Meleagris gallopavo mitochondrion, complete genome.
type: Entry
definition: Meleagris gallopavo mitochondrion, complete genome.
sequence version: NC_010195.2
sequence date: 2023-04-03
sequence: sequence
division: VRT
label: NC_010195.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Meleagris gallopavo (turkey)
organism: Meleagris gallopavo
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Meleagridinae; Meleagris.
reference: 1
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to JF275060.\n\nOn Feb 22, 2011 this sequence version replaced NC_010195.1.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16719
topology: circular
so has quality: SO_0000988
location: 1..16719
location: region:1-16719:1
RO_0002162: 9103

NC_010195
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Mitochondrial genome of Nici, the DNA source for the turkey whole genome sequence
author: Reed, K.M.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (22-FEB-2011) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Reed, K.M.
journal: Submitted (28-JAN-2011) Veterinary and Biomedical Sciences, University of Minnesota, 295 ASVM, 1988 Fitch Ave, St. Paul, MN 55108, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16719:1
position: 16719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16719:1:source
so part of: sequence
organism: Meleagris gallopavo
organelle: mitochondrion
mol type: genomic DNA
strain: Nicholas
clone: NT-WF06-2002-E0010

9103
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Phe
so part of: sequence
location: 1..67
location: region:1-67:1
so has part: feature:1-67:1:region

position:67:1
position: 67
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-67:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 9103
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: 68..1040
location: region:68-1040:1
so has part: feature:68-1040:1:region

position:68:1
position: 68
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040:1
position: 1040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:68-1040:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Val
so part of: sequence
location: 1041..1113
location: region:1041-1113:1
so has part: feature:1041-1113:1:region

position:1041:1
position: 1041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113:1
position: 1113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041-1113:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 9103
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: 1114..2731
location: region:1114-2731:1
so has part: feature:1114-2731:1:region

position:1114:1
position: 1114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2731:1
position: 2731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114-2731:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Leu
so part of: sequence
location: 2732..2805
location: region:2732-2805:1
so has part: feature:2732-2805:1:region

position:2732:1
position: 2732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2805:1
position: 2805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2732-2805:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ND1
so part of: sequence
location: 2821..3795
location: region:2821-3795:1
so has part: feature:2821-3795:1:exon
subclass of: SO_0000010

5848011
type: Gene
SIO_000068: ncbigene

position:2821:1
position: 2821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3795:1
position: 3795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2821-3795:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ND1
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MTSPTLTNLLTMTLSYMIPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILALLLALTIWTPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLATIMLSGNYTLSTLATTQEPIYLIFPAWPLTMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTTILFLNPSFLNLPSELFSITLATKVLLLSSTFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHASMPISYAGLPPI
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2821..3795
location: region:2821-3795:1
so has part: feature:2821-3795:1:exon

YP_004243708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2821-3795:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Ile
so part of: sequence
location: 3796..3867
location: region:3796-3867:1
so has part: feature:3796-3867:1:region

position:3796:1
position: 3796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3867:1
position: 3867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3796-3867:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Gln
so part of: sequence
location: complement(3876..3945)
location: region:3876-3945:-1
so has part: feature:3876-3945:-1:region

position:3876:-1
position: 3876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3945:-1
position: 3945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3876-3945:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Met
so part of: sequence
location: 3945..4013
location: region:3945-4013:1
so has part: feature:3945-4013:1:region

position:3945:1
position: 3945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4013:1
position: 4013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3945-4013:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ND2
so part of: sequence
location: 4014..5053
location: region:4014-5053:1
so has part: feature:4014-5053:1:exon
subclass of: SO_0000010

5848009
type: Gene
SIO_000068: ncbigene

position:4014:1
position: 4014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5053:1
position: 5053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4014-5053:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5052..5053,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPHAKLISTMSLIMGTSITMSSNHWILAWTGLEVNTLAIIPLISKSHHPRAIEAAIKYFLTQSTASALILFSSLTNAWSTGQWDITQLNNPTSCLLLTMAIAIKLGLVPFHFWFPEVLQGSSMTTALLLSTLMKLPPITLLFMSSQSLNPALLTTLAISSALVGGWMGLNQTQTRKILAFSSISHLGWMIAIIIYDPHLTILTFALYSLMTTTMFLSLTQIKVLKLSTMLISWTKTPMLNATMMLALLSLAGLPPLTGFMPKWLIIQELTKQGMTPTATTITLLSLLGLFFYLRLAYHSTIMLPPNSSNHMKLWRTNKASNTPTAILSTLSISLLPMTPLITTMF
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 4014..5053
location: region:4014-5053:1
so has part: feature:4014-5053:1:exon

YP_004243709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4014-5053:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Trp
so part of: sequence
location: 5054..5131
location: region:5054-5131:1
so has part: feature:5054-5131:1:region

position:5054:1
position: 5054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5131:1
position: 5131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5054-5131:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Ala
so part of: sequence
location: complement(5138..5205)
location: region:5138-5205:-1
so has part: feature:5138-5205:-1:region

position:5138:-1
position: 5138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5205:-1
position: 5205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5138-5205:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Asn
so part of: sequence
location: complement(5209..5280)
location: region:5209-5280:-1
so has part: feature:5209-5280:-1:region

position:5209:-1
position: 5209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5280:-1
position: 5280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5209-5280:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Cys
so part of: sequence
location: complement(5283..5347)
location: region:5283-5347:-1
so has part: feature:5283-5347:-1:region

position:5283:-1
position: 5283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5347:-1
position: 5347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5283-5347:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Tyr
so part of: sequence
location: complement(5347..5417)
location: region:5347-5417:-1
so has part: feature:5347-5417:-1:region

position:5417:-1
position: 5417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5347-5417:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: COX1
so part of: sequence
location: 5419..6969
location: region:5419-6969:1
so has part: feature:5419-6969:1:exon
subclass of: SO_0000010

5848012
type: Gene
SIO_000068: ncbigene

position:5419:1
position: 5419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6969:1
position: 6969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5419-6969:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MTFINRWLFSTNHKDIGTLYLIFGTWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLASNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVAYYAGKKEPFGYMGMVWAMLSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGTIKWDPPMLWALGFIFLFTIGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGFTLHPSWTKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTLSSIGSLISMTAVIMLMFIVWEAFSAKRKVLHPELTSTNIEWIHGCPPPYHTFEEPAFVQVQE
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5419..6969
location: region:5419-6969:1
so has part: feature:5419-6969:1:exon

YP_004243710.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5419-6969:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Ser
so part of: sequence
location: complement(6962..7035)
location: region:6962-7035:-1
so has part: feature:6962-7035:-1:region

position:6962:-1
position: 6962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7035:-1
position: 7035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6962-7035:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Asp
so part of: sequence
location: 7038..7106
location: region:7038-7106:1
so has part: feature:7038-7106:1:region

position:7038:1
position: 7038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7106:1
position: 7106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7038-7106:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: COX2
so part of: sequence
location: 7108..7791
location: region:7108-7791:1
so has part: feature:7108-7791:1:exon
subclass of: SO_0000010

5848004
type: Gene
SIO_000068: ncbigene

position:7108:1
position: 7108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7791:1
position: 7791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7108-7791:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: COX2
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MANHSQLGFQDASSPIMEELVEFHDHALMVALAICSLVLYLLTLMLMEKLSSNTVDAQEIELIWTILPAIVLVLLALPSLQILYMMDEVNEPDLTLKAIGHQWYWTYEYTDFKDLSFDSYMTPTMDLPQGHFRLLEVDHRMVVPMESPIRMIITADDVLHSWAVPTLGVKTDAIPGRLNQTSFITTRPGVFYGQCSEICGANHSFMPIVVESTPLKYFEAWSSLLSS
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7108..7791
location: region:7108-7791:1
so has part: feature:7108-7791:1:exon

YP_004243711.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7108-7791:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Lys
so part of: sequence
location: 7793..7861
location: region:7793-7861:1
so has part: feature:7793-7861:1:region

position:7793:1
position: 7793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7861:1
position: 7861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7793-7861:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ATP8
so part of: sequence
location: 7863..8027
location: region:7863-8027:1
so has part: feature:7863-8027:1:exon
subclass of: SO_0000010

5848000
type: Gene
SIO_000068: ncbigene

position:7863:1
position: 7863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8027:1
position: 8027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7863-8027:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPNPWFTIMLLTWFTYSFLIQPKLLSFTPTNNPMNKPSTTKPIPWTWPWT
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7863..8027
location: region:7863-8027:1
so has part: feature:7863-8027:1:exon

YP_004243712.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7863-8027:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ATP6
so part of: sequence
location: 8018..8701
location: region:8018-8701:1
so has part: feature:8018-8701:1:exon
subclass of: SO_0000010

5848003
type: Gene
SIO_000068: ncbigene

position:8018:1
position: 8018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8701:1
position: 8701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8018-8701:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNLSFFDQFSSPYLLGIPLILPSLLLPALLLPSPGRRWVNNRFSTIQLWLIHLITKQLMTPLNKAGHKWALLLTSLILLLLSINLLGLLPYTFTPTTQLSMNMALALPLWLATLLIGLRNQPSASLGHLLPEGTPTPLIPALILIETTSLLIRPLALGVRLTANLTAGHLLIQLISTATIALLPLMPSISILTALILFLLTILEVAVAMIQAYVFVLLLSLYLQENI
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 8018..8701
location: region:8018-8701:1
so has part: feature:8018-8701:1:exon

YP_004243713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8018-8701:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: COX3
so part of: sequence
location: 8701..9487
location: region:8701-9487:1
so has part: feature:8701-9487:1:exon
subclass of: SO_0000010

5848010
type: Gene
SIO_000068: ncbigene

position:9487:1
position: 9487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8701-9487:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9484,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHSYHMVDPSPWPIFGAAAALLTTSGLIMWFHYNTSTLLMAGLLSMLLVMLQWWRDVIRESTFQGHHTPTVQKGLRYGMILFITSEVFFFLGFFWAFFHSSLAPTPELGGQWPPTGINPLNPLDVPLLNTAILLASGVTVTWAHHSITEGNRKQAIHALTLTIALGLYFTALQAMEYHETSFSIADSIYGSTFFVATGFHGLHVIIGSSFLTVCLLRLIKFHFTSNHHFGFEAAAWYWHFVDIVWLFLYMSMYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8701..9484
location: region:8701-9484:1
so has part: feature:8701-9484:1:exon

YP_004243714.1
type: Protein
SIO_000068: ncbiprotein

position:9484:1
position: 9484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8701-9484:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Gly
so part of: sequence
location: 9485..9553
location: region:9485-9553:1
so has part: feature:9485-9553:1:region

position:9485:1
position: 9485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9553:1
position: 9553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9485-9553:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ND3
so part of: sequence
location: 9554..9905
location: region:9554-9905:1
so has part: feature:9554-9905:1:exon
subclass of: SO_0000010

5848008
type: Gene
SIO_000068: ncbigene

position:9554:1
position: 9554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9905:1
position: 9905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9554-9905:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ND3
note: frameshift mechanism unknown (Mindell et al., 1998, Mol. Biol. Evol., 15:1568-1571)
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNTLTFMLSLSFMLSTALTILNFLLAQTTPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLQSPITTLTWTITIISLLTLGLTYEWTQGGLEWAE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: join(9554..9726,9728..9905)
location: region:9554-9905:1
so has part: feature:9554-9726:1:exon
so has part: feature:9728-9905:1:exon

YP_004243715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9554-9726:1:exon

position:9726:1
position: 9726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9728-9905:1:exon

position:9728:1
position: 9728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Arg
so part of: sequence
location: 9907..9974
location: region:9907-9974:1
so has part: feature:9907-9974:1:region

position:9907:1
position: 9907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9974:1
position: 9974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9907-9974:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ND4L
so part of: sequence
location: 9975..10271
location: region:9975-10271:1
so has part: feature:9975-10271:1:exon
subclass of: SO_0000010

5848001
type: Gene
SIO_000068: ncbigene

position:9975:1
position: 9975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10271:1
position: 10271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9975-10271:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MSPLHFSFYSAFTFSSLGLAFHRTHLISALLCLESMMLSMFIPLSMWSIENQTPSFTLVPILMLAFSACEAATGLAMLVASTRTYGSDHLHNLNLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 9975..10271
location: region:9975-10271:1
so has part: feature:9975-10271:1:exon

YP_004243716.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9975-10271:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ND4
so part of: sequence
location: 10265..11642
location: region:10265-11642:1
so has part: feature:10265-11642:1:exon
subclass of: SO_0000010

5848007
type: Gene
SIO_000068: ncbigene

position:10265:1
position: 10265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11642:1
position: 11642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10265-11642:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11642,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKIILPTIMLLPMTLLSPAKFMWTNTTAHSLMIALISLHWLTPSYYPLKNLTSWTGADQISTPLLVLSCWFLPLMIMASQGHLQHEPHLRKQMFISTLIIIQPFIILAFSSTELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLISIIYLHSKTGTLHLPILKLTHPNSTASWTNLLSNLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTLLMQPVCNYLHFPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILILTRGLQPLLPLMATWWLLANLTNMALPPTTNLMAELTIMIALFNWSPPTIILTGTATLLTASYTLYMLLSTQRGTLPTHIMSTPNSNTREHLLMILHIIPMLALILKPELISGTPL
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10265..11642
location: region:10265-11642:1
so has part: feature:10265-11642:1:exon

YP_004243717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10265-11642:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-His
so part of: sequence
location: 11643..11711
location: region:11643-11711:1
so has part: feature:11643-11711:1:region

position:11643:1
position: 11643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11711:1
position: 11711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11643-11711:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Ser
so part of: sequence
location: 11713..11777
location: region:11713-11777:1
so has part: feature:11713-11777:1:region

position:11713:1
position: 11713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11777:1
position: 11777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11713-11777:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Leu
so part of: sequence
location: 11779..11849
location: region:11779-11849:1
so has part: feature:11779-11849:1:region

position:11779:1
position: 11779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11849:1
position: 11849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11779-11849:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ND5
so part of: sequence
location: 11850..13667
location: region:11850-13667:1
so has part: feature:11850-13667:1:exon
subclass of: SO_0000010

5848002
type: Gene
SIO_000068: ncbigene

position:11850:1
position: 11850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13667:1
position: 13667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11850-13667:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MVMVQLLNTFTLLTMLILLTPIILSPLLNLKNSPQLISKTVKTAFLLSLIPTTIFIHSGLESIITYWEWQPTQNFKIPISLKTDLYSMMFLPIALFVTWSILEFATWYMASEPLTTKFFTLLLIFLIAMLTLTIANNMFLLFIGWEGVGIMSFLLIGWWQGRAEANTAALQAMIYNRIGDIGLILSMAWLASTLNTWEIQQAIQPDQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPILSSNKTALTTCLCLGALSTLFAAICALTQNDIKKIIAFSTSSQLGLMMVTIGLNLPQLAFLHISTHAFFKAMLFLCSGLIIHSLNGEQDIRKMGRLQKTLPMTTSCLTIGNLALMGTPFLAGFYSKDLIIENLNTSYINTWALLLTLLATSFTATYSLRMTLLVQTGYNRTLTILPINENTPSAILPVIRLALGSIAAGLLISSLILPTKTPPMTMPIITKTAAIIITTLGIILALELSNMTHSLTPSKQNHLTNFSSSLGYFNLLTHRISPAISLHTGQKIASHLIDMAWYKKMGPEGLANLQLIMSKTSTTLHTGLIKPYLGSFALTILMTILLIQK
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11850..13667
location: region:11850-13667:1
so has part: feature:11850-13667:1:exon

YP_004243718.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11850-13667:1:exon

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: CYTB
so part of: sequence
location: 13671..14813
location: region:13671-14813:1
so has part: feature:13671-14813:1:exon
subclass of: SO_0000010

5848005
type: Gene
SIO_000068: ncbigene

position:13671:1
position: 13671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14813:1
position: 14813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13671-14813:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: CYTB
codon start: 1
transl table: 2
product: cytochrome b
translation: MAPNIRKSHPLLKTINNSLIDLPTPSNISAWWNFGSLLAVCLITQILTGLLLAMHYTADTTLAFSSVAYTCRNVQYGWLLHNLHANGASFFFICIFLHIGRGLYYGSYLYKETWNTGVVLLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFMIAGITIIHLMFLHESGSNNPLGISSNADKIPFHPYYSIKDILGLTIMLTPLLTLTLFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILLLIPFLHKSKQRAMTFRPLSQTLFWLLVANLLILTWVGSQPVEHPFIIIGQMASLSYFTILLILFPLIGALENKMLNL
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 13671..14813
location: region:13671-14813:1
so has part: feature:13671-14813:1:exon

YP_004243719.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13671-14813:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Thr
so part of: sequence
location: 14816..14884
location: region:14816-14884:1
so has part: feature:14816-14884:1:region

position:14816:1
position: 14816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14884:1
position: 14884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14816-14884:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Pro
so part of: sequence
location: complement(14887..14956)
location: region:14887-14956:-1
so has part: feature:14887-14956:-1:region

position:14887:-1
position: 14887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14956:-1
position: 14956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14887-14956:-1:region

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 9103
gene: ND6
so part of: sequence
location: complement(14963..15484)
location: region:14963-15484:-1
so has part: feature:14963-15484:-1:exon
subclass of: SO_0000010

5848006
type: Gene
SIO_000068: ncbigene

position:14963:-1
position: 14963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15484:-1
position: 15484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14963-15484:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9103
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTYFVIFLGICFMLGVLAVASNPSPYYGVVGLVVASVVGCGWLVNLGVSFISLALFMVYLGGMLVVFVYSVSLAADPYPEAWGDWRVVGYGLGFIFVIYVGVVLGELVEYWKVGVLTVDSAGVFFVRLDFSGVAMFYSCGVGLLLVAGWGLLLVLFVVLELVRGLSRGAIRAV
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(14963..15484)
location: region:14963-15484:-1
so has part: feature:14963-15484:-1:exon

YP_004243720.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14963-15484:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9103
product: tRNA-Glu
so part of: sequence
location: complement(15486..15553)
location: region:15486-15553:-1
so has part: feature:15486-15553:-1:region

position:15486:-1
position: 15486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15553:-1
position: 15553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15486-15553:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 9103
note: control region
so part of: sequence
location: 15554..16719
location: region:15554-16719:1
so has part: feature:15554-16719:1:region

position:15554:1
position: 15554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15554-16719:1:region