Gallus gallus isolate bGalGal1 mitochondrion, complete sequence, whole genome shotgun sequence.
type: Entry
definition: Gallus gallus isolate bGalGal1 mitochondrion, complete sequence, whole genome shotgun sequence.
sequence version: NC_053523.1
sequence date: 2023-04-03
sequence: sequence
division: CON
label: NC_053523.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
dblink: SAMN15960293
keyword: WGS
keyword: RefSeq
source: mitochondrion Gallus gallus (chicken)
organism: Gallus gallus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus.
reference: 1
reference: 2
reference: 3
comment: PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to CM028585.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 22-JUL-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n SMRTLink7.0.1; Freebayes v. 1.3.1; gEVAL\n manual curation v. 2020-07-22; VGP trio\n assembly pipeline v. 1.6\nAssembly Name :: bGalGal1.mat.broiler.GRCg7b\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 102.01x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16784
topology: circular
so has quality: SO_0000988
location: 1..16784
location: region:1-16784:1
RO_0002162: 9031

NC_053523
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

SAMN15960293
type: BioSample
SIO_000068: biosample

1
title: Gallus gallus (Chicken) genome, bGalGal1, GRCg7b, maternal haplotype autosomes + Z & W
author: Warren, W.
author: Formenti, G.
author: Fedrigo, O.
author: Haase, B.
author: Mountcastle, J.
author: Balacco, J.
author: Tracey, A.
author: Schneider, V.
author: Okimoto, R.
author: Cheng, H.
author: Hawken, R.
author: Howe, K.
author: Jarvis, E.D.
journal: Unpublished

2
title: Direct Submission
journal: Submitted (25-MAR-2021) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Warren, W.
author: Formenti, G.
author: Fedrigo, O.
author: Haase, B.
author: Mountcastle, J.
author: Balacco, J.
author: Tracey, A.
author: Schneider, V.
author: Okimoto, R.
author: Cheng, H.
author: Hawken, R.
author: Howe, K.
author: Jarvis, E.D.
journal: Submitted (14-NOV-2020) Vertebrate Genomes Project, G10K, 1230 York Avenue, New York, NY 10065, USA

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16784:1
position: 16784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16784:1:source
so part of: sequence
organism: Gallus gallus
organelle: mitochondrion
mol type: genomic DNA
isolate: bGalGal1
sex: female
tissue type: blood
country: USA: Fayetteville
lat lon: 36.0822 N 94.1719 W
collection date: 20-May-2019
collected by: Nick Anthony

9031
type: Taxonomy
SIO_000068: taxonomy

J6367_mgt01
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt01
so part of: sequence
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:exon
subclass of: SO_0000663

63549498
type: Gene
SIO_000068: ncbigene

position:69:1
position: 69
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:exon

J6367_mgt01
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt01
product: tRNA-Phe
SIO_010081: J6367_mgt01
subclass of: SO_0000673
so part of: J6367_mgt01
location: 1..69
location: region:1-69:1
so has part: feature:1-69:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1-69:1:exon

J6367_mgr02
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgr02
so part of: sequence
location: 70..1045
location: region:70-1045:1
so has part: feature:70-1045:1:exon
subclass of: SO_0000573

63549475
type: Gene
SIO_000068: ncbigene

position:70:1
position: 70
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1045:1
position: 1045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:70-1045:1:exon

J6367_mgr02
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 9031
locus tag: J6367_mgr02
product: 12S ribosomal RNA
SIO_010081: J6367_mgr02
subclass of: SO_0000673
so part of: J6367_mgr02
location: 70..1045
location: region:70-1045:1
so has part: feature:70-1045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:70-1045:1:exon

J6367_mgt02
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt02
so part of: sequence
location: 1046..1118
location: region:1046-1118:1
so has part: feature:1046-1118:1:exon
subclass of: SO_0000663

63549476
type: Gene
SIO_000068: ncbigene

position:1046:1
position: 1046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118:1
position: 1118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1046-1118:1:exon

J6367_mgt02
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt02
product: tRNA-Val
SIO_010081: J6367_mgt02
subclass of: SO_0000673
so part of: J6367_mgt02
location: 1046..1118
location: region:1046-1118:1
so has part: feature:1046-1118:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1046-1118:1:exon

J6367_mgr01
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgr01
so part of: sequence
location: 1119..2740
location: region:1119-2740:1
so has part: feature:1119-2740:1:exon
subclass of: SO_0000573

63549477
type: Gene
SIO_000068: ncbigene

position:1119:1
position: 1119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2740:1
position: 2740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1119-2740:1:exon

J6367_mgr01
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 9031
locus tag: J6367_mgr01
product: 16S ribosomal RNA
SIO_010081: J6367_mgr01
subclass of: SO_0000673
so part of: J6367_mgr01
location: 1119..2740
location: region:1119-2740:1
so has part: feature:1119-2740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1119-2740:1:exon

J6367_mgt03
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt03
so part of: sequence
location: 2741..2814
location: region:2741-2814:1
so has part: feature:2741-2814:1:exon
subclass of: SO_0000663

63549478
type: Gene
SIO_000068: ncbigene

position:2741:1
position: 2741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2814:1
position: 2814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2741-2814:1:exon

J6367_mgt03
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt03
product: tRNA-Leu
codon recognized: UUR
SIO_010081: J6367_mgt03
subclass of: SO_0000673
so part of: J6367_mgt03
location: 2741..2814
location: region:2741-2814:1
so has part: feature:2741-2814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2741-2814:1:exon

J6367_mgp13
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ND1
locus tag: J6367_mgp13
so part of: sequence
location: 2824..3798
location: region:2824-3798:1
so has part: feature:2824-3798:1:exon
subclass of: SO_0000010

63549479
type: Gene
SIO_000068: ncbigene

position:2824:1
position: 2824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3798:1
position: 3798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2824-3798:1:exon

J6367_mgp13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ND1
locus tag: J6367_mgp13
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MTLPTLTNLLIMTLSYILPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPVADGVKLFIKEPIRPSTSSPFLFIITPILALLLALTIWVPLPLPFPLADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGNYTLSTLAITQEPIYLIFSAWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFAMFFLAEYANIMLMNTLTTVLFLNPSFLNLPPELFPIALATKTLLLSSSFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGLPPI
SIO_010081: J6367_mgp13
subclass of: SO_0000673
so part of: J6367_mgp13
location: 2824..3798
location: region:2824-3798:1
so has part: feature:2824-3798:1:exon

YP_010037840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2824-3798:1:exon

J6367_mgt04
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt04
so part of: sequence
location: 3799..3870
location: region:3799-3870:1
so has part: feature:3799-3870:1:exon
subclass of: SO_0000663

63549462
type: Gene
SIO_000068: ncbigene

position:3799:1
position: 3799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3870:1
position: 3870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3799-3870:1:exon

J6367_mgt04
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt04
product: tRNA-Ile
SIO_010081: J6367_mgt04
subclass of: SO_0000673
so part of: J6367_mgt04
location: 3799..3870
location: region:3799-3870:1
so has part: feature:3799-3870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3799-3870:1:exon

J6367_mgt05
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt05
so part of: sequence
location: complement(3876..3946)
location: region:3876-3946:-1
so has part: feature:3876-3946:-1:exon
subclass of: SO_0000663

63549480
type: Gene
SIO_000068: ncbigene

position:3876:-1
position: 3876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3946:-1
position: 3946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3876-3946:-1:exon

J6367_mgt05
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt05
product: tRNA-Gln
SIO_010081: J6367_mgt05
subclass of: SO_0000673
so part of: J6367_mgt05
location: complement(3876..3946)
location: region:3876-3946:-1
so has part: feature:3876-3946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3876-3946:-1:exon

J6367_mgt06
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt06
so part of: sequence
location: 3946..4014
location: region:3946-4014:1
so has part: feature:3946-4014:1:exon
subclass of: SO_0000663

63549481
type: Gene
SIO_000068: ncbigene

position:3946:1
position: 3946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4014:1
position: 4014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3946-4014:1:exon

J6367_mgt06
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt06
product: tRNA-Met
SIO_010081: J6367_mgt06
subclass of: SO_0000673
so part of: J6367_mgt06
location: 3946..4014
location: region:3946-4014:1
so has part: feature:3946-4014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3946-4014:1:exon

J6367_mgp12
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ND2
locus tag: J6367_mgp12
so part of: sequence
location: 4015..5053
location: region:4015-5053:1
so has part: feature:4015-5053:1:exon
subclass of: SO_0000010

63549482
type: Gene
SIO_000068: ncbigene

position:4015:1
position: 4015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5053:1
position: 5053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4015-5053:1:exon

J6367_mgp12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ND2
locus tag: J6367_mgp12
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:5053,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPHAKLICTVSLIMGTSITISSNHWILAWTGLEINTLAIIPLISKSHHPRAIEATIKYFLTQSTASALILFSSMTNAWSTGQWDITQLNHPTSCLMLTMAIAIKLGLVPFHFWFPEVLQGSSLITALLLSTLMKLPPITLLLLTSQSLNTTLLTLLAISSTLIGGWMGLNQTQTRKILAFSSISHLGWMIMIISYNPQLTILTFILYTIMTSTVFLSLAQIKVLKLSTMLISWTKTPMLNATVMLTLLSLAGLPPLTGFMPKWLIIQELTKQEMTPMATIITMLSLLSLFFYLRLAYHSTITLPPNSSNHMKLWRTNKTLNTPTAILTALSTTLLPLSPLIITML
SIO_010081: J6367_mgp12
subclass of: SO_0000673
so part of: J6367_mgp12
location: 4015..5053
location: region:4015-5053:1
so has part: feature:4015-5053:1:exon

YP_010037841.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4015-5053:1:exon

J6367_mgt07
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt07
so part of: sequence
location: 5054..5129
location: region:5054-5129:1
so has part: feature:5054-5129:1:exon
subclass of: SO_0000663

63549463
type: Gene
SIO_000068: ncbigene

position:5054:1
position: 5054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5129:1
position: 5129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5054-5129:1:exon

J6367_mgt07
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt07
product: tRNA-Trp
SIO_010081: J6367_mgt07
subclass of: SO_0000673
so part of: J6367_mgt07
location: 5054..5129
location: region:5054-5129:1
so has part: feature:5054-5129:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5054-5129:1:exon

J6367_mgt08
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt08
so part of: sequence
location: complement(5136..5204)
location: region:5136-5204:-1
so has part: feature:5136-5204:-1:exon
subclass of: SO_0000663

63549483
type: Gene
SIO_000068: ncbigene

position:5136:-1
position: 5136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5204:-1
position: 5204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5136-5204:-1:exon

J6367_mgt08
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt08
product: tRNA-Ala
SIO_010081: J6367_mgt08
subclass of: SO_0000673
so part of: J6367_mgt08
location: complement(5136..5204)
location: region:5136-5204:-1
so has part: feature:5136-5204:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5136-5204:-1:exon

J6367_mgt09
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt09
so part of: sequence
location: complement(5208..5280)
location: region:5208-5280:-1
so has part: feature:5208-5280:-1:exon
subclass of: SO_0000663

63549484
type: Gene
SIO_000068: ncbigene

position:5208:-1
position: 5208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5280:-1
position: 5280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5208-5280:-1:exon

J6367_mgt09
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt09
product: tRNA-Asn
SIO_010081: J6367_mgt09
subclass of: SO_0000673
so part of: J6367_mgt09
location: complement(5208..5280)
location: region:5208-5280:-1
so has part: feature:5208-5280:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5208-5280:-1:exon

J6367_mgt10
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt10
so part of: sequence
location: complement(5282..5347)
location: region:5282-5347:-1
so has part: feature:5282-5347:-1:exon
subclass of: SO_0000663

63549485
type: Gene
SIO_000068: ncbigene

position:5282:-1
position: 5282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5347:-1
position: 5347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5282-5347:-1:exon

J6367_mgt10
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt10
product: tRNA-Cys
SIO_010081: J6367_mgt10
subclass of: SO_0000673
so part of: J6367_mgt10
location: complement(5282..5347)
location: region:5282-5347:-1
so has part: feature:5282-5347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5282-5347:-1:exon

J6367_mgt11
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt11
so part of: sequence
location: complement(5347..5417)
location: region:5347-5417:-1
so has part: feature:5347-5417:-1:exon
subclass of: SO_0000663

63549486
type: Gene
SIO_000068: ncbigene

position:5417:-1
position: 5417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5347-5417:-1:exon

J6367_mgt11
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt11
product: tRNA-Tyr
SIO_010081: J6367_mgt11
subclass of: SO_0000673
so part of: J6367_mgt11
location: complement(5347..5417)
location: region:5347-5417:-1
so has part: feature:5347-5417:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5347-5417:-1:exon

J6367_mgp11
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: COX1
locus tag: J6367_mgp11
so part of: sequence
location: 5419..6969
location: region:5419-6969:1
so has part: feature:5419-6969:1:exon
subclass of: SO_0000010

63549487
type: Gene
SIO_000068: ncbigene

position:5419:1
position: 5419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6969:1
position: 6969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5419-6969:1:exon

J6367_mgp11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: COX1
locus tag: J6367_mgp11
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MTFINRWLFSTNHKDIGTLYLIFGTWAGMAGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGVSSILGAINFITTIINMKPPALSQYQTPLFVWSVLITAILLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHVVAYYAGKKEPFGYMGMVWAMLSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGIKVFSWLATLHGGTIKWDPPMLWALGFIFLFTIGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGFTLHPSWTKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPDAYTLWNTLSSIGSLISMTAVIMLMFIVWEAFSAKRKVLQPELTATNIEWIHGCPPPYHTFEEPAFVQVQE
SIO_010081: J6367_mgp11
subclass of: SO_0000673
so part of: J6367_mgp11
location: 5419..6969
location: region:5419-6969:1
so has part: feature:5419-6969:1:exon

YP_010037842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5419-6969:1:exon

J6367_mgt12
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt12
so part of: sequence
location: complement(6961..7035)
location: region:6961-7035:-1
so has part: feature:6961-7035:-1:exon
subclass of: SO_0000663

63549464
type: Gene
SIO_000068: ncbigene

position:6961:-1
position: 6961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7035:-1
position: 7035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6961-7035:-1:exon

J6367_mgt12
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt12
product: tRNA-Ser
codon recognized: UCN
SIO_010081: J6367_mgt12
subclass of: SO_0000673
so part of: J6367_mgt12
location: complement(6961..7035)
location: region:6961-7035:-1
so has part: feature:6961-7035:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6961-7035:-1:exon

J6367_mgt13
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt13
so part of: sequence
location: 7038..7106
location: region:7038-7106:1
so has part: feature:7038-7106:1:exon
subclass of: SO_0000663

63549488
type: Gene
SIO_000068: ncbigene

position:7038:1
position: 7038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7106:1
position: 7106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7038-7106:1:exon

J6367_mgt13
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt13
product: tRNA-Asp
SIO_010081: J6367_mgt13
subclass of: SO_0000673
so part of: J6367_mgt13
location: 7038..7106
location: region:7038-7106:1
so has part: feature:7038-7106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7038-7106:1:exon

J6367_mgp10
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: COX2
locus tag: J6367_mgp10
so part of: sequence
location: 7108..7791
location: region:7108-7791:1
so has part: feature:7108-7791:1:exon
subclass of: SO_0000010

63549489
type: Gene
SIO_000068: ncbigene

position:7108:1
position: 7108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7791:1
position: 7791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7108-7791:1:exon

J6367_mgp10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: COX2
locus tag: J6367_mgp10
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MANHSQLGFQDASSPIMEELVEFHDHALMVALAICSLVLYLLTLMLMEKLSSNTVDAQEVELIWTILPAIVLVLLALPSLQILYMMDEIDEPDLTLKAIGHQWYWTYEYTDFKDLSFDSYMTPTTDLPLGHFRLLEVDHRIVIPMESPIRVIITADDVLHSWAVPALGVKTDAIPGRLNQTSFITTRPGVFYGQCSEICGANHSYMPIVVESTPLKHFEAWSSLLSS
SIO_010081: J6367_mgp10
subclass of: SO_0000673
so part of: J6367_mgp10
location: 7108..7791
location: region:7108-7791:1
so has part: feature:7108-7791:1:exon

YP_010037843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7108-7791:1:exon

J6367_mgt14
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt14
so part of: sequence
location: 7793..7860
location: region:7793-7860:1
so has part: feature:7793-7860:1:exon
subclass of: SO_0000663

63549465
type: Gene
SIO_000068: ncbigene

position:7793:1
position: 7793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7860:1
position: 7860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7793-7860:1:exon

J6367_mgt14
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt14
product: tRNA-Lys
SIO_010081: J6367_mgt14
subclass of: SO_0000673
so part of: J6367_mgt14
location: 7793..7860
location: region:7793-7860:1
so has part: feature:7793-7860:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7793-7860:1:exon

J6367_mgp09
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ATP8
locus tag: J6367_mgp09
so part of: sequence
location: 7862..8026
location: region:7862-8026:1
so has part: feature:7862-8026:1:exon
subclass of: SO_0000010

63549490
type: Gene
SIO_000068: ncbigene

position:7862:1
position: 7862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8026:1
position: 8026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7862-8026:1:exon

J6367_mgp09
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATP8
locus tag: J6367_mgp09
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLNPNPWFSIMLLTWFTFSLLIQPKLLSFTLTNNPANKITTTKPTPWTWPWT
SIO_010081: J6367_mgp09
subclass of: SO_0000673
so part of: J6367_mgp09
location: 7862..8026
location: region:7862-8026:1
so has part: feature:7862-8026:1:exon

YP_010037844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7862-8026:1:exon

J6367_mgp08
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ATP6
locus tag: J6367_mgp08
so part of: sequence
location: 8017..8700
location: region:8017-8700:1
so has part: feature:8017-8700:1:exon
subclass of: SO_0000010

63549466
type: Gene
SIO_000068: ncbigene

position:8017:1
position: 8017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8700:1
position: 8700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8017-8700:1:exon

J6367_mgp08
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ATP6
locus tag: J6367_mgp08
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNLSFFDQFSSPCLLGIPLILPSLLLPALLLPSPGNRWINNRLSTIQLWFTHLITKQLMTPLNKAGHKWALLLTSLILMLLSINLLGLLPYTFTPTTQLSMNMALALPLWLATLLTGLRNQPSASLGHLLPEGTPTPLIPALIMIETTSLLIRPLALGVRLTANLTAGHLLIQLISTATIALLPMMPSISALTALILFLLTILEVAVAMIQAYVFVLLLSLYLQENI
SIO_010081: J6367_mgp08
subclass of: SO_0000673
so part of: J6367_mgp08
location: 8017..8700
location: region:8017-8700:1
so has part: feature:8017-8700:1:exon

YP_010037845.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8017-8700:1:exon

J6367_mgp07
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: COX3
locus tag: J6367_mgp07
so part of: sequence
location: 8700..9483
location: region:8700-9483:1
so has part: feature:8700-9483:1:exon
subclass of: SO_0000010

63549467
type: Gene
SIO_000068: ncbigene

position:9483:1
position: 9483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8700-9483:1:exon

J6367_mgp07
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: COX3
locus tag: J6367_mgp07
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9483,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MAHQAHSYHMVDPSPWPIFGAAAALLTTSGLIMWFHYSSTTLLTMGLLSMLLVMLQWWRDVVRESTFQGHHTPTVQKGLRYGMILFITSEAFFFLGFFWAFFHSSLAPTPELGGQWPPTGVKPLNPLEVPLLNTAILLASGVTVTWAHHSITEGNRKQAIHALTLTILLGFYFTALQAMEYHEASFSIADSVYGSTFFVATGFHGLHVIIGSSFLTVCLLRLIKFHFTPNHHFGFEAAAWYWHFVDIIWLFLYMSMYWWGS
SIO_010081: J6367_mgp07
subclass of: SO_0000673
so part of: J6367_mgp07
location: 8700..9483
location: region:8700-9483:1
so has part: feature:8700-9483:1:exon

YP_010037846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8700-9483:1:exon

J6367_mgt15
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt15
so part of: sequence
location: 9485..9552
location: region:9485-9552:1
so has part: feature:9485-9552:1:exon
subclass of: SO_0000663

63549468
type: Gene
SIO_000068: ncbigene

position:9485:1
position: 9485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9552:1
position: 9552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9485-9552:1:exon

J6367_mgt15
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt15
product: tRNA-Gly
SIO_010081: J6367_mgt15
subclass of: SO_0000673
so part of: J6367_mgt15
location: 9485..9552
location: region:9485-9552:1
so has part: feature:9485-9552:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9485-9552:1:exon

J6367_mgp06
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ND3
locus tag: J6367_mgp06
so part of: sequence
location: 9553..9904
location: region:9553-9904:1
so has part: feature:9553-9904:1:exon
subclass of: SO_0000010

63549491
type: Gene
SIO_000068: ncbigene

position:9553:1
position: 9553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9904:1
position: 9904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9553-9904:1:exon

J6367_mgp06
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ND3
locus tag: J6367_mgp06
note: frameshift mechanism unknown (Mindell et al., 1998, Mol. Biol. Evol., 15:1568-1571)
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNTLTFMLSLSFLLSAALTTMNFWLAQMAPDTEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIQLAHPMMTLTWATTIIALLTFGLIYEWTQGGLEWAE
SIO_010081: J6367_mgp06
subclass of: SO_0000673
so part of: J6367_mgp06
location: join(9553..9725,9727..9904)
location: region:9553-9904:1
so has part: feature:9553-9725:1:exon
so has part: feature:9727-9904:1:exon

YP_010037847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9553-9725:1:exon

position:9725:1
position: 9725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9727-9904:1:exon

position:9727:1
position: 9727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

J6367_mgt16
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt16
so part of: sequence
location: 9906..9973
location: region:9906-9973:1
so has part: feature:9906-9973:1:exon
subclass of: SO_0000663

63549469
type: Gene
SIO_000068: ncbigene

position:9906:1
position: 9906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9973:1
position: 9973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9906-9973:1:exon

J6367_mgt16
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt16
product: tRNA-Arg
SIO_010081: J6367_mgt16
subclass of: SO_0000673
so part of: J6367_mgt16
location: 9906..9973
location: region:9906-9973:1
so has part: feature:9906-9973:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9906-9973:1:exon

J6367_mgp05
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ND4L
locus tag: J6367_mgp05
so part of: sequence
location: 9974..10270
location: region:9974-10270:1
so has part: feature:9974-10270:1:exon
subclass of: SO_0000010

63549492
type: Gene
SIO_000068: ncbigene

position:9974:1
position: 9974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10270:1
position: 10270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9974-10270:1:exon

J6367_mgp05
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ND4L
locus tag: J6367_mgp05
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MSPLHFSFYSAFTFSSLGLAFHRTHLISALLCLESMMLSMFIPLSIWPVENQTPSFALVPILMLAFSACEAGTGLAMLVASARTHGSDHLHNLNLLQC
SIO_010081: J6367_mgp05
subclass of: SO_0000673
so part of: J6367_mgp05
location: 9974..10270
location: region:9974-10270:1
so has part: feature:9974-10270:1:exon

YP_010037848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9974-10270:1:exon

J6367_mgp04
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ND4
locus tag: J6367_mgp04
so part of: sequence
location: 10264..11641
location: region:10264-11641:1
so has part: feature:10264-11641:1:exon
subclass of: SO_0000010

63549470
type: Gene
SIO_000068: ncbigene

position:10264:1
position: 10264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11641:1
position: 11641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10264-11641:1:exon

J6367_mgp04
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ND4
locus tag: J6367_mgp04
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11641,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKIILPTIMLLPTALLSPAKSMWTNTTMYSLLIASISLHWLTPSYYPTKTLTLWTGMDQISTPLLVLSCWFLPLMIMASQGHLQHEPHKRKRMFISTLIIIQPFIILAFSATELMLFYISFEATLIPTLILITRWGNQPERLSAGIYLLFYTLISSLPLLVSILYLHTNTGTLHLPIIKLTHPNLPASWTSLLSSLALLMAFMVKAPLYGLHLWLPKAHVEAPIAGSMLLAALLLKLGGYGIMRVTLLMEPVSNFLHYPFLTLALWGALMTSSICLRQTDLKSLIAYSSVSHMGLVIAASMIQTQWSFSGAMILMISHGLTSSLLFCLANTNYERTHSRILILTRGLQPLLPLMSVWWLLANLTNMALPPTTNLMAELTIMVALFNWSSPTIILTGTATLLTASYTLYMLLSTQRGTLPSHITTTPNSNTREHLLMTLHIIPMLTLILKPELISGTPL
SIO_010081: J6367_mgp04
subclass of: SO_0000673
so part of: J6367_mgp04
location: 10264..11641
location: region:10264-11641:1
so has part: feature:10264-11641:1:exon

YP_010037849.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10264-11641:1:exon

J6367_mgt17
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt17
so part of: sequence
location: 11642..11710
location: region:11642-11710:1
so has part: feature:11642-11710:1:exon
subclass of: SO_0000663

63549471
type: Gene
SIO_000068: ncbigene

position:11642:1
position: 11642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11710:1
position: 11710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11642-11710:1:exon

J6367_mgt17
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt17
product: tRNA-His
SIO_010081: J6367_mgt17
subclass of: SO_0000673
so part of: J6367_mgt17
location: 11642..11710
location: region:11642-11710:1
so has part: feature:11642-11710:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11642-11710:1:exon

J6367_mgt18
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt18
so part of: sequence
location: 11712..11776
location: region:11712-11776:1
so has part: feature:11712-11776:1:exon
subclass of: SO_0000663

63549493
type: Gene
SIO_000068: ncbigene

position:11712:1
position: 11712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11776:1
position: 11776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11712-11776:1:exon

J6367_mgt18
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt18
product: tRNA-Ser
codon recognized: AGY
SIO_010081: J6367_mgt18
subclass of: SO_0000673
so part of: J6367_mgt18
location: 11712..11776
location: region:11712-11776:1
so has part: feature:11712-11776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11712-11776:1:exon

J6367_mgt19
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt19
so part of: sequence
location: 11778..11848
location: region:11778-11848:1
so has part: feature:11778-11848:1:exon
subclass of: SO_0000663

63549494
type: Gene
SIO_000068: ncbigene

position:11778:1
position: 11778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11848:1
position: 11848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11778-11848:1:exon

J6367_mgt19
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt19
product: tRNA-Leu
codon recognized: CUN
SIO_010081: J6367_mgt19
subclass of: SO_0000673
so part of: J6367_mgt19
location: 11778..11848
location: region:11778-11848:1
so has part: feature:11778-11848:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11778-11848:1:exon

J6367_mgp03
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ND5
locus tag: J6367_mgp03
so part of: sequence
location: 11849..13666
location: region:11849-13666:1
so has part: feature:11849-13666:1:exon
subclass of: SO_0000010

63549495
type: Gene
SIO_000068: ncbigene

position:11849:1
position: 11849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13666:1
position: 13666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11849-13666:1:exon

J6367_mgp03
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ND5
locus tag: J6367_mgp03
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: METPLLLNTLTTLTLLTLLTPIILPPLLNLKNSPMSITKTIKTAFLISLIPTTIFIHSGAESIATHWEWQFIPNFKIPISLKMDMYSMMFFPIALFVTWSILEFATWYMASEPFITKFFTYLLTFLIAMLTLTIANNMFLLFVGWEGVGIMSFLLIGWWQGRAEANTAALQAMIYNRIGDIGLILSMAWLASSLNTWEIQQITHPNQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPFLSSNKTALTTCLCLGALSTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLDLPQLAFLHISTHAFFKAMLFLCSGLIIHSLNGEQDIRKMGCLQKTLPMTTSCLTIGNLALMGTPFLAGFYSKDLIIENLNTSYINTWALSLTLLATSFTATYSLRMTLLVQTGHTRTPAITPINENTPPAILPIMRLALGSIMAGLLISSLILPPKTPPMTMPTITKTAAIIVTTLGIILALELSSLSYSLTPPKHNPLMNFSSSLGYFNPLTHRISPSILLHTGQKIASHLIDMAWYKKMGPEGLANLHLTMTKISTTLHTGLIKSYLGSFALTILTTILLIQK
SIO_010081: J6367_mgp03
subclass of: SO_0000673
so part of: J6367_mgp03
location: 11849..13666
location: region:11849-13666:1
so has part: feature:11849-13666:1:exon

YP_010037850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11849-13666:1:exon

J6367_mgp02
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: CYTB
locus tag: J6367_mgp02
so part of: sequence
location: 13671..14813
location: region:13671-14813:1
so has part: feature:13671-14813:1:exon
subclass of: SO_0000010

63549472
type: Gene
SIO_000068: ncbigene

position:13671:1
position: 13671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14813:1
position: 14813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13671-14813:1:exon

J6367_mgp02
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: CYTB
locus tag: J6367_mgp02
codon start: 1
transl table: 2
product: cytochrome b
translation: MAPNIRKSHPLLKMINNSLIDLPAPSNISAWWNFGSLLAVCLMTQILTGLLLAMHYTADTSLAFSSVAHTCRNVQYGWLIRNLHANGASFFFICIFLHIGRGLYYGSYLYKETWNTGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGHTLVEWAWGGFSVDNPTLTRFFALHFLLPFTIAGITIIHLTFLHESGSNNPLGISSDSDKIPFHPYYSFKDILGLTLMLTPFLTLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLILFLIPFLHKSKQRTMTFRPLSQTLFWLLVANLLILTWIGSQPVEHPFIIIGQMASLSYFTILLILFPTIGTLENKMLNY
SIO_010081: J6367_mgp02
subclass of: SO_0000673
so part of: J6367_mgp02
location: 13671..14813
location: region:13671-14813:1
so has part: feature:13671-14813:1:exon

YP_010037851.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13671-14813:1:exon

J6367_mgt20
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt20
so part of: sequence
location: 14817..14885
location: region:14817-14885:1
so has part: feature:14817-14885:1:exon
subclass of: SO_0000663

63549473
type: Gene
SIO_000068: ncbigene

position:14817:1
position: 14817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14885:1
position: 14885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14817-14885:1:exon

J6367_mgt20
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt20
product: tRNA-Thr
SIO_010081: J6367_mgt20
subclass of: SO_0000673
so part of: J6367_mgt20
location: 14817..14885
location: region:14817-14885:1
so has part: feature:14817-14885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14817-14885:1:exon

J6367_mgt21
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt21
so part of: sequence
location: complement(14886..14955)
location: region:14886-14955:-1
so has part: feature:14886-14955:-1:exon
subclass of: SO_0000663

63549496
type: Gene
SIO_000068: ncbigene

position:14886:-1
position: 14886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14955:-1
position: 14955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14886-14955:-1:exon

J6367_mgt21
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt21
product: tRNA-Pro
SIO_010081: J6367_mgt21
subclass of: SO_0000673
so part of: J6367_mgt21
location: complement(14886..14955)
location: region:14886-14955:-1
so has part: feature:14886-14955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14886-14955:-1:exon

J6367_mgp01
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
gene: ND6
locus tag: J6367_mgp01
so part of: sequence
location: complement(14962..15483)
location: region:14962-15483:-1
so has part: feature:14962-15483:-1:exon
subclass of: SO_0000010

63549497
type: Gene
SIO_000068: ncbigene

position:14962:-1
position: 14962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15483:-1
position: 15483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14962-15483:-1:exon

J6367_mgp01
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9031
gene: ND6
locus tag: J6367_mgp01
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTYFVIFLGICFMLGVLAVASNPSPYYGVVGLVVASVMGCGWLVSLGVSFVSLALFLVYLGGMLVVFVYSVSLAADPYPEAWGDWRVVGYGLGFVLVVWMGVVLGGLVDFWKVGVVTVDGGGVSFARLDFSGVAVFYSCGVGLFLVAGWGLLLALFVVLELVRGLSRGAIRAV
SIO_010081: J6367_mgp01
subclass of: SO_0000673
so part of: J6367_mgp01
location: complement(14962..15483)
location: region:14962-15483:-1
so has part: feature:14962-15483:-1:exon

YP_010037852.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14962-15483:-1:exon

J6367_mgt22
type: Gene
subclass of: SO_0000704
RO_0002162: 9031
locus tag: J6367_mgt22
so part of: sequence
location: complement(15486..15553)
location: region:15486-15553:-1
so has part: feature:15486-15553:-1:exon
subclass of: SO_0000663

63549474
type: Gene
SIO_000068: ncbigene

position:15486:-1
position: 15486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15553:-1
position: 15553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15486-15553:-1:exon

J6367_mgt22
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9031
locus tag: J6367_mgt22
product: tRNA-Glu
SIO_010081: J6367_mgt22
subclass of: SO_0000673
so part of: J6367_mgt22
location: complement(15486..15553)
location: region:15486-15553:-1
so has part: feature:15486-15553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15486-15553:-1:exon

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 9031
so part of: sequence
location: 15554..16784
location: region:15554-16784:1
so has part: feature:15554-16784:1:region

position:15554:1
position: 15554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15554-16784:1:region