSVQLSCCASSASREEWDVEFESSDCATESSWLPGSSSRLGRTRKRTIST
SIO_010081: LOC100545119
subclass of: SO_0000673
so part of: LOC100545119
location: complement(join(222996..223215,226490..226592,226751..226895,227449..227606,228690..228874,229924..230044,230198..230351,231727..231878,234123..234237))
location: region:222996-234237:-1
so has part: feature:234123-234237:-1:exon
so has part: feature:231727-231878:-1:exon
so has part: feature:230198-230351:-1:exon
so has part: feature:229924-230044:-1:exon
so has part: feature:228690-228874:-1:exon
so has part: feature:227449-227606:-1:exon
so has part: feature:226751-226895:-1:exon
so has part: feature:226490-226592:-1:exon
so has part: feature:222996-223215:-1:exon

XP_019473606.1
type: Protein
SIO_000068: ncbiprotein

position:222996:-1
position: 222996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234237:-1
position: 234237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234123-234237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231727-231878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230198-230351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229924-230044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228690-228874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227449-227606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226751-226895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226490-226592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:222996-223215:-1:exon

LOC100545119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-13 receptor subunit alpha-2 isoform X1
translation: MLHQRAPPAPAMALQPISLLSLVLAWGCVASSSPWHTAVAPPLDLQITDPGLLGSLDIEWKPPPNVQTSNECTVKYKCEYRNTGDREWKVIFTRKLKLRVGFDLSRTAEVKVQTLLKGWCTNDVEVQSEWVYATFRVPLQGKLETEVQNFHCVYHDWEYLRCTWQPGLLAPRGVNYRLYYWYEGLEHAVQCDNYIQDHGINMGCMLQNLSQAEYKDLSICVNGSVAATSLRPLYATLRLHNLAKPSPPQQLVVSMSAAEELRVTWSPPGGQTPPQCLEYEVQLAEEQREAKAAWASMSTQMETVFTISRANQSRVSCVRVRGRTNSFCADEGFWSEWTQECFSVTRKEVKQLFILIPVILGLSSSLLIFTLIGQCKKSSSPAISISYISMSSSSLTSASLSSVQLSCCASSASREEWDVEFESSDCATESSWLPGSSSRLGRTRKRTIST
SIO_010081: LOC100545119
subclass of: SO_0000673
so part of: LOC100545119
location: complement(join(222996..223215,226490..226592,226751..226895,227449..227606,228690..228874,229924..230044,230198..230351,231727..231878,234123..234237))
location: region:222996-234237:-1
so has part: feature:234123-234237:-1:exon
so has part: feature:231727-231878:-1:exon
so has part: feature:230198-230351:-1:exon
so has part: feature:229924-230044:-1:exon
so has part: feature:228690-228874:-1:exon
so has part: feature:227449-227606:-1:exon
so has part: feature:226751-226895:-1:exon
so has part: feature:226490-226592:-1:exon
so has part: feature:222996-223215:-1:exon

XP_010713269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234123-234237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231727-231878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230198-230351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229924-230044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228690-228874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227449-227606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226751-226895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226490-226592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:222996-223215:-1:exon

LOC100545119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-13 receptor subunit alpha-2 isoform X1
translation: MLHQRAPPAPAMALQPISLLSLVLAWGCVASSSPWHTAVAPPLDLQITDPGLLGSLDIEWKPPPNVQTSNECTVKYKCEYRNTGDREWKVIFTRKLKLRVGFDLSRTAEVKVQTLLKGWCTNDVEVQSEWVYATFRVPLQGKLETEVQNFHCVYHDWEYLRCTWQPGLLAPRGVNYRLYYWYEGLEHAVQCDNYIQDHGINMGCMLQNLSQAEYKDLSICVNGSVAATSLRPLYATLRLHNLAKPSPPQQLVVSMSAAEELRVTWSPPGGQTPPQCLEYEVQLAEEQREAKAAWASMSTQMETVFTISRANQSRVSCVRVRGRTNSFCADEGFWSEWTQECFSVTRKEVKQLFILIPVILGLSSSLLIFTLIGQCKKSSSPAISISYISMSSSSLTSASLSSVQLSCCASSASREEWDVEFESSDCATESSWLPGSSSRLGRTRKRTIST
SIO_010081: LOC100545119
subclass of: SO_0000673
so part of: LOC100545119
location: complement(join(222996..223215,226490..226592,226751..226895,227449..227606,228690..228874,229924..230044,230198..230351,231727..231878,234123..234237))
location: region:222996-234237:-1
so has part: feature:234123-234237:-1:exon
so has part: feature:231727-231878:-1:exon
so has part: feature:230198-230351:-1:exon
so has part: feature:229924-230044:-1:exon
so has part: feature:228690-228874:-1:exon
so has part: feature:227449-227606:-1:exon
so has part: feature:226751-226895:-1:exon
so has part: feature:226490-226592:-1:exon
so has part: feature:222996-223215:-1:exon

XP_010713270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:234123-234237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231727-231878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230198-230351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229924-230044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228690-228874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227449-227606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226751-226895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226490-226592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:222996-223215:-1:exon

LOC100545119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545119
product: interleukin-13 receptor subunit alpha-2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019618062.2
SIO_010081: LOC100545119
subclass of: SO_0000673
so part of: LOC100545119
location: complement(join(223126..223215,225054..225172,226490..226592,226751..226895,227449..227606,228690..228874,229924..230044,230198..230351,231727..231878,234123..234411,235923..236304))
location: region:223126-236304:-1
so has part: feature:235923-236304:-1:exon
so has part: feature:234123-234411:-1:exon
so has part: feature:231727-231878:-1:exon
so has part: feature:230198-230351:-1:exon
so has part: feature:229924-230044:-1:exon
so has part: feature:228690-228874:-1:exon
so has part: feature:227449-227606:-1:exon
so has part: feature:226751-226895:-1:exon
so has part: feature:226490-226592:-1:exon
so has part: feature:225054-225172:-1:exon
so has part: feature:223126-223215:-1:exon

position:223126:-1
position: 223126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236304:-1
position: 236304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235923-236304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234123-234411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231727-231878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230198-230351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229924-230044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228690-228874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227449-227606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226751-226895:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226490-226592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225054-225172:-1:exon

position:225054:-1
position: 225054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:225172:-1
position: 225172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:223126-223215:-1:exon

LOC100545119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-13 receptor subunit alpha-2 isoform X2
translation: MLHQRAPPAPAMALQPISLLSLVLAWGCVASSSPWHTAVAPPLDLQITDPGLLGSLDIEWKPPPNVQTSNECTVKYKCEYRNTGDREWKVIFTRKLKLRVGFDLSRTAEVKVQTLLKGWCTNDVEVQSEWVYATFRVPLQGKLETEVQNFHCVYHDWEYLRCTWQPGLLAPRGVNYRLYYWYEGLEHAVQCDNYIQDHGINMGCMLQNLSQAEYKDLSICVNGSVAATSLRPLYATLRLHNLAKPSPPQQLVVSMSAAEELRVTWSPPGGQTPPQCLEYEVQLAEEQREAKAAWASMSTQMETVFTISRANQSRVSCVRVRGRTNSFCADEGFWSEWTQECFSVTRKEVKQLFILIPVILGLSSSLLIFTLIGQCKKRSVYSRWEFLVNRGSSEGKSSLHQSAL
SIO_010081: LOC100545119
subclass of: SO_0000673
so part of: LOC100545119
location: complement(join(225091..225172,226490..226592,226751..226895,227449..227606,228690..228874,229924..230044,230198..230351,231727..231878,234123..234237))
location: region:225091-234237:-1
so has part: feature:234123-234237:-1:exon
so has part: feature:231727-231878:-1:exon
so has part: feature:230198-230351:-1:exon
so has part: feature:229924-230044:-1:exon
so has part: feature:228690-228874:-1:exon
so has part: feature:227449-227606:-1:exon
so has part: feature:226751-226895:-1:exon
so has part: feature:226490-226592:-1:exon
so has part: feature:225091-225172:-1:exon

XP_019473607.1
type: Protein
SIO_000068: ncbiprotein

position:225091:-1
position: 225091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234123-234237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231727-231878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230198-230351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229924-230044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228690-228874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227449-227606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226751-226895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226490-226592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:225091-225172:-1:exon

LOC100545119
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100545119
product: interleukin-13 receptor subunit alpha-2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_003208313.4
SIO_010081: LOC100545119
subclass of: SO_0000673
so part of: LOC100545119
location: complement(join(225786..226084,226490..226592,226751..226895,227449..227606,228690..228874,229924..230044,230198..230351,231727..231878,234123..234411,235923..236294))
location: region:225786-236294:-1
so has part: feature:235923-236294:-1:exon
so has part: feature:234123-234411:-1:exon
so has part: feature:231727-231878:-1:exon
so has part: feature:230198-230351:-1:exon
so has part: feature:229924-230044:-1:exon
so has part: feature:228690-228874:-1:exon
so has part: feature:227449-227606:-1:exon
so has part: feature:226751-226895:-1:exon
so has part: feature:226490-226592:-1:exon
so has part: feature:225786-226084:-1:exon

position:225786:-1
position: 225786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:236294:-1
position: 236294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:235923-236294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:234123-234411:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:231727-231878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:230198-230351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229924-230044:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228690-228874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227449-227606:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226751-226895:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226490-226592:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:225786-226084:-1:exon

position:226084:-1
position: 226084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100545119
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100545119
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-13 receptor subunit alpha-2 isoform X3
translation: MLHQRAPPAPAMALQPISLLSLVLAWGCVASSSPWHTAVAPPLDLQITDPGLLGSLDIEWKPPPNVQTSNECTVKYKCEYRNTGDREWKVIFTRKLKLRVGFDLSRTAEVKVQTLLKGWCTNDVEVQSEWVYATFRVPLQGKLETEVQNFHCVYHDWEYLRCTWQPGLLAPRGVNYRLYYWYEGLEHAVQCDNYIQDHGINMGCMLQNLSQAEYKDLSICVNGSVAATSLRPLYATLRLHNLAKPSPPQQLVVSMSAAEELRVTWSPPGGQTPPQCLEYEVQLAEEQREAKAAWASMSTQMETVFTISRANQSRVSCVRVRGRTNSFCADEGFWSEWTQECFSVTRKEVKQLFILIPVILGLSSSLLIFTLIGQCKKRSPAGKPLHTLVGC
SIO_010081: LOC100545119
subclass of: SO_0000673
so part of: LOC100545119
location: complement(join(226042..226084,226490..226592,226751..226895,227449..227606,228690..228874,229924..230044,230198..230351,231727..231878,234123..234237))
location: region:226042-234237:-1
so has part: feature:234123-234237:-1:exon
so has part: feature:231727-231878:-1:exon
so has part: feature:230198-230351:-1:exon
so has part: feature:229924-230044:-1:exon
so has part: feature:228690-228874:-1:exon
so has part: feature:227449-227606:-1:exon
so has part: feature:226751-226895:-1:exon
so has part: feature:226490-226592:-1:exon
so has part: feature:226042-226084:-1:exon

XP_003208361.2
type: Protein
SIO_000068: ncbiprotein

position:226042:-1
position: 226042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:234123-234237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:231727-231878:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230198-230351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:229924-230044:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:228690-228874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:227449-227606:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:226751-226895:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:226490-226592:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:226042-226084:-1:exon

HTR2C
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: HTR2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 260560..332219
location: region:260560-332219:1
so has part: feature:260560-332219:1:exon
subclass of: SO_0000010

100545433
type: Gene
SIO_000068: ncbigene

position:260560:1
position: 260560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332219:1
position: 332219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260560-332219:1:exon

HTR2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HTR2C
product: 5-hydroxytryptamine receptor 2C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031554613.1
SIO_010081: HTR2C
subclass of: SO_0000673
so part of: HTR2C
location: join(260560..260941,296901..297537,319013..319213,328614..332219)
location: region:260560-332219:1
so has part: feature:260560-260941:1:exon
so has part: feature:296901-297537:1:exon
so has part: feature:319013-319213:1:exon
so has part: feature:328614-332219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260560-260941:1:exon

position:260941:1
position: 260941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:296901-297537:1:exon

position:296901:1
position: 296901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297537:1
position: 297537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:319013-319213:1:exon

position:319013:1
position: 319013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:319213:1
position: 319213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:328614-332219:1:exon

position:328614:1
position: 328614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTR2C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: HTR2C
product: 5-hydroxytryptamine receptor 2C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031554614.1
SIO_010081: HTR2C
subclass of: SO_0000673
so part of: HTR2C
location: join(260560..260941,296901..297537,328614..332219)
location: region:260560-332219:1
so has part: feature:260560-260941:1:exon
so has part: feature:296901-297537:1:exon
so has part: feature:328614-332219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260560-260941:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:296901-297537:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328614-332219:1:exon

HTR2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HTR2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 2C isoform X1
translation: MMSTLSSTGILLSLTTVSVTLDFSLHGGLMAWSLSTNLTLNQSLPTSDPLNASEKGEVSRMSVREKNWPALLILVVILLTIGGNILVIMAVSLEKKLQNATNFFLMSLAVADMLVGILVMPVSLIAVLYDYAWPLPKQLCPIWISLDVLFSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAIMKIAAVWTISIGISMPIPVIGLQDDSRVFINGTCVLNDENFVLIGSFMAFFIPLIIMVITYCLTVQVLQRQATVFMCGEVPKQRRSSVNCLKKENNTEHISMLHNHEGASHLNSPVSKEAVLFRKGTMQSINNERRASKVLGIVFFLFLIMWCPFFITNVMSVLCKEACDKDLLSELLDVFVWVGYVCSGVNPLVYTLFNKTYRRAFSSYIRCQYKTSKKSALRQNQCLNVASTALYGKDLTLTSYRNGNELNSVELDEAEEGLEMQPGTSELSINSCNVVSERVSCV
SIO_010081: HTR2C
subclass of: SO_0000673
so part of: HTR2C
location: join(297150..297537,319013..319213,328614..329446)
location: region:297150-329446:1
so has part: feature:297150-297537:1:exon
so has part: feature:319013-319213:1:exon
so has part: feature:328614-329446:1:exon

XP_031410473.1
type: Protein
SIO_000068: ncbiprotein

position:297150:1
position: 297150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329446:1
position: 329446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:297150-297537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:319013-319213:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:328614-329446:1:exon

HTR2C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: HTR2C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 2C isoform X2
translation: MMSTLSSTGILLSLTTVSVTLDFSLHGGLMAWSLSTNLTLNQSLPTSDPLNASEKGEVSRMSVREKNWPALLILVVILLTIGGNILVIMAVSLEKKLQNATNFFLMSLAVADMLVGILVMPVSLIAVLYGISMPIPVIGLQDDSRVFINGTCVLNDENFVLIGSFMAFFIPLIIMVITYCLTVQVLQRQATVFMCGEVPKQRRSSVNCLKKENNTEHISMLHNHEGASHLNSPVSKEAVLFRKGTMQSINNERRASKVLGIVFFLFLIMWCPFFITNVMSVLCKEACDKDLLSELLDVFVWVGYVCSGVNPLVYTLFNKTYRRAFSSYIRCQYKTSKKSALRQNQCLNVASTALYGKDLTLTSYRNGNELNSVELDEAEEGLEMQPGTSELSINSCNVVSERVSCV
SIO_010081: HTR2C
subclass of: SO_0000673
so part of: HTR2C
location: join(297150..297537,328614..329446)
location: region:297150-329446:1
so has part: feature:297150-297537:1:exon
so has part: feature:328614-329446:1:exon

XP_031410474.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:297150-297537:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:328614-329446:1:exon

LOC109369005
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 424660..442015
location: region:424660-442015:1
so has part: feature:424660-442015:1:exon
subclass of: SO_0000011

109369005
type: Gene
SIO_000068: ncbigene

position:424660:1
position: 424660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:442015:1
position: 442015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424660-442015:1:exon

LOC109369005
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369005
product: uncharacterized LOC109369005, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002117558.1
SIO_010081: LOC109369005
subclass of: SO_0000673
so part of: LOC109369005
location: join(424660..424715,439449..439512,439773..442015)
location: region:424660-442015:1
so has part: feature:424660-424715:1:exon
so has part: feature:439449-439512:1:exon
so has part: feature:439773-442015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424660-424715:1:exon

position:424715:1
position: 424715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:439449-439512:1:exon

position:439449:1
position: 439449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:439512:1
position: 439512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:439773-442015:1:exon

position:439773:1
position: 439773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109369005
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369005
product: uncharacterized LOC109369005, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002117559.1
SIO_010081: LOC109369005
subclass of: SO_0000673
so part of: LOC109369005
location: join(424680..424715,435056..435127,436835..436875,439449..439512,439773..442015)
location: region:424680-442015:1
so has part: feature:424680-424715:1:exon
so has part: feature:435056-435127:1:exon
so has part: feature:436835-436875:1:exon
so has part: feature:439449-439512:1:exon
so has part: feature:439773-442015:1:exon

position:424680:1
position: 424680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:424680-424715:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435056-435127:1:exon

position:435056:1
position: 435056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435127:1
position: 435127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:436835-436875:1:exon

position:436835:1
position: 436835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436875:1
position: 436875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:439449-439512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:439773-442015:1:exon

LOC109369005
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369005
product: uncharacterized LOC109369005, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002117557.1
SIO_010081: LOC109369005
subclass of: SO_0000673
so part of: LOC109369005
location: join(424680..424715,435056..435127,439449..439512,439773..442015)
location: region:424680-442015:1
so has part: feature:424680-424715:1:exon
so has part: feature:435056-435127:1:exon
so has part: feature:439449-439512:1:exon
so has part: feature:439773-442015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424680-424715:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:435056-435127:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:439449-439512:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:439773-442015:1:exon

GDPD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GDPD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(498404..512512)
location: region:498404-512512:-1
so has part: feature:498404-512512:-1:exon
subclass of: SO_0000010

100544970
type: Gene
SIO_000068: ncbigene

position:498404:-1
position: 498404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512512:-1
position: 512512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:498404-512512:-1:exon

GDPD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GDPD2
product: glycerophosphodiester phosphodiesterase domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_019618066.2
SIO_010081: GDPD2
subclass of: SO_0000673
so part of: GDPD2
location: complement(join(498404..499190,499481..499509,499900..499982,500167..500314,500612..500763,501667..501882,502341..502491,503037..503119,503264..503409,503845..503938,504250..504348,504715..504774,504952..505045,505136..505239,506178..506321,512408..512512))
location: region:498404-512512:-1
so has part: feature:512408-512512:-1:exon
so has part: feature:506178-506321:-1:exon
so has part: feature:505136-505239:-1:exon
so has part: feature:504952-505045:-1:exon
so has part: feature:504715-504774:-1:exon
so has part: feature:504250-504348:-1:exon
so has part: feature:503845-503938:-1:exon
so has part: feature:503264-503409:-1:exon
so has part: feature:503037-503119:-1:exon
so has part: feature:502341-502491:-1:exon
so has part: feature:501667-501882:-1:exon
so has part: feature:500612-500763:-1:exon
so has part: feature:500167-500314:-1:exon
so has part: feature:499900-499982:-1:exon
so has part: feature:499481-499509:-1:exon
so has part: feature:498404-499190:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:512408-512512:-1:exon

position:512408:-1
position: 512408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506178-506321:-1:exon

position:506178:-1
position: 506178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506321:-1
position: 506321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505136-505239:-1:exon

position:505136:-1
position: 505136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505239:-1
position: 505239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:504952-505045:-1:exon

position:504952:-1
position: 504952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:505045:-1
position: 505045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:504715-504774:-1:exon

position:504715:-1
position: 504715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504774:-1
position: 504774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:504250-504348:-1:exon

position:504250:-1
position: 504250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:504348:-1
position: 504348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:503845-503938:-1:exon

position:503845:-1
position: 503845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503938:-1
position: 503938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:503264-503409:-1:exon

position:503264:-1
position: 503264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503409:-1
position: 503409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:503037-503119:-1:exon

position:503037:-1
position: 503037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503119:-1
position: 503119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:502341-502491:-1:exon

position:502341:-1
position: 502341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502491:-1
position: 502491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:501667-501882:-1:exon

position:501667:-1
position: 501667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501882:-1
position: 501882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:500612-500763:-1:exon

position:500612:-1
position: 500612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500763:-1
position: 500763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:500167-500314:-1:exon

position:500167:-1
position: 500167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:500314:-1
position: 500314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:499900-499982:-1:exon

position:499900:-1
position: 499900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499982:-1
position: 499982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:499481-499509:-1:exon

position:499481:-1
position: 499481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:499509:-1
position: 499509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:498404-499190:-1:exon

position:499190:-1
position: 499190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GDPD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GDPD2
product: glycerophosphodiester phosphodiesterase domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 72 samples with support for all annotated introns
transcript id: XM_010714972.3
SIO_010081: GDPD2
subclass of: SO_0000673
so part of: GDPD2
location: complement(join(498404..499190,499481..499509,499900..499982,500167..500314,500612..500763,501667..501882,502341..502491,503037..503119,503264..503409,503845..503938,504250..504348,504715..504774,504952..505045,505136..505239,506178..506321,508297..508426))
location: region:498404-508426:-1
so has part: feature:508297-508426:-1:exon
so has part: feature:506178-506321:-1:exon
so has part: feature:505136-505239:-1:exon
so has part: feature:504952-505045:-1:exon
so has part: feature:504715-504774:-1:exon
so has part: feature:504250-504348:-1:exon
so has part: feature:503845-503938:-1:exon
so has part: feature:503264-503409:-1:exon
so has part: feature:503037-503119:-1:exon
so has part: feature:502341-502491:-1:exon
so has part: feature:501667-501882:-1:exon
so has part: feature:500612-500763:-1:exon
so has part: feature:500167-500314:-1:exon
so has part: feature:499900-499982:-1:exon
so has part: feature:499481-499509:-1:exon
so has part: feature:498404-499190:-1:exon

position:508426:-1
position: 508426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:508297-508426:-1:exon

position:508297:-1
position: 508297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506178-506321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505136-505239:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504952-505045:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504715-504774:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:504250-504348:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503845-503938:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503264-503409:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:503037-503119:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:502341-502491:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:501667-501882:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:500612-500763:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:500167-500314:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:499900-499982:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:499481-499509:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:498404-499190:-1:exon

GDPD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GDPD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerophosphoinositol inositolphosphodiesterase GDPD2
translation: MADPPGCCRPCATCLLCLYSCQWITAKKEKRRGLKTTKCDCSWFFFLFCVFLFTLVWLYIAIIILNDFHNFNEFIFKQQKLWLDWSLVLLIATAVLITYSAVLLILALCLQLCGQPLKLHWLHKVLLIITALVVAAAFTGLGIKWAEEWRSARISLQATGPFLHIGIVGGMTLLAWPLASVIYRTHSTGLKVFLLLAYSAVMIALYLAPLGITSPCIMEENQLPPKPALVGHRGAPMLAPENTLMSLRKAVDCDVQVFETDVMVSADGVPFLMHDEKLTRTTNVQTVFPERATLNSTAFNWTDLQQLNAGSWFLERRPFPSVQSLSHGDRMQATRQKIPSLEQVLDAAKESNISIMFDLRPENHSDYQSFVNATLEVILQSGIPLQQVLWLPDGFREQVKQQVPGVQQIYGRKRLQDEKEPLLHVNLPYQDMSSEEIKQYRQDNISVNLYVVNQPWLFSVLWCSGVSSVTTNACQVLKEMKRPIWLLPSSTYLMIWIVVDCVSFLMILWAFLLMKKCSQRRRTAESETDVLLTKINSLMQD
SIO_010081: GDPD2
subclass of: SO_0000673
so part of: GDPD2
location: complement(join(499138..499190,499481..499509,499900..499982,500167..500314,500612..500763,501667..501882,502341..502491,503037..503119,503264..503409,503845..503938,504250..504348,504715..504774,504952..505045,505136..505239,506178..506291))
location: region:499138-506291:-1
so has part: feature:506178-506291:-1:exon
so has part: feature:505136-505239:-1:exon
so has part: feature:504952-505045:-1:exon
so has part: feature:504715-504774:-1:exon
so has part: feature:504250-504348:-1:exon
so has part: feature:503845-503938:-1:exon
so has part: feature:503264-503409:-1:exon
so has part: feature:503037-503119:-1:exon
so has part: feature:502341-502491:-1:exon
so has part: feature:501667-501882:-1:exon
so has part: feature:500612-500763:-1:exon
so has part: feature:500167-500314:-1:exon
so has part: feature:499900-499982:-1:exon
so has part: feature:499481-499509:-1:exon
so has part: feature:499138-499190:-1:exon

XP_019473611.1
type: Protein
SIO_000068: ncbiprotein

position:499138:-1
position: 499138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:506291:-1
position: 506291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:506178-506291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505136-505239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:504952-505045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504715-504774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504250-504348:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503845-503938:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503264-503409:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503037-503119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502341-502491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:501667-501882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500612-500763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:500167-500314:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:499900-499982:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:499481-499509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:499138-499190:-1:exon

GDPD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GDPD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerophosphoinositol inositolphosphodiesterase GDPD2
translation: MADPPGCCRPCATCLLCLYSCQWITAKKEKRRGLKTTKCDCSWFFFLFCVFLFTLVWLYIAIIILNDFHNFNEFIFKQQKLWLDWSLVLLIATAVLITYSAVLLILALCLQLCGQPLKLHWLHKVLLIITALVVAAAFTGLGIKWAEEWRSARISLQATGPFLHIGIVGGMTLLAWPLASVIYRTHSTGLKVFLLLAYSAVMIALYLAPLGITSPCIMEENQLPPKPALVGHRGAPMLAPENTLMSLRKAVDCDVQVFETDVMVSADGVPFLMHDEKLTRTTNVQTVFPERATLNSTAFNWTDLQQLNAGSWFLERRPFPSVQSLSHGDRMQATRQKIPSLEQVLDAAKESNISIMFDLRPENHSDYQSFVNATLEVILQSGIPLQQVLWLPDGFREQVKQQVPGVQQIYGRKRLQDEKEPLLHVNLPYQDMSSEEIKQYRQDNISVNLYVVNQPWLFSVLWCSGVSSVTTNACQVLKEMKRPIWLLPSSTYLMIWIVVDCVSFLMILWAFLLMKKCSQRRRTAESETDVLLTKINSLMQD
SIO_010081: GDPD2
subclass of: SO_0000673
so part of: GDPD2
location: complement(join(499138..499190,499481..499509,499900..499982,500167..500314,500612..500763,501667..501882,502341..502491,503037..503119,503264..503409,503845..503938,504250..504348,504715..504774,504952..505045,505136..505239,506178..506291))
location: region:499138-506291:-1
so has part: feature:506178-506291:-1:exon
so has part: feature:505136-505239:-1:exon
so has part: feature:504952-505045:-1:exon
so has part: feature:504715-504774:-1:exon
so has part: feature:504250-504348:-1:exon
so has part: feature:503845-503938:-1:exon
so has part: feature:503264-503409:-1:exon
so has part: feature:503037-503119:-1:exon
so has part: feature:502341-502491:-1:exon
so has part: feature:501667-501882:-1:exon
so has part: feature:500612-500763:-1:exon
so has part: feature:500167-500314:-1:exon
so has part: feature:499900-499982:-1:exon
so has part: feature:499481-499509:-1:exon
so has part: feature:499138-499190:-1:exon

XP_010713274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:506178-506291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:505136-505239:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:504952-505045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:504715-504774:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:504250-504348:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503845-503938:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503264-503409:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:503037-503119:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502341-502491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:501667-501882:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:500612-500763:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:500167-500314:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:499900-499982:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:499481-499509:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:499138-499190:-1:exon

LOC104912101
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(529732..542259)
location: region:529732-542259:-1
so has part: feature:529732-542259:-1:exon
subclass of: SO_0000010

104912101
type: Gene
SIO_000068: ncbigene

position:529732:-1
position: 529732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542259:-1
position: 542259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529732-542259:-1:exon

LOC104912101
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9103
gene: LOC104912101
product: uncharacterized LOC104912101, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002117560.2
SIO_010081: LOC104912101
so part of: LOC104912101
location: complement(join(529732..530382,531713..531907,536898..537041,537876..537994,540608..540739,541640..542259))
location: region:529732-542259:-1
so has part: feature:541640-542259:-1:exon
so has part: feature:540608-540739:-1:exon
so has part: feature:537876-537994:-1:exon
so has part: feature:536898-537041:-1:exon
so has part: feature:531713-531907:-1:exon
so has part: feature:529732-530382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541640-542259:-1:exon

position:541640:-1
position: 541640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:540608-540739:-1:exon

position:540608:-1
position: 540608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540739:-1
position: 540739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:537876-537994:-1:exon

position:537876:-1
position: 537876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537994:-1
position: 537994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:536898-537041:-1:exon

position:536898:-1
position: 536898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537041:-1
position: 537041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:531713-531907:-1:exon

position:531713:-1
position: 531713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531907:-1
position: 531907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:529732-530382:-1:exon

position:530382:-1
position: 530382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912101
product: uncharacterized LOC104912101, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_010714974.3
SIO_010081: LOC104912101
subclass of: SO_0000673
so part of: LOC104912101
location: complement(join(529736..530382,536898..537041,537876..537994,540608..540739,541640..541924))
location: region:529736-541924:-1
so has part: feature:541640-541924:-1:exon
so has part: feature:540608-540739:-1:exon
so has part: feature:537876-537994:-1:exon
so has part: feature:536898-537041:-1:exon
so has part: feature:529736-530382:-1:exon

position:529736:-1
position: 529736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541924:-1
position: 541924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541640-541924:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540608-540739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537876-537994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536898-537041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529736-530382:-1:exon

LOC104912101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104912101 isoform X3
translation: MLPLAPFSSAPGMSQCGLVTQAGPQQDTERAVEILTRYQSTLCSPEEQELKASIGKISHIFQSELFQALLDIHEFYDFTLRSAPLQPPSPAVHRGTAQHLSPREPHGPPEPPAQDGERRLLAVTPGTPPRLVRVTARRTEAPTSVCSLVLGSRSALPQDFV
SIO_010081: LOC104912101
subclass of: SO_0000673
so part of: LOC104912101
location: complement(join(530371..530382,536898..537041,537876..537994,540608..540739,541640..541718))
location: region:530371-541718:-1
so has part: feature:541640-541718:-1:exon
so has part: feature:540608-540739:-1:exon
so has part: feature:537876-537994:-1:exon
so has part: feature:536898-537041:-1:exon
so has part: feature:530371-530382:-1:exon

XP_010713276.1
type: Protein
SIO_000068: ncbiprotein

position:530371:-1
position: 530371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541718:-1
position: 541718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541640-541718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540608-540739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537876-537994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536898-537041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:530371-530382:-1:exon

LOC104912101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912101
product: uncharacterized LOC104912101, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010714973.3
SIO_010081: LOC104912101
subclass of: SO_0000673
so part of: LOC104912101
location: complement(join(536168..536700,536898..537041,537876..537994,540608..540739,541640..541938))
location: region:536168-541938:-1
so has part: feature:541640-541938:-1:exon
so has part: feature:540608-540739:-1:exon
so has part: feature:537876-537994:-1:exon
so has part: feature:536898-537041:-1:exon
so has part: feature:536168-536700:-1:exon

position:536168:-1
position: 536168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541938:-1
position: 541938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541640-541938:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540608-540739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537876-537994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536898-537041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536168-536700:-1:exon

position:536700:-1
position: 536700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912101
product: uncharacterized LOC104912101, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_031554615.1
SIO_010081: LOC104912101
subclass of: SO_0000673
so part of: LOC104912101
location: complement(join(536168..537041,537876..537994,540608..540739,541640..541937))
location: region:536168-541937:-1
so has part: feature:541640-541937:-1:exon
so has part: feature:540608-540739:-1:exon
so has part: feature:537876-537994:-1:exon
so has part: feature:536168-537041:-1:exon

position:541937:-1
position: 541937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541640-541937:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540608-540739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537876-537994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536168-537041:-1:exon

LOC104912101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104912101 isoform X1
translation: MLPLAPFSSAPGMSQCGLVTQAGPQQDTERAVEILTRYQSTLCSPEEQELKASIGKISHIFQSELFQALLDIHEFYDFTLRSAPLQPPSPAVHRGTAQHLSPREPHGPPEPPAQDGERRLLAVTPGTPPRLVRVTARRTEAPTSVCSLVLGSRSALPQRSCGPVSAVGRQMDVAQDGNPPSPVPRYLHLTPTSHISTFFSKLLNGRSIPQHTRSFSLLFAIYLDVGRKSQLPPGVSASRGLHT
SIO_010081: LOC104912101
subclass of: SO_0000673
so part of: LOC104912101
location: complement(join(536443..536700,536898..537041,537876..537994,540608..540739,541640..541718))
location: region:536443-541718:-1
so has part: feature:541640-541718:-1:exon
so has part: feature:540608-540739:-1:exon
so has part: feature:537876-537994:-1:exon
so has part: feature:536898-537041:-1:exon
so has part: feature:536443-536700:-1:exon

XP_010713275.1
type: Protein
SIO_000068: ncbiprotein

position:536443:-1
position: 536443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541640-541718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540608-540739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537876-537994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536898-537041:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536443-536700:-1:exon

LOC104912101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC104912101 isoform X2
translation: MLPLAPFSSAPGMSQCGLVTQAGPQQDTERAVEILTRYQSTLCSPEEQELKASIGKISHIFQSELFQALLDIHEFYDFTLRSAPLQPPSPAVHRGTAQHLSPREPHGPPEPPAQDGERRLLAVTPGTPPRLVRVTARRTEAPTSVCSLVLGSRSALPQVSPRTASHRATGCHRGDSTGAVCP
SIO_010081: LOC104912101
subclass of: SO_0000673
so part of: LOC104912101
location: complement(join(536823..537041,537876..537994,540608..540739,541640..541718))
location: region:536823-541718:-1
so has part: feature:541640-541718:-1:exon
so has part: feature:540608-540739:-1:exon
so has part: feature:537876-537994:-1:exon
so has part: feature:536823-537041:-1:exon

XP_031410475.1
type: Protein
SIO_000068: ncbiprotein

position:536823:-1
position: 536823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541640-541718:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:540608-540739:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:537876-537994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536823-537041:-1:exon

LOC104912102
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(542559..559073)
location: region:542559-559073:-1
so has part: feature:542559-559073:-1:exon
subclass of: SO_0000011

104912102
type: Gene
SIO_000068: ncbigene

position:542559:-1
position: 542559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559073:-1
position: 559073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:542559-559073:-1:exon

LOC104912102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC104912102
product: uncharacterized LOC104912102
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_794406.1
SIO_010081: LOC104912102
subclass of: SO_0000673
so part of: LOC104912102
location: complement(join(542559..542610,547497..547550,558981..559073))
location: region:542559-559073:-1
so has part: feature:558981-559073:-1:exon
so has part: feature:547497-547550:-1:exon
so has part: feature:542559-542610:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:558981-559073:-1:exon

position:558981:-1
position: 558981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:547497-547550:-1:exon

position:547497:-1
position: 547497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547550:-1
position: 547550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:542559-542610:-1:exon

position:542610:-1
position: 542610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912137
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(559547..564737)
location: region:559547-564737:-1
so has part: feature:559547-564737:-1:exon
subclass of: SO_0000010

104912137
type: Gene
SIO_000068: ncbigene

position:559547:-1
position: 559547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564737:-1
position: 564737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:559547-564737:-1:exon

LOC104912137
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912137
product: disks large homolog 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019618030.1
SIO_010081: LOC104912137
subclass of: SO_0000673
so part of: LOC104912137
location: complement(join(559547..559696,559824..559980,562297..562456,562598..562742,562847..562983,563197..563366,563761..564067,564695..564737))
location: region:559547-564737:-1
so has part: feature:564695-564737:-1:exon
so has part: feature:563761-564067:-1:exon
so has part: feature:563197-563366:-1:exon
so has part: feature:562847-562983:-1:exon
so has part: feature:562598-562742:-1:exon
so has part: feature:562297-562456:-1:exon
so has part: feature:559824-559980:-1:exon
so has part: feature:559547-559696:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:564695-564737:-1:exon

position:564695:-1
position: 564695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:563761-564067:-1:exon

position:563761:-1
position: 563761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564067:-1
position: 564067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:563197-563366:-1:exon

position:563197:-1
position: 563197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:563366:-1
position: 563366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:562847-562983:-1:exon

position:562847:-1
position: 562847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562983:-1
position: 562983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:562598-562742:-1:exon

position:562598:-1
position: 562598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562742:-1
position: 562742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:562297-562456:-1:exon

position:562297:-1
position: 562297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:562456:-1
position: 562456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:559824-559980:-1:exon

position:559824:-1
position: 559824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559980:-1
position: 559980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:559547-559696:-1:exon

position:559696:-1
position: 559696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912137
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912137
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 3-like
translation: MGPCRDLQGSPPSLGRSWRLPRSCSICRVLRTESQADEHPSSSATHPLPARSSPAQELTGFWGQRGTDAPCASPQGNSGLGFSIAGGIDNPHIPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNDVDVSEVVHSKAVEALKEAGPVVRLVVRRRQPPPETIMEVNLMKGPKGLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVAALKNTSDMVYLKVAKPGSLHLNDMYAPPDYTSTFSTLADNHISHNSSLGYLGGVESKPAYPAPPQVTPSRYSPIPRHMIGDEDFTREPRKIILHKGSTGLGFNIVGGEDGEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKRAGQTVTIIAQYRPEGTEGGSLICK
SIO_010081: LOC104912137
subclass of: SO_0000673
so part of: LOC104912137
location: complement(join(559562..559696,559824..559980,562297..562456,562598..562742,562847..562983,563197..563366,563761..564067,564695..564737))
location: region:559562-564737:-1
so has part: feature:564695-564737:-1:exon
so has part: feature:563761-564067:-1:exon
so has part: feature:563197-563366:-1:exon
so has part: feature:562847-562983:-1:exon
so has part: feature:562598-562742:-1:exon
so has part: feature:562297-562456:-1:exon
so has part: feature:559824-559980:-1:exon
so has part: feature:559562-559696:-1:exon

XP_019473575.1
type: Protein
SIO_000068: ncbiprotein

position:559562:-1
position: 559562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:564695-564737:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:563761-564067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:563197-563366:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:562847-562983:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:562598-562742:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:562297-562456:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:559824-559980:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:559562-559696:-1:exon

LOC109369007
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369007
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 565670..571010
location: region:565670-571010:1
so has part: feature:565670-571010:1:exon
subclass of: SO_0000011

109369007
type: Gene
SIO_000068: ncbigene

position:565670:1
position: 565670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:571010:1
position: 571010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:565670-571010:1:exon

LOC109369007
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369007
product: uncharacterized LOC109369007
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_002117561.2
SIO_010081: LOC109369007
subclass of: SO_0000673
so part of: LOC109369007
location: join(565670..565871,566928..571010)
location: region:565670-571010:1
so has part: feature:565670-565871:1:exon
so has part: feature:566928-571010:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:565670-565871:1:exon

position:565871:1
position: 565871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:566928-571010:1:exon

position:566928:1
position: 566928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100544818
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(571892..586731)
location: region:571892-586731:-1
so has part: feature:571892-586731:-1:exon
subclass of: SO_0000010

100544818
type: Gene
SIO_000068: ncbigene

position:571892:-1
position: 571892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586731:-1
position: 586731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571892-586731:-1:exon

LOC100544818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544818
product: disks large homolog 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010714976.3
SIO_010081: LOC100544818
subclass of: SO_0000673
so part of: LOC100544818
location: complement(join(571892..573203,574848..574939,575681..575790,576280..576452,576533..576634,577306..577356,577747..577788,578582..578627,581727..581802,581980..582156,586086..586200,586605..586731))
location: region:571892-586731:-1
so has part: feature:586605-586731:-1:exon
so has part: feature:586086-586200:-1:exon
so has part: feature:581980-582156:-1:exon
so has part: feature:581727-581802:-1:exon
so has part: feature:578582-578627:-1:exon
so has part: feature:577747-577788:-1:exon
so has part: feature:577306-577356:-1:exon
so has part: feature:576533-576634:-1:exon
so has part: feature:576280-576452:-1:exon
so has part: feature:575681-575790:-1:exon
so has part: feature:574848-574939:-1:exon
so has part: feature:571892-573203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586605-586731:-1:exon

position:586605:-1
position: 586605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586086-586200:-1:exon

position:586086:-1
position: 586086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586200:-1
position: 586200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:581980-582156:-1:exon

position:581980:-1
position: 581980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582156:-1
position: 582156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:581727-581802:-1:exon

position:581727:-1
position: 581727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581802:-1
position: 581802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:578582-578627:-1:exon

position:578582:-1
position: 578582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:578627:-1
position: 578627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:577747-577788:-1:exon

position:577747:-1
position: 577747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577788:-1
position: 577788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:577306-577356:-1:exon

position:577306:-1
position: 577306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577356:-1
position: 577356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:576533-576634:-1:exon

position:576533:-1
position: 576533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576634:-1
position: 576634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:576280-576452:-1:exon

position:576280:-1
position: 576280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576452:-1
position: 576452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:575681-575790:-1:exon

position:575681:-1
position: 575681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:575790:-1
position: 575790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:574848-574939:-1:exon

position:574848:-1
position: 574848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574939:-1
position: 574939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:571892-573203:-1:exon

position:573203:-1
position: 573203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100544818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544818
product: disks large homolog 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 126 samples with support for all annotated introns
transcript id: XM_010714975.3
SIO_010081: LOC100544818
subclass of: SO_0000673
so part of: LOC100544818
location: complement(join(571892..573203,574848..574939,575681..575790,576280..576452,576533..576634,577306..577356,577747..577788,581034..581133,581727..581802,581980..582156,586086..586200,586605..586731))
location: region:571892-586731:-1
so has part: feature:586605-586731:-1:exon
so has part: feature:586086-586200:-1:exon
so has part: feature:581980-582156:-1:exon
so has part: feature:581727-581802:-1:exon
so has part: feature:581034-581133:-1:exon
so has part: feature:577747-577788:-1:exon
so has part: feature:577306-577356:-1:exon
so has part: feature:576533-576634:-1:exon
so has part: feature:576280-576452:-1:exon
so has part: feature:575681-575790:-1:exon
so has part: feature:574848-574939:-1:exon
so has part: feature:571892-573203:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586605-586731:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:586086-586200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581980-582156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581727-581802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:581034-581133:-1:exon

position:581034:-1
position: 581034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581133:-1
position: 581133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:577747-577788:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577306-577356:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576533-576634:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576280-576452:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:575681-575790:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574848-574939:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:571892-573203:-1:exon

LOC100544818
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544818
product: disks large homolog 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_010714977.3
SIO_010081: LOC100544818
subclass of: SO_0000673
so part of: LOC100544818
location: complement(join(571892..573203,574848..574939,575681..575790,576280..576452,576533..576634,577306..577356,577747..577788,581034..581133,581727..581802,581980..582156,586086..586200,586595..586667))
location: region:571892-586667:-1
so has part: feature:586595-586667:-1:exon
so has part: feature:586086-586200:-1:exon
so has part: feature:581980-582156:-1:exon
so has part: feature:581727-581802:-1:exon
so has part: feature:581034-581133:-1:exon
so has part: feature:577747-577788:-1:exon
so has part: feature:577306-577356:-1:exon
so has part: feature:576533-576634:-1:exon
so has part: feature:576280-576452:-1:exon
so has part: feature:575681-575790:-1:exon
so has part: feature:574848-574939:-1:exon
so has part: feature:571892-573203:-1:exon

position:586667:-1
position: 586667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586595-586667:-1:exon

position:586595:-1
position: 586595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:586086-586200:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581980-582156:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581727-581802:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:581034-581133:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577747-577788:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:577306-577356:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576533-576634:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:576280-576452:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:575681-575790:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:574848-574939:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:571892-573203:-1:exon

LOC100544818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 3 isoform X2
translation: MMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRDFPGLSDDYYGAKNLKGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPTKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKVFDKAMKLEQEFGEYFTAIVQGDSLEEIYSKIKQIIEDQSGHYIWVPSPEKL
SIO_010081: LOC100544818
subclass of: SO_0000673
so part of: LOC100544818
location: complement(join(573097..573203,574848..574939,575681..575790,576280..576452,576533..576634,577306..577356,577747..577788,578582..578627,581727..581802,581980..582156,586086..586156))
location: region:573097-586156:-1
so has part: feature:586086-586156:-1:exon
so has part: feature:581980-582156:-1:exon
so has part: feature:581727-581802:-1:exon
so has part: feature:578582-578627:-1:exon
so has part: feature:577747-577788:-1:exon
so has part: feature:577306-577356:-1:exon
so has part: feature:576533-576634:-1:exon
so has part: feature:576280-576452:-1:exon
so has part: feature:575681-575790:-1:exon
so has part: feature:574848-574939:-1:exon
so has part: feature:573097-573203:-1:exon

XP_010713278.1
type: Protein
SIO_000068: ncbiprotein

position:573097:-1
position: 573097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586156:-1
position: 586156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586086-586156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581980-582156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581727-581802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578582-578627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577747-577788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577306-577356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576533-576634:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576280-576452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575681-575790:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574848-574939:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:573097-573203:-1:exon

LOC100544818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 3 isoform X1
translation: MMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENLAQESSGQEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPTKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKVFDKAMKLEQEFGEYFTAIVQGDSLEEIYSKIKQIIEDQSGHYIWVPSPEKL
SIO_010081: LOC100544818
subclass of: SO_0000673
so part of: LOC100544818
location: complement(join(573097..573203,574848..574939,575681..575790,576280..576452,576533..576634,577306..577356,577747..577788,581034..581133,581727..581802,581980..582156,586086..586156))
location: region:573097-586156:-1
so has part: feature:586086-586156:-1:exon
so has part: feature:581980-582156:-1:exon
so has part: feature:581727-581802:-1:exon
so has part: feature:581034-581133:-1:exon
so has part: feature:577747-577788:-1:exon
so has part: feature:577306-577356:-1:exon
so has part: feature:576533-576634:-1:exon
so has part: feature:576280-576452:-1:exon
so has part: feature:575681-575790:-1:exon
so has part: feature:574848-574939:-1:exon
so has part: feature:573097-573203:-1:exon

XP_010713277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586086-586156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581980-582156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581727-581802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581034-581133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577747-577788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577306-577356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576533-576634:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576280-576452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575681-575790:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574848-574939:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:573097-573203:-1:exon

LOC100544818
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544818
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large homolog 3 isoform X1
translation: MMNSSMSSGSGSLRTSEKRSLYVRALFDYDRTRDSCLPSQGLSFSYGDILHVINASDDEWWQARLVTPHGESEQIGVIPSKKRVEKKERARLKTVKFHARTGMIESNRSIKTKRKKSFRLSRKFPFYKSKENLAQESSGQEQGVTSNTSDSESSSKGQEDAILSYEPVTRQEIHYARPVIILGPTKDRVNDDLISEFPHKFGSCVPHTTRPRRDNEVDGQDYHFVVSREQMEKDIQDNKFIEAGQFNDNLYGTSIQSVRAVAERGKHCILDVSGNAIKRLQQAQLYPIAIFIKPKSIEALMEMNRRQTYEQANKVFDKAMKLEQEFGEYFTAIVQGDSLEEIYSKIKQIIEDQSGHYIWVPSPEKL
SIO_010081: LOC100544818
subclass of: SO_0000673
so part of: LOC100544818
location: complement(join(573097..573203,574848..574939,575681..575790,576280..576452,576533..576634,577306..577356,577747..577788,581034..581133,581727..581802,581980..582156,586086..586156))
location: region:573097-586156:-1
so has part: feature:586086-586156:-1:exon
so has part: feature:581980-582156:-1:exon
so has part: feature:581727-581802:-1:exon
so has part: feature:581034-581133:-1:exon
so has part: feature:577747-577788:-1:exon
so has part: feature:577306-577356:-1:exon
so has part: feature:576533-576634:-1:exon
so has part: feature:576280-576452:-1:exon
so has part: feature:575681-575790:-1:exon
so has part: feature:574848-574939:-1:exon
so has part: feature:573097-573203:-1:exon

XP_010713279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586086-586156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:581980-582156:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581727-581802:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581034-581133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:577747-577788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:577306-577356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:576533-576634:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:576280-576452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:575681-575790:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:574848-574939:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:573097-573203:-1:exon

TEX11
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TEX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 590157..615762
location: region:590157-615762:1
so has part: feature:590157-615762:1:exon
subclass of: SO_0000010

100544660
type: Gene
SIO_000068: ncbigene

position:590157:1
position: 590157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615762:1
position: 615762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590157-615762:1:exon

TEX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TEX11
product: testis expressed 11, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019618069.2
SIO_010081: TEX11
subclass of: SO_0000673
so part of: TEX11
location: join(590157..590505,590601..590713,592373..592457,593681..593760,594190..594270,594353..594472,595929..596009,597670..597755,599176..599233,599925..600020,601089..601170,601591..601669,602373..602524,603224..603309,603816..603953,606690..606775,607393..607440,608141..608181,609344..609430,610288..610358,610827..610943,611741..611813,613237..613386,614313..614421,615366..615762)
location: region:590157-615762:1
so has part: feature:590157-590505:1:exon
so has part: feature:590601-590713:1:exon
so has part: feature:592373-592457:1:exon
so has part: feature:593681-593760:1:exon
so has part: feature:594190-594270:1:exon
so has part: feature:594353-594472:1:exon
so has part: feature:595929-596009:1:exon
so has part: feature:597670-597755:1:exon
so has part: feature:599176-599233:1:exon
so has part: feature:599925-600020:1:exon
so has part: feature:601089-601170:1:exon
so has part: feature:601591-601669:1:exon
so has part: feature:602373-602524:1:exon
so has part: feature:603224-603309:1:exon
so has part: feature:603816-603953:1:exon
so has part: feature:606690-606775:1:exon
so has part: feature:607393-607440:1:exon
so has part: feature:608141-608181:1:exon
so has part: feature:609344-609430:1:exon
so has part: feature:610288-610358:1:exon
so has part: feature:610827-610943:1:exon
so has part: feature:611741-611813:1:exon
so has part: feature:613237-613386:1:exon
so has part: feature:614313-614421:1:exon
so has part: feature:615366-615762:1:exon

urn:…
SIO_000300: 1
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urn:…
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
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TEX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TEX11
product: testis expressed 11, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_010714978.3
SIO_010081: TEX11
subclass of: SO_0000673
so part of: TEX11
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location: region:590157-615761:1
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position:615761:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
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SIO_000628: feature:603816-603953:1:exon

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SIO_000300: 16
SIO_000628: feature:604609-604711:1:exon

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position:604711:1
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SIO_000300: 17
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SIO_000628: feature:609344-609430:1:exon

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SIO_000300: 24
SIO_000628: feature:611741-611813:1:exon

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SIO_000300: 25
SIO_000628: feature:613237-613386:1:exon

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SIO_000300: 26
SIO_000628: feature:614313-614421:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:615366-615761:1:exon

TEX11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TEX11
product: testis expressed 11, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019618068.2
SIO_010081: TEX11
subclass of: SO_0000673
so part of: TEX11
location: join(590157..590505,590601..590713,592373..592457,593681..593760,594190..594270,594353..594472,595929..596009,597670..597755,599176..599233,599925..600020,601089..601170,601591..601669,602373..602524,603224..603309,603816..603953,604609..604711,605828..605952,606690..606775,607393..607440,608141..608181,609344..609430,610288..610358,610827..610943,611741..611813,613237..613386,614159..614290)
location: region:590157-614290:1
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position:614290:1
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reference: sequence
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SIO_000300: 24
SIO_000628: feature:611741-611813:1:exon

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SIO_000628: feature:613237-613386:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:614159-614290:1:exon

position:614159:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TEX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TEX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 11 isoform X1
translation: MVGGQLGAAGELLRELLVEEAPPRIAALIEELFRAAGALGEADGSAAEIEEDAINLWNWAVTKHTGSVISDEQRAKLRFVACRLVYLCEGSNPPEGTIRRQILMSMKTGKGWIDVGKADLADEFLEIAMNSIEKLYAKLRKEGDGEADIPVCKADVEKDLFKVLSYQAESAVAQGDFQKATQCVQRCKDMLVRLPRETRYLAILCYNFGVETYDCKKYEQSSFWLSQSYDIGKMDMKNSIGKEMQAKVLRLLATAYFEWDCSLYLDKALKAINLANEENLHPAGFFLKVKILLKSGASDEDISSAVAEFQRHEMSLDFCLNTAKLLLEHGRESVGFDFLKSVAERFEASPDFGKVTLLYIEFLLQNKRELLAKQKVEEIIIGHYTGKQLLPETLNRLHIILWDTAAKHYEAKSYSEALNWYNYSVSFYTPGQIDQNLAKLQRNMASCYLHLKQIDKAKEAVKEAERCDPNSIFTQFSVYKIAVMENDTDKAVEAIIEMGKLAEKPSQHEDKLIVDESMSTNLLSLAAQIALENDQQVVAIRALEHLSEHSQDCQQIFAALKCLIRLTLSKVEKEEKRDKDIKSMLTYLTLAHQRLAEPFTEENLTRDVRTSEAHWFRRVAWNLAVQLKDCPEQMRDFFVLSFKLSQFCPSDKAVLIAQKTCLLMAAAIDLELGRQEVTLSEQVEFWNQALQHLQACREIWKVLKLTGDFSKDPTDTLLLLYEFEARSKLNDPTLNNFMESIWEQPHVEIKTLEIIASLAMEPPARYPVLCKKALKSALNLYRKQSTTDAVKFSNCLHSLINLSLPTGVTDLDACVLQEVWGYFEDALSVVSSTVS
SIO_010081: TEX11
subclass of: SO_0000673
so part of: TEX11
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location: region:590475-615495:1
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XP_010713280.1
type: Protein
SIO_000068: ncbiprotein

position:590475:1
position: 590475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:615495:1
position: 615495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590475-590505:1:exon

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SIO_000300: 2
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SIO_000300: 3
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SIO_000628: feature:593681-593760:1:exon

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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 12
SIO_000628: feature:601591-601669:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602373-602524:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:603224-603309:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:603816-603953:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:604609-604711:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:605828-605952:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:606690-606775:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:607393-607440:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:608141-608181:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:609344-609430:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:610288-610358:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:610827-610943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611741-611813:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:613237-613386:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:614313-614421:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:615366-615495:1:exon

TEX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TEX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 11 isoform X3
translation: MVGGQLGAAGELLRELLVEEAPPRIAALIEELFRAAGALGEADGSAAEIEEDAINLWNWAVTKHTGSVISDEQRAKLRFVACRLVYLCEGSNPPEGTIRRQILMSMKTGKGWIDVGKADLADEFLEIAMNSIEKLYAKLRKEGDGEADIPVCKADVEKDLFKVLSYQAESAVAQGDFQKATQCVQRCKDMLVRLPRETRYLAILCYNFGVETYDCKKYEQSSFWLSQSYDIGKMDMKNSIGKEMQAKVLRLLATAYFEWDCSLYLDKALKAINLANEENLHPAGFFLKVKILLKSGASDEDISSAVAEFQRHEMSLDFCLNTAKLLLEHGRESVGFDFLKSVAERFEASPDFGKVTLLYIEFLLQNKRELLAKQKVEEIIIGHYTGKQLLPETLNRLHIILWDTAAKHYEAKSYSEALNWYNYSVSFYTPGQIDQNLAKLQRNMASCYLHLKQIDKNDQQVVAIRALEHLSEHSQDCQQIFAALKCLIRLTLSKVEKEEKRDKDIKSMLTYLTLAHQRLAEPFTEENLTRDVRTSEAHWFRRVAWNLAVQLKDCPEQMRDFFVLSFKLSQFCPSDKAVLIAQKTCLLMAAAIDLELGRQEVTLSEQVEFWNQALQHLQACREIWKVLKLTGDFSKDPTDTLLLLYEFEARSKLNDPTLNNFMESIWEQPHVEIKTLEIIASLAMEPPARYPVLCKKALKSALNLYRKQSTTDAVKFSNCLHSLINLSLPTGVTDLDACVLQEVWGYFEDALSVVSSTVS
SIO_010081: TEX11
subclass of: SO_0000673
so part of: TEX11
location: join(590475..590505,590601..590713,592373..592457,593681..593760,594190..594270,594353..594472,595929..596009,597670..597755,599176..599233,599925..600020,601089..601170,601591..601669,602373..602524,603224..603309,603816..603953,606690..606775,607393..607440,608141..608181,609344..609430,610288..610358,610827..610943,611741..611813,613237..613386,614313..614421,615366..615495)
location: region:590475-615495:1
so has part: feature:590475-590505:1:exon
so has part: feature:590601-590713:1:exon
so has part: feature:592373-592457:1:exon
so has part: feature:593681-593760:1:exon
so has part: feature:594190-594270:1:exon
so has part: feature:594353-594472:1:exon
so has part: feature:595929-596009:1:exon
so has part: feature:597670-597755:1:exon
so has part: feature:599176-599233:1:exon
so has part: feature:599925-600020:1:exon
so has part: feature:601089-601170:1:exon
so has part: feature:601591-601669:1:exon
so has part: feature:602373-602524:1:exon
so has part: feature:603224-603309:1:exon
so has part: feature:603816-603953:1:exon
so has part: feature:606690-606775:1:exon
so has part: feature:607393-607440:1:exon
so has part: feature:608141-608181:1:exon
so has part: feature:609344-609430:1:exon
so has part: feature:610288-610358:1:exon
so has part: feature:610827-610943:1:exon
so has part: feature:611741-611813:1:exon
so has part: feature:613237-613386:1:exon
so has part: feature:614313-614421:1:exon
so has part: feature:615366-615495:1:exon

XP_019473614.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:590475-590505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590601-590713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592373-592457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593681-593760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594190-594270:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594353-594472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595929-596009:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597670-597755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599176-599233:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599925-600020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:601089-601170:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:601591-601669:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602373-602524:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:603224-603309:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:603816-603953:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:606690-606775:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:607393-607440:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:608141-608181:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:609344-609430:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:610288-610358:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:610827-610943:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:611741-611813:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:613237-613386:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:614313-614421:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:615366-615495:1:exon

TEX11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TEX11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-expressed protein 11 isoform X2
translation: MVGGQLGAAGELLRELLVEEAPPRIAALIEELFRAAGALGEADGSAAEIEEDAINLWNWAVTKHTGSVISDEQRAKLRFVACRLVYLCEGSNPPEGTIRRQILMSMKTGKGWIDVGKADLADEFLEIAMNSIEKLYAKLRKEGDGEADIPVCKADVEKDLFKVLSYQAESAVAQGDFQKATQCVQRCKDMLVRLPRETRYLAILCYNFGVETYDCKKYEQSSFWLSQSYDIGKMDMKNSIGKEMQAKVLRLLATAYFEWDCSLYLDKALKAINLANEENLHPAGFFLKVKILLKSGASDEDISSAVAEFQRHEMSLDFCLNTAKLLLEHGRESVGFDFLKSVAERFEASPDFGKVTLLYIEFLLQNKRELLAKQKVEEIIIGHYTGKQLLPETLNRLHIILWDTAAKHYEAKSYSEALNWYNYSVSFYTPGQIDQNLAKLQRNMASCYLHLKQIDKAKEAVKEAERCDPNSIFTQFSVYKIAVMENDTDKAVEAIIEMGKLAEKPSQHEDKLIVDESMSTNLLSLAAQIALENDQQVVAIRALEHLSEHSQDCQQIFAALKCLIRLTLSKVEKEEKRDKDIKSMLTYLTLAHQRLAEPFTEENLTRDVRTSEAHWFRRVAWNLAVQLKDCPEQMRDFFVLSFKLSQFCPSDKAVLIAQKTCLLMAAAIDLELGRQEVTLSEQVEFWNQALQHLQACREIWKVLKLTGDFSKDPTDTLLLLYEFEARSKLNDPTLNNFMESIWEQPHVEIKTLEIIAFLTDEPTTKKTGEKHQLVTGPGNKQMLTMK
SIO_010081: TEX11
subclass of: SO_0000673
so part of: TEX11
location: join(590475..590505,590601..590713,592373..592457,593681..593760,594190..594270,594353..594472,595929..596009,597670..597755,599176..599233,599925..600020,601089..601170,601591..601669,602373..602524,603224..603309,603816..603953,604609..604711,605828..605952,606690..606775,607393..607440,608141..608181,609344..609430,610288..610358,610827..610943,611741..611813,613237..613386,614159..614250)
location: region:590475-614250:1
so has part: feature:590475-590505:1:exon
so has part: feature:590601-590713:1:exon
so has part: feature:592373-592457:1:exon
so has part: feature:593681-593760:1:exon
so has part: feature:594190-594270:1:exon
so has part: feature:594353-594472:1:exon
so has part: feature:595929-596009:1:exon
so has part: feature:597670-597755:1:exon
so has part: feature:599176-599233:1:exon
so has part: feature:599925-600020:1:exon
so has part: feature:601089-601170:1:exon
so has part: feature:601591-601669:1:exon
so has part: feature:602373-602524:1:exon
so has part: feature:603224-603309:1:exon
so has part: feature:603816-603953:1:exon
so has part: feature:604609-604711:1:exon
so has part: feature:605828-605952:1:exon
so has part: feature:606690-606775:1:exon
so has part: feature:607393-607440:1:exon
so has part: feature:608141-608181:1:exon
so has part: feature:609344-609430:1:exon
so has part: feature:610288-610358:1:exon
so has part: feature:610827-610943:1:exon
so has part: feature:611741-611813:1:exon
so has part: feature:613237-613386:1:exon
so has part: feature:614159-614250:1:exon

XP_019473613.1
type: Protein
SIO_000068: ncbiprotein

position:614250:1
position: 614250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590475-590505:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590601-590713:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:592373-592457:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:593681-593760:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:594190-594270:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:594353-594472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:595929-596009:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:597670-597755:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599176-599233:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599925-600020:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:601089-601170:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:601591-601669:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:602373-602524:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:603224-603309:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:603816-603953:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:604609-604711:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:605828-605952:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:606690-606775:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:607393-607440:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:608141-608181:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:609344-609430:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:610288-610358:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:610827-610943:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:611741-611813:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:613237-613386:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:614159-614250:1:exon

SLC7A3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SLC7A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 616240..621716
location: region:616240-621716:1
so has part: feature:616240-621716:1:exon
subclass of: SO_0000010

100544186
type: Gene
SIO_000068: ncbigene

position:616240:1
position: 616240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621716:1
position: 621716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616240-621716:1:exon

SLC7A3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SLC7A3
product: solute carrier family 7 member 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 208 samples with support for all annotated introns
transcript id: XM_010714979.3
SIO_010081: SLC7A3
subclass of: SO_0000673
so part of: SLC7A3
location: join(616240..617217,617417..617575,617650..617830,617938..618050,618632..618854,619024..619163,619243..619345,619779..619990,620372..620538,620762..620870,620999..621716)
location: region:616240-621716:1
so has part: feature:616240-617217:1:exon
so has part: feature:617417-617575:1:exon
so has part: feature:617650-617830:1:exon
so has part: feature:617938-618050:1:exon
so has part: feature:618632-618854:1:exon
so has part: feature:619024-619163:1:exon
so has part: feature:619243-619345:1:exon
so has part: feature:619779-619990:1:exon
so has part: feature:620372-620538:1:exon
so has part: feature:620762-620870:1:exon
so has part: feature:620999-621716:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616240-617217:1:exon

position:617217:1
position: 617217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:617417-617575:1:exon

position:617417:1
position: 617417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617575:1
position: 617575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:617650-617830:1:exon

position:617650:1
position: 617650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617830:1
position: 617830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617938-618050:1:exon

position:617938:1
position: 617938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618050:1
position: 618050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:618632-618854:1:exon

position:618632:1
position: 618632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:618854:1
position: 618854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:619024-619163:1:exon

position:619024:1
position: 619024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619163:1
position: 619163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:619243-619345:1:exon

position:619243:1
position: 619243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619345:1
position: 619345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:619779-619990:1:exon

position:619779:1
position: 619779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:619990:1
position: 619990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:620372-620538:1:exon

position:620372:1
position: 620372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620538:1
position: 620538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:620762-620870:1:exon

position:620762:1
position: 620762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:620870:1
position: 620870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:620999-621716:1:exon

position:620999:1
position: 620999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC7A3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SLC7A3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cationic amino acid transporter 3
translation: MFGGKMSSLGKKLIRRRVVDLSSEETRFARCLSTLDLIALGVGSTLGAGVYVLTGEVAKDTAGPSIVLCFLVAALSSILAGLCYAEFGARVPKTGSAYLYSYVTVGEIWAFTTGWNLILSYVIGTASVARAWSAAFDNIIGNQISTFFMNKTTLHLPGVLAERPDFFALILIALLTALLTFGVSESALVNKIFTAVNLLVLAFVFIAGCIKGDIKNWQLTVEDYINLTHSDEPEEVRIKTFGSGGFVPFKLEGVLMGAATCFYAFVGFDCIATTGEEARNPQRSIPIGIIVSLLICFVAYFGVSAALTLMVPYFLLNKKSPLPEAFKAVGWEPARYAVAIGSLCALSTSLLGSMFPMPRVIYAMAEDGLLFKFLSKINSRTKTPLSATITSGLLAAVLAFLLDLKDLVDLMSIGTLLAYSLVAVCVLILRYQPGQLNSPKAMEMLELNGNEEERVVMNPNIAATGTKQKETLSLTALFNPSADTPTALSGRIVYICVSIMAVLVTIICVVLTLQVKALKEANVASILVLVLLLVALLIPTIIIWRQPQSNARLNFKVPFLPLLPLCSIFVNILLMVQLSTGTWVRFAIWMAVGFMIYFGYGIRNSVEGKNAKELRGSTTENPLHHPGMELSPGAAAI
SIO_010081: SLC7A3
subclass of: SO_0000673
so part of: SLC7A3
location: join(616848..617217,617417..617575,617650..617830,617938..618050,618632..618854,619024..619163,619243..619345,619779..619990,620372..620538,620762..620870,620999..621135)
location: region:616848-621135:1
so has part: feature:616848-617217:1:exon
so has part: feature:617417-617575:1:exon
so has part: feature:617650-617830:1:exon
so has part: feature:617938-618050:1:exon
so has part: feature:618632-618854:1:exon
so has part: feature:619024-619163:1:exon
so has part: feature:619243-619345:1:exon
so has part: feature:619779-619990:1:exon
so has part: feature:620372-620538:1:exon
so has part: feature:620762-620870:1:exon
so has part: feature:620999-621135:1:exon

XP_010713281.1
type: Protein
SIO_000068: ncbiprotein

position:616848:1
position: 616848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:621135:1
position: 621135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616848-617217:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:617417-617575:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617650-617830:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617938-618050:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618632-618854:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:619024-619163:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619243-619345:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619779-619990:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:620372-620538:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:620762-620870:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:620999-621135:1:exon

LOC100544344
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 621744..625747
location: region:621744-625747:1
so has part: feature:621744-625747:1:exon
subclass of: SO_0000010

100544344
type: Gene
SIO_000068: ncbigene

position:621744:1
position: 621744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625747:1
position: 625747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621744-625747:1:exon

LOC100544344
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544344
product: serine protease 23-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_010714982.3
SIO_010081: LOC100544344
subclass of: SO_0000673
so part of: LOC100544344
location: join(621744..623444,623547..625747)
location: region:621744-625747:1
so has part: feature:621744-623444:1:exon
so has part: feature:623547-625747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621744-623444:1:exon

position:623444:1
position: 623444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623547-625747:1:exon

position:623547:1
position: 623547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100544344
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544344
product: serine protease 23-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 116 samples with support for all annotated introns
transcript id: XM_010714981.3
SIO_010081: LOC100544344
subclass of: SO_0000673
so part of: LOC100544344
location: join(621744..623147,623547..625747)
location: region:621744-625747:1
so has part: feature:621744-623147:1:exon
so has part: feature:623547-625747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621744-623147:1:exon

position:623147:1
position: 623147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623547-625747:1:exon

LOC100544344
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease 23-like isoform X1
translation: MHLPLPCRNSGTELSSPSSGSRFGKMTRCQVIAILLLSFLPRTAAGSSLPTLVPRSTVQLGRAQFSARAVLELATRCDQACVRREAALLPQDFQEYLFYETLYANGTRTLTTVELSPGEGSTERRWPRRRMRRKRQIYGTDGRFSISGNHFLMDYPFSTTVKISTGCTGVLVSEQHVLTAAHCVHDGRDYVKGAKKIKVGFLTPANGTGRPVMRWARVRRTQVPKGWIQSLNSVSMDYDYALLELRRPHRRPHMELTVAPAAEEMAGKRIHFSGFDSDRPGELVYRFCGVEDETAHLIYQHCDARPGASGSGVYGKVWDPVRHKWERKVIGIFSGHQWLEVGGEQHDYNVAVRLTAPKFAQICYWIRGDYKGCQNE
SIO_010081: LOC100544344
subclass of: SO_0000673
so part of: LOC100544344
location: join(623083..623147,623547..624612)
location: region:623083-624612:1
so has part: feature:623083-623147:1:exon
so has part: feature:623547-624612:1:exon

XP_010713283.1
type: Protein
SIO_000068: ncbiprotein

position:623083:1
position: 623083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624612:1
position: 624612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623083-623147:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623547-624612:1:exon

LOC100544344
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine protease 23-like isoform X2
translation: MTRCQVIAILLLSFLPRTAAGSSLPTLVPRSTVQLGRAQFSARAVLELATRCDQACVRREAALLPQDFQEYLFYETLYANGTRTLTTVELSPGEGSTERRWPRRRMRRKRQIYGTDGRFSISGNHFLMDYPFSTTVKISTGCTGVLVSEQHVLTAAHCVHDGRDYVKGAKKIKVGFLTPANGTGRPVMRWARVRRTQVPKGWIQSLNSVSMDYDYALLELRRPHRRPHMELTVAPAAEEMAGKRIHFSGFDSDRPGELVYRFCGVEDETAHLIYQHCDARPGASGSGVYGKVWDPVRHKWERKVIGIFSGHQWLEVGGEQHDYNVAVRLTAPKFAQICYWIRGDYKGCQNE
SIO_010081: LOC100544344
subclass of: SO_0000673
so part of: LOC100544344
location: 623557..624612
location: region:623557-624612:1
so has part: feature:623557-624612:1:exon

XP_010713284.1
type: Protein
SIO_000068: ncbiprotein

position:623557:1
position: 623557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623557-624612:1:exon

LOC100544502
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100544502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(626806..>629272)
location: region:626806-629272:-1
so has part: feature:626806-629272:-1:exon
subclass of: SO_0000010

100544502
type: Gene
SIO_000068: ncbigene

position:626806:-1
position: 626806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629272:-1
position: 629272
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:626806-629272:-1:exon

LOC100544502
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100544502
product: nuclear cap-binding protein subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010715129.2
SIO_010081: LOC100544502
subclass of: SO_0000673
so part of: LOC100544502
location: complement(join(626806..627566,628223..628361,629049..>629272))
location: region:626806-629272:-1
so has part: feature:629049-629272:-1:exon
so has part: feature:628223-628361:-1:exon
so has part: feature:626806-627566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629049-629272:-1:exon

position:629049:-1
position: 629049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:628223-628361:-1:exon

position:628223:-1
position: 628223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628361:-1
position: 628361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:626806-627566:-1:exon

position:627566:-1
position: 627566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100544502
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100544502
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear cap-binding protein subunit 2
translation: PPGVSPPCARLCPQGSKKLQEKFLKISSTLYVGNLSFYTTEEQIQELFSKCGDVKRIVMGLDKIKKTPCGFCFVEYYTRADAEHAMRFINGTRLDDRIVRTDWDAGFKEGRQYGRGKTGGQVRDEYRTDYDVGRGGFGKIIQMQKANQQPAVY
SIO_010081: LOC100544502
subclass of: SO_0000673
so part of: LOC100544502
location: complement(join(627468..627566,628223..628361,629049..>629272))
location: region:627468-629272:-1
so has part: feature:629049-629272:-1:exon
so has part: feature:628223-628361:-1:exon
so has part: feature:627468-627566:-1:exon

XP_010713431.1
type: Protein
SIO_000068: ncbiprotein

position:627468:-1
position: 627468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629049-629272:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:628223-628361:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:627468-627566:-1:exon

LOC116216921
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116216921
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 629381..633571
location: region:629381-633571:1
so has part: feature:629381-633571:1:exon
subclass of: SO_0000011

116216921
type: Gene
SIO_000068: ncbigene

position:629381:1
position: 629381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:633571:1
position: 633571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629381-633571:1:exon

LOC116216921
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216921
product: uncharacterized LOC116216921, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XR_004160592.1
SIO_010081: LOC116216921
subclass of: SO_0000673
so part of: LOC116216921
location: join(629381..630585,631241..631341,631715..633571)
location: region:629381-633571:1
so has part: feature:629381-630585:1:exon
so has part: feature:631241-631341:1:exon
so has part: feature:631715-633571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629381-630585:1:exon

position:630585:1
position: 630585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:631241-631341:1:exon

position:631241:1
position: 631241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631341:1
position: 631341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631715-633571:1:exon

position:631715:1
position: 631715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116216921
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216921
product: uncharacterized LOC116216921, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004160596.1
SIO_010081: LOC116216921
subclass of: SO_0000673
so part of: LOC116216921
location: join(629381..630585,631241..631341,631715..632503,633194..633571)
location: region:629381-633571:1
so has part: feature:629381-630585:1:exon
so has part: feature:631241-631341:1:exon
so has part: feature:631715-632503:1:exon
so has part: feature:633194-633571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629381-630585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631241-631341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631715-632503:1:exon

position:632503:1
position: 632503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:633194-633571:1:exon

position:633194:1
position: 633194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116216921
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216921
product: uncharacterized LOC116216921, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_004160595.1
SIO_010081: LOC116216921
subclass of: SO_0000673
so part of: LOC116216921
location: join(629381..630585,631241..631341,631715..631987,632124..633571)
location: region:629381-633571:1
so has part: feature:629381-630585:1:exon
so has part: feature:631241-631341:1:exon
so has part: feature:631715-631987:1:exon
so has part: feature:632124-633571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629381-630585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631241-631341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631715-631987:1:exon

position:631987:1
position: 631987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:632124-633571:1:exon

position:632124:1
position: 632124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116216921
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216921
product: uncharacterized LOC116216921, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004160594.1
SIO_010081: LOC116216921
subclass of: SO_0000673
so part of: LOC116216921
location: join(629381..630585,631241..631341,631715..631787,631898..633571)
location: region:629381-633571:1
so has part: feature:629381-630585:1:exon
so has part: feature:631241-631341:1:exon
so has part: feature:631715-631787:1:exon
so has part: feature:631898-633571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629381-630585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631241-631341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631715-631787:1:exon

position:631787:1
position: 631787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:631898-633571:1:exon

position:631898:1
position: 631898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116216921
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216921
product: uncharacterized LOC116216921, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004160597.1
SIO_010081: LOC116216921
subclass of: SO_0000673
so part of: LOC116216921
location: join(629381..630585,631241..631341,631715..631787,631951..633571)
location: region:629381-633571:1
so has part: feature:629381-630585:1:exon
so has part: feature:631241-631341:1:exon
so has part: feature:631715-631787:1:exon
so has part: feature:631951-633571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629381-630585:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:631241-631341:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:631715-631787:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631951-633571:1:exon

position:631951:1
position: 631951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116216921
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216921
product: uncharacterized LOC116216921, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_004160598.1
SIO_010081: LOC116216921
subclass of: SO_0000673
so part of: LOC116216921
location: join(629381..629822,630520..630585,631241..631341,631715..633571)
location: region:629381-633571:1
so has part: feature:629381-629822:1:exon
so has part: feature:630520-630585:1:exon
so has part: feature:631241-631341:1:exon
so has part: feature:631715-633571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629381-629822:1:exon

position:629822:1
position: 629822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:630520-630585:1:exon

position:630520:1
position: 630520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631241-631341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631715-633571:1:exon

LOC116216921
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC116216921
product: uncharacterized LOC116216921, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_004160593.1
SIO_010081: LOC116216921
subclass of: SO_0000673
so part of: LOC116216921
location: join(629381..629506,629583..630585,631241..631341,631715..633571)
location: region:629381-633571:1
so has part: feature:629381-629506:1:exon
so has part: feature:629583-630585:1:exon
so has part: feature:631241-631341:1:exon
so has part: feature:631715-633571:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629381-629506:1:exon

position:629506:1
position: 629506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:629583-630585:1:exon

position:629583:1
position: 629583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:631241-631341:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:631715-633571:1:exon

SNX12
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: SNX12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <635033..637623
location: region:635033-637623:1
so has part: feature:635033-637623:1:exon
subclass of: SO_0000010

116216922
type: Gene
SIO_000068: ncbigene

position:635033:1
position: 635033
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:637623:1
position: 637623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635033-637623:1:exon

SNX12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: SNX12
product: sorting nexin 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_031554618.1
SIO_010081: SNX12
subclass of: SO_0000673
so part of: SNX12
location: join(<635033..635164,635363..635487,635966..637623)
location: region:635033-637623:1
so has part: feature:635033-635164:1:exon
so has part: feature:635363-635487:1:exon
so has part: feature:635966-637623:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:635033-635164:1:exon

position:635164:1
position: 635164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:635363-635487:1:exon

position:635363:1
position: 635363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:635487:1
position: 635487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:635966-637623:1:exon

position:635966:1
position: 635966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNX12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: SNX12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sorting nexin-12
translation: STLQINCFSLLQTNLPIFKLKESCVRRRYSDFEWLKNELERDSKIVVPPLPGKALKRQLPFRGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQEETIDRNYVPGKVRQ
SIO_010081: SNX12
subclass of: SO_0000673
so part of: SNX12
location: join(<635033..635164,635363..635487,635966..636068)
location: region:635033-636068:1
so has part: feature:635033-635164:1:exon
so has part: feature:635363-635487:1:exon
so has part: feature:635966-636068:1:exon

XP_031410478.1
type: Protein
SIO_000068: ncbiprotein

position:636068:1
position: 636068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:635033-635164:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:635363-635487:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:635966-636068:1:exon

FOXO4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FOXO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(639906..656537)
location: region:639906-656537:-1
so has part: feature:639906-656537:-1:exon
subclass of: SO_0000010

100543877
type: Gene
SIO_000068: ncbigene

position:639906:-1
position: 639906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656537:-1
position: 656537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:639906-656537:-1:exon

FOXO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FOXO4
product: forkhead box O4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010715131.2
SIO_010081: FOXO4
subclass of: SO_0000673
so part of: FOXO4
location: complement(join(639906..644411,647707..648947,656069..656242,656520..656537))
location: region:639906-656537:-1
so has part: feature:656520-656537:-1:exon
so has part: feature:656069-656242:-1:exon
so has part: feature:647707-648947:-1:exon
so has part: feature:639906-644411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656520-656537:-1:exon

position:656520:-1
position: 656520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:656069-656242:-1:exon

position:656069:-1
position: 656069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:656242:-1
position: 656242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:647707-648947:-1:exon

position:647707:-1
position: 647707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:648947:-1
position: 648947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:639906-644411:-1:exon

position:644411:-1
position: 644411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FOXO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FOXO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: forkhead box protein O4
translation: MASSLRGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRSVPYFKDKGDSNSSAGWKNSIRHNLSLHSKFIKVHNEATGKSSWWMLNPEGGKSGKAPRRRAASMDNSSKLAKVRSKASKKKPPLQSAPEATADSPGSQFPKWPGSPSSRSNEDSDVWNTFRPRTSSNASTISARLSPILTEQDDLHDEELLPSMVYSSASSNVPPTVTEELELIDGLNLMSPSSSVLSTQQSASSGQIQRDSSFSLRSPNAAGQTTTFGNSLFNPVEMSLQSSVSHFSGPQTLEALLTPGSPPPRDVLMTQVDPVLPQTGGRMSSRTLLLLGGQSTQSKMSSGNVRGKPAEQQAEPVGASVLPSTLPIVASPQNTASINSLKTPVSATAAQSVQLGSPPLLSSAGPAPLGLNQDRLPIDLDIDMYMENLECDMDYIINSELMDGEGLDFNFEPVPSTPSYPSSSQASSHTWVPS
SIO_010081: FOXO4
subclass of: SO_0000673
so part of: FOXO4
location: complement(join(647724..648947,656069..656242,656520..656537))
location: region:647724-656537:-1
so has part: feature:656520-656537:-1:exon
so has part: feature:656069-656242:-1:exon
so has part: feature:647724-648947:-1:exon

XP_010713433.1
type: Protein
SIO_000068: ncbiprotein

position:647724:-1
position: 647724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656520-656537:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:656069-656242:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:647724-648947:-1:exon

LOC104912103
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 656414..659936
location: region:656414-659936:1
so has part: feature:656414-659936:1:exon
subclass of: SO_0000010

104912103
type: Gene
SIO_000068: ncbigene

position:656414:1
position: 656414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659936:1
position: 659936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656414-659936:1:exon

LOC104912103
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912103
product: sestrin-3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 175 samples with support for all annotated introns
transcript id: XM_010714983.3
SIO_010081: LOC104912103
subclass of: SO_0000673
so part of: LOC104912103
location: join(656414..657112,657210..657392,657478..657714,657797..657908,658009..658127,658494..658684,659148..659292,659715..659936)
location: region:656414-659936:1
so has part: feature:656414-657112:1:exon
so has part: feature:657210-657392:1:exon
so has part: feature:657478-657714:1:exon
so has part: feature:657797-657908:1:exon
so has part: feature:658009-658127:1:exon
so has part: feature:658494-658684:1:exon
so has part: feature:659148-659292:1:exon
so has part: feature:659715-659936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:656414-657112:1:exon

position:657112:1
position: 657112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:657210-657392:1:exon

position:657210:1
position: 657210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657392:1
position: 657392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:657478-657714:1:exon

position:657478:1
position: 657478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657714:1
position: 657714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:657797-657908:1:exon

position:657797:1
position: 657797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:657908:1
position: 657908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:658009-658127:1:exon

position:658009:1
position: 658009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658127:1
position: 658127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:658494-658684:1:exon

position:658494:1
position: 658494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658684:1
position: 658684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:659148-659292:1:exon

position:659148:1
position: 659148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659292:1
position: 659292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:659715-659936:1:exon

position:659715:1
position: 659715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC104912103
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912103
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sestrin-3-like
translation: MSGGEPERPQFLFVKALASRGRLEAVTQQMGYHPRYLDSFLKTQHYLLHMDGPLPFDCRHYIAIMAAARHHCRYLVNLHVLQFLRAGGDPQWLRGLDFIPPKLRNLNEINKILAHRPWLITKEHIEKLLKISEWSWSLAELVHAVVLLAHCHALASFVFGCGCEQEEGPGGRGSLKPSSPGNQCFCEAAMGNGCGQELLRINRKRSLDSCMELDSLRERVQRIHVETEGREETRPLPPDREEDTDGEVTGAANLACYLQDPDFGYQDFARRDEEQTQVFRVQDYSWEDHGFSLVNRLYSDIGHLLDEKFRMVDGLQSSAMAKRQGCEPSVFKRGIWNYIHCMFGIRYDDYDYAEVNHLLERMLKVYIKTVTCYPEKTNPEMFDRFWKQFKHSEKVHVNLLILEARMQAELLYALQAITQYMVS
SIO_010081: LOC104912103
subclass of: SO_0000673
so part of: LOC104912103
location: join(656918..657112,657210..657392,657478..657714,657797..657908,658009..658127,658494..658684,659148..659292,659715..659804)
location: region:656918-659804:1
so has part: feature:656918-657112:1:exon
so has part: feature:657210-657392:1:exon
so has part: feature:657478-657714:1:exon
so has part: feature:657797-657908:1:exon
so has part: feature:658009-658127:1:exon
so has part: feature:658494-658684:1:exon
so has part: feature:659148-659292:1:exon
so has part: feature:659715-659804:1:exon

XP_010713285.1
type: Protein
SIO_000068: ncbiprotein

position:656918:1
position: 656918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659804:1
position: 659804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:656918-657112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:657210-657392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:657478-657714:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:657797-657908:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658009-658127:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:658494-658684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:659148-659292:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:659715-659804:1:exon

IL2RG
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: IL2RG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 660682..663517
location: region:660682-663517:1
so has part: feature:660682-663517:1:exon
subclass of: SO_0000010

104912104
type: Gene
SIO_000068: ncbigene

position:660682:1
position: 660682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663517:1
position: 663517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660682-663517:1:exon

IL2RG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: IL2RG
product: interleukin 2 receptor subunit gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 185 samples with support for all annotated introns
transcript id: XM_010714984.3
SIO_010081: IL2RG
subclass of: SO_0000673
so part of: IL2RG
location: join(660682..660839,661655..661745,661859..662043,662142..662284,662385..662734,662805..662889,662970..663517)
location: region:660682-663517:1
so has part: feature:660682-660839:1:exon
so has part: feature:661655-661745:1:exon
so has part: feature:661859-662043:1:exon
so has part: feature:662142-662284:1:exon
so has part: feature:662385-662734:1:exon
so has part: feature:662805-662889:1:exon
so has part: feature:662970-663517:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:660682-660839:1:exon

position:660839:1
position: 660839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:661655-661745:1:exon

position:661655:1
position: 661655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:661745:1
position: 661745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:661859-662043:1:exon

position:661859:1
position: 661859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662043:1
position: 662043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:662142-662284:1:exon

position:662142:1
position: 662142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662284:1
position: 662284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:662385-662734:1:exon

position:662385:1
position: 662385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662734:1
position: 662734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:662805-662889:1:exon

position:662805:1
position: 662805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:662889:1
position: 662889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:662970-663517:1:exon

position:662970:1
position: 662970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL2RG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: IL2RG
product: interleukin 2 receptor subunit gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 167 samples with support for all annotated introns
transcript id: XM_010714985.3
SIO_010081: IL2RG
subclass of: SO_0000673
so part of: IL2RG
location: join(660682..660839,661655..661745,661859..662043,662142..662284,662385..662734,662805..662889,662970..663151,663246..663516)
location: region:660682-663516:1
so has part: feature:660682-660839:1:exon
so has part: feature:661655-661745:1:exon
so has part: feature:661859-662043:1:exon
so has part: feature:662142-662284:1:exon
so has part: feature:662385-662734:1:exon
so has part: feature:662805-662889:1:exon
so has part: feature:662970-663151:1:exon
so has part: feature:663246-663516:1:exon

position:663516:1
position: 663516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660682-660839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661655-661745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661859-662043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662142-662284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662385-662734:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662805-662889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662970-663151:1:exon

position:663151:1
position: 663151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:663246-663516:1:exon

position:663246:1
position: 663246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL2RG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: IL2RG
product: interleukin 2 receptor subunit gamma, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 183 samples with support for all annotated introns
transcript id: XM_010714986.3
SIO_010081: IL2RG
subclass of: SO_0000673
so part of: IL2RG
location: join(660683..660839,661655..661745,661859..662043,662142..662284,662385..662547,662626..662734,662805..662889,662970..663517)
location: region:660683-663517:1
so has part: feature:660683-660839:1:exon
so has part: feature:661655-661745:1:exon
so has part: feature:661859-662043:1:exon
so has part: feature:662142-662284:1:exon
so has part: feature:662385-662547:1:exon
so has part: feature:662626-662734:1:exon
so has part: feature:662805-662889:1:exon
so has part: feature:662970-663517:1:exon

position:660683:1
position: 660683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660683-660839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661655-661745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661859-662043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662142-662284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662385-662547:1:exon

position:662547:1
position: 662547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:662626-662734:1:exon

position:662626:1
position: 662626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:662805-662889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662970-663517:1:exon

IL2RG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: IL2RG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine receptor common subunit gamma isoform X1
translation: MAVSGASLVPILLGLGISLASAHSPKEVECILFNEEYMTCKWGSGQTLTANYSLYYWYGNKSPVVECQQYLWEHSVRIGCRFEQREIIQFQPFHVRVNASQDGRTLEIPSNCMELQNLVKPEAPVNLTIRNMSSNQLQLTWSSPYPKAHCLEHVVKYKSNKDTSWMKQEVKGDIFSFPSVDYEKYYTFYVRSKINNYCGSTQLWSEWSVPVFWGSNATSKGRSSPEPPGSPLRLLTVLTVSPRLVAGMADEHLQLFWIHTVLIPIASCLLLLVLVVLLVRMERVWVIIMPRIPNPSKNFDDLFITHNGDFQEWVGVPKDVVESFKPNYSESICHVSELPYEPFQDSSTHLPGVPGPQEHGPYKNSYVGA
SIO_010081: IL2RG
subclass of: SO_0000673
so part of: IL2RG
location: join(660761..660839,661655..661745,661859..662043,662142..662284,662385..662734,662805..662889,662970..663146)
location: region:660761-663146:1
so has part: feature:660761-660839:1:exon
so has part: feature:661655-661745:1:exon
so has part: feature:661859-662043:1:exon
so has part: feature:662142-662284:1:exon
so has part: feature:662385-662734:1:exon
so has part: feature:662805-662889:1:exon
so has part: feature:662970-663146:1:exon

XP_010713286.1
type: Protein
SIO_000068: ncbiprotein

position:660761:1
position: 660761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:663146:1
position: 663146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:660761-660839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661655-661745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661859-662043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662142-662284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662385-662734:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662805-662889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662970-663146:1:exon

IL2RG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: IL2RG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine receptor common subunit gamma isoform X1
translation: MAVSGASLVPILLGLGISLASAHSPKEVECILFNEEYMTCKWGSGQTLTANYSLYYWYGNKSPVVECQQYLWEHSVRIGCRFEQREIIQFQPFHVRVNASQDGRTLEIPSNCMELQNLVKPEAPVNLTIRNMSSNQLQLTWSSPYPKAHCLEHVVKYKSNKDTSWMKQEVKGDIFSFPSVDYEKYYTFYVRSKINNYCGSTQLWSEWSVPVFWGSNATSKGRSSPEPPGSPLRLLTVLTVSPRLVAGMADEHLQLFWIHTVLIPIASCLLLLVLVVLLVRMERVWVIIMPRIPNPSKNFDDLFITHNGDFQEWVGVPKDVVESFKPNYSESICHVSELPYEPFQDSSTHLPGVPGPQEHGPYKNSYVGA
SIO_010081: IL2RG
subclass of: SO_0000673
so part of: IL2RG
location: join(660761..660839,661655..661745,661859..662043,662142..662284,662385..662734,662805..662889,662970..663146)
location: region:660761-663146:1
so has part: feature:660761-660839:1:exon
so has part: feature:661655-661745:1:exon
so has part: feature:661859-662043:1:exon
so has part: feature:662142-662284:1:exon
so has part: feature:662385-662734:1:exon
so has part: feature:662805-662889:1:exon
so has part: feature:662970-663146:1:exon

XP_010713287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660761-660839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661655-661745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661859-662043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662142-662284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662385-662734:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662805-662889:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662970-663146:1:exon

IL2RG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: IL2RG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine receptor common subunit gamma isoform X2
translation: MAVSGASLVPILLGLGISLASAHSPKEVECILFNEEYMTCKWGSGQTLTANYSLYYWYGNKSPVVECQQYLWEHSVRIGCRFEQREIIQFQPFHVRVNASQDGRTLEIPSNCMELQNLVKPEAPVNLTIRNMSSNQLQLTWSSPYPKAHCLEHVVKYKSNKDTSWMKQEVKGDIFSFPSVDYEKYYTFYVRSKINNYCGSTQLWSEWSVPVFWGSNATSKGMADEHLQLFWIHTVLIPIASCLLLLVLVVLLVRMERVWVIIMPRIPNPSKNFDDLFITHNGDFQEWVGVPKDVVESFKPNYSESICHVSELPYEPFQDSSTHLPGVPGPQEHGPYKNSYVGA
SIO_010081: IL2RG
subclass of: SO_0000673
so part of: IL2RG
location: join(660761..660839,661655..661745,661859..662043,662142..662284,662385..662547,662626..662734,662805..662889,662970..663146)
location: region:660761-663146:1
so has part: feature:660761-660839:1:exon
so has part: feature:661655-661745:1:exon
so has part: feature:661859-662043:1:exon
so has part: feature:662142-662284:1:exon
so has part: feature:662385-662547:1:exon
so has part: feature:662626-662734:1:exon
so has part: feature:662805-662889:1:exon
so has part: feature:662970-663146:1:exon

XP_010713288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:660761-660839:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:661655-661745:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:661859-662043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:662142-662284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:662385-662547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:662626-662734:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:662805-662889:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:662970-663146:1:exon

C9HXorf65
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: C9HXorf65
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 663607..665392
location: region:663607-665392:1
so has part: feature:663607-665392:1:exon
subclass of: SO_0000010

104912105
type: Gene
SIO_000068: ncbigene

position:663607:1
position: 663607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665392:1
position: 665392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663607-665392:1:exon

C9HXorf65
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: C9HXorf65
product: chromosome 9 CXorf65 homolog
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010714989.2
SIO_010081: C9HXorf65
subclass of: SO_0000673
so part of: C9HXorf65
location: join(663607..663896,663980..664066,664137..664271,664344..664412,664496..664617,665257..665392)
location: region:663607-665392:1
so has part: feature:663607-663896:1:exon
so has part: feature:663980-664066:1:exon
so has part: feature:664137-664271:1:exon
so has part: feature:664344-664412:1:exon
so has part: feature:664496-664617:1:exon
so has part: feature:665257-665392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:663607-663896:1:exon

position:663896:1
position: 663896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:663980-664066:1:exon

position:663980:1
position: 663980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664066:1
position: 664066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:664137-664271:1:exon

position:664137:1
position: 664137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664271:1
position: 664271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:664344-664412:1:exon

position:664344:1
position: 664344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664412:1
position: 664412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:664496-664617:1:exon

position:664496:1
position: 664496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:664617:1
position: 664617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:665257-665392:1:exon

position:665257:1
position: 665257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C9HXorf65
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: C9HXorf65
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: uncharacterized protein CXorf65 homolog
translation: MILGRMGETPERQPPEPPSHFTNAVGQHQATRSHPHSGSMFIYITHSDNQSFLANTDCPVLLLLSHLRSKVGVPPSEVIDLCDKLGSPKMLFHVKTMQDRASDFLPARGTYYVCRVEFGVPGTAQEQTAQSFVPLLKNPSVALTEALRLHGQHPHRKPLRTPKTLEGKKGPNTEMLPTAAHAQGAGKAAGRSAFRPXEKQHGSPRKSTTASGGRQQPRPR
SIO_010081: C9HXorf65
subclass of: SO_0000673
so part of: C9HXorf65
location: join(663755..663896,663980..664066,664137..664271,664344..664412,664496..664617,665257..665363)
location: region:663755-665363:1
so has part: feature:663755-663896:1:exon
so has part: feature:663980-664066:1:exon
so has part: feature:664137-664271:1:exon
so has part: feature:664344-664412:1:exon
so has part: feature:664496-664617:1:exon
so has part: feature:665257-665363:1:exon

XP_010713291.2
type: Protein
SIO_000068: ncbiprotein

position:663755:1
position: 663755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:665363:1
position: 665363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:663755-663896:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:663980-664066:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:664137-664271:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:664344-664412:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:664496-664617:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:665257-665363:1:exon

MED12
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MED12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(668685..703868)
location: region:668685-703868:-1
so has part: feature:668685-703868:-1:exon
subclass of: SO_0000010

100551048
type: Gene
SIO_000068: ncbigene

position:668685:-1
position: 668685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703868:-1
position: 703868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668685-703868:-1:exon

MED12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MED12
product: mediator complex subunit 12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010714987.3
SIO_010081: MED12
subclass of: SO_0000673
so part of: MED12
location: complement(join(668685..669117,671129..671210,671373..671564,674163..674325,674950..675167,675409..675489,675946..676151,676344..676494,676809..677186,677733..677894,678166..678301,678802..678911,679384..679473,679701..679812,679898..680059,680150..680310,680577..680648,680846..681025,683469..683632,683849..683962,684679..684780,685469..685589,685865..686009,686212..686439,687817..687948,688174..688337,689108..689251,689402..689520,690439..690583,690915..691088,691333..691413,691860..692089,692710..692836,693225..693356,694027..694163,694602..694701,694989..695135,697289..697543,698247..698357,698646..698821,700131..700290,701973..702164,703022..703157,703684..703868))
location: region:668685-703868:-1
so has part: feature:703684-703868:-1:exon
so has part: feature:703022-703157:-1:exon
so has part: feature:701973-702164:-1:exon
so has part: feature:700131-700290:-1:exon
so has part: feature:698646-698821:-1:exon
so has part: feature:698247-698357:-1:exon
so has part: feature:697289-697543:-1:exon
so has part: feature:694989-695135:-1:exon
so has part: feature:694602-694701:-1:exon
so has part: feature:694027-694163:-1:exon
so has part: feature:693225-693356:-1:exon
so has part: feature:692710-692836:-1:exon
so has part: feature:691860-692089:-1:exon
so has part: feature:691333-691413:-1:exon
so has part: feature:690915-691088:-1:exon
so has part: feature:690439-690583:-1:exon
so has part: feature:689402-689520:-1:exon
so has part: feature:689108-689251:-1:exon
so has part: feature:688174-688337:-1:exon
so has part: feature:687817-687948:-1:exon
so has part: feature:686212-686439:-1:exon
so has part: feature:685865-686009:-1:exon
so has part: feature:685469-685589:-1:exon
so has part: feature:684679-684780:-1:exon
so has part: feature:683849-683962:-1:exon
so has part: feature:683469-683632:-1:exon
so has part: feature:680846-681025:-1:exon
so has part: feature:680577-680648:-1:exon
so has part: feature:680150-680310:-1:exon
so has part: feature:679898-680059:-1:exon
so has part: feature:679701-679812:-1:exon
so has part: feature:679384-679473:-1:exon
so has part: feature:678802-678911:-1:exon
so has part: feature:678166-678301:-1:exon
so has part: feature:677733-677894:-1:exon
so has part: feature:676809-677186:-1:exon
so has part: feature:676344-676494:-1:exon
so has part: feature:675946-676151:-1:exon
so has part: feature:675409-675489:-1:exon
so has part: feature:674950-675167:-1:exon
so has part: feature:674163-674325:-1:exon
so has part: feature:671373-671564:-1:exon
so has part: feature:671129-671210:-1:exon
so has part: feature:668685-669117:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:703684-703868:-1:exon

position:703684:-1
position: 703684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:703022-703157:-1:exon

position:703022:-1
position: 703022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703157:-1
position: 703157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:701973-702164:-1:exon

position:701973:-1
position: 701973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702164:-1
position: 702164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:700131-700290:-1:exon

position:700131:-1
position: 700131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700290:-1
position: 700290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:698646-698821:-1:exon

position:698646:-1
position: 698646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698821:-1
position: 698821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:698247-698357:-1:exon

position:698247:-1
position: 698247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698357:-1
position: 698357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:697289-697543:-1:exon

position:697289:-1
position: 697289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697543:-1
position: 697543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:694989-695135:-1:exon

position:694989:-1
position: 694989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:695135:-1
position: 695135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:694602-694701:-1:exon

position:694602:-1
position: 694602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694701:-1
position: 694701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:694027-694163:-1:exon

position:694027:-1
position: 694027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:694163:-1
position: 694163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:693225-693356:-1:exon

position:693225:-1
position: 693225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693356:-1
position: 693356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:692710-692836:-1:exon

position:692710:-1
position: 692710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692836:-1
position: 692836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:691860-692089:-1:exon

position:691860:-1
position: 691860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:692089:-1
position: 692089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:691333-691413:-1:exon

position:691333:-1
position: 691333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691413:-1
position: 691413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:690915-691088:-1:exon

position:690915:-1
position: 690915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691088:-1
position: 691088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:690439-690583:-1:exon

position:690439:-1
position: 690439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:690583:-1
position: 690583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:689402-689520:-1:exon

position:689402:-1
position: 689402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689520:-1
position: 689520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:689108-689251:-1:exon

position:689108:-1
position: 689108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:689251:-1
position: 689251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:688174-688337:-1:exon

position:688174:-1
position: 688174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:688337:-1
position: 688337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:687817-687948:-1:exon

position:687817:-1
position: 687817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:687948:-1
position: 687948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:686212-686439:-1:exon

position:686212:-1
position: 686212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686439:-1
position: 686439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:685865-686009:-1:exon

position:685865:-1
position: 685865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686009:-1
position: 686009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:685469-685589:-1:exon

position:685469:-1
position: 685469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:685589:-1
position: 685589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:684679-684780:-1:exon

position:684679:-1
position: 684679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:684780:-1
position: 684780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:683849-683962:-1:exon

position:683849:-1
position: 683849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683962:-1
position: 683962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:683469-683632:-1:exon

position:683469:-1
position: 683469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683632:-1
position: 683632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:680846-681025:-1:exon

position:680846:-1
position: 680846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681025:-1
position: 681025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:680577-680648:-1:exon

position:680577:-1
position: 680577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680648:-1
position: 680648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:680150-680310:-1:exon

position:680150:-1
position: 680150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680310:-1
position: 680310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:679898-680059:-1:exon

position:679898:-1
position: 679898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:680059:-1
position: 680059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:679701-679812:-1:exon

position:679701:-1
position: 679701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679812:-1
position: 679812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:679384-679473:-1:exon

position:679384:-1
position: 679384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:679473:-1
position: 679473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:678802-678911:-1:exon

position:678802:-1
position: 678802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678911:-1
position: 678911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:678166-678301:-1:exon

position:678166:-1
position: 678166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:678301:-1
position: 678301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:677733-677894:-1:exon

position:677733:-1
position: 677733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677894:-1
position: 677894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:676809-677186:-1:exon

position:676809:-1
position: 676809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:677186:-1
position: 677186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:676344-676494:-1:exon

position:676344:-1
position: 676344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676494:-1
position: 676494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:675946-676151:-1:exon

position:675946:-1
position: 675946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:676151:-1
position: 676151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:675409-675489:-1:exon

position:675409:-1
position: 675409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675489:-1
position: 675489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:674950-675167:-1:exon

position:674950:-1
position: 674950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:675167:-1
position: 675167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:674163-674325:-1:exon

position:674163:-1
position: 674163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674325:-1
position: 674325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:671373-671564:-1:exon

position:671373:-1
position: 671373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671564:-1
position: 671564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:671129-671210:-1:exon

position:671129:-1
position: 671129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:671210:-1
position: 671210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:668685-669117:-1:exon

position:669117:-1
position: 669117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MED12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MED12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mediator of RNA polymerase II transcription subunit 12
translation: MNSLCDTLTPRPQHCVSPVLQPDAIPTQRLSRTHSLTHHHRAANLRIGVTTREPTSAPSGQGADRPWFLPPQDELTALNVKQGFNNQPAVSGDEHGSAKNVNFNPAKISSNFSSIIAEKLRCNTLPDTGRRKPQVNQKDNFWLVTARSQSAINNWFTDLAGTKPLTHLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWLIKMTCAYYAAITETKVKKRHVIDPFIEWTQIITKYLSEQLQKIAEFYRQLPGQSCGSPAGPMPQEVEQALKQWDYNEKLAMFMFQDGMLDRHEFLTWVLECFEKIRSGEDEFLKMLLPLLLRYSGEFVQSAYLSRRLAYFCTRRLAMQLDGAGGHPPHILSTQTGNALPSTPTPQPATGNPPPSPFSDLLLCPQHRPVVYGLSCILQSIILCCPSALVWHYSLTDSRIKTGSPLDHLPIAPSNLPMPGGNSAFTQQVRAKLREIEQQIKERGQAVEVRWSFDKCQETTAGFTIGRVLHTLEVLDSHSFERSDFSNSLDSLYNRIFGLGPTKDSHEISPDDDAVVALLCEWAVSYKRSGRHRAMVVAKLLEKRQAEIEAERCGDSEVVDEKGSISSGSLSAASAPVFQDVLMQFLDTQAPMLTDPGKENEKVEFFNLVLLFCELIRHDVFSHNIYMCTLISRGDLAMDSHGPRPPSPFDDPAEEHDRKETEGNSGIKLEDTGLSEPMDIDHNSSTIFDDMEKTDFSMFSPPMHCESKASPSPEKPDPEKEAKPLLKDKSAEGMLASLYDQPRHIQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDARHTIKKITKDILKVLNRKSTAETGGEEGQKRKKSKPEAFPTAEDIFAKFQHLSHFDQHQVTSQVSRNVLEQITSFALGMSYHLPLVQHVQFIFDLMEYSLNISGLIDFAIQLLNELSVVEAELLLKSSDLVGSYTTSLCLCIVAVLRHYHSCLILNQDQMAQVFEGLCGVVKHGMNRSDGSSAERCILAYLYDLYTSCSHLKSKFGELFSDFCSKVKNTIYCNVEPSDSNMLWEPEFMIDTIENPSAHNFTYTNLGKSLNENPANRYSFVCNALMHVCVGHHDPDRVNDIAILCAELTGYCKSLSAEWLGVLKALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLIRCAAIPSLLNAACSEQDSEPGARLTCRILLHLFKTPQLNPCQQDGNKPTVGIRSSCDRHLLAASQNRIVDGAVFAVLKAVFVLGDAELKGSGFSHPGGVDDLMDDELGTRKAGGRVVTVETASLDIYAKYVLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSTQAQRLMQLICYPHRLLDNEEGENPQRQRIKRILQNLDQWTMRQSSLELQLMIKQTANNEMNSLLENIAKATIEVFQQSAETSSASSAGNGVNNISSSASATPASNKSKPILSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELEKGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQIVTNWREDQYQDDCKAKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTVDMQSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSDSLEKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVSTKQKISPWDLFEGLKHSAPLSWGWFGTVRVDRRVSRFEEQQRLLLYHTHLKPKPRSYYLEPLPLPPEEEEPPTPVALEPEKKAVEPSKADKTSSNPATSTEERKKKQSKTKKRNQSASKSEDFVLGPSRGVSYGVGMPTDLLHHQAGSTMSRLAYGQSPVGLYAQNQPLPAGGPRLDTSYRPVRMPLGKLVQSRPPYSGVLPSGMGSMMGIDPSYKPAVYRQQPPVSQGQILRQQLQAKLQGQGIMGQQPVRQMAPTPSYGALQPSQGYTPYVSHIGLQQHPSQSGTMVPPTY…
SIO_010081: MED12
subclass of: SO_0000673
so part of: MED12
location: complement(join(669074..669117,671129..671210,671373..671564,674163..674325,674950..675167,675409..675489,675946..676151,676344..676494,676809..677186,677733..677894,678166..678301,678802..678911,679384..679473,679701..679812,679898..680059,680150..680310,680577..680648,680846..681025,683469..683632,683849..683962,684679..684780,685469..685589,685865..686009,686212..686439,687817..687948,688174..688337,689108..689251,689402..689520,690439..690583,690915..691088,691333..691413,691860..692089,692710..692836,693225..693356,694027..694163,694602..694701,694989..695135,697289..697543,698247..698357,698646..698821,700131..700290,701973..702164,703022..703157,703684..703868))
location: region:669074-703868:-1
so has part: feature:703684-703868:-1:exon
so has part: feature:703022-703157:-1:exon
so has part: feature:701973-702164:-1:exon
so has part: feature:700131-700290:-1:exon
so has part: feature:698646-698821:-1:exon
so has part: feature:698247-698357:-1:exon
so has part: feature:697289-697543:-1:exon
so has part: feature:694989-695135:-1:exon
so has part: feature:694602-694701:-1:exon
so has part: feature:694027-694163:-1:exon
so has part: feature:693225-693356:-1:exon
so has part: feature:692710-692836:-1:exon
so has part: feature:691860-692089:-1:exon
so has part: feature:691333-691413:-1:exon
so has part: feature:690915-691088:-1:exon
so has part: feature:690439-690583:-1:exon
so has part: feature:689402-689520:-1:exon
so has part: feature:689108-689251:-1:exon
so has part: feature:688174-688337:-1:exon
so has part: feature:687817-687948:-1:exon
so has part: feature:686212-686439:-1:exon
so has part: feature:685865-686009:-1:exon
so has part: feature:685469-685589:-1:exon
so has part: feature:684679-684780:-1:exon
so has part: feature:683849-683962:-1:exon
so has part: feature:683469-683632:-1:exon
so has part: feature:680846-681025:-1:exon
so has part: feature:680577-680648:-1:exon
so has part: feature:680150-680310:-1:exon
so has part: feature:679898-680059:-1:exon
so has part: feature:679701-679812:-1:exon
so has part: feature:679384-679473:-1:exon
so has part: feature:678802-678911:-1:exon
so has part: feature:678166-678301:-1:exon
so has part: feature:677733-677894:-1:exon
so has part: feature:676809-677186:-1:exon
so has part: feature:676344-676494:-1:exon
so has part: feature:675946-676151:-1:exon
so has part: feature:675409-675489:-1:exon
so has part: feature:674950-675167:-1:exon
so has part: feature:674163-674325:-1:exon
so has part: feature:671373-671564:-1:exon
so has part: feature:671129-671210:-1:exon
so has part: feature:669074-669117:-1:exon

XP_010713289.3
type: Protein
SIO_000068: ncbiprotein

position:669074:-1
position: 669074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:703684-703868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:703022-703157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:701973-702164:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:700131-700290:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:698646-698821:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698247-698357:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:697289-697543:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:694989-695135:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:694602-694701:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:694027-694163:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:693225-693356:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:692710-692836:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:691860-692089:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:691333-691413:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:690915-691088:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:690439-690583:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:689402-689520:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:689108-689251:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:688174-688337:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:687817-687948:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:686212-686439:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:685865-686009:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:685469-685589:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:684679-684780:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:683849-683962:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:683469-683632:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:680846-681025:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:680577-680648:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:680150-680310:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:679898-680059:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:679701-679812:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:679384-679473:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:678802-678911:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:678166-678301:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:677733-677894:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:676809-677186:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:676344-676494:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:675946-676151:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:675409-675489:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:674950-675167:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:674163-674325:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:671373-671564:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:671129-671210:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:669074-669117:-1:exon

NLGN3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NLGN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(705433..724013)
location: region:705433-724013:-1
so has part: feature:705433-724013:-1:exon
subclass of: SO_0000010

100551203
type: Gene
SIO_000068: ncbigene

position:705433:-1
position: 705433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:724013:-1
position: 724013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705433-724013:-1:exon

NLGN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NLGN3
product: neuroligin 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010714990.3
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: complement(join(705433..707722,708075..708864,711960..712145,713531..713680,715854..715913,720719..720778,722056..724013))
location: region:705433-724013:-1
so has part: feature:722056-724013:-1:exon
so has part: feature:720719-720778:-1:exon
so has part: feature:715854-715913:-1:exon
so has part: feature:713531-713680:-1:exon
so has part: feature:711960-712145:-1:exon
so has part: feature:708075-708864:-1:exon
so has part: feature:705433-707722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:722056-724013:-1:exon

position:722056:-1
position: 722056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:720719-720778:-1:exon

position:720719:-1
position: 720719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720778:-1
position: 720778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:715854-715913:-1:exon

position:715854:-1
position: 715854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715913:-1
position: 715913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:713531-713680:-1:exon

position:713531:-1
position: 713531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713680:-1
position: 713680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:711960-712145:-1:exon

position:711960:-1
position: 711960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712145:-1
position: 712145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:708075-708864:-1:exon

position:708075:-1
position: 708075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708864:-1
position: 708864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:705433-707722:-1:exon

position:707722:-1
position: 707722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NLGN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NLGN3
product: neuroligin 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010714992.3
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: complement(join(705433..707722,708075..708864,711960..712145,713531..713680,715854..715913,722056..724010))
location: region:705433-724010:-1
so has part: feature:722056-724010:-1:exon
so has part: feature:715854-715913:-1:exon
so has part: feature:713531-713680:-1:exon
so has part: feature:711960-712145:-1:exon
so has part: feature:708075-708864:-1:exon
so has part: feature:705433-707722:-1:exon

position:724010:-1
position: 724010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722056-724010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715854-715913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713531-713680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:711960-712145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:708075-708864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:705433-707722:-1:exon

NLGN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NLGN3
product: neuroligin 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_010714994.3
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: complement(join(705433..707722,708075..708864,711960..712145,713531..713680,722056..724005))
location: region:705433-724005:-1
so has part: feature:722056-724005:-1:exon
so has part: feature:713531-713680:-1:exon
so has part: feature:711960-712145:-1:exon
so has part: feature:708075-708864:-1:exon
so has part: feature:705433-707722:-1:exon

position:724005:-1
position: 724005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722056-724005:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713531-713680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:711960-712145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708075-708864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:705433-707722:-1:exon

NLGN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NLGN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-3 isoform X3
translation: MWLILWRSPLLPPVLQVPELVAGWDLRLALWVLSFASVVVRMEGQVYSPTVNTHYGKLRGVRVPLPSEILGPVDQYLGVPYAAPPVGEKRFMPPEPPPSWSGIRNATHFSPVCPQNIHNAVPEIMLPIWFTSNLDIVATYIQDPNEDCLYLNIYIPTEDDIRDSGAKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFGGDPLRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPVKYTSMLADKVGCNVLDTVDMVDCLRQKSAKELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFLNYDIMLGVNQGEGLKFVEGVVDPEDGVSGSDFDYSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADRDNPETRRKTLVALFTDHQWVEPSVVTADLHARYGSPTYFYAFYHHCQSLMKPAWSDAAHGDEVPYVFGIPMIGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPVPQDTKFIHTKANRFEEVAWSKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYTSTTTKVPPPDTTQNSHITRRPNGKIWTTKRPAISPAYNSENGKEKWSPEQEAGTLLESPRDYSTELSVTIAVGASLLFLNVLAFAALYYRKDKRRQDTHRQPSPQRGAANDIAHAPDEEMPSLQAGQAHHECEAVPPHDTLRLAALPDYTLTLRRSPDDIPLMTPNTITMIPNSLVGLQTLHPYNTFAAGFNSTGLPHSHSTTRV
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: complement(join(706885..707722,708075..708864,711960..712145,713531..713680,722056..722533))
location: region:706885-722533:-1
so has part: feature:722056-722533:-1:exon
so has part: feature:713531-713680:-1:exon
so has part: feature:711960-712145:-1:exon
so has part: feature:708075-708864:-1:exon
so has part: feature:706885-707722:-1:exon

XP_010713296.1
type: Protein
SIO_000068: ncbiprotein

position:706885:-1
position: 706885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722533:-1
position: 722533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722056-722533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:713531-713680:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:711960-712145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:708075-708864:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:706885-707722:-1:exon

NLGN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NLGN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-3 isoform X2
translation: MWLILWRSPLLPPVLQVPELVAGWDLRLALWVLSFASVVVRMEGQVYSPTVNTHYGKLRGVRVPLPSEILGPVDQYLGVPYAAPPVGEKRFMPPEPPPSWSGIRNATHFSPVCPQNIHNAVPEIMLPIWFTSNLDIVATYIQDPNEDCLYLNIYIPTEDGASAKKQGEDLADNDGDEDEDIRDSGAKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFGGDPLRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPVKYTSMLADKVGCNVLDTVDMVDCLRQKSAKELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFLNYDIMLGVNQGEGLKFVEGVVDPEDGVSGSDFDYSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADRDNPETRRKTLVALFTDHQWVEPSVVTADLHARYGSPTYFYAFYHHCQSLMKPAWSDAAHGDEVPYVFGIPMIGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPVPQDTKFIHTKANRFEEVAWSKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYTSTTTKVPPPDTTQNSHITRRPNGKIWTTKRPAISPAYNSENGKEKWSPEQEAGTLLESPRDYSTELSVTIAVGASLLFLNVLAFAALYYRKDKRRQDTHRQPSPQRGAANDIAHAPDEEMPSLQAGQAHHECEAVPPHDTLRLAALPDYTLTLRRSPDDIPLMTPNTITMIPNSLVGLQTLHPYNTFAAGFNSTGLPHSHSTTRV
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: complement(join(706885..707722,708075..708864,711960..712145,713531..713680,715854..715913,722056..722533))
location: region:706885-722533:-1
so has part: feature:722056-722533:-1:exon
so has part: feature:715854-715913:-1:exon
so has part: feature:713531-713680:-1:exon
so has part: feature:711960-712145:-1:exon
so has part: feature:708075-708864:-1:exon
so has part: feature:706885-707722:-1:exon

XP_010713294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:722056-722533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:715854-715913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:713531-713680:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:711960-712145:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:708075-708864:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:706885-707722:-1:exon

NLGN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NLGN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-3 isoform X1
translation: MWLILWRSPLLPPVLQVPELVAGWDLRLALWVLSFASVVVRMEGQVYSPTVNTHYGKLRGVRVPLPSEILGPVDQYLGVPYAAPPVGEKRFMPPEPPPSWSGIRNATHFSPVCPQNIHNAVPEIMLPIWFTSNLDIVATYIQDPNEDCLYLNIYIPTEDVKRISKECTRKPNKKICRKGGASAKKQGEDLADNDGDEDEDIRDSGAKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVITLNYRVGVLGFLSTGDQAAKGNYGLLDQIQALRWVSENIAFFGGDPLRITVFGSGIGASCVSLLTLSHHSEGLFQRAIIQSGSALSSWAVNYQPVKYTSMLADKVGCNVLDTVDMVDCLRQKSAKELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFLNYDIMLGVNQGEGLKFVEGVVDPEDGVSGSDFDYSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADRDNPETRRKTLVALFTDHQWVEPSVVTADLHARYGSPTYFYAFYHHCQSLMKPAWSDAAHGDEVPYVFGIPMIGPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPVPQDTKFIHTKANRFEEVAWSKYNPRDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYTSTTTKVPPPDTTQNSHITRRPNGKIWTTKRPAISPAYNSENGKEKWSPEQEAGTLLESPRDYSTELSVTIAVGASLLFLNVLAFAALYYRKDKRRQDTHRQPSPQRGAANDIAHAPDEEMPSLQAGQAHHECEAVPPHDTLRLAALPDYTLTLRRSPDDIPLMTPNTITMIPNSLVGLQTLHPYNTFAAGFNSTGLPHSHSTTRV
SIO_010081: NLGN3
subclass of: SO_0000673
so part of: NLGN3
location: complement(join(706885..707722,708075..708864,711960..712145,713531..713680,715854..715913,720719..720778,722056..722533))
location: region:706885-722533:-1
so has part: feature:722056-722533:-1:exon
so has part: feature:720719-720778:-1:exon
so has part: feature:715854-715913:-1:exon
so has part: feature:713531-713680:-1:exon
so has part: feature:711960-712145:-1:exon
so has part: feature:708075-708864:-1:exon
so has part: feature:706885-707722:-1:exon

XP_010713292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:722056-722533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:720719-720778:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:715854-715913:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:713531-713680:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:711960-712145:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:708075-708864:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:706885-707722:-1:exon

ZMYM3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ZMYM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 737661..763341
location: region:737661-763341:1
so has part: feature:737661-763341:1:exon
subclass of: SO_0000010

100538366
type: Gene
SIO_000068: ncbigene

position:737661:1
position: 737661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:763341:1
position: 763341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:737661-763341:1:exon

ZMYM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZMYM3
product: zinc finger MYM-type containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_010714995.3
SIO_010081: ZMYM3
subclass of: SO_0000673
so part of: ZMYM3
location: join(737661..742816,743487..743527,743932..744001,744803..745091,745478..745655,746082..746294,746880..747030,747629..747744,749762..749848,750160..750310,755387..755445,755973..756141,756739..756854,757027..757201,757740..757886,758705..758808,759203..759371,759491..759642,760067..760181,761126..761380,761469..761586,761953..763341)
location: region:737661-763341:1
so has part: feature:737661-742816:1:exon
so has part: feature:743487-743527:1:exon
so has part: feature:743932-744001:1:exon
so has part: feature:744803-745091:1:exon
so has part: feature:745478-745655:1:exon
so has part: feature:746082-746294:1:exon
so has part: feature:746880-747030:1:exon
so has part: feature:747629-747744:1:exon
so has part: feature:749762-749848:1:exon
so has part: feature:750160-750310:1:exon
so has part: feature:755387-755445:1:exon
so has part: feature:755973-756141:1:exon
so has part: feature:756739-756854:1:exon
so has part: feature:757027-757201:1:exon
so has part: feature:757740-757886:1:exon
so has part: feature:758705-758808:1:exon
so has part: feature:759203-759371:1:exon
so has part: feature:759491-759642:1:exon
so has part: feature:760067-760181:1:exon
so has part: feature:761126-761380:1:exon
so has part: feature:761469-761586:1:exon
so has part: feature:761953-763341:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:737661-742816:1:exon

position:742816:1
position: 742816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:743487-743527:1:exon

position:743487:1
position: 743487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:743527:1
position: 743527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:743932-744001:1:exon

position:743932:1
position: 743932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744001:1
position: 744001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:744803-745091:1:exon

position:744803:1
position: 744803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745091:1
position: 745091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:745478-745655:1:exon

position:745478:1
position: 745478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:745655:1
position: 745655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:746082-746294:1:exon

position:746082:1
position: 746082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:746294:1
position: 746294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:746880-747030:1:exon

position:746880:1
position: 746880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747030:1
position: 747030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:747629-747744:1:exon

position:747629:1
position: 747629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:747744:1
position: 747744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:749762-749848:1:exon

position:749762:1
position: 749762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749848:1
position: 749848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:750160-750310:1:exon

position:750160:1
position: 750160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:750310:1
position: 750310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:755387-755445:1:exon

position:755387:1
position: 755387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755445:1
position: 755445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:755973-756141:1:exon

position:755973:1
position: 755973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756141:1
position: 756141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:756739-756854:1:exon

position:756739:1
position: 756739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:756854:1
position: 756854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:757027-757201:1:exon

position:757027:1
position: 757027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757201:1
position: 757201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:757740-757886:1:exon

position:757740:1
position: 757740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:757886:1
position: 757886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:758705-758808:1:exon

position:758705:1
position: 758705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:758808:1
position: 758808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:759203-759371:1:exon

position:759203:1
position: 759203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759371:1
position: 759371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:759491-759642:1:exon

position:759491:1
position: 759491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759642:1
position: 759642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:760067-760181:1:exon

position:760067:1
position: 760067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:760181:1
position: 760181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:761126-761380:1:exon

position:761126:1
position: 761126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761380:1
position: 761380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:761469-761586:1:exon

position:761469:1
position: 761469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761586:1
position: 761586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:761953-763341:1:exon

position:761953:1
position: 761953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMYM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ZMYM3
product: zinc finger MYM-type containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 107 samples with support for all annotated introns
transcript id: XM_003205626.3
SIO_010081: ZMYM3
subclass of: SO_0000673
so part of: ZMYM3
location: join(741934..742816,743487..743527,743932..744001,744803..745091,745478..745655,746082..746294,746880..747030,747629..747744,749762..749848,750160..750310,750892..751064,751488..751653,755387..755445,755973..756141,756739..756854,757027..757201,757740..757886,758705..758808,759203..759371,759491..759642,760067..760181,761126..761380,761469..761586,761953..763341)
location: region:741934-763341:1
so has part: feature:741934-742816:1:exon
so has part: feature:743487-743527:1:exon
so has part: feature:743932-744001:1:exon
so has part: feature:744803-745091:1:exon
so has part: feature:745478-745655:1:exon
so has part: feature:746082-746294:1:exon
so has part: feature:746880-747030:1:exon
so has part: feature:747629-747744:1:exon
so has part: feature:749762-749848:1:exon
so has part: feature:750160-750310:1:exon
so has part: feature:750892-751064:1:exon
so has part: feature:751488-751653:1:exon
so has part: feature:755387-755445:1:exon
so has part: feature:755973-756141:1:exon
so has part: feature:756739-756854:1:exon
so has part: feature:757027-757201:1:exon
so has part: feature:757740-757886:1:exon
so has part: feature:758705-758808:1:exon
so has part: feature:759203-759371:1:exon
so has part: feature:759491-759642:1:exon
so has part: feature:760067-760181:1:exon
so has part: feature:761126-761380:1:exon
so has part: feature:761469-761586:1:exon
so has part: feature:761953-763341:1:exon

position:741934:1
position: 741934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741934-742816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743487-743527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743932-744001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744803-745091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745478-745655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:746082-746294:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:746880-747030:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747629-747744:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:749762-749848:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:750160-750310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:750892-751064:1:exon

position:750892:1
position: 750892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751064:1
position: 751064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:751488-751653:1:exon

position:751488:1
position: 751488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:751653:1
position: 751653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:755387-755445:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:755973-756141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:756739-756854:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:757027-757201:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:757740-757886:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:758705-758808:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:759203-759371:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:759491-759642:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:760067-760181:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:761126-761380:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:761469-761586:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:761953-763341:1:exon

ZMYM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZMYM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 3 isoform X1
translation: MDSSEISGSLDPLSLPDKPLIGDLPADMEFGEDLLGSQTASTQEAAVLRPPDWDQSKQMTADGDLGLQEKGDSLSEQNKSSDLSLDKPGAVLDVLEKPDVLDDLDGTAGSVENKSEDLDELCKAQPSQDGEGGMGDSSAVSKEALVPETQKEGEDAPKTNSGDLKEDGAAAIPALSDENGPESPPQPAPDSGDLSSAPAIEETTAQPSSPPVAPPQLSLKQPKKTRLKAPRKSSPVQREGLPGDAEGELRPDSSMAALPSEPAQEKKAEEWNDDGNNSLRESTGPRAEEAALPAEGLSRKGSVPQTEKEKRSERARRSESARPETVNSAESIPVSDEDSDAMVDDPNDEDFVPFRTRRSTRMSLRTQVAQRAARSVAKMTCANCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSRRPHGKKICTFCKKEIWNTRDSVVAQIGSGGSFHEFCTSVCLSLYEAQQQRPAPQFADPTDTIRCSVCHKPGEVQHEVSNGNVVHRICSDACFTKFRATKGLKTNCCDYCGLYIYNKGMPVEYLFHEGQQKRFCNSSCLNSYKKKNTRVYPCMWCKTLCKNFDMLPNVDRSGKMGLFCSICCTTSHKVKQSGLVGPPRPCSFCRKSLSEPCYYNKTDRVVYQFCSPSCWTKFQHTSPEGGIHLNCHYCHNLFTGKPEILDWQDKMYQFCCKDCCEDFKRLRGVVSQCEHCKQEKLLHEKIRFSGVEKNFCSEGCVLLYKQDFTKNLGLCCITCTYCSQTCQRAVTEQLEGSTWDFCSEDCKSKYLLWYFKAARCHACKRQGKLLETIHWRGQIKHFCNQQCLLRFYNQQNQPNLDTQKGPESLLNSQSSETKPPASSHQKAETNTLSSKTSSAHMSPAAPPPPPPPVPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGCQTEADWKPQVIVLPIPVPIFVPVPMHMYCQKVPVPFSMPVPVPVPMFLPTTLESADKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQSAEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLYINPSVDFLFDCGLVGPEDVSTEQELPRAVRKGQKRLVLSESCSRDSMSSQPSCTALNYSYGVNAWKSWVQAKYAGGETSKGEELRFGPKPIRIKEDILACTAAELNYGLAQFVKEITRPNGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSGWQPTVLPNNTVFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTARGVTKMVSIRYCAPAKQKKGRDGSTGKRKREEEMPMLEQRENKMNPLRCPVKFYEFYLSKCPESMRNRNDIFYLQPERSCIAESPLWYSVIPMDRSMLESMLNRILVVREIYEEHSRLSSVEDDMD
SIO_010081: ZMYM3
subclass of: SO_0000673
so part of: ZMYM3
location: join(741934..742816,743487..743527,743932..744001,744803..745091,745478..745655,746082..746294,746880..747030,747629..747744,749762..749848,750160..750310,750892..751064,751488..751653,755387..755445,755973..756141,756739..756854,757027..757201,757740..757886,758705..758808,759203..759371,759491..759642,760067..760181,761126..761380,761469..761586,761953..762151)
location: region:741934-762151:1
so has part: feature:741934-742816:1:exon
so has part: feature:743487-743527:1:exon
so has part: feature:743932-744001:1:exon
so has part: feature:744803-745091:1:exon
so has part: feature:745478-745655:1:exon
so has part: feature:746082-746294:1:exon
so has part: feature:746880-747030:1:exon
so has part: feature:747629-747744:1:exon
so has part: feature:749762-749848:1:exon
so has part: feature:750160-750310:1:exon
so has part: feature:750892-751064:1:exon
so has part: feature:751488-751653:1:exon
so has part: feature:755387-755445:1:exon
so has part: feature:755973-756141:1:exon
so has part: feature:756739-756854:1:exon
so has part: feature:757027-757201:1:exon
so has part: feature:757740-757886:1:exon
so has part: feature:758705-758808:1:exon
so has part: feature:759203-759371:1:exon
so has part: feature:759491-759642:1:exon
so has part: feature:760067-760181:1:exon
so has part: feature:761126-761380:1:exon
so has part: feature:761469-761586:1:exon
so has part: feature:761953-762151:1:exon

XP_003205674.1
type: Protein
SIO_000068: ncbiprotein

position:762151:1
position: 762151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:741934-742816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743487-743527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743932-744001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744803-745091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745478-745655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:746082-746294:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:746880-747030:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747629-747744:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:749762-749848:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:750160-750310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:750892-751064:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:751488-751653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:755387-755445:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:755973-756141:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:756739-756854:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:757027-757201:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:757740-757886:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:758705-758808:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:759203-759371:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:759491-759642:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:760067-760181:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:761126-761380:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:761469-761586:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:761953-762151:1:exon

ZMYM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ZMYM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 3 isoform X2
translation: MDSSEISGSLDPLSLPDKPLIGDLPADMEFGEDLLGSQTASTQEAAVLRPPDWDQSKQMTADGDLGLQEKGDSLSEQNKSSDLSLDKPGAVLDVLEKPDVLDDLDGTAGSVENKSEDLDELCKAQPSQDGEGGMGDSSAVSKEALVPETQKEGEDAPKTNSGDLKEDGAAAIPALSDENGPESPPQPAPDSGDLSSAPAIEETTAQPSSPPVAPPQLSLKQPKKTRLKAPRKSSPVQREGLPGDAEGELRPDSSMAALPSEPAQEKKAEEWNDDGNNSLRESTGPRAEEAALPAEGLSRKGSVPQTEKEKRSERARRSESARPETVNSAESIPVSDEDSDAMVDDPNDEDFVPFRTRRSTRMSLRTQVAQRAARSVAKMTCANCRTPLQKGQTAYQRKGLPQLFCSSSCLTTFSRRPHGKKICTFCKKEIWNTRDSVVAQIGSGGSFHEFCTSVCLSLYEAQQQRPAPQFADPTDTIRCSVCHKPGEVQHEVSNGNVVHRICSDACFTKFRATKGLKTNCCDYCGLYIYNKGMPVEYLFHEGQQKRFCNSSCLNSYKKKNTRVYPCMWCKTLCKNFDMLPNVDRSGKMGLFCSICCTTSHKVKQSGLVGPPRPCSFCRKSLSEPCYYNKTDRVVYQFCSPSCWTKFQHTSPEGGIHLNCHYCHNLFTGKPEILDWQDKMYQFCCKDCCEDFKRLRGVVSQCEHCKQEKLLHEKIRFSGVEKNFCSEGQSSETKPPASSHQKAETNTLSSKTSSAHMSPAAPPPPPPPVPATPRKNKAAMCKPLMQNRGVSCKVEMKSKGCQTEADWKPQVIVLPIPVPIFVPVPMHMYCQKVPVPFSMPVPVPVPMFLPTTLESADKIVETIEELKVKIPSNPLEADILAMAEMIAEAEELDKASSDLCDLVSNQSAEGLLEDCDLFGPARDDVLAMAVKMANVLDEPGQDLEADFPKNPLYINPSVDFLFDCGLVGPEDVSTEQELPRAVRKGQKRLVLSESCSRDSMSSQPSCTALNYSYGVNAWKSWVQAKYAGGETSKGEELRFGPKPIRIKEDILACTAAELNYGLAQFVKEITRPNGERYEPDSIYYLCLGIQQYLLENNRMVNIFTDLYYLTFVQELNKSLSGWQPTVLPNNTVFSRVEEEHLWECKQLGVYSPFVLLNTLMFFNTKFFGLQTAEEHMQLSFTNVVRQSRKCTTARGVTKMVSIRYCAPAKQKKGRDGSTGKRKREEEMPMLEQRENKMNPLRCPVKFYEFYLSKCPESMRNRNDIFYLQPERSCIAESPLWYSVIPMDRSMLESMLNRILVVREIYEEHSRLSSVEDDMD
SIO_010081: ZMYM3
subclass of: SO_0000673
so part of: ZMYM3
location: join(741934..742816,743487..743527,743932..744001,744803..745091,745478..745655,746082..746294,746880..747030,747629..747744,749762..749848,750160..750310,755387..755445,755973..756141,756739..756854,757027..757201,757740..757886,758705..758808,759203..759371,759491..759642,760067..760181,761126..761380,761469..761586,761953..762151)
location: region:741934-762151:1
so has part: feature:741934-742816:1:exon
so has part: feature:743487-743527:1:exon
so has part: feature:743932-744001:1:exon
so has part: feature:744803-745091:1:exon
so has part: feature:745478-745655:1:exon
so has part: feature:746082-746294:1:exon
so has part: feature:746880-747030:1:exon
so has part: feature:747629-747744:1:exon
so has part: feature:749762-749848:1:exon
so has part: feature:750160-750310:1:exon
so has part: feature:755387-755445:1:exon
so has part: feature:755973-756141:1:exon
so has part: feature:756739-756854:1:exon
so has part: feature:757027-757201:1:exon
so has part: feature:757740-757886:1:exon
so has part: feature:758705-758808:1:exon
so has part: feature:759203-759371:1:exon
so has part: feature:759491-759642:1:exon
so has part: feature:760067-760181:1:exon
so has part: feature:761126-761380:1:exon
so has part: feature:761469-761586:1:exon
so has part: feature:761953-762151:1:exon

XP_010713297.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:741934-742816:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:743487-743527:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743932-744001:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:744803-745091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745478-745655:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:746082-746294:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:746880-747030:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:747629-747744:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:749762-749848:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:750160-750310:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:755387-755445:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:755973-756141:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:756739-756854:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:757027-757201:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:757740-757886:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:758705-758808:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:759203-759371:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:759491-759642:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:760067-760181:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:761126-761380:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:761469-761586:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:761953-762151:1:exon

LOC100551358
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100551358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(763770..765533)
location: region:763770-765533:-1
so has part: feature:763770-765533:-1:exon
subclass of: SO_0000010

100551358
type: Gene
SIO_000068: ncbigene

position:763770:-1
position: 763770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765533:-1
position: 765533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:763770-765533:-1:exon

LOC100551358
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100551358
product: gap junction alpha-3 protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010714996.2
SIO_010081: LOC100551358
subclass of: SO_0000673
so part of: LOC100551358
location: complement(763770..765533)
location: region:763770-765533:-1
so has part: feature:763770-765533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:763770-765533:-1:exon

LOC100551358
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100551358
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction alpha-3 protein-like
translation: MPTPLLGLLLLEAPHTGFGGLCARSGGSPVQVPACSSRGWGCGRARVRVSGTWLSCSAMGDWSLLGRLLENAQEHSTVVGKVWLTVLFVFRILVLGAAAERVWGDELAGFSCDTQQPGCQNACYDSTFPISHLRFWVLQIIFVSTPSLVYLGHILHLVHLEEKAQQQAAARGGSRARRQQGKARIPARDTQGRVHMRGAILRTYVCSVVFKALFEMGFIAGQYALYGLELKPLYTCSRWPCPNTVNCYISRPTEKTIFILFMLGVACVSLLLNLVEIYHLGLTKCRQRPGPRSRILPGPGGLAGSHSARFTLPGGGNPMDASGPHLAPLGKAGAWLGVASGSRGKVRAADLAV
SIO_010081: LOC100551358
subclass of: SO_0000673
so part of: LOC100551358
location: complement(764010..765071)
location: region:764010-765071:-1
so has part: feature:764010-765071:-1:exon

XP_010713298.1
type: Protein
SIO_000068: ncbiprotein

position:764010:-1
position: 764010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765071:-1
position: 765071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764010-765071:-1:exon

GJB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GJB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(765631..767417)
location: region:765631-767417:-1
so has part: feature:765631-767417:-1:exon
subclass of: SO_0000010

100547367
type: Gene
SIO_000068: ncbigene

position:765631:-1
position: 765631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767417:-1
position: 767417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765631-767417:-1:exon

GJB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GJB1
product: gap junction protein beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 131 samples with support for all annotated introns
transcript id: XM_003205603.3
SIO_010081: GJB1
subclass of: SO_0000673
so part of: GJB1
location: complement(join(765631..766619,767276..767417))
location: region:765631-767417:-1
so has part: feature:767276-767417:-1:exon
so has part: feature:765631-766619:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:767276-767417:-1:exon

position:767276:-1
position: 767276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765631-766619:-1:exon

position:766619:-1
position: 766619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GJB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-1 protein
translation: MNWAGLYAVLSGVNRHSTAIGRIWLSVIFIFRIMVLVVAAESVWGDEKSAFTCNTQQPGCNSVCYDHFFPISHIRLWALQLILVTTPALLVAMHVAYQQHQEKKLLMMTGHGDAKHLEEVKKHKMRIAGSLWWTYVCSVVFRLLFEAVFMYLFYMIYPGYQMVRLVKCEAYPCPNTVDCFVSRPTEKTIFTVFMLVTSSICIVLNMAELVYLVVRACARRSRHNSNPSSGKSSFYGHKLSSEYKQNEINQLLTEQDGSLKDMLRRNPSLQEKGDRCSAC
SIO_010081: GJB1
subclass of: SO_0000673
so part of: GJB1
location: complement(765768..766607)
location: region:765768-766607:-1
so has part: feature:765768-766607:-1:exon

XP_003205651.1
type: Protein
SIO_000068: ncbiprotein

position:765768:-1
position: 765768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766607:-1
position: 766607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765768-766607:-1:exon

NONO
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: NONO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(771616..785338)
location: region:771616-785338:-1
so has part: feature:771616-785338:-1:exon
subclass of: SO_0000010

100538520
type: Gene
SIO_000068: ncbigene

position:771616:-1
position: 771616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785338:-1
position: 785338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771616-785338:-1:exon

NONO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NONO
product: non-POU domain containing octamer binding, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010714997.3
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: complement(join(771616..772650,775142..775251,775899..775941,776895..776997,777758..777842,777990..778186,779157..779252,781168..781469,782445..782665,785212..785338))
location: region:771616-785338:-1
so has part: feature:785212-785338:-1:exon
so has part: feature:782445-782665:-1:exon
so has part: feature:781168-781469:-1:exon
so has part: feature:779157-779252:-1:exon
so has part: feature:777990-778186:-1:exon
so has part: feature:777758-777842:-1:exon
so has part: feature:776895-776997:-1:exon
so has part: feature:775899-775941:-1:exon
so has part: feature:775142-775251:-1:exon
so has part: feature:771616-772650:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:785212-785338:-1:exon

position:785212:-1
position: 785212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:782445-782665:-1:exon

position:782445:-1
position: 782445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782665:-1
position: 782665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:781168-781469:-1:exon

position:781168:-1
position: 781168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781469:-1
position: 781469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:779157-779252:-1:exon

position:779157:-1
position: 779157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779252:-1
position: 779252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:777990-778186:-1:exon

position:777990:-1
position: 777990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778186:-1
position: 778186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:777758-777842:-1:exon

position:777758:-1
position: 777758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:777842:-1
position: 777842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:776895-776997:-1:exon

position:776895:-1
position: 776895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776997:-1
position: 776997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:775899-775941:-1:exon

position:775899:-1
position: 775899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775941:-1
position: 775941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:775142-775251:-1:exon

position:775142:-1
position: 775142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775251:-1
position: 775251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:771616-772650:-1:exon

position:772650:-1
position: 772650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NONO
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: NONO
product: non-POU domain containing octamer binding, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010714998.3
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: complement(join(772513..772650,775142..775251,775899..775941,776895..776997,777758..777842,777990..778186,779157..779252,781168..781469,782445..782638,785212..785338))
location: region:772513-785338:-1
so has part: feature:785212-785338:-1:exon
so has part: feature:782445-782638:-1:exon
so has part: feature:781168-781469:-1:exon
so has part: feature:779157-779252:-1:exon
so has part: feature:777990-778186:-1:exon
so has part: feature:777758-777842:-1:exon
so has part: feature:776895-776997:-1:exon
so has part: feature:775899-775941:-1:exon
so has part: feature:775142-775251:-1:exon
so has part: feature:772513-772650:-1:exon

position:772513:-1
position: 772513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785212-785338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782445-782638:-1:exon

position:782638:-1
position: 782638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:781168-781469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779157-779252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777990-778186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777758-777842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:776895-776997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775899-775941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:775142-775251:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:772513-772650:-1:exon

NONO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NONO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-POU domain-containing octamer-binding protein isoform X2
translation: MQGNKGFNMDKQNHAPRKQHQHQHQQHPPPSIPANGQQANSQNEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQFVSNELLEEAFSVFGQVERAVVIVDDRGRSSGKGIVEFSGKPAARKALDRCSDGSFLLTTFPRPVTVEPMDQYDDEEGLPEKLVIKNQQYHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQEQVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLEIRQEEERRRREEEMRRQQEEMMRRQQEGFKGNFADAREPPDMRMGQMGMGGTIGMNNRGAMGGTNVPAAAPPAAGPGAMIPDGAMGMTPPPPADRFGQGSTMEGLGAMGGNPPAFNRGNPGGEFGPNKRRRY
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: complement(join(772513..772650,775142..775251,775899..775941,776895..776997,777758..777842,777990..778186,779157..779252,781168..781469,782445..782638,785212..785338))
location: region:772513-785338:-1
so has part: feature:785212-785338:-1:exon
so has part: feature:782445-782638:-1:exon
so has part: feature:781168-781469:-1:exon
so has part: feature:779157-779252:-1:exon
so has part: feature:777990-778186:-1:exon
so has part: feature:777758-777842:-1:exon
so has part: feature:776895-776997:-1:exon
so has part: feature:775899-775941:-1:exon
so has part: feature:775142-775251:-1:exon
so has part: feature:772513-772650:-1:exon

XP_010713300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:785212-785338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782445-782638:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781168-781469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779157-779252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777990-778186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777758-777842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:776895-776997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775899-775941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:775142-775251:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:772513-772650:-1:exon

NONO
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: NONO
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: non-POU domain-containing octamer-binding protein isoform X1
translation: MQGNKGFNMDKQNHAPRKQHQHQHQQHPPPSIPANGQQANSQKQLCTLFPSDEGLTIDLKNFRKPGEKTFTQRSRLFVGNLPPDITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRGKQLRVRFACHSASLTVRNLPQFVSNELLEEAFSVFGQVERAVVIVDDRGRSSGKGIVEFSGKPAARKALDRCSDGSFLLTTFPRPVTVEPMDQYDDEEGLPEKLVIKNQQYHKEREQPPRFAQPGSFEYEYAMRWKALIEMEKQQQEQVDRNIKEAREKLEMEMEAARHEHQVMLMRQDLMRRQEELRRMEELHNQEVQKRKQLEIRQEEERRRREEEMRRQQEEMMRRQQEGFKGNFADAREPPDMRMGQMGMGGTIGMNNRGAMGGTNVPAAAPPAAGPGAMIPDGAMGMTPPPPADRFGQGSTMEGLGAMGGNPPAFNRGNPGGEFGPNKRRRY
SIO_010081: NONO
subclass of: SO_0000673
so part of: NONO
location: complement(join(772513..772650,775142..775251,775899..775941,776895..776997,777758..777842,777990..778186,779157..779252,781168..781469,782445..782665,785212..785338))
location: region:772513-785338:-1
so has part: feature:785212-785338:-1:exon
so has part: feature:782445-782665:-1:exon
so has part: feature:781168-781469:-1:exon
so has part: feature:779157-779252:-1:exon
so has part: feature:777990-778186:-1:exon
so has part: feature:777758-777842:-1:exon
so has part: feature:776895-776997:-1:exon
so has part: feature:775899-775941:-1:exon
so has part: feature:775142-775251:-1:exon
so has part: feature:772513-772650:-1:exon

XP_010713299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:785212-785338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:782445-782665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:781168-781469:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779157-779252:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:777990-778186:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:777758-777842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:776895-776997:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:775899-775941:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:775142-775251:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:772513-772650:-1:exon

ITGB1BP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ITGB1BP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(785524..791450)
location: region:785524-791450:-1
so has part: feature:785524-791450:-1:exon
subclass of: SO_0000010

100547522
type: Gene
SIO_000068: ncbigene

position:785524:-1
position: 785524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791450:-1
position: 791450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785524-791450:-1:exon

ITGB1BP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: ITGB1BP2
product: integrin subunit beta 1 binding protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_003205604.4
SIO_010081: ITGB1BP2
subclass of: SO_0000673
so part of: ITGB1BP2
location: complement(join(785524..785874,786978..787040,787382..787501,788784..788886,789004..789074,789807..789865,789979..790091,790238..790383,790771..790827,790913..790962,791162..791450))
location: region:785524-791450:-1
so has part: feature:791162-791450:-1:exon
so has part: feature:790913-790962:-1:exon
so has part: feature:790771-790827:-1:exon
so has part: feature:790238-790383:-1:exon
so has part: feature:789979-790091:-1:exon
so has part: feature:789807-789865:-1:exon
so has part: feature:789004-789074:-1:exon
so has part: feature:788784-788886:-1:exon
so has part: feature:787382-787501:-1:exon
so has part: feature:786978-787040:-1:exon
so has part: feature:785524-785874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:791162-791450:-1:exon

position:791162:-1
position: 791162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:790913-790962:-1:exon

position:790913:-1
position: 790913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790962:-1
position: 790962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:790771-790827:-1:exon

position:790771:-1
position: 790771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790827:-1
position: 790827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:790238-790383:-1:exon

position:790238:-1
position: 790238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790383:-1
position: 790383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:789979-790091:-1:exon

position:789979:-1
position: 789979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:790091:-1
position: 790091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:789807-789865:-1:exon

position:789807:-1
position: 789807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789865:-1
position: 789865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:789004-789074:-1:exon

position:789004:-1
position: 789004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:789074:-1
position: 789074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:788784-788886:-1:exon

position:788784:-1
position: 788784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:788886:-1
position: 788886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:787382-787501:-1:exon

position:787382:-1
position: 787382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787501:-1
position: 787501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:786978-787040:-1:exon

position:786978:-1
position: 786978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787040:-1
position: 787040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:785524-785874:-1:exon

position:785874:-1
position: 785874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ITGB1BP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ITGB1BP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrin beta-1-binding protein 2
translation: MALLCYNKGCGQRFDPEHNSEDSCLYHPGVPIFHDALKGWSCCKKRTTDFSEFLSIKGCTKGFHSKEKPPEPSQEETSDKPKAKPMAEIIVQGPKSAEKMQRERPSSDEPRQLLPIKVSRSLEQALEKLSLSPNNKEPRGDCAGEAAAQVRAGTTCKNSACKAIYQGPESNTEVCTFHPGVPVFHEGMKYWSCCGIRTTDFSAFLEQPGCSTGRHCWMGKADKKAVSCRQDWHQTSSQVVVTIYGKNPLPTLSSVKANRTVLEVHVIFEGNKIFQAELDLWGVIETEKSFVSMVPSKVEITLCKAGPGAWARLEHPQSKACARDEPEKAAASAEEPEEDSDDSLSWSEEEDEEMEAANSAALQRGFGESSAGADGALSSP
SIO_010081: ITGB1BP2
subclass of: SO_0000673
so part of: ITGB1BP2
location: complement(join(785578..785874,786978..787040,787382..787501,788784..788886,789004..789074,789807..789865,789979..790091,790238..790383,790771..790827,790913..790962,791162..791225))
location: region:785578-791225:-1
so has part: feature:791162-791225:-1:exon
so has part: feature:790913-790962:-1:exon
so has part: feature:790771-790827:-1:exon
so has part: feature:790238-790383:-1:exon
so has part: feature:789979-790091:-1:exon
so has part: feature:789807-789865:-1:exon
so has part: feature:789004-789074:-1:exon
so has part: feature:788784-788886:-1:exon
so has part: feature:787382-787501:-1:exon
so has part: feature:786978-787040:-1:exon
so has part: feature:785578-785874:-1:exon

XP_003205652.2
type: Protein
SIO_000068: ncbiprotein

position:785578:-1
position: 785578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:791225:-1
position: 791225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791162-791225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790913-790962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790771-790827:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:790238-790383:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:789979-790091:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:789807-789865:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:789004-789074:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:788784-788886:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:787382-787501:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:786978-787040:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:785578-785874:-1:exon

LOC100547676
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100547676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(793291..804734)
location: region:793291-804734:-1
so has part: feature:793291-804734:-1:exon
subclass of: SO_0000010

100547676
type: Gene
SIO_000068: ncbigene

position:793291:-1
position: 793291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804734:-1
position: 804734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793291-804734:-1:exon

LOC100547676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100547676
product: rho-related GTP-binding protein RhoG-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 195 samples with support for all annotated introns
transcript id: XM_010715000.2
SIO_010081: LOC100547676
subclass of: SO_0000673
so part of: LOC100547676
location: complement(join(793291..797542,804483..804734))
location: region:793291-804734:-1
so has part: feature:804483-804734:-1:exon
so has part: feature:793291-797542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804483-804734:-1:exon

position:804483:-1
position: 804483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:793291-797542:-1:exon

position:797542:-1
position: 797542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100547676
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100547676
product: rho-related GTP-binding protein RhoG-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 185 samples with support for all annotated introns
transcript id: XM_010714999.2
SIO_010081: LOC100547676
subclass of: SO_0000673
so part of: LOC100547676
location: complement(join(793291..797542,804454..804734))
location: region:793291-804734:-1
so has part: feature:804454-804734:-1:exon
so has part: feature:793291-797542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:804454-804734:-1:exon

position:804454:-1
position: 804454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:793291-797542:-1:exon

LOC100547676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100547676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoG-like
translation: MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMTVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIGSPSSYANVRHKWHPEVSHHCPNVPILLVGTKRDLRNDLETVKKLKEQSLAPTTPQQGTSLAKQIGAVKYLECSALNQEGVREVFAEAVRAVLYPVTKKNTRKCVLL
SIO_010081: LOC100547676
subclass of: SO_0000673
so part of: LOC100547676
location: complement(796946..797521)
location: region:796946-797521:-1
so has part: feature:796946-797521:-1:exon

XP_010713301.1
type: Protein
SIO_000068: ncbiprotein

position:796946:-1
position: 796946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:797521:-1
position: 797521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:796946-797521:-1:exon

LOC100547676
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100547676
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho-related GTP-binding protein RhoG-like
translation: MQTIKCVVVGDGAVGKTCLLISYTTNAFPEEYIPTVFDNYSAQMTVDGRTVSLNLWDTAGQEEYDRLRTLSYPQTNVFVICFSIGSPSSYANVRHKWHPEVSHHCPNVPILLVGTKRDLRNDLETVKKLKEQSLAPTTPQQGTSLAKQIGAVKYLECSALNQEGVREVFAEAVRAVLYPVTKKNTRKCVLL
SIO_010081: LOC100547676
subclass of: SO_0000673
so part of: LOC100547676
location: complement(796946..797521)
location: region:796946-797521:-1
so has part: feature:796946-797521:-1:exon

XP_010713302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:796946-797521:-1:exon

TAF1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(805142..832309)
location: region:805142-832309:-1
so has part: feature:805142-832309:-1:exon
subclass of: SO_0000010

100538674
type: Gene
SIO_000068: ncbigene

position:805142:-1
position: 805142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832309:-1
position: 832309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805142-832309:-1:exon

TAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TAF1
product: TATA-box binding protein associated factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 200 samples with support for all annotated introns
transcript id: XM_010715003.3
SIO_010081: TAF1
subclass of: SO_0000673
so part of: TAF1
location: complement(join(805142..805712,806751..806928,807706..807856,808133..808231,811616..811732,811812..811879,812336..812420,812496..812588,813370..813492,813856..813923,815041..815218,815901..815999,816201..816309,816501..816712,816881..817046,818104..818311,818825..819066,819710..819885,820062..820181,820343..820492,821154..821234,821594..821724,821853..821994,822289..822489,823634..823738,823823..823996,824095..824268,824512..824619,824726..824853,825885..826052,826422..826538,827422..827623,827764..827982,828405..828623,829843..829916,830524..830643,831399..831515,832170..832309))
location: region:805142-832309:-1
so has part: feature:832170-832309:-1:exon
so has part: feature:831399-831515:-1:exon
so has part: feature:830524-830643:-1:exon
so has part: feature:829843-829916:-1:exon
so has part: feature:828405-828623:-1:exon
so has part: feature:827764-827982:-1:exon
so has part: feature:827422-827623:-1:exon
so has part: feature:826422-826538:-1:exon
so has part: feature:825885-826052:-1:exon
so has part: feature:824726-824853:-1:exon
so has part: feature:824512-824619:-1:exon
so has part: feature:824095-824268:-1:exon
so has part: feature:823823-823996:-1:exon
so has part: feature:823634-823738:-1:exon
so has part: feature:822289-822489:-1:exon
so has part: feature:821853-821994:-1:exon
so has part: feature:821594-821724:-1:exon
so has part: feature:821154-821234:-1:exon
so has part: feature:820343-820492:-1:exon
so has part: feature:820062-820181:-1:exon
so has part: feature:819710-819885:-1:exon
so has part: feature:818825-819066:-1:exon
so has part: feature:818104-818311:-1:exon
so has part: feature:816881-817046:-1:exon
so has part: feature:816501-816712:-1:exon
so has part: feature:816201-816309:-1:exon
so has part: feature:815901-815999:-1:exon
so has part: feature:815041-815218:-1:exon
so has part: feature:813856-813923:-1:exon
so has part: feature:813370-813492:-1:exon
so has part: feature:812496-812588:-1:exon
so has part: feature:812336-812420:-1:exon
so has part: feature:811812-811879:-1:exon
so has part: feature:811616-811732:-1:exon
so has part: feature:808133-808231:-1:exon
so has part: feature:807706-807856:-1:exon
so has part: feature:806751-806928:-1:exon
so has part: feature:805142-805712:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:832170-832309:-1:exon

position:832170:-1
position: 832170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:831399-831515:-1:exon

position:831399:-1
position: 831399
reference: sequence
type: ReverseStrandPosition
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position:831515:-1
position: 831515
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:830524-830643:-1:exon

position:830524:-1
position: 830524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:829843-829916:-1:exon

position:829843:-1
position: 829843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:828405-828623:-1:exon

position:828405:-1
position: 828405
reference: sequence
type: ReverseStrandPosition
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position:828623:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:827764-827982:-1:exon

position:827764:-1
position: 827764
reference: sequence
type: ReverseStrandPosition
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position:827982:-1
position: 827982
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:827422-827623:-1:exon

position:827422:-1
position: 827422
reference: sequence
type: ReverseStrandPosition
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position:827623:-1
position: 827623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:826422-826538:-1:exon

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position: 826422
reference: sequence
type: ReverseStrandPosition
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position:826538:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:825885-826052:-1:exon

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position: 825885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826052:-1
position: 826052
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:824726-824853:-1:exon

position:824726:-1
position: 824726
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:824512-824619:-1:exon

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position: 824512
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:824095-824268:-1:exon

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position: 824095
reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:823823-823996:-1:exon

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position: 823823
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:823634-823738:-1:exon

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position: 823634
reference: sequence
type: ReverseStrandPosition
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position:823738:-1
position: 823738
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urn:…
SIO_000300: 15
SIO_000628: feature:822289-822489:-1:exon

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position: 822289
reference: sequence
type: ReverseStrandPosition
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position:822489:-1
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urn:…
SIO_000300: 16
SIO_000628: feature:821853-821994:-1:exon

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position: 821853
reference: sequence
type: ReverseStrandPosition
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position:821994:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:821594-821724:-1:exon

position:821594:-1
position: 821594
reference: sequence
type: ReverseStrandPosition
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position:821724:-1
position: 821724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:821154-821234:-1:exon

position:821154:-1
position: 821154
reference: sequence
type: ReverseStrandPosition
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position:821234:-1
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urn:…
SIO_000300: 19
SIO_000628: feature:820343-820492:-1:exon

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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:820062-820181:-1:exon

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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:819710-819885:-1:exon

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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:818825-819066:-1:exon

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position: 818825
reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:818104-818311:-1:exon

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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:816881-817046:-1:exon

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urn:…
SIO_000300: 25
SIO_000628: feature:816501-816712:-1:exon

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urn:…
SIO_000300: 26
SIO_000628: feature:816201-816309:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:815901-815999:-1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:815041-815218:-1:exon

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urn:…
SIO_000300: 29
SIO_000628: feature:813856-813923:-1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:813370-813492:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:812496-812588:-1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:812336-812420:-1:exon

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reference: sequence
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urn:…
SIO_000300: 33
SIO_000628: feature:811812-811879:-1:exon

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reference: sequence
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urn:…
SIO_000300: 34
SIO_000628: feature:811616-811732:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:808133-808231:-1:exon

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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:807706-807856:-1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:806751-806928:-1:exon

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reference: sequence
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urn:…
SIO_000300: 38
SIO_000628: feature:805142-805712:-1:exon

position:805712:-1
position: 805712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TAF1
product: TATA-box binding protein associated factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 192 samples with support for all annotated introns
transcript id: XM_031554619.1
SIO_010081: TAF1
subclass of: SO_0000673
so part of: TAF1
location: complement(join(805496..805712,806751..806928,807706..807856,808133..808231,811616..811732,811812..811879,812336..812420,812496..812588,813370..813492,813856..813923,815041..815218,815901..815999,816201..816309,816501..816712,816881..817046,818104..818311,818825..819066,819710..819885,820062..820181,820343..820492,821154..821234,821594..821724,821853..821994,822289..822489,823634..823738,823823..823996,824095..824268,824512..824619,824726..824853,825885..826052,826464..826538,827422..827623,827764..827982,828405..828623,829843..829916,830524..830643,831399..831515,832170..832309))
location: region:805496-832309:-1
so has part: feature:832170-832309:-1:exon
so has part: feature:831399-831515:-1:exon
so has part: feature:830524-830643:-1:exon
so has part: feature:829843-829916:-1:exon
so has part: feature:828405-828623:-1:exon
so has part: feature:827764-827982:-1:exon
so has part: feature:827422-827623:-1:exon
so has part: feature:826464-826538:-1:exon
so has part: feature:825885-826052:-1:exon
so has part: feature:824726-824853:-1:exon
so has part: feature:824512-824619:-1:exon
so has part: feature:824095-824268:-1:exon
so has part: feature:823823-823996:-1:exon
so has part: feature:823634-823738:-1:exon
so has part: feature:822289-822489:-1:exon
so has part: feature:821853-821994:-1:exon
so has part: feature:821594-821724:-1:exon
so has part: feature:821154-821234:-1:exon
so has part: feature:820343-820492:-1:exon
so has part: feature:820062-820181:-1:exon
so has part: feature:819710-819885:-1:exon
so has part: feature:818825-819066:-1:exon
so has part: feature:818104-818311:-1:exon
so has part: feature:816881-817046:-1:exon
so has part: feature:816501-816712:-1:exon
so has part: feature:816201-816309:-1:exon
so has part: feature:815901-815999:-1:exon
so has part: feature:815041-815218:-1:exon
so has part: feature:813856-813923:-1:exon
so has part: feature:813370-813492:-1:exon
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so has part: feature:811812-811879:-1:exon
so has part: feature:811616-811732:-1:exon
so has part: feature:808133-808231:-1:exon
so has part: feature:807706-807856:-1:exon
so has part: feature:806751-806928:-1:exon
so has part: feature:805496-805712:-1:exon

position:805496:-1
position: 805496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832170-832309:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:831399-831515:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:830524-830643:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:829843-829916:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:828405-828623:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:827764-827982:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:827422-827623:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:826464-826538:-1:exon

position:826464:-1
position: 826464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:825885-826052:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824726-824853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824512-824619:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:824095-824268:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:823823-823996:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:823634-823738:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:822289-822489:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:821853-821994:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:821594-821724:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:821154-821234:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:820343-820492:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:820062-820181:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:819710-819885:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:818825-819066:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:818104-818311:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:816881-817046:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:816501-816712:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:816201-816309:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:815901-815999:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:815041-815218:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:813856-813923:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:813370-813492:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:812496-812588:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:812336-812420:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:811812-811879:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:811616-811732:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:808133-808231:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:807706-807856:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:806751-806928:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:805496-805712:-1:exon

TAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 1 isoform X2
translation: MGSLQPIGRQDEDEDDYDADCEDIDSKLMPPPPPPPVPGKKEDEKDAAATGVTQRDASKLLPSVTELFPEFRPGKVLRFLRLFGPGKNIPSVWRSARRKRKKKHRELAQEVQIQEGEVVAESGTEGKSPWEYEFAAPPPPEQCLSDDEITMMAPVESKFSQSAGDTDKVTDTKPKVAEWRYGPAQLWYDMLGIPEDGSGFDYGFKLKEKTEQEVKGQTDEKDAELVDEKDDLLADEHFLMVTQLQWEDDVIWNGEDVKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNPPLPLTQKPGVAGVLVSLDEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAMETYLDPPVLTLDPNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFHRPPLKKYSFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYVRELVDIFVVGQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGEDSGNDKDRGKKDRRDKKGLSSGASANSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPSVIDAYCRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKLKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILEGIINDMRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLETICKNISKHKYQNRETFLDDVNLVLANSIKYNGPDSQYTKTAQEIVNICYQTLAEYDEHLTQLERDISTAKEAALEEADLESLDPMTPGPYTPQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDADGDLADEEEGSTQQPQASVLYEDLLMSDGEDDDDGSDEEGDNPFSSIQLSESGSDSDVETNAVRPKQPHVIQENTRMGMDNEESMMSYEGDGGETSQVMEDSNISYGSYEEPDPKSNTRDTSFSSIGGYEISEEEEEEEEQRCGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
SIO_010081: TAF1
subclass of: SO_0000673
so part of: TAF1
location: complement(join(805496..805712,806751..806928,807706..807856,808133..808231,811616..811732,811812..811879,812336..812420,812496..812588,813370..813492,813856..813923,815041..815218,815901..815999,816201..816309,816501..816712,816881..817046,818104..818311,818825..819066,819710..819885,820062..820181,820343..820492,821154..821234,821594..821724,821853..821994,822289..822489,823634..823738,823823..823996,824095..824268,824512..824619,824726..824853,825885..826052,826464..826538,827422..827623,827764..827982,828405..828623,829843..829916,830524..830643,831399..831429))
location: region:805496-831429:-1
so has part: feature:831399-831429:-1:exon
so has part: feature:830524-830643:-1:exon
so has part: feature:829843-829916:-1:exon
so has part: feature:828405-828623:-1:exon
so has part: feature:827764-827982:-1:exon
so has part: feature:827422-827623:-1:exon
so has part: feature:826464-826538:-1:exon
so has part: feature:825885-826052:-1:exon
so has part: feature:824726-824853:-1:exon
so has part: feature:824512-824619:-1:exon
so has part: feature:824095-824268:-1:exon
so has part: feature:823823-823996:-1:exon
so has part: feature:823634-823738:-1:exon
so has part: feature:822289-822489:-1:exon
so has part: feature:821853-821994:-1:exon
so has part: feature:821594-821724:-1:exon
so has part: feature:821154-821234:-1:exon
so has part: feature:820343-820492:-1:exon
so has part: feature:820062-820181:-1:exon
so has part: feature:819710-819885:-1:exon
so has part: feature:818825-819066:-1:exon
so has part: feature:818104-818311:-1:exon
so has part: feature:816881-817046:-1:exon
so has part: feature:816501-816712:-1:exon
so has part: feature:816201-816309:-1:exon
so has part: feature:815901-815999:-1:exon
so has part: feature:815041-815218:-1:exon
so has part: feature:813856-813923:-1:exon
so has part: feature:813370-813492:-1:exon
so has part: feature:812496-812588:-1:exon
so has part: feature:812336-812420:-1:exon
so has part: feature:811812-811879:-1:exon
so has part: feature:811616-811732:-1:exon
so has part: feature:808133-808231:-1:exon
so has part: feature:807706-807856:-1:exon
so has part: feature:806751-806928:-1:exon
so has part: feature:805496-805712:-1:exon

XP_031410479.1
type: Protein
SIO_000068: ncbiprotein

position:831429:-1
position: 831429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:831399-831429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830524-830643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829843-829916:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828405-828623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:827764-827982:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:827422-827623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:826464-826538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825885-826052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824726-824853:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824512-824619:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824095-824268:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:823823-823996:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:823634-823738:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:822289-822489:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:821853-821994:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:821594-821724:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:821154-821234:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:820343-820492:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:820062-820181:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:819710-819885:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:818825-819066:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:818104-818311:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:816881-817046:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:816501-816712:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:816201-816309:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:815901-815999:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:815041-815218:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:813856-813923:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:813370-813492:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:812496-812588:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:812336-812420:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:811812-811879:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:811616-811732:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:808133-808231:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:807706-807856:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:806751-806928:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:805496-805712:-1:exon

TAF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TAF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 1 isoform X1
translation: MGSLQPIGRQDEDEDDYDADCEDIDSKLMPPPPPPPVPGKKEDEKDAAATGVTQRDASKLLPSVTELFPEFRPGKVLRFLRLFGPGKNIPSVWRSARRKRKKKHRELAQEVQIQEGEVVAESGTEGKSPWEYEFAAPPPPEQCLSDDEITMMAPVESKFSQSAGDTDKVTDTKPKVAEWRYGPAQLWYDMLGIPEDGSGFDYGFKLKEKTEQEVKGQTDEKDAELVDEKDDLLADEHFLMVTQLQWEDDVIWNGEDVKHKGTKTQRASLAGWLPSSMTRNATAYNAQQGLNRSGSLLNPPLPLTQKPGVAGVLGMAKGKEKQTPEQQVSLDEDKPWYSIFPIDNEELVYGRWEDNIIWDDQAMETYLDPPVLTLDPNDENIILEIPDEKEEMTLNSPSKENKKESSLKKSRILLGKTGVIKEEPQQNMSQPEVKDPWNLSNDEFYYPKQQGLRGTFGGNIIQHSIPAVELRQPFFPTHMGPMKLRQFHRPPLKKYSFGALSQPGPHAVQPLLKHIKKKAKMREQERQASGGGEMFFMRTPQDLTGKDGDLILAEYSEENAPLMMQVGMATKIKNYYKRKPGKDPGAPDCKYGETVYCHTSPFLGSLHPGQLLQAFENNLFRAPIYLHKMPETDFLIIRTRQGYYVRELVDIFVVGQECPLYEVPGPNSKRANTHIRDFLQVFIYRLFWKSRDRPRRIRMEDIKKAFPSHSESSIRKRLKLCADFKRTGMDSNWWVLKPDFRLPTEEEIRAMVSPEQCCAYYSMIAAEQRLKDAGYGEKSFFAPEEENEEDFQMKIDDEVRTAPWNTTRAFIAAMKGKCLLEVTGVADPTGCGEGFSYVKIPNKPTQQKDDKEPQPVKKTVTGTDADLRRLSLKNAKQLLRKFGVPEEEIKKLSRWEVIDVVRTMSTEQARSGEGPMSKFARGSRFSVAEHQERYKEECQRIFDLQNKVLESTEILSTDTDSSSAEDSDFEEMGKNIENMLQNKKTSSQLSREREEQERKELQRMLLGEDSGNDKDRGKKDRRDKKGLSSGASANSHKDDDTASVTSLNSSATGRRLKIYRTFRDEDGKEYVRCETVRKPSVIDAYCRIRTTKDEEFIRKFALFDEQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPKKLKERPDLKLKCGACGAIGHMRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIKVEGTKIVLGKQLIESADEVRRKSLVLKFPKQQLPPKKKRRVGTTVHCDYLNRPHKSIHRRRTDPMVTLSSILEGIINDMRDLPNTYPFHTPVNPKVVKDYYKIITRPMDLQTLRENVRKRQYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIANPMDLETICKNISKHKYQNRETFLDDVNLVLANSIKYNGPDSQYTKTAQEIVNICYQTLAEYDEHLTQLERDISTAKEAALEEADLESLDPMTPGPYTPQMRQGRGRLGEEDSDVDIEGFDEDDDGKPKTPAPEVEDADGDLADEEEGSTQQPQASVLYEDLLMSDGEDDDDGSDEEGDNPFSSIQLSESGSDSDVETNAVRPKQPHVIQENTRMGMDNEESMMSYEGDGGETSQVMEDSNISYGSYEEPDPKSNTRDTSFSSIGGYEISEEEEEEEEQRCGPSVLSQVHLSEDEEDSEDFHSIAGDSDLDSDE
SIO_010081: TAF1
subclass of: SO_0000673
so part of: TAF1
location: complement(join(805496..805712,806751..806928,807706..807856,808133..808231,811616..811732,811812..811879,812336..812420,812496..812588,813370..813492,813856..813923,815041..815218,815901..815999,816201..816309,816501..816712,816881..817046,818104..818311,818825..819066,819710..819885,820062..820181,820343..820492,821154..821234,821594..821724,821853..821994,822289..822489,823634..823738,823823..823996,824095..824268,824512..824619,824726..824853,825885..826052,826422..826538,827422..827623,827764..827982,828405..828623,829843..829916,830524..830643,831399..831429))
location: region:805496-831429:-1
so has part: feature:831399-831429:-1:exon
so has part: feature:830524-830643:-1:exon
so has part: feature:829843-829916:-1:exon
so has part: feature:828405-828623:-1:exon
so has part: feature:827764-827982:-1:exon
so has part: feature:827422-827623:-1:exon
so has part: feature:826422-826538:-1:exon
so has part: feature:825885-826052:-1:exon
so has part: feature:824726-824853:-1:exon
so has part: feature:824512-824619:-1:exon
so has part: feature:824095-824268:-1:exon
so has part: feature:823823-823996:-1:exon
so has part: feature:823634-823738:-1:exon
so has part: feature:822289-822489:-1:exon
so has part: feature:821853-821994:-1:exon
so has part: feature:821594-821724:-1:exon
so has part: feature:821154-821234:-1:exon
so has part: feature:820343-820492:-1:exon
so has part: feature:820062-820181:-1:exon
so has part: feature:819710-819885:-1:exon
so has part: feature:818825-819066:-1:exon
so has part: feature:818104-818311:-1:exon
so has part: feature:816881-817046:-1:exon
so has part: feature:816501-816712:-1:exon
so has part: feature:816201-816309:-1:exon
so has part: feature:815901-815999:-1:exon
so has part: feature:815041-815218:-1:exon
so has part: feature:813856-813923:-1:exon
so has part: feature:813370-813492:-1:exon
so has part: feature:812496-812588:-1:exon
so has part: feature:812336-812420:-1:exon
so has part: feature:811812-811879:-1:exon
so has part: feature:811616-811732:-1:exon
so has part: feature:808133-808231:-1:exon
so has part: feature:807706-807856:-1:exon
so has part: feature:806751-806928:-1:exon
so has part: feature:805496-805712:-1:exon

XP_010713305.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:831399-831429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:830524-830643:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:829843-829916:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:828405-828623:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:827764-827982:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:827422-827623:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:826422-826538:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825885-826052:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824726-824853:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824512-824619:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:824095-824268:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:823823-823996:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:823634-823738:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:822289-822489:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:821853-821994:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:821594-821724:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:821154-821234:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:820343-820492:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:820062-820181:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:819710-819885:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:818825-819066:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:818104-818311:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:816881-817046:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:816501-816712:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:816201-816309:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:815901-815999:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:815041-815218:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:813856-813923:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:813370-813492:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:812496-812588:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:812336-812420:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:811812-811879:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:811616-811732:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:808133-808231:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:807706-807856:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:806751-806928:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:805496-805712:-1:exon

BRCC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: BRCC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 832552..836265
location: region:832552-836265:1
so has part: feature:832552-836265:1:exon
subclass of: SO_0000010

100538985
type: Gene
SIO_000068: ncbigene

position:832552:1
position: 832552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836265:1
position: 836265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832552-836265:1:exon

BRCC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: BRCC3
product: BRCA1/BRCA2-containing complex subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010715004.3
SIO_010081: BRCC3
subclass of: SO_0000673
so part of: BRCC3
location: join(832552..832713,832847..832966,833367..833454,833814..833902,834261..834316,834896..835027,835540..835583,836076..836265)
location: region:832552-836265:1
so has part: feature:832552-832713:1:exon
so has part: feature:832847-832966:1:exon
so has part: feature:833367-833454:1:exon
so has part: feature:833814-833902:1:exon
so has part: feature:834261-834316:1:exon
so has part: feature:834896-835027:1:exon
so has part: feature:835540-835583:1:exon
so has part: feature:836076-836265:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:832552-832713:1:exon

position:832713:1
position: 832713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:832847-832966:1:exon

position:832847:1
position: 832847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:832966:1
position: 832966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:833367-833454:1:exon

position:833367:1
position: 833367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833454:1
position: 833454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:833814-833902:1:exon

position:833814:1
position: 833814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:833902:1
position: 833902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:834261-834316:1:exon

position:834261:1
position: 834261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:834316:1
position: 834316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:834896-835027:1:exon

position:834896:1
position: 834896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835027:1
position: 835027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:835540-835583:1:exon

position:835540:1
position: 835540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:835583:1
position: 835583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:836076-836265:1:exon

position:836076:1
position: 836076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BRCC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: BRCC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lys-63-specific deubiquitinase BRCC36
translation: MAVQAVHLEADAFLVCLNHALSTEKEEVMGLCIGEVDTSRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAEMTGRPMRVVGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRILYTCFQSIQAQKSSEYERFEIPIHVVPHETIGKVCLESAVELPKILCQEEQDAYRRIHSLTHLDSVTKIHNGSVFTKNLCSQMSAISGPLLQWLEDRLEQNKQRVQELQQEKEQLLEELAALD
SIO_010081: BRCC3
subclass of: SO_0000673
so part of: BRCC3
location: join(832609..832713,832847..832966,833367..833454,833814..833902,834261..834316,834896..835027,835540..835583,836076..836227)
location: region:832609-836227:1
so has part: feature:832609-832713:1:exon
so has part: feature:832847-832966:1:exon
so has part: feature:833367-833454:1:exon
so has part: feature:833814-833902:1:exon
so has part: feature:834261-834316:1:exon
so has part: feature:834896-835027:1:exon
so has part: feature:835540-835583:1:exon
so has part: feature:836076-836227:1:exon

XP_010713306.1
type: Protein
SIO_000068: ncbiprotein

position:832609:1
position: 832609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:836227:1
position: 836227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:832609-832713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:832847-832966:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:833367-833454:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:833814-833902:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:834261-834316:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:834896-835027:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:835540-835583:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:836076-836227:1:exon

GCNA
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: GCNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(837590..846034)
location: region:837590-846034:-1
so has part: feature:837590-846034:-1:exon
subclass of: SO_0000010

104912107
type: Gene
SIO_000068: ncbigene

position:837590:-1
position: 837590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846034:-1
position: 846034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:837590-846034:-1:exon

GCNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: GCNA
product: germ cell nuclear acidic peptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_010715005.2
SIO_010081: GCNA
subclass of: SO_0000673
so part of: GCNA
location: complement(join(837590..838699,839400..839604,840232..840370,842128..842272,842511..842673,842817..843257,843908..843984,844355..844406,845088..845134,845767..846034))
location: region:837590-846034:-1
so has part: feature:845767-846034:-1:exon
so has part: feature:845088-845134:-1:exon
so has part: feature:844355-844406:-1:exon
so has part: feature:843908-843984:-1:exon
so has part: feature:842817-843257:-1:exon
so has part: feature:842511-842673:-1:exon
so has part: feature:842128-842272:-1:exon
so has part: feature:840232-840370:-1:exon
so has part: feature:839400-839604:-1:exon
so has part: feature:837590-838699:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:845767-846034:-1:exon

position:845767:-1
position: 845767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845088-845134:-1:exon

position:845088:-1
position: 845088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845134:-1
position: 845134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:844355-844406:-1:exon

position:844355:-1
position: 844355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844406:-1
position: 844406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:843908-843984:-1:exon

position:843908:-1
position: 843908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843984:-1
position: 843984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:842817-843257:-1:exon

position:842817:-1
position: 842817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:843257:-1
position: 843257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:842511-842673:-1:exon

position:842511:-1
position: 842511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842673:-1
position: 842673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:842128-842272:-1:exon

position:842128:-1
position: 842128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842272:-1
position: 842272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:840232-840370:-1:exon

position:840232:-1
position: 840232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840370:-1
position: 840370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:839400-839604:-1:exon

position:839400:-1
position: 839400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839604:-1
position: 839604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:837590-838699:-1:exon

position:838699:-1
position: 838699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GCNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: GCNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acidic repeat-containing protein
translation: MRLAAVLRKRKWVLEARAFRSGMAAFSTPLGPGRRGAAGSSASHALHFSSSSDDEFEMFLAKMKTPKSVSRKEDSSLKDFINDSMDDFFLDFKTKKSTSKKAPKDLQTPKKLMTSEKENACSKELQYPEVLSDTDDSVFVDSPWQEYRRGEVKDLKESWKCLKVPPPQNGKELAARGSPGFLAGRAERSCEGSTGNKTSAMPLRQSAELKSDSSDSEFESLIERIRKRNTPRKPILSTSKTVYQPSTRENIKPRCEGAQSLDGKGVKIATSKSVSLQETPSKIMASVRIPRSESVSLSQSEKKLNVCSVPGCFLQDLSCPDSQYVKYFKKSKEELTQKLYRLYNSTIFEQKLPEKMVINWNKKMRKTAGYCVTGQTKGPEAQRYARIELSEKVCDSADRLRDTLIHEICHAATWLINGVRDGHGRFWRFYANKSAVVHPELPVVTRCHSYEIKYKFTYACVVCKATIGRHSKSLDTERFVCAFCGGRLVLSQPTPKDGTPARTNLTPFAKYVKENYGLTKREQQGLSHAEVMRKLSADFALKTRLEDSL
SIO_010081: GCNA
subclass of: SO_0000673
so part of: GCNA
location: complement(join(838447..838699,839400..839604,840232..840370,842128..842272,842511..842673,842817..843257,843908..843984,844355..844406,845088..845134,845767..845894))
location: region:838447-845894:-1
so has part: feature:845767-845894:-1:exon
so has part: feature:845088-845134:-1:exon
so has part: feature:844355-844406:-1:exon
so has part: feature:843908-843984:-1:exon
so has part: feature:842817-843257:-1:exon
so has part: feature:842511-842673:-1:exon
so has part: feature:842128-842272:-1:exon
so has part: feature:840232-840370:-1:exon
so has part: feature:839400-839604:-1:exon
so has part: feature:838447-838699:-1:exon

XP_010713307.2
type: Protein
SIO_000068: ncbiprotein

position:838447:-1
position: 838447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:845894:-1
position: 845894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:845767-845894:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:845088-845134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844355-844406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:843908-843984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:842817-843257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:842511-842673:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:842128-842272:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:840232-840370:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:839400-839604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:838447-838699:-1:exon

OGT
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: OGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(846376..861553)
location: region:846376-861553:-1
so has part: feature:846376-861553:-1:exon
subclass of: SO_0000010

100538830
type: Gene
SIO_000068: ncbigene

position:846376:-1
position: 846376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861553:-1
position: 861553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:846376-861553:-1:exon

OGT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: OGT
product: O-linked N-acetylglucosamine (GlcNAc) transferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 215 samples with support for all annotated introns
transcript id: XM_031554620.1
SIO_010081: OGT
subclass of: SO_0000673
so part of: OGT
location: complement(join(846376..847410,847961..848084,848261..848513,848650..848802,850729..850896,850977..851093,851220..851390,851734..851859,852843..852932,853341..853499,853747..853926,854176..854277,854377..854530,854620..854720,854945..855085,855345..855540,856178..856257,856816..856932,859843..859911,860179..860422,861364..861553))
location: region:846376-861553:-1
so has part: feature:861364-861553:-1:exon
so has part: feature:860179-860422:-1:exon
so has part: feature:859843-859911:-1:exon
so has part: feature:856816-856932:-1:exon
so has part: feature:856178-856257:-1:exon
so has part: feature:855345-855540:-1:exon
so has part: feature:854945-855085:-1:exon
so has part: feature:854620-854720:-1:exon
so has part: feature:854377-854530:-1:exon
so has part: feature:854176-854277:-1:exon
so has part: feature:853747-853926:-1:exon
so has part: feature:853341-853499:-1:exon
so has part: feature:852843-852932:-1:exon
so has part: feature:851734-851859:-1:exon
so has part: feature:851220-851390:-1:exon
so has part: feature:850977-851093:-1:exon
so has part: feature:850729-850896:-1:exon
so has part: feature:848650-848802:-1:exon
so has part: feature:848261-848513:-1:exon
so has part: feature:847961-848084:-1:exon
so has part: feature:846376-847410:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:861364-861553:-1:exon

position:861364:-1
position: 861364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:860179-860422:-1:exon

position:860179:-1
position: 860179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860422:-1
position: 860422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:859843-859911:-1:exon

position:859843:-1
position: 859843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859911:-1
position: 859911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:856816-856932:-1:exon

position:856816:-1
position: 856816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856932:-1
position: 856932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:856178-856257:-1:exon

position:856178:-1
position: 856178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856257:-1
position: 856257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:855345-855540:-1:exon

position:855345:-1
position: 855345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855540:-1
position: 855540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:854945-855085:-1:exon

position:854945:-1
position: 854945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:855085:-1
position: 855085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:854620-854720:-1:exon

position:854620:-1
position: 854620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854720:-1
position: 854720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:854377-854530:-1:exon

position:854377:-1
position: 854377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854530:-1
position: 854530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:854176-854277:-1:exon

position:854176:-1
position: 854176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854277:-1
position: 854277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:853747-853926:-1:exon

position:853747:-1
position: 853747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853926:-1
position: 853926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:853341-853499:-1:exon

position:853341:-1
position: 853341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:853499:-1
position: 853499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:852843-852932:-1:exon

position:852843:-1
position: 852843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852932:-1
position: 852932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:851734-851859:-1:exon

position:851734:-1
position: 851734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851859:-1
position: 851859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:851220-851390:-1:exon

position:851220:-1
position: 851220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851390:-1
position: 851390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:850977-851093:-1:exon

position:850977:-1
position: 850977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851093:-1
position: 851093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:850729-850896:-1:exon

position:850729:-1
position: 850729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:850896:-1
position: 850896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:848650-848802:-1:exon

position:848650:-1
position: 848650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848802:-1
position: 848802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:848261-848513:-1:exon

position:848261:-1
position: 848261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848513:-1
position: 848513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:847961-848084:-1:exon

position:847961:-1
position: 847961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:848084:-1
position: 848084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:846376-847410:-1:exon

position:847410:-1
position: 847410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OGT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: OGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1
translation: MLSFQGLAELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHSFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKASEGRLRIGYVSSDFGNHPTSHLMQSIPGMHNPDKFEVFCYALSPDDGTNFRVKVMAEANHFVDLSQIPCNGKAADRIHQDGIHILINMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDKETSPVEVAEQYSEKLAYMPNTFFIGDHANMFPHLKKKAVIDFKSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDSGDSADSNAALSMPVIPMNTIAEAVIEMINRGQIQITINGFNISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPEDAVVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNLGLSQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMDLERLYLQMWDHYAAGNKPDHMIKPVEASESA
SIO_010081: OGT
subclass of: SO_0000673
so part of: OGT
location: complement(join(847236..847410,847961..848084,848261..848513,848650..848802,850729..850896,850977..851093,851220..851390,851734..851859,852843..852932,853341..853499,853747..853926,854176..854277,854377..854530,854620..854720,854945..855085,855345..855540,856178..856257,856816..856932,859843..859911,860179..860422,861364..861530))
location: region:847236-861530:-1
so has part: feature:861364-861530:-1:exon
so has part: feature:860179-860422:-1:exon
so has part: feature:859843-859911:-1:exon
so has part: feature:856816-856932:-1:exon
so has part: feature:856178-856257:-1:exon
so has part: feature:855345-855540:-1:exon
so has part: feature:854945-855085:-1:exon
so has part: feature:854620-854720:-1:exon
so has part: feature:854377-854530:-1:exon
so has part: feature:854176-854277:-1:exon
so has part: feature:853747-853926:-1:exon
so has part: feature:853341-853499:-1:exon
so has part: feature:852843-852932:-1:exon
so has part: feature:851734-851859:-1:exon
so has part: feature:851220-851390:-1:exon
so has part: feature:850977-851093:-1:exon
so has part: feature:850729-850896:-1:exon
so has part: feature:848650-848802:-1:exon
so has part: feature:848261-848513:-1:exon
so has part: feature:847961-848084:-1:exon
so has part: feature:847236-847410:-1:exon

XP_031410480.1
type: Protein
SIO_000068: ncbiprotein

position:847236:-1
position: 847236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:861530:-1
position: 861530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:861364-861530:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:860179-860422:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859843-859911:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:856816-856932:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:856178-856257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:855345-855540:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:854945-855085:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:854620-854720:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:854377-854530:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:854176-854277:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:853747-853926:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:853341-853499:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:852843-852932:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:851734-851859:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:851220-851390:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:850977-851093:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:850729-850896:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:848650-848802:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:848261-848513:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:847961-848084:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:847236-847410:-1:exon

OGT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: OGT
product: O-linked N-acetylglucosamine (GlcNAc) transferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 198 samples with support for all annotated introns
transcript id: XM_031554621.1
SIO_010081: OGT
subclass of: SO_0000673
so part of: OGT
location: complement(join(847236..847410,847961..848084,848261..848513,848650..848802,850729..850896,850977..851093,851220..851390,851734..851859,852843..852932,853341..853499,853747..853926,854176..854277,854377..854530,854620..854720,854945..855085,855345..855540,856178..856257,856816..856932,858087..859816))
location: region:847236-859816:-1
so has part: feature:858087-859816:-1:exon
so has part: feature:856816-856932:-1:exon
so has part: feature:856178-856257:-1:exon
so has part: feature:855345-855540:-1:exon
so has part: feature:854945-855085:-1:exon
so has part: feature:854620-854720:-1:exon
so has part: feature:854377-854530:-1:exon
so has part: feature:854176-854277:-1:exon
so has part: feature:853747-853926:-1:exon
so has part: feature:853341-853499:-1:exon
so has part: feature:852843-852932:-1:exon
so has part: feature:851734-851859:-1:exon
so has part: feature:851220-851390:-1:exon
so has part: feature:850977-851093:-1:exon
so has part: feature:850729-850896:-1:exon
so has part: feature:848650-848802:-1:exon
so has part: feature:848261-848513:-1:exon
so has part: feature:847961-848084:-1:exon
so has part: feature:847236-847410:-1:exon

position:859816:-1
position: 859816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858087-859816:-1:exon

position:858087:-1
position: 858087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:856816-856932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856178-856257:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855345-855540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854945-855085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854620-854720:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:854377-854530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:854176-854277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853747-853926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:853341-853499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:852843-852932:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:851734-851859:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:851220-851390:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:850977-851093:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850729-850896:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:848650-848802:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:848261-848513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:847961-848084:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:847236-847410:-1:exon

OGT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: OGT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2
translation: MMRNMACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYDERMKKLVSIVADQLEKNRLPSVHPHHSMLYPLSHSFRKAIAERHGNLCLDKINVLHKPPYEHPKDLKASEGRLRIGYVSSDFGNHPTSHLMQSIPGMHNPDKFEVFCYALSPDDGTNFRVKVMAEANHFVDLSQIPCNGKAADRIHQDGIHILINMNGYTKGARNELFALRPAPIQAMWLGYPGTSGALFMDYIITDKETSPVEVAEQYSEKLAYMPNTFFIGDHANMFPHLKKKAVIDFKSNGHIYDNRIVLNGIDLKAFLDSLPDVKIVKMKCPDSGDSADSNAALSMPVIPMNTIAEAVIEMINRGQIQITINGFNISNGLATTQINNKAATGEEVPRTIIVTTRSQYGLPEDAVVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNLGLSQNRIIFSPVAPKEEHVRRGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKSRQEYEDIAVKLGTDLEYLKKIRGKVWKQRISSPLFNTKQYTMDLERLYLQMWDHYAAGNKPDHMIKPVEASESA
SIO_010081: OGT
subclass of: SO_0000673
so part of: OGT
location: complement(join(847236..847410,847961..848084,848261..848513,848650..848802,850729..850896,850977..851093,851220..851390,851734..851859,852843..852932,853341..853499,853747..853926,854176..854277,854377..854530,854620..854720,854945..855085,855345..855540,856178..856257,856816..856932,858087..858101))
location: region:847236-858101:-1
so has part: feature:858087-858101:-1:exon
so has part: feature:856816-856932:-1:exon
so has part: feature:856178-856257:-1:exon
so has part: feature:855345-855540:-1:exon
so has part: feature:854945-855085:-1:exon
so has part: feature:854620-854720:-1:exon
so has part: feature:854377-854530:-1:exon
so has part: feature:854176-854277:-1:exon
so has part: feature:853747-853926:-1:exon
so has part: feature:853341-853499:-1:exon
so has part: feature:852843-852932:-1:exon
so has part: feature:851734-851859:-1:exon
so has part: feature:851220-851390:-1:exon
so has part: feature:850977-851093:-1:exon
so has part: feature:850729-850896:-1:exon
so has part: feature:848650-848802:-1:exon
so has part: feature:848261-848513:-1:exon
so has part: feature:847961-848084:-1:exon
so has part: feature:847236-847410:-1:exon

XP_031410481.1
type: Protein
SIO_000068: ncbiprotein

position:858101:-1
position: 858101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:858087-858101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:856816-856932:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:856178-856257:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:855345-855540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:854945-855085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:854620-854720:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:854377-854530:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:854176-854277:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:853747-853926:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:853341-853499:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:852843-852932:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:851734-851859:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:851220-851390:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:850977-851093:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:850729-850896:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:848650-848802:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:848261-848513:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:847961-848084:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:847236-847410:-1:exon

FUNDC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: FUNDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 862185..869623
location: region:862185-869623:1
so has part: feature:862185-869623:1:exon
subclass of: SO_0000010

100539294
type: Gene
SIO_000068: ncbigene

position:862185:1
position: 862185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:869623:1
position: 869623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862185-869623:1:exon

FUNDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: FUNDC2
product: FUN14 domain containing 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010715132.2
SIO_010081: FUNDC2
subclass of: SO_0000673
so part of: FUNDC2
location: join(862185..862218,863625..863841,865038..865113,866009..866143,866812..869623)
location: region:862185-869623:1
so has part: feature:862185-862218:1:exon
so has part: feature:863625-863841:1:exon
so has part: feature:865038-865113:1:exon
so has part: feature:866009-866143:1:exon
so has part: feature:866812-869623:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:862185-862218:1:exon

position:862218:1
position: 862218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:863625-863841:1:exon

position:863625:1
position: 863625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:863841:1
position: 863841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:865038-865113:1:exon

position:865038:1
position: 865038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:865113:1
position: 865113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:866009-866143:1:exon

position:866009:1
position: 866009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:866143:1
position: 866143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:866812-869623:1:exon

position:866812:1
position: 866812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FUNDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: FUNDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FUN14 domain-containing protein 2
translation: MLSDERAPSSRGRALRGGRLGGSVVQLRARPPAGRKEDAFNVLDLAEYTKSRPWWKKVFAPSSGSSAEKYNVATQLVIGGVTGWCTGFIFQKVGKLAATAVGGGFFLLQIANHTGYIKVDWKLVERDVNKAKQQLKFHSSSNKMSPEVKSKVDEVIVFLKKNVILTGGFAGGFLLGMAS
SIO_010081: FUNDC2
subclass of: SO_0000673
so part of: FUNDC2
location: join(862185..862218,863625..863841,865038..865113,866009..866143,866812..866889)
location: region:862185-866889:1
so has part: feature:862185-862218:1:exon
so has part: feature:863625-863841:1:exon
so has part: feature:865038-865113:1:exon
so has part: feature:866009-866143:1:exon
so has part: feature:866812-866889:1:exon

XP_010713434.1
type: Protein
SIO_000068: ncbiprotein

position:866889:1
position: 866889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:862185-862218:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:863625-863841:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:865038-865113:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:866009-866143:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:866812-866889:1:exon

CMC4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(870104..878380)
location: region:870104-878380:-1
so has part: feature:870104-878380:-1:exon
subclass of: SO_0000010

100547833
type: Gene
SIO_000068: ncbigene

position:870104:-1
position: 870104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878380:-1
position: 878380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:870104-878380:-1:exon

CMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CMC4
product: C-X9-C motif containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010715009.3
SIO_010081: CMC4
subclass of: SO_0000673
so part of: CMC4
location: complement(join(870104..871612,874148..874215,878298..878380))
location: region:870104-878380:-1
so has part: feature:878298-878380:-1:exon
so has part: feature:874148-874215:-1:exon
so has part: feature:870104-871612:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878298-878380:-1:exon

position:878298:-1
position: 878298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:874148-874215:-1:exon

position:874148:-1
position: 874148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874215:-1
position: 874215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:870104-871612:-1:exon

position:871612:-1
position: 871612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CMC4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CMC4
product: C-X9-C motif containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_010715007.3
SIO_010081: CMC4
subclass of: SO_0000673
so part of: CMC4
location: complement(join(870104..871612,874148..874215,875136..875273))
location: region:870104-875273:-1
so has part: feature:875136-875273:-1:exon
so has part: feature:874148-874215:-1:exon
so has part: feature:870104-871612:-1:exon

position:875273:-1
position: 875273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875136-875273:-1:exon

position:875136:-1
position: 875136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:874148-874215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:870104-871612:-1:exon

CMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cx9C motif-containing protein 4
translation: MSQKDPCQKQACEIQKCLQANNYVESKCEAVLREMRKCCARYPKGRSICCSGFEKEEREKRKATSEGIPPPPQ
SIO_010081: CMC4
subclass of: SO_0000673
so part of: CMC4
location: complement(join(871449..871612,874148..874205))
location: region:871449-874205:-1
so has part: feature:874148-874205:-1:exon
so has part: feature:871449-871612:-1:exon

XP_010713309.1
type: Protein
SIO_000068: ncbiprotein

position:871449:-1
position: 871449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874205:-1
position: 874205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874148-874205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871449-871612:-1:exon

CMC4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CMC4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cx9C motif-containing protein 4
translation: MSQKDPCQKQACEIQKCLQANNYVESKCEAVLREMRKCCARYPKGRSICCSGFEKEEREKRKATSEGIPPPPQ
SIO_010081: CMC4
subclass of: SO_0000673
so part of: CMC4
location: complement(join(871449..871612,874148..874205))
location: region:871449-874205:-1
so has part: feature:874148-874205:-1:exon
so has part: feature:871449-871612:-1:exon

XP_010713311.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:874148-874205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871449-871612:-1:exon

MTCP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MTCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(875174..878383)
location: region:875174-878383:-1
so has part: feature:875174-878383:-1:exon
subclass of: SO_0000010

100539140
type: Gene
SIO_000068: ncbigene

position:875174:-1
position: 875174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878383:-1
position: 878383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875174-878383:-1:exon

MTCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MTCP1
product: mature T cell proliferation 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019618072.2
SIO_010081: MTCP1
subclass of: SO_0000673
so part of: MTCP1
location: complement(join(875174..875316,875398..875449,875604..875774,875876..876982,878298..878383))
location: region:875174-878383:-1
so has part: feature:878298-878383:-1:exon
so has part: feature:875876-876982:-1:exon
so has part: feature:875604-875774:-1:exon
so has part: feature:875398-875449:-1:exon
so has part: feature:875174-875316:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:878298-878383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875876-876982:-1:exon

position:875876:-1
position: 875876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:876982:-1
position: 876982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:875604-875774:-1:exon

position:875604:-1
position: 875604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875774:-1
position: 875774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:875398-875449:-1:exon

position:875398:-1
position: 875398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875449:-1
position: 875449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:875174-875316:-1:exon

position:875316:-1
position: 875316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTCP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MTCP1
product: mature T cell proliferation 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 86 samples with support for all annotated introns
transcript id: XM_003205630.3
SIO_010081: MTCP1
subclass of: SO_0000673
so part of: MTCP1
location: complement(join(875174..875316,875398..875449,875604..875774,875876..878291))
location: region:875174-878291:-1
so has part: feature:875876-878291:-1:exon
so has part: feature:875604-875774:-1:exon
so has part: feature:875398-875449:-1:exon
so has part: feature:875174-875316:-1:exon

position:878291:-1
position: 878291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875876-878291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875604-875774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:875398-875449:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:875174-875316:-1:exon

MTCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MTCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein p13 MTCP-1
translation: MAEGGQAGAPPVRLWVRRVGVYCDEHRRTWLVAAEEEEGMLRARIQRVQVPLGEALRPSQLPPSRLPHMWQLSQGEQYRDSNSRVWEIEHHLMLGGVEELLLKLVPGD
SIO_010081: MTCP1
subclass of: SO_0000673
so part of: MTCP1
location: complement(join(875402..875449,875604..875774,875876..875983))
location: region:875402-875983:-1
so has part: feature:875876-875983:-1:exon
so has part: feature:875604-875774:-1:exon
so has part: feature:875402-875449:-1:exon

XP_019473617.1
type: Protein
SIO_000068: ncbiprotein

position:875402:-1
position: 875402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875983:-1
position: 875983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875876-875983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875604-875774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:875402-875449:-1:exon

MTCP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MTCP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein p13 MTCP-1
translation: MAEGGQAGAPPVRLWVRRVGVYCDEHRRTWLVAAEEEEGMLRARIQRVQVPLGEALRPSQLPPSRLPHMWQLSQGEQYRDSNSRVWEIEHHLMLGGVEELLLKLVPGD
SIO_010081: MTCP1
subclass of: SO_0000673
so part of: MTCP1
location: complement(join(875402..875449,875604..875774,875876..875983))
location: region:875402-875983:-1
so has part: feature:875876-875983:-1:exon
so has part: feature:875604-875774:-1:exon
so has part: feature:875402-875449:-1:exon

XP_003205678.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:875876-875983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:875604-875774:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:875402-875449:-1:exon

LOC109369009
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369009
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 882443..885234
location: region:882443-885234:1
so has part: feature:882443-885234:1:exon
subclass of: SO_0000011

109369009
type: Gene
SIO_000068: ncbigene

position:882443:1
position: 882443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885234:1
position: 885234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882443-885234:1:exon

LOC109369009
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369009
product: uncharacterized LOC109369009
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002117563.2
SIO_010081: LOC109369009
subclass of: SO_0000673
so part of: LOC109369009
location: join(882443..882523,883926..883985,884384..885234)
location: region:882443-885234:1
so has part: feature:882443-882523:1:exon
so has part: feature:883926-883985:1:exon
so has part: feature:884384-885234:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882443-882523:1:exon

position:882523:1
position: 882523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:883926-883985:1:exon

position:883926:1
position: 883926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883985:1
position: 883985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:884384-885234:1:exon

position:884384:1
position: 884384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

F8
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: F8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(883301..902651)
location: region:883301-902651:-1
so has part: feature:883301-902651:-1:exon
subclass of: SO_0000010

100539449
type: Gene
SIO_000068: ncbigene

position:883301:-1
position: 883301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902651:-1
position: 902651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:883301-902651:-1:exon

F8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: F8
product: coagulation factor VIII
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_010715010.3
SIO_010081: F8
subclass of: SO_0000673
so part of: F8
location: complement(join(883301..883700,883905..884081,884351..884499,885241..885385,885697..885852,885975..886060,886324..886395,887251..887367,887560..887742,887837..888065,888651..888845,888974..889139,889490..891791,892773..892982,893089..893239,893560..893771,894178..894271,894859..895033,895521..895758,896000..896221,897489..897578,897937..898008,898996..899208,899690..899812,899965..900089,902377..902651))
location: region:883301-902651:-1
so has part: feature:902377-902651:-1:exon
so has part: feature:899965-900089:-1:exon
so has part: feature:899690-899812:-1:exon
so has part: feature:898996-899208:-1:exon
so has part: feature:897937-898008:-1:exon
so has part: feature:897489-897578:-1:exon
so has part: feature:896000-896221:-1:exon
so has part: feature:895521-895758:-1:exon
so has part: feature:894859-895033:-1:exon
so has part: feature:894178-894271:-1:exon
so has part: feature:893560-893771:-1:exon
so has part: feature:893089-893239:-1:exon
so has part: feature:892773-892982:-1:exon
so has part: feature:889490-891791:-1:exon
so has part: feature:888974-889139:-1:exon
so has part: feature:888651-888845:-1:exon
so has part: feature:887837-888065:-1:exon
so has part: feature:887560-887742:-1:exon
so has part: feature:887251-887367:-1:exon
so has part: feature:886324-886395:-1:exon
so has part: feature:885975-886060:-1:exon
so has part: feature:885697-885852:-1:exon
so has part: feature:885241-885385:-1:exon
so has part: feature:884351-884499:-1:exon
so has part: feature:883905-884081:-1:exon
so has part: feature:883301-883700:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902377-902651:-1:exon

position:902377:-1
position: 902377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:899965-900089:-1:exon

position:899965:-1
position: 899965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:900089:-1
position: 900089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:899690-899812:-1:exon

position:899690:-1
position: 899690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899812:-1
position: 899812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:898996-899208:-1:exon

position:898996:-1
position: 898996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899208:-1
position: 899208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:897937-898008:-1:exon

position:897937:-1
position: 897937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:898008:-1
position: 898008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:897489-897578:-1:exon

position:897489:-1
position: 897489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:897578:-1
position: 897578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:896000-896221:-1:exon

position:896000:-1
position: 896000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:896221:-1
position: 896221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:895521-895758:-1:exon

position:895521:-1
position: 895521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895758:-1
position: 895758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:894859-895033:-1:exon

position:894859:-1
position: 894859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895033:-1
position: 895033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:894178-894271:-1:exon

position:894178:-1
position: 894178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894271:-1
position: 894271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:893560-893771:-1:exon

position:893560:-1
position: 893560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893771:-1
position: 893771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:893089-893239:-1:exon

position:893089:-1
position: 893089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:893239:-1
position: 893239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:892773-892982:-1:exon

position:892773:-1
position: 892773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:892982:-1
position: 892982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:889490-891791:-1:exon

position:889490:-1
position: 889490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:891791:-1
position: 891791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:888974-889139:-1:exon

position:888974:-1
position: 888974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:889139:-1
position: 889139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:888651-888845:-1:exon

position:888651:-1
position: 888651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888845:-1
position: 888845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:887837-888065:-1:exon

position:887837:-1
position: 887837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:888065:-1
position: 888065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:887560-887742:-1:exon

position:887560:-1
position: 887560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887742:-1
position: 887742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:887251-887367:-1:exon

position:887251:-1
position: 887251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:887367:-1
position: 887367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:886324-886395:-1:exon

position:886324:-1
position: 886324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886395:-1
position: 886395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:885975-886060:-1:exon

position:885975:-1
position: 885975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886060:-1
position: 886060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:885697-885852:-1:exon

position:885697:-1
position: 885697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885852:-1
position: 885852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:885241-885385:-1:exon

position:885241:-1
position: 885241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:885385:-1
position: 885385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:884351-884499:-1:exon

position:884351:-1
position: 884351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884499:-1
position: 884499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:883905-884081:-1:exon

position:883905:-1
position: 883905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:884081:-1
position: 884081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:883301-883700:-1:exon

position:883700:-1
position: 883700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

F8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: F8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coagulation factor VIII
translation: MNISPLGSLHSTMLLGALRCLVLLSLLREGISEVRRYYIGAVETTWDYVHSQLLSTLQAPVGVSGPQGPQPTMPGTLPRYRKAVFVEYLDASFTQPKPKPAWMGLLGPTIRAEVYDTVVITFKNLASHPYNLHAVGVSYWKASEGAGYEDEASQPEQEGDRVDPGKTHTYIWEIQQNQGPTDGDSQCLTHSYSSNVNSVKDTNSGLIGALLVCRPGTLVRDGVQNMQQDLVMLFAVFDEGKSWYSEPNSPAHSRTELHTINGYINSSLPGLTLCHKKQVHWHVIALGTGPEVHSIFFEGHTFLVRGHRLSSLEISPATYLTAQTMPGTAGSFRIFCQMPSHQQAGMEAVVKVEECPDELQQKMGQPSDELEYMDEPEEEEEEGYHVIQVRSFAKKDPVTWTHYIAAEEMDWDYAPVKPPSLDRNISRLFLEAGPQRIGSKYKKVMFVEYEDATFKKRKVSSQPGQGILGPVLKGEVGDQFKIVFRNLASRPYNIYPHGLTSVNPYHAMKASQEKDVKDIPIAPGESFTYRWSITTEDGPTQADPRCLTRFYYSSINPVQDTASGLIGPLLICFKKSMDQRGNQIMSDDMRLVLFSVFDENRSWYLEENIRRFCSDAAHVDRQDPQFYASNVMHTINGFVFDNLQLQLCLHEVVYWYVLSVGAQTDFLSVFFSGNTFKRNMVFEDMLTLFPFSGETVFMSVEKPGIWTLGCMNPDFRDRGMHAKFTVTQCQLEGSPDEEEYEDYAEEAFEFQPRGFSKRKNKLRPCVSEQPNNVTSSKNETRKPALCLTEPSHGALPHNGTNSGPSSNGTSAFPESPRAGDISTSPLPETHYDVVSYESFLADEEELSKAISQDQGAGALPSGKYTSGEVHGTVNSREGLHQSKPAPEDAMVEKKVTNVLEVQEPVKAAVIQAGSTLQMLETETQKPTAHTNDLWNSTEFAAGKGPLQGTRSSFQQDDLERSLGLQVTSSEGADVMPLNLHESREASNTGPTLGSDPNSSFTPDSPLGPSARTEDIRTSHSHNAESNHTSNELDARLNKRPHKVVSQSFNESLGGENVSFSDLQPVQEQILTDMKNSLPANSSMEEAKGTFAYSNDLEPSRYLTTEERDELILEAVFQDAIATKELPGTGSLVLPESNLVPNDTRQSPNALSMGVPGWRPRQARSLQSRGFEHGLGLPSPTSGSRESLSVGNGAEQDQQSSSLPTQTALQSQAVMADSSSALQDGNNARDVASNWDPASPEAARHAVGLQSPALAPMQPSGGAAWGDLRDKQAEGRSQLEEETNAVEQPYRERAWFSPQHLEANTTKDTVSESTSGQNPNEIPTKVAPKENTSLPLSSPAFNHSTVEIPDKHVQASSDGQLVLGRKNVPGETGRVEEPEEDGESGSTVGKRNHATEHGDSLNNKTLSSLLMSESNITDYDDYSETEQDFDIYEENEHDPRSFQGQIRQYFIAAMEVIWEYGNQRPQHFLKATDPMSGRRKPLRQYRKVIFREYLDDSFTQPAMRGELDEHLGILGPYIRAEVEDTIMVKFKNLASRPFSFHSSLQGYEELQGGEAVQPGELREYSWKVLPQMAPTTQEFDCKAWAYLSNVDLEKDLHSGLIGPLIICRRGVLNSAFKRQLAVQEFSLLFTIFDETRSWYFAENMRRNCRPPCRIQLDNPDFRRNHSFHAINGYVGDTLPGLVMAQQQRIRWHLLNMGSTEDIHSVHFHGQIFSVRTSQEYRMGVYNLYPGVFGTVEMHPSHAGIWRVECKVGEHLQAGMSALFLVYNQDCQNALGMASGYIADSQITASGQEGPWAPKLARLHNSGSINAWSTGEGNPWIQVDLLHLKIIHGIKTQGARQKLSSLYVSQFVVFYSLDGQRWKKYKGNTTSTQMMFFANVDATTVKENRFNPPIIARYIRISPTHYSIRTTLRMELIGCDLNSCSMALGMESKGIPDQRISASSYSSNIFSSWSPSQARLNLQGRSNAWRPESNSPSEWLQVDFEATKKVTAIITQGAKSVF…
SIO_010081: F8
subclass of: SO_0000673
so part of: F8
location: complement(join(883545..883700,883905..884081,884351..884499,885241..885385,885697..885852,885975..886060,886324..886395,887251..887367,887560..887742,887837..888065,888651..888845,888974..889139,889490..891791,892773..892982,893089..893239,893560..893771,894178..894271,894859..895033,895521..895758,896000..896221,897489..897578,897937..898008,898996..899208,899690..899812,899965..900089,902377..902561))
location: region:883545-902561:-1
so has part: feature:902377-902561:-1:exon
so has part: feature:899965-900089:-1:exon
so has part: feature:899690-899812:-1:exon
so has part: feature:898996-899208:-1:exon
so has part: feature:897937-898008:-1:exon
so has part: feature:897489-897578:-1:exon
so has part: feature:896000-896221:-1:exon
so has part: feature:895521-895758:-1:exon
so has part: feature:894859-895033:-1:exon
so has part: feature:894178-894271:-1:exon
so has part: feature:893560-893771:-1:exon
so has part: feature:893089-893239:-1:exon
so has part: feature:892773-892982:-1:exon
so has part: feature:889490-891791:-1:exon
so has part: feature:888974-889139:-1:exon
so has part: feature:888651-888845:-1:exon
so has part: feature:887837-888065:-1:exon
so has part: feature:887560-887742:-1:exon
so has part: feature:887251-887367:-1:exon
so has part: feature:886324-886395:-1:exon
so has part: feature:885975-886060:-1:exon
so has part: feature:885697-885852:-1:exon
so has part: feature:885241-885385:-1:exon
so has part: feature:884351-884499:-1:exon
so has part: feature:883905-884081:-1:exon
so has part: feature:883545-883700:-1:exon

XP_010713312.1
type: Protein
SIO_000068: ncbiprotein

position:883545:-1
position: 883545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902561:-1
position: 902561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902377-902561:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:899965-900089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:899690-899812:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:898996-899208:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:897937-898008:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:897489-897578:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:896000-896221:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:895521-895758:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:894859-895033:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:894178-894271:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:893560-893771:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:893089-893239:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:892773-892982:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:889490-891791:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:888974-889139:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:888651-888845:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:887837-888065:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:887560-887742:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:887251-887367:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:886324-886395:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:885975-886060:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:885697-885852:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:885241-885385:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:884351-884499:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:883905-884081:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:883545-883700:-1:exon

LOC109369010
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 899674..903502
location: region:899674-903502:1
so has part: feature:899674-903502:1:exon
subclass of: SO_0000011

109369010
type: Gene
SIO_000068: ncbigene

position:899674:1
position: 899674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903502:1
position: 903502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:899674-903502:1:exon

LOC109369010
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369010
product: uncharacterized LOC109369010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004160599.1
SIO_010081: LOC109369010
subclass of: SO_0000673
so part of: LOC109369010
location: join(899674..899760,902712..902826,903304..903502)
location: region:899674-903502:1
so has part: feature:899674-899760:1:exon
so has part: feature:902712-902826:1:exon
so has part: feature:903304-903502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:899674-899760:1:exon

position:899760:1
position: 899760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:902712-902826:1:exon

position:902712:1
position: 902712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:902826:1
position: 902826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:903304-903502:1:exon

position:903304:1
position: 903304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DKC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DKC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 906915..916596
location: region:906915-916596:1
so has part: feature:906915-916596:1:exon
subclass of: SO_0000010

100539755
type: Gene
SIO_000068: ncbigene

position:906915:1
position: 906915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:916596:1
position: 916596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906915-916596:1:exon

DKC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DKC1
product: dyskerin pseudouridine synthase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019618031.2
SIO_010081: DKC1
subclass of: SO_0000673
so part of: DKC1
location: join(906915..907043,908470..908610,908900..908991,909480..909664,910139..910203,910771..910897,911240..911370,912371..912514,912779..912899,913620..913738,914282..914385,914841..914907,915527..915685,915906..916596)
location: region:906915-916596:1
so has part: feature:906915-907043:1:exon
so has part: feature:908470-908610:1:exon
so has part: feature:908900-908991:1:exon
so has part: feature:909480-909664:1:exon
so has part: feature:910139-910203:1:exon
so has part: feature:910771-910897:1:exon
so has part: feature:911240-911370:1:exon
so has part: feature:912371-912514:1:exon
so has part: feature:912779-912899:1:exon
so has part: feature:913620-913738:1:exon
so has part: feature:914282-914385:1:exon
so has part: feature:914841-914907:1:exon
so has part: feature:915527-915685:1:exon
so has part: feature:915906-916596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:906915-907043:1:exon

position:907043:1
position: 907043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:908470-908610:1:exon

position:908470:1
position: 908470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908610:1
position: 908610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:908900-908991:1:exon

position:908900:1
position: 908900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:908991:1
position: 908991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:909480-909664:1:exon

position:909480:1
position: 909480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909664:1
position: 909664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:910139-910203:1:exon

position:910139:1
position: 910139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910203:1
position: 910203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:910771-910897:1:exon

position:910771:1
position: 910771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910897:1
position: 910897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:911240-911370:1:exon

position:911240:1
position: 911240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911370:1
position: 911370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:912371-912514:1:exon

position:912371:1
position: 912371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912514:1
position: 912514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:912779-912899:1:exon

position:912779:1
position: 912779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912899:1
position: 912899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:913620-913738:1:exon

position:913620:1
position: 913620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913738:1
position: 913738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:914282-914385:1:exon

position:914282:1
position: 914282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914385:1
position: 914385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:914841-914907:1:exon

position:914841:1
position: 914841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:914907:1
position: 914907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:915527-915685:1:exon

position:915527:1
position: 915527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:915685:1
position: 915685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:915906-916596:1:exon

position:915906:1
position: 915906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DKC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: DKC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: H/ACA ribonucleoprotein complex subunit DKC1
translation: MAMRVVTHGCPPEPPSSLEPSVAPCTKDTCFWQRTTLSGGNGQWERNRAAHTEPSPRCAPQDIQHTEEFLIKPESRVAQLDTSQWPLLLKNFDKLNVLTTHYTPLPSGANPLKREISDYVRSGFINLDKPSNPSSHEVVAWIRRILRVEKTGHSGTLDPKVTGCLIVCIERATRLVKSQQSAGKEYVGIVRLHNAIESEAQLARAIETLTGALFQRPPLIAAVKRQLRVRTIYESKLVEYDPEKRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMQELRRVRSGILGEMDNMVTMHDVLDAQWQYDNNKDDSYLRRVILPLEKLLTSHKRLVMKDSAVNAICYGAKIMLPGVLRYEDGIELNQEIVVITTKGEAICLAIALMTTAVISTCDHGVVAKIKRVIMERDTYPRKWGLGPKASQKKMMIQKGLLDKHGKPNECTPDSWKKEYVDYRESSKKEAAKAPQAVSEVERAPKRKRESESENEAASPPPSPATPPPEELSKKEKKKKKKEKKAKEASESGEEQIEVISETSTKKKKKKKKQKEVEESSE
SIO_010081: DKC1
subclass of: SO_0000673
so part of: DKC1
location: join(906915..907043,908470..908610,908900..908991,909480..909664,910139..910203,910771..910897,911240..911370,912371..912514,912779..912899,913620..913738,914282..914385,914841..914907,915527..915685,915906..915977)
location: region:906915-915977:1
so has part: feature:906915-907043:1:exon
so has part: feature:908470-908610:1:exon
so has part: feature:908900-908991:1:exon
so has part: feature:909480-909664:1:exon
so has part: feature:910139-910203:1:exon
so has part: feature:910771-910897:1:exon
so has part: feature:911240-911370:1:exon
so has part: feature:912371-912514:1:exon
so has part: feature:912779-912899:1:exon
so has part: feature:913620-913738:1:exon
so has part: feature:914282-914385:1:exon
so has part: feature:914841-914907:1:exon
so has part: feature:915527-915685:1:exon
so has part: feature:915906-915977:1:exon

XP_019473576.1
type: Protein
SIO_000068: ncbiprotein

position:915977:1
position: 915977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906915-907043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:908470-908610:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:908900-908991:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:909480-909664:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:910139-910203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:910771-910897:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:911240-911370:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:912371-912514:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:912779-912899:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:913620-913738:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:914282-914385:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:914841-914907:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:915527-915685:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:915906-915977:1:exon

LOC116216957
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116216957
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 910304..910550
location: region:910304-910550:1
so has part: feature:910304-910550:1:exon
subclass of: SO_0000578

116216957
type: Gene
SIO_000068: ncbigene

position:910304:1
position: 910304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910550:1
position: 910550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910304-910550:1:exon

LOC116216957
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116216957
product: small nucleolar RNA SNORD17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00567
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004160703.1
SIO_010081: LOC116216957
subclass of: SO_0000673
so part of: LOC116216957
location: 910304..910550
location: region:910304-910550:1
so has part: feature:910304-910550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:910304-910550:1:exon

LOC116216952
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116216952
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 911087..911162
location: region:911087-911162:1
so has part: feature:911087-911162:1:exon
subclass of: SO_0000578

116216952
type: Gene
SIO_000068: ncbigene

position:911087:1
position: 911087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911162:1
position: 911162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911087-911162:1:exon

LOC116216952
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116216952
product: small nucleolar RNA SNORD83
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00137
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004160698.1
SIO_010081: LOC116216952
subclass of: SO_0000673
so part of: LOC116216952
location: 911087..911162
location: region:911087-911162:1
so has part: feature:911087-911162:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:911087-911162:1:exon

LOC116216955
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116216955
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 911536..911669
location: region:911536-911669:1
so has part: feature:911536-911669:1:exon
subclass of: SO_0000578

116216955
type: Gene
SIO_000068: ncbigene

position:911536:1
position: 911536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911669:1
position: 911669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911536-911669:1:exon

LOC116216955
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116216955
product: small nucleolar RNA SNORA36 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00340
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004160701.1
SIO_010081: LOC116216955
subclass of: SO_0000673
so part of: LOC116216955
location: 911536..911669
location: region:911536-911669:1
so has part: feature:911536-911669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:911536-911669:1:exon

LOC116216956
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116216956
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 913080..913326
location: region:913080-913326:1
so has part: feature:913080-913326:1:exon
subclass of: SO_0000578

116216956
type: Gene
SIO_000068: ncbigene

position:913080:1
position: 913080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913326:1
position: 913326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913080-913326:1:exon

LOC116216956
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116216956
product: small nucleolar RNA SNORD17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00567
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004160702.1
SIO_010081: LOC116216956
subclass of: SO_0000673
so part of: LOC116216956
location: 913080..913326
location: region:913080-913326:1
so has part: feature:913080-913326:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:913080-913326:1:exon

LOC116216951
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC116216951
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 913829..913904
location: region:913829-913904:1
so has part: feature:913829-913904:1:exon
subclass of: SO_0000578

116216951
type: Gene
SIO_000068: ncbigene

position:913829:1
position: 913829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:913904:1
position: 913904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913829-913904:1:exon

LOC116216951
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: snoRNA
gene: LOC116216951
product: small nucleolar RNA SNORD83
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00137
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004160697.1
SIO_010081: LOC116216951
subclass of: SO_0000673
so part of: LOC116216951
location: 913829..913904
location: region:913829-913904:1
so has part: feature:913829-913904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:913829-913904:1:exon

MPP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: MPP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(917595..927728)
location: region:917595-927728:-1
so has part: feature:917595-927728:-1:exon
subclass of: SO_0000010

100539602
type: Gene
SIO_000068: ncbigene

position:917595:-1
position: 917595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927728:-1
position: 927728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:917595-927728:-1:exon

MPP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: MPP1
product: membrane palmitoylated protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 219 samples with support for all annotated introns
transcript id: XM_010715012.3
SIO_010081: MPP1
subclass of: SO_0000673
so part of: MPP1
location: complement(join(917595..918858,920473..920547,920815..921017,921494..921574,922012..922092,922675..922781,923185..923381,925753..925821,926328..926413,927272..927350,927567..927728))
location: region:917595-927728:-1
so has part: feature:927567-927728:-1:exon
so has part: feature:927272-927350:-1:exon
so has part: feature:926328-926413:-1:exon
so has part: feature:925753-925821:-1:exon
so has part: feature:923185-923381:-1:exon
so has part: feature:922675-922781:-1:exon
so has part: feature:922012-922092:-1:exon
so has part: feature:921494-921574:-1:exon
so has part: feature:920815-921017:-1:exon
so has part: feature:920473-920547:-1:exon
so has part: feature:917595-918858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:927567-927728:-1:exon

position:927567:-1
position: 927567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:927272-927350:-1:exon

position:927272:-1
position: 927272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927350:-1
position: 927350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:926328-926413:-1:exon

position:926328:-1
position: 926328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926413:-1
position: 926413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:925753-925821:-1:exon

position:925753:-1
position: 925753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:925821:-1
position: 925821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:923185-923381:-1:exon

position:923185:-1
position: 923185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:923381:-1
position: 923381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:922675-922781:-1:exon

position:922675:-1
position: 922675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922781:-1
position: 922781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:922012-922092:-1:exon

position:922012:-1
position: 922012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:922092:-1
position: 922092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:921494-921574:-1:exon

position:921494:-1
position: 921494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921574:-1
position: 921574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:920815-921017:-1:exon

position:920815:-1
position: 920815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:921017:-1
position: 921017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:920473-920547:-1:exon

position:920473:-1
position: 920473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:920547:-1
position: 920547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:917595-918858:-1:exon

position:918858:-1
position: 918858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: MPP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 55 kDa erythrocyte membrane protein
translation: MTEDIYTNGSATLGSPSHSNGREVRKIRLVQFEKVTEEPMGITLKLNDKQSCMVARIFHGGMIHRQGSLHVGDEIIEINGQSVSNHSVDQLQKMLKETQGMVSIKVIPNQQSRLPALQMFMRAQFDYDPKKDNLIPCKEAGLKFQTGDVIQIINKDDSNWWQGRVEGSGTESAGLIPSPELQEWRVASVTQSSQSEAQSCSPFGKKKKYKDKYLAKHSSIFDQLDVVSYEEVVRLPAFKRKTLVLIGASGVGRSHIKNALLSNNPEKFMYPPPYTTRPQKKNEVDGKDYYFVSTEEMTRDISANEFLEFGSYQGNMFGTKFETVHKIHQQDKVAILDIEPQTLKIVRTAELSPFIVFIAPTDKAEESEALQQLRKDSESIRSRYAHYFDLSIVNNGVEESLKLLEEAFEQACSSPQWVPVSWVY
SIO_010081: MPP1
subclass of: SO_0000673
so part of: MPP1
location: complement(join(918682..918858,920473..920547,920815..921017,921494..921574,922012..922092,922675..922781,923185..923381,925753..925821,926328..926413,927272..927350,927567..927686))
location: region:918682-927686:-1
so has part: feature:927567-927686:-1:exon
so has part: feature:927272-927350:-1:exon
so has part: feature:926328-926413:-1:exon
so has part: feature:925753-925821:-1:exon
so has part: feature:923185-923381:-1:exon
so has part: feature:922675-922781:-1:exon
so has part: feature:922012-922092:-1:exon
so has part: feature:921494-921574:-1:exon
so has part: feature:920815-921017:-1:exon
so has part: feature:920473-920547:-1:exon
so has part: feature:918682-918858:-1:exon

XP_010713314.1
type: Protein
SIO_000068: ncbiprotein

position:918682:-1
position: 918682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:927686:-1
position: 927686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:927567-927686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:927272-927350:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:926328-926413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:925753-925821:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:923185-923381:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:922675-922781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:922012-922092:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:921494-921574:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:920815-921017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:920473-920547:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:918682-918858:-1:exon

CENPI
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CENPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(932645..945617)
location: region:932645-945617:-1
so has part: feature:932645-945617:-1:exon
subclass of: SO_0000010

100499422
type: Gene
SIO_000068: ncbigene

position:932645:-1
position: 932645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:945617:-1
position: 945617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:932645-945617:-1:exon

CENPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CENPI
product: centromere protein I, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_010715014.3
SIO_010081: CENPI
subclass of: SO_0000673
so part of: CENPI
location: complement(join(932645..933027,933760..933808,934888..935012,935649..935784,936150..936247,936704..936768,936866..936983,937273..937364,937570..937690,937948..938112,938347..938475,939117..939206,939889..939935,940259..940307,941418..941525,942041..942159,943143..943280,943908..944209,945535..945617))
location: region:932645-945617:-1
so has part: feature:945535-945617:-1:exon
so has part: feature:943908-944209:-1:exon
so has part: feature:943143-943280:-1:exon
so has part: feature:942041-942159:-1:exon
so has part: feature:941418-941525:-1:exon
so has part: feature:940259-940307:-1:exon
so has part: feature:939889-939935:-1:exon
so has part: feature:939117-939206:-1:exon
so has part: feature:938347-938475:-1:exon
so has part: feature:937948-938112:-1:exon
so has part: feature:937570-937690:-1:exon
so has part: feature:937273-937364:-1:exon
so has part: feature:936866-936983:-1:exon
so has part: feature:936704-936768:-1:exon
so has part: feature:936150-936247:-1:exon
so has part: feature:935649-935784:-1:exon
so has part: feature:934888-935012:-1:exon
so has part: feature:933760-933808:-1:exon
so has part: feature:932645-933027:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:945535-945617:-1:exon

position:945535:-1
position: 945535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:943908-944209:-1:exon

position:943908:-1
position: 943908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944209:-1
position: 944209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:943143-943280:-1:exon

position:943143:-1
position: 943143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:943280:-1
position: 943280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:942041-942159:-1:exon

position:942041:-1
position: 942041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:942159:-1
position: 942159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:941418-941525:-1:exon

position:941418:-1
position: 941418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:941525:-1
position: 941525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:940259-940307:-1:exon

position:940259:-1
position: 940259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940307:-1
position: 940307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:939889-939935:-1:exon

position:939889:-1
position: 939889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939935:-1
position: 939935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:939117-939206:-1:exon

position:939117:-1
position: 939117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939206:-1
position: 939206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:938347-938475:-1:exon

position:938347:-1
position: 938347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938475:-1
position: 938475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:937948-938112:-1:exon

position:937948:-1
position: 937948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:938112:-1
position: 938112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:937570-937690:-1:exon

position:937570:-1
position: 937570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937690:-1
position: 937690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:937273-937364:-1:exon

position:937273:-1
position: 937273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:937364:-1
position: 937364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:936866-936983:-1:exon

position:936866:-1
position: 936866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936983:-1
position: 936983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:936704-936768:-1:exon

position:936704:-1
position: 936704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936768:-1
position: 936768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:936150-936247:-1:exon

position:936150:-1
position: 936150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:936247:-1
position: 936247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:935649-935784:-1:exon

position:935649:-1
position: 935649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935784:-1
position: 935784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:934888-935012:-1:exon

position:934888:-1
position: 934888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935012:-1
position: 935012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:933760-933808:-1:exon

position:933760:-1
position: 933760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:933808:-1
position: 933808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:932645-933027:-1:exon

position:933027:-1
position: 933027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CENPI
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: CENPI
product: centromere protein I, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_010715013.3
SIO_010081: CENPI
subclass of: SO_0000673
so part of: CENPI
location: complement(join(932645..933027,933760..933808,934888..935012,935649..935784,936150..936247,936704..936768,936866..936983,937273..937364,937570..937690,937948..938112,938347..938475,939117..939206,939889..939935,940259..940307,941418..941525,942041..942159,943143..943280,943908..944209,945430..945528))
location: region:932645-945528:-1
so has part: feature:945430-945528:-1:exon
so has part: feature:943908-944209:-1:exon
so has part: feature:943143-943280:-1:exon
so has part: feature:942041-942159:-1:exon
so has part: feature:941418-941525:-1:exon
so has part: feature:940259-940307:-1:exon
so has part: feature:939889-939935:-1:exon
so has part: feature:939117-939206:-1:exon
so has part: feature:938347-938475:-1:exon
so has part: feature:937948-938112:-1:exon
so has part: feature:937570-937690:-1:exon
so has part: feature:937273-937364:-1:exon
so has part: feature:936866-936983:-1:exon
so has part: feature:936704-936768:-1:exon
so has part: feature:936150-936247:-1:exon
so has part: feature:935649-935784:-1:exon
so has part: feature:934888-935012:-1:exon
so has part: feature:933760-933808:-1:exon
so has part: feature:932645-933027:-1:exon

position:945528:-1
position: 945528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:945430-945528:-1:exon

position:945430:-1
position: 945430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:943908-944209:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:943143-943280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:942041-942159:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:941418-941525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940259-940307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:939889-939935:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:939117-939206:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:938347-938475:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:937948-938112:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:937570-937690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:937273-937364:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:936866-936983:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:936704-936768:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:936150-936247:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:935649-935784:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:934888-935012:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:933760-933808:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:932645-933027:-1:exon

CENPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CENPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein I
translation: MQRRRSSKHSKRPLQVHHSNQTDLSAWRKGGTVDTEKSAQSDQKNDNEQDSLEEALSYFEKIQDRVSVKNNEALQKHLSTMESIALKRGLPPEGFDVLLDVALSGKLADTVNTRLLKSLIPASAIPESSVVSSVSWFCVSKCSNNIQLLYLRWLITMFDFIDHKERIHALYGIFFSFLNDEKLCPYICHVLYLLTRKENVKPFRVRRLLDLQAKMGMQPHLQALLSLYKLFCPELVSITLPRKMKTFFKNADGPWKAAINAVRQRNQANSTVPQLLLLDTAQPHSRKRKWNTQLIVPASSANAQNSVVGRKMSRVDSFSANRFFPVEQLRTFPQLLQNIHRLEFPSQMGSVLTNPLLLHYMNCSKDESVYLRLYYWMGQTLQEECTWCVVDNNQYEEEFKSFLETAYKAECFLQEGFPSCEEFLYRSLPLWDGVSCRSQILQLISWIPLSTFSEIKSQLCDPLAQLFFTSSLYFKCSVLESLKELLQNWLNWHVVQLDSESDSQFSSLNTTLSGLVNGVAELINFVGWISTAALHLEKSHTFLLYFILDFYETVCDIYLKYKLPLLIMPPAGVFYPALLSMDSVNLNQLCYIMYRYRTNLIAAKENEMSKKKIQQFKFSSQTYQEYNQYIIAMVGCLWTSSAFQKDNHPQGICLDDELLKKTGVQEYKNSFNIVYHPALMCYAVDFLQQVML
SIO_010081: CENPI
subclass of: SO_0000673
so part of: CENPI
location: complement(join(932782..933027,933760..933808,934888..935012,935649..935784,936150..936247,936704..936768,936866..936983,937273..937364,937570..937690,937948..938112,938347..938475,939117..939206,939889..939935,940259..940307,941418..941525,942041..942159,943143..943280,943908..944091))
location: region:932782-944091:-1
so has part: feature:943908-944091:-1:exon
so has part: feature:943143-943280:-1:exon
so has part: feature:942041-942159:-1:exon
so has part: feature:941418-941525:-1:exon
so has part: feature:940259-940307:-1:exon
so has part: feature:939889-939935:-1:exon
so has part: feature:939117-939206:-1:exon
so has part: feature:938347-938475:-1:exon
so has part: feature:937948-938112:-1:exon
so has part: feature:937570-937690:-1:exon
so has part: feature:937273-937364:-1:exon
so has part: feature:936866-936983:-1:exon
so has part: feature:936704-936768:-1:exon
so has part: feature:936150-936247:-1:exon
so has part: feature:935649-935784:-1:exon
so has part: feature:934888-935012:-1:exon
so has part: feature:933760-933808:-1:exon
so has part: feature:932782-933027:-1:exon

XP_010713315.1
type: Protein
SIO_000068: ncbiprotein

position:932782:-1
position: 932782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:944091:-1
position: 944091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:943908-944091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943143-943280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:942041-942159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941418-941525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940259-940307:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939889-939935:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:939117-939206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:938347-938475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937948-938112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:937570-937690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:937273-937364:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:936866-936983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:936704-936768:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:936150-936247:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:935649-935784:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:934888-935012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:933760-933808:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:932782-933027:-1:exon

CENPI
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CENPI
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein I
translation: MQRRRSSKHSKRPLQVHHSNQTDLSAWRKGGTVDTEKSAQSDQKNDNEQDSLEEALSYFEKIQDRVSVKNNEALQKHLSTMESIALKRGLPPEGFDVLLDVALSGKLADTVNTRLLKSLIPASAIPESSVVSSVSWFCVSKCSNNIQLLYLRWLITMFDFIDHKERIHALYGIFFSFLNDEKLCPYICHVLYLLTRKENVKPFRVRRLLDLQAKMGMQPHLQALLSLYKLFCPELVSITLPRKMKTFFKNADGPWKAAINAVRQRNQANSTVPQLLLLDTAQPHSRKRKWNTQLIVPASSANAQNSVVGRKMSRVDSFSANRFFPVEQLRTFPQLLQNIHRLEFPSQMGSVLTNPLLLHYMNCSKDESVYLRLYYWMGQTLQEECTWCVVDNNQYEEEFKSFLETAYKAECFLQEGFPSCEEFLYRSLPLWDGVSCRSQILQLISWIPLSTFSEIKSQLCDPLAQLFFTSSLYFKCSVLESLKELLQNWLNWHVVQLDSESDSQFSSLNTTLSGLVNGVAELINFVGWISTAALHLEKSHTFLLYFILDFYETVCDIYLKYKLPLLIMPPAGVFYPALLSMDSVNLNQLCYIMYRYRTNLIAAKENEMSKKKIQQFKFSSQTYQEYNQYIIAMVGCLWTSSAFQKDNHPQGICLDDELLKKTGVQEYKNSFNIVYHPALMCYAVDFLQQVML
SIO_010081: CENPI
subclass of: SO_0000673
so part of: CENPI
location: complement(join(932782..933027,933760..933808,934888..935012,935649..935784,936150..936247,936704..936768,936866..936983,937273..937364,937570..937690,937948..938112,938347..938475,939117..939206,939889..939935,940259..940307,941418..941525,942041..942159,943143..943280,943908..944091))
location: region:932782-944091:-1
so has part: feature:943908-944091:-1:exon
so has part: feature:943143-943280:-1:exon
so has part: feature:942041-942159:-1:exon
so has part: feature:941418-941525:-1:exon
so has part: feature:940259-940307:-1:exon
so has part: feature:939889-939935:-1:exon
so has part: feature:939117-939206:-1:exon
so has part: feature:938347-938475:-1:exon
so has part: feature:937948-938112:-1:exon
so has part: feature:937570-937690:-1:exon
so has part: feature:937273-937364:-1:exon
so has part: feature:936866-936983:-1:exon
so has part: feature:936704-936768:-1:exon
so has part: feature:936150-936247:-1:exon
so has part: feature:935649-935784:-1:exon
so has part: feature:934888-935012:-1:exon
so has part: feature:933760-933808:-1:exon
so has part: feature:932782-933027:-1:exon

XP_010713316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:943908-944091:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:943143-943280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:942041-942159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:941418-941525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:940259-940307:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:939889-939935:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:939117-939206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:938347-938475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:937948-938112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:937570-937690:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:937273-937364:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:936866-936983:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:936704-936768:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:936150-936247:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:935649-935784:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:934888-935012:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:933760-933808:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:932782-933027:-1:exon

TMEM35A
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TMEM35A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(947087..951163)
location: region:947087-951163:-1
so has part: feature:947087-951163:-1:exon
subclass of: SO_0000010

100547982
type: Gene
SIO_000068: ncbigene

position:947087:-1
position: 947087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:951163:-1
position: 951163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:947087-951163:-1:exon

TMEM35A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TMEM35A
product: transmembrane protein 35A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 201 samples with support for all annotated introns
transcript id: XM_003205607.4
SIO_010081: TMEM35A
subclass of: SO_0000673
so part of: TMEM35A
location: complement(join(947087..948361,950812..951163))
location: region:947087-951163:-1
so has part: feature:950812-951163:-1:exon
so has part: feature:947087-948361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950812-951163:-1:exon

position:950812:-1
position: 950812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:947087-948361:-1:exon

position:948361:-1
position: 948361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM35A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TMEM35A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 35A
translation: MASPRTITIVALSVALGLFFVFMGTIKLTPRLSRDAYNEMKRAYKSYVRALPMLKKMGVSSILLRKSIGALEVACGIVMTLVPGRPKDVANFLLLLLVLAVLFFHQLVGDPLKRYAHALVFGILLTCRLLIARQPEEQPPEKRMLSVNGDEQPLLHEAAPEKGKVKVS
SIO_010081: TMEM35A
subclass of: SO_0000673
so part of: TMEM35A
location: complement(join(947975..948361,950812..950931))
location: region:947975-950931:-1
so has part: feature:950812-950931:-1:exon
so has part: feature:947975-948361:-1:exon

XP_003205655.1
type: Protein
SIO_000068: ncbiprotein

position:947975:-1
position: 947975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:950931:-1
position: 950931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950812-950931:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:947975-948361:-1:exon

TRMT2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TRMT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(952322..959685)
location: region:952322-959685:-1
so has part: feature:952322-959685:-1:exon
subclass of: SO_0000010

100539911
type: Gene
SIO_000068: ncbigene

position:952322:-1
position: 952322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959685:-1
position: 959685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:952322-959685:-1:exon

TRMT2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRMT2B
product: tRNA methyltransferase 2 homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 102 samples with support for all annotated introns
transcript id: XM_010715015.3
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952322..952708,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,956740..956859,957255..957309,958220..958494,959056..959685))
location: region:952322-959685:-1
so has part: feature:959056-959685:-1:exon
so has part: feature:958220-958494:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956740-956859:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:952322-952708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:959056-959685:-1:exon

position:959056:-1
position: 959056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:958220-958494:-1:exon

position:958220:-1
position: 958220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958494:-1
position: 958494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:957255-957309:-1:exon

position:957255:-1
position: 957255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:957309:-1
position: 957309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:956740-956859:-1:exon

position:956740:-1
position: 956740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956859:-1
position: 956859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:956164-956263:-1:exon

position:956164:-1
position: 956164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:956263:-1
position: 956263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:955908-955978:-1:exon

position:955908:-1
position: 955908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955978:-1
position: 955978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:955322-955468:-1:exon

position:955322:-1
position: 955322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955468:-1
position: 955468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:955134-955228:-1:exon

position:955134:-1
position: 955134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:955228:-1
position: 955228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:954425-954639:-1:exon

position:954425:-1
position: 954425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954639:-1
position: 954639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:954082-954183:-1:exon

position:954082:-1
position: 954082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954183:-1
position: 954183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:953844-953963:-1:exon

position:953844:-1
position: 953844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953963:-1
position: 953963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:952322-952708:-1:exon

position:952708:-1
position: 952708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRMT2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRMT2B
product: tRNA methyltransferase 2 homolog B, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_019618076.1
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952322..952708,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,957255..957309,958220..958344,958495..958575))
location: region:952322-958575:-1
so has part: feature:958495-958575:-1:exon
so has part: feature:958220-958344:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:952322-952708:-1:exon

position:958575:-1
position: 958575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:958495-958575:-1:exon

position:958495:-1
position: 958495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:958220-958344:-1:exon

position:958344:-1
position: 958344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:952322-952708:-1:exon

TRMT2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRMT2B
product: tRNA methyltransferase 2 homolog B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019618074.1
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952322..952708,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,956740..956859,957255..957309,958220..958344,958495..958575))
location: region:952322-958575:-1
so has part: feature:958495-958575:-1:exon
so has part: feature:958220-958344:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956740-956859:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:952322-952708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:958495-958575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958220-958344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956740-956859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952322-952708:-1:exon

TRMT2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRMT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X5
translation: MMLRSEDGKDQRSITPIAALFQPVFLSSLPGWDCRQPTGETAAKRRRRKDGEGCSLPASSWEERLADAATPLWRLSYQEQLQPTVNGYRNKSTFSVNRGPDGNPKTVGLYVGTGRARNIVCVRTDHMKNIPLKHKQVAQCYEQFIRRSPLGSCILFHEGGHWRELVVRTSQHGHTMAVVTFHPQHLGQEALAAQKALLKEFFTCGPGAACALTSLYFQESTMTRCSHEQSPFQLLHGEPHIFEDVLDLTFRISPDAFFQVNTSGAEVLYQAVRELSQAATNTVLLDVCCGTGTIGLSLARHVSKVIGVEIVQKAVEDARWNAAFNGISNCEFHSGKAEAVLPELLSSWEDARPLVAVVNPSRAGIRCAAPPTPGRSWKESRLPPRWLSLSTCSLTLLTVSWCCCSPADNEEVCSSASSGSDLLMSLRSGCGCDLNLFLYESQEVSYFLLALTAGCLIYMET
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952419..952708,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,957255..957309,958220..958344,958495..958560))
location: region:952419-958560:-1
so has part: feature:958495-958560:-1:exon
so has part: feature:958220-958344:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:952419-952708:-1:exon

XP_019473621.1
type: Protein
SIO_000068: ncbiprotein

position:952419:-1
position: 952419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:958560:-1
position: 958560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:958495-958560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958220-958344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:952419-952708:-1:exon

TRMT2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRMT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X1
translation: MMLRSEDGKDQRSITPIAALFQPVFLSSLPGWDCRQPTGETAAKRRRRKDGEGCSLPASSWEERLADAATPLWRLSYQEQLQVKYESLMEVLQSLTSHLLELRGGVQDPGGLCCPLQPVVPSPTVNGYRNKSTFSVNRGPDGNPKTVGLYVGTGRARNIVCVRTDHMKNIPLKHKQVAQCYEQFIRRSPLGSCILFHEGGHWRELVVRTSQHGHTMAVVTFHPQHLGQEALAAQKALLKEFFTCGPGAACALTSLYFQESTMTRCSHEQSPFQLLHGEPHIFEDVLDLTFRISPDAFFQVNTSGAEVLYQAVRELSQAATNTVLLDVCCGTGTIGLSLARHVSKVIGVEIVQKAVEDARWNAAFNGISNCEFHSGKAEAVLPELLSSWEDARPLVAVVNPSRAGIRCAAPPTPGRSWKESRLPPRWLSLSTCSLTLLTVSWCCCSPADNEEVCSSASSGSDLLMSLRSGCGCDLNLFLYESQEVSYFLLALTAGCLIYMET
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952419..952708,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,956740..956859,957255..957309,958220..958344,958495..958560))
location: region:952419-958560:-1
so has part: feature:958495-958560:-1:exon
so has part: feature:958220-958344:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956740-956859:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:952419-952708:-1:exon

XP_019473619.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:958495-958560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958220-958344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956740-956859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952419-952708:-1:exon

TRMT2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRMT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X2
translation: MALPHASMLTRRCLRLLTPQPVFLSSLPGWDCRQPTGETAAKRRRRKDGEGCSLPASSWEERLADAATPLWRLSYQEQLQVKYESLMEVLQSLTSHLLELRGGVQDPGGLCCPLQPVVPSPTVNGYRNKSTFSVNRGPDGNPKTVGLYVGTGRARNIVCVRTDHMKNIPLKHKQVAQCYEQFIRRSPLGSCILFHEGGHWRELVVRTSQHGHTMAVVTFHPQHLGQEALAAQKALLKEFFTCGPGAACALTSLYFQESTMTRCSHEQSPFQLLHGEPHIFEDVLDLTFRISPDAFFQVNTSGAEVLYQAVRELSQAATNTVLLDVCCGTGTIGLSLARHVSKVIGVEIVQKAVEDARWNAAFNGISNCEFHSGKAEAVLPELLSSWEDARPLVAVVNPSRAGIRCAAPPTPGRSWKESRLPPRWLSLSTCSLTLLTVSWCCCSPADNEEVCSSASSGSDLLMSLRSGCGCDLNLFLYESQEVSYFLLALTAGCLIYMET
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952419..952708,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,956740..956859,957255..957309,958220..958404))
location: region:952419-958404:-1
so has part: feature:958220-958404:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956740-956859:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:952419-952708:-1:exon

XP_010713317.1
type: Protein
SIO_000068: ncbiprotein

position:958404:-1
position: 958404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:958220-958404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:956740-956859:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:952419-952708:-1:exon

TRMT2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRMT2B
product: tRNA methyltransferase 2 homolog B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 206 samples with support for all annotated introns
transcript id: XM_010715016.3
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952453..952708,953477..953576,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,956740..956859,957255..957309,958220..958494,959056..959684))
location: region:952453-959684:-1
so has part: feature:959056-959684:-1:exon
so has part: feature:958220-958494:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956740-956859:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:953477-953576:-1:exon
so has part: feature:952453-952708:-1:exon

position:952453:-1
position: 952453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:959684:-1
position: 959684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959056-959684:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958220-958494:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956740-956859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:953477-953576:-1:exon

position:953477:-1
position: 953477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:953576:-1
position: 953576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:952453-952708:-1:exon

TRMT2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRMT2B
product: tRNA methyltransferase 2 homolog B, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_019618077.2
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952453..952708,953477..953576,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,957255..957309,958220..958344,958495..958575))
location: region:952453-958575:-1
so has part: feature:958495-958575:-1:exon
so has part: feature:958220-958344:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:953477-953576:-1:exon
so has part: feature:952453-952708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:958495-958575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958220-958344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953477-953576:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952453-952708:-1:exon

TRMT2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TRMT2B
product: tRNA methyltransferase 2 homolog B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_019618075.2
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952453..952708,953477..953576,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,956740..956859,957255..957309,958220..958344,958495..958575))
location: region:952453-958575:-1
so has part: feature:958495-958575:-1:exon
so has part: feature:958220-958344:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956740-956859:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:953477-953576:-1:exon
so has part: feature:952453-952708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:958495-958575:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958220-958344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956740-956859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:953477-953576:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:952453-952708:-1:exon

TRMT2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRMT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X6
translation: MMLRSEDGKDQRSITPIAALFQPVFLSSLPGWDCRQPTGETAAKRRRRKDGEGCSLPASSWEERLADAATPLWRLSYQEQLQPTVNGYRNKSTFSVNRGPDGNPKTVGLYVGTGRARNIVCVRTDHMKNIPLKHKQVAQCYEQFIRRSPLGSCILFHEGGHWRELVVRTSQHGHTMAVVTFHPQHLGQEALAAQKALLKEFFTCGPGAACALTSLYFQESTMTRCSHEQSPFQLLHGEPHIFEDVLDLTFRISPDAFFQVNTSGAEVLYQAVRELSQAATNTVLLDVCCGTGTIGLSLARHVSKVIGVEIVQKAVEDARWNAAFNGISNCEFHSGKAEAVLPELLSSWEDARPLVAVVNPSRAGIHHRVVRAIRSCRAIRRLLYISCKPEGEAMRNFLELCCPPNPRKKLEGEPFAPTLAVPFDMFPHTAHCELVLLLTR
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952582..952708,953477..953576,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,957255..957309,958220..958344,958495..958560))
location: region:952582-958560:-1
so has part: feature:958495-958560:-1:exon
so has part: feature:958220-958344:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:953477-953576:-1:exon
so has part: feature:952582-952708:-1:exon

XP_019473622.1
type: Protein
SIO_000068: ncbiprotein

position:952582:-1
position: 952582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:958495-958560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958220-958344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953477-953576:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952582-952708:-1:exon

TRMT2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRMT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X3
translation: MMLRSEDGKDQRSITPIAALFQPVFLSSLPGWDCRQPTGETAAKRRRRKDGEGCSLPASSWEERLADAATPLWRLSYQEQLQVKYESLMEVLQSLTSHLLELRGGVQDPGGLCCPLQPVVPSPTVNGYRNKSTFSVNRGPDGNPKTVGLYVGTGRARNIVCVRTDHMKNIPLKHKQVAQCYEQFIRRSPLGSCILFHEGGHWRELVVRTSQHGHTMAVVTFHPQHLGQEALAAQKALLKEFFTCGPGAACALTSLYFQESTMTRCSHEQSPFQLLHGEPHIFEDVLDLTFRISPDAFFQVNTSGAEVLYQAVRELSQAATNTVLLDVCCGTGTIGLSLARHVSKVIGVEIVQKAVEDARWNAAFNGISNCEFHSGKAEAVLPELLSSWEDARPLVAVVNPSRAGIHHRVVRAIRSCRAIRRLLYISCKPEGEAMRNFLELCCPPNPRKKLEGEPFAPTLAVPFDMFPHTAHCELVLLLTR
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952582..952708,953477..953576,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,956740..956859,957255..957309,958220..958344,958495..958560))
location: region:952582-958560:-1
so has part: feature:958495-958560:-1:exon
so has part: feature:958220-958344:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956740-956859:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:953477-953576:-1:exon
so has part: feature:952582-952708:-1:exon

XP_019473620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:958495-958560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:958220-958344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956740-956859:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:953477-953576:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:952582-952708:-1:exon

TRMT2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TRMT2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (uracil(54)-C(5))-methyltransferase homolog isoform X4
translation: MALPHASMLTRRCLRLLTPQPVFLSSLPGWDCRQPTGETAAKRRRRKDGEGCSLPASSWEERLADAATPLWRLSYQEQLQVKYESLMEVLQSLTSHLLELRGGVQDPGGLCCPLQPVVPSPTVNGYRNKSTFSVNRGPDGNPKTVGLYVGTGRARNIVCVRTDHMKNIPLKHKQVAQCYEQFIRRSPLGSCILFHEGGHWRELVVRTSQHGHTMAVVTFHPQHLGQEALAAQKALLKEFFTCGPGAACALTSLYFQESTMTRCSHEQSPFQLLHGEPHIFEDVLDLTFRISPDAFFQVNTSGAEVLYQAVRELSQAATNTVLLDVCCGTGTIGLSLARHVSKVIGVEIVQKAVEDARWNAAFNGISNCEFHSGKAEAVLPELLSSWEDARPLVAVVNPSRAGIHHRVVRAIRSCRAIRRLLYISCKPEGEAMRNFLELCCPPNPRKKLEGEPFAPTLAVPFDMFPHTAHCELVLLLTR
SIO_010081: TRMT2B
subclass of: SO_0000673
so part of: TRMT2B
location: complement(join(952582..952708,953477..953576,953844..953963,954082..954183,954425..954639,955134..955228,955322..955468,955908..955978,956164..956263,956740..956859,957255..957309,958220..958404))
location: region:952582-958404:-1
so has part: feature:958220-958404:-1:exon
so has part: feature:957255-957309:-1:exon
so has part: feature:956740-956859:-1:exon
so has part: feature:956164-956263:-1:exon
so has part: feature:955908-955978:-1:exon
so has part: feature:955322-955468:-1:exon
so has part: feature:955134-955228:-1:exon
so has part: feature:954425-954639:-1:exon
so has part: feature:954082-954183:-1:exon
so has part: feature:953844-953963:-1:exon
so has part: feature:953477-953576:-1:exon
so has part: feature:952582-952708:-1:exon

XP_010713318.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:958220-958404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:957255-957309:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:956740-956859:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:956164-956263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955908-955978:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955322-955468:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:955134-955228:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:954425-954639:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:954082-954183:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:953844-953963:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:953477-953576:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:952582-952708:-1:exon

LOC104912110
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC104912110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(960797..963374)
location: region:960797-963374:-1
so has part: feature:960797-963374:-1:exon
subclass of: SO_0000010

104912110
type: Gene
SIO_000068: ncbigene

position:960797:-1
position: 960797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963374:-1
position: 963374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960797-963374:-1:exon

LOC104912110
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC104912110
product: probable G-protein coupled receptor 34
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019618078.2
SIO_010081: LOC104912110
subclass of: SO_0000673
so part of: LOC104912110
location: complement(join(960797..962284,963282..963374))
location: region:960797-963374:-1
so has part: feature:963282-963374:-1:exon
so has part: feature:960797-962284:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963282-963374:-1:exon

position:963282:-1
position: 963282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:960797-962284:-1:exon

position:962284:-1
position: 962284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC104912110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC104912110
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable G-protein coupled receptor 34
translation: MDPQSTPPPAIEVTQQLLGNSCCQIHDGFLSVTLPVMYSLIFAIGLLSNVLALWVFSFSIQRQTSITVYMRNLALSDLLLALCLPFRIAFQDRSEPRVFCNIVGAFFYLNMYVSITFLSLISLDRYLKIIRPLQKYRIHSVSCSTLASGMVWVVNFAFMLPFFFEKRGKGPCDHKCFHFRSKSTMAAAFNMAAVAAFFIVLLLFLYFYSKIFAKLHQVSSVKAQQLNKKTSTRAITKTFVVLIIFIVCFTPYHTVRIPYILAQIEAISSLPWKQGLHLANELVLCISALNSCLDPIIFFFLSSSFRRAVLCTIQGRLKGALLSNQGRLTPSRSVTEL
SIO_010081: LOC104912110
subclass of: SO_0000673
so part of: LOC104912110
location: complement(961232..962245)
location: region:961232-962245:-1
so has part: feature:961232-962245:-1:exon

XP_019473623.1
type: Protein
SIO_000068: ncbiprotein

position:961232:-1
position: 961232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962245:-1
position: 962245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:961232-962245:-1:exon

LOC109369012
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC109369012
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(966617..972997)
location: region:966617-972997:-1
so has part: feature:966617-972997:-1:exon
subclass of: SO_0000011

109369012
type: Gene
SIO_000068: ncbigene

position:966617:-1
position: 966617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972997:-1
position: 972997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:966617-972997:-1:exon

LOC109369012
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9103
nc RNA class: lncRNA
gene: LOC109369012
product: uncharacterized LOC109369012
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 205 samples with support for all annotated introns
transcript id: XR_002117567.2
SIO_010081: LOC109369012
subclass of: SO_0000673
so part of: LOC109369012
location: complement(join(966617..971749,972364..972997))
location: region:966617-972997:-1
so has part: feature:972364-972997:-1:exon
so has part: feature:966617-971749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:972364-972997:-1:exon

position:972364:-1
position: 972364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:966617-971749:-1:exon

position:971749:-1
position: 971749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TAF7L
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: TAF7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 976124..981703
location: region:976124-981703:1
so has part: feature:976124-981703:1:exon
subclass of: SO_0000010

100548284
type: Gene
SIO_000068: ncbigene

position:976124:1
position: 976124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981703:1
position: 981703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976124-981703:1:exon

TAF7L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TAF7L
product: TATA-box binding protein associated factor 7 like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 182 samples with support for all annotated introns
transcript id: XM_019618081.2
SIO_010081: TAF7L
subclass of: SO_0000673
so part of: TAF7L
location: join(976124..976203,976320..976401,977692..977770,977877..978010,978271..978397,978592..978650,979680..979752,980133..980249,980427..980812,981099..981158,981305..981703)
location: region:976124-981703:1
so has part: feature:976124-976203:1:exon
so has part: feature:976320-976401:1:exon
so has part: feature:977692-977770:1:exon
so has part: feature:977877-978010:1:exon
so has part: feature:978271-978397:1:exon
so has part: feature:978592-978650:1:exon
so has part: feature:979680-979752:1:exon
so has part: feature:980133-980249:1:exon
so has part: feature:980427-980812:1:exon
so has part: feature:981099-981158:1:exon
so has part: feature:981305-981703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:976124-976203:1:exon

position:976203:1
position: 976203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:976320-976401:1:exon

position:976320:1
position: 976320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976401:1
position: 976401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:977692-977770:1:exon

position:977692:1
position: 977692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977770:1
position: 977770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:977877-978010:1:exon

position:977877:1
position: 977877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978010:1
position: 978010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:978271-978397:1:exon

position:978271:1
position: 978271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978397:1
position: 978397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:978592-978650:1:exon

position:978592:1
position: 978592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978650:1
position: 978650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:979680-979752:1:exon

position:979680:1
position: 979680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979752:1
position: 979752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:980133-980249:1:exon

position:980133:1
position: 980133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980249:1
position: 980249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:980427-980812:1:exon

position:980427:1
position: 980427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980812:1
position: 980812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:981099-981158:1:exon

position:981099:1
position: 981099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981158:1
position: 981158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:981305-981703:1:exon

position:981305:1
position: 981305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TAF7L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: TAF7L
product: TATA-box binding protein associated factor 7 like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 222 samples with support for all annotated introns
transcript id: XM_003205609.4
SIO_010081: TAF7L
subclass of: SO_0000673
so part of: TAF7L
location: join(976146..976401,977692..977770,977877..978010,978271..978397,978592..978650,979680..979752,980133..980249,980427..980615,980700..980812,981099..981158,981305..981703)
location: region:976146-981703:1
so has part: feature:976146-976401:1:exon
so has part: feature:977692-977770:1:exon
so has part: feature:977877-978010:1:exon
so has part: feature:978271-978397:1:exon
so has part: feature:978592-978650:1:exon
so has part: feature:979680-979752:1:exon
so has part: feature:980133-980249:1:exon
so has part: feature:980427-980615:1:exon
so has part: feature:980700-980812:1:exon
so has part: feature:981099-981158:1:exon
so has part: feature:981305-981703:1:exon

position:976146:1
position: 976146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976146-976401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977692-977770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977877-978010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978271-978397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978592-978650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979680-979752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:980133-980249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:980427-980615:1:exon

position:980615:1
position: 980615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:980700-980812:1:exon

position:980700:1
position: 980700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:981099-981158:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981305-981703:1:exon

TAF7L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TAF7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 7-like isoform X1
translation: MSKSKDDAPHELESQFVLRLPPEYASTVRRAVQSGSVNLKDRLTIELHADGRHGIVRVDRVPLAAKLVDLPCIIESLKTIDKKTFYKTADICQMLVCTVDGDLYPPLEEQTVSTDPKANKKKDKDREKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAVSVRWEVIAEDETKEVDNHGSLTSLDISSPGMSGHKQGHGSSEHDELREIFNDISSSSEDEDERDHHDDEDLNIMDTEEDLERQLQDKPNESDGQQQENEGSNQIGESGGNAAESLGCRAAQPLLQVSAHSLPVMGIQKQIDNLKSKLQETQDRRKRQEDLIMKVENLALKTRLQAVLDEFKQQEEREKQQMTSLQEQLESLMEK
SIO_010081: TAF7L
subclass of: SO_0000673
so part of: TAF7L
location: join(976336..976401,977692..977770,977877..978010,978271..978397,978592..978650,979680..979752,980133..980249,980427..980812,981099..981158,981305..981349)
location: region:976336-981349:1
so has part: feature:976336-976401:1:exon
so has part: feature:977692-977770:1:exon
so has part: feature:977877-978010:1:exon
so has part: feature:978271-978397:1:exon
so has part: feature:978592-978650:1:exon
so has part: feature:979680-979752:1:exon
so has part: feature:980133-980249:1:exon
so has part: feature:980427-980812:1:exon
so has part: feature:981099-981158:1:exon
so has part: feature:981305-981349:1:exon

XP_019473626.1
type: Protein
SIO_000068: ncbiprotein

position:976336:1
position: 976336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981349:1
position: 981349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976336-976401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977692-977770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977877-978010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978271-978397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978592-978650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979680-979752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:980133-980249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:980427-980812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:981099-981158:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981305-981349:1:exon

TAF7L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: TAF7L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription initiation factor TFIID subunit 7-like isoform X2
translation: MSKSKDDAPHELESQFVLRLPPEYASTVRRAVQSGSVNLKDRLTIELHADGRHGIVRVDRVPLAAKLVDLPCIIESLKTIDKKTFYKTADICQMLVCTVDGDLYPPLEEQTVSTDPKANKKKDKDREKKFIWNHGITLPLKNVRKRRFRKTAKKKYIESPDVEKEVKRLLSTDAEAVSVRWEVIAEDETKEVDNHGSLTSLDISSPGMSGHKQGHGSSEHDELREIFNDISSSSEDEDERDHHDDEDLNIMDTEEDLERQLQDKPNESDGQQQENEGSNQIVMGIQKQIDNLKSKLQETQDRRKRQEDLIMKVENLALKTRLQAVLDEFKQQEEREKQQMTSLQEQLESLMEK
SIO_010081: TAF7L
subclass of: SO_0000673
so part of: TAF7L
location: join(976336..976401,977692..977770,977877..978010,978271..978397,978592..978650,979680..979752,980133..980249,980427..980615,980700..980812,981099..981158,981305..981349)
location: region:976336-981349:1
so has part: feature:976336-976401:1:exon
so has part: feature:977692-977770:1:exon
so has part: feature:977877-978010:1:exon
so has part: feature:978271-978397:1:exon
so has part: feature:978592-978650:1:exon
so has part: feature:979680-979752:1:exon
so has part: feature:980133-980249:1:exon
so has part: feature:980427-980615:1:exon
so has part: feature:980700-980812:1:exon
so has part: feature:981099-981158:1:exon
so has part: feature:981305-981349:1:exon

XP_003205657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:976336-976401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:977692-977770:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977877-978010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978271-978397:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978592-978650:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:979680-979752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:980133-980249:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:980427-980615:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:980700-980812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:981099-981158:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:981305-981349:1:exon

LOC100540222
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: LOC100540222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 982017..985533
location: region:982017-985533:1
so has part: feature:982017-985533:1:exon
subclass of: SO_0000010

100540222
type: Gene
SIO_000068: ncbigene

position:982017:1
position: 982017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985533:1
position: 985533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982017-985533:1:exon

LOC100540222
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: LOC100540222
product: aryl-hydrocarbon-interacting protein-like 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031554720.1
SIO_010081: LOC100540222
subclass of: SO_0000673
so part of: LOC100540222
location: join(982017..982326,982851..983030,983134..983322,983388..983564,983662..983803,984188..984768,985279..985533)
location: region:982017-985533:1
so has part: feature:982017-982326:1:exon
so has part: feature:982851-983030:1:exon
so has part: feature:983134-983322:1:exon
so has part: feature:983388-983564:1:exon
so has part: feature:983662-983803:1:exon
so has part: feature:984188-984768:1:exon
so has part: feature:985279-985533:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982017-982326:1:exon

position:982326:1
position: 982326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982851-983030:1:exon

position:982851:1
position: 982851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983030:1
position: 983030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:983134-983322:1:exon

position:983134:1
position: 983134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983322:1
position: 983322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:983388-983564:1:exon

position:983388:1
position: 983388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983564:1
position: 983564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:983662-983803:1:exon

position:983662:1
position: 983662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983803:1
position: 983803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:984188-984768:1:exon

position:984188:1
position: 984188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:984768:1
position: 984768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:985279-985533:1:exon

position:985279:1
position: 985279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100540222
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: LOC100540222
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: aryl-hydrocarbon-interacting protein-like 1
translation: MEETYLLNVEGVRKKILHGGQGELPKFQDGSKITFHFQTLKDNFERTVIDDSREAGMPMEIIVGKMFKIEIWETLLCSMRTGEVAEFWCDAIHTGMYALVSKGMRRIAEGRDPLEGQKHRCGMGNMFDYHSTGYDDLDELQRTPQPLIFIMELFRVEEPSAYKRDTWAMSKEEKLAAVPVLHSEGNRLVLQKEFQRAAEKYQEAVICLRNLQAKEKPWEEGWLKLESLVTPLVLNYCQCQLELGEYYEVLEHTTELLQKHHDNAKAYFKRAKAHAAVWNEREAREDFLRVAHLDPAMAAAVKKELKLLGERMRKKHVEDRKRYQGLFQQPRGGRAGMGGGRQEEVGCHEGEQGMGMGEAGVGEGERGMAGDGCGKEAWGRGTVPGEAEVVGNGVGQGGEVKLGVCRAELESCGAEREVEGWEEEEKEVVEEDEGKVMVEEEKNEIEEKEEEAVKEGELEKGSCGGQQADNFTSTNTTNGAVLQAGPSGADVELDGGTEMPPYLTSAEERGGAASGLEAPLEQCRESRELEAAAMGHGQA
SIO_010081: LOC100540222
subclass of: SO_0000673
so part of: LOC100540222
location: join(982231..982326,982851..983030,983134..983322,983388..983564,983662..983803,984188..984768,985279..985533)
location: region:982231-985533:1
so has part: feature:982231-982326:1:exon
so has part: feature:982851-983030:1:exon
so has part: feature:983134-983322:1:exon
so has part: feature:983388-983564:1:exon
so has part: feature:983662-983803:1:exon
so has part: feature:984188-984768:1:exon
so has part: feature:985279-985533:1:exon

XP_031410580.1
type: Protein
SIO_000068: ncbiprotein

position:982231:1
position: 982231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:982231-982326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:982851-983030:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:983134-983322:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:983388-983564:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:983662-983803:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:984188-984768:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:985279-985533:1:exon

DRP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: DRP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(986476..1001517)
location: region:986476-1001517:-1
so has part: feature:986476-1001517:-1:exon
subclass of: SO_0000010

100540066
type: Gene
SIO_000068: ncbigene

position:986476:-1
position: 986476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1001517:-1
position: 1001517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:986476-1001517:-1:exon

DRP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9103
gene: DRP2
product: dystrophin related protein 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_010715023.3
SIO_010081: DRP2
subclass of: SO_0000673
so part of: DRP2
location: complement(join(986476..987849,988353..988442,988513..988633,988714..988951,989396..989539,989674..989739,989939..990004,990290..990426,990642..990753,990843..991009,991095..991252,991779..991864,992018..992219,992948..993022,993220..993281,993525..993585,994071..994149,994413..994559,994721..994989,995199..995319,995514..995670,996053..996186,998845..1001517))
location: region:986476-1001517:-1
so has part: feature:998845-1001517:-1:exon
so has part: feature:996053-996186:-1:exon
so has part: feature:995514-995670:-1:exon
so has part: feature:995199-995319:-1:exon
so has part: feature:994721-994989:-1:exon
so has part: feature:994413-994559:-1:exon
so has part: feature:994071-994149:-1:exon
so has part: feature:993525-993585:-1:exon
so has part: feature:993220-993281:-1:exon
so has part: feature:992948-993022:-1:exon
so has part: feature:992018-992219:-1:exon
so has part: feature:991779-991864:-1:exon
so has part: feature:991095-991252:-1:exon
so has part: feature:990843-991009:-1:exon
so has part: feature:990642-990753:-1:exon
so has part: feature:990290-990426:-1:exon
so has part: feature:989939-990004:-1:exon
so has part: feature:989674-989739:-1:exon
so has part: feature:989396-989539:-1:exon
so has part: feature:988714-988951:-1:exon
so has part: feature:988513-988633:-1:exon
so has part: feature:988353-988442:-1:exon
so has part: feature:986476-987849:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:998845-1001517:-1:exon

position:998845:-1
position: 998845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:996053-996186:-1:exon

position:996053:-1
position: 996053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996186:-1
position: 996186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:995514-995670:-1:exon

position:995514:-1
position: 995514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995670:-1
position: 995670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:995199-995319:-1:exon

position:995199:-1
position: 995199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995319:-1
position: 995319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:994721-994989:-1:exon

position:994721:-1
position: 994721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994989:-1
position: 994989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:994413-994559:-1:exon

position:994413:-1
position: 994413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994559:-1
position: 994559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:994071-994149:-1:exon

position:994071:-1
position: 994071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:994149:-1
position: 994149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:993525-993585:-1:exon

position:993525:-1
position: 993525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993585:-1
position: 993585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:993220-993281:-1:exon

position:993220:-1
position: 993220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993281:-1
position: 993281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:992948-993022:-1:exon

position:992948:-1
position: 992948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993022:-1
position: 993022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:992018-992219:-1:exon

position:992018:-1
position: 992018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:992219:-1
position: 992219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:991779-991864:-1:exon

position:991779:-1
position: 991779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991864:-1
position: 991864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:991095-991252:-1:exon

position:991095:-1
position: 991095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991252:-1
position: 991252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:990843-991009:-1:exon

position:990843:-1
position: 990843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991009:-1
position: 991009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:990642-990753:-1:exon

position:990642:-1
position: 990642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:990753:-1
position: 990753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:990290-990426:-1:exon